BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013557
(441 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 195/325 (60%), Gaps = 20/325 (6%)
Query: 45 KRPSGNF-SMPRTECDILSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEH 103
K+P +F +P E + LK F+ EL+ A+ NF +++G GGFG VYKG
Sbjct: 3 KKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----- 57
Query: 104 TLEAARPGVGMVIAVKKLKPEGFQGHK-EWLSEVNYLGQLHHPNLVKLIGFCLDGENRLL 162
R G ++AVK+LK E QG + ++ +EV + H NL++L GFC+ RLL
Sbjct: 58 -----RLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 112
Query: 163 VYEYMPKGSLENHLFRR--GARPLPWTLRIKVAIGAARGLSFLHE-AEQQVIYRDFKASN 219
VY YM GS+ + L R PL W R ++A+G+ARGL++LH+ + ++I+RD KA+N
Sbjct: 113 VYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN 172
Query: 220 ILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGV 279
ILLD EF A + DFGLAK D HV V GT G+ APEYL+TG+ + K DV+ +GV
Sbjct: 173 ILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGV 231
Query: 280 VLLELLSGRRAVDKTRVGAEQN--LVDWAKPYLGDRRKLFRIMDIKLEGQYPQKGAYMVA 337
+LLEL++G+RA D R+ + + L+DW K L + +KL ++D+ L+G Y + +
Sbjct: 232 MLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLI 290
Query: 338 ILALQCISEAKV-RPSMSEVLSALE 361
+AL C + + RP MSEV+ LE
Sbjct: 291 QVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 190/318 (59%), Gaps = 19/318 (5%)
Query: 51 FSMPRTECDILSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARP 110
F +P E + LK F+ EL+ A+ NF +++G GGFG VYKG R
Sbjct: 2 FDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RL 51
Query: 111 GVGMVIAVKKLKPEGFQGHK-EWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPK 169
G ++AVK+LK E QG + ++ +EV + H NL++L GFC+ RLLVY YM
Sbjct: 52 ADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 111
Query: 170 GSLENHLFRR--GARPLPWTLRIKVAIGAARGLSFLHE-AEQQVIYRDFKASNILLDSEF 226
GS+ + L R PL W R ++A+G+ARGL++LH+ + ++I+RD KA+NILLD EF
Sbjct: 112 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171
Query: 227 NAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A + DFGLAK D HV V G G+ APEYL+TG+ + K DV+ +GV+LLEL++
Sbjct: 172 EAVVGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 230
Query: 287 GRRAVDKTRVGAEQN--LVDWAKPYLGDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCI 344
G+RA D R+ + + L+DW K L + +KL ++D+ L+G Y + + +AL C
Sbjct: 231 GQRAFDLARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCT 289
Query: 345 SEAKV-RPSMSEVLSALE 361
+ + RP MSEV+ LE
Sbjct: 290 QSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 182/311 (58%), Gaps = 21/311 (6%)
Query: 61 LSCPNLKAFTFSELKNATRNF--RPDSL----IGEGGFGYVYKGWIDEHTLEAARPGVGM 114
+S +F+F ELKN T NF RP S+ +GEGGFG VYKG+++ T+ + +
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV 66
Query: 115 VIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLEN 174
I ++LK +++ E+ + + H NLV+L+GF DG++ LVY YMP GSL +
Sbjct: 67 DITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 175 HL-FRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDF 233
L G PL W +R K+A GAA G++FLHE I+RD K++NILLD F AK+SDF
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDF 177
Query: 234 GLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDK 293
GLA+A +T + ++++GT Y APE L G +T K D+YSFGVVLLE+++G AVD+
Sbjct: 178 GLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 294 TRVGAEQNLVDWAKPYLGDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCISEAK-VRPS 352
R Q L+D + + + + +D K+ M ++ A QC+ E K RP
Sbjct: 237 HR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV-ASQCLHEKKNKRPD 293
Query: 353 MSEVLSALEQL 363
+ +V L+++
Sbjct: 294 IKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 181/311 (58%), Gaps = 21/311 (6%)
Query: 61 LSCPNLKAFTFSELKNATRNF--RPDSL----IGEGGFGYVYKGWIDEHTLEAARPGVGM 114
+S +F+F ELKN T NF RP S+ +GEGGFG VYKG+++ T+ + +
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV 66
Query: 115 VIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLEN 174
I ++LK +++ E+ + + H NLV+L+GF DG++ LVY YMP GSL +
Sbjct: 67 DITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 175 HL-FRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDF 233
L G PL W +R K+A GAA G++FLHE I+RD K++NILLD F AK+SDF
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDF 177
Query: 234 GLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDK 293
GLA+A +T + +++GT Y APE L G +T K D+YSFGVVLLE+++G AVD+
Sbjct: 178 GLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 294 TRVGAEQNLVDWAKPYLGDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCISEAK-VRPS 352
R Q L+D + + + + +D K+ M ++ A QC+ E K RP
Sbjct: 237 HR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV-ASQCLHEKKNKRPD 293
Query: 353 MSEVLSALEQL 363
+ +V L+++
Sbjct: 294 IKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 21/311 (6%)
Query: 61 LSCPNLKAFTFSELKNATRNF--RPDSL----IGEGGFGYVYKGWIDEHTLEAARPGVGM 114
+S +F+F ELKN T NF RP S+ +GEGGFG VYKG+++ T+ + +
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV 60
Query: 115 VIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLEN 174
I ++LK +++ E+ + + H NLV+L+GF DG++ LVY YMP GSL +
Sbjct: 61 DITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 113
Query: 175 HL-FRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDF 233
L G PL W +R K+A GAA G++FLHE I+RD K++NILLD F AK+SDF
Sbjct: 114 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDF 171
Query: 234 GLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDK 293
GLA+A + + +++GT Y APE L G +T K D+YSFGVVLLE+++G AVD+
Sbjct: 172 GLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDE 230
Query: 294 TRVGAEQNLVDWAKPYLGDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCISEAK-VRPS 352
R Q L+D + + + + +D K+ M ++ A QC+ E K RP
Sbjct: 231 HR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV-ASQCLHEKKNKRPD 287
Query: 353 MSEVLSALEQL 363
+ +V L+++
Sbjct: 288 IKKVQQLLQEM 298
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 168/292 (57%), Gaps = 16/292 (5%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEW 132
+L+ AT NF LIG G FG VYKG + + G +A+K+ PE QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG--ARPLPWTLRI 190
+E+ L HP+LV LIGFC + +L+Y+YM G+L+ HL+ + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
++ IGAARGL +LH + +I+RD K+ NILLD F K++DFG++K G D+TH+
Sbjct: 143 EICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
V GT GY PEY GRLT K DVYSFGVVL E+L R A+ ++ NL +WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES- 259
Query: 311 GDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALE 361
+ +L +I+D L + + A++C++ ++ RPSM +VL LE
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 167/292 (57%), Gaps = 16/292 (5%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEW 132
+L+ AT NF LIG G FG VYKG + + G +A+K+ PE QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG--ARPLPWTLRI 190
+E+ L HP+LV LIGFC + +L+Y+YM G+L+ HL+ + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
++ IGAARGL +LH + +I+RD K+ NILLD F K++DFG++K G +TH+
Sbjct: 143 EICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
V GT GY PEY GRLT K DVYSFGVVL E+L R A+ ++ NL +WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES- 259
Query: 311 GDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALE 361
+ +L +I+D L + + A++C++ ++ RPSM +VL LE
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 144/235 (61%), Gaps = 17/235 (7%)
Query: 68 AFTFSELKNATRNF--RPDSL----IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL 121
+F+F ELKN T NF RP S+ GEGGFG VYKG+++ T+ + + I ++L
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 64
Query: 122 KPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHL-FRRG 180
K +++ E+ + H NLV+L+GF DG++ LVY Y P GSL + L G
Sbjct: 65 K-------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDG 117
Query: 181 ARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGP 240
PL W R K+A GAA G++FLHE I+RD K++NILLD F AK+SDFGLA+A
Sbjct: 118 TPPLSWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 241 TGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTR 295
+ ++++GT Y APE L G +T K D+YSFGVVLLE+++G AVD+ R
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHK--EWLSEVNYLGQLHH 144
IG G FG V++ + H G +AVK L + F + E+L EV + +L H
Sbjct: 45 IGAGSFGTVHRA--EWH---------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP-LPWTLRIKVAIGAARGLSFL 203
PN+V +G N +V EY+ +GSL L + GAR L R+ +A A+G+++L
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYL 263
H +++RD K+ N+L+D ++ K+ DFGL++ S GT + APE L
Sbjct: 154 HNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVL 211
Query: 264 ATGRLTAKCDVYSFGVVLLEL 284
K DVYSFGV+L EL
Sbjct: 212 RDEPSNEKSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHK--EWLSEVNYLGQLHH 144
IG G FG V++ + H G +AVK L + F + E+L EV + +L H
Sbjct: 45 IGAGSFGTVHRA--EWH---------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP-LPWTLRIKVAIGAARGLSFL 203
PN+V +G N +V EY+ +GSL L + GAR L R+ +A A+G+++L
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ-VMGTRGYAAPEY 262
H +++R+ K+ N+L+D ++ K+ DFGL++ + T +S++ GT + APE
Sbjct: 154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS---TFLSSKSAAGTPEWMAPEV 210
Query: 263 LATGRLTAKCDVYSFGVVLLEL 284
L K DVYSFGV+L EL
Sbjct: 211 LRDEPSNEKSDVYSFGVILWEL 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQGHKEWLSEVNYLGQLHHP 145
+GEG FG V + + G G ++AVK LK + G Q W E++ L L+H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 146 NLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+++K G C D GE L LV EY+P GSL ++L R + + A G+++L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYL 133
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTRGYAAPEY 262
H Q I+R+ A N+LLD++ K+ DFGLAKA P G + V + APE
Sbjct: 134 HS--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + DV+SFGV L ELL+
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQGHKEWLSEVNYLGQLHHP 145
+GEG FG V + + G G ++AVK LK + G Q W E++ L L+H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 146 NLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+++K G C D GE L LV EY+P GSL ++L R + + A G+++L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYL 133
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTRGYAAPEY 262
H Q I+R+ A N+LLD++ K+ DFGLAKA P G + V + APE
Sbjct: 134 HA--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + DV+SFGV L ELL+
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 45/292 (15%)
Query: 79 RNFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVN 137
+ + ++G G FG V K W + +A+K+++ E + K ++ E+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 54
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR---IKVAI 194
L +++HPN+VKL G CL+ LV EY GSL N L GA PLP+ + +
Sbjct: 55 QLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCL 110
Query: 195 GAARGLSFLHEAE-QQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVM 252
++G+++LH + + +I+RD K N+LL + K+ DFG A +TH+ T
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNK 165
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGD 312
G+ + APE + KCDV+S+G++L E+++ R+ D+ +G + WA + G
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE--IGGPAFRIMWAV-HNGT 222
Query: 313 RRKLFRIMDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
R L + + +E L +C S + RPSM E++ + L
Sbjct: 223 RPPLIKNLPKPIES------------LMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
+GEG FG V + + G G ++AVK LK + H+ W E++ L L+H
Sbjct: 39 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 146 NLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+++K G C D G L LV EY+P GSL ++L R + + A G+++L
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYL 150
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTRGYAAPEY 262
H Q I+RD A N+LLD++ K+ DFGLAKA P G + V + APE
Sbjct: 151 HA--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + DV+SFGV L ELL+
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 45/292 (15%)
Query: 79 RNFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVN 137
+ + ++G G FG V K W + +A+K+++ E + K ++ E+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 53
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR---IKVAI 194
L +++HPN+VKL G CL+ LV EY GSL N L GA PLP+ + +
Sbjct: 54 QLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCL 109
Query: 195 GAARGLSFLHEAE-QQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVM 252
++G+++LH + + +I+RD K N+LL + K+ DFG A +TH+ T
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNK 164
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGD 312
G+ + APE + KCDV+S+G++L E+++ R+ D+ +G + WA + G
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE--IGGPAFRIMWAV-HNGT 221
Query: 313 RRKLFRIMDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
R L + + +E L +C S + RPSM E++ + L
Sbjct: 222 RPPLIKNLPKPIES------------LMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 145
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTRGYAA 259
FL A ++ ++RD A N +LD +F K++DFGLA+ D H T + A
Sbjct: 146 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 254
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 255 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 40 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 152
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTRGYAA 259
FL A ++ ++RD A N +LD +F K++DFGLA+ D H T + A
Sbjct: 153 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 261
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 262 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 94 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 147
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 206
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTRGYAA 259
FL A ++ ++RD A N +LD +F K++DFGLA+ D H T + A
Sbjct: 207 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 315
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 316 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 137/289 (47%), Gaps = 38/289 (13%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 148
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTRGYAA 259
FL A ++ ++RD A N +LD +F K++DFGLA+ D H T + A
Sbjct: 149 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGA----EQNLVDWAKPYLGDRRK 315
E L T + T K DV+SFGV+L EL+ TR GA + N D YL R+
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELM--------TR-GAPPYPDVNTFD-ITVYLLQGRR 256
Query: 316 LFRIMDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 257 L-------LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 147
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTRGYAA 259
FL A ++ ++RD A N +LD +F K++DFGLA+ D H T + A
Sbjct: 148 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 256
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 257 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 148
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTRGYAA 259
FL A ++ ++RD A N +LD +F K++DFGLA+ D H T + A
Sbjct: 149 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 257
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 258 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 147
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTRGYAA 259
FL A ++ ++RD A N +LD +F K++DFGLA+ D H T + A
Sbjct: 148 FL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 256
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 257 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 115/219 (52%), Gaps = 19/219 (8%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG+GGFG V+KG + + ++ A + +++ + + E + +E+ EV + L+HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VKL G + +V E++P G L + L + A P+ W++++++ + A G+ ++
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 206 AEQQVIYRDFKASNILLDS-----EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+++RD ++ NI L S AK++DFGL++ H + ++G + AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-----VHSVSGLLGNFQWMAP 195
Query: 261 EYLATGR--LTAKCDVYSFGVVLLELLSGRRAVDKTRVG 297
E + T K D YSF ++L +L+G D+ G
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 114/232 (49%), Gaps = 38/232 (16%)
Query: 84 DSLIGEGGFGYVYKG-WI-DEHTLEAAR--PGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ +IG GGFG VY+ WI DE ++AAR P + ++ ++ E
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVR-----------QEAKLF 60
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L HPN++ L G CL N LV E+ G L L + +P + + A+ ARG
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARG 117
Query: 200 LSFLH-EAEQQVIYRDFKASNILLDSEFN--------AKLSDFGLAKAGPTGDRTHVSTQ 250
+++LH EA +I+RD K+SNIL+ + K++DFGLA+ H +T+
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTK 171
Query: 251 VMGTRGYA--APEYLATGRLTAKCDVYSFGVVLLELLSGR---RAVDKTRVG 297
+ YA APE + + DV+S+GV+L ELL+G R +D V
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA 223
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLHHP 145
+GEG FG V D G +AVK LKPE H + E+ L L+H
Sbjct: 29 LGEGHFGKVELCRYDPEG-----DNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 146 NLVKLIGFCL-DGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
N+VK G C DG N + L+ E++P GSL+ +L + + ++K A+ +G+ +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG-DRTHVSTQVMGTRGYAAPEY 262
+Q ++RD A N+L++SE K+ DFGL KA T + V + APE
Sbjct: 143 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + DV+SFGV L ELL+
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 28/237 (11%)
Query: 66 LKAFTFSELKNATRNF---------RPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVI 116
+ FTF + A R F + + +IG G FG V G + L R + +
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHL---KLPGKRE---IFV 64
Query: 117 AVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLEN 174
A+K LK G+ + +++LSE + +GQ HPN++ L G +++ E+M GSL++
Sbjct: 65 AIKTLK-SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 175 HLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFG 234
L R+ + + G A G+ +L A+ ++RD A NIL++S K+SDFG
Sbjct: 124 FL-RQNDGQFTVIQLVGMLRGIAAGMKYL--ADMNYVHRDLAARNILVNSNLVCKVSDFG 180
Query: 235 LAK--AGPTGDRTHVSTQVMGTR---GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
L++ T D T+ T +G + + APE + + T+ DV+S+G+V+ E++S
Sbjct: 181 LSRFLEDDTSDPTY--TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLHHP 145
+GEG FG V D G +AVK LKPE H + E+ L L+H
Sbjct: 17 LGEGHFGKVELCRYDPEG-----DNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 146 NLVKLIGFCL-DGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
N+VK G C DG N + L+ E++P GSL+ +L + + ++K A+ +G+ +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG-DRTHVSTQVMGTRGYAAPEY 262
+Q ++RD A N+L++SE K+ DFGL KA T + V + APE
Sbjct: 131 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + DV+SFGV L ELL+
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 114/219 (52%), Gaps = 19/219 (8%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG+GGFG V+KG + + ++ A + +++ + + E + +E+ EV + L+HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VKL G + +V E++P G L + L + A P+ W++++++ + A G+ ++
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 206 AEQQVIYRDFKASNILLDS-----EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+++RD ++ NI L S AK++DFG ++ H + ++G + AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS-----VHSVSGLLGNFQWMAP 195
Query: 261 EYLATGR--LTAKCDVYSFGVVLLELLSGRRAVDKTRVG 297
E + T K D YSF ++L +L+G D+ G
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 114/219 (52%), Gaps = 19/219 (8%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG+GGFG V+KG + + ++ A + +++ + + E + +E+ EV + L+HP
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VKL G + +V E++P G L + L + A P+ W++++++ + A G+ ++
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 206 AEQQVIYRDFKASNILLDS-----EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+++RD ++ NI L S AK++DF L++ H + ++G + AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-----VHSVSGLLGNFQWMAP 195
Query: 261 EYLATGR--LTAKCDVYSFGVVLLELLSGRRAVDKTRVG 297
E + T K D YSF ++L +L+G D+ G
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 130/254 (51%), Gaps = 34/254 (13%)
Query: 48 SGNFSMP--RTECD--ILSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEH 103
+G+ +P RT D P F++ +AT N D ++G G FG V G +
Sbjct: 11 NGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--- 66
Query: 104 TLEAARPGVGMVIAVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRL 161
L + + + +A+K LK G+ + +++L E + +GQ HPN+++L G + +
Sbjct: 67 KLPSKKE---ISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
+V EYM GSL++ L + A+ L + + G A G+ +L ++ ++RD A NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGMKYL--SDMGYVHRDLAARNIL 179
Query: 222 LDSEFNAKLSDFGLAKA---GPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKC 272
++S K+SDFGLA+ P T TRG + +PE +A + T+
Sbjct: 180 INSNLVCKVSDFGLARVLEDDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 273 DVYSFGVVLLELLS 286
DV+S+G+VL E++S
Sbjct: 232 DVWSYGIVLWEVMS 245
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 37/312 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNY 138
R ++G G FG V+KG WI E E+ + V + + K + FQ + + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEG--ESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI-- 87
Query: 139 LGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR-RGARPLPWTLRIKVAIGAA 197
G L H ++V+L+G C G + LV +Y+P GSL +H+ + RGA L L + + A
Sbjct: 88 -GSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIA 143
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+ +L E +++R+ A N+LL S +++DFG+A P D+ + ++ +
Sbjct: 144 KGMYYLEE--HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLF 317
A E + G+ T + DV+S+GV + EL++ GAE PY G R L
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMT---------FGAE--------PYAGLR--LA 242
Query: 318 RIMDIKLEGQ---YPQKGAYMVAILALQC-ISEAKVRPSMSEVLSALEQLP--PPRDPAS 371
+ D+ +G+ PQ V ++ ++C + + +RP+ E+ + ++ PPR
Sbjct: 243 EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVI 302
Query: 372 PSNSDPQVIYSP 383
S P + P
Sbjct: 303 KRESGPGIAPGP 314
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 134 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 191
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 30 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 78
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 79 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 136
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 137 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 194
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 29 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 77
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 78 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 135
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 136 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 193
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGR 216
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQGHKEWLSEVNYLGQLHHP 145
+GEG FG V + + G G ++AVK LK G Q W E+ L L+H
Sbjct: 17 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 146 NLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
++VK G C D GE + LV EY+P GSL ++L R L A G+++L
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---FAQQICEGMAYL 128
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTRGYAAPEY 262
H Q I+R A N+LLD++ K+ DFGLAKA P G + V + APE
Sbjct: 129 HA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + DV+SFGV L ELL+
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 128 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 185
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 23 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 71
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 72 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 129
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 130 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 187
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGR 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQGHKEWLSEVNYLGQLHHP 145
+GEG FG V + + G G ++AVK LK G Q W E+ L L+H
Sbjct: 16 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 146 NLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
++VK G C D GE + LV EY+P GSL ++L R L A G+++L
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---FAQQICEGMAYL 127
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTH-VSTQVMGTRGYAAPEY 262
H Q I+R A N+LLD++ K+ DFGLAKA P G + V + APE
Sbjct: 128 HA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + DV+SFGV L ELL+
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 37/312 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNY 138
R ++G G FG V+KG WI E E+ + V + + K + FQ + + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEG--ESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI-- 69
Query: 139 LGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR-RGARPLPWTLRIKVAIGAA 197
G L H ++V+L+G C G + LV +Y+P GSL +H+ + RGA L L + + A
Sbjct: 70 -GSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIA 125
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+ +L E +++R+ A N+LL S +++DFG+A P D+ + ++ +
Sbjct: 126 KGMYYLEE--HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLF 317
A E + G+ T + DV+S+GV + EL++ GAE PY G R L
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMT---------FGAE--------PYAGLR--LA 224
Query: 318 RIMDIKLEGQ---YPQKGAYMVAILALQC-ISEAKVRPSMSEVLSALEQLP--PPRDPAS 371
+ D+ +G+ PQ V ++ ++C + + +RP+ E+ + ++ PPR
Sbjct: 225 EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVI 284
Query: 372 PSNSDPQVIYSP 383
S P + P
Sbjct: 285 KRESGPGIAPGP 296
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 34/254 (13%)
Query: 48 SGNFSMP--RTECD--ILSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEH 103
+G+ +P RT D P F++ +AT N D ++G G FG V G +
Sbjct: 11 NGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--- 66
Query: 104 TLEAARPGVGMVIAVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRL 161
L + + + +A+K LK G+ + +++L E + +GQ HPN+++L G + +
Sbjct: 67 KLPSKKE---ISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
+V EYM GSL++ L + A+ L + + G A G+ +L ++ ++RD A NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGMKYL--SDMGYVHRDLAARNIL 179
Query: 222 LDSEFNAKLSDFGLAKA---GPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKC 272
++S K+SDFGL++ P T TRG + +PE +A + T+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 273 DVYSFGVVLLELLS 286
DV+S+G+VL E++S
Sbjct: 232 DVWSYGIVLWEVMS 245
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG V+ G W+++ +A+K ++ EG ++++ E + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G CL+ LV+E+M G L ++L + TL + + + G+++L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 121
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
A VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 122 A--SVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
R ++K DV+SFGV++ E+ S
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 31 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 79
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 80 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 137
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 138 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYG 195
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 134 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYG 191
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 146
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ H T + A
Sbjct: 147 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 255
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 256 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 166
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ + H T + A
Sbjct: 167 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 275
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 276 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 26 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 74
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 75 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 132
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 133 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYG 190
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 165
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ + H T + A
Sbjct: 166 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 274
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 275 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 22 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 70
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 71 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 128
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 129 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 186
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGR 209
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 128 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTAPEAINYG 185
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 34/254 (13%)
Query: 48 SGNFSMP--RTECD--ILSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEH 103
+G+ +P RT D P F++ +AT N D ++G G FG V G +
Sbjct: 11 NGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--- 66
Query: 104 TLEAARPGVGMVIAVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRL 161
L + + + +A+K LK G+ + +++L E + +GQ HPN+++L G + +
Sbjct: 67 KLPSKKE---ISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
+V EYM GSL++ L + A+ L + + G A G+ +L ++ ++RD A NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGMKYL--SDMGFVHRDLAARNIL 179
Query: 222 LDSEFNAKLSDFGLAKA---GPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKC 272
++S K+SDFGL++ P T TRG + +PE +A + T+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 273 DVYSFGVVLLELLS 286
DV+S+G+VL E++S
Sbjct: 232 DVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 122/234 (52%), Gaps = 30/234 (12%)
Query: 64 PNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP 123
P F++ +AT N D ++G G FG V G + L + + + +A+K LK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL---KLPSKKE---ISVAIKTLKV 83
Query: 124 EGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA 181
G+ + +++L E + +GQ HPN+++L G + ++V EYM GSL++ L + A
Sbjct: 84 -GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA--- 238
+ L + + G A G+ +L ++ ++RD A NIL++S K+SDFGL++
Sbjct: 143 QFTVIQL-VGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 239 GPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
P T TRG + +PE +A + T+ DV+S+G+VL E++S
Sbjct: 200 DPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 28/233 (12%)
Query: 69 FTFSELKNATRNF---------RPDSLIGEGGFGYVYKGWIDEHTLEAARPGV-GMVIAV 118
FTF + A R F + + +IG G FG V G PG + +A+
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSG-------RLKVPGKREICVAI 62
Query: 119 KKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHL 176
K LK G+ + +++LSE + +GQ HPN++ L G + +++ EYM GSL+ L
Sbjct: 63 KTLKA-GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
Query: 177 FRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA 236
+ R L + + G G+ +L ++ ++RD A NIL++S K+SDFG++
Sbjct: 122 RKNDGRFTVIQL-VGMLRGIGSGMKYL--SDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 237 KAGPTGDRTHVSTQVMGTR---GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ D + G + + APE +A + T+ DV+S+G+V+ E++S
Sbjct: 179 RV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 16 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 64
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 65 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 122
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 123 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYG 180
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGR 203
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 34/254 (13%)
Query: 48 SGNFSMP--RTECD--ILSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEH 103
+G+ +P RT D P F++ +AT N D ++G G FG V G +
Sbjct: 11 NGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--- 66
Query: 104 TLEAARPGVGMVIAVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRL 161
L + + + +A+K LK G+ + +++L E + +GQ HPN+++L G + +
Sbjct: 67 KLPSKKE---ISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
+V EYM GSL++ L + A+ L + + G A G+ +L ++ ++RD A NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGMKYL--SDMGYVHRDLAARNIL 179
Query: 222 LDSEFNAKLSDFGLAKA---GPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKC 272
++S K+SDFGL++ P T TRG + +PE +A + T+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 273 DVYSFGVVLLELLS 286
DV+S+G+VL E++S
Sbjct: 232 DVWSYGIVLWEVMS 245
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 147
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ + H T + A
Sbjct: 148 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 256
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 257 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 142
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ + H T + A
Sbjct: 143 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 251
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 252 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 27 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 139
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ + H T + A
Sbjct: 140 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 248
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 249 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG V+ G W+++ +A+K +K EG +++ E + +L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-----------VAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G CL+ LV+E+M G L ++L + TL + + + G+++L E
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 141
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
A VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 142 A--CVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 198
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
R ++K DV+SFGV++ E+ S
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFS 219
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 144
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ + H T + A
Sbjct: 145 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 253
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 254 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 122/234 (52%), Gaps = 30/234 (12%)
Query: 64 PNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP 123
P F++ +AT N D ++G G FG V G + L + + + +A+K LK
Sbjct: 29 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL---KLPSKKE---ISVAIKTLKV 81
Query: 124 EGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA 181
G+ + +++L E + +GQ HPN+++L G + ++V EYM GSL++ L + A
Sbjct: 82 -GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 140
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA--- 238
+ L + + G A G+ +L ++ ++RD A NIL++S K+SDFGL++
Sbjct: 141 QFTVIQL-VGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 239 GPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
P T TRG + +PE +A + T+ DV+S+G+VL E++S
Sbjct: 198 DPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 122/234 (52%), Gaps = 30/234 (12%)
Query: 64 PNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP 123
P F++ +AT N D ++G G FG V G + L + + + +A+K LK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL---KLPSKKE---ISVAIKTLKV 83
Query: 124 EGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA 181
G+ + +++L E + +GQ HPN+++L G + ++V EYM GSL++ L + A
Sbjct: 84 -GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA--- 238
+ L + + G A G+ +L ++ ++RD A NIL++S K+SDFGL++
Sbjct: 143 QFTVIQL-VGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 239 GPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
P T TRG + +PE +A + T+ DV+S+G+VL E++S
Sbjct: 200 DPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG V+ G W+++ +A+K ++ EG ++++ E + +L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G CL+ LV+E+M G L ++L + TL + + + G+++L E
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 119
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
A VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 120 A--CVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 176
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
R ++K DV+SFGV++ E+ S
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFS 197
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 147
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ + H T + A
Sbjct: 148 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 256
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 257 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG V+ G W+++ +A+K ++ EG ++++ E + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G CL+ LV+E+M G L ++L + TL + + + G+++L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 121
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
A VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 122 A--CVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
R ++K DV+SFGV++ E+ S
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 146
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ + H T + A
Sbjct: 147 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 255
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 256 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 128 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYG 185
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 30/285 (10%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL 142
+ +IG G FG VY G + ++ G + AVK L G ++L+E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 143 HHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HPN++ L+G CL E L+V YM G L N + P L I + A+G+
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMK 145
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGYAA 259
+L A ++ ++RD A N +LD +F K++DFGLA+ + H T + A
Sbjct: 146 YL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRI 319
E L T + T K DV+SFGV+L EL++ R A V V YL R+L
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-----YLLQGRRL--- 254
Query: 320 MDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
L+ +Y Y V L+C +A++RPS SE++S + +
Sbjct: 255 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 28/251 (11%)
Query: 48 SGNFSMP--RTECD--ILSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEH 103
+G+ +P RT D P F++ +AT N D ++G G FG V G +
Sbjct: 11 NGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--- 66
Query: 104 TLEAARPGVGMVIAVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRL 161
L + + + +A+K LK G+ + +++L E + +GQ HPN+++L G + +
Sbjct: 67 KLPSKKE---ISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
+V EYM GSL++ L + A+ L + + G A G+ +L ++ ++RD A NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGMKYL--SDMGYVHRDLAARNIL 179
Query: 222 LDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKCDVY 275
++S K+SDFGL + + TRG + +PE +A + T+ DV+
Sbjct: 180 INSNLVCKVSDFGLGRVLEDDPEAAYT-----TRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 276 SFGVVLLELLS 286
S+G+VL E++S
Sbjct: 235 SYGIVLWEVMS 245
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG V+ G W+++ +A+K ++ EG ++++ E + +L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G CL+ LV+E+M G L ++L + TL + + + G+++L E
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 124
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
A VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 125 A--CVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 181
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
R ++K DV+SFGV++ E+ S
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFS 202
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 30/227 (13%)
Query: 71 FSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF--QG 128
F++ +AT N D ++G G FG V G + L + + + +A+K LK G+ +
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRL---KLPSKKE---ISVAIKTLKV-GYTEKQ 60
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTL 188
+++L E + +GQ HPN+++L G + ++V EYM GSL++ L + A+ L
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 120
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA---GPTGDRT 245
+ + G A G+ +L ++ ++RD A NIL++S K+SDFGL++ P T
Sbjct: 121 -VGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 246 HVSTQVMGTRG------YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
TRG + +PE +A + T+ DV+S+G+VL E++S
Sbjct: 178 --------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 30/227 (13%)
Query: 71 FSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF--QG 128
F++ +AT N D ++G G FG V G + L + + + +A+K LK G+ +
Sbjct: 26 FAKELDAT-NISIDKVVGAGEFGEVCSGRL---KLPSKKE---ISVAIKTLKV-GYTEKQ 77
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTL 188
+++L E + +GQ HPN+++L G + ++V EYM GSL++ L + A+ L
Sbjct: 78 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 137
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA---GPTGDRT 245
+ + G A G+ +L ++ ++RD A NIL++S K+SDFGL++ P T
Sbjct: 138 -VGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 246 HVSTQVMGTRG------YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
TRG + +PE +A + T+ DV+S+G+VL E++S
Sbjct: 195 --------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVG-MVIAVKKLKPEGF--QGHKEWLSEVNYLG 140
+ +IG G FG V +G L+A PG +A+K LK G+ + +E+LSE + +G
Sbjct: 21 EEVIGAGEFGEVCRG-----RLKA--PGKKESCVAIKTLKG-GYTERQRREFLSEASIMG 72
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
Q HPN+++L G + +++ E+M G+L++ L R + + G A G+
Sbjct: 73 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGM 131
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR---GY 257
+L AE ++RD A NIL++S K+SDFGL++ T +G + +
Sbjct: 132 RYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRW 189
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
APE +A + T+ D +S+G+V+ E++S
Sbjct: 190 TAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ ++HT +AVK +KP G + +L+E N + L H
Sbjct: 23 LGAGQFGEVWMATYNKHT----------KVAVKTMKP-GSMSVEAFLAEANVMKTLQHDK 71
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LVKL + E ++ E+M KGSL + L P I + A G++F+ +
Sbjct: 72 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ- 129
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 130 -RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFG 187
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L+E+++ R
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGR 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ ++HT +AVK +KP G + +L+E N + L H
Sbjct: 196 LGAGQFGEVWMATYNKHT----------KVAVKTMKP-GSMSVEAFLAEANVMKTLQHDK 244
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LVKL + E ++ E+M KGSL + L P I + A G++F+ +
Sbjct: 245 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ- 302
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 303 -RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAINFG 360
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L+E+++ R
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGR 383
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 17 LGAGQFGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 65
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 66 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 123
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+R+ +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 124 -RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK-WTAPEAINYG 181
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGR 204
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 17 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 129
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 187
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVG-MVIAVKKLKPEGF--QGHKEWLSEVNYLG 140
+ +IG G FG V +G L+A PG +A+K LK G+ + +E+LSE + +G
Sbjct: 19 EEVIGAGEFGEVCRG-----RLKA--PGKKESCVAIKTLKG-GYTERQRREFLSEASIMG 70
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
Q HPN+++L G + +++ E+M G+L++ L R + + G A G+
Sbjct: 71 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGM 129
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR---GY 257
+L AE ++RD A NIL++S K+SDFGL++ T +G + +
Sbjct: 130 RYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW 187
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
APE +A + T+ D +S+G+V+ E++S
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 22 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 134
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 192
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 130
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 133
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 16 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 128
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 186
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 130
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPES 188
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 24 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 136
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 194
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 49 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 161
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 219
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 25 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 137
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 195
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 23 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 135
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 193
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 18 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 130
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG V+ G W+++ +A+K ++ EG ++++ E + +L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-----------VAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G CL+ LV E+M G L ++L + TL + + + G+++L E
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
A VI+RD A N L+ K+SDFG+ + D+ ST +A+PE +
Sbjct: 123 A--CVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSF 179
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
R ++K DV+SFGV++ E+ S
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFS 200
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 142/300 (47%), Gaps = 32/300 (10%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHK-EWLSEVNYLGQLHH 144
+IG G FG VYKG + + + P +A+K LK + + ++L E +GQ H
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
N+++L G + +++ EYM G+L+ L + L + + G A G+ +L
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYL- 163
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG-DRTHVSTQVMGTRGYAAPEYL 263
A ++RD A NIL++S K+SDFGL++ + T+ ++ + APE +
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 264 ATGRLTAKCDVYSFGVVLLELLS-GRRAVDKTRVGAEQNLVDWAKPYLG-DRRKLFRIMD 321
+ + T+ DV+SFG+V+ E+++ G R PY ++ + ++
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGER------------------PYWELSNHEVMKAIN 264
Query: 322 IKLEGQYPQKGAYMVAILALQCISEAKV-RPSMSEVLSALEQLP-PPRDPASPSNSDPQV 379
P + L +QC + + RP ++++S L++L P + ++ DP+V
Sbjct: 265 DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRV 324
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 36 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 148
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 129/254 (50%), Gaps = 34/254 (13%)
Query: 48 SGNFSMP--RTECD--ILSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEH 103
+G+ +P RT D P F++ +AT N D ++G G FG V G +
Sbjct: 11 NGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL--- 66
Query: 104 TLEAARPGVGMVIAVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRL 161
L + + + +A+K LK G+ + +++L E + +GQ HPN+++L G + +
Sbjct: 67 KLPSKKE---ISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
+V E M GSL++ L + A+ L + + G A G+ +L ++ ++RD A NIL
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGMKYL--SDMGAVHRDLAARNIL 179
Query: 222 LDSEFNAKLSDFGLAKA---GPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKC 272
++S K+SDFGL++ P T TRG + +PE +A + T+
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 273 DVYSFGVVLLELLS 286
DV+S+G+VL E++S
Sbjct: 232 DVWSYGIVLWEVMS 245
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G G V+ G+ + HT +AVK LK +G +L+E N + QL H
Sbjct: 21 LGAGQAGEVWMGYYNGHT----------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E ++ EYM GSL + L L + +A A G++F+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ + T + + APE + G
Sbjct: 128 -RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTAPEAINYG 185
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L E+++ R
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 25/203 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ ++HT +AVK +KP G + +L+E N + L H
Sbjct: 190 LGAGQFGEVWMATYNKHT----------KVAVKTMKP-GSMSVEAFLAEANVMKTLQHDK 238
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LVKL + E ++ E+M KGSL + L P I + A G++F+ +
Sbjct: 239 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ- 296
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD +A+NIL+ + K++DFGLA+ G + APE + G
Sbjct: 297 -RNYIHRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFG 344
Query: 267 RLTAKCDVYSFGVVLLELLSGRR 289
T K DV+SFG++L+E+++ R
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGR 367
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 36 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 148
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+GEG FG V+ + + L + M++AVK LK K++ E L L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTKDK--MLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLF--------------RRGARPLPWTLRIKV 192
+VK G C DG+ ++V+EYM G L L R+ L + + +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
A A G+ +L A Q ++RD N L+ + K+ DFG+++ + D V M
Sbjct: 139 ASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ PE + + T + DV+SFGV+L E+ +
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 79 RNFRPDSLI-----GEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL 133
R FRP LI G+G FG ++ G V+ +K+L + + +L
Sbjct: 5 RIFRPSDLIHGEVLGKGCFG---------QAIKVTHRETGEVMVMKELIRFDEETQRTFL 55
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV + L HPN++K IG + + EY+ G+L + + PW+ R+ A
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFA 114
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA------KAGPTG----- 242
A G+++LH +I+RD + N L+ N ++DFGLA K P G
Sbjct: 115 KDIASGMAYLH--SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 243 --DRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVD 292
DR T V+G + APE + K DV+SFG+VL E++ GR D
Sbjct: 173 KPDRKKRYT-VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L R L ++ +G+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL-LQYTSQICKGMEYL- 133
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 19 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ EY+P GSL ++L + R L ++ +G+ +L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL- 131
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+R+ NIL+++E K+ DFGL K P D+ + + G + APE
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPES 189
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 121/234 (51%), Gaps = 30/234 (12%)
Query: 64 PNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP 123
P F++ +AT N D ++G G FG V G + L + + + +A+K LK
Sbjct: 31 PTQTVHEFAKELDAT-NISIDKVVGAGEFGEVCSGRL---KLPSKKE---ISVAIKTLKV 83
Query: 124 EGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA 181
G+ + +++L E + +GQ HPN+++L G + ++V E M GSL++ L + A
Sbjct: 84 -GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 142
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA--- 238
+ L + + G A G+ +L ++ ++RD A NIL++S K+SDFGL++
Sbjct: 143 QFTVIQL-VGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 239 GPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
P T TRG + +PE +A + T+ DV+S+G+VL E++S
Sbjct: 200 DPEAAYT--------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 108/211 (51%), Gaps = 21/211 (9%)
Query: 84 DSLIGEGGFGYVYKG-WIDE--HTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
D +IG+G FG VY G +ID+ + ++ A + + ++++ E F L E +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV--EAF------LREGLLMR 77
Query: 141 QLHHPNLVKLIGFCLDGENR-LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN++ LIG L E ++ YM G L + P L I + ARG
Sbjct: 78 GLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARG 136
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR---- 255
+ +L AEQ+ ++RD A N +LD F K++DFGLA+ DR + S Q
Sbjct: 137 MEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQHRHARLPV 192
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ A E L T R T K DV+SFGV+L ELL+
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 120/227 (52%), Gaps = 30/227 (13%)
Query: 71 FSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF--QG 128
F++ +AT N D ++G G FG V G + L + + + +A+K LK G+ +
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRL---KLPSKKE---ISVAIKTLKV-GYTEKQ 60
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTL 188
+++L E + +GQ HPN+++L G + ++V E M GSL++ L + A+ L
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 120
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA---GPTGDRT 245
+ + G A G+ +L ++ ++RD A NIL++S K+SDFGL++ P T
Sbjct: 121 -VGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 246 HVSTQVMGTRG------YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
TRG + +PE +A + T+ DV+S+G+VL E++S
Sbjct: 178 --------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GLSF H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 111 QLLQGLSFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG V D + G V+AVKKL+ + +++ E+ L L H N
Sbjct: 21 LGKGNFGSVEMCRYD-----PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 147 LVKLIGFCLDG--ENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
+VK G C N L+ E++P GSL +L + R L ++ +G+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-LQYTSQICKGMEYL- 133
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPEY 262
++ I+RD NIL+++E K+ DFGL K P D+ + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
L + + DV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 23/206 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G FG V G G +AVK +K + + +L+E + + QL H N
Sbjct: 201 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 147 LVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L+G ++ + L +V EYM KGSL ++L RG L +K ++ + +L
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++RD A N+L+ + AK+SDFGL K A T D + + + APE L
Sbjct: 308 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 359
Query: 265 TGRLTAKCDVYSFGVVLLELLSGRRA 290
+ + K DV+SFG++L E+ S R
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRV 385
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 116/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 49
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L++ + +P L
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKS 107
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 108 YLFQLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 23/206 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G FG V G G +AVK +K + + +L+E + + QL H N
Sbjct: 14 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 147 LVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L+G ++ + L +V EYM KGSL ++L RG L +K ++ + +L
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++RD A N+L+ + AK+SDFGL K A T D + + + APE L
Sbjct: 121 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 172
Query: 265 TGRLTAKCDVYSFGVVLLELLSGRRA 290
+ + K DV+SFG++L E+ S R
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 23/206 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G FG V G G +AVK +K + + +L+E + + QL H N
Sbjct: 29 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 147 LVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L+G ++ + L +V EYM KGSL ++L RG L +K ++ + +L
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++RD A N+L+ + AK+SDFGL K A T D + + + APE L
Sbjct: 136 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 187
Query: 265 TGRLTAKCDVYSFGVVLLELLSGRRA 290
+ + K DV+SFG++L E+ S R
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRV 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+GEG +G VYK A G ++A+K++ E +E + E++ + Q P+
Sbjct: 37 LGEGSYGSVYK---------AIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
+VK G + +V EY GS+ + + R + L + +GL +LH
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
+ I+RD KA NILL++E +AKL+DFG+ AG D V+GT + APE +
Sbjct: 145 RK--IHRDIKAGNILLNTEGHAKLADFGV--AGQLTDXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 267 RLTAKCDVYSFGVVLLELLSGR 288
D++S G+ +E+ G+
Sbjct: 201 GYNCVADIWSLGITAIEMAEGK 222
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 19/212 (8%)
Query: 82 RPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF--QGHKEWLSEVNYL 139
+ + +IG G FG V G + L R + +A+K LK G+ + +++LSE + +
Sbjct: 10 KIEQVIGAGEFGEVCSGHL---KLPGKRE---IFVAIKTLK-SGYTEKQRRDFLSEASIM 62
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
GQ HPN++ L G +++ E+M GSL++ L R+ + + G A G
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAG 121
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTR-- 255
+ +L A+ ++R A NIL++S K+SDFGL++ T D T+ T +G +
Sbjct: 122 MKYL--ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY--TSALGGKIP 177
Query: 256 -GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + + T+ DV+S+G+V+ E++S
Sbjct: 178 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 110 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 116/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 50
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 108
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T
Sbjct: 109 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 164
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
+ T Y APE L + + D++S G + E+++ RRA+
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 110 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 11 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 60 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 117
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 118 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 173
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 11 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 60 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 117
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 118 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 173
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGV-GMVIAVKKLKPEGF--QGHKEWLSEVN 137
+ + +IG G FG V G PG + +A+K LK G+ + +++LSE +
Sbjct: 16 IKIEKVIGVGEFGEVCSG-------RLKVPGKREICVAIKTLKA-GYTDKQRRDFLSEAS 67
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+GQ HPN++ L G + +++ EYM GSL+ L + R L + + G
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRGIG 126
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG- 256
G+ +L ++ ++RD A NIL++S K+SDFG+++ + TRG
Sbjct: 127 SGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT-----TRGG 179
Query: 257 -----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE +A + T+ DV+S+G+V+ E++S
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 8 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 57 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 114
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 115 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 170
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 19/212 (8%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGV-GMVIAVKKLKPEGF--QGHKEWLSEVN 137
+ + +IG G FG V G PG + +A+K LK G+ + +++LSE +
Sbjct: 10 IKIEKVIGVGEFGEVCSG-------RLKVPGKREICVAIKTLKA-GYTDKQRRDFLSEAS 61
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+GQ HPN++ L G + +++ EYM GSL+ L + R L + + G
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRGIG 120
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR-- 255
G+ +L ++ ++RD A NIL++S K+SDFG+++ D + G +
Sbjct: 121 SGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV--LEDDPEAAYTTRGGKIP 176
Query: 256 -GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE +A + T+ DV+S+G+V+ E++S
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 51
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ L++ + +P L
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKS 109
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 110 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 52
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ L++ + +P L
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKS 110
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 111 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 11/176 (6%)
Query: 116 IAVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLE 173
+A+K LK G+ + +++LSE + +GQ HPN+++L G G ++V EYM GSL+
Sbjct: 80 VAIKALKA-GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 174 NHLFRRGARPLPWTLRIKVAIGAARGL--SFLHEAEQQVIYRDFKASNILLDSEFNAKLS 231
L R I +G RG+ + ++ ++RD A N+L+DS K+S
Sbjct: 139 TFL-----RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 232 DFGLAKAGPTG-DRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
DFGL++ D + +T + APE +A ++ DV+SFGVV+ E+L+
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 49
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 107
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 108 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 49
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 107
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 108 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 64 PNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP 123
PN F++ +A+ + + +IG G FG V G + L R + +A+K LK
Sbjct: 29 PNRAVHQFAKELDAS-CIKIERVIGAGEFGEVCSGRL---KLPGKRD---VAVAIKTLKV 81
Query: 124 EGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA 181
G+ + +++L E + +GQ HPN+V L G G+ ++V E+M G+L+ L +
Sbjct: 82 -GYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG 140
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ L + + G A G+ +L A+ ++RD A NIL++S K+SDFGL++
Sbjct: 141 QFTVIQL-VGMLRGIAAGMRYL--ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-IE 196
Query: 242 GDRTHVSTQVMGT--RGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
D V T G + APE + + T+ DV+S+G+V+ E++S
Sbjct: 197 DDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 49
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 107
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 108 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 50
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 108
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 109 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G FG V G G +AVK +K + + +L+E + + QL H N
Sbjct: 20 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 66
Query: 147 LVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L+G ++ + L +V EYM KGSL ++L RG L +K ++ + +L
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++RD A N+L+ + AK+SDFGL K A T D + + + APE L
Sbjct: 127 --NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 178
Query: 265 TGRLTAKCDVYSFGVVLLELLSGRRA 290
+ K DV+SFG++L E+ S R
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 52
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 110
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 111 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 51
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 109
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 110 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 49
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 107
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 108 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 51
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 109
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 110 YLFQLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 51
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 52 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 109
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 110 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V T
Sbjct: 110 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 52
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKS 110
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 111 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V T
Sbjct: 110 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 114/221 (51%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 52
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ L+ + +P L
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKS 110
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 111 YLFQLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + T +AVK LKP G + +L E N + L H
Sbjct: 21 LGAGQFGEVWMGYYNNST----------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 69
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR--GARPLPWTLRIKVAIGAARGLSFLH 204
LV+L E ++ EYM KGSL + L G LP + I A G++++
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 127
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
+ I+RD +A+N+L+ K++DFGLA+ + T + + APE +
Sbjct: 128 R--KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAIN 184
Query: 265 TGRLTAKCDVYSFGVVLLELLS 286
G T K DV+SFG++L E+++
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVT 206
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNY 138
R+ + S +G+G FG V D G ++AVK+L+ G +++ E+
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 139 LGQLHHPNLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGA 196
L LH +VK G G L LV EY+P G L + L R AR L + + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 123
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR- 255
+G+ +L ++ ++RD A NIL++SE + K++DFGLAK P D+ + + G
Sbjct: 124 CKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 180
Query: 256 -GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L+ + + DV+SFGVVL EL +
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 19 LGGGQFGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 186 KFSIKSDVWAFGVLLWEI 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 50
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 108
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 109 YLFQLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 52
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 110
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 111 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF---QGHKEWLSE 135
++ R +G+G FG V +G D A G + +AVK LKP+ + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
VN + L H NL++L G L ++ V E P GSL + L + L TL + A+
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQ 123
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 254
A G+ +L ++ I+RD A N+LL + K+ DFGL +A P D +V +
Sbjct: 124 VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L T + D + FGV L E+ +
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 32/225 (14%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNY 138
+ + +IGEG FG V K I + G+ M A+K++K + H+++ E+
Sbjct: 26 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 139 LGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR--------------GARP 183
L +L HHPN++ L+G C L EY P G+L + L + A
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 184 LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
L + A ARG+ +L +++Q I+RD A NIL+ + AK++DFGL++ G
Sbjct: 139 LSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 192
Query: 244 RTHVSTQVMGTR--GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+V + MG + A E L T DV+S+GV+L E++S
Sbjct: 193 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 5 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 53
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 54 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKS 111
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 112 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 32/225 (14%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNY 138
+ + +IGEG FG V K I + G+ M A+K++K + H+++ E+
Sbjct: 16 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 139 LGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR--------------GARP 183
L +L HHPN++ L+G C L EY P G+L + L + A
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 184 LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
L + A ARG+ +L +++Q I+RD A NIL+ + AK++DFGL++ G
Sbjct: 129 LSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 182
Query: 244 RTHVSTQVMGTR--GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+V + MG + A E L T DV+S+GV+L E++S
Sbjct: 183 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLF 109
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 110 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 114/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+KK++ EG + E
Sbjct: 5 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 54 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 111
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V T
Sbjct: 112 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 114/221 (51%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 50
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ L+ + +P L
Sbjct: 51 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKS 108
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 109 YLFQLLQGLAFCHS--HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK LK PE FQ + +EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKILKVVDPTPEQFQAFR---NEVAVLR 87
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+ H N++ +G+ + +N +V ++ SL HL + + + L I +A A+G+
Sbjct: 88 KTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGM 145
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+LH + +I+RD K++NI L K+ DFGLA + Q G+ + AP
Sbjct: 146 DYLHA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 261 EYLATGR---LTAKCDVYSFGVVLLELLSG 287
E + + + DVYS+G+VL EL++G
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNY 138
R+ + S +G+G FG V D G ++AVK+L+ G +++ E+
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 139 LGQLHHPNLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGA 196
L LH +VK G G L LV EY+P G L + L R AR L + + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 124
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR- 255
+G+ +L ++ ++RD A NIL++SE + K++DFGLAK P D+ + + G
Sbjct: 125 CKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 181
Query: 256 -GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L+ + + DV+SFGVVL EL +
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF---QGHKEWLSE 135
++ R +G+G FG V +G D A G + +AVK LKP+ + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
VN + L H NL++L G L ++ V E P GSL + L + L TL + A+
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQ 123
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 254
A G+ +L ++ I+RD A N+LL + K+ DFGL +A P D +V +
Sbjct: 124 VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 181
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L T + D + FGV L E+ +
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 40 LGGGQYGEVYVGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C +V EYMP G+L ++L + + + +A + + +L
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE-- 147
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ K DV++FGV+L E+
Sbjct: 207 TFSIKSDVWAFGVLLWEI 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF---QGHKEWLSE 135
++ R +G+G FG V +G D A G + +AVK LKP+ + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
VN + L H NL++L G L ++ V E P GSL + L + L TL + A+
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQ 119
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 254
A G+ +L ++ I+RD A N+LL + K+ DFGL +A P D +V +
Sbjct: 120 VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L T + D + FGV L E+ +
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 15/178 (8%)
Query: 116 IAVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLE 173
+A+K LK G+ + +++LSE + +GQ HPN+++L G G ++V EYM GSL+
Sbjct: 80 VAIKALKA-GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 174 NHLFRRGARPLPWTLRIKVAIGAARGL--SFLHEAEQQVIYRDFKASNILLDSEFNAKLS 231
L R I +G RG+ + ++ ++RD A N+L+DS K+S
Sbjct: 139 TFL-----RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 232 DFGLAKAGPTGDRTHVSTQVMGTR---GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
DFGL++ D + G + + APE +A ++ DV+SFGVV+ E+L+
Sbjct: 194 DFGLSRV--LEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF---QGHKEWLSE 135
++ R +G+G FG V +G D A G + +AVK LKP+ + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
VN + L H NL++L G L ++ V E P GSL + L + L TL + A+
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQ 129
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 254
A G+ +L ++ I+RD A N+LL + K+ DFGL +A P D +V +
Sbjct: 130 VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 187
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L T + D + FGV L E+ +
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF---QGHKEWLSE 135
++ R +G+G FG V +G D A G + +AVK LKP+ + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
VN + L H NL++L G L ++ V E P GSL + L + L TL + A+
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQ 119
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 254
A G+ +L ++ I+RD A N+LL + K+ DFGL +A P D +V +
Sbjct: 120 VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L T + D + FGV L E+ +
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+GEG FG V+ E + +++AVK LK K++ E L L H +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDK----ILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG-----------ARPLPWTLRIKVAIG 195
+VK G C++G+ ++V+EYM G L L G L + + +A
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+ +L A Q ++RD N L+ K+ DFG+++ + D V M
Sbjct: 137 IAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ PE + + T + DV+S GVVL E+ +
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 24/221 (10%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEW 132
+ NF+ IGEG +G VYK A G V+A+KK++ EG
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALKKIRLDTETEGVPSTA-- 52
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 53 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKS 110
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ V
Sbjct: 111 YLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 252 MGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
T Y APE L + + D++S G + E+++ RRA+
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNY 138
R+ + S +G+G FG V D G ++AVK+L+ G +++ E+
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYD-----PLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 139 LGQLHHPNLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGA 196
L LH +VK G G L LV EY+P G L + L R AR L + + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 136
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR- 255
+G+ +L ++ ++RD A NIL++SE + K++DFGLAK P D+ + + G
Sbjct: 137 CKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 193
Query: 256 -GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L+ + + DV+SFGVVL EL +
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 19/231 (8%)
Query: 63 CPNLKAFTFSELKNA----TRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAV 118
CP K T K+A + R + +G+G FG V+ G + T +A+
Sbjct: 247 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAI 296
Query: 119 KKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR 178
K LKP G + +L E + +L H LV+L + E +V EYM KGSL + L
Sbjct: 297 KTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 354
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ L + +A A G++++ ++RD +A+NIL+ K++DFGLA+
Sbjct: 355 ETGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARL 412
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRR 289
+ T + + APE GR T K DV+SFG++L EL + R
Sbjct: 413 IEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 186 KFSIKSDVWAFGVLLWEI 203
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 32/244 (13%)
Query: 53 MPRTECDILSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGV 112
MP T D PN F++ A+ + +IG G FG V G + L R
Sbjct: 1 MPHTYED----PNQAVHEFAKEIEAS-CITIERVIGAGEFGEVCSGRL---KLPGKRE-- 50
Query: 113 GMVIAVKKLKPEGF--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKG 170
+ +A+K LK G+ + +++L E + +GQ HPN++ L G + ++V EYM G
Sbjct: 51 -LPVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENG 108
Query: 171 SLENHLFRRGARPLPWTLRIKVAIGAARGLS--FLHEAEQQVIYRDFKASNILLDSEFNA 228
SL+ L + + + +G RG+S + ++ ++RD A NIL++S
Sbjct: 109 SLDTFLKKNDGQ-----FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVC 163
Query: 229 KLSDFGLAKAGPTGDRTHVSTQVMGTRG------YAAPEYLATGRLTAKCDVYSFGVVLL 282
K+SDFGL++ + TRG + APE +A + T+ DV+S+G+V+
Sbjct: 164 KVSDFGLSRVLEDDPEAAYT-----TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMW 218
Query: 283 ELLS 286
E++S
Sbjct: 219 EVVS 222
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+ K++ EG + E
Sbjct: 4 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALXKIRLDTETEGVPSTA--IRE 52
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 53 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 110
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 111 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 24/218 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSE 135
NF+ IGEG +G VYK A G V+A+ K++ EG + E
Sbjct: 3 NFQKVEKIGEGTYGVVYK---------ARNKLTGEVVALXKIRLDTETEGVPSTA--IRE 51
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
++ L +L+HPN+VKL+ + EN+L LV+E++ + L+ + +P L
Sbjct: 52 ISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF 109
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+GL+F H +V++RD K N+L+++E KL+DFGLA+A RT+ T + T
Sbjct: 110 QLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 255 RGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
Y APE L + + D++S G + E+++ RRA+
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 133
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 188
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 189 KFSIKSDVWAFGVLLWEI 206
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF---QGHKEWLSE 135
++ R +G+G FG V +G D A G + +AVK LKP+ + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
VN + L H NL++L G L ++ V E P GSL + L + L TL + A+
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQ 119
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 254
A G+ +L ++ I+RD A N+LL + K+ DFGL +A P D V +
Sbjct: 120 VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP 177
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L T + D + FGV L E+ +
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNY 138
R+ + S +G+G FG V + + G ++AVK+L+ G +++ E+
Sbjct: 7 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 139 LGQLHHPNLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGA 196
L LH +VK G G L LV EY+P G L + L R AR L + + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 120
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG-DRTHVSTQVMGTR 255
+G+ +L ++ ++RD A NIL++SE + K++DFGLAK P D V
Sbjct: 121 CKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI 178
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L+ + + DV+SFGVVL EL +
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+G G FG V G W ++ +AVK +K EG E+ E + +L HP
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----------VAVKMIK-EGSMSEDEFFQEAQTMMKLSHP 63
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LVK G C +V EY+ G L N+L G P L +++ G++FL
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-LEMCYDVCEGMAFL-- 120
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR---GYAAPEY 262
Q I+RD A N L+D + K+SDFG+ + D +VS+ +GT+ ++APE
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEV 176
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
+ ++K DV++FG+++ E+ S
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF---QGHKEWLSE 135
++ R +G+G FG V +G D A G + +AVK LKP+ + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWD------APSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
VN + L H NL++L G L ++ V E P GSL + L + L TL + A+
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQ 129
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT- 254
A G+ +L ++ I+RD A N+LL + K+ DFGL +A P D V +
Sbjct: 130 VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP 187
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L T + D + FGV L E+ +
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 192
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 63 CPNLKAFTFSELKNA----TRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAV 118
CP K T K+A + R + +G+G FG V+ G + T +A+
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAI 213
Query: 119 KKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR 178
K LKP G + +L E + +L H LV+L + E +V EYM KGSL + L
Sbjct: 214 KTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG 271
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ L + +A A G++++ ++RD +A+NIL+ K++DFGLA+
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARL 329
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
+ T + + APE GR T K DV+SFG++L EL + R
Sbjct: 330 IEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 63 CPNLKAFTFSELKNA----TRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAV 118
CP K T K+A + R + +G+G FG V+ G + T +A+
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAI 213
Query: 119 KKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR 178
K LKP G + +L E + +L H LV+L + E +V EYM KGSL + L
Sbjct: 214 KTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG 271
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ L + +A A G++++ ++RD +A+NIL+ K++DFGLA+
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARL 329
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
+ T + + APE GR T K DV+SFG++L EL + R
Sbjct: 330 IEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+GEG FG V+ + H L + M++AVK LK +++ E L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQDK--MLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG-----------ARPLPWTLRIKVAIG 195
+V+ G C +G L+V+EYM G L L G P P L +A+
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+ ++ A ++RD N L+ K+ DFG+++ + D V + M
Sbjct: 142 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ PE + + T + DV+SFGVVL E+ +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G + +T +A+K LKP G + +L E + +L H
Sbjct: 17 LGNGQFGEVWMGTWNGNT----------KVAIKTLKP-GTMSPESFLEEAQIMKKLKHDK 65
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L + E +V EYM KGSL + L R L + +A A G++++
Sbjct: 66 LVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER- 123
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
I+RD +++NIL+ + K++DFGLA+ + T + + APE G
Sbjct: 124 -MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYG 181
Query: 267 RLTAKCDVYSFGVVLLELLSGRRA 290
R T K DV+SFG++L EL++ R
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRV 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTFTAHAGAKFPIKWTAPESLAYN 185
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 186 KFSIKSDVWAFGVLLWEI 203
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+GEG FG V+ + H L + M++AVK LK +++ E L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQDK--MLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG-----------ARPLPWTLRIKVAIG 195
+V+ G C +G L+V+EYM G L L G P P L +A+
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+ ++ A ++RD N L+ K+ DFG+++ + D V + M
Sbjct: 136 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ PE + + T + DV+SFGVVL E+ +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 25 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 132
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 192 KFSIKSDVWAFGVLLWEI 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+GEG FG V+ + H L + M++AVK LK +++ E L L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQDK--MLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG-----------ARPLPWTLRIKVAIG 195
+V+ G C +G L+V+EYM G L L G P P L +A+
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+ ++ A ++RD N L+ K+ DFG+++ + D V + M
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ PE + + T + DV+SFGVVL E+ +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 57
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 58 KKLRHEKLVQLYAV-VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 116
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 117 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTA 173
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 174 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 204
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 32/225 (14%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNY 138
+ + +IGEG FG V K I + G+ M A+K++K + H+++ E+
Sbjct: 23 DIKFQDVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 139 LGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR--------------GARP 183
L +L HHPN++ L+G C L EY P G+L + L + A
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 184 LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
L + A ARG+ +L +++Q I+R+ A NIL+ + AK++DFGL++ G
Sbjct: 136 LSSQQLLHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQ 189
Query: 244 RTHVSTQVMGTR--GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+V + MG + A E L T DV+S+GV+L E++S
Sbjct: 190 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 228 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 335
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+R+ A N L+ K++DFGL++ TGD + APE LA
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 394
Query: 267 RLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG-DRRKLFRIMDIKLE 325
+ + K DV++FGV+L E+ + + PY G D +++ +++
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDYR 437
Query: 326 GQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
+ P+ V L C RPS +E+ A E +
Sbjct: 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 63 CPNLKAFTFSELKNA----TRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAV 118
CP K T K+A + R + +G+G FG V+ G + T +A+
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAI 213
Query: 119 KKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR 178
K LKP G + +L E + +L H LV+L + E +V EYM KGSL + L
Sbjct: 214 KTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKG 271
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ L + +A A G++++ ++RD +A+NIL+ K++DFGLA+
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARL 329
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
+ T + + APE GR T K DV+SFG++L EL + R
Sbjct: 330 IEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVG-----MVIAVKKLKPEGFQGHKEWL- 133
N + +G G FG V +EA G+G + +AVK LK KE L
Sbjct: 39 NLQFGKTLGAGAFGKV---------VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 89
Query: 134 SEVNYLGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG--------ARPL 184
SE+ + L H N+V L+G C G L++ EY G L N L R+ RPL
Sbjct: 90 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 185 PWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDR 244
+ + A+G++FL A + I+RD A N+LL + AK+ DFGLA+
Sbjct: 150 ELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 245 THVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
V + APE + T + DV+S+G++L E+ S
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 190 KFSIKSDVWAFGVLLWEI 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 190 KFSIKSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 34 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 141
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 200
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 201 KFSIKSDVWAFGVLLWEI 218
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYN 188
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 189 KFSIKSDVWAFGVLLWEI 206
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVG-----MVIAVKKLKPEGFQGHKEWL- 133
N + +G G FG V +EA G+G + +AVK LK KE L
Sbjct: 47 NLQFGKTLGAGAFGKV---------VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 134 SEVNYLGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG--------ARPL 184
SE+ + L H N+V L+G C G L++ EY G L N L R+ RPL
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 185 PWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDR 244
+ + A+G++FL A + I+RD A N+LL + AK+ DFGLA+
Sbjct: 158 ELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 245 THVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
V + APE + T + DV+S+G++L E+ S
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 19/224 (8%)
Query: 65 NLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKL-K 122
L+ +ELK ++G G FG VYKG W+ E V + +A+K L +
Sbjct: 31 QLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGE------TVKIPVAIKILNE 77
Query: 123 PEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGAR 182
G + + E++ E + + HP+LV+L+G CL +L V + MP G L ++
Sbjct: 78 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDN 136
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
+ L + + A+G+ +L E +++++RD A N+L+ S + K++DFGLA+
Sbjct: 137 -IGSQLLLNWCVQIAKGMMYLEE--RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
Query: 243 DRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
++ + + + A E + + T + DV+S+GV + EL++
Sbjct: 194 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+RD A N L+ K++DFGL++ TGD + APE LA
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYN 189
Query: 267 RLTAKCDVYSFGVVLLEL 284
+ + K DV++FGV+L E+
Sbjct: 190 KFSIKSDVWAFGVLLWEI 207
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V+ G+ + T +AVK LKP G + +L E N + L H
Sbjct: 20 LGAGQFGEVWMGYYNNST----------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 68
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLF--RRGARPLPWTLRIKVAIGAARGLSFLH 204
LV+L E ++ E+M KGSL + L G LP + I A G++++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 126
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
+ I+RD +A+N+L+ K++DFGLA+ + T + + APE +
Sbjct: 127 R--KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-WTAPEAIN 183
Query: 265 TGRLTAKCDVYSFGVVLLELLS 286
G T K +V+SFG++L E+++
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVT 205
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 60
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 61 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR---G 256
++++ ++RD +A+NIL+ K++DFGLA+ D + + Q G +
Sbjct: 120 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIK 173
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
+ APE GR T K DV+SFG++L EL + R
Sbjct: 174 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 207
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 127 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK-WTA 183
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 267 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 374
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+R+ A N L+ K++DFGL++ TGD + APE LA
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 433
Query: 267 RLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG-DRRKLFRIMDIKLE 325
+ + K DV++FGV+L E+ + + PY G D +++ +++
Sbjct: 434 KFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDYR 476
Query: 326 GQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
+ P+ V L C RPS +E+ A E +
Sbjct: 477 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 58
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 59 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR---G 256
++++ ++RD +A+NIL+ K++DFGLA+ D + + Q G +
Sbjct: 118 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIK 171
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
+ APE GR T K DV+SFG++L EL + R
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 205
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 86 LIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKL-KPEGFQGHKEWLSEVNYLGQLH 143
++G G FG VYKG W+ E V + +A+K L + G + + E++ E + +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGE------TVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
HP+LV+L+G CL +L V + MP G L ++ + L + + A+G+ +L
Sbjct: 76 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMMYL 133
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYL 263
E +++++RD A N+L+ S + K++DFGLA+ ++ + + + A E +
Sbjct: 134 EE--RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 264 ATGRLTAKCDVYSFGVVLLELLS 286
+ T + DV+S+GV + EL++
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 56
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 57 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 115
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 116 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTA 172
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 173 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 203
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 13/203 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G GG VY + E T+ + + + + K E K + EV+ QL H N
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETL---KRFEREVHNSSQLSHQN 72
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
+V +I + + LV EY+ +L ++ G PL I G+ H+
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHD- 129
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++++RD K NIL+DS K+ DFG+AKA T + V+GT Y +PE A G
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQ-AKG 186
Query: 267 RLTAKC-DVYSFGVVLLELLSGR 288
T +C D+YS G+VL E+L G
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGE 209
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 127 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTA 183
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 72 SELKNATRNFRPD-------SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE 124
EL+N + D ++GEG FG V +G + + G + +AVK +K +
Sbjct: 20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQED------GTSLKVAVKTMKLD 73
Query: 125 GFQGHK--EWLSEVNYLGQLHHPNLVKLIGFCLDGENR-----LLVYEYMPKGSLENHL- 176
+ E+LSE + HPN+++L+G C++ ++ +++ +M G L +L
Sbjct: 74 NSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL 133
Query: 177 ---FRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDF 233
G + +P +K + A G+ +L + + ++RD A N +L + ++DF
Sbjct: 134 YSRLETGPKHIPLQTLLKFMVDIALGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVADF 191
Query: 234 GLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLEL 284
GL+K +GD + A E LA T+K DV++FGV + E+
Sbjct: 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 127 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTA 183
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 68 KKLRHEKLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 127 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTA 183
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G VY+G +++L +AVK LK + + +E+L E + ++ HPN
Sbjct: 225 LGGGQYGEVYEGVWKKYSL---------TVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 274
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV+L+G C ++ E+M G+L ++L + + + + +A + + +L
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 332
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++ I+R+ A N L+ K++DFGL++ TGD + APE LA
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 391
Query: 267 RLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG-DRRKLFRIMDIKLE 325
+ + K DV++FGV+L E+ + + PY G D +++ +++
Sbjct: 392 KFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDYR 434
Query: 326 GQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQL 363
+ P+ V L C RPS +E+ A E +
Sbjct: 435 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 118/221 (53%), Gaps = 27/221 (12%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK----KLKPEGFQG 128
ELK+ +F S +G G G V K +H RP G+++A K ++KP
Sbjct: 12 ELKD--DDFERISELGAGNGGVVTKV---QH-----RPS-GLIMARKLIHLEIKP---AI 57
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWT 187
+ + E+ L + + P +V G F DGE + + E+M GSL+ L + A+ +P
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL--KEAKRIPEE 114
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV 247
+ KV+I RGL++L E + Q+++RD K SNIL++S KL DFG++ G D +
Sbjct: 115 ILGKVSIAVLRGLAYLRE-KHQIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 169
Query: 248 STQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
+ +GTR Y APE L + + D++S G+ L+EL GR
Sbjct: 170 ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 33/213 (15%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 20 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 63
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--IKVAIGAAR 198
+ H N++ +G+ + +V ++ SL +HL A + ++ I +A AR
Sbjct: 64 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTAR 119
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
G+ +LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ +
Sbjct: 120 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 259 APEYL---ATGRLTAKCDVYSFGVVLLELLSGR 288
APE + + + + DVY+FG+VL EL++G+
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 19/232 (8%)
Query: 63 CPNLKAFTFSELKNA----TRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAV 118
CP K T K+A + R + +G+G FG V+ G + T +A+
Sbjct: 165 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAI 214
Query: 119 KKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR 178
K LKP G + +L E + +L H LV+L + E +V EYM KGSL + L
Sbjct: 215 KTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG 272
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ L + +A A G++++ ++RD +A+NIL+ K++DFGL +
Sbjct: 273 EMGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLGRL 330
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
+ T + + APE GR T K DV+SFG++L EL + R
Sbjct: 331 IEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 381
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 68 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR---G 256
++++ ++RD A+NIL+ K++DFGLA+ D + + Q G +
Sbjct: 127 MAYVER--MNYVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQ--GAKFPIK 180
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
+ APE GR T K DV+SFG++L EL + R
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
++ H LV+L + E +V EYM KGSL + L + L + +A A G
Sbjct: 68 KKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 127 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTA 183
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 22/214 (10%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
R ++G G FG VYKG WI + V + +A+K L+ + +KE L E
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGE------NVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP-----LPWTLRIKV 192
+ + P + +L+G CL +L V + MP G L +H+ R L W ++I
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI-- 128
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
A+G+S+L + ++++RD A N+L+ S + K++DFGLA+ + + +
Sbjct: 129 ----AKGMSYLEDV--RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGK 182
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ A E + R T + DV+S+GV + EL++
Sbjct: 183 VPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 33/213 (15%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 75
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--IKVAIGAAR 198
+ H N++ +G+ +V ++ SL +HL A + ++ I +A AR
Sbjct: 76 KTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTAR 131
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
G+ +LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ +
Sbjct: 132 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 259 APEYL---ATGRLTAKCDVYSFGVVLLELLSGR 288
APE + + + + DVY+FG+VL EL++G+
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 33/213 (15%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 75
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--IKVAIGAAR 198
+ H N++ +G+ + +V ++ SL +HL A + ++ I +A AR
Sbjct: 76 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTAR 131
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
G+ +LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ +
Sbjct: 132 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 259 APEYL---ATGRLTAKCDVYSFGVVLLELLSGR 288
APE + + + + DVY+FG+VL EL++G+
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 64
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + ++ A G
Sbjct: 65 KKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 124 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTA 180
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 64
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KGSL + L + L + ++ A G
Sbjct: 65 KKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 124 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK-WTA 180
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KG L + L + L + +A A G
Sbjct: 68 KKLRHEKLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 127 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTA 183
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 87 IGEGGFGYVYKGWID-EHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG V+ G + ++TL A + + ++ P + ++L E L Q HP
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVK-------SCRETLPPDLKA--KFLQEARILKQYSHP 172
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI----GAARGLS 201
N+V+LIG C + +V E + G L GAR LR+K + AA G+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-----LRVKTLLQMVGDAAAGME 227
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR----GY 257
+L + I+RD A N L+ + K+SDFG+++ G V G R +
Sbjct: 228 YLE--SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG----VXAASGGLRQVPVKW 281
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
APE L GR +++ DV+SFG++L E S
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+ R + +G+G FG V+ G + T +A+K LKP G + +L E +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKP-GTMSPEAFLQEAQVM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+L H LV+L + E +V EYM KG L + L + L + +A A G
Sbjct: 68 KKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
++++ ++RD +A+NIL+ K++DFGLA+ + T + + A
Sbjct: 127 MAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTA 183
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGRRA 290
PE GR T K DV+SFG++L EL + R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHKEWLSEVNYLGQLHHP 145
IG+G FG VYKG ID HT E V+A+K + E ++ E+ L Q P
Sbjct: 27 IGKGSFGEVYKG-IDNHTKE--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+ + G L ++ EY+ GS + L + G PL T + +GL +LH
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPG--PLEETYIATILREILKGLDYLHS 134
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
++ I+RD KA+N+LL + + KL+DFG+ AG D +GT + APE +
Sbjct: 135 --ERKIHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 266 GRLTAKCDVYSFGVVLLELLSG 287
K D++S G+ +EL G
Sbjct: 191 SAYDFKADIWSLGITAIELAKG 212
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQL 142
+ ++GEG FG VY+G H G + +AVK K + +KE ++SE + L
Sbjct: 29 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
HP++VKLIG ++ E ++ E P G L H R L + ++ + +++
Sbjct: 83 DHPHIVKLIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAY 140
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
L ++RD NIL+ S KL DFGL++ D S + + + +PE
Sbjct: 141 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPES 197
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
+ R T DV+ F V + E+LS
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILS 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQL 142
+ ++GEG FG VY+G H G + +AVK K + +KE ++SE + L
Sbjct: 13 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
HP++VKLIG ++ E ++ E P G L H R L + ++ + +++
Sbjct: 67 DHPHIVKLIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAY 124
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
L ++RD NIL+ S KL DFGL++ D S + + + +PE
Sbjct: 125 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPES 181
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
+ R T DV+ F V + E+LS
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILS 205
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 87 IGEGGFGYVYKGWID-EHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG V+ G + ++TL A + + ++ P + ++L E L Q HP
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVK-------SCRETLPPDLKA--KFLQEARILKQYSHP 172
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI----GAARGLS 201
N+V+LIG C + +V E + G L GAR LR+K + AA G+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-----LRVKTLLQMVGDAAAGME 227
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
+L + I+RD A N L+ + K+SDFG+++ G + APE
Sbjct: 228 YLE--SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE 285
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
L GR +++ DV+SFG++L E S
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 41/229 (17%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGV-----GMVIAVKKLKPEGFQGHK-EWLSEVNYLG 140
IGEG FG V+ +A PG+ ++AVK LK E + ++ E +
Sbjct: 55 IGEGAFGRVF---------QARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 105
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR--------------------- 179
+ +PN+VKL+G C G+ L++EYM G L N R
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 180 --GARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK 237
G PL ++ +A A G+++L +E++ ++RD N L+ K++DFGL++
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 238 AGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ D + PE + R T + DV+++GVVL E+ S
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQL 142
+ ++GEG FG VY+G H G + +AVK K + +KE ++SE + L
Sbjct: 17 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
HP++VKLIG ++ E ++ E P G L H R L + ++ + +++
Sbjct: 71 DHPHIVKLIGI-IEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
L ++RD NIL+ S KL DFGL++ D S + + + +PE
Sbjct: 129 LESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPES 185
Query: 263 LATGRLTAKCDVYSFGVVLLELLS 286
+ R T DV+ F V + E+LS
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILS 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 18 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 61
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+ H N++ +G+ + +V ++ SL +HL + I +A A+G+
Sbjct: 62 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 119
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 120 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 177
Query: 261 EYLATGR---LTAKCDVYSFGVVLLELLSGR 288
E + + + DVY+FG+VL EL++G+
Sbjct: 178 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 27/225 (12%)
Query: 69 FTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK----KLKPE 124
ELK+ +F S +G G G V+K + G+V+A K ++KP
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKP- 48
Query: 125 GFQGHKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
+ + E+ L + + P +V G F DGE + + E+M GSL+ L + G
Sbjct: 49 --AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGR-- 103
Query: 184 LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
+P + KV+I +GL++L E + ++++RD K SNIL++S KL DFG++ G D
Sbjct: 104 IPEQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID 160
Query: 244 RTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
++ + +GTR Y +PE L + + D++S G+ L+E+ GR
Sbjct: 161 E--MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 59
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+ H N++ +G+ +V ++ SL +HL + I +A A+G+
Sbjct: 60 KTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 117
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 118 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 261 EYLATGR---LTAKCDVYSFGVVLLELLSGR 288
E + + + DVY+FG+VL EL++G+
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKY 143
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 27/221 (12%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK----KLKPEGFQG 128
ELK+ +F S +G G G V+K + G+V+A K ++KP
Sbjct: 64 ELKD--DDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKP---AI 109
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWT 187
+ + E+ L + + P +V G F DGE + + E+M GSL+ L + G +P
Sbjct: 110 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGR--IPEQ 166
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV 247
+ KV+I +GL++L E + ++++RD K SNIL++S KL DFG++ G D +
Sbjct: 167 ILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 221
Query: 248 STQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
+ +GTR Y +PE L + + D++S G+ L+E+ GR
Sbjct: 222 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 43 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 86
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+ H N++ +G+ + +V ++ SL +HL + I +A A+G+
Sbjct: 87 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 144
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 145 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
Query: 261 EYLATGR---LTAKCDVYSFGVVLLELLSGR 288
E + + + DVY+FG+VL EL++G+
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 34 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 145 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 64
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+ H N++ +G+ + +V ++ SL +HL + I +A A+G+
Sbjct: 65 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 122
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 123 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
Query: 261 EYLATGR---LTAKCDVYSFGVVLLELLSGR 288
E + + + DVY+FG+VL EL++G+
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 35 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 145
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 146 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 26 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 136
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 137 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 27 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 138 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 27 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 137
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 138 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 87
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+ H N++ +G+ + +V ++ SL +HL + I +A A+G+
Sbjct: 88 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 145
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 146 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
Query: 261 EYLATGR---LTAKCDVYSFGVVLLELLSGR 288
E + + + DVY+FG+VL EL++G+
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 95/204 (46%), Gaps = 25/204 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEW---LSEVNYLGQLH 143
IG G FG VY D E V+A+KK+ G Q +++W + EV +L +L
Sbjct: 62 IGHGSFGAVYFA-RDVRNSE--------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
HPN ++ G L LV EY GS + L +PL V GA +GL++L
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYL 263
H +I+RD KA NILL KL DFG A + +GT + APE +
Sbjct: 171 HS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVI 222
Query: 264 AT---GRLTAKCDVYSFGVVLLEL 284
G+ K DV+S G+ +EL
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 86
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D + Q G + APE
Sbjct: 144 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPE 200
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 86
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D + Q G + APE
Sbjct: 144 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPE 200
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG VYKG W H A + ++ V P+ Q K +EV L + H
Sbjct: 21 IGSGSFGTVYKGKW---HGDVAVK-----MLNVTAPTPQQLQAFK---NEVGVLRKTRHV 69
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N++ +G+ + +V ++ SL +HL + I +A A+G+ +LH
Sbjct: 70 NILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA 127
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +I+RD K++NI L + K+ DFGLA +H Q+ G+ + APE +
Sbjct: 128 --KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 266 GR---LTAKCDVYSFGVVLLELLSGR 288
+ + DVY+FG+VL EL++G+
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSEVNYLGQL 142
+GEG +G VYK A+ G ++A+K+++ EG + E++ L +L
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
HHPN+V LI LV+E+M K L+ L ++I + RG++
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLY-QLLRGVAH 134
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
H+ ++++RD K N+L++S+ KL+DFGLA+A R++ T + T Y AP+
Sbjct: 135 CHQ--HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDV 190
Query: 263 L-ATGRLTAKCDVYSFGVVLLELLSGR 288
L + + + D++S G + E+++G+
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEW---LSEVNYLGQLH 143
IG G FG VY A V+A+KK+ G Q +++W + EV +L +L
Sbjct: 23 IGHGSFGAVYF---------ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
HPN ++ G L LV EY GS + L +PL V GA +GL++L
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYL 263
H +I+RD KA NILL KL DFG A + +GT + APE +
Sbjct: 132 HS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVI 183
Query: 264 AT---GRLTAKCDVYSFGVVLLEL 284
G+ K DV+S G+ +EL
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSEVNYLGQL 142
+GEG +G VYK A+ G ++A+K+++ EG + E++ L +L
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
HHPN+V LI LV+E+M K L+ L ++I + RG++
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLY-QLLRGVAH 134
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
H+ ++++RD K N+L++S+ KL+DFGLA+A R++ T + T Y AP+
Sbjct: 135 CHQ--HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDV 190
Query: 263 L-ATGRLTAKCDVYSFGVVLLELLSGR 288
L + + + D++S G + E+++G+
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 59
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+ H N++ +G+ + +V ++ SL +HL + I +A A+G+
Sbjct: 60 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 117
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 118 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 261 EYLATGR---LTAKCDVYSFGVVLLELLSGR 288
E + + + DVY+FG+VL EL++G+
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 36 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 79
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+ H N++ +G+ + +V ++ SL +HL + I +A A+G+
Sbjct: 80 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 137
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 138 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
Query: 261 EYLATGR---LTAKCDVYSFGVVLLELLSGR 288
E + + + DVY+FG+VL EL++G+
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIK------VAIGAA 197
H N++ + R E M L HL L T +
Sbjct: 100 HENIIGINDII-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRG 256
RGL ++H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR
Sbjct: 155 RGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 257 YAAPEYLATGR-LTAKCDVYSFGVVLLELLSGR 288
Y APE + + T D++S G +L E+LS R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 374 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 428
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 429 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 485
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D + Q G + APE
Sbjct: 486 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPE 542
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 30 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 84
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 141
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D + Q G + APE
Sbjct: 142 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPE 198
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 142 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLK-----PEGFQGHKEWLSEVNYLG 140
IG G FG VYKG W + +AVK L P+ Q K +EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFK---NEVGVLR 87
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+ H N++ +G+ + +V ++ SL +HL + I +A A+G+
Sbjct: 88 KTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGM 145
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
+LH + +I+RD K++NI L + K+ DFGLA +H Q+ G+ + AP
Sbjct: 146 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
Query: 261 EYLATGR---LTAKCDVYSFGVVLLELLSGR 288
E + + + DVY+FG+VL EL++G+
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L +
Sbjct: 37 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 147
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 148 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 139
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 140 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 375 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 429
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 486
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D + Q G + APE
Sbjct: 487 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPE 543
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 160 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
IG G FG VYKG W H A + ++ V P+ Q K +EV L + H
Sbjct: 16 IGSGSFGTVYKGKW---HGDVAVK-----MLNVTAPTPQQLQAFK---NEVGVLRKTRHV 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N++ +G+ + +V ++ SL +HL + I +A A+G+ +LH
Sbjct: 65 NILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +I+RD K++NI L + K+ DFGLA +H Q+ G+ + APE +
Sbjct: 123 --KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 266 GR---LTAKCDVYSFGVVLLELLSGR 288
+ + DVY+FG+VL EL++G+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 21/219 (9%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQG 128
++K+ + + +GEG F VYK A ++A+KK+K E G
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYK---------ARDKNTNQIVAIKKIKLGHRSEAKDG 54
Query: 129 -HKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWT 187
++ L E+ L +L HPN++ L+ N LV+++M + LE + P
Sbjct: 55 INRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSH 113
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV 247
++ + + +GL +LH+ +++RD K +N+LLD KL+DFGLAK+ + +R +
Sbjct: 114 IKAYMLM-TLQGLEYLHQ--HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYX 170
Query: 248 STQVMGTRGYAAPEYLATGRLT-AKCDVYSFGVVLLELL 285
V TR Y APE L R+ D+++ G +L ELL
Sbjct: 171 HQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 70
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D + Q G + APE
Sbjct: 128 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPE 184
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 19/217 (8%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEW 132
ELK+ +F S +G G G V+K L AR + + ++KP +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKP---AIRNQI 51
Query: 133 LSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
+ E+ L + + P +V G F DGE + + E+M GSL+ L + G +P + K
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGR--IPEQILGK 108
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
V+I +GL++L E + ++++RD K SNIL++S KL DFG++ G D ++
Sbjct: 109 VSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 163
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
+GTR Y +PE L + + D++S G+ L+E+ GR
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 143/317 (45%), Gaps = 48/317 (15%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG-FQGHKEWLSEVNYLGQLHHP 145
+G+G FG VY+G + + + +AVK + + E+L+E + +
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IKVAIG 195
++V+L+G G+ L+V E M G L+++L R RP P TL+ I++A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+++L+ ++ ++RD A N ++ +F K+ DFG+ + D + +
Sbjct: 138 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRK 315
+ APE L G T D++SFGVVL E+ S AEQ PY G +
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNE 238
Query: 316 LFRIMDIKLEGQY---PQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQLPPPRDPAS 371
+++ ++G Y P V L C K+RP+ E+++ L +D
Sbjct: 239 --QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL------KDDLH 290
Query: 372 PSNSDPQVIYSPHVKSP 388
PS + +S K+P
Sbjct: 291 PSFPEVSFFHSEENKAP 307
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 22 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 76
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 133
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D + Q G + APE
Sbjct: 134 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPE 190
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 12 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 66
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 123
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D + Q G + APE
Sbjct: 124 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPE 180
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A++K+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIRKISPFEHQTYCQRTLREIKILLRFR 83
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 10 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 64
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 121
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D + Q G + APE
Sbjct: 122 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPE 178
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 27/221 (12%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK----KLKPEGFQG 128
ELK+ +F S +G G G V+K + G+V+A K ++KP
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKP---AI 47
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWT 187
+ + E+ L + + P +V G F DGE + + E+M GSL+ L + G +P
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGR--IPEQ 104
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV 247
+ KV+I +GL++L E + ++++RD K SNIL++S KL DFG++ G D +
Sbjct: 105 ILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 159
Query: 248 STQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
+ +GTR Y +PE L + + D++S G+ L+E+ GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 27/236 (11%)
Query: 61 LSCPNLKAFTFSELKNATRNFRPDSL------IGEGGFGYVYKGWIDEHTLEAARPGVGM 114
L NL + + ++ TR+ P+ +G+G FG VYK A +
Sbjct: 13 LGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYK---------AQNKETSV 63
Query: 115 VIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLEN 174
+ A K + + + ++++ E++ L HPN+VKL+ N ++ E+ G+++
Sbjct: 64 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 123
Query: 175 HLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFG 234
+ RPL + V L++LH+ ++I+RD KA NIL + + KL+DFG
Sbjct: 124 VMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFG 180
Query: 235 L-AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGR-----LTAKCDVYSFGVVLLEL 284
+ AK T R +GT + APE + K DV+S G+ L+E+
Sbjct: 181 VSAKNTRTIQR---RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 143 HHPNLVKLIGFCLDGENRLL-VYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
+HP LV L C E+RL V EY+ G L H+ R+ R LP + + L+
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALN 167
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT-GDRTHVSTQVMGTRGYAAP 260
+LHE + +IYRD K N+LLDSE + KL+D+G+ K G GD T + GT Y AP
Sbjct: 168 YLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAP 222
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQN 301
E L D ++ GV++ E+++GR D VG+ N
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI--VGSSDN 261
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 27/221 (12%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK----KLKPEGFQG 128
ELK+ +F S +G G G V+K + G+V+A K ++KP
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKP---AI 47
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWT 187
+ + E+ L + + P +V G F DGE + + E+M GSL+ L + G +P
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGR--IPEQ 104
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV 247
+ KV+I +GL++L E + ++++RD K SNIL++S KL DFG++ G D +
Sbjct: 105 ILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 159
Query: 248 STQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
+ +GTR Y +PE L + + D++S G+ L+E+ GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 27/221 (12%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK----KLKPEGFQG 128
ELK+ +F S +G G G V+K + G+V+A K ++KP
Sbjct: 29 ELKD--DDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKP---AI 74
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWT 187
+ + E+ L + + P +V G F DGE + + E+M GSL+ L + G +P
Sbjct: 75 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGR--IPEQ 131
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV 247
+ KV+I +GL++L E + ++++RD K SNIL++S KL DFG++ G D +
Sbjct: 132 ILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 186
Query: 248 STQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
+ +GTR Y +PE L + + D++S G+ L+E+ GR
Sbjct: 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG-FQGHKEWLSEVNYLGQLHHP 145
+G+G FG VY+G + + + +AVK + + E+L+E + +
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IKVAIG 195
++V+L+G G+ L+V E M G L+++L R RP P TL+ I++A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+++L+ ++ ++RD A N ++ +F K+ DFG+ + D + +
Sbjct: 136 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRK 315
+ APE L G T D++SFGVVL E+ S AEQ PY G +
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNE 236
Query: 316 LFRIMDIKLEGQY---PQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQLPPPRDP 369
+++ ++G Y P V L C K+RP+ E+++ L+ P P
Sbjct: 237 --QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 292
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG-FQGHKEWLSEVNYLGQLHHP 145
+G+G FG VY+G + + + +AVK + + E+L+E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IKVAIG 195
++V+L+G G+ L+V E M G L+++L R RP P TL+ I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+++L+ ++ ++RD A N ++ +F K+ DFG+ + D + +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRK 315
+ APE L G T D++SFGVVL E+ S AEQ PY G +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNE 239
Query: 316 LFRIMDIKLEGQY---PQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQLPPPRDP 369
+++ ++G Y P V L C K+RP+ E+++ L+ P P
Sbjct: 240 --QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 143 HHPNLVKLIGFCLDGENRLL-VYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
+HP LV L C E+RL V EY+ G L H+ R+ R LP + + L+
Sbjct: 64 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALN 120
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT-GDRTHVSTQVMGTRGYAAP 260
+LHE + +IYRD K N+LLDSE + KL+D+G+ K G GD T + GT Y AP
Sbjct: 121 YLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAP 175
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQN 301
E L D ++ GV++ E+++GR D VG+ N
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI--VGSSDN 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 143 HHPNLVKLIGFCLDGENRLL-VYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
+HP LV L C E+RL V EY+ G L H+ R+ R LP + + L+
Sbjct: 79 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALN 135
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT-GDRTHVSTQVMGTRGYAAP 260
+LHE + +IYRD K N+LLDSE + KL+D+G+ K G GD T + GT Y AP
Sbjct: 136 YLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAP 190
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQN 301
E L D ++ GV++ E+++GR D VG+ N
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI--VGSSDN 229
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 11/216 (5%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEW 132
++K +F ++G+G FG V+ + A + + + E K
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
LS HP L + EN V EY+ G L H+ + +
Sbjct: 72 LSLA-----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFY 124
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
A GL FLH + ++YRD K NILLD + + K++DFG+ K GD + +
Sbjct: 125 AAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFC 180
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GT Y APE L + D +SFGV+L E+L G+
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 142 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V G +H L + V ++ +K++ G + E+ L HP+
Sbjct: 24 LGVGTFGKVKVG---KHELTGHKVAVK-ILNRQKIRSLDVVG--KIRREIQNLKLFRHPH 77
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
++KL + +V EY+ G L +++ + G + R+ I + G+ + H
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--GVDYCHR- 134
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
V++RD K N+LLD+ NAK++DFGL+ G+ S G+ YAAPE + +G
Sbjct: 135 -HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEVI-SG 189
Query: 267 RLTA--KCDVYSFGVVLLELLSGRRAVDKTRV 296
RL A + D++S GV+L LL G D V
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 143 HHPNLVKLIGFCLDGENRLL-VYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
+HP LV L C E+RL V EY+ G L H+ R+ R LP + + L+
Sbjct: 68 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALN 124
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT-GDRTHVSTQVMGTRGYAAP 260
+LHE + +IYRD K N+LLDSE + KL+D+G+ K G GD T + GT Y AP
Sbjct: 125 YLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAP 179
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQN 301
E L D ++ GV++ E+++GR D VG+ N
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI--VGSSDN 218
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N++ +GEG FG V + HT + + +I K L QG E E++YL
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 58
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L HP+++KL + ++V EY L +++ +R R I +A
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA-- 115
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAA
Sbjct: 116 VEYCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 170
Query: 260 PEYLATGRLTA--KCDVYSFGVVLLELLSGRRAVDKTRV 296
PE + +G+L A + DV+S GV+L +L R D +
Sbjct: 171 PEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI 208
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVG-----MVIAVKKLKPEGFQGHKEWL- 133
N + +G G FG V +EA G+G + +AVK LK KE L
Sbjct: 47 NLQFGKTLGAGAFGKV---------VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 134 SEVNYLGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
SE+ + L H N+V L+G C G L++ EY G L N L RR +R L +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-RRKSRVLETDPAFAI 156
Query: 193 AIG-------------AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAG 239
A A+G++FL A + I+RD A N+LL + AK+ DFGLA+
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 240 PTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
V + APE + T + DV+S+G++L E+ S
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVG-----MVIAVKKLKPEGFQGHKEWL- 133
N + +G G FG V +EA G+G + +AVK LK KE L
Sbjct: 47 NLQFGKTLGAGAFGKV---------VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 134 SEVNYLGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
SE+ + L H N+V L+G C G L++ EY G L N L RR +R L +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-RRKSRVLETDPAFAI 156
Query: 193 AIG-------------AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAG 239
A A+G++FL A + I+RD A N+LL + AK+ DFGLA+
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 240 PTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
V + APE + T + DV+S+G++L E+ S
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 27/221 (12%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK----KLKPEGFQG 128
ELK+ +F S +G G G V+K + G+V+A K ++KP
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKP---AI 47
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWT 187
+ + E+ L + + P +V G F DGE + + E+M GSL+ L + G +P
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGR--IPEQ 104
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV 247
+ KV+I +GL++L E + ++++RD K SNIL++S KL DFG++ G D +
Sbjct: 105 ILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 159
Query: 248 STQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
+ +GTR Y +PE L + + D++S G+ L+E+ GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 27/221 (12%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK----KLKPEGFQG 128
ELK+ +F S +G G G V+K + G+V+A K ++KP
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKP---AI 47
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWT 187
+ + E+ L + + P +V G F DGE + + E+M GSL+ L + G +P
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGR--IPEQ 104
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV 247
+ KV+I +GL++L E + ++++RD K SNIL++S KL DFG++ G D +
Sbjct: 105 ILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 159
Query: 248 STQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
+ +GTR Y +PE L + + D++S G+ L+E+ GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + + + + +A+KK+ P Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 141
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T T+ + TR Y APE
Sbjct: 142 IHSA--NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLHHP 145
IGEG +G V + +H + +A+KK+ P Q + + L E+ L + H
Sbjct: 51 IGEGAYGMVSSAY--DHVRKTR-------VAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSFLH 204
N++ + + Y+ + +E L++ ++ L RGL ++H
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPEYL 263
A V++RD K SN+L+++ + K+ DFGLA+ A P D T T+ + TR Y APE +
Sbjct: 162 SA--NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 264 ATGR-LTAKCDVYSFGVVLLELLSGR 288
+ T D++S G +L E+LS R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 102/235 (43%), Gaps = 39/235 (16%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVG-----MVIAVKKLKPEGFQGHKEWL- 133
N + +G G FG V +EA G+G + +AVK LK KE L
Sbjct: 32 NLQFGKTLGAGAFGKV---------VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 82
Query: 134 SEVNYLGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG------------ 180
SE+ + L H N+V L+G C G L++ EY G L N L R+
Sbjct: 83 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 181 ---------ARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLS 231
RPL + + A+G++FL A + I+RD A N+LL + AK+
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIG 200
Query: 232 DFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
DFGLA+ V + APE + T + DV+S+G++L E+ S
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N++ +GEG FG V + HT + + +I K L QG E E++YL
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 68
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L HP+++KL + ++V EY L +++ +R R I +A
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA-- 125
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAA
Sbjct: 126 VEYCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 180
Query: 260 PEYLATGRLTA--KCDVYSFGVVLLELLSGRRAVDKTRV 296
PE + +G+L A + DV+S GV+L +L R D +
Sbjct: 181 PEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI 218
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 73
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 131
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 132 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N++ +GEG FG V + HT + + +I K L QG E E++YL
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L HP+++KL + ++V EY L +++ +R R I +A
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA-- 124
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAA
Sbjct: 125 VEYCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 179
Query: 260 PEYLATGRLTA--KCDVYSFGVVLLELLSGRRAVDKTRV 296
PE + +G+L A + DV+S GV+L +L R D +
Sbjct: 180 PEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + L+ +P +AVK LK + + + +SE+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--------------I 190
N++ L+G C ++ EY KG+L +L R L ++ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A ARG+ +L A ++ I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXX 206
Query: 251 VMGTRG-----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T G + APE L T + DV+SFGV+L E+ +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 70
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 128
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 129 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG-FQGHKEWLSEVNYLGQLHHP 145
+G+G FG VY+G + + + +AVK + + E+L+E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IKVAIG 195
++V+L+G G+ L+V E M G L+++L R RP P TL+ I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+++L+ ++ ++RD A N ++ +F K+ DFG+ + D + +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L G T D++SFGVVL E+ S
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N++ +GEG FG V + HT + + +I K L QG E E++YL
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---HTTTGQKVALK-IINKKVLAKSDMQGRIE--REISYL 62
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L HP+++KL + ++V EY L +++ +R R I +A
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA-- 119
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAA
Sbjct: 120 VEYCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 174
Query: 260 PEYLATGRLTA--KCDVYSFGVVLLELLSGRRAVDKTRV 296
PE + +G+L A + DV+S GV+L +L R D +
Sbjct: 175 PEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI 212
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 79
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 137
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 138 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 130
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 131 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 129
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 130 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 70
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIA 128
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 129 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L V +I +L P Q + EV +
Sbjct: 16 NYRLQKTIGKGNFAKVK---LARHVLTGREVAVK-IIDKTQLNPTSLQ---KLFREVRIM 68
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + LV EY G + ++L G R R K
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFR-QIVSA 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H+ + +++RD KA N+LLD + N K++DFG + G++ G+ YAA
Sbjct: 127 VQYCHQ--KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAA 181
Query: 260 PEYLATGRLTA-KCDVYSFGVVLLELLSG 287
PE + + DV+S GV+L L+SG
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 127
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 128 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 33 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T + + TR Y APE
Sbjct: 144 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQLH 143
S IGEG +G V + L R +A+KK+ P Q + + L E+ L +
Sbjct: 34 SYIGEGAYGMVCSAY---DNLNKVR------VAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-GARPLPWTLRIKVAIGAARGLSF 202
H N++ + + Y+ + +E L++ + L RGL +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 144
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPTGDRTHVSTQVMGTRGYAAPE 261
+H A V++RD K SN+LL++ + K+ DFGLA+ A P D T + + TR Y APE
Sbjct: 145 IHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 262 YLATGR-LTAKCDVYSFGVVLLELLSGR 288
+ + T D++S G +L E+LS R
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V KG+ + ++ V + I + + E L+E N + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLD 70
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
+P +V++IG C + E+ +LV E G L +L + R + I++ + G+ +L
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAPE 261
E+ ++RD A N+LL ++ AK+SDFGL+KA D Q G + APE
Sbjct: 128 EES--NFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENXYKAQTHGKWPVKWYAPE 184
Query: 262 YLATGRLTAKCDVYSFGVVLLELLS 286
+ + ++K DV+SFGV++ E S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
+G GGFGYV + WI + T G +A+K+ + E ++E W E+ + +L+HP
Sbjct: 22 LGTGGFGYVLR-WIHQDT--------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 146 NLVKLIGFCLDGENRL-------LVYEYMPKGSLENHL--FRRGARPLPWTLRIKVAIGA 196
N+V DG +L L EY G L +L F +R ++
Sbjct: 73 NVVSAREVP-DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DI 130
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLD---SEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ L +LHE ++I+RD K NI+L K+ D G AK G+ + T+ +G
Sbjct: 131 SSALRYLHE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVG 185
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRR 289
T Y APE L + T D +SFG + E ++G R
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
+G GGFGYV + WI + T G +A+K+ + E ++E W E+ + +L+HP
Sbjct: 23 LGTGGFGYVLR-WIHQDT--------GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 146 NLVKLIGFCLDGENRL-------LVYEYMPKGSLENHL--FRRGARPLPWTLRIKVAIGA 196
N+V DG +L L EY G L +L F +R ++
Sbjct: 74 NVVSAREVP-DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DI 131
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLD---SEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ L +LHE ++I+RD K NI+L K+ D G AK G+ + T+ +G
Sbjct: 132 SSALRYLHE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVG 186
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRR 289
T Y APE L + T D +SFG + E ++G R
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 61 LSCPNLKAFTFSELKNATRNFRPDSL------IGEGGFGYVYKGWIDEHTLEAARPGVGM 114
L NL + + ++ TR+ P+ +G+G FG VYK A +
Sbjct: 13 LGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYK---------AQNKETSV 63
Query: 115 VIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLEN 174
+ A K + + + ++++ E++ L HPN+VKL+ N ++ E+ G+++
Sbjct: 64 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 123
Query: 175 HLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFG 234
+ RPL + V L++LH+ ++I+RD KA NIL + + KL+DFG
Sbjct: 124 VMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFG 180
Query: 235 LAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGR-----LTAKCDVYSFGVVLLEL 284
++ + S +GT + APE + K DV+S G+ L+E+
Sbjct: 181 VSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 130
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 131 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEVNYLGQL 142
++G+G FG V + A R G + A+K LK + + + E L L
Sbjct: 26 VLGKGSFGKV---------MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 143 HHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
P + + C +RL V EY+ G L H+ + G P + I GL
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI--GLF 134
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
FLH+ + +IYRD K N++LDSE + K++DFG+ K T + + GT Y APE
Sbjct: 135 FLHK--RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT--TREFCGTPDYIAPE 190
Query: 262 YLATGRLTAKCDVYSFGVVLLELLSGRRAVD 292
+A D +++GV+L E+L+G+ D
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 27/221 (12%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK----KLKPEGFQG 128
ELK+ +F S +G G G V+K + +P G+V+A K ++KP
Sbjct: 21 ELKD--DDFEKISELGAGNGGVVFK--------VSHKPS-GLVMARKLIHLEIKP---AI 66
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWT 187
+ + E+ L + + P +V G F DGE + + E+M GSL+ L + G +P
Sbjct: 67 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGR--IPEQ 123
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV 247
+ KV+I +GL++L E + ++++RD K SNIL++S KL DFG++ G D +
Sbjct: 124 ILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 178
Query: 248 STQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
+ +GTR Y +PE L + + D++S G+ L+E+ GR
Sbjct: 179 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 75
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 133
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 134 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 127
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 128 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 129
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 130 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 94
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 152
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 153 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 130
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 131 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 72
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 130
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 131 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIA 127
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 128 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 63
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 121
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 122 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 134
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 135 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG-FQGHKEWLSEVNYLGQLHHP 145
+G+G FG VY+G + + + +AVK + + E+L+E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IKVAIG 195
++V+L+G G+ L+V E M G L+++L R RP P TL+ I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+++L+ ++ ++RD A N ++ +F K+ DFG+ + D + +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRK 315
+ APE L G T D++SFGVVL E+ S AEQ PY G +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNE 239
Query: 316 LFRIMDIKLEGQY---PQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQLPPPRDP 369
+++ ++G Y P V L C K+RP+ E+++ L+ P P
Sbjct: 240 --QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS 134
K + ++F+ +G G FG V H + + G A+K LK E K+ +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRV-------HLIRSRHNG--RYYAMKVLKKEIVVRLKQ-VE 51
Query: 135 EVN----YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRI 190
N L + HP ++++ G D + ++ +Y+ G L + L R+ R P +
Sbjct: 52 HTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQR-FPNPVAK 109
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A L +LH + +IYRD K NILLD + K++DFG AK P V+
Sbjct: 110 FYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYX 162
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ GT Y APE ++T D +SFG+++ E+L+G
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + L+ +P +AVK LK + + + +SE+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--------------I 190
N++ L+G C ++ EY KG+L +L R L ++ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A ARG+ +L A ++ I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 206
Query: 251 VMGTRG-----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T G + APE L T + DV+SFGV+L E+ +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 127
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 128 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + L+ +P +AVK LK + + + +SE+ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--------------I 190
N++ L+G C ++ EY KG+L +L R L ++ +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A ARG+ +L A ++ I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 147 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 199
Query: 251 VMGTRG-----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T G + APE L T + DV+SFGV+L E+ +
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 205 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + L+ +P +AVK LK + + + +SE+ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--------------I 190
N++ L+G C ++ EY KG+L +L R L ++ +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A ARG+ +L A ++ I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 143 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 195
Query: 251 VMGTRG-----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T G + APE L T + DV+SFGV+L E+ +
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + L+ +P +AVK LK + + + +SE+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--------------I 190
N++ L+G C ++ EY KG+L +L R L ++ +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A ARG+ +L A ++ I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 206
Query: 251 VMGTRG-----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T G + APE L T + DV+SFGV+L E+ +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVG-----MVIAVKKLKPEGFQGHKEWL- 133
N + +G G FG V +EA G+G + +AVK LK KE L
Sbjct: 47 NLQFGKTLGAGAFGKV---------VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 134 SEVNYLGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--- 189
SE+ + L H N+V L+G C G L++ EY G L N L R+ L ++
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 190 -----------IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + A+G++FL A + I+RD A N+LL + AK+ DFGLA+
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
V + APE + T + DV+S+G++L E+ S
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 25/235 (10%)
Query: 61 LSCPNLKAFTFSELKNATRNFRPDSL------IGEGGFGYVYKGWIDEHTLEAARPGVGM 114
L NL + + ++ TR+ P+ +G+G FG VYK A +
Sbjct: 13 LGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYK---------AQNKETSV 63
Query: 115 VIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLEN 174
+ A K + + + ++++ E++ L HPN+VKL+ N ++ E+ G+++
Sbjct: 64 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 123
Query: 175 HLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFG 234
+ RPL + V L++LH+ ++I+RD KA NIL + + KL+DFG
Sbjct: 124 VMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFG 180
Query: 235 LAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGR-----LTAKCDVYSFGVVLLEL 284
+ + +GT + APE + K DV+S G+ L+E+
Sbjct: 181 V--SAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + L+ +P +AVK LK + + + +SE+ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--------------I 190
N++ L+G C ++ EY KG+L +L R L ++ +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A ARG+ +L A ++ I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 146 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 198
Query: 251 VMGTRG-----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T G + APE L T + DV+SFGV+L E+ +
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 75 KNATRNFRPDS---LIGE-GGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHK 130
++ TR+ P+ +IGE G FG VYK A ++ A K + + + +
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYK---------AQNKETSVLAAAKVIDTKSEEELE 52
Query: 131 EWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRI 190
+++ E++ L HPN+VKL+ N ++ E+ G+++ + RPL +
Sbjct: 53 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQ 111
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
V L++LH+ ++I+RD KA NIL + + KL+DFG++ A T
Sbjct: 112 VVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRTXIQRRDS 168
Query: 251 VMGTRGYAAPEYLATGR-----LTAKCDVYSFGVVLLEL 284
+GT + APE + K DV+S G+ L+E+
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+F+ LIG GGFG V+K +H ++ G +K++K + +E V L
Sbjct: 12 DFKEIELIGSGGFGQVFKA---KHRID------GKTYVIKRVKYNNEKAERE----VKAL 58
Query: 140 GQLHHPNLVKLIGFCLDGENR-----------------LLVYEYMPKGSLENHLFRRGAR 182
+L H N+V G C DG + + E+ KG+LE + +R
Sbjct: 59 AKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L L +++ +G+ ++H +++I RD K SNI L K+ DFGL +
Sbjct: 118 KLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 243 DRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
+ S GT Y +PE +++ + D+Y+ G++L ELL
Sbjct: 176 GKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 11/216 (5%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEW 132
++K +F ++G+G FG V+ + A + + + E K
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
LS HP L + EN V EY+ G L H+ + +
Sbjct: 71 LSLA-----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFY 123
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
A GL FLH + ++YRD K NILLD + + K++DFG+ K GD +
Sbjct: 124 AAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFC 179
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GT Y APE L + D +SFGV+L E+L G+
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVNYLGQL-HH 144
+G G FG V ++ + M +AVK LKP +E L SE+ L L +H
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-----GARPLPWTL----------- 188
N+V L+G C G L++ EY G L N L R+ ++ P +
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ + A+G++FL A + I+RD A NILL K+ DFGLA+ V
Sbjct: 163 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+S+G+ L EL S
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + L+ +P +AVK LK + + + +SE+ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--------------I 190
N++ L+G C ++ EY KG+L +L R L + +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A ARG+ +L A ++ I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 139 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 191
Query: 251 VMGTRG-----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T G + APE L T + DV+SFGV+L E+ +
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 146 LVSCTYQLARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVNYLGQL-HH 144
+G G FG V ++ + M +AVK LKP +E L SE+ L L +H
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-----GARPLPWTL----------- 188
N+V L+G C G L++ EY G L N L R+ ++ P +
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ + A+G++FL A + I+RD A NILL K+ DFGLA+ V
Sbjct: 147 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+S+G+ L EL S
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 138/303 (45%), Gaps = 52/303 (17%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG-FQGHKEWLSEVNYLGQLHHP 145
+G+G FG VY+G + + + +AVK + + E+L+E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IKVAIG 195
++V+L+G G+ L+V E M G L+++L R RP P TL+ I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+++L+ ++ ++RD A N ++ +F K+ DFG+ T D + G +
Sbjct: 139 IADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGM-----TRDIYETAYYRKGGK 191
Query: 256 G-----YAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
G + APE L G T D++SFGVVL E+ S AEQ PY
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQ 234
Query: 311 GDRRKLFRIMDIKLEGQY---PQKGAYMVAILALQCIS-EAKVRPSMSEVLSALEQLPPP 366
G + +++ ++G Y P V L C K+RP+ E+++ L+ P
Sbjct: 235 GLSNE--QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 292
Query: 367 RDP 369
P
Sbjct: 293 SFP 295
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 66
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 124
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 125 EGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 36/259 (13%)
Query: 76 NATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHK---EW 132
N NFR + IG G F VY+ AA G+ +A+KK++ K +
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYR---------AACLLDGVPVALKKVQIFDLMDAKARADC 79
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHL--FRRGARPLPWTLRI 190
+ E++ L QL+HPN++K ++ +V E G L + F++ R +P
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
K + L +H ++V++RD K +N+ + + KL D GL + + +T +
Sbjct: 140 KYFVQLCSALEHMH--SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHS 195
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
++GT Y +PE + K D++S G +L E+ + P+
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA------------------LQSPFY 237
Query: 311 GDRRKLFRIMDIKLEGQYP 329
GD+ L+ + + YP
Sbjct: 238 GDKMNLYSLCKKIEQCDYP 256
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVNYLGQL-HH 144
+G G FG V ++ + M +AVK LKP +E L SE+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-----GARPLPWTL----------- 188
N+V L+G C G L++ EY G L N L R+ ++ P +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ + A+G++FL A + I+RD A NILL K+ DFGLA+ V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+S+G+ L EL S
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVNYLGQL-HH 144
+G G FG V ++ + M +AVK LKP +E L SE+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-----GARPLPWTL----------- 188
N+V L+G C G L++ EY G L N L R+ ++ P +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ + A+G++FL A + I+RD A NILL K+ DFGLA+ V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+S+G+ L EL S
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVNYLGQL-HH 144
+G G FG V ++ + M +AVK LKP +E L SE+ L L +H
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR-----GARPLPWTL----------- 188
N+V L+G C G L++ EY G L N L R+ ++ P +
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ + A+G++FL A + I+RD A NILL K+ DFGLA+ V
Sbjct: 165 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+S+G+ L EL S
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + L+ +P +AVK LK + + + +SE+ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--------------I 190
N++ L+G C ++ EY KG+L +L R L ++ +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A ARG+ +L A ++ I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 195 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 247
Query: 251 VMGTRG-----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T G + APE L T + DV+SFGV+L E+ +
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + L+ +P +AVK LK + + + +SE+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR--------------I 190
N++ L+G C ++ EY KG+L +L R L + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
A ARG+ +L A ++ I+RD A N+L+ + K++DFGLA+ D H+
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYY 206
Query: 251 VMGTRG-----YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T G + APE L T + DV+SFGV+L E+ +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS--EVN 137
+F ++G+G FG V+ + RP G + A+K LK + + E +
Sbjct: 29 HFELLKVLGQGSFGKVFL------VRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 138 YLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLR-IKVAIG 195
L ++HP +VKL + E +L L+ +++ G L F R ++ + +T +K +
Sbjct: 83 ILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA 137
Query: 196 A-ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
A GL LH +IYRD K NILLD E + KL+DFGL+K ++ S GT
Sbjct: 138 ELALGLDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGT 193
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y APE + + D +S+GV++ E+L+G
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 151 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKK-LKPEGFQGHKEW-LSEVNYLGQLHH 144
IGEG +G V+K G ++A+KK L+ E K+ L E+ L QL H
Sbjct: 11 IGEGSYGVVFK---------CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
PNLV L+ LV+EY L H R R +P L + + ++F H
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
+ I+RD K NIL+ KL DFG A+ TG + +V TR Y +PE L
Sbjct: 120 K--HNCIHRDVKPENILITKHSVIKLCDFGFARL-LTGPSDYYDDEV-ATRWYRSPELLV 175
Query: 265 -TGRLTAKCDVYSFGVVLLELLSG 287
+ DV++ G V ELLSG
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 107/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ + Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPS-DSXQEYSDWKEKKTYLNPWKKI 233
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 148 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V G EH L + V ++ +K++ G + E+ L HP+
Sbjct: 19 LGVGTFGKVKIG---EHQLTGHKVAVK-ILNRQKIRSLDVVGKIK--REIQNLKLFRHPH 72
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
++KL + +V EY+ G L +++ + G R+ I +A + + H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA--VDYCHR- 129
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
V++RD K N+LLD+ NAK++DFGL+ G+ S G+ YAAPE + +G
Sbjct: 130 -HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVI-SG 184
Query: 267 RLTA--KCDVYSFGVVLLELLSGRRAVDKTRV 296
RL A + D++S GV+L LL G D V
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 69
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQ 127
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 128 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKG 185
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 186 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 228
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 229 LSNE--QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 285
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ EY KG+L +L R RP + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ +++DFGLA+ D +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 22/220 (10%)
Query: 76 NATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLS 134
+++ F+ +G G + VYKG G+ +A+K++K + +G +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKG---------LNKTTGVYVALKEVKLDSEEGTPSTAIR 52
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
E++ + +L H N+V+L + EN+L LV+E+M L+ ++ R P L + +
Sbjct: 53 EISLMKELKHENIVRLYD-VIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLV 110
Query: 194 ----IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
+GL+F HE ++++RD K N+L++ KL DFGLA+A T S
Sbjct: 111 KYFQWQLLQGLAFCHE--NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE 168
Query: 250 QVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGR 288
V T Y AP+ L R + D++S G +L E+++G+
Sbjct: 169 VV--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEIXINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+ +L+ + +KE L E
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIMELREATSPKANKEILDEAY 103
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 161
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 162 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEIXINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINAMLNHE 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEIXINKMLNHE 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 73
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 131
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFG AK ++ + + +
Sbjct: 132 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 78
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQ 136
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 137 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKG 194
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 195 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 237
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 238 LSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 294
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 13 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 63
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 121
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 122 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 232
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 129
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFG AK ++ + + +
Sbjct: 130 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 129
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFG AK ++ + + +
Sbjct: 130 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 49/236 (20%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
+F+ LIG GGFG V+K +H ++ G ++++K + + EV L
Sbjct: 13 DFKEIELIGSGGFGQVFKA---KHRID------GKTYVIRRVKYNNEKAER----EVKAL 59
Query: 140 GQLHHPNLVKLIGFCLDG-------------------ENR-----------LLVYEYMPK 169
+L H N+V G C DG EN + E+ K
Sbjct: 60 AKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 170 GSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAK 229
G+LE + +R L L +++ +G+ ++H +++I+RD K SNI L K
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH--SKKLIHRDLKPSNIFLVDTKQVK 176
Query: 230 LSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
+ DFGL + + T+ GT Y +PE +++ + D+Y+ G++L ELL
Sbjct: 177 IGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++ G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L++ + MP G L +++ R + + + A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 134
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 135 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++ G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 127
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 128 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 124 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS----PLQVAVKTL-PEV 72
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + +L+H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 73 CSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 71
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 129
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFG AK ++ + + +
Sbjct: 130 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 69
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 127
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFG AK ++ + + +
Sbjct: 128 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEA-ARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+GEG +G V ++ T EA A V M AV PE + E+ L+H
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDC--PENIK------KEICINKMLNHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+VK G +G + L EY G L + + P P R + A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+ +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE L
Sbjct: 123 I--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 266 GRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++ G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 134
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFGLAK ++ + + +
Sbjct: 135 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 80 NFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWLSEVN 137
F+ ++G G FG VYKG WI E V + +A+K+L+ + +KE L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGE------KVKIPVAIKELREATSPKANKEILDEAY 76
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA 197
+ + +P++ +L+G CL +L+ + MP G L +++ R + + + A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIA 134
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+G+++L + +++++RD A N+L+ + + K++DFG AK ++ + + +
Sbjct: 135 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A E + T + DV+S+GV + EL++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L + +I +L P Q + EV +
Sbjct: 13 NYRLLKTIGKGNFAKVK---LARHILTGREVAIK-IIDKTQLNPTSLQ---KLFREVRIM 65
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + L+ EY G + ++L G R R K
Sbjct: 66 KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFR-QIVSA 123
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H+ +++++RD KA N+LLD++ N K++DFG + G + G+ YAA
Sbjct: 124 VQYCHQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAA 178
Query: 260 PEYLATGRLTA-KCDVYSFGVVLLELLSG 287
PE + + DV+S GV+L L+SG
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG 125
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 86
Query: 126 F--QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
+ Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 87 YSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P+G + L + T
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 122 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 173
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 86
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + +L+H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 87 CSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V G EH L + V ++ +K++ G + E+ L HP+
Sbjct: 19 LGVGTFGKVKIG---EHQLTGHKVAVK-ILNRQKIRSLDVVGKIK--REIQNLKLFRHPH 72
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
++KL + +V EY+ G L +++ + G R+ I +A + + H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA--VDYCHR- 129
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
V++RD K N+LLD+ NAK++DFGL+ G+ S G+ YAAPE + +G
Sbjct: 130 -HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPEVI-SG 184
Query: 267 RLTA--KCDVYSFGVVLLELLSGRRAVDKTRV 296
RL A + D++S GV+L LL G D V
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 84
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQ 142
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 143 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 200
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 201 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 243
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 244 LSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 82
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 142
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 143 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 194
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T++ G
Sbjct: 117 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCG 168
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG-FQGHKEWLSEVNYLGQLHHP 145
+G+G FG VY+G + + + +AVK + + E+L+E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IKVAIG 195
++V+L+G G+ L+V E M G L+++L R RP P TL+ I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+++L+ ++ ++R+ A N ++ +F K+ DFG+ + D + +
Sbjct: 139 IADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L G T D++SFGVVL E+ S
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 84
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQ 142
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 143 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 200
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 201 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 243
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 244 LSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L + +I +L P Q + EV +
Sbjct: 16 NYRLLKTIGKGNFAKVK---LARHILTGREVAIK-IIDKTQLNPTSLQ---KLFREVRIM 68
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + L+ EY G + ++L G R R K
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFR-QIVSA 126
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H+ +++++RD KA N+LLD++ N K++DFG + G + G YAA
Sbjct: 127 VQYCHQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAA 181
Query: 260 PEYLATGRLTA-KCDVYSFGVVLLELLSG 287
PE + + DV+S GV+L L+SG
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ Y KG+L +L R RP + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ RT +S G
Sbjct: 118 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----G 169
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG-FQGHKEWLSEVNYLGQLHHP 145
+G+G FG VY+G + + + +AVK + + E+L+E + +
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IKVAIG 195
++V+L+G G+ L+V E M G L+++L R RP P TL+ I++A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+++L+ ++ ++R+ A N ++ +F K+ DFG+ + D + +
Sbjct: 140 IADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE L G T D++SFGVVL E+ S
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 75
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQ 133
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 134 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 191
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 192 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 234
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 235 LSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 291
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IGEG G V ++HT G +AVKK+ Q + +EV + HH N
Sbjct: 53 IGEGSTGIVCIA-TEKHT--------GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLF--RRGARPLPWTLRIKVAIGAARGLSFLH 204
+V + L G+ +V E++ G+L + + R + V + R LS+LH
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLH 158
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
Q VI+RD K+ +ILL S+ KLSDFG ++GT + APE ++
Sbjct: 159 N--QGVIHRDIKSDSILLTSDGRIKLSDFGF--CAQVSKEVPKRKXLVGTPYWMAPEVIS 214
Query: 265 TGRLTAKCDVYSFGVVLLELLSG 287
+ D++S G++++E++ G
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYV-YKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+G G FG V Y W ++ +A+K +K EG E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G C ++ EYM G L N+L R L +++ + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE- 137
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+Q ++RD A N L++ + K+SDFGL++ + T R ++ PE L
Sbjct: 138 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR-WSPPEVLMY 195
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
+ ++K D+++FGV++ E+ S
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYS 216
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 73
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 133
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 134 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 185
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 78
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQ 136
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 137 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 194
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 195 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 237
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 238 LSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 294
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHKEWLSEVNYLGQLHHP 145
IG+G FG V+KG ID T + V+A+K + E ++ E+ L Q
Sbjct: 31 IGKGSFGEVFKG-IDNRTQQ--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+ K G L G ++ EY+ GS + L R G P + +GL +LH
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAG--PFDEFQIATMLKEILKGLDYLHS 138
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
++ I+RD KA+N+LL + + KL+DFG+ AG D +GT + APE +
Sbjct: 139 EKK--IHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 266 GRLTAKCDVYSFGVVLLELLSGR 288
+K D++S G+ +EL G
Sbjct: 195 SAYDSKADIWSLGITAIELAKGE 217
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 77
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQ 135
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 136 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 193
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 194 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 236
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 237 LSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 293
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS----PLQVAVKTL-PEV 98
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 99 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 158
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 159 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 217 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 74
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPL--------PWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQ 132
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 133 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 190
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 191 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 233
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 234 LSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 290
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS----PLQVAVKTL-PEV 88
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 89 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 148
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 149 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 206
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 207 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 71
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQ 129
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 130 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 187
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 188 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 230
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 231 LSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 287
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 89/191 (46%), Gaps = 31/191 (16%)
Query: 126 FQGHKEWLSEVNYLGQ--LHHPNLVKLIGFCLDGENR----LLVYEYMPKGSLENHLFRR 179
Q + W SE + H NL++ I G N L+ + KGSL ++L
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL--- 104
Query: 180 GARPLPWTLRIKVAIGAARGLSFLHE---------AEQQVIYRDFKASNILLDSEFNAKL 230
+ W VA +RGLS+LHE + + +RDFK+ N+LL S+ A L
Sbjct: 105 KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVL 164
Query: 231 SDFGLAK----AGPTGDRTHVSTQVMGTRGYAAPEYLATG-----RLTAKCDVYSFGVVL 281
+DFGLA P GD TH +GTR Y APE L + D+Y+ G+VL
Sbjct: 165 ADFGLAVRFEPGKPPGD-THGQ---VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 220
Query: 282 LELLSGRRAVD 292
EL+S +A D
Sbjct: 221 WELVSRCKAAD 231
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 77
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQ 135
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N ++ +F K+ DFG+ + D +
Sbjct: 136 MAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 193
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 194 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 236
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 237 LSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 293
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L V +I +L Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHILTGKEVAV-RIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + LV EY G + ++L G R R K
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFR-QIVSA 125
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H+ + +++RD KA N+LLD++ N K++DFG + G++ + G+ YAA
Sbjct: 126 VQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAA 180
Query: 260 PEYLATGRLTA-KCDVYSFGVVLLELLSGRRAVD 292
PE + + DV+S GV+L L+SG D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 130/314 (41%), Gaps = 48/314 (15%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVN 137
+N +GEG FG V K H R G +AVK LK ++ LSE N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-TAFHL--KGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR------------------ 179
L Q++HP+++KL G C LL+ EY GSL L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 180 ----GARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGL 235
R L I A ++G+ +L AE ++++RD A NIL+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTR 295
++ D +Q + A E L T + DV+SFGV+L E+++
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------- 247
Query: 296 VGAEQNLVDWAKPYLG-DRRKLFRIMDIKLEGQYPQKGAYMVAILALQCI-SEAKVRPSM 353
+G PY G +LF ++ + P + + L LQC E RP
Sbjct: 248 LG--------GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF 299
Query: 354 SEVLSALEQLPPPR 367
+++ LE++ R
Sbjct: 300 ADISKDLEKMMVKR 313
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 118 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCG 169
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 71
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 72 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 131
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS----PLQVAVKTL-PEV 78
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 79 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 138
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 139 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 196
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 197 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS----PLQVAVKTL-PEV 72
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 73 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 71
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 72 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 131
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
L+H N+VK G +G + L EY G L + + P P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 262 YLATGRLTAK-CDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDW--AKPYLGDRRKL 316
L A+ DV+S G+VL +L+G D+ Q DW K YL +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 138/295 (46%), Gaps = 43/295 (14%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQGHKEWLSEVNYLGQLHHP 145
+G+G FG VY+G + V A+K + + + E+L+E + + + +
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRV----AIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IKVAIG 195
++V+L+G G+ L++ E M +G L+++L R RP P +L I++A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
A G+++L+ + ++RD A N ++ +F K+ DFG+ + D + +
Sbjct: 169 IADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRK 315
+ +PE L G T DV+SFGVVL E+ + AEQ PY G +
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNE 269
Query: 316 LFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 270 --QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 322
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L V +I +L Q + EV +
Sbjct: 8 NYRLLKTIGKGNFAKVK---LARHILTGKEVAVK-IIDKTQLNSSSLQ---KLFREVRIM 60
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + LV EY G + ++L G W + +
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----WMKEKEARAKFRQI 115
Query: 200 LSFLHEAEQQ-VIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
+S + Q+ +++RD KA N+LLD++ N K++DFG + G++ G+ YA
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 172
Query: 259 APEYLATGRLTA-KCDVYSFGVVLLELLSGRRAVD 292
APE + + DV+S GV+L L+SG D
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 63
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 64 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 123
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 124 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 181
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 182 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEV 136
A +F +G+G FG VY E R + + + K + E + EV
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLA------REKQRKFILALKVLFKAQLEKAGVEHQLRREV 56
Query: 137 NYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGA 196
L HPN+++L G+ D L+ EY P G++ L + T +
Sbjct: 57 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-- 114
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + GT
Sbjct: 115 ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 168
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
Y PE + K D++S GV+ E L G+
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHKEWLSEVNYLGQLHHP 145
IG+G FG V+KG ID T + V+A+K + E ++ E+ L Q P
Sbjct: 30 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+ K G L ++ EY+ GS + L G PL T + +GL +LH
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 137
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
++ I+RD KA+N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 138 EKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 266 GRLTAKCDVYSFGVVLLELLSGR 288
+K D++S G+ +EL G
Sbjct: 194 SAYDSKADIWSLGITAIELARGE 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVNYLGQL-HH 144
+GEG FG V + ++ +P + +AVK LK + + + +SE+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP----------------LPWTL 188
N++ L+G C ++ Y KG+L +L R RP + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYL--RARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
+ ARG+ +L A Q+ I+RD A N+L+ K++DFGLA+ D +
Sbjct: 159 LVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
T + APE L T + DV+SFGV++ E+ +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 122 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCG 173
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 117 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 168
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYV-YKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+G G FG V Y W ++ +A+K +K EG E++ E + L H
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 59
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G C ++ EYM G L N+L R L +++ + +L
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE- 117
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+Q ++RD A N L++ + K+SDFGL++ + T R ++ PE L
Sbjct: 118 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 175
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
+ ++K D+++FGV++ E+ S
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYS 196
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 86
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 87 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 146
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 122 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 173
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 122 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 173
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYV-YKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+G G FG V Y W ++ +A+K +K EG E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 79
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G C ++ EYM G L N+L R L +++ + +L
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE- 137
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+Q ++RD A N L++ + K+SDFGL++ + T R ++ PE L
Sbjct: 138 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 195
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
+ ++K D+++FGV++ E+ S
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYS 216
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 72
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 73 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 191 AQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 120 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 171
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 130/314 (41%), Gaps = 48/314 (15%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVN 137
+N +GEG FG V K H R G +AVK LK ++ LSE N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-TAFHL--KGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR------------------ 179
L Q++HP+++KL G C LL+ EY GSL L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 180 ----GARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGL 235
R L I A ++G+ +L AE ++++RD A NIL+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTR 295
++ D +Q + A E L T + DV+SFGV+L E+++
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------- 247
Query: 296 VGAEQNLVDWAKPYLG-DRRKLFRIMDIKLEGQYPQKGAYMVAILALQCI-SEAKVRPSM 353
+G PY G +LF ++ + P + + L LQC E RP
Sbjct: 248 LG--------GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF 299
Query: 354 SEVLSALEQLPPPR 367
+++ LE++ R
Sbjct: 300 ADISKDLEKMMVKR 313
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYV-YKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+G G FG V Y W ++ +A+K +K EG E++ E + L H
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 63
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G C ++ EYM G L N+L R L +++ + +L
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE- 121
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+Q ++RD A N L++ + K+SDFGL++ + T R ++ PE L
Sbjct: 122 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 179
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
+ ++K D+++FGV++ E+ S
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYS 200
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 117 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCG 168
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYV-YKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+G G FG V Y W ++ +A+K +K EG E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G C ++ EYM G L N+L R L +++ + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE- 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+Q ++RD A N L++ + K+SDFGL++ + T R ++ PE L
Sbjct: 123 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR-WSPPEVLMY 180
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
+ ++K D+++FGV++ E+ S
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 112
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 113 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 172
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 173 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 117 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCG 168
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 67 KAFTFSELKNATR-NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE- 124
K + S+LK R N +G G FG VY+G + + + + +AVK L PE
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP----LQVAVKTL-PEV 89
Query: 125 -GFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP 183
Q ++L E + + +H N+V+ IG L R ++ E M G L++ L RP
Sbjct: 90 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 149
Query: 184 -----LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL 235
L + VA A G +L E I+RD A N LL AK+ DFG+
Sbjct: 150 SQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 207
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
A+ M + PE G T+K D +SFGV+L E+ S
Sbjct: 208 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L V +I +L Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHILTGKEVAVK-IIDKTQLNSSSLQ---KLFREVRIM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + LV EY G + ++L G R R K
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFR-QIVSA 125
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H+ + +++RD KA N+LLD++ N K++DFG + G++ G+ YAA
Sbjct: 126 VQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAA 180
Query: 260 PEYLATGRLTA-KCDVYSFGVVLLELLSGRRAVD 292
PE + + DV+S GV+L L+SG D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 116 IAVKKLKPEGFQ-GHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLEN 174
+A+K++ E Q E L E+ + Q HHPN+V + + LV + + GS+ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 175 ---HLFRRGARP---LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNA 228
H+ +G L + + GL +LH+ Q I+RD KA NILL + +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSV 160
Query: 229 KLSDFGLAKAGPTG---DRTHVSTQVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLEL 284
+++DFG++ TG R V +GT + APE + R K D++SFG+ +EL
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 285 LSG 287
+G
Sbjct: 221 ATG 223
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 129/314 (41%), Gaps = 48/314 (15%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH-KEWLSEVN 137
+N +GEG FG V K H R G +AVK LK ++ LSE N
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-TAFHL--KGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR------------------ 179
L Q++HP+++KL G C LL+ EY GSL L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 180 ----GARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGL 235
R L I A ++G+ +L AE +++RD A NIL+ K+SDFGL
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 236 AKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTR 295
++ D +Q + A E L T + DV+SFGV+L E+++
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------- 247
Query: 296 VGAEQNLVDWAKPYLG-DRRKLFRIMDIKLEGQYPQKGAYMVAILALQCI-SEAKVRPSM 353
+G PY G +LF ++ + P + + L LQC E RP
Sbjct: 248 LG--------GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF 299
Query: 354 SEVLSALEQLPPPR 367
+++ LE++ R
Sbjct: 300 ADISKDLEKMMVKR 313
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L V +I +L Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHILTGKEVAVK-IIDKTQLNSSSLQ---KLFREVRIM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + LV EY G + ++L G R R K
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFR-QIVSA 125
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H+ + +++RD KA N+LLD++ N K++DFG + G++ G+ YAA
Sbjct: 126 VQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAA 180
Query: 260 PEYLATGRLTA-KCDVYSFGVVLLELLSGRRAVD 292
PE + + DV+S GV+L L+SG D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 116 IAVKKLKPEGFQ-GHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLEN 174
+A+K++ E Q E L E+ + Q HHPN+V + + LV + + GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 175 ---HLFRRGARP---LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNA 228
H+ +G L + + GL +LH+ Q I+RD KA NILL + +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSV 155
Query: 229 KLSDFGLAKAGPTG---DRTHVSTQVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLEL 284
+++DFG++ TG R V +GT + APE + R K D++SFG+ +EL
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 285 LSG 287
+G
Sbjct: 216 ATG 218
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYV-YKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+G G FG V Y W ++ +A+K +K EG E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G C ++ EYM G L N+L R L +++ + +L
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE- 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+Q ++RD A N L++ + K+SDFGL++ + T R ++ PE L
Sbjct: 123 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 180
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
+ ++K D+++FGV++ E+ S
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG--HKEWLSEVNYLGQLHH 144
+GE FG VYKG H A +A+K LK + +G +E+ E +L H
Sbjct: 34 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 88
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR------GARPLPWTLR--------I 190
PN+V L+G + +++ Y G L L R G+ T++ +
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
+ A G+ +L + V+++D N+L+ + N K+SD GL + D +
Sbjct: 149 HLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ + APE + G+ + D++S+GVVL E+ S
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L V +I +L Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHILTGKEVAV-RIIDKTQLNSSSLQ---KLFREVRIM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + LV EY G + ++L G R R K
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFR-QIVSA 125
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H+ + +++RD KA N+LLD++ N K++DFG + G++ G+ YAA
Sbjct: 126 VQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAA 180
Query: 260 PEYLATGRLTA-KCDVYSFGVVLLELLSGRRAVD 292
PE + + DV+S GV+L L+SG D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA-RPLPWTLRIK 191
L EV L L HPN++KL F D N LV E G L + + R + + IK
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDS-EFNA--KLSDFGLAKAGPTGDRTHVS 248
+ G+++LH + +++RD K N+LL+S E +A K+ DFGL+ +
Sbjct: 144 QVLS---GVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM--- 195
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ +GT Y APE L + KCDV+S GV+L LL+G
Sbjct: 196 KERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 87 IGEGGFGYV-YKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+G G FG V Y W ++ +A+K +K EG E++ E + L H
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----------VAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 70
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
LV+L G C ++ EYM G L N+L R L +++ + +L
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE- 128
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
+Q ++RD A N L++ + K+SDFGL++ + T R ++ PE L
Sbjct: 129 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMY 186
Query: 266 GRLTAKCDVYSFGVVLLELLS 286
+ ++K D+++FGV++ E+ S
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYS 207
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHKEWLSEVNYLGQLHHP 145
IG+G FG V+KG ID T + V+A+K + E ++ E+ L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+ K G L ++ EY+ GS + L G PL T + +GL +LH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
++ I+RD KA+N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 266 GRLTAKCDVYSFGVVLLELLSGR 288
+K D++S G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 76 NATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP-EGFQGHKEWLS 134
N + +F+ SL+GEG +G V A G ++A+KK++P + L
Sbjct: 8 NISSDFQLKSLLGEGAYGVV---------CSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E+ L H N++ + Y+ + ++ L R + + I+ I
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 195 -GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK---------AGPTGDR 244
R + LH + VI+RD K SN+L++S + K+ DFGLA+ + PTG +
Sbjct: 119 YQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 245 THVSTQVMGTRGYAAPEYLAT-GRLTAKCDVYSFGVVLLELLSGR 288
+ + T+ + TR Y APE + T + + DV+S G +L EL R
Sbjct: 177 SGM-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 82
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 142
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 143 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCG 194
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVN 137
N ++G G FG V ++ ++ GV + +AVK LK + +E L SE+
Sbjct: 45 ENLEFGKVLGSGAFGKV----MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 138 YLGQL-HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP------------- 183
+ QL H N+V L+G C L++EY G L N+L R R
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL--RSKREKFSEDEIEYENQK 158
Query: 184 ----------LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDF 233
L + + A A+G+ FL + ++RD A N+L+ K+ DF
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDF 216
Query: 234 GLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
GLA+ + V + APE L G T K DV+S+G++L E+ S
Sbjct: 217 GLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHKEWLSEVNYLGQLHHP 145
IG+G FG V+KG ID T + V+A+K + E ++ E+ L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+ K G L ++ EY+ GS + L G PL T + +GL +LH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 122
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
++ I+RD KA+N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 266 GRLTAKCDVYSFGVVLLELLSGR 288
+K D++S G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P+G + L + T
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 122 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXG 173
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 120 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 171
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 76 NATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP-EGFQGHKEWLS 134
N + +F+ SL+GEG +G V A G ++A+KK++P + L
Sbjct: 8 NISSDFQLKSLLGEGAYGVV---------CSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E+ L H N++ + Y+ + ++ L R + + I+ I
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 195 -GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK---------AGPTGDR 244
R + LH + VI+RD K SN+L++S + K+ DFGLA+ + PTG +
Sbjct: 119 YQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 245 THVSTQVMGTRGYAAPEYLAT-GRLTAKCDVYSFGVVLLELLSGR 288
+ + T+ + TR Y APE + T + + DV+S G +L EL R
Sbjct: 177 SGM-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 55
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 116 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 167
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 137/299 (45%), Gaps = 51/299 (17%)
Query: 87 IGEGGFGYVYKGWI-----DEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ 141
+G+G FG VY+G DE A V ++++ E+L+E + + +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE--------RIEFLNEASVMKE 71
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP--------LPWTLR--IK 191
+ ++V+L+G G+ L++ E M +G L+++L R RP P +L I+
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQ 129
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+A A G+++L+ + ++RD A N + +F K+ DFG+ + D +
Sbjct: 130 MAGEIADGMAYLNA--NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 187
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
+ + +PE L G T DV+SFGVVL E+ + AEQ PY G
Sbjct: 188 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQG 230
Query: 312 DRRKLFRIMDIKLEG---QYPQKGAYMVAILALQCIS-EAKVRPSMSEVLSAL-EQLPP 365
+ +++ +EG P M+ L C K+RPS E++S++ E++ P
Sbjct: 231 LSNE--QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 287
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L V +I +L Q + EV +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHILTGKEVAVK-IIDKTQLNSSSLQ---KLFREVRIM 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + LV EY G + ++L G R R K
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFR-QIVSA 125
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H+ + +++RD KA N+LLD++ N K++DFG + G++ G YAA
Sbjct: 126 VQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAA 180
Query: 260 PEYLATGRLTA-KCDVYSFGVVLLELLSGRRAVD 292
PE + + DV+S GV+L L+SG D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG--HKEWLSEVNYLGQLHH 144
+GE FG VYKG H A +A+K LK + +G +E+ E +L H
Sbjct: 17 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 71
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR------GARPLPWTLR--------I 190
PN+V L+G + +++ Y G L L R G+ T++ +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
+ A G+ +L + V+++D N+L+ + N K+SD GL + D +
Sbjct: 132 HLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ + APE + G+ + D++S+GVVL E+ S
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G G VY A G +A++++ + + ++E+ + + +PN
Sbjct: 28 IGQGASGTVYT---------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA-----RGLS 201
+V + L G+ +V EY+ GSL + + T + I A + L
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALE 130
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
FLH QVI+RD K+ NILL + + KL+DFG A T +++ ST V GT + APE
Sbjct: 131 FLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSTMV-GTPYWMAPE 186
Query: 262 YLATGRLTAKCDVYSFGVVLLELLSGR 288
+ K D++S G++ +E++ G
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 117 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCG 168
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
D +G G FG V +G + + + I V K E +E + E + QL
Sbjct: 15 DIELGCGNFGSVRQG-----VYRMRKKQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLD 68
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP-LPWTLRIKVAIGAARGLSF 202
+P +V+LIG C E +LV E G L H F G R +P + ++ + G+ +
Sbjct: 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVSMGMKY 125
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR--GYAAP 260
L E + ++RD A N+LL + AK+SDFGL+KA D ++ + + G + AP
Sbjct: 126 LEE--KNFVHRDLAARNVLLVNRHYAKISDFGLSKA-LGADDSYYTARSAGKWPLKWYAP 182
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLS 286
E + + +++ DV+S+GV + E LS
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 60
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R T + G
Sbjct: 121 L--ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCG 172
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIK 191
L EV L QL HPN++KL F D N LV E G L + + R+ + + +K
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVS 248
+ G ++LH + +++RD K N+LL+S+ K+ DFGL+ G +
Sbjct: 112 QVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 163
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ +GT Y APE L + KCDV+S GV+L LL G
Sbjct: 164 KERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHKEWLSEVNYLGQLHHP 145
IG+G FG V+KG ID T + V+A+K + E ++ E+ L Q P
Sbjct: 35 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+ K G L ++ EY+ GS + L G PL T + +GL +LH
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 142
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
++ I+RD KA+N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 143 EKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 266 GRLTAKCDVYSFGVVLLELLSGR 288
+K D++S G+ +EL G
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEVNYLGQL 142
++G+G FG V + + R G + AVK LK + + + E L
Sbjct: 348 VLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 143 HHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
P + + C +RL V EY+ G L H+ + G P + I A GL
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI--AIGLF 456
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
FL + +IYRD K N++LDSE + K++DFG+ K T + GT Y APE
Sbjct: 457 FLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPE 512
Query: 262 YLATGRLTAKCDVYSFGVVLLELLSGR 288
+A D ++FGV+L E+L+G+
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL--KPEGFQGHKEWLSEVNYLGQLH 143
L+GEG +G V K G ++A+KK + K + E+ L QL
Sbjct: 32 LVGEGSYGMVMK---------CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLEN-HLFRRGARPLPWTLRIKVAIGAARGLSF 202
H NLV L+ C + LV+E++ L++ LF G L + + K G+ F
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGF 139
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK--AGPTGDRTHVSTQVMGTRGYAAP 260
H +I+RD K NIL+ KL DFG A+ A P V + TR Y AP
Sbjct: 140 CH--SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP----GEVYDDEVATRWYRAP 193
Query: 261 EYLATGRLTAK-CDVYSFGVVLLELLSG 287
E L K DV++ G ++ E+ G
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIK 191
L EV L QL HPN++KL F D N LV E G L + + R+ + + +K
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVS 248
+ G ++LH + +++RD K N+LL+S+ K+ DFGL+ G +
Sbjct: 129 QVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 180
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ +GT Y APE L + KCDV+S GV+L LL G
Sbjct: 181 KERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
++ ++G+G FG V + + + V VI+ +++K + + L EV L
Sbjct: 28 YKGQRVLGKGSFGEVI---LCKDKITGQECAVK-VISKRQVKQK--TDKESLLREVQLLK 81
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
QL HPN++KL F D LV E G L + + R + ++ G+
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGI 139
Query: 201 SFLHEAEQQVIYRDFKASNILLDS---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+++H + ++++RD K N+LL+S + N ++ DFGL+ + +GT Y
Sbjct: 140 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYY 194
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
APE L G KCDV+S GV+L LLSG
Sbjct: 195 IAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L EV L +L HPN++KL D + +V E G L + + +R RI
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDS---EFNAKLSDFGLAKAGPTGDRTHVST 249
+ + G++++H + +++RD K NILL+S + + K+ DFGL+ +
Sbjct: 129 QVFS--GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--- 181
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+GT Y APE L G KCDV+S GV+L LLSG
Sbjct: 182 DRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
++ ++G+G FG V + + + V VI+ +++K + + L EV L
Sbjct: 51 YKGQRVLGKGSFGEVI---LCKDKITGQECAV-KVISKRQVKQK--TDKESLLREVQLLK 104
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
QL HPN++KL F D LV E G L + + R + ++ G+
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGI 162
Query: 201 SFLHEAEQQVIYRDFKASNILLDS---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+++H + ++++RD K N+LL+S + N ++ DFGL+ + +GT Y
Sbjct: 163 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGTAYY 217
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
APE L G KCDV+S GV+L LLSG
Sbjct: 218 IAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
++ ++G+G FG V + + + V VI+ +++K + + L EV L
Sbjct: 52 YKGQRVLGKGSFGEVI---LCKDKITGQECAV-KVISKRQVKQK--TDKESLLREVQLLK 105
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
QL HPN++KL F D LV E G L + + R + ++ G+
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGI 163
Query: 201 SFLHEAEQQVIYRDFKASNILLDS---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+++H + ++++RD K N+LL+S + N ++ DFGL+ + +GT Y
Sbjct: 164 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGTAYY 218
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
APE L G KCDV+S GV+L LLSG
Sbjct: 219 IAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L EV L +L HPN++KL D + +V E G L + + +R RI
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDS---EFNAKLSDFGLAKAGPTGDRTHVST 249
+ + G++++H + +++RD K NILL+S + + K+ DFGL+ +
Sbjct: 129 QVFS--GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---K 181
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+GT Y APE L G KCDV+S GV+L LLSG
Sbjct: 182 DRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L EV L +L HPN++KL D + +V E G L + + +R RI
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDS---EFNAKLSDFGLAKAGPTGDRTHVST 249
+ + G++++H + +++RD K NILL+S + + K+ DFGL+ +
Sbjct: 129 QVFS--GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---K 181
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+GT Y APE L G KCDV+S GV+L LLSG
Sbjct: 182 DRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
++ ++G+G FG V + + + V VI+ +++K + + L EV L
Sbjct: 34 YKGQRVLGKGSFGEVI---LCKDKITGQECAVK-VISKRQVKQK--TDKESLLREVQLLK 87
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
QL HPN++KL F D LV E G L + + R + ++ G+
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGI 145
Query: 201 SFLHEAEQQVIYRDFKASNILLDS---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
+++H + ++++RD K N+LL+S + N ++ DFGL+ + +GT Y
Sbjct: 146 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGTAYY 200
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
APE L G KCDV+S GV+L LLSG
Sbjct: 201 IAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHK-EWLS 134
AT + P + IG G +G VYK A P G +A+K ++ P G +G +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 135 EVNYLGQLH---HPNLVKLIGFC----LDGENRL-LVYEYMPKGSLENHLFRRGARPLPW 186
EV L +L HPN+V+L+ C D E ++ LV+E++ + L +L + LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 187 TLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTH 246
+ RGL FLH +++RD K NIL+ S KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 166
Query: 247 VSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
V+ T Y APE L D++S G + E+
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K+++FG + P+ R T + G
Sbjct: 119 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCG 170
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 21/224 (9%)
Query: 72 SELKNATRNFRPDSLI------GEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG 125
ELK+ + D+L+ G G FG V +G + + + I V K E
Sbjct: 323 EELKDKKLFLKRDNLLIADIELGCGNFGSVRQG-----VYRMRKKQIDVAIKVLKQGTEK 377
Query: 126 FQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARP-L 184
+E + E + QL +P +V+LIG C E +LV E G L H F G R +
Sbjct: 378 -ADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL--HKFLVGKREEI 433
Query: 185 PWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDR 244
P + ++ + G+ +L E + ++R+ A N+LL + AK+SDFGL+KA D
Sbjct: 434 PVSNVAELLHQVSMGMKYLEE--KNFVHRNLAARNVLLVNRHYAKISDFGLSKA-LGADD 490
Query: 245 THVSTQVMGT--RGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
++ + + G + APE + + +++ DV+S+GV + E LS
Sbjct: 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVNY 138
+F+ +L+G+G F VY+ E+ G+ + I + K G + + +EV
Sbjct: 12 DFKVGNLLGKGSFAGVYRA-------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 139 LGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAAR 198
QL HP++++L + D LV E G + +L R +P
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIIT 123
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
G+ +LH +++RD SN+LL N K++DFGLA H + + GT Y
Sbjct: 124 GMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYI 179
Query: 259 APEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQN---LVDWAKP 308
+PE + DV+S G + LL GR D V N L D+ P
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP 232
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 119 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCG 170
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHK-EWLS 134
AT + P + IG G +G VYK A P G +A+K ++ P G +G +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 135 EVNYLGQLH---HPNLVKLIGFC----LDGENRL-LVYEYMPKGSLENHLFRRGARPLPW 186
EV L +L HPN+V+L+ C D E ++ LV+E++ + L +L + LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 187 TLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTH 246
+ RGL FLH +++RD K NIL+ S KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 166
Query: 247 VSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
V+ T Y APE L D++S G + E+
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 118 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCG 169
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 73 ELKNATRNFRPDSL------IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF 126
E ++ R+ P+ + +G+G FG VYK A G + A K ++ +
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYK---------AKNKETGALAAAKVIETKSE 57
Query: 127 QGHKEWLSEVNYLGQLHHPNLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLP 185
+ ++++ E+ L HP +VKL+G + DG+ +++ E+ P G+++ + R L
Sbjct: 58 EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI-EFCPGGAVDAIMLELD-RGLT 115
Query: 186 WTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRT 245
V L+FLH +++I+RD KA N+L+ E + +L+DFG++ +
Sbjct: 116 EPQIQVVCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173
Query: 246 HVSTQVMGTRGYAAPEYLATGRLTA-----KCDVYSFGVVLLEL 284
S +GT + APE + + K D++S G+ L+E+
Sbjct: 174 RDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL---------AREKNSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 117 L--ANALSYCH--SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCG 168
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 120 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCG 171
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEVNYLGQL 142
++G+G FG V + + R G + AVK LK + + + E L
Sbjct: 27 VLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 143 HHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
P + + C +RL V EY+ G L H+ + G P + I A GL
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI--AIGLF 135
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
FL + +IYRD K N++LDSE + K++DFG+ K T + GT Y APE
Sbjct: 136 FLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPE 191
Query: 262 YLATGRLTAKCDVYSFGVVLLELLSGR 288
+A D ++FGV+L E+L+G+
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPW----------TLR--IK 191
N+V L+G C G +++ E+ G+L +L + +P+ TL I
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+ A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 153 YSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP----EGFQGHKEWLSEVNYLGQ 141
++G+GG+G V++ + G + A+K LK + +E N L +
Sbjct: 24 VLGKGGYGKVFQ------VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 142 LHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
+ HP +V LI G L+ EY+ G L L R G I A G
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG-- 135
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAG-PTGDRTHVSTQVMGTRGYAAP 260
H ++ +IYRD K NI+L+ + + KL+DFGL K G TH GT Y AP
Sbjct: 136 --HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCGTIEYMAP 190
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSG 287
E L D +S G ++ ++L+G
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 76 NATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP-EGFQGHKEWLS 134
N + +F+ SL+GEG +G V A G ++A+KK++P + L
Sbjct: 8 NISSDFQLKSLLGEGAYGVV---------CSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E+ L H N++ + Y+ + ++ L R + + I+ I
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 195 -GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK---------AGPTGDR 244
R + LH + VI+RD K SN+L++S + K+ DFGLA+ + PTG +
Sbjct: 119 YQTLRAVKVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 245 THVSTQVMGTRGYAAPEYLAT-GRLTAKCDVYSFGVVLLELLSGR 288
+ + + + TR Y APE + T + + DV+S G +L EL R
Sbjct: 177 SGM-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K+++FG + P+ R T + G
Sbjct: 120 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCG 171
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHK-EWLS 134
AT + P + IG G +G VYK A P G +A+K ++ P G +G +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 135 EVNYLGQLH---HPNLVKLIGFC----LDGENRL-LVYEYMPKGSLENHLFRRGARPLPW 186
EV L +L HPN+V+L+ C D E ++ LV+E++ + L +L + LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 187 TLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTH 246
+ RGL FLH +++RD K NIL+ S KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 166
Query: 247 VSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
V+ T Y APE L D++S G + E+
Sbjct: 167 ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF------QGHKEWLSEVNYL 139
++G+GG+G V++ + G + A+K LK H + +E N L
Sbjct: 24 VLGKGGYGKVFQ------VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK--AERNIL 75
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
++ HP +V LI G L+ EY+ G L L R G I A G
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
H ++ +IYRD K NI+L+ + + KL+DFGL K D T V+ GT Y A
Sbjct: 136 ----HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHXFCGTIEYMA 189
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSG 287
PE L D +S G ++ ++L+G
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
E + L +++HP +VKL + E +L L+ +++ G L F R ++ + +T
Sbjct: 76 ERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 130
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
A L+ H +IYRD K NILLD E + KL+DFGL+K + D + G
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCG 188
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
T Y APE + T D +SFGV++ E+L+G
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEV 136
F L+G+G FG V + G A+K LK E E L+E
Sbjct: 152 EFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 202
Query: 137 NYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
L HP L L + +RL V EY G L HL R I
Sbjct: 203 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 261
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+A L +LH +E+ V+YRD K N++LD + + K++DFGL K G T + GT
Sbjct: 262 SA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTP 316
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE L D + GVV+ E++ GR
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEV 136
F L+G+G FG V + G A+K LK E E L+E
Sbjct: 149 EFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 199
Query: 137 NYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
L HP L L + +RL V EY G L HL R I
Sbjct: 200 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 258
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+A L +LH +E+ V+YRD K N++LD + + K++DFGL K G T + GT
Sbjct: 259 SA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTP 313
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE L D + GVV+ E++ GR
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPW-----------TLR--I 190
N+V L+G C G +++ E+ G+L +L + +P+ TL I
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
+ A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 152 CYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G G VY A G +A++++ + + ++E+ + + +PN
Sbjct: 28 IGQGASGTVYT---------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA-----RGLS 201
+V + L G+ +V EY+ GSL + + T + I A + L
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALE 130
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGL-AKAGPTGDRTHVSTQVMGTRGYAAP 260
FLH QVI+RD K+ NILL + + KL+DFG A+ P + ++++GT + AP
Sbjct: 131 FLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAP 185
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGR 288
E + K D++S G++ +E++ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPWTLR-------------- 189
N+V L+G C G +++ E+ G+L +L + +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTL 188
H+E +E++ L L HPN++KL D + LV E+ G L + R
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE---FNAKLSDFGL----AKAGPT 241
I I + G+ +LH + +++RD K NILL+++ N K+ DFGL +K
Sbjct: 150 NIMKQILS--GICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
DR +GT Y APE L + KCDV+S GV++ LL G
Sbjct: 206 RDR-------LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 120 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCG 171
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 117 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCG 168
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
E + L +++HP +VKL + E +L L+ +++ G L F R ++ + +T
Sbjct: 76 ERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 130
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
A L+ H +IYRD K NILLD E + KL+DFGL+K + D + G
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
T Y APE + T D +SFGV++ E+L+G
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
E + L +++HP +VKL + E +L L+ +++ G L F R ++ + +T
Sbjct: 77 ERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 131
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
A L+ H +IYRD K NILLD E + KL+DFGL+K + D + G
Sbjct: 132 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 189
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
T Y APE + T D +SFGV++ E+L+G
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPW--------TLR--IKVA 193
N+V L+G C G +++ E+ G+L +L + +P+ TL I +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 114 MVIAVKKLKPEGFQGHKEWLS-EVNYLGQLH-HPNLVKLIGFCLDGENRLLVYEYMPKGS 171
M + ++L PE + +E E + L Q+ HP+++ LI LV++ M KG
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 172 LENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLS 231
L ++L + A T I ++ A +SFLH +++RD K NILLD +LS
Sbjct: 187 LFDYLTEKVALSEKETRSIMRSLLEA--VSFLHA--NNIVHRDLKPENILLDDNMQIRLS 242
Query: 232 DFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGR------LTAKCDVYSFGVVLLELL 285
DFG + G++ ++ GT GY APE L + D+++ GV+L LL
Sbjct: 243 DFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 286 SG 287
+G
Sbjct: 300 AG 301
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEVNYLGQL 142
L+G+G FG V + G A+K LK E E L+E L
Sbjct: 17 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 143 HHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
HP L L + +RL V EY G L HL R I +A L
Sbjct: 68 RHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LD 124
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
+LH +E+ V+YRD K N++LD + + K++DFGL K G T GT Y APE
Sbjct: 125 YLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPE 181
Query: 262 YLATGRLTAKCDVYSFGVVLLELLSGR 288
L D + GVV+ E++ GR
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 24/222 (10%)
Query: 74 LKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQGHK-- 130
L A + + + IGEG +G V+K + G G +A+K+++ + G +G
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA-------RDLKNG-GRFVALKRVRVQTGEEGMPLS 57
Query: 131 --EWLSEVNYLGQLHHPNLVKLIGFCL----DGENRL-LVYEYMPKGSLENHLFRRGARP 183
++ + +L HPN+V+L C D E +L LV+E++ + L +L +
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG 116
Query: 184 LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
+P + RGL FLH +V++RD K NIL+ S KL+DFGLA+
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF-- 172
Query: 244 RTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
T V+ T Y APE L D++S G + E+
Sbjct: 173 -QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWLSEVNYLGQLH 143
+G+G FG VY A ++A+K K + E + EV L
Sbjct: 20 LGKGKFGNVYL---------ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
HPN+++L G+ D L+ EY P G++ L + T + A LS+
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYC 128
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYL 263
H ++VI+RD K N+LL S K++DFG + P+ R T + GT Y PE +
Sbjct: 129 HS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 182
Query: 264 ATGRLTAKCDVYSFGVVLLELLSG 287
K D++S GV+ E L G
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS 134
KN R +R ++G+GGFG V + A + ++K + + +G L+
Sbjct: 183 KNTFRQYR---VLGKGGFGEVCACQV------RATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E L +++ +V L + LV M G L+ H++ G P + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
GL LH ++++YRD K NILLD + ++SD GLA P G +GT
Sbjct: 294 EICCGLEDLHR--ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGT 348
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GY APE + R T D ++ G +L E+++G+
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS 134
KN R +R ++G+GGFG V + A + ++K + + +G L+
Sbjct: 183 KNTFRQYR---VLGKGGFGEVCACQV------RATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E L +++ +V L + LV M G L+ H++ G P + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
GL LH ++++YRD K NILLD + ++SD GLA P G +GT
Sbjct: 294 EICCGLEDLHR--ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGT 348
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GY APE + R T D ++ G +L E+++G+
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+GEG FG V T + V + ++L + H E++YL L HP+
Sbjct: 17 LGEGSFGKVKLA-----THYKTQQKVALKFISRQLLKKS-DMHMRVEREISYLKLLRHPH 70
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
++KL + ++V EY G L +++ + R I A + + H
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHR- 126
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
++++RD K N+LLD N K++DFGL+ G+ S G+ YAAPE + G
Sbjct: 127 -HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI-NG 181
Query: 267 RLTA--KCDVYSFGVVLLELLSGRRAVD 292
+L A + DV+S G+VL +L GR D
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEV 136
+F +IG+G FG V L A + AVK L+ + KE +SE
Sbjct: 39 DFHFLKVIGKGSFGKV---------LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 137 NYL-GQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
N L + HP LV L F ++L V +Y+ G L HL R P I
Sbjct: 90 NVLLKNVKHPFLVGL-HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEI 148
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A G +LH ++YRD K NILLDS+ + L+DFGL K + T ++ GT
Sbjct: 149 ASALG--YLHSL--NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGT 202
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y APE L D + G VL E+L G
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G G VY A G +A++++ + + ++E+ + + +PN
Sbjct: 29 IGQGASGTVYT---------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA-----RGLS 201
+V + L G+ +V EY+ GSL + + T + I A + L
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALE 131
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
FLH QVI+R+ K+ NILL + + KL+DFG A T +++ ST V GT + APE
Sbjct: 132 FLHS--NQVIHRNIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSTMV-GTPYWMAPE 187
Query: 262 YLATGRLTAKCDVYSFGVVLLELLSGR 288
+ K D++S G++ +E++ G
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGH--KEWLSEV 136
+ F ++G+G FG V + + + G + +AVK LK + +E+L E
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQED------GSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 137 NYLGQLHHPNLVKLIGFCLDGENR------LLVYEYMPKGSLENHLF--RRGARP--LPW 186
+ + HP++ KL+G L + +++ +M G L L R G P LP
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 187 TLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTH 246
++ + A G+ +L + + I+RD A N +L + ++DFGL++ +GD
Sbjct: 137 QTLVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194
Query: 247 VSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ A E LA T DV++FGV + E+++
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 120 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCG 171
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPW--------TLR--IKVA 193
N+V L+G C G +++ E+ G+L +L + +P+ TL I +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 151 FQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPWTLR-------------- 189
N+V L+G C G +++ E+ G+L +L + +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 15/214 (7%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+R IG+G F V + H L V +I +L Q + EV
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHILTGKEVAV-KIIDKTQLNSSSLQ---KLFREVRIX 67
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
L+HPN+VKL + LV EY G + ++L G R R K
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHG-RXKEKEARAKFR-QIVSA 125
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
+ + H+ + +++RD KA N+LLD++ N K++DFG + G++ G YAA
Sbjct: 126 VQYCHQ--KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAA 180
Query: 260 PEYLATGRLTA-KCDVYSFGVVLLELLSGRRAVD 292
PE + + DV+S GV+L L+SG D
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWL 133
A +F +G+G FG VY A ++A+K K + E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL---------AREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
EV L HPN+++L G+ D L+ EY P G++ L + T
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+ A LS+ H ++VI+RD K N+LL S K++DFG + P+ R + G
Sbjct: 117 L--ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCG 168
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
T Y PE + K D++S GV+ E L G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G G VY A G +A++++ + + ++E+ + + +PN
Sbjct: 28 IGQGASGTVYT---------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA-----RGLS 201
+V + L G+ +V EY+ GSL + + T + I A + L
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALE 130
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
FLH QVI+RD K+ NILL + + KL+DFG A T +++ S V GT + APE
Sbjct: 131 FLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSXMV-GTPYWMAPE 186
Query: 262 YLATGRLTAKCDVYSFGVVLLELLSGR 288
+ K D++S G++ +E++ G
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 19/213 (8%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEV 136
F L+G+G FG V + G A+K LK E E L+E
Sbjct: 9 EFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 59
Query: 137 NYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
L HP L L + +RL V EY G L HL R I
Sbjct: 60 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+A L +LH +E+ V+YRD K N++LD + + K++DFGL K G T GT
Sbjct: 119 SA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTP 173
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE L D + GVV+ E++ GR
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G G VY A G +A++++ + + ++E+ + + +PN
Sbjct: 29 IGQGASGTVYT---------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA-----RGLS 201
+V + L G+ +V EY+ GSL + + T + I A + L
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALE 131
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
FLH QVI+RD K+ NILL + + KL+DFG A T +++ S V GT + APE
Sbjct: 132 FLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSXMV-GTPYWMAPE 187
Query: 262 YLATGRLTAKCDVYSFGVVLLELLSGR 288
+ K D++S G++ +E++ G
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 19/213 (8%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEV 136
F L+G+G FG V + G A+K LK E E L+E
Sbjct: 10 EFEYLKLLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 60
Query: 137 NYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
L HP L L + +RL V EY G L HL R I
Sbjct: 61 RVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 119
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+A L +LH +E+ V+YRD K N++LD + + K++DFGL K G T GT
Sbjct: 120 SA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTP 174
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE L D + GVV+ E++ GR
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 116 IAVKKLKPEGFQGHKEWLS---EVNYLGQLHHPNLVKLIGFCLDGENRL-------LVYE 165
+AVK L+ + + +L E L+HP +V + GE +V E
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT---GEAETPAGPLPYIVME 96
Query: 166 YMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE 225
Y+ +L + + G P+ I+V A + L+F H+ +I+RD K +NIL+ +
Sbjct: 97 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANILISAT 152
Query: 226 FNAKLSDFGLAKA-GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLEL 284
K+ DFG+A+A +G+ + V+GT Y +PE + A+ DVYS G VL E+
Sbjct: 153 NAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 285 LSG 287
L+G
Sbjct: 213 LTG 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPWTLR-------------- 189
N+V L+G C G +++ E+ G+L +L + +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPWTLR-------------- 189
N+V L+G C G +++ E+ G+L +L + +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
++ ++G+G FG V + + + V VI+ +++K + + L EV L
Sbjct: 28 YKGQRVLGKGSFGEVI---LCKDKITGQECAV-KVISKRQVKQK--TDKESLLREVQLLK 81
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
QL HPN+ KL F D LV E G L + + R + ++ G+
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGI 139
Query: 201 SFLHEAEQQVIYRDFKASNILLDS---EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
++ H + ++++RD K N+LL+S + N ++ DFGL+ + +GT Y
Sbjct: 140 TYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---XKDKIGTAYY 194
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
APE L G KCDV+S GV+L LLSG
Sbjct: 195 IAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 31/209 (14%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG VYK A G + A K ++ + + ++++ E+ L HP
Sbjct: 19 LGDGAFGKVYK---------AKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 147 LVKLIG-FCLDGENRLLVYEYMPKGSLENHLFR--RG-ARPLPWTLRIKVAI-GAARGLS 201
+VKL+G + DG+ +++ E+ P G+++ + RG P +I+V L+
Sbjct: 70 IVKLLGAYYHDGKLWIMI-EFCPGGAVDAIMLELDRGLTEP-----QIQVVCRQMLEALN 123
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGL-AKAGPTGDRTHVSTQVMGTRGYAAP 260
FLH +++I+RD KA N+L+ E + +L+DFG+ AK T + +GT + AP
Sbjct: 124 FLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPYWMAP 178
Query: 261 EYLATGRLTA-----KCDVYSFGVVLLEL 284
E + + K D++S G+ L+E+
Sbjct: 179 EVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 24/222 (10%)
Query: 74 LKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQGH--- 129
L A + + + IGEG +G V+K + G G +A+K+++ + G +G
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA-------RDLKNG-GRFVALKRVRVQTGEEGMPLS 57
Query: 130 -KEWLSEVNYLGQLHHPNLVKLIGFCL----DGENRL-LVYEYMPKGSLENHLFRRGARP 183
++ + +L HPN+V+L C D E +L LV+E++ + L +L +
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG 116
Query: 184 LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
+P + RGL FLH +V++RD K NIL+ S KL+DFGLA+
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF-- 172
Query: 244 RTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
T V+ T Y APE L D++S G + E+
Sbjct: 173 -QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPWTLR-------------- 189
N+V L+G C G +++ E+ G+L +L + +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVNYLGQLHHP 145
+G G FG D H +E G+ VI K + + Q E + +E+ L L HP
Sbjct: 30 LGSGAFG-------DVHLVEERSSGLERVI--KTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGAR--PLPWTLRIKVAIGAARGLSFL 203
N++K+ D N +V E G L + AR L ++ L++
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 204 HEAEQQVIYRDFKASNILL-DSEFNA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
H Q V+++D K NIL D+ ++ K+ DFGLA+ + + ST GT Y AP
Sbjct: 141 H--SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAP 195
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKP 308
E +T KCD++S GVV+ LL+G T + Q + +P
Sbjct: 196 EVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 24/222 (10%)
Query: 74 LKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQGH--- 129
L A + + + IGEG +G V+K + G G +A+K+++ + G +G
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA-------RDLKNG-GRFVALKRVRVQTGEEGMPLS 57
Query: 130 -KEWLSEVNYLGQLHHPNLVKLIGFCL----DGENRL-LVYEYMPKGSLENHLFRRGARP 183
++ + +L HPN+V+L C D E +L LV+E++ + L +L +
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG 116
Query: 184 LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
+P + RGL FLH +V++RD K NIL+ S KL+DFGLA+
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF-- 172
Query: 244 RTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
T V+ T Y APE L D++S G + E+
Sbjct: 173 -QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 116 IAVKKLKPEGFQGHKEWLS---EVNYLGQLHHPNLVKLIGFCLDGENRL-------LVYE 165
+AVK L+ + + +L E L+HP +V + GE +V E
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYAT---GEAETPAGPLPYIVME 96
Query: 166 YMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE 225
Y+ +L + + G P+ I+V A + L+F H+ +I+RD K +NI++ +
Sbjct: 97 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISAT 152
Query: 226 FNAKLSDFGLAKA-GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLEL 284
K+ DFG+A+A +G+ + V+GT Y +PE + A+ DVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 285 LSG 287
L+G
Sbjct: 213 LTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 116 IAVKKLKPEGFQGHKEWLS---EVNYLGQLHHPNLVKLIGFCLDGENRL-------LVYE 165
+AVK L+ + + +L E L+HP +V + GE +V E
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT---GEAETPAGPLPYIVME 96
Query: 166 YMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE 225
Y+ +L + + G P+ I+V A + L+F H+ +I+RD K +NI++ +
Sbjct: 97 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISAT 152
Query: 226 FNAKLSDFGLAKA-GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLEL 284
K+ DFG+A+A +G+ + V+GT Y +PE + A+ DVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 285 LSG 287
L+G
Sbjct: 213 LTG 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEV 136
NF ++G+G FG V + E G + AVK LK + + ++E
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVECTMTEK 74
Query: 137 NYLG-QLHHPNLVKLIGFCLDGENRLL-VYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
L +HP L +L C +RL V E++ G L H+ + +R A
Sbjct: 75 RILSLARNHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAA 131
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
L FLH+ + +IYRD K N+LLD E + KL+DFG+ K G T + GT
Sbjct: 132 EIISALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGT 187
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y APE L D ++ GV+L E+L G
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 116 IAVKKLKPEGFQGHKEWLS---EVNYLGQLHHPNLVKLIGFCLDGENRL-------LVYE 165
+AVK L+ + + +L E L+HP +V + GE +V E
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT---GEAETPAGPLPYIVME 96
Query: 166 YMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE 225
Y+ +L + + G P+ I+V A + L+F H+ +I+RD K +NI++ +
Sbjct: 97 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISAT 152
Query: 226 FNAKLSDFGLAKA-GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLEL 284
K+ DFG+A+A +G+ + V+GT Y +PE + A+ DVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 285 LSG 287
L+G
Sbjct: 213 LTG 215
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPW------------TLR-- 189
N+V L+G C G +++ E+ G+L +L + +P+ TL
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 153 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPWTLR-------------- 189
N+V L+G C G +++ E+ G+L +L + +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 116 IAVKKLKPEGFQGHKEWLS---EVNYLGQLHHPNLVKLIGFCLDGENRL-------LVYE 165
+AVK L+ + + +L E L+HP +V + GE +V E
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT---GEAETPAGPLPYIVME 96
Query: 166 YMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE 225
Y+ +L + + G P+ I+V A + L+F H+ +I+RD K +NI++ +
Sbjct: 97 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISAT 152
Query: 226 FNAKLSDFGLAKA-GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLEL 284
K+ DFG+A+A +G+ + V+GT Y +PE + A+ DVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 285 LSG 287
L+G
Sbjct: 213 LTG 215
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 23/234 (9%)
Query: 66 LKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG 125
LKA +F + + IG G +G V A R G +A+KK+ P
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSS---------ARRRLTGQQVAIKKI-PNA 91
Query: 126 FQ---GHKEWLSEVNYLGQLHHPNLVKLIGFCLD----GENRLLVYEYMPKGSLENHLFR 178
F K L E+ L H N++ + GE + VY + + H
Sbjct: 92 FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS-VYVVLDLMESDLHQII 150
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
++PL RGL ++H A QVI+RD K SN+L++ K+ DFG+A+
Sbjct: 151 HSSQPLTLEHVRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMARG 208
Query: 239 GPT--GDRTHVSTQVMGTRGYAAPE-YLATGRLTAKCDVYSFGVVLLELLSGRR 289
T + + T+ + TR Y APE L+ T D++S G + E+L+ R+
Sbjct: 209 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 77 ATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL--- 133
AT + P + IG G +G VYK A P G +A+K ++ G L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYK---------ARDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 134 --SEVNYLGQLH---HPNLVKLIGFC----LDGENRL-LVYEYMPKGSLENHLFRRGARP 183
EV L +L HPN+V+L+ C D E ++ LV+E++ + L +L +
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG 116
Query: 184 LPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
LP + RGL FLH +++RD K NIL+ S KL+DFGLA+
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLAR---IYS 171
Query: 244 RTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
T V+ T Y APE L D++S G + E+
Sbjct: 172 YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPWTLR-------------- 189
N+V L+G C G +++ E+ G+L +L + +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG-HKEWLSEVNYLGQL-HH 144
+G G FG V I+ + +AVK LK H+ +SE+ L + HH
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 145 PNLVKLIGFCLD-GENRLLVYEYMPKGSLENHLFRRGARPLPWTLR-------------- 189
N+V L+G C G +++ E+ G+L +L + +P+ +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 188 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 23/234 (9%)
Query: 66 LKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEG 125
LKA +F + + IG G +G V A R G +A+KK+ P
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSS---------ARRRLTGQQVAIKKI-PNA 90
Query: 126 FQ---GHKEWLSEVNYLGQLHHPNLVKLIGFCLD----GENRLLVYEYMPKGSLENHLFR 178
F K L E+ L H N++ + GE + VY + + H
Sbjct: 91 FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS-VYVVLDLMESDLHQII 149
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
++PL RGL ++H A QVI+RD K SN+L++ K+ DFG+A+
Sbjct: 150 HSSQPLTLEHVRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMARG 207
Query: 239 GPT--GDRTHVSTQVMGTRGYAAPE-YLATGRLTAKCDVYSFGVVLLELLSGRR 289
T + + T+ + TR Y APE L+ T D++S G + E+L+ R+
Sbjct: 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVK---KLKPEGFQGHKEWLSEVNYLGQLH 143
+G+G FG VY A ++A+K K + E + EV L
Sbjct: 20 LGKGKFGNVYL---------ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
HPN+++L G+ D L+ EY P G++ L + T + A LS+
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYC 128
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYL 263
H ++VI+RD K N+LL S K++DFG + P+ R + GT Y PE +
Sbjct: 129 H--SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMI 182
Query: 264 ATGRLTAKCDVYSFGVVLLELLSG 287
K D++S GV+ E L G
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 116 IAVKKLKPEGFQGHKEWLS---EVNYLGQLHHPNLVKLIGFCLDGENRL-------LVYE 165
+AVK L+ + + +L E L+HP +V + GE +V E
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD---TGEAETPAGPLPYIVME 113
Query: 166 YMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE 225
Y+ +L + + G P+ I+V A + L+F H+ +I+RD K +NI++ +
Sbjct: 114 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISAT 169
Query: 226 FNAKLSDFGLAKA-GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLEL 284
K+ DFG+A+A +G+ + V+GT Y +PE + A+ DVYS G VL E+
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 229
Query: 285 LSG 287
L+G
Sbjct: 230 LTG 232
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 28/179 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGE----NRLLVYEYMPKGSLENHLFRRGARPLPWTLRI 190
EV L + H N+++ IG G + L+ + KGSL + L A + W
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELC 124
Query: 191 KVAIGAARGLSFLHEA--------EQQVIYRDFKASNILLDSEFNAKLSDFGLA---KAG 239
+A ARGL++LHE + + +RD K+ N+LL + A ++DFGLA +AG
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 240 PTGDRTHVSTQVMGTRGYAAPEYLATGRLT------AKCDVYSFGVVLLELLSGRRAVD 292
+ TH +GTR Y APE L G + + D+Y+ G+VL EL S A D
Sbjct: 185 KSAGDTHGQ---VGTRRYMAPEVL-EGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWL-SEVNYLGQLHH 144
IG G +G K R G ++ K+L + K+ L SEVN L +L H
Sbjct: 14 IGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 145 PNLVKLIGFCLDGENRLL--VYEYMPKGSLENHLFRRGARP---LPWTLRIKVAIGAARG 199
PN+V+ +D N L V EY G L + + +G + L ++V
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 200 LSFLH---EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
L H + V++RD K +N+ LD + N KL DFGLA+ T + +GT
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPY 181
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
Y +PE + K D++S G +L EL +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 93/217 (42%), Gaps = 27/217 (12%)
Query: 76 NATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSE 135
N R + D IG G F VYKG E T+E A + +KL Q KE E
Sbjct: 23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVA----WCELQDRKLTKSERQRFKE---E 75
Query: 136 VNYLGQLHHPNLVKLIGF---CLDGENRL-LVYEYMPKGSLENHLFRRGARPLP----WT 187
L L HPN+V+ + G+ + LV E G+L+ +L R + W
Sbjct: 76 AEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWC 135
Query: 188 LRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDS-EFNAKLSDFGLAKAGPTGDRTH 246
+I +GL FLH +I+RD K NI + + K+ D GLA T R
Sbjct: 136 RQI------LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRAS 185
Query: 247 VSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE 283
+ V+GT + APE + DVY+FG LE
Sbjct: 186 FAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLE 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 32/209 (15%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IGEG G V + G ++AVKK+ Q + +EV + H N
Sbjct: 159 IGEGSTGIVCIATVRSS---------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLF--RRGARPLPWTLRIKVAIGAARGLSFLH 204
+V++ L G+ +V E++ G+L + + R + V + + LS LH
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLH 264
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV------MGTRGYA 258
Q VI+RD K+ +ILL + KLSDFG VS +V +GT +
Sbjct: 265 A--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWM 314
Query: 259 APEYLATGRLTAKCDVYSFGVVLLELLSG 287
APE ++ + D++S G++++E++ G
Sbjct: 315 APELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWL-SEVNYLGQLHH 144
IG G +G K R G ++ K+L + K+ L SEVN L +L H
Sbjct: 14 IGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 145 PNLVKLIGFCLDGENRLL--VYEYMPKGSLENHLFRRGARP---LPWTLRIKVAIGAARG 199
PN+V+ +D N L V EY G L + + +G + L ++V
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 200 LSFLH---EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
L H + V++RD K +N+ LD + N KL DFGLA+ T + +GT
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPY 181
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
Y +PE + K D++S G +L EL +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE--- 131
K +F L+G+G FG V + G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 132 WLSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRI 190
++E L HP L L + +RL V EY G L HL +R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEER 106
Query: 191 KVAIGA--ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
GA L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 107 ARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GT Y APE L D + GVV+ E++ GR
Sbjct: 165 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 92/220 (41%), Gaps = 24/220 (10%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE--- 131
K +F L+G+G FG V + G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 132 WLSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRI 190
++E L HP L L + +RL V EY G L HL +R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEER 106
Query: 191 KVAIGA--ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
GA L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 107 ARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 162
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GT Y APE L D + GVV+ E++ GR
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE--- 131
K +F L+G+G FG V + G A+K L+ E E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 54
Query: 132 WLSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRI 190
++E L HP L L + +RL V EY G L HL +R +T
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEER 109
Query: 191 KVAIGA--ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
GA L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 110 ARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 167
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GT Y APE L D + GVV+ E++ GR
Sbjct: 168 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE--- 131
K +F L+G+G FG V + G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 132 WLSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRI 190
++E L HP L L + +RL V EY G L HL +R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEER 106
Query: 191 KVAIGA--ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
GA L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 107 ARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GT Y APE L D + GVV+ E++ GR
Sbjct: 165 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 92/220 (41%), Gaps = 24/220 (10%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE--- 131
K +F L+G+G FG V + G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 132 WLSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRI 190
++E L HP L L + +RL V EY G L HL +R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEER 106
Query: 191 KVAIGA--ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
GA L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 107 ARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 162
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GT Y APE L D + GVV+ E++ GR
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 78 TRNFRPDSL-----IGEGGFGYVYKGWIDE-HTLEAARPGVGMVIAVKKLKPEGFQGHKE 131
TR+F D +G+G FG VY + H + A + V+ +++ EG + +
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALK-----VLFKSQIEKEGVE--HQ 69
Query: 132 WLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
E+ LHHPN+++L + D L+ EY P+G L L + T I
Sbjct: 70 LRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIM 129
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+ A L + H ++VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 130 EELADA--LMYCH--GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR----KTM 181
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y PE + K D++ GV+ ELL G
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 92/220 (41%), Gaps = 24/220 (10%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE--- 131
K +F L+G+G FG V + G A+K L+ E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 132 WLSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRI 190
++E L HP L L + +RL V EY G L HL +R +T
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEER 106
Query: 191 KVAIGA--ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
GA L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 107 ARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 162
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GT Y APE L D + GVV+ E++ GR
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 92/220 (41%), Gaps = 24/220 (10%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE--- 131
K +F L+G+G FG V + G A+K L+ E E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAH 56
Query: 132 WLSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRI 190
++E L HP L L + +RL V EY G L HL +R +T
Sbjct: 57 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEER 111
Query: 191 KVAIGA--ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS 248
GA L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 112 ARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M 167
Query: 249 TQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
GT Y APE L D + GVV+ E++ GR
Sbjct: 168 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IGEG G V + G ++AVKK+ Q + +EV + H N
Sbjct: 39 IGEGSTGIVCIATVRSS---------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLF--RRGARPLPWTLRIKVAIGAARGLSFLH 204
+V++ L G+ +V E++ G+L + + R + V + + LS LH
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 144
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
Q VI+RD K+ +ILL + KLSDFG ++GT + APE ++
Sbjct: 145 A--QGVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAPELIS 200
Query: 265 TGRLTAKCDVYSFGVVLLELLSG 287
+ D++S G++++E++ G
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF-QGHKEWL-SEVNYLGQLHH 144
IG G +G K R G ++ K+L + K+ L SEVN L +L H
Sbjct: 14 IGTGSYGRCQK---------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 145 PNLVKLIGFCLDGENRLL--VYEYMPKGSLENHLFRRGARP---LPWTLRIKVAIGAARG 199
PN+V+ +D N L V EY G L + + +G + L ++V
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 200 LSFLH---EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
L H + V++RD K +N+ LD + N KL DFGLA+ + + +GT
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPY 181
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
Y +PE + K D++S G +L EL +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IGEG G V + G ++AVKK+ Q + +EV + H N
Sbjct: 37 IGEGSTGIVCIATVRSS---------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLF--RRGARPLPWTLRIKVAIGAARGLSFLH 204
+V++ L G+ +V E++ G+L + + R + V + + LS LH
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 142
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
Q VI+RD K+ +ILL + KLSDFG ++GT + APE ++
Sbjct: 143 A--QGVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAPELIS 198
Query: 265 TGRLTAKCDVYSFGVVLLELLSG 287
+ D++S G++++E++ G
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 44/233 (18%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNY- 138
N + LIG G +G VYKG +DE RP +AVK F + +++E N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVF---SFANRQNFINEKNIY 59
Query: 139 -LGQLHHPNLVKLI----GFCLDGE-NRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
+ + H N+ + I DG LLV EY P GSL +L W ++
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRL 116
Query: 193 AIGAARGLSFLHEA-------EQQVIYRDFKASNILLDSEFNAKLSDFGLA------KAG 239
A RGL++LH + + +RD + N+L+ ++ +SDFGL+ +
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 240 PTGDRTHVSTQVMGTRGYAAPEYLATG-------RLTAKCDVYSFGVVLLELL 285
G+ + + +GT Y APE L + D+Y+ G++ E+
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + M +A+K K +E +L E + Q HP
Sbjct: 18 IGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG + EN + ++ E G L + L R L I A + L++L
Sbjct: 72 HIVKLIG--VITENPVWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLE 128
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++ ++RD A N+L+ S KL DFGL++ S + + + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK-WMAPESIN 185
Query: 265 TGRLTAKCDVYSFGVVLLELL 285
R T+ DV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 42/228 (18%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE---WLSEVNYLGQLH 143
+G+G +G V+K ID T G V+AVKK+ + FQ + E+ L +L
Sbjct: 17 LGKGAYGIVWKS-IDRRT--------GEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 144 -HPNLVKLIGFCLDGENR--LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
H N+V L+ +R LV++YM + H R A L + V + +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYMET---DLHAVIR-ANILEPVHKQYVVYQLIKVI 122
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT------------------- 241
+LH +++RD K SNILL++E + K++DFGL+++
Sbjct: 123 KYLHSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 242 GDRTHVSTQVMGTRGYAAPEY-LATGRLTAKCDVYSFGVVLLELLSGR 288
D + T + TR Y APE L + + T D++S G +L E+L G+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 13/184 (7%)
Query: 112 VGMVIAVKKLKPEGF-QGHKEWLSEVNYLGQLHH-PNLVKLIGFCLDGENRLLVYEYMPK 169
G VIAVK+++ G + +K L +++ + + H P +V+ G + + + E M
Sbjct: 49 TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-- 106
Query: 170 GSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAK 229
G+ L +R P+P + K+ + + L +L E + VI+RD K SNILLD K
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE-KHGVIHRDVKPSNILLDERGQIK 165
Query: 230 LSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYL-----ATGRLTAKCDVYSFGVVLLEL 284
L DFG+ +G D + G Y APE + + DV+S G+ L+EL
Sbjct: 166 LCDFGI--SGRLVD-DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
Query: 285 LSGR 288
+G+
Sbjct: 223 ATGQ 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IGEG G V + G ++AVKK+ Q + +EV + H N
Sbjct: 28 IGEGSTGIVCIATVRSS---------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLF--RRGARPLPWTLRIKVAIGAARGLSFLH 204
+V++ L G+ +V E++ G+L + + R + V + + LS LH
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 133
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
Q VI+RD K+ +ILL + KLSDFG ++GT + APE ++
Sbjct: 134 A--QGVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAPELIS 189
Query: 265 TGRLTAKCDVYSFGVVLLELLSG 287
+ D++S G++++E++ G
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSEVNYLGQL 142
IGEG +G VYK A+ G A+KK++ EG + E++ L +L
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
H N+VKL + +LV+E++ + L L + G+++
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
H+ ++V++RD K N+L++ E K++DFGLA+A R + T + T Y AP+
Sbjct: 116 CHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDV 171
Query: 263 L-ATGRLTAKCDVYSFGVVLLELLSG 287
L + + + D++S G + E+++G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 28/207 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IGEG G V + G ++AVKK+ Q + +EV + H N
Sbjct: 82 IGEGSTGIVCIATVRSS---------GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
+V++ L G+ +V E++ G+L + + V + + LS LH
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHA- 188
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV------MGTRGYAAP 260
Q VI+RD K+ +ILL + KLSDFG VS +V +GT + AP
Sbjct: 189 -QGVIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAP 239
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSG 287
E ++ + D++S G++++E++ G
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IGEG G V + R G ++AVKK+ Q + +EV + H N
Sbjct: 32 IGEGSTGIV--------CIATVRSS-GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLF--RRGARPLPWTLRIKVAIGAARGLSFLH 204
+V++ L G+ +V E++ G+L + + R + V + + LS LH
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 137
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
Q VI+RD K+ +ILL + KLSDFG ++GT + APE ++
Sbjct: 138 A--QGVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGTPYWMAPELIS 193
Query: 265 TGRLTAKCDVYSFGVVLLELLSG 287
+ D++S G++++E++ G
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 28/236 (11%)
Query: 65 NLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE 124
+L S L++ F L+G G +G VYKG H G + A+K +
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG---RHV------KTGQLAAIKVMDVT 60
Query: 125 GFQGHKEWLSEVNYLGQL-HHPNLVKLIGFCLD------GENRLLVYEYMPKGSLENHLF 177
G + +E E+N L + HH N+ G + + LV E+ GS+ + +
Sbjct: 61 GDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK 119
Query: 178 RRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGL-A 236
L + RGLS LH+ +VI+RD K N+LL KL DFG+ A
Sbjct: 120 NTKGNTLKEEWIAYICREILRGLSHLHQ--HKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177
Query: 237 KAGPTGDRTHVSTQVMGTRGYAAPEYLAT-----GRLTAKCDVYSFGVVLLELLSG 287
+ T R + +GT + APE +A K D++S G+ +E+ G
Sbjct: 178 QLDRTVGRRNT---FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQGHKEWLS-EVNYLGQLH 143
+G+GGF Y+ D T E G V+ L KP KE +S E+ L
Sbjct: 49 FLGKGGFAKCYE-ITDMDTKEVF---AGKVVPKSMLLKPH----QKEKMSTEIAIHKSLD 100
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGL 200
+P++V GF D + +V E + SL RR A P + +R + +G+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 155
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAA 259
+LH +VI+RD K N+ L+ + + K+ DFGLA K G+R + GT Y A
Sbjct: 156 QYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIA 210
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGR 288
PE L + + D++S G +L LL G+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSEVNYLGQL 142
IGEG +G VYK A+ G A+KK++ EG + E++ L +L
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
H N+VKL + +LV+E++ + L L + G+++
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
H+ ++V++RD K N+L++ E K++DFGLA+A R + T + T Y AP+
Sbjct: 116 CHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDV 171
Query: 263 L-ATGRLTAKCDVYSFGVVLLELLSG 287
L + + + D++S G + E+++G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSEVNYLGQL 142
IGEG +G VYK A+ G A+KK++ EG + E++ L +L
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
H N+VKL + +LV+E++ + L L + G+++
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
H+ ++V++RD K N+L++ E K++DFGLA+A R + T + T Y AP+
Sbjct: 116 CHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDV 171
Query: 263 L-ATGRLTAKCDVYSFGVVLLELLSG 287
L + + + D++S G + E+++G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQGHKEWLS-EVNYLGQLH 143
+G+GGF Y+ D T E G V+ L KP KE +S E+ L
Sbjct: 49 FLGKGGFAKCYE-ITDMDTKEVF---AGKVVPKSMLLKPH----QKEKMSTEIAIHKSLD 100
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGL 200
+P++V GF D + +V E + SL RR A P + +R + +G+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 155
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAA 259
+LH +VI+RD K N+ L+ + + K+ DFGLA K G+R + GT Y A
Sbjct: 156 QYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIA 210
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGR 288
PE L + + D++S G +L LL G+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQGHKEWLS-EVNYLGQLH 143
+G+GGF Y+ D T E G V+ L KP KE +S E+ L
Sbjct: 49 FLGKGGFAKCYE-ITDMDTKEVF---AGKVVPKSMLLKPH----QKEKMSTEIAIHKSLD 100
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGL 200
+P++V GF D + +V E + SL RR A P + +R + +G+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 155
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAA 259
+LH +VI+RD K N+ L+ + + K+ DFGLA K G+R + GT Y A
Sbjct: 156 QYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKTLCGTPNYIA 210
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGR 288
PE L + + D++S G +L LL G+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + M +A+K K +E +L E + Q HP
Sbjct: 18 IGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG + EN + ++ E G L + L R L I A + L++L
Sbjct: 72 HIVKLIG--VITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE 128
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++ ++RD A N+L+ S KL DFGL++ S + + + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESIN 185
Query: 265 TGRLTAKCDVYSFGVVLLELL 285
R T+ DV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQGHKEWLS-EVNYLGQLH 143
+G+GGF Y+ D T E G V+ L KP KE +S E+ L
Sbjct: 33 FLGKGGFAKCYE-ITDMDTKEVF---AGKVVPKSMLLKPH----QKEKMSTEIAIHKSLD 84
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGL 200
+P++V GF D + +V E + SL RR A P + +R + +G+
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 139
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAA 259
+LH +VI+RD K N+ L+ + + K+ DFGLA K G+R + GT Y A
Sbjct: 140 QYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIA 194
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSGR 288
PE L + + D++S G +L LL G+
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EYMP G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + K++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EYMP G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + K++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 43/227 (18%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQ--LH 143
+G+G +G V++G W H G +AVK Q W E L
Sbjct: 16 VGKGRYGEVWRGLW---H---------GESVAVKIFSSRDEQS---WFRETEIYNTVLLR 60
Query: 144 HPNLVKLIGFCLDGENR----LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
H N++ I + N L+ Y GSL + L R+ P L +++A+ AA G
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAACG 117
Query: 200 LSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG-DRTHVSTQ-V 251
L+ LH + + + +RDFK+ N+L+ S ++D GLA G D +
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 252 MGTRGYAAPEYLATGRLTAKC-------DVYSFGVVLLELLSGRRAV 291
+GT+ Y APE L ++ C D+++FG+VL E+ RR +
Sbjct: 178 VGTKRYMAPEVLDE-QIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG VY ++ A V+ +L+ EG + + E+ L HPN
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALK----VLFKSQLEKEGVE--HQLRREIEIQSHLRHPN 76
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
++++ + D + L+ E+ P+G L L + G + + A L + H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA--LHYCH-- 132
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
E++VI+RD K N+L+ + K++DFG + P+ R + GT Y PE +
Sbjct: 133 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGK 188
Query: 267 RLTAKCDVYSFGVVLLELLSG 287
K D++ GV+ E L G
Sbjct: 189 THDEKVDLWCAGVLCYEFLVG 209
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
E+ + L HP LV L D E+ +V + + G L HL ++ T+++ +
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVKLFI 121
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
L +L Q++I+RD K NILLD + ++DF +A P T ++T +
Sbjct: 122 C-ELVMALDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MA 175
Query: 253 GTRGYAAPEYLATGR---LTAKCDVYSFGVVLLELLSGRR 289
GT+ Y APE ++ + + D +S GV ELL GRR
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG VY ++ A V+ +L+ EG + + E+ L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALK----VLFKSQLEKEGVE--HQLRREIEIQSHLRHPN 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
++++ + D + L+ E+ P+G L L + G + + A L + H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA--LHYCH-- 131
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
E++VI+RD K N+L+ + K++DFG + P+ R + GT Y PE +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGK 187
Query: 267 RLTAKCDVYSFGVVLLELLSG 287
K D++ GV+ E L G
Sbjct: 188 THDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G FG VY ++ A V+ +L+ EG + + E+ L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALK----VLFKSQLEKEGVE--HQLRREIEIQSHLRHPN 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
++++ + D + L+ E+ P+G L L + G + + A L + H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA--LHYCH-- 131
Query: 207 EQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATG 266
E++VI+RD K N+L+ + K++DFG + P+ R + GT Y PE +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGK 187
Query: 267 RLTAKCDVYSFGVVLLELLSG 287
K D++ GV+ E L G
Sbjct: 188 THDEKVDLWCAGVLCYEFLVG 208
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 115 VIAVKKLKPEGFQGHKEWL-SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLE 173
++A+K + E +G + + +E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 174 NHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL---LDSEFNAKL 230
+ + +G R+ + A + +LH+ +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 231 SDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
SDFGL+K G V + GT GY APE LA + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + M +A+K K +E +L E + Q HP
Sbjct: 398 IGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG EN + ++ E G L + L R L I A + L++L
Sbjct: 452 HIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLE 508
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG-----YAA 259
++ ++RD A N+L+ S KL DFGL++ ST ++G + A
Sbjct: 509 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMA 560
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELL 285
PE + R T+ DV+ FGV + E+L
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 115 VIAVKKLKPEGFQGHKEWL-SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLE 173
++A+K + E +G + + +E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 174 NHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL---LDSEFNAKL 230
+ + +G R+ + A + +LH+ +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 231 SDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
SDFGL+K G V + GT GY APE LA + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHK-EWLSEVNYLGQLHHP 145
+GEG + VYKG ++A+K+++ E +G + EV+ L L H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
N+V L ++ LV+EY+ K L+ +L G +++ RGL++ H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKL-FLFQLLRGLAYCHR 118
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE-YLA 264
Q+V++RD K N+L++ KL+DFGLA+A +T+ + V T Y P+ L
Sbjct: 119 --QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLG 174
Query: 265 TGRLTAKCDVYSFGVVLLELLSGR 288
+ + + D++ G + E+ +GR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 115 VIAVKKLKPEGFQGHKEWL-SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLE 173
++A+K + E +G + + +E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 174 NHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL---LDSEFNAKL 230
+ + +G R+ + A + +LH+ +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 231 SDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
SDFGL+K G V + GT GY APE LA + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IGEG FG K + + T E R V I + ++ + +E EV L + HPN
Sbjct: 32 IGEGSFG---KAILVKST-EDGRQYVIKEINISRMSS---KEREESRREVAVLANMKHPN 84
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSL------ENHLFRRGARPLPWTLRIKVAIGAARGL 200
+V+ + + +V +Y G L + + + + L W ++I +A+
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK----- 139
Query: 201 SFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
H ++++++RD K+ NI L + +L DFG+A+ ++ +GT Y +P
Sbjct: 140 ---HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSP 194
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLV 303
E K D+++ G VL EL + + A + G+ +NLV
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFE---AGSMKNLV 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + + +A+K K +E +L E + Q HP
Sbjct: 46 IGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG + EN + ++ E G L + L R L I A + L++L
Sbjct: 100 HIVKLIG--VITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE 156
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++ ++RD A N+L+ S KL DFGL++ S + + + APE +
Sbjct: 157 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESIN 213
Query: 265 TGRLTAKCDVYSFGVVLLELL 285
R T+ DV+ FGV + E+L
Sbjct: 214 FRRFTSASDVWMFGVCMWEIL 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + + +A+K K +E +L E + Q HP
Sbjct: 18 IGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG + EN + ++ E G L + L R L I A + L++L
Sbjct: 72 HIVKLIG--VITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE 128
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++ ++RD A N+L+ S KL DFGL++ S + + + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESIN 185
Query: 265 TGRLTAKCDVYSFGVVLLELL 285
R T+ DV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVN 137
N+ P ++G G V + I + T + + V E Q +E L EV+
Sbjct: 4 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 138 YLGQLH-HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGA 196
L ++ HPN+++L LV++ M KG L ++L + T +I A+
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 122
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
+ LH+ +++RD K NILLD + N KL+DFG + G++ +V GT
Sbjct: 123 V--ICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPS 175
Query: 257 YAAPEYLATGR------LTAKCDVYSFGVVLLELLSG 287
Y APE + + D++S GV++ LL+G
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + + +A+K K +E +L E + Q HP
Sbjct: 20 IGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG + EN + ++ E G L + L R L I A + L++L
Sbjct: 74 HIVKLIG--VITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE 130
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++ ++RD A N+L+ S KL DFGL++ S + + + APE +
Sbjct: 131 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESIN 187
Query: 265 TGRLTAKCDVYSFGVVLLELL 285
R T+ DV+ FGV + E+L
Sbjct: 188 FRRFTSASDVWMFGVCMWEIL 208
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + M +A+K K +E +L E + Q HP
Sbjct: 18 IGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG + EN + ++ E G L + L R L I A + L++L
Sbjct: 72 HIVKLIG--VITENPVWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLE 128
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++ ++RD A N+L+ + KL DFGL++ S + + + APE +
Sbjct: 129 S--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESIN 185
Query: 265 TGRLTAKCDVYSFGVVLLELL 285
R T+ DV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + + +A+K K +E +L E + Q HP
Sbjct: 15 IGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG + EN + ++ E G L + L R L I A + L++L
Sbjct: 69 HIVKLIG--VITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE 125
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++ ++RD A N+L+ S KL DFGL++ S + + + APE +
Sbjct: 126 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESIN 182
Query: 265 TGRLTAKCDVYSFGVVLLELL 285
R T+ DV+ FGV + E+L
Sbjct: 183 FRRFTSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + + +A+K K +E +L E + Q HP
Sbjct: 23 IGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG + EN + ++ E G L + L R L I A + L++L
Sbjct: 77 HIVKLIG--VITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE 133
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++ ++RD A N+L+ S KL DFGL++ S + + + APE +
Sbjct: 134 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESIN 190
Query: 265 TGRLTAKCDVYSFGVVLLELL 285
R T+ DV+ FGV + E+L
Sbjct: 191 FRRFTSASDVWMFGVCMWEIL 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVN 137
N+ P ++G G V + I + T + + V E Q +E L EV+
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 138 YLGQLH-HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGA 196
L ++ HPN+++L LV++ M KG L ++L + T +I A+
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
+ LH+ +++RD K NILLD + N KL+DFG + G++ +V GT
Sbjct: 136 V--ICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPS 188
Query: 257 YAAPEYLATGR------LTAKCDVYSFGVVLLELLSG 287
Y APE + + D++S GV++ LL+G
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + + +A+K K +E +L E + Q HP
Sbjct: 21 IGEGQFGDVHQG------IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG + EN + ++ E G L + L R L I A + L++L
Sbjct: 75 HIVKLIG--VITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE 131
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
++ ++RD A N+L+ S KL DFGL++ S + + + APE +
Sbjct: 132 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESIN 188
Query: 265 TGRLTAKCDVYSFGVVLLELL 285
R T+ DV+ FGV + E+L
Sbjct: 189 FRRFTSASDVWMFGVCMWEIL 209
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVNYLGQLHHP 145
IGEG FG V++G + + M +A+K K +E +L E + Q HP
Sbjct: 398 IGEGQFGDVHQG------IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 146 NLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
++VKLIG EN + ++ E G L + L R L I A + L++L
Sbjct: 452 HIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLE 508
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG-----YAA 259
++ ++RD A N+L+ + KL DFGL++ ST ++G + A
Sbjct: 509 S--KRFVHRDIAARNVLVSATDCVKLGDFGLSRY------MEDSTYYKASKGKLPIKWMA 560
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELL 285
PE + R T+ DV+ FGV + E+L
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 18/215 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVNYLGQLHHP 145
IG GGF V A G ++A+K + + +E+ L L H
Sbjct: 18 IGTGGFAKVKL---------ACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
++ +L +V EY P G L +++ + T + I +A ++++H
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSA--VAYVHS 126
Query: 206 AEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLAT 265
Q +RD K N+L D KL DFGL A P G++ + G+ YAAPE L
Sbjct: 127 --QGYAHRDLKPENLLFDEYHKLKLIDFGLC-AKPKGNKDYHLQTCCGSLAYAAPE-LIQ 182
Query: 266 GR--LTAKCDVYSFGVVLLELLSGRRAVDKTRVGA 298
G+ L ++ DV+S G++L L+ G D V A
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + K++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + K++DFGLAK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS-EVNYLGQLHH 144
+G+GGF ++ I + + G +V LKP +E +S E++ L H
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAG-KIVPKSLLLKPH----QREKMSMEISIHRSLAH 98
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGLS 201
++V GF D + +V E + SL RR A P + LR V G
Sbjct: 99 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL-----GCQ 153
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAAP 260
+LH +VI+RD K N+ L+ + K+ DFGLA K G+R V + GT Y AP
Sbjct: 154 YLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAP 208
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGR 288
E L+ + + DV+S G ++ LL G+
Sbjct: 209 EVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + +VY +Y+P+ + H + R + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 115 VIAVKKLKPEGFQGHKEWL-SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLE 173
++A+K + + +G + + +E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 174 NHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL---LDSEFNAKL 230
+ + +G R+ + A + +LH+ +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 231 SDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
SDFGL+K G V + GT GY APE LA + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS-EVNYLGQLHH 144
+G+GGF ++ I + + G +V LKP +E +S E++ L H
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAG-KIVPKSLLLKPH----QREKMSMEISIHRSLAH 100
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGLS 201
++V GF D + +V E + SL RR A P + LR V G
Sbjct: 101 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL-----GCQ 155
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAAP 260
+LH +VI+RD K N+ L+ + K+ DFGLA K G+R V + GT Y AP
Sbjct: 156 YLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAP 210
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGR 288
E L+ + + DV+S G ++ LL G+
Sbjct: 211 EVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
F+ + + G+G FG V G GM +A+KK+ + ++E L + L
Sbjct: 25 FQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 141 QLHHPNLVKLIG--FCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIK 191
LHHPN+V+L + L +R +Y EY+P + +RR P P +++
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV- 133
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILL-DSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
R + LH V +RD K N+L+ +++ KL DFG AK + +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP---NVA 190
Query: 251 VMGTRGYAAPEYL-ATGRLTAKCDVYSFGVVLLELLSG 287
+ +R Y APE + T D++S G + E++ G
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 79 RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKE-WLSEVN 137
N+ P ++G G V + I + T + + V E Q +E L EV+
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 138 YLGQLH-HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGA 196
L ++ HPN+++L LV++ M KG L ++L + T +I A+
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
+ LH+ +++RD K NILLD + N KL+DFG + G++ V GT
Sbjct: 136 V--ICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTPS 188
Query: 257 YAAPEYLATGR------LTAKCDVYSFGVVLLELLSG 287
Y APE + + D++S GV++ LL+G
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 47/236 (19%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGV-GMVIAVKKLKPEGFQGHKEWLSEVNY 138
+F +++G+G FG V K AR + A+KK++ + LSEV
Sbjct: 7 DFEEIAVLGQGAFGQVVK----------ARNALDSRYYAIKKIRHTE-EKLSTILSEVML 55
Query: 139 LGQLHHPNLVKLIGFCLDGEN-------------RLLVYEYMPKGSLENHLFRRG---AR 182
L L+H +V+ L+ N + EY G+L + + R
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPT 241
W L ++ LS++H Q +I+RD K NI +D N K+ DFGLAK +
Sbjct: 116 DEYWRLFRQIL----EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 242 GDRTHVSTQ-----------VMGTRGYAAPEYL-ATGRLTAKCDVYSFGVVLLELL 285
D + +Q +GT Y A E L TG K D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPW----TLR 189
E + + + P +V+L D + +V EYMP G L N L P W T
Sbjct: 124 EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAE 182
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
+ +A+ A + +H RD K N+LLD + KL+DFG H T
Sbjct: 183 VVLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT 234
Query: 250 QVMGTRGYAAPEYLAT----GRLTAKCDVYSFGVVLLELLSG 287
V GT Y +PE L + G +CD +S GV L E+L G
Sbjct: 235 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
++G GGFG V+ + + + K +G+QG + E L ++H
Sbjct: 192 VLGRGGFGEVFAC---QMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSR 245
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR--------RGARPLPWTLRIKVAIGAA 197
+V L + LV M G + H++ + R + +T +I
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------V 299
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA---KAGPTGDRTHVSTQVMGT 254
GL LH+ + +IYRD K N+LLD + N ++SD GLA KAG T + + GT
Sbjct: 300 SGLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GT 352
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
G+ APE L D ++ GV L E+++ R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
++G GGFG V+ + + + K +G+QG + E L ++H
Sbjct: 192 VLGRGGFGEVFAC---QMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSR 245
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR--------RGARPLPWTLRIKVAIGAA 197
+V L + LV M G + H++ + R + +T +I
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------V 299
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA---KAGPTGDRTHVSTQVMGT 254
GL LH+ + +IYRD K N+LLD + N ++SD GLA KAG T + + GT
Sbjct: 300 SGLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GT 352
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
G+ APE L D ++ GV L E+++ R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 187
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWTL 199
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
++G G FG V+K G+ +A K +K G + +E +E++ + QL H
Sbjct: 96 ILGGGRFGQVHK---------CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGAR--PLPWTLRIKVAIGAARGLSFL 203
NL++L + +LV EY+ G L + + L L +K R
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIR----- 201
Query: 204 HEAEQQVIYRDFKASNILL---DSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
H + +++ D K NIL D++ K+ DFGLA+ ++ V+ GT + AP
Sbjct: 202 HMHQMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN---FGTPEFLAP 257
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSG 287
E + ++ D++S GV+ LLSG
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
++G GGFG V+ + + + K +G+QG + E L ++H
Sbjct: 192 VLGRGGFGEVFAC---QMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSR 245
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR--------RGARPLPWTLRIKVAIGAA 197
+V L + LV M G + H++ + R + +T +I
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------V 299
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA---KAGPTGDRTHVSTQVMGT 254
GL LH+ + +IYRD K N+LLD + N ++SD GLA KAG T + + GT
Sbjct: 300 SGLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GT 352
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
G+ APE L D ++ GV L E+++ R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 187
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
++G GGFG V+ + + + K +G+QG + E L ++H
Sbjct: 192 VLGRGGFGEVFAC---QMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSR 245
Query: 146 NLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR--------RGARPLPWTLRIKVAIGAA 197
+V L + LV M G + H++ + R + +T +I
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------V 299
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA---KAGPTGDRTHVSTQVMGT 254
GL LH+ + +IYRD K N+LLD + N ++SD GLA KAG T + + GT
Sbjct: 300 SGLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GT 352
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGR 288
G+ APE L D ++ GV L E+++ R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLV-YEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
E + + +L HP VKL FC + +L Y G L ++ + G+ T
Sbjct: 87 ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
I +A L +LH + +I+RD K NILL+ + + +++DFG AK + + +G
Sbjct: 146 IVSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
T Y +PE L D+++ G ++ +L++G
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 166
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 167 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 221
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 55 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 160
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 161 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 215
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 170 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 220
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 141
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 142 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 192
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 166
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 167 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 221
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 134
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 135 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWTL 184
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS-EVNYLGQLHH 144
+G+GGF ++ I + + G +V LKP +E +S E++ L H
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAG-KIVPKSLLLKPH----QREKMSMEISIHRSLAH 74
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGLS 201
++V GF D + +V E + SL RR A P + LR V G
Sbjct: 75 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL-----GCQ 129
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAAP 260
+LH +VI+RD K N+ L+ + K+ DFGLA K G+R V + GT Y AP
Sbjct: 130 YLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAP 184
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGR 288
E L+ + + DV+S G ++ LL G+
Sbjct: 185 EVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 63 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 168
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 169 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 223
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 122/287 (42%), Gaps = 49/287 (17%)
Query: 17 HATSGDTKLPDKNGNFSMASSLKTNKSEKR-PSGNFSMPRTECD--ILSCPNLKAFTFS- 72
HA G + S+A + S R PS P+TE + +L LK +
Sbjct: 34 HALQGSVSSGQAHSLTSLAKTWAARGSRSREPS-----PKTEDNEGVLLTEKLKPVDYEY 88
Query: 73 --ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHK 130
E+ AT R +G G FG V H +E + G AVKK++ E F+
Sbjct: 89 REEVHWATHQLR----LGRGSFGEV-------HRMEDKQ--TGFQCAVKKVRLEVFRA-- 133
Query: 131 EWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRI 190
E+ L P +V L G +G + E + GSL + +G LP +
Sbjct: 134 ---EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRAL 188
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE-FNAKLSDFG---------LAKAGP 240
A GL +LH +++++ D KA N+LL S+ +A L DFG L K+
Sbjct: 189 YYLGQALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 241 TGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
TGD + GT + APE + AK DV+S ++L +L+G
Sbjct: 247 TGD------YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 141
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 142 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 192
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 35 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 81
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 140
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 141 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 195
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 46 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 92
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 151
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 152 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 206
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 65 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 170
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 171 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 225
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ QG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P + H + R + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 40 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 86
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 145
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 146 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 200
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + K++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 106 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 211
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 212 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 266
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI 141
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L + D+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 32 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 137
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 138 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 192
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + +++DFGLAK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + K++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 144
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 145 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 199
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 144
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 145 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 199
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 10/213 (4%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS 134
K +F+ ++GEG F V + L +R ++ + + E +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPY--VTR 59
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 119
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 120 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + K++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 10/213 (4%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS 134
K +F+ ++GEG F V + L +R ++ + + E +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPY--VTR 58
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 118
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 119 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS-EVNYLGQLHH 144
+G+GGF ++ I + + G +V LKP +E +S E++ L H
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAG-KIVPKSLLLKPH----QREKMSMEISIHRSLAH 80
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGLS 201
++V GF D + +V E + SL RR A P + LR V G
Sbjct: 81 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL-----GCQ 135
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAAP 260
+LH +VI+RD K N+ L+ + K+ DFGLA K G+R + GT Y AP
Sbjct: 136 YLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNYIAP 190
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGR 288
E L+ + + DV+S G ++ LL G+
Sbjct: 191 EVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 119/281 (42%), Gaps = 37/281 (13%)
Query: 17 HATSGDTKLPDKNGNFSMASSLKTNKSEKR-PSGNFSMPRTECD--ILSCPNLKAFTFS- 72
HA G + S+A + S R PS P+TE + +L LK +
Sbjct: 15 HALQGSVSSGQAHSLTSLAKTWAARGSRSREPS-----PKTEDNEGVLLTEKLKPVDYEY 69
Query: 73 --ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHK 130
E+ AT R +G G FG V H +E + G AVKK++ E F+
Sbjct: 70 REEVHWATHQLR----LGRGSFGEV-------HRMEDKQ--TGFQCAVKKVRLEVFRA-- 114
Query: 131 EWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRI 190
E+ L P +V L G +G + E + GSL + +G LP +
Sbjct: 115 ---EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRAL 169
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSE-FNAKLSDFGLA---KAGPTGDRTH 246
A GL +LH +++++ D KA N+LL S+ +A L DFG A + G
Sbjct: 170 YYLGQALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLL 227
Query: 247 VSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ GT + APE + AK DV+S ++L +L+G
Sbjct: 228 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 28 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 74
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 133
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 134 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 188
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS-EVNYLGQLHH 144
+G+GGF ++ I + + G +V LKP +E +S E++ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAG-KIVPKSLLLKPH----QREKMSMEISIHRSLAH 76
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGLS 201
++V GF D + +V E + SL RR A P + LR V G
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL-----GCQ 131
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAAP 260
+LH +VI+RD K N+ L+ + K+ DFGLA K G+R + GT Y AP
Sbjct: 132 YLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNYIAP 186
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGR 288
E L+ + + DV+S G ++ LL G+
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHKEWLSEVNY 138
+F P +G GGFG V+ EA A+K+++ P ++ + EV
Sbjct: 6 DFEPIQCLGRGGFGVVF---------EAKNKVDDCNYAIKRIRLPNRELAREKVMREVKA 56
Query: 139 LGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHL-FRRGARPLPW----------- 186
L +L HP +V+ L+ + PK L + R W
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 187 -TLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRT 245
++ + + + A + FLH + +++RD K SNI + K+ DFGL A +
Sbjct: 117 RSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 246 HV----------STQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL 285
T +GT+ Y +PE + + K D++S G++L ELL
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRY 187
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS-EVNYLGQLHH 144
+G+GGF ++ I + + G +V LKP +E +S E++ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAG-KIVPKSLLLKPH----QREKMSMEISIHRSLAH 76
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP---WTLRIKVAIGAARGLS 201
++V GF D + +V E + SL RR A P + LR V G
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL-----GCQ 131
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVSTQVMGTRGYAAP 260
+LH +VI+RD K N+ L+ + K+ DFGLA K G+R + GT Y AP
Sbjct: 132 YLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNYIAP 186
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGR 288
E L+ + + DV+S G ++ LL G+
Sbjct: 187 EVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 143 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 132
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 133 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG VY+ + + G ++A+KK+ Q + E+ + +L H
Sbjct: 31 VIGNGSFGVVYQAKLCDS---------GELVAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 146 NLVKL-IGFCLDGENRLLVY-----EYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAA 197
N+V+L F GE + VY +Y+P+ + H + R + LP
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLF 136
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
R L+++H + +RD K N+LLD + KL DFG AK G+ + + +R
Sbjct: 137 RSLAYIHSF--GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 191
Query: 257 YAAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
Y APE + T+ DV+S G VL ELL G+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IGEG G V ++H+ G +AVK + Q + +EV + H N
Sbjct: 53 IGEGSTGIVCLAR-EKHS--------GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHL--FRRGARPLPWTLRIKVAIGAARGLSFLH 204
+V++ L GE ++ E++ G+L + + R + V + L++LH
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLH 158
Query: 205 EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
Q VI+RD K+ +ILL + KLSDFG A + D ++GT + APE ++
Sbjct: 159 A--QGVIHRDIKSDSILLTLDGRVKLSDFGFC-AQISKDVPK-RKXLVGTPYWMAPEVIS 214
Query: 265 TGRLTAKCDVYSFGVVLLELLSG 287
+ D++S G++++E++ G
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
R ++ EGGF +VY EA G G A+K+L + ++ + EV ++
Sbjct: 30 LRVRRVLAEGGFAFVY---------EAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80
Query: 141 QLH-HPNLVKLIGFCL----------DGENRLLVYEYMPKGSLENHLFRRGAR-PLPWTL 188
+L HPN+V+ FC G+ L+ + KG L L + +R PL
Sbjct: 81 KLSGHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDT 137
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLA 236
+K+ R + +H + +I+RD K N+LL ++ KL DFG A
Sbjct: 138 VLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 10/213 (4%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS 134
K +F+ ++GEG F V + L +R ++ + + E +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPY--VTR 56
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 116
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 117 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 143 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 117
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 118 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 140 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 140 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 140 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 144
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 145 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 140 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 22/216 (10%)
Query: 76 NATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSE 135
N + F ++G G F V+ + G + A+K +K +E
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFL---------VKQRLTGKLFALKCIKKSPAFRDSSLENE 56
Query: 136 VNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA-RPLPWTLRIKVAI 194
+ L ++ H N+V L + LV + + G L + + RG +L I+ +
Sbjct: 57 IAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVL 116
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNIL-LDSEFNAKL--SDFGLAKAGPTGDRTHVSTQV 251
A + +LHE +++RD K N+L L E N+K+ +DFGL+K G + +
Sbjct: 117 SAVK---YLHE--NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTA 167
Query: 252 MGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT GY APE LA + D +S GV+ LL G
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 71 FSELKNATRN-------FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP 123
F + KN N F +IG GGFG VY + G + A+K L
Sbjct: 174 FCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYG---------CRKADTGKMYAMKCLDK 224
Query: 124 EGF---QGHKEWLSEVNYLGQLHHPN--LVKLIGFCLDGENRL-LVYEYMPKGSLENHLF 177
+ QG L+E L + + + + + ++L + + M G L HL
Sbjct: 225 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 284
Query: 178 RRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK 237
+ G +R A GL +H + V+YRD K +NILLD + ++SD GLA
Sbjct: 285 QHGVFS-EADMRFYAA-EIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA- 339
Query: 238 AGPTGDRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSG 287
+ + H S +GT GY APE L G + D +S G +L +LL G
Sbjct: 340 CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 71 FSELKNATRN-------FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP 123
F + KN N F +IG GGFG VY + G + A+K L
Sbjct: 174 FCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYG---------CRKADTGKMYAMKCLDK 224
Query: 124 EGF---QGHKEWLSEVNYLGQLHHPN--LVKLIGFCLDGENRL-LVYEYMPKGSLENHLF 177
+ QG L+E L + + + + + ++L + + M G L HL
Sbjct: 225 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 284
Query: 178 RRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK 237
+ G +R A GL +H + V+YRD K +NILLD + ++SD GLA
Sbjct: 285 QHGVFS-EADMRFYAA-EIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA- 339
Query: 238 AGPTGDRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSG 287
+ + H S +GT GY APE L G + D +S G +L +LL G
Sbjct: 340 CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 71 FSELKNATRN-------FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP 123
F + KN N F +IG GGFG VY + G + A+K L
Sbjct: 173 FCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYG---------CRKADTGKMYAMKCLDK 223
Query: 124 EGF---QGHKEWLSEVNYLGQLHHPN--LVKLIGFCLDGENRL-LVYEYMPKGSLENHLF 177
+ QG L+E L + + + + + ++L + + M G L HL
Sbjct: 224 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 283
Query: 178 RRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK 237
+ G +R A GL +H + V+YRD K +NILLD + ++SD GLA
Sbjct: 284 QHGVFS-EADMRFYAA-EIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA- 338
Query: 238 AGPTGDRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSG 287
+ + H S +GT GY APE L G + D +S G +L +LL G
Sbjct: 339 CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 71 FSELKNATRN-------FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP 123
F + KN N F +IG GGFG VY + G + A+K L
Sbjct: 174 FCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYG---------CRKADTGKMYAMKCLDK 224
Query: 124 EGF---QGHKEWLSEVNYLGQLHHPN--LVKLIGFCLDGENRL-LVYEYMPKGSLENHLF 177
+ QG L+E L + + + + + ++L + + M G L HL
Sbjct: 225 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 284
Query: 178 RRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK 237
+ G +R A GL +H + V+YRD K +NILLD + ++SD GLA
Sbjct: 285 QHGVFS-EADMRFYAA-EIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA- 339
Query: 238 AGPTGDRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSG 287
+ + H S +GT GY APE L G + D +S G +L +LL G
Sbjct: 340 CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY P G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 123
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 124 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 24/213 (11%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-SEVNYL 139
F +G G F V + A G + AVK + + +G + + +E+ L
Sbjct: 24 FEFKETLGTGAFSEV---------VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG--ARPLPWTLRIKVAIGAA 197
++ H N+V L + LV + + G L + + +G TL I+ + A
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL-IRQVLDA- 132
Query: 198 RGLSFLHEAEQQVIYRDFKASNILL---DSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+ +LH +++RD K N+L D E +SDFGL+K GD V + GT
Sbjct: 133 --VYYLHR--MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGT 185
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GY APE LA + D +S GV+ LL G
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R +T +
Sbjct: 170 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGATWTL 219
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 139 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P L KL D N +V EY P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + K++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + + +L HP VKL D E Y G L ++ + G+ T I
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 254
+A L +LH + +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 139 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 255 RGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
Y +PE L D+++ G ++ +L++G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P L KL D N +V EY P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + K++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E ++ P LVKL D N +V EY P G + +HL R G P
Sbjct: 90 LNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + K++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P L KL D N +V EY P G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + K++DFG AK RT +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLC 200
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL KP +
Sbjct: 28 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSKPFQSII 75
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 132
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 188
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 189 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P IG G +G V A G+ +AVKKL +P +
Sbjct: 21 TIWEVPERYQNLSP---IGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 125
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TD 181
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 182 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 47/236 (19%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGV-GMVIAVKKLKPEGFQGHKEWLSEVNY 138
+F +++G+G FG V K AR + A+KK++ + LSEV
Sbjct: 7 DFEEIAVLGQGAFGQVVK----------ARNALDSRYYAIKKIRHTE-EKLSTILSEVML 55
Query: 139 LGQLHHPNLVKLIGFCLDGEN-------------RLLVYEYMPKGSLENHLFRRG---AR 182
L L+H +V+ L+ N + EY +L + + R
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR 115
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPT 241
W L ++ LS++H Q +I+RD K NI +D N K+ DFGLAK +
Sbjct: 116 DEYWRLFRQIL----EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 242 GDRTHVSTQ-----------VMGTRGYAAPEYL-ATGRLTAKCDVYSFGVVLLELL 285
D + +Q +GT Y A E L TG K D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGF----QGHK 130
K NF ++G G +G V+ + + G + A+K LK + +
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFL------VRKISGHDTGKLYAMKVLKKATIVQKAKTTE 103
Query: 131 EWLSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTLR 189
+E L + + + + E +L L+ +Y+ G L HL +R R ++
Sbjct: 104 HTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR-ERFTEHEVQ 162
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I V L LH+ +IYRD K NILLDS + L+DFGL+K D T +
Sbjct: 163 IYVG-EIVLALEHLHKL--GIIYRDIKLENILLDSNGHVVLTDFGLSKE-FVADETERAY 218
Query: 250 QVMGTRGYAAPEYLATGR--LTAKCDVYSFGVVLLELLSG 287
GT Y AP+ + G D +S GV++ ELL+G
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V + D T G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-DTKT--------GLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPW----TLRI 190
E + + + P +V+L D +V EYMP G L N L P W T +
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEV 177
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
+A+ A + F+H RD K N+LLD + KL+DFG T
Sbjct: 178 VLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 251 VMGTRGYAAPEYLAT----GRLTAKCDVYSFGVVLLELLSG 287
V GT Y +PE L + G +CD +S GV L E+L G
Sbjct: 230 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 127
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TA 183
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 184 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLT 123
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
I + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 124 DDHVQFLIYQIL---RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 127
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TA 183
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 184 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPW----TLRI 190
E + + + P +V+L D +V EYMP G L N L P W T +
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEV 182
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
+A+ A + F+H RD K N+LLD + KL+DFG T
Sbjct: 183 VLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 251 VMGTRGYAAPEYLAT----GRLTAKCDVYSFGVVLLELLSG 287
V GT Y +PE L + G +CD +S GV L E+L G
Sbjct: 235 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 127
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TA 183
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 184 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLX 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLT 123
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
I + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 124 DDHVQFLIYQIL---RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPW----TLRI 190
E + + + P +V+L D +V EYMP G L N L P W T +
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEV 182
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQ 250
+A+ A + F+H RD K N+LLD + KL+DFG T
Sbjct: 183 VLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 251 VMGTRGYAAPEYLAT----GRLTAKCDVYSFGVVLLELLSG 287
V GT Y +PE L + G +CD +S GV L E+L G
Sbjct: 235 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 150 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 199
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLA 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 69
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 126
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 182
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 183 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 169
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 170 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 219
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 125
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TD 181
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 182 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 136 QI--VLTFEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKR--VKGRT---WXLC 186
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 69 FTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQ 127
FT +LK+ IG G +G V K +P G ++AVK+++ +
Sbjct: 19 FTAEDLKDLGE-------IGRGAYGSVNKM--------VHKPS-GQIMAVKRIRSTVDEK 62
Query: 128 GHKEWLSEVNYLGQLHH-PNLVKLIGFCLDGENRLLVYEYMPKG--SLENHLFRRGARPL 184
K+ L +++ + + P +V+ G + + E M +++ +
Sbjct: 63 EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVI 122
Query: 185 PWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDR 244
P + K+ + + L+ L E ++I+RD K SNILLD N KL DFG+ +G D
Sbjct: 123 PEEILGKITLATVKALNHLKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGI--SGQLVDS 179
Query: 245 THVSTQVMGTRGYAAPEYL----ATGRLTAKCDVYSFGVVLLELLSGR 288
T+ G R Y APE + + + DV+S G+ L EL +GR
Sbjct: 180 I-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 127
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 183
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 184 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 122
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 178
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 179 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 199
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK RT +
Sbjct: 144 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLC 194
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 125
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 181
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 182 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 125
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 181
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 182 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 15 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 62
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 63 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 119
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 175
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 176 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 122
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 178
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 179 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 122
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 178
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 179 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 36 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 83
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 140
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 196
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 197 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 59
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 116
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 172
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 173 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 27 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 74
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 131
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TD 187
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 188 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 13 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 60
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 117
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 173
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 174 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 28 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 75
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 132
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 188
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 189 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 28 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 75
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 132
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 188
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 189 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 13 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 60
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 117
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 173
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 174 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 69
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 126
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 182
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 183 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 35 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 82
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 83 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 139
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 195
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 196 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 14 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 61
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 62 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 118
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 174
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 175 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+++D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 27 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 74
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 131
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 187
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 188 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 69
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 126
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARH--TD 182
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 183 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 39 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 86
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 87 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 143
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 199
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 200 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 122
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARH--TD 178
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 179 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK + +P IG G G V A +G+ +AVKKL +P Q
Sbjct: 19 TFTVLKR-YQQLKP---IGSGAQGIV---------CAAFDTVLGINVAVKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ L ++H N++ L+ + ++ LV E M +
Sbjct: 66 HAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ T + TR Y APE + A D++S G ++ EL+ G
Sbjct: 179 N---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 30/229 (13%)
Query: 68 AFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EG 125
A T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 10 AKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQS 57
Query: 126 FQGHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRG 180
K E+ L + H N++ L+ L+ N + + ++ L N +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKC 115
Query: 181 ARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGP 240
A+ ++ + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 116 AKLTDDHVQFLI-YQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH-- 170
Query: 241 TGDRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
T D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 171 TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 111 GVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLD--GENRLLVYEYMP 168
G +V+ V K++ + +++ E L HPN++ ++G C + L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 169 KGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNA 228
GSL N L + + +K A+ ARG++FLH E + + ++++D + A
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA 152
Query: 229 KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA-----TGRLTAKCDVYSFGVVLLE 283
++S + + + R M + APE L T R +A D++SF V+L E
Sbjct: 153 RISMADVKFSFQSPGR-------MYAPAWVAPEALQKKPEDTNRRSA--DMWSFAVLLWE 203
Query: 284 LLS 286
L++
Sbjct: 204 LVT 206
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 35/281 (12%)
Query: 25 LPDKNGNFSMASSLKTNKSEKRPSGNFSMPRTECDILSCPNLKAFTFSELKNATRNFRPD 84
+ D +GN + ++ K ++RP N S LS K F F +L ++ P
Sbjct: 77 IEDHSGNGTFVNTELVGKGKRRPLNNNSEI-----ALSLSRNKVFVFFDLTVDDQSVYPK 131
Query: 85 SL---------IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-- 133
+L +G G G V + + + +I+ +K + L
Sbjct: 132 ALRDEYIMSKTLGSGACGEVKLAF----ERKTCKKVAIRIISKRKFAIGSAREADPALNV 187
Query: 134 -SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
+E+ L +L+HP ++K+ F D E+ +V E M G L + + G + L
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLY 244
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVST 249
+ +LHE +I+RD K N+LL S+ K++DFG +K G+ + + T
Sbjct: 245 FYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT 300
Query: 250 QVMGTRGYAAPEYLA---TGRLTAKCDVYSFGVVLLELLSG 287
+ GT Y APE L T D +S GV+L LSG
Sbjct: 301 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQGHKEWLSEVNYLGQLHH 144
+G G +G V + G+ IAVKKL +P + K E+ L + H
Sbjct: 59 VGSGAYGSVCSSY---------DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 109
Query: 145 PNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
N++ L+ L+ N + + ++ L N + + L + RG
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQFLIYQILRG 166
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
L ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + TR Y A
Sbjct: 167 LKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYRA 219
Query: 260 PEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
PE + D++S G ++ ELL+GR
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + + D ++ GV++ ++ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 34/248 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSEVNYLGQL 142
IGEG +G V+K A ++A+K+++ EG L E+ L +L
Sbjct: 10 IGEGTYGTVFK---------AKNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKEL 58
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
H N+V+L + LV+E+ + L+ + P ++ +GL F
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVK-SFLFQLLKGLGF 116
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
H + V++RD K N+L++ KL+DFGLA+A R + + V T Y P+
Sbjct: 117 CHS--RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDV 172
Query: 263 LATGRL-TAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRIMD 321
L +L + D++S G + EL + R + N VD +++FR++
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPL------FPGNDVD------DQLKRIFRLLG 220
Query: 322 IKLEGQYP 329
E Q+P
Sbjct: 221 TPTEEQWP 228
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 69
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 126
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 182
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 183 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
+E+ L +L+HP ++K+ F D E+ +V E M G L + + G + L
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQ 250
+ +LHE +I+RD K N+LL S+ K++DFG +K G+ + + T
Sbjct: 121 YQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 251 VMGTRGYAAPEYLA---TGRLTAKCDVYSFGVVLLELLSG 287
+ GT Y APE L T D +S GV+L LSG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 39 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 86
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 87 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 143
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 196
Query: 243 DRTHVSTQVMG---TRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
H ++ G TR Y APE + D++S G ++ ELL+GR
Sbjct: 197 ---HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ D+GLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
+E+ L +L+HP ++K+ F D E+ +V E M G L + + G + L
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQ 250
+ +LHE +I+RD K N+LL S+ K++DFG +K G+ + + T
Sbjct: 121 YQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 251 VMGTRGYAAPEYLA---TGRLTAKCDVYSFGVVLLELLSG 287
+ GT Y APE L T D +S GV+L LSG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 35/281 (12%)
Query: 25 LPDKNGNFSMASSLKTNKSEKRPSGNFSMPRTECDILSCPNLKAFTFSELKNATRNFRPD 84
+ D +GN + ++ K ++RP N S LS K F F +L ++ P
Sbjct: 91 IEDHSGNGTFVNTELVGKGKRRPLNNNSEIA-----LSLSRNKVFVFFDLTVDDQSVYPK 145
Query: 85 SL---------IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL-- 133
+L +G G G V + + + +I+ +K + L
Sbjct: 146 ALRDEYIMSKTLGSGACGEVKLAF----ERKTCKKVAIRIISKRKFAIGSAREADPALNV 201
Query: 134 -SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
+E+ L +L+HP ++K+ F D E+ +V E M G L + + G + L
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLY 258
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVST 249
+ +LHE +I+RD K N+LL S+ K++DFG +K G+ + + T
Sbjct: 259 FYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT 314
Query: 250 QVMGTRGYAAPEYLA---TGRLTAKCDVYSFGVVLLELLSG 287
+ GT Y APE L T D +S GV+L LSG
Sbjct: 315 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
+E+ L +L+HP ++K+ F D E+ +V E M G L + + G + L
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQ 250
+ +LHE +I+RD K N+LL S+ K++DFG +K G+ + + T
Sbjct: 121 YQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 251 VMGTRGYAAPEYLA---TGRLTAKCDVYSFGVVLLELLSG 287
+ GT Y APE L T D +S GV+L LSG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
+E+ L +L+HP ++K+ F D E+ +V E M G L + + G + L
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 126
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQ 250
+ +LHE +I+RD K N+LL S+ K++DFG +K G+ + + T
Sbjct: 127 YQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 181
Query: 251 VMGTRGYAAPEYLA---TGRLTAKCDVYSFGVVLLELLSG 287
+ GT Y APE L T D +S GV+L LSG
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 134 SEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
+E+ L +L+HP ++K+ F D E+ +V E M G L + + G + L
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 119
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQ 250
+ +LHE +I+RD K N+LL S+ K++DFG +K G+ + + T
Sbjct: 120 YQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 174
Query: 251 VMGTRGYAAPEYLA---TGRLTAKCDVYSFGVVLLELLSG 287
+ GT Y APE L T D +S GV+L LSG
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLT 123
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
I + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGL + T
Sbjct: 124 DDHVQFLIYQIL---RGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 59
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 116
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 172
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 173 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 35 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 82
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 83 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 139
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 195
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 196 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 36 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 83
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 140
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 196
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 197 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
HPN+VKL D + LV E + G L + ++ + T + +S +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHM 122
Query: 204 HEAEQQVIYRDFKASNILLDSE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAP 260
H+ V++RD K N+L E K+ DFG A+ P D + T T YAAP
Sbjct: 123 HDV--GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYAAP 178
Query: 261 EYLATGRLTAKCDVYSFGVVLLELLSGR 288
E L CD++S GV+L +LSG+
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 26 TIWEVPERYQNLAP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 73
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 74 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 130
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T
Sbjct: 131 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TD 186
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 187 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 36/212 (16%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V++ D+ T G AVKK++ E F+ + E+ L P
Sbjct: 66 VGRGSFGEVHR-MKDKQT--------GFQCAVKKVRLEVFR-----VEELVACAGLSSPR 111
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA-RGLSFLHE 205
+V L G +G + E + GSL + + G P R +G A GL +LH
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED---RALYYLGQALEGLEYLHT 168
Query: 206 AEQQVIYRDFKASNILLDSEFN-AKLSDFG---------LAKAGPTGDRTHVSTQVMGTR 255
+++++ D KA N+LL S+ + A L DFG L K+ TGD + GT
Sbjct: 169 --RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD------YIPGTE 220
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ APE + AK D++S ++L +L+G
Sbjct: 221 THMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 36/212 (16%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V++ D+ T G AVKK++ E F+ + E+ L P
Sbjct: 82 VGRGSFGEVHR-MKDKQT--------GFQCAVKKVRLEVFR-----VEELVACAGLSSPR 127
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA-RGLSFLHE 205
+V L G +G + E + GSL + + G P R +G A GL +LH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED---RALYYLGQALEGLEYLHT 184
Query: 206 AEQQVIYRDFKASNILLDSEFN-AKLSDFG---------LAKAGPTGDRTHVSTQVMGTR 255
+++++ D KA N+LL S+ + A L DFG L K+ TGD + GT
Sbjct: 185 --RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD------YIPGTE 236
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ APE + AK D++S ++L +L+G
Sbjct: 237 THMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 42/245 (17%)
Query: 71 FSELKNAT--RNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP--EGF 126
F +KN N+ LIG G +GYVY + D++T + +A+KK+ E
Sbjct: 16 FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAY-DKNTEKN--------VAIKKVNRMFEDL 66
Query: 127 QGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYE--YMPKGSLENHLFRRGARPL 184
K L E+ L +L +++L + + LL ++ Y+ ++ L + P+
Sbjct: 67 IDCKRILREITILNRLKSDYIIRLYDLIIPDD--LLKFDELYIVLEIADSDLKKLFKTPI 124
Query: 185 PWTLR-IKVAI-GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
T IK + G +F+HE+ +I+RD K +N LL+ + + K+ DFGLA+ +
Sbjct: 125 FLTEEHIKTILYNLLLGENFIHES--GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
Query: 243 DRTHVSTQV--------------------MGTRGYAAPE-YLATGRLTAKCDVYSFGVVL 281
T++ + + TR Y APE L T D++S G +
Sbjct: 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIF 242
Query: 282 LELLS 286
ELL+
Sbjct: 243 AELLN 247
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y AP + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 47/236 (19%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGV-GMVIAVKKLKPEGFQGHKEWLSEVNY 138
+F +++G+G FG V K AR + A+KK++ + LSEV
Sbjct: 7 DFEEIAVLGQGAFGQVVK----------ARNALDSRYYAIKKIRHTE-EKLSTILSEVXL 55
Query: 139 LGQLHHPNLVKLIGFCLDGEN-------------RLLVYEYMPKGSLENHLFRRG---AR 182
L L+H +V+ L+ N + EY +L + + R
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR 115
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPT 241
W L ++ LS++H Q +I+R+ K NI +D N K+ DFGLAK +
Sbjct: 116 DEYWRLFRQIL----EALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 242 GDRTHVSTQ-----------VMGTRGYAAPEYL-ATGRLTAKCDVYSFGVVLLELL 285
D + +Q +GT Y A E L TG K D YS G++ E +
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
+IG G FG V++ + E +A+KK+ Q + E+ + + HP
Sbjct: 47 VIGNGSFGVVFQAKLVESD----------EVAIKKV----LQDKRFKNRELQIMRIVKHP 92
Query: 146 NLVKLIGFCLDGENRL------LVYEYMPKGSLE-NHLFRRGARPLPWTLRIKVAIGAAR 198
N+V L F ++ LV EY+P+ + + + + +P L R
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
L+++H + +RD K N+LLD KL DFG AK G+ + + +R Y
Sbjct: 153 SLAYIHSI--GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSRYY 207
Query: 258 AAPEYL-ATGRLTAKCDVYSFGVVLLELLSGR 288
APE + T D++S G V+ EL+ G+
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 36 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 83
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 140
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 193
Query: 243 DRTHVSTQVMG---TRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
H ++ G TR Y APE + D++S G ++ ELL+GR
Sbjct: 194 ---HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 123/317 (38%), Gaps = 59/317 (18%)
Query: 87 IGEGGFGYV--YKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHH 144
+GEGGF YV +G D H A+K++ Q +E E + +H
Sbjct: 37 LGEGGFSYVDLVEGLHDGH-----------FYALKRILCHEQQDREEAQREADMHRLFNH 85
Query: 145 PNLVKLIGFCL----DGENRLLVYEYMPKGSLENHLFRRGAR-------PLPWTLRIKVA 193
PN+++L+ +CL L+ + +G+L N + R + + W L
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL----- 140
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFG---LAKAGPTGDRTHVSTQ 250
+G RGL +H + +RD K +NILL E L D G A G R ++ Q
Sbjct: 141 LGICRGLEAIH--AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198
Query: 251 VMG----TRGYAAPEYLATGR---LTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLV 303
T Y APE + + + DV+S G VL ++ G D
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK------ 252
Query: 304 DWAKPYLGDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCISEAKVRPSMSEVLSALEQL 363
GD L + + Q P+ + + +L + RP + +LS LE L
Sbjct: 253 -------GDSVALAVQNQLSIP-QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304
Query: 364 PPPRDPASPSNSDPQVI 380
PP +P Q++
Sbjct: 305 QPP----APGQHTTQIL 317
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 36/212 (16%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V++ D+ T G AVKK++ E F+ + E+ L P
Sbjct: 80 LGRGSFGEVHR-MKDKQT--------GFQCAVKKVRLEVFR-----VEELVACAGLSSPR 125
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAA-RGLSFLHE 205
+V L G +G + E + GSL + + G P R +G A GL +LH
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED---RALYYLGQALEGLEYLHT 182
Query: 206 AEQQVIYRDFKASNILLDSEFN-AKLSDFG---------LAKAGPTGDRTHVSTQVMGTR 255
+++++ D KA N+LL S+ + A L DFG L K+ TGD + GT
Sbjct: 183 --RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD------YIPGTE 234
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ APE + AK D++S ++L +L+G
Sbjct: 235 THMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 243 DRTHVSTQVMG---TRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
H ++ G TR Y APE + D++S G ++ ELL+GR
Sbjct: 174 ---HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 173
Query: 243 DRTHVSTQVMG---TRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
H ++ G TR Y APE + D++S G ++ ELL+GR
Sbjct: 174 ---HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK + +P IG G G V A +G+ +AVKKL +P Q
Sbjct: 17 TFTVLKR-YQQLKP---IGSGAQGIV---------CAAFDTVLGINVAVKKLSRPFQNQT 63
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ L ++H N++ L+ + ++ LV E M +
Sbjct: 64 HAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH 123
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 124 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAST 176
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ T + TR Y APE + D++S G ++ EL+ G
Sbjct: 177 N---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR------RGARPLPWTLRIKVAIGA 196
HPN++ L DG+ +V E M G L + + R R A + +T+
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI-------- 125
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEF----NAKLSDFGLAKAGPTGDRTHVSTQVM 252
+ + +LH Q V++RD K SNIL E + ++ DFG AK + ++
Sbjct: 126 TKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--C 181
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
T + APE L A CD++S GV+L +L+G
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 17/203 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V++ G V K + +E++ + QLHHP
Sbjct: 59 LGSGAFGVVHR---------CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
L+ L D +L+ E++ G L + + + + I A GL +H
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMH-- 166
Query: 207 EQQVIYRDFKASNILLDSE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
E +++ D K NI+ +++ + K+ DFGLA + V+T T +AAPE +
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVD 223
Query: 265 TGRLTAKCDVYSFGVVLLELLSG 287
+ D+++ GV+ LLSG
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 59
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 116
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR----- 169
Query: 243 DRTHVSTQVMG---TRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
H ++ G TR Y APE + D++S G ++ ELL+GR
Sbjct: 170 ---HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 133 LSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV 192
L+E L ++ P LVKL D N +V EY+ G + +HL R G P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
I +LH + +IYRD K N+L+D + +++DFG AK R T +
Sbjct: 149 QI--VLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXL 198
Query: 253 -GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT APE + + D ++ GV++ E+ +G
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ FGLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 12/160 (7%)
Query: 134 SEVNYLGQLHHPNLVKLIGFCLD-GENRL-LVYEYMPKGSLENHLFRRGARPLPWTLRIK 191
E+ L +L HPN+VKL+ D E+ L +V+E + +G + + +PL
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSEDQARF 141
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQV 251
+G+ +LH Q++I+RD K SN+L+ + + K++DFG++ D +T
Sbjct: 142 YFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT-- 197
Query: 252 MGTRGYAAPEYLATGR--LTAKC-DVYSFGVVLLELLSGR 288
+GT + APE L+ R + K DV++ GV L + G+
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 123 LDHERMSYLL-----YQMLXGIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 233 QWNKVIEQ 240
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP--EGFQGHKEWLSEVNYLGQLH 143
LIG G +G H EA V+A+KK+ E K L E+ L +L+
Sbjct: 60 LIGTGSYG---------HVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 144 HPNLVKLIGFCL--DGENRLLVYEYMPKGSLE-NHLFRRGARPLPWT-LRIKVAI-GAAR 198
H ++VK++ + D E +Y + + LFR P+ T L IK +
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT---PVYLTELHIKTLLYNLLV 167
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA-------------GPTGDRT 245
G+ ++H A +++RD K +N L++ + + K+ DFGLA+ P D
Sbjct: 168 GVKYVHSA--GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 246 HVST---------QVMG---TRGYAAPE-YLATGRLTAKCDVYSFGVVLLELLS 286
++ T Q+ G TR Y APE L T DV+S G + ELL+
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 34/248 (13%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSEVNYLGQL 142
IGEG +G V+K A ++A+K+++ EG L E+ L +L
Sbjct: 10 IGEGTYGTVFK---------AKNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKEL 58
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
H N+V+L + LV+E+ + L+ + P ++ +GL F
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVK-SFLFQLLKGLGF 116
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
H + V++RD K N+L++ KL++FGLA+A R + + V T Y P+
Sbjct: 117 CHS--RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDV 172
Query: 263 LATGRL-TAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRIMD 321
L +L + D++S G + EL + R + N VD +++FR++
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPL------FPGNDVD------DQLKRIFRLLG 220
Query: 322 IKLEGQYP 329
E Q+P
Sbjct: 221 TPTEEQWP 228
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ D GLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 57 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 100
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 160
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 161 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 213
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 214 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 271 QWNKVIEQ 278
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ D GLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR---GARPLPWTLRIKVAIGAARG 199
HPN++ L DG++ LV E M G L + + R+ R + L IG +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH---TIG--KT 133
Query: 200 LSFLHEAEQQVIYRDFKASNIL-LDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+ +LH Q V++RD K SNIL +D N ++ DFG AK + ++ T
Sbjct: 134 VEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TA 189
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ APE L CD++S G++L +L+G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVVAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLV-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S GV++ E++ G
Sbjct: 179 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 19 TFTVLKRY-QNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 233 QWNKVIEQ 240
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 19 TFTVLKRY-QNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 233 QWNKVIEQ 240
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRR---GARPLPWTLRIKVAIGAARG 199
HPN++ L DG++ LV E M G L + + R+ R + L IG +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH---TIG--KT 133
Query: 200 LSFLHEAEQQVIYRDFKASNIL-LDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+ +LH Q V++RD K SNIL +D N ++ DFG AK + ++ T
Sbjct: 134 VEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TA 189
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ APE L CD++S G++L +L+G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 57 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 100
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 160
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 161 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 213
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 214 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 271 QWNKVIEQ 278
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 43/241 (17%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKP--EGFQGHKEWLSEVN 137
N+ LIG G +GYVY + +A+KK+ E K L E+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY---------DKNANKNVAIKKVNRMFEDLIDCKRILREIT 79
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYE--YMPKGSLENHLFRRGARPLPWTLR-IKVAI 194
L +L +++L + + LL ++ Y+ ++ L + P+ T + +K +
Sbjct: 80 ILNRLKSDYIIRLHDLIIPED--LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTIL 137
Query: 195 -GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS----- 248
G F+HE+ +I+RD K +N LL+ + + K+ DFGLA+ + H+
Sbjct: 138 YNLLLGEKFIHES--GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEE 195
Query: 249 ------------------TQVMGTRGYAAPE-YLATGRLTAKCDVYSFGVVLLELLSGRR 289
T + TR Y APE L T D++S G + ELL+ +
Sbjct: 196 KEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
Query: 290 A 290
+
Sbjct: 256 S 256
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 20 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 63
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 123
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 124 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 176
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 177 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 234 QWNKVIEQ 241
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G+ +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ D GLA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 18 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 61
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 121
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 122 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 174
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 175 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 231
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 232 QWNKVIEQ 239
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 233 QWNKVIEQ 240
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 233 QWNKVIEQ 240
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 20 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 63
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 123
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 124 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 176
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 177 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 234 QWNKVIEQ 241
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 62
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 123 LDHERMSYLL-----YQMLXGIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 176 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 233 QWNKVIEQ 240
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 13 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 56
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 116
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 117 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 169
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 170 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 227 QWNKVIEQ 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 12 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 55
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 115
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 116 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 168
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 169 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 226 QWNKVIEQ 233
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
++G+G +G VY G + + IA+K++ + + E+ L H
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVR---------IAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 146 NLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLP--------WTLRIKVAIGA 196
N+V+ +G F +G ++ + E +P GSL + L R PL +T +I
Sbjct: 80 NIVQYLGSFSENGFIKIFM-EQVPGGSL-SALLRSKWGPLKDNEQTIGFYTKQI------ 131
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTR 255
GL +LH+ Q+++RD K N+L+++ K+SDFG +K + GT
Sbjct: 132 LEGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTL 187
Query: 256 GYAAPEYLATG-RLTAK-CDVYSFGVVLLELLSGR 288
Y APE + G R K D++S G ++E+ +G+
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 13 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 56
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 116
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 117 LDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLART 169
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 170 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 227 QWNKVIEQ 234
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 30/227 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KP-EGFQ 127
T E+ +N P +G G +G V A G +AVKKL +P +
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGF-----CLDGENRLLVYEYMPKGSLENHLFRRGAR 182
K E+ L + H N++ L+ L+ N + + ++ L N + +
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQ 120
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
L + RGL ++H A+ +I+RD K SN+ ++ + K+ DF LA+ T
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARH--TD 176
Query: 243 DRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
D T + TR Y APE + D++S G ++ ELL+GR
Sbjct: 177 DEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLV-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S GV++ E++ G
Sbjct: 179 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 43/248 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYV---YKGWIDEHTLEAARPGVGMVIAVKKL-KPEG 125
TF+ LK +N +P IG G G V Y +D + +A+KKL +P
Sbjct: 12 TFTVLKR-YQNLKP---IGSGAQGIVCAAYDAVLDRN------------VAIKKLSRPFQ 55
Query: 126 FQGH-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFR 178
Q H K E+ + ++H N++ L+ + ++ LV E M +
Sbjct: 56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 115
Query: 179 RGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKA 238
+ + L G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 116 LDHERMSYLL-----YQMLXGIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLART 168
Query: 239 GPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLE------LLSGRRAVD 292
T + + T + TR Y APE + D++S G ++ E L GR +D
Sbjct: 169 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
Query: 293 KTRVGAEQ 300
+ EQ
Sbjct: 226 QWNKVIEQ 233
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+ +G+G F V + LE A +I KKL FQ + E
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFA----AKIINTKKLSARDFQKLER---EARIC 82
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAAR 198
+L HPN+V+L + LV++ + G L E+ + R + I+ +
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---E 139
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+++ H +++R+ K N+LL S+ KL+DFGLA + H GT
Sbjct: 140 SIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 194
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GY +PE L + D+++ GV+L LL G
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S G ++ E++ G
Sbjct: 179 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+ +G+G F V + LE A +I KKL FQ + E
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFA----AKIINTKKLSARDFQKLER---EARIC 59
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAAR 198
+L HPN+V+L + LV++ + G L E+ + R + I+ +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---E 116
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+++ H +++R+ K N+LL S+ KL+DFGLA + H GT
Sbjct: 117 SIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 171
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GY +PE L + D+++ GV+L LL G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S G ++ E++ G
Sbjct: 179 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 20 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 66
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 67 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 126
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 127 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S G ++ E++ G
Sbjct: 180 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+ +G+G F V + LE A +I KKL FQ + E
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFA----AKIINTKKLSARDFQKLER---EARIC 58
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAAR 198
+L HPN+V+L + LV++ + G L E+ + R + I+ +
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---E 115
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+++ H +++R+ K N+LL S+ KL+DFGLA + H GT
Sbjct: 116 SIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 170
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GY +PE L + D+++ GV+L LL G
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 130/302 (43%), Gaps = 45/302 (14%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH-H 144
L+GEG + V +G + G AVK ++ + EV L Q +
Sbjct: 20 LLGEGAYAKV-QGAVSLQN--------GKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLH 204
N+++LI F D LV+E + GS+ H+ ++ R+ + AA L FLH
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFLH 128
Query: 205 EAEQQVIYRDFKASNILLDSEFNA---KLSDFGLAKAGPTGDR-THVSTQVM----GTRG 256
+ + +RD K NIL +S K+ DF L + T ++T + G+
Sbjct: 129 T--KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 257 YAAPEYLA--TGRLT---AKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG 311
Y APE + T + T +CD++S GVVL +LSG VG W
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF----VGHCGADCGW------ 236
Query: 312 DRRKLFRIMDIKL-----EGQY--PQKGAYMVAILALQCISEAKVRPSMSEVLSALEQLP 364
DR ++ R+ KL EG+Y P K ++ A IS+ VR + + LSA + L
Sbjct: 237 DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDA-KQRLSAAQVLQ 295
Query: 365 PP 366
P
Sbjct: 296 HP 297
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S G ++ E++ G
Sbjct: 179 ---SFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHP 145
++G+G +G VY G + + IA+K++ + + E+ L H
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVR---------IAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 146 NLVKLIG-FCLDGENRLLVYEYMPKGSLENHLFRRGARPLP--------WTLRIKVAIGA 196
N+V+ +G F +G ++ + E +P GSL + L R PL +T +I
Sbjct: 66 NIVQYLGSFSENGFIKIFM-EQVPGGSL-SALLRSKWGPLKDNEQTIGFYTKQI------ 117
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTR 255
GL +LH+ Q+++RD K N+L+++ K+SDFG +K + GT
Sbjct: 118 LEGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTL 173
Query: 256 GYAAPEYLATG-RLTAK-CDVYSFGVVLLELLSGR 288
Y APE + G R K D++S G ++E+ +G+
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 40/232 (17%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
T E++ R+ +P +G G +G V +D T G +A+KKL +P FQ
Sbjct: 19 TAWEVRAVYRDLQP---VGSGAYGAVCSA-VDGRT--------GAKVAIKKLYRP--FQS 64
Query: 129 H---KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPK--GSLENHLF 177
K E+ L + H N++ L+ D + LV +M G L H
Sbjct: 65 ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE- 123
Query: 178 RRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK 237
+ G + + + +GL ++H A +I+RD K N+ ++ + K+ DFGLA+
Sbjct: 124 KLGEDRIQF-----LVYQMLKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLAR 176
Query: 238 AGPTGDRTHVSTQVMGTRGYAAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
+ V TR Y APE + R T D++S G ++ E+++G+
Sbjct: 177 QADSEMXGXVV-----TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYL 139
N+ +G+G F V + LE A +I KKL FQ + E
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFA----AKIINTKKLSARDFQKLER---EARIC 59
Query: 140 GQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAAR 198
+L HPN+V+L + LV++ + G L E+ + R + I+ +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---E 116
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+++ H +++R+ K N+LL S+ KL+DFGLA + H GT
Sbjct: 117 SIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 171
Query: 256 GYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GY +PE L + D+++ GV+L LL G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 111 GVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLD--GENRLLVYEYMP 168
G +V+ V K++ + +++ E L HPN++ ++G C + L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 169 KGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNA 228
GSL N L + + +K A+ ARG +FLH E + + ++ +D + A
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTA 152
Query: 229 KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
++S + + + R + V PE T R +A D +SF V+L EL++
Sbjct: 153 RISXADVKFSFQSPGRXYAPAWVAPEALQKKPE--DTNRRSA--DXWSFAVLLWELVT 206
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 116 IAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKL--------------IGFCLDGENRL 161
+A+KK+ Q K L E+ + +L H N+VK+ +G + +
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 162 LVYEYMPK---GSLENH-LFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKA 217
+V EYM LE L AR + L RGL ++H A V++RD K
Sbjct: 99 IVQEYMETDLANVLEQGPLLEEHARLFMYQL--------LRGLKYIHSA--NVLHRDLKP 148
Query: 218 SNILLDSE-FNAKLSDFGLAKAGP--TGDRTHVSTQVMGTRGYAAPEYLAT-GRLTAKCD 273
+N+ +++E K+ DFGLA+ + H+S ++ T+ Y +P L + T D
Sbjct: 149 ANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAID 207
Query: 274 VYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLG--DRRKLFRIM 320
+++ G + E+L+G+ + L+ + P + DR++L ++
Sbjct: 208 MWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVI 256
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK----PEGFQGHKEWLSEV 136
+R + +GEG +G VYK ID T E +A+K+++ EG G + EV
Sbjct: 36 YRRITKLGEGTYGEVYKA-IDTVTNET--------VAIKRIRLEHEEEGVPGTA--IREV 84
Query: 137 NYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRI--KVAI 194
+ L +L H N+++L L++EY EN L + + ++R+
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMDKNPDVSMRVIKSFLY 139
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNA-----KLSDFGLAKAGPTGDRTHVST 249
G++F H ++ ++RD K N+LL + K+ DFGLA+A R T
Sbjct: 140 QLINGVNFCH--SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--T 195
Query: 250 QVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELL 285
+ T Y PE L R + D++S + E+L
Sbjct: 196 HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLV-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S G ++ E++ G
Sbjct: 179 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 35/172 (20%)
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLP-- 185
G +W++ ++Y Q D N LV +Y G L L + R LP
Sbjct: 131 GDSKWITTLHYAFQ--------------DDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEE 175
Query: 186 ----WTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + +AI + L ++H RD K NIL+D + +L+DFG +
Sbjct: 176 MARFYLAEMVIAIDSVHQLHYVH--------RDIKPDNILMDMNGHIRLADFG-SCLKLM 226
Query: 242 GDRTHVSTQVMGTRGYAAPEYLAT-----GRLTAKCDVYSFGVVLLELLSGR 288
D T S+ +GT Y +PE L GR +CD +S GV + E+L G
Sbjct: 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S G ++ E++ G
Sbjct: 179 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S G ++ E++ G
Sbjct: 179 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 21 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 67
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 68 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 127
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 128 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 180
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + + TR Y APE + D++S G ++ E++ G
Sbjct: 181 ---SFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 126 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT 178
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ + T + TR Y APE + D++S G ++ E++ G
Sbjct: 179 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 31/267 (11%)
Query: 32 FSMASSLKTNKSEKRPSGNFSMPRT------ECDILSCPNLKAFTFSELKNATRNFRPDS 85
S + K N K P F P+T + D +C ++ F E+K + P
Sbjct: 1 MSQSKGKKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNF-EVK--ADDLEPIM 57
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQGHKEWLSEVNY-LGQLH 143
+G G +G V K G ++AVK+++ Q K L +++ + +
Sbjct: 58 ELGRGAYGVVEK---------MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD 108
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKG--SLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
P V G + + E M + +G + +P + K+A+ + L
Sbjct: 109 CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG-QTIPEDILGKIAVSIVKALE 167
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE 261
LH ++ VI+RD K SN+L+++ K+ DFG+ +G D T G + Y APE
Sbjct: 168 HLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDSV-AKTIDAGCKPYMAPE 223
Query: 262 ----YLATGRLTAKCDVYSFGVVLLEL 284
L + K D++S G+ ++EL
Sbjct: 224 RINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 24 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 70
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 71 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 130
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 131 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 183
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS------GRRAVDKTR 295
+ + T + TR Y APE + D++S G ++ E++ GR +D+
Sbjct: 184 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 240
Query: 296 VGAEQ 300
EQ
Sbjct: 241 KVIEQ 245
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 13 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 59
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 60 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 119
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+ T
Sbjct: 120 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 172
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS------GRRAVDKTR 295
+ + T + TR Y APE + D++S G ++ E++ GR +D+
Sbjct: 173 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 229
Query: 296 VGAEQ 300
EQ
Sbjct: 230 KVIEQ 234
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFR------RGARPLPWTLRIKVAIGA 196
HPN++ L DG+ +V E G L + + R R A + +T+
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTI-------- 125
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEF----NAKLSDFGLAKAGPTGDRTHVSTQVM 252
+ + +LH Q V++RD K SNIL E + ++ DFG AK + + T
Sbjct: 126 TKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLXTPCY 182
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
T + APE L A CD++S GV+L L+G
Sbjct: 183 -TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL----KPEGFQGHKEWLSEVNYLGQL 142
IG+G FG V+K A G +A+KK+ + EGF L E+ L L
Sbjct: 26 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 143 HHPNLVKLIGFCLDGE---NRL-----LVYEYMPK---GSLENHLFRRGARPLPWTLRIK 191
H N+V LI C NR LV+++ G L N L + + +++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS--T 249
+ GL ++H ++++RD KA+N+L+ + KL+DFGLA+A + +
Sbjct: 135 L-----NGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 250 QVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLS 286
+ T Y PE L R D++ G ++ E+ +
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS------EVNYLG 140
+G G F V K + G G A K +K + +S EVN L
Sbjct: 13 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
++ HPN++ L + + +L+ E + G L + L + + + I G+
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGV 121
Query: 201 SFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
+LH +++ + D K NI LLD KL DFG+A G+ + GT
Sbjct: 122 HYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 176
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ APE + L + D++S GV+ LLSG
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
+ + I A + FLH + +++RD K SNI + K+ DFGL A +
Sbjct: 167 LHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 250 QVM----------GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELL-SGRRAVDKTRV 296
M GT+ Y +PE + + K D++S G++L ELL S +++ R+
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI 282
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLK-PEGFQGHKEWLSEVNY 138
+F P +G GGFG V+ EA A+K+++ P ++ + EV
Sbjct: 7 DFEPIQCMGRGGFGVVF---------EAKNKVDDCNYAIKRIRLPNRELAREKVMREVKA 57
Query: 139 LGQLHHPNLVKLIGFCLD 156
L +L HP +V+ L+
Sbjct: 58 LAKLEHPGIVRYFNAWLE 75
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 135 EVNYLGQLHHPNLVKLIGFC-LDGENRLLVYEYMPKG-SLENHLFRRGARPLPWTLRIKV 192
E G+L P++V + F +DG+ L V + G L L R+G P + I
Sbjct: 84 EARTAGRLQEPHVVPIHDFGEIDGQ--LYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVR 141
Query: 193 AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVM 252
IG+ + +RD K NIL+ ++ A L DFG+A A T + V
Sbjct: 142 QIGS----ALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV- 196
Query: 253 GTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
GT Y APE + T + D+Y+ VL E L+G
Sbjct: 197 GTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS------EVNYLG 140
+G G F V K + G G A K +K + +S EVN L
Sbjct: 20 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
++ HPN++ L + + +L+ E + G L + L + + + I G+
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGV 128
Query: 201 SFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
+LH +++ + D K NI LLD KL DFG+A G+ + GT
Sbjct: 129 HYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 183
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ APE + L + D++S GV+ LLSG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL----KPEGFQGHKEWLSEVNYLGQL 142
IG+G FG V+K A G +A+KK+ + EGF L E+ L L
Sbjct: 26 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 143 HHPNLVKLIGFCLDGE---NRL-----LVYEYMPK---GSLENHLFRRGARPLPWTLRIK 191
H N+V LI C NR LV+++ G L N L + + +++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS--T 249
+ GL ++H ++++RD KA+N+L+ + KL+DFGLA+A + +
Sbjct: 135 L-----NGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 250 QVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLS 286
+ T Y PE L R D++ G ++ E+ +
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL----KPEGFQGHKEWLSEVNYLGQL 142
IG+G FG V+K A G +A+KK+ + EGF L E+ L L
Sbjct: 25 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 73
Query: 143 HHPNLVKLIGFCLDGE---NRL-----LVYEYMPK---GSLENHLFRRGARPLPWTLRIK 191
H N+V LI C NR LV+++ G L N L + + +++
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 133
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS--T 249
+ GL ++H ++++RD KA+N+L+ + KL+DFGLA+A + +
Sbjct: 134 L-----NGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 250 QVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLS 286
+ T Y PE L R D++ G ++ E+ +
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL----KPEGFQGHKEWLSEVNYLGQL 142
IG+G FG V+K A G +A+KK+ + EGF L E+ L L
Sbjct: 26 IGQGTFGEVFK---------ARHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLL 74
Query: 143 HHPNLVKLIGFCLDGE---NRL-----LVYEYMPK---GSLENHLFRRGARPLPWTLRIK 191
H N+V LI C NR LV+++ G L N L + + +++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 192 VAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVS--T 249
+ GL ++H ++++RD KA+N+L+ + KL+DFGLA+A + +
Sbjct: 135 L-----NGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 250 QVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLS 286
+ T Y PE L R D++ G ++ E+ +
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 26/211 (12%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS------EVNYLG 140
+G G F V K + G G A K +K + +S EVN L
Sbjct: 34 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
++ HPN++ L + + +L+ E + G L + L + + + I G+
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGV 142
Query: 201 SFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
+LH +++ + D K NI LLD KL DFG+A G+ + GT
Sbjct: 143 HYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPE 197
Query: 257 YAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ APE + L + D++S GV+ LLSG
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 47/223 (21%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL--SEVNYLGQLH 143
IG+G FG V++G W E +AVK + + W +E+ L
Sbjct: 50 IGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFREAEIYQTVMLR 94
Query: 144 HPNLVKLIGFCLDGENR--------LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
H N++ I +N+ LV +Y GSL ++L R + IK+A+
Sbjct: 95 HENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALS 147
Query: 196 AARGLSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVS 248
A GL+ LH + + + +RD K+ NIL+ ++D GLA + D ++
Sbjct: 148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 207
Query: 249 -TQVMGTRGYAAPEYLATG------RLTAKCDVYSFGVVLLEL 284
+GT+ Y APE L + D+Y+ G+V E+
Sbjct: 208 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 29/214 (13%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
F +S +G G VY+ + G A+K LK K +E+ L
Sbjct: 55 FEVESELGRGATSIVYR---------CKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLL 103
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAAR-- 198
+L HPN++KL LV E + G L + + +G + A A +
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE------RDAADAVKQI 157
Query: 199 --GLSFLHEAEQQVIYRDFKASNILLDS---EFNAKLSDFGLAKAGPTGDRTHVSTQVMG 253
+++LHE +++RD K N+L + + K++DFGL+K + + V G
Sbjct: 158 LEAVAYLHE--NGIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKTVCG 212
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
T GY APE L + D++S G++ LL G
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 120
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 121 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 175
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 217
Query: 311 GDRRK 315
GD ++
Sbjct: 218 GDTKQ 222
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 17/203 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V++ G A K + + E+ + L HP
Sbjct: 59 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV L D +++YE+M G L + + + ++ +GL +H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMH-- 166
Query: 207 EQQVIYRDFKASNILLDSEFNA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
E ++ D K NI+ ++ + KL DFGL V+T GT +AAPE
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 223
Query: 265 TGRLTAKCDVYSFGVVLLELLSG 287
+ D++S GV+ LLSG
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSG 246
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 47/223 (21%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL--SEVNYLGQLH 143
IG+G FG V++G W E +AVK + + W +E+ L
Sbjct: 37 IGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFREAEIYQTVMLR 81
Query: 144 HPNLVKLIGFCLDGENR--------LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
H N++ I +N+ LV +Y GSL ++L R + IK+A+
Sbjct: 82 HENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALS 134
Query: 196 AARGLSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVS 248
A GL+ LH + + + +RD K+ NIL+ ++D GLA + D ++
Sbjct: 135 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 194
Query: 249 -TQVMGTRGYAAPEYLATG------RLTAKCDVYSFGVVLLEL 284
+GT+ Y APE L + D+Y+ G+V E+
Sbjct: 195 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 120
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 121 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 175
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 217
Query: 311 GDRRK 315
GD ++
Sbjct: 218 GDTKQ 222
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 43/239 (17%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL 133
+ R+ +G+G +G V++G W E+ +AVK + K W
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 48
Query: 134 SEVNYLG--QLHHPNLVKLIGFCLDGENR----LLVYEYMPKGSLENHLFRRGARPLPWT 187
E L H N++ I + + L+ Y GSL ++L L
Sbjct: 49 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTV 105
Query: 188 LRIKVAIGAARGLSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLA--KAG 239
+++ + A GL+ LH + + + +RD K+ NIL+ ++D GLA +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 240 PTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKC-------DVYSFGVVLLELLSGRRAV 291
T + +GT+ Y APE L + C D+++FG+VL E+ RR V
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 47/223 (21%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL--SEVNYLGQLH 143
IG+G FG V++G W E +AVK + + W +E+ L
Sbjct: 12 IGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFREAEIYQTVMLR 56
Query: 144 HPNLVKLIGFCLDGENR--------LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
H N++ I +N+ LV +Y GSL ++L R + IK+A+
Sbjct: 57 HENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALS 109
Query: 196 AARGLSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVS 248
A GL+ LH + + + +RD K+ NIL+ ++D GLA + D ++
Sbjct: 110 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 169
Query: 249 -TQVMGTRGYAAPEYLATG------RLTAKCDVYSFGVVLLEL 284
+GT+ Y APE L + D+Y+ G+V E+
Sbjct: 170 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 47/223 (21%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL--SEVNYLGQLH 143
IG+G FG V++G W E +AVK + + W +E+ L
Sbjct: 17 IGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFREAEIYQTVMLR 61
Query: 144 HPNLVKLIGFCLDGENR--------LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
H N++ I +N+ LV +Y GSL ++L R + IK+A+
Sbjct: 62 HENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALS 114
Query: 196 AARGLSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVS 248
A GL+ LH + + + +RD K+ NIL+ ++D GLA + D ++
Sbjct: 115 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 174
Query: 249 -TQVMGTRGYAAPEYLATG------RLTAKCDVYSFGVVLLEL 284
+GT+ Y APE L + D+Y+ G+V E+
Sbjct: 175 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
RGL ++H A +I+RD K SN+ ++ + ++ DFGLA+ T + TR Y
Sbjct: 134 RGLKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRWY 186
Query: 258 AAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
APE + D++S G ++ ELL G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 124/308 (40%), Gaps = 43/308 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVG-------MVIAVKKLK 122
F +++N F + +G+G F ++KG R VG + +K L
Sbjct: 1 VFHKIRNEDLIF--NESLGQGTFTKIFKG---------VRREVGDYGQLHETEVLLKVLD 49
Query: 123 PEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGAR 182
+ + + + +L H +LV G C+ G+ +LV E++ GSL+ +L ++
Sbjct: 50 KAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKN 108
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPT 241
+ +++VA A + FL E +I+ + A NILL E + K + K + P
Sbjct: 109 CINILWKLEVAKQLAAAMHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166
Query: 242 GDRTHVSTQVMGTR-GYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAVDKTRVGAE 299
T + ++ R + PE + + L D +SFG L E+ SG
Sbjct: 167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG----------- 215
Query: 300 QNLVDWAKPYLGDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLS 358
D L +RKL D Q P A +A L C+ E RPS ++
Sbjct: 216 ----DKPLSALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
Query: 359 ALEQLPPP 366
L L P
Sbjct: 269 DLNSLFTP 276
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 126 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-- 176
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS------GRRAVDKTR 295
G + +V+ TR Y APE + D++S G ++ E++ GR +D+
Sbjct: 177 GTSFMMEPEVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWN 235
Query: 296 VGAEQ 300
EQ
Sbjct: 236 KVIEQ 240
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 47/223 (21%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL--SEVNYLGQLH 143
IG+G FG V++G W E +AVK + + W +E+ L
Sbjct: 11 IGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFREAEIYQTVMLR 55
Query: 144 HPNLVKLIGFCLDGENR--------LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
H N++ I +N+ LV +Y GSL ++L R + IK+A+
Sbjct: 56 HENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALS 108
Query: 196 AARGLSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVS 248
A GL+ LH + + + +RD K+ NIL+ ++D GLA + D ++
Sbjct: 109 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 168
Query: 249 -TQVMGTRGYAAPEYLATG------RLTAKCDVYSFGVVLLEL 284
+GT+ Y APE L + D+Y+ G+V E+
Sbjct: 169 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L++ E M G L + + RG + ++ + FLH + +RD K N+
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVKPENL 140
Query: 221 LLDS-EFNA--KLSDFGLAKAGPTGDRTHVSTQV-MGTRGYAAPEYLATGRLTAKCDVYS 276
L S E +A KL+DFG AK + T + Q T Y APE L + CD++S
Sbjct: 141 LYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 277 FGVVLLELLSG 287
GV++ LL G
Sbjct: 196 LGVIMYILLCG 206
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 17/203 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G FG V++ G A K + + E+ + L HP
Sbjct: 165 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEA 206
LV L D +++YE+M G L + + + ++ +GL +H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMH-- 272
Query: 207 EQQVIYRDFKASNILLDSEFNA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLA 264
E ++ D K NI+ ++ + KL DFGL V+T GT +AAPE
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 329
Query: 265 TGRLTAKCDVYSFGVVLLELLSG 287
+ D++S GV+ LLSG
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
LV+E M GS+ +H+ +R R V A L FLH + + +RD K NIL
Sbjct: 88 LVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLH--NKGIAHRDLKPENIL 143
Query: 222 LDSEFN---AKLSDFGLAKA-GPTGDRTHVSTQVM----GTRGYAAPEYLATGRLTA--- 270
+ K+ DFGL GD + +ST + G+ Y APE + A
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 271 --KCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYLGDRRKLFRIMDIKLEGQY 328
+CD++S GV+L LLSG R G++ D + + LF + EG+Y
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPF-VGRCGSDCGW-DRGEACPACQNMLFESIQ---EGKY 258
Query: 329 --PQKGAYMVAILALQCISEAKVRPSMSEVLSALEQLPPPRDPASPSNSDP 377
P K ++ A IS+ VR + + +A P +P N+ P
Sbjct: 259 EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLP 309
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 13/208 (6%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHH 144
+IG+G F V + E + ++ V K ++ E + L H
Sbjct: 30 EVIGKGAFSVVRRCI----NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 145 PNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI--GAARGLSF 202
P++V+L+ +V+E+M L + +R ++ + L +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNA---KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
H+ +I+RD K N+LL S+ N+ KL DFG+A G+ V+ +GT + A
Sbjct: 146 CHD--NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGTPHFMA 201
Query: 260 PEYLATGRLTAKCDVYSFGVVLLELLSG 287
PE + DV+ GV+L LLSG
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
RGL ++H A +I+RD K SN+ ++ + ++ DFGLA+ T + TR Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWY 194
Query: 258 AAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
APE + D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L++ E M G L + + RG + ++ + FLH + +RD K N+
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVKPENL 159
Query: 221 LLDS-EFNA--KLSDFGLAKAGPTGDRTHVSTQV-MGTRGYAAPEYLATGRLTAKCDVYS 276
L S E +A KL+DFG AK + T + Q T Y APE L + CD++S
Sbjct: 160 LYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 277 FGVVLLELLSG 287
GV++ LL G
Sbjct: 215 LGVIMYILLCG 225
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 47/223 (21%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL--SEVNYLGQLH 143
IG+G FG V++G W E +AVK + + W +E+ L
Sbjct: 14 IGKGRFGEVWRGKWRGEE------------VAVKIFSS---REERSWFREAEIYQTVMLR 58
Query: 144 HPNLVKLIGFCLDGENR--------LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIG 195
H N++ I +N+ LV +Y GSL ++L R + IK+A+
Sbjct: 59 HENILGFIA----ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALS 111
Query: 196 AARGLSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLA-KAGPTGDRTHVS 248
A GL+ LH + + + +RD K+ NIL+ ++D GLA + D ++
Sbjct: 112 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 171
Query: 249 -TQVMGTRGYAAPEYLATG------RLTAKCDVYSFGVVLLEL 284
+GT+ Y APE L + D+Y+ G+V E+
Sbjct: 172 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Query: 78 TRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVN 137
T ++ +G+G F V + + A + M+I KKL + H++ E
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCV----KVLAGQEYAAMIINTKKLSA---RDHQKLEREAR 62
Query: 138 YLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGA 196
L HPN+V+L + + L+++ + G L E+ + R + I+ + A
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 197 ARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMG 253
LH + V++R+ K N+LL S+ KL+DFGLA + G
Sbjct: 123 V-----LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAG 175
Query: 254 TRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
T GY +PE L D+++ GV+L LL G
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 198 RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGY 257
RGL ++H A +I+RD K SN+ ++ + ++ DFGLA+ T + TR Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWY 194
Query: 258 AAPEYLATG-RLTAKCDVYSFGVVLLELLSGR 288
APE + D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 43/308 (13%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVG-------MVIAVKKLK 122
F +++N F + +G+G F ++KG R VG + +K L
Sbjct: 1 VFHKIRNEDLIF--NESLGQGTFTKIFKG---------VRREVGDYGQLHETEVLLKVLD 49
Query: 123 PEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGAR 182
+ + + + +L H +LV G C G+ +LV E++ GSL+ +L ++
Sbjct: 50 KAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKN 108
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAK-AGPT 241
+ +++VA A + FL E +I+ + A NILL E + K + K + P
Sbjct: 109 CINILWKLEVAKQLAWAMHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166
Query: 242 GDRTHVSTQVMGTR-GYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAVDKTRVGAE 299
T + ++ R + PE + + L D +SFG L E+ SG
Sbjct: 167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG----------- 215
Query: 300 QNLVDWAKPYLGDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEVLS 358
D L +RKL D Q P A +A L C+ E RPS ++
Sbjct: 216 ----DKPLSALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
Query: 359 ALEQLPPP 366
L L P
Sbjct: 269 DLNSLFTP 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 124 --LNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 43/239 (17%)
Query: 75 KNATRNFRPDSLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWL 133
+ R +G+G +G V++G W E+ +AVK + K W
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 77
Query: 134 SEVNYLG--QLHHPNLVKLIGFCLDGENR----LLVYEYMPKGSLENHLFRRGARPLPWT 187
E L H N++ I + + L+ Y GSL ++L +
Sbjct: 78 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-C 136
Query: 188 LRIKVAIGAARGLSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLA--KAG 239
LRI ++I A GL+ LH + + + +RD K+ NIL+ ++D GLA +
Sbjct: 137 LRIVLSI--ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
Query: 240 PTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKC-------DVYSFGVVLLELLSGRRAV 291
T + +GT+ Y APE L + C D+++FG+VL E+ RR V
Sbjct: 195 STNQLDVGNNPRVGTKRYMAPEVLDE-TIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 250
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 31/186 (16%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA-RPLPWTLRIKVA 193
EV+ L Q+ HPN++ L + + +L+ E + G L + L ++ + T IK
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVST 249
+ G+++LH +++ + D K NI LLD + KL DFGLA G
Sbjct: 125 LD---GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---K 176
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPY 309
+ GT + APE + L + D++S GV+ LLSG A P+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 218
Query: 310 LGDRRK 315
LGD ++
Sbjct: 219 LGDTKQ 224
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG--QLH 143
+G+G +G V++G W E+ +AVK + K W E L
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETELYNTVMLR 60
Query: 144 HPNLVKLIGFCLDGENR----LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
H N++ I + + L+ Y GSL ++L L +++ + A G
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASG 117
Query: 200 LSFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLA--KAGPTGDRTHVSTQV 251
L+ LH + + + +RD K+ NIL+ ++D GLA + T +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 252 MGTRGYAAPEYLATGRLTAKC-------DVYSFGVVLLELLSGRRAV 291
+GT+ Y APE L + C D+++FG+VL E+ RR V
Sbjct: 178 VGTKRYMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
EV+ L ++ HPN++ L + + +L+ E + G L + L + + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 195 GAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQ 250
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 251 VMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPYL 310
+ GT + APE + L + D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 311 GDRRK 315
GD ++
Sbjct: 219 GDTKQ 223
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 70 TFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQG 128
TF+ LK +N +P IG G G V + + LE +A+KKL +P Q
Sbjct: 19 TFTVLKR-YQNLKP---IGSGAQGIVCAAY--DAILERN-------VAIKKLSRPFQNQT 65
Query: 129 H-KEWLSEVNYLGQLHHPNLVKLIGFCL------DGENRLLVYEYMPKGSLENHLFRRGA 181
H K E+ + ++H N++ L+ + ++ +V E M +
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 182 RPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+ + L + G+ LH A +I+RD K SNI++ S+ K+ DFGLA+
Sbjct: 126 ERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-- 176
Query: 242 GDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS------GRRAVDKTR 295
G + +V+ TR Y APE + D++S G ++ E++ GR +D+
Sbjct: 177 GTSFMMEPEVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 235
Query: 296 VGAEQ 300
EQ
Sbjct: 236 KVIEQ 240
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 146
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK + + T+ T Y APE L + CD++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSL---TEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 204 GVIMYILLCG 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 99/249 (39%), Gaps = 58/249 (23%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G +G V + I+ T + ++++ P+ + K +EV + +LHHPN
Sbjct: 34 IGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVERIK---TEVRLMKKLHHPN 89
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLEN-------------------------------- 174
+ +L D + LV E G L +
Sbjct: 90 IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 175 -----HLFRRGARPLPWTLRIKVAIGAAR----GLSFLHEAEQQVIYRDFKASNILLDSE 225
H FR L + R K+ R L +LH Q + +RD K N L +
Sbjct: 150 INGSIHGFRES---LDFVQREKLISNIMRQIFSALHYLHN--QGICHRDIKPENFLFSTN 204
Query: 226 --FNAKLSDFGLAKAG---PTGDRTHVSTQVMGTRGYAAPEYLATGRLTA--KCDVYSFG 278
F KL DFGL+K G+ ++T+ GT + APE L T + KCD +S G
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 279 VVLLELLSG 287
V+L LL G
Sbjct: 264 VLLHLLLMG 272
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 130 KEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR 189
K L E+ L HHPN++ L + E M K L L R + R
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEE-----PAMHKLYLVTELMRTDLAQVIHDQR 128
Query: 190 IKVA--------IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
I ++ GL LHEA V++RD NILL + + DF LA+
Sbjct: 129 IVISPQHIQYFMYHILLGLHVLHEA--GVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 242 -GDRTHVSTQVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
++TH T R Y APE + + T D++S G V+ E+ + R+A+
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKAL 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 130 KEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLR 189
K L E+ L HHPN++ L + E M K L L R + R
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEE-----PAMHKLYLVTELMRTDLAQVIHDQR 128
Query: 190 IKVA--------IGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
I ++ GL LHEA V++RD NILL + + DF LA+
Sbjct: 129 IVISPQHIQYFMYHILLGLHVLHEA--GVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 242 -GDRTHVSTQVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAV 291
++TH T R Y APE + + T D++S G V+ E+ + R+A+
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKAL 233
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEW 132
E++ +F +IG G FG V + A + +K+ + F+ ++
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 127
Query: 133 L--SEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTL- 188
L + ++ LH + EN L LV +Y G L L + LP +
Sbjct: 128 LVNGDCQWITALH---------YAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMA 177
Query: 189 -----RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
+ +AI + L ++H RD K N+LLD + +L+DFG + D
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDD 228
Query: 244 RTHVSTQVMGTRGYAAPEYL-----ATGRLTAKCDVYSFGVVLLELLSGR 288
T S+ +GT Y +PE L G+ +CD +S GV + E+L G
Sbjct: 229 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 131/315 (41%), Gaps = 60/315 (19%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS---EV 136
+R L+G+GGFG V+ G L+ A + + + + G+ + ++ EV
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVA------IKVIPRNRVLGWSPLSDSVTCPLEV 85
Query: 137 NYLGQLH----HPNLVKLIGFCLDGENRLLVYEY-MPKGSLENHLFRRGARPL---PWTL 188
L ++ HP +++L+ + E +LV E +P L +++ +G PL P
Sbjct: 86 ALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRC 143
Query: 189 RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN-AKLSDFGLAKAGPTGDRTHV 247
+ A + H + V++RD K NIL+D AKL DFG +G H
Sbjct: 144 FFGQVVAAIQ-----HCHSRGVVHRDIKDENILIDLRRGCAKLIDFG------SGALLHD 192
Query: 248 S--TQVMGTRGYAAPEYLATGRLTA-KCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVD 304
T GTR Y+ PE+++ + A V+S G++L +++ G ++ + E L
Sbjct: 193 EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL-- 250
Query: 305 WAKPYLGDRRKLFRIMDIKLEGQYPQKGAYMVAILALQCIS-EAKVRPSMSEV-LSALEQ 362
+P + L +C++ + RPS+ E+ L Q
Sbjct: 251 ----------------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288
Query: 363 LPPPRDPASPSNSDP 377
P P +PS P
Sbjct: 289 TPAEDVPLNPSKGGP 303
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G F V + + A + +I KKL + H++ E L HPN
Sbjct: 30 LGKGAFSVVRRCV----KVLAGQEYAAKIINTKKLSA---RDHQKLEREARICRLLKHPN 82
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+V+L + + L+++ + G L E+ + R + I+ + A LH
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----LHC 137
Query: 206 AEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
+ V++RD K N+LL S+ KL+DFGLA + GT GY +PE
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEV 195
Query: 263 LATGRLTAKCDVYSFGVVLLELLSG 287
L D+++ GV+L LL G
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 73 ELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEW 132
E++ +F +IG G FG V + A + +K+ + F+ ++
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 143
Query: 133 L--SEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLPWTL- 188
L + ++ LH + EN L LV +Y G L L + LP +
Sbjct: 144 LVNGDCQWITALH---------YAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMA 193
Query: 189 -----RIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGD 243
+ +AI + L ++H RD K N+LLD + +L+DFG + D
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDD 244
Query: 244 RTHVSTQVMGTRGYAAPEYL-----ATGRLTAKCDVYSFGVVLLELLSGR 288
T S+ +GT Y +PE L G+ +CD +S GV + E+L G
Sbjct: 245 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 154
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 155 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 212 GVIMYILLCG 221
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 192
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 250 GVIMYILLCG 259
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 198
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 199 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 256 GVIMYILLCG 265
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGV--GMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHH 144
I GG G++Y +D + RP V G+V + +++L+EV H
Sbjct: 88 IAHGGLGWIYLA-LDRNV--NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV------H 138
Query: 145 PNLVKLIGFCLDGENR-----LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
P++V++ F + +V EY+ SL+ R + LP I +
Sbjct: 139 PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK----RSKGQKLPVAEAIAYLLEILPA 194
Query: 200 LSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAA 259
LS+LH ++Y D K NI+L +E KL D G R + + GT G+ A
Sbjct: 195 LSYLHSI--GLVYNDLKPENIML-TEEQLKLIDLGAVS------RINSFGYLYGTPGFQA 245
Query: 260 PEYLATGRLTAKCDVYSFGVVLLEL 284
PE + TG T D+Y+ G L L
Sbjct: 246 PEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 30/211 (14%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQGH---KEWLSEVNYLGQL 142
+G G +G V ID+ + G +A+KKL +P FQ K E+ L +
Sbjct: 50 VGSGAYGSVCSA-IDKRS--------GEKVAIKKLSRP--FQSEIFAKRAYRELLLLKHM 98
Query: 143 HHPNLVKLIGFCLDGENRLLVYE-YMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLS 201
H N++ L+ + Y+ Y+ ++ L + + +GL
Sbjct: 99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLK 158
Query: 202 FLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---TRGYA 258
++H A V++RD K N+ ++ + K+ DFGLA+ H ++ G TR Y
Sbjct: 159 YIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTRWYR 208
Query: 259 APE-YLATGRLTAKCDVYSFGVVLLELLSGR 288
APE L+ D++S G ++ E+L+G+
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 153
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 154 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 211 GVIMYILLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 152
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 153 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 210 GVIMYILLCG 219
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 86/212 (40%), Gaps = 36/212 (16%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG G FG V + D+ T E ++AVK ++ G + E+ L HPN
Sbjct: 28 IGSGNFG-VARLMRDKLTKE--------LVAVKYIE-RGAAIDENVQREIINHRSLRHPN 77
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAAR-------- 198
+V+ L + ++ EY G L + G + + AR
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAG----------RFSEDEARFFFQQLLS 127
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTRG 256
G+S+ H Q+ +RD K N LLD K+ DFG +K+ + +GT
Sbjct: 128 GVSYCH--SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPA 182
Query: 257 YAAPEYLATGRLTAK-CDVYSFGVVLLELLSG 287
Y APE L K DV+S GV L +L G
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 146
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 204 GVIMYILLCG 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 147
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 148 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 205 GVIMYILLCG 214
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 26/210 (12%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
++ IG G +G V A + G + A KK+ + + E+ + L
Sbjct: 14 ENTIGRGSWGEVKI---------AVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
HPN+++L D + LV E G L E + +R R +K + A +++
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA---VAY 121
Query: 203 LHEAEQQVIYRDFKASNILL--DS-EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGY 257
H+ V +RD K N L DS + KL DFGLA G RT V GT Y
Sbjct: 122 CHKL--NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-----GTPYY 174
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+P+ L G +CD +S GV++ LL G
Sbjct: 175 VSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 54/223 (24%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKL-KPEGFQGH---KEWLSEVNYLGQL 142
+G G +G V ID+ + G +A+KKL +P FQ K E+ L +
Sbjct: 32 VGSGAYGSVCSA-IDKRS--------GEKVAIKKLSRP--FQSEIFAKRAYRELLLLKHM 80
Query: 143 HHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKV---------- 192
H N++ L+ + P SL N P T K+
Sbjct: 81 QHENVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKI 128
Query: 193 ---AIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
+GL ++H A V++RD K N+ ++ + K+ DFGLA+ H
Sbjct: 129 QYLVYQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADA 178
Query: 250 QVMG---TRGYAAPE-YLATGRLTAKCDVYSFGVVLLELLSGR 288
++ G TR Y APE L+ D++S G ++ E+L+G+
Sbjct: 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 148
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 86/210 (40%), Gaps = 32/210 (15%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG G FG V + D+ E ++AVK ++ G + + E+ L HPN
Sbjct: 27 IGAGNFG-VARLMRDKQANE--------LVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG------ARPLPWTLRIKVAIGAARGL 200
+V+ L + +V EY G L + G AR L G+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--------ISGV 128
Query: 201 SFLHEAEQQVIYRDFKASNILLDSE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
S+ H QV +RD K N LLD K++DFG +KA + +GT Y
Sbjct: 129 SYAH--AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYI 183
Query: 259 APEYLATGRLTAKC-DVYSFGVVLLELLSG 287
APE L K DV+S GV L +L G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 162
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 163 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 220 GVIMYILLCG 229
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 148
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 278 GVVLLELLSG 287
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 26/210 (12%)
Query: 84 DSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
++ IG G +G V A + G + A KK+ + + E+ + L
Sbjct: 31 ENTIGRGSWGEVKI---------AVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
HPN+++L D + LV E G L E + +R R +K + A +++
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA---VAY 138
Query: 203 LHEAEQQVIYRDFKASNILL--DS-EFNAKLSDFGLAKAGPTGD--RTHVSTQVMGTRGY 257
H+ V +RD K N L DS + KL DFGLA G RT V GT Y
Sbjct: 139 CHKL--NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-----GTPYY 191
Query: 258 AAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+P+ L G +CD +S GV++ LL G
Sbjct: 192 VSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 201 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 258
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 17/139 (12%)
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
LV+E M GS+ +H+ +R R V A L FLH + + +RD K NIL
Sbjct: 88 LVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLH--NKGIAHRDLKPENIL 143
Query: 222 LDSEFN---AKLSDFGLAKA-GPTGDRTHVSTQVM----GTRGYAAPEYLATGRLTA--- 270
+ K+ DF L GD + +ST + G+ Y APE + A
Sbjct: 144 CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 271 --KCDVYSFGVVLLELLSG 287
+CD++S GV+L LLSG
Sbjct: 204 DKRCDLWSLGVILYILLSG 222
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 203 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 260
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 183 PLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTG 242
P+ I + ARG+ FL + ++ I+RD A NILL K+ DFGLA+
Sbjct: 195 PITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 243 DRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + + K DV+S+GV+L E+ S
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQG--HKEWLSEVNYLGQL-H 143
+G G FG V + + +AVK LK EG +K ++E+ L + H
Sbjct: 35 LGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLK-EGATASEYKALMTELKILTHIGH 89
Query: 144 HPNLVKLIGFCL-DGENRLLVYEYMPKGSLENHL 176
H N+V L+G C G +++ EY G+L N+L
Sbjct: 90 HLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 196 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 253
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 190 IKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVST 249
I + A+G+ FL A ++ I+RD A NILL + K+ DFGLA+
Sbjct: 194 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 251
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLS 286
+ APE + T + DV+SFGV+L E+ S
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 80 NFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPE-GFQGHKEWLSEVNY 138
+ P +G G +G V K H P G ++AVK+++ Q K L +++
Sbjct: 8 DLEPIMELGRGAYGVVEKM---RHV-----PS-GQIMAVKRIRATVNSQEQKRLLMDLDI 58
Query: 139 -LGQLHHPNLVKLIGFCLDGENRLLVYEYMPKG--SLENHLFRRGARPLPWTLRIKVAIG 195
+ + P V G + + E M + +G + +P + K+A+
Sbjct: 59 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG-QTIPEDILGKIAVS 117
Query: 196 AARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTR 255
+ L LH ++ VI+RD K SN+L+++ K+ DFG+ +G D G +
Sbjct: 118 IVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDDVAKDIDA-GCK 173
Query: 256 GYAAPE----YLATGRLTAKCDVYSFGVVLLEL 284
Y APE L + K D++S G+ ++EL
Sbjct: 174 PYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 86/210 (40%), Gaps = 32/210 (15%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG G FG V + D+ + E ++AVK ++ G + + E+ L HPN
Sbjct: 26 IGSGNFG-VARLMRDKQSNE--------LVAVKYIE-RGEKIDENVKREIINHRSLRHPN 75
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG------ARPLPWTLRIKVAIGAARGL 200
+V+ L + +V EY G L + G AR L G+
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--------ISGV 127
Query: 201 SFLHEAEQQVIYRDFKASNILLDSE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
S+ H QV +RD K N LLD K+ DFG +K+ + +GT Y
Sbjct: 128 SYCH--AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYI 182
Query: 259 APEYLATGRLTAKC-DVYSFGVVLLELLSG 287
APE L K DV+S GV L +L G
Sbjct: 183 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 162 LVYEYMPKGSLENHL--FRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASN 219
++ EY+P +L L F R R +P L R + F+H + +RD K N
Sbjct: 115 VIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL--GICHRDIKPQN 171
Query: 220 ILLDSEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPE-YLATGRLTAKCDVYSF 277
+L++S+ N KL DFG AK + S + +R Y APE L T D++S
Sbjct: 172 LLVNSKDNTLKLCDFGSAKKLIPSEP---SVAXICSRFYRAPELMLGATEYTPSIDLWSI 228
Query: 278 GVVLLELLSGR 288
G V EL+ G+
Sbjct: 229 GCVFGELILGK 239
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 129 HKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSL---ENHLF---RRGAR 182
+ ++ +E+ + + + + G + + ++YEYM S+ + + F +
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 183 PLPWTLRIKVAIGAA-RGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPT 241
+P + IK I + S++H E+ + +RD K SNIL+D KLSDFG ++
Sbjct: 147 FIPIQV-IKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFGESEY--- 201
Query: 242 GDRTHVSTQVMGTRG---YAAPEYLA--TGRLTAKCDVYSFGVVL 281
V ++ G+RG + PE+ + + AK D++S G+ L
Sbjct: 202 ----MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 85/210 (40%), Gaps = 32/210 (15%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG G FG V + D+ + E ++AVK ++ G + E+ L HPN
Sbjct: 27 IGSGNFG-VARLMRDKQSNE--------LVAVKYIE-RGEKIAANVKREIINHRSLRHPN 76
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG------ARPLPWTLRIKVAIGAARGL 200
+V+ L + +V EY G L + G AR L G+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--------ISGV 128
Query: 201 SFLHEAEQQVIYRDFKASNILLDSE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
S+ H QV +RD K N LLD K+ DFG +K+ + +GT Y
Sbjct: 129 SYCH--AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYI 183
Query: 259 APEYLATGRLTAKC-DVYSFGVVLLELLSG 287
APE L K DV+S GV L +L G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 18/231 (7%)
Query: 61 LSCPNLKAFTFSELKNATRNFRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKK 120
L NL + T +++ +G+G F V + T E A +I KK
Sbjct: 13 LGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYA----AKIINTKK 68
Query: 121 LKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRR 179
L + H++ E L HPN+V+L + LV++ + G L E+ + R
Sbjct: 69 LSA---RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE 125
Query: 180 GARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFN---AKLSDFGLA 236
+ I + + H + +++RD K N+LL S+ KL+DFGLA
Sbjct: 126 YYSEADASHCIHQILESVN-----HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
Query: 237 KAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+ GT GY +PE L D+++ GV+L LL G
Sbjct: 181 IEVQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
L+V E + G L + + RG + ++ + +LH + +RD K N+
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI--NIAHRDVKPENL 192
Query: 221 LLDSEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
L S+ NA KL+DFG AK T ++T T Y APE L + CD +S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 278 GVVLLELLSG 287
GV+ LL G
Sbjct: 250 GVIXYILLCG 259
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHH 144
L+GEG +G V K +D TL R + + P G K+ E+ L +L H
Sbjct: 11 DLLGEGSYGKV-KEVLDSETL-CRRAVKILKKKKLRRIPNGEANVKK---EIQLLRRLRH 65
Query: 145 PNLVKLIGFCLDGENR--LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSF 202
N+++L+ + E + +V EY G ++ L + P GL +
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124
Query: 203 LHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGP--TGDRTHVSTQVMGTRGYAAP 260
LH Q ++++D K N+LL + K+S G+A+A D T ++Q G+ + P
Sbjct: 125 LHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ--GSPAFQPP 180
Query: 261 EYLATGRLT---AKCDVYSFGVVLLELLSG 287
E +A G T K D++S GV L + +G
Sbjct: 181 E-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG+G F V + L +I KKL + H++ E L H N
Sbjct: 12 IGKGAFSVVRRCV----KLCTGHEYAAKIINTKKLSA---RDHQKLEREARICRLLKHSN 64
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+V+L + LV++ + G L E+ + R + I+ + A LH
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----LHC 119
Query: 206 AEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
+ V++RD K N+LL S+ KL+DFGLA GD+ GT GY +PE
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEV 177
Query: 263 LATGRLTAKCDVYSFGVVLLELLSG 287
L D+++ GV+L LL G
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 39/253 (15%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G G +G+VY + A+K+++ G E+ L +L HPN
Sbjct: 29 VGRGTYGHVY-------KAKRKDGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPN 79
Query: 147 LVKLIGFCLDGENR--LLVYEYMPKGSLENHLFRRGARP------LPWTLRIKVAIGAAR 198
++ L L +R L+++Y F R ++ LP + +
Sbjct: 80 VISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 139
Query: 199 GLSFLHEAEQQVIYRDFKASNILLDSE----FNAKLSDFGLAK-----AGPTGDRTHVST 249
G+ +LH V++RD K +NIL+ E K++D G A+ P D
Sbjct: 140 GIHYLH--ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL----D 193
Query: 250 QVMGTRGYAAPEYLATGR-LTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKP 308
V+ T Y APE L R T D+++ G + ELL+ Q + + P
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI-----FHCRQEDIKTSNP 248
Query: 309 YLGDR-RKLFRIM 320
Y D+ ++F +M
Sbjct: 249 YHHDQLDRIFNVM 261
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA-RPLPWTLRIKVA 193
EV+ L Q+ H N++ L + + +L+ E + G L + L ++ + T IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVST 249
+ G+++LH +++ + D K NI LLD + KL DFGLA G
Sbjct: 125 LD---GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---K 176
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPY 309
+ GT + APE + L + D++S GV+ LLSG A P+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 218
Query: 310 LGDRRK 315
LGD ++
Sbjct: 219 LGDTKQ 224
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA-RPLPWTLRIKVA 193
EV+ L Q+ H N++ L + + +L+ E + G L + L ++ + T IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVST 249
+ G+++LH +++ + D K NI LLD + KL DFGLA G
Sbjct: 125 LD---GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---K 176
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPY 309
+ GT + APE + L + D++S GV+ LLSG A P+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 218
Query: 310 LGDRRK 315
LGD ++
Sbjct: 219 LGDTKQ 224
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 161 LLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNI 220
+L+ EY G + + A + I++ G+ +LH+ +++ D K NI
Sbjct: 105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ--NNIVHLDLKPQNI 162
Query: 221 LLDSEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSF 277
LL S + + K+ DFG+++ G + ++MGT Y APE L +T D+++
Sbjct: 163 LLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGTPEYLAPEILNYDPITTATDMWNI 219
Query: 278 GVVLLELLS 286
G++ LL+
Sbjct: 220 GIIAYMLLT 228
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA-RPLPWTLRIKVA 193
EV+ L Q+ H N++ L + + +L+ E + G L + L ++ + T IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVST 249
+ G+++LH +++ + D K NI LLD + KL DFGLA G
Sbjct: 125 LD---GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---K 176
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPY 309
+ GT + APE + L + D++S GV+ LLSG A P+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 218
Query: 310 LGDRRK 315
LGD ++
Sbjct: 219 LGDTKQ 224
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA-RPLPWTLRIKVA 193
EV+ L Q+ H N++ L + + +L+ E + G L + L ++ + T IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVST 249
+ G+++LH +++ + D K NI LLD + KL DFGLA G
Sbjct: 125 LD---GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---K 176
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPY 309
+ GT + APE + L + D++S GV+ LLSG A P+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 218
Query: 310 LGDRRK 315
LGD ++
Sbjct: 219 LGDTKQ 224
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 27/145 (18%)
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
+ +E + K + E L +P P +A L FLHE Q+ + D K NIL
Sbjct: 99 IAFELLGKNTFE-FLKENNFQPYPLPHVRHMAYQLCHALRFLHE--NQLTHTDLKPENIL 155
Query: 222 -LDSEFNA------------------KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
++SEF +++DFG A T D H +T ++ TR Y PE
Sbjct: 156 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA----TFDHEHHTT-IVATRHYRPPEV 210
Query: 263 LATGRLTAKCDVYSFGVVLLELLSG 287
+ CDV+S G +L E G
Sbjct: 211 ILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGA-RPLPWTLRIKVA 193
EV+ L Q+ H N++ L + + +L+ E + G L + L ++ + T IK
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNI-LLDSEF---NAKLSDFGLAKAGPTGDRTHVST 249
+ G+++LH +++ + D K NI LLD + KL DFGLA G
Sbjct: 125 LD---GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---K 176
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSGRRAVDKTRVGAEQNLVDWAKPY 309
+ GT + APE + L + D++S GV+ LLSG A P+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPF 218
Query: 310 LGDRRK 315
LGD ++
Sbjct: 219 LGDTKQ 224
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 27/145 (18%)
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
+ +E + K + E L +P P +A L FLHE Q+ + D K NIL
Sbjct: 108 IAFELLGKNTFE-FLKENNFQPYPLPHVRHMAYQLCHALRFLHE--NQLTHTDLKPENIL 164
Query: 222 -LDSEFNA------------------KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
++SEF +++DFG A T D H +T ++ TR Y PE
Sbjct: 165 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA----TFDHEHHTT-IVATRHYRPPEV 219
Query: 263 LATGRLTAKCDVYSFGVVLLELLSG 287
+ CDV+S G +L E G
Sbjct: 220 ILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 43/227 (18%)
Query: 87 IGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKL-KPEGFQGHKEWLSEVNYLGQLHH 144
IG+G +G V+ G W E +AVK E +E +E+ + H
Sbjct: 45 IGKGRYGEVWMGKWRGEK------------VAVKVFFTTEEASWFRE--TEIYQTVLMRH 90
Query: 145 PNLVKLIGFCLDGENRL----LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
N++ I + G L+ +Y GSL ++L + L +K+A + GL
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGL 147
Query: 201 SFLH------EAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHV----STQ 250
LH + + + +RD K+ NIL+ ++D GLA D V +T+
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTR 206
Query: 251 VMGTRGYAAPEYLATG------RLTAKCDVYSFGVVLLELLSGRRAV 291
V GT+ Y PE L + D+YSFG++L E+ RR V
Sbjct: 207 V-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCV 250
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 27/145 (18%)
Query: 162 LVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNIL 221
+ +E + K + E L +P P +A L FLHE Q+ + D K NIL
Sbjct: 131 IAFELLGKNTFE-FLKENNFQPYPLPHVRHMAYQLCHALRFLHE--NQLTHTDLKPENIL 187
Query: 222 -LDSEFNA------------------KLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
++SEF +++DFG A T D H +T ++ TR Y PE
Sbjct: 188 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA----TFDHEHHTT-IVATRHYRPPEV 242
Query: 263 LATGRLTAKCDVYSFGVVLLELLSG 287
+ CDV+S G +L E G
Sbjct: 243 ILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 42/193 (21%)
Query: 144 HPNLVKLIGFCLDGENRLL----------VYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
HPN+++ +C + +R L + + + ++ + + P +L ++A
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLD--SEFNAK-----------LSDFGLAK--- 237
G A H ++I+RD K NIL+ S F A +SDFGL K
Sbjct: 126 SGVA------HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 238 AGPTGDRTHVSTQVMGTRGYAAPEYLATG-------RLTAKCDVYSFGVVLLELLSGRRA 290
+G + RT+++ GT G+ APE L RLT D++S G V +LS +
Sbjct: 180 SGQSSFRTNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
Query: 291 VDKTRVGAEQNLV 303
+ E N++
Sbjct: 239 PFGDKYSRESNII 251
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 85/210 (40%), Gaps = 32/210 (15%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG G FG V + D+ + E ++AVK ++ G + + E+ L HPN
Sbjct: 27 IGSGNFG-VARLMRDKQSNE--------LVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG------ARPLPWTLRIKVAIGAARGL 200
+V+ L + +V EY G L + G AR L G+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--------ISGV 128
Query: 201 SFLHEAEQQVIYRDFKASNILLDSE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
S+ H QV +RD K N LLD K+ FG +K+ + +GT Y
Sbjct: 129 SYCH--AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKDTVGTPAYI 183
Query: 259 APEYLATGRLTAKC-DVYSFGVVLLELLSG 287
APE L K DV+S GV L +L G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 85/210 (40%), Gaps = 32/210 (15%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
IG G FG V + D+ + E ++AVK ++ G + + E+ L HPN
Sbjct: 27 IGSGNFG-VARLMRDKQSNE--------LVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRG------ARPLPWTLRIKVAIGAARGL 200
+V+ L + +V EY G L + G AR L G+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--------ISGV 128
Query: 201 SFLHEAEQQVIYRDFKASNILLDSE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
S+ H QV +RD K N LLD K+ FG +K+ + +GT Y
Sbjct: 129 SYCH--AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKSTVGTPAYI 183
Query: 259 APEYLATGRLTAKC-DVYSFGVVLLELLSG 287
APE L K DV+S GV L +L G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 72/175 (41%), Gaps = 39/175 (22%)
Query: 128 GHKEWLSEVNYLGQLHHPNLVKLIGFCLDGENRL-LVYEYMPKGSLENHLFRRGARPLP- 185
G + W++ QLH F EN L LV EY G L L + G R +P
Sbjct: 118 GDRRWIT------QLH---------FAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPA 161
Query: 186 -----WTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGP 240
+ I +AI + L ++H RD K NILLD + +L+DFG +
Sbjct: 162 EMARFYLAEIVMAIDSVHRLGYVH--------RDIKPDNILLDRCGHIRLADFG-SCLKL 212
Query: 241 TGDRTHVSTQVMGTRGYAAPEYLATGRLTA-------KCDVYSFGVVLLELLSGR 288
D T S +GT Y +PE L +CD ++ GV E+ G+
Sbjct: 213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 12/209 (5%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
+ DSLIG+G FG V K + +E + +I KK Q L +N
Sbjct: 56 YEIDSLIGKGSFGQVVKAY---DRVEQEWVAIK-IIKNKKAFLNQAQIEVRLLELMNKHD 111
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+V L + + LV+E M +L + L R + L K A L
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 201 SFLHEAEQQVIYRDFKASNILLDS--EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
FL E +I+ D K NILL + K+ DFG + G R + Q + +R Y
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG--SSCQLGQRIY---QXIQSRFYR 225
Query: 259 APEYLATGRLTAKCDVYSFGVVLLELLSG 287
+PE L D++S G +L+E+ +G
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 53/251 (21%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS------EVNYL 139
L+G GGFG VY G R + +A+K ++ + E + EV L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 140 GQLH--HPNLVKLIGFCLDGENRLLVYEYM-PKGSLENHLFRRG------ARPLPWTLRI 190
++ +++L+ + ++ +L+ E M P L + + RG AR W +
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-- 123
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLD-SEFNAKLSDFGLAKAGPTGDRTHVST 249
+ A R H V++RD K NIL+D + KL DFG +G T V T
Sbjct: 124 ---LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYT 171
Query: 250 QVMGTRGYAAPEYLATGRLTAK-CDVYSFGVVLLELLSGR------------RAVDKTRV 296
GTR Y+ PE++ R + V+S G++L +++ G + + RV
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 231
Query: 297 GAE-QNLVDWA 306
+E Q+L+ W
Sbjct: 232 SSECQHLIRWC 242
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + L HP++V+L+ +V+E+M L + +R ++ +
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 195 --GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNA---KLSDFGLAKAGPTGDRTHVST 249
L + H+ +I+RD K +LL S+ N+ KL FG+A G+ V+
Sbjct: 138 MRQILEALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAG 193
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+GT + APE + DV+ GV+L LLSG
Sbjct: 194 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 38/189 (20%)
Query: 144 HPNLVKLIGFCLDGENRLL----------VYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
HPN+++ +C + +R L + + + ++ + + P +L ++A
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLD--SEFNAK-----------LSDFGLAKAGP 240
G A H ++I+RD K NIL+ S F A +SDFGL K
Sbjct: 144 SGVA------HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 241 TGD---RTHVSTQVMGTRGYAAPEYLATG---RLTAKCDVYSFGVVLLELLSGRRAVDKT 294
+G R +++ GT G+ APE L RLT D++S G V +LS +
Sbjct: 198 SGQXXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 295 RVGAEQNLV 303
+ E N++
Sbjct: 257 KYSRESNII 265
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 12/209 (5%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
+ DSLIG+G FG V K + +E + +I KK Q L +N
Sbjct: 56 YEIDSLIGKGSFGQVVKAY---DRVEQEWVAIK-IIKNKKAFLNQAQIEVRLLELMNKHD 111
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+V L + + LV+E M +L + L R + L K A L
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 201 SFLHEAEQQVIYRDFKASNILLDS--EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
FL E +I+ D K NILL + K+ DFG + G R + Q + +R Y
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIY---QXIQSRFYR 225
Query: 259 APEYLATGRLTAKCDVYSFGVVLLELLSG 287
+PE L D++S G +L+E+ +G
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 135 EVNYLGQLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAI 194
E + L HP++V+L+ +V+E+M L + +R ++ +
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 195 --GAARGLSFLHEAEQQVIYRDFKASNILLDSEFNA---KLSDFGLAKAGPTGDRTHVST 249
L + H+ +I+RD K +LL S+ N+ KL FG+A G+ V+
Sbjct: 136 MRQILEALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAG 191
Query: 250 QVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
+GT + APE + DV+ GV+L LLSG
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 38/189 (20%)
Query: 144 HPNLVKLIGFCLDGENRLL----------VYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
HPN+++ +C + +R L + + + ++ + + P +L ++A
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLD--SEFNAK-----------LSDFGLAKAGP 240
G A H ++I+RD K NIL+ S F A +SDFGL K
Sbjct: 144 SGVA------HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 241 TGD---RTHVSTQVMGTRGYAAPEYLATG---RLTAKCDVYSFGVVLLELLSGRRAVDKT 294
+G R +++ GT G+ APE L RLT D++S G V +LS +
Sbjct: 198 SGQXXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 295 RVGAEQNLV 303
+ E N++
Sbjct: 257 KYSRESNII 265
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 12/209 (5%)
Query: 81 FRPDSLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLG 140
+ DSLIG+G FG V K + +E + +I KK Q L +N
Sbjct: 37 YEIDSLIGKGSFGQVVKAY---DRVEQEWVAIK-IIKNKKAFLNQAQIEVRLLELMNKHD 92
Query: 141 QLHHPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGL 200
+V L + + LV+E M +L + L R + L K A L
Sbjct: 93 TEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 201 SFLHEAEQQVIYRDFKASNILLDS--EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTRGYA 258
FL E +I+ D K NILL + K+ DFG + G R + Q + +R Y
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIY---QXIQSRFYR 206
Query: 259 APEYLATGRLTAKCDVYSFGVVLLELLSG 287
+PE L D++S G +L+E+ +G
Sbjct: 207 SPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G F V + + + +I KKL + H++ E L HPN
Sbjct: 12 LGKGAFSVVRRCM----KIPTGQEYAAKIINTKKLSA---RDHQKLEREARICRLLKHPN 64
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+V+L + LV++ + G L E+ + R + I+ + + H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN-----HC 119
Query: 206 AEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
+++RD K N+LL S+ KL+DFGLA GD+ GT GY +PE
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEV 177
Query: 263 LATGRLTAKCDVYSFGVVLLELLSG 287
L D+++ GV+L LL G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 181 ARPLPWTLRIKVAIGAARGLSFLHEAEQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGP 240
+ +P + K+A+ + L LH ++ VI+RD K SN+L+++ K DFG+ +G
Sbjct: 130 GQTIPEDILGKIAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKXCDFGI--SGY 186
Query: 241 TGDRTHVSTQVMGTRGYAAPE----YLATGRLTAKCDVYSFGVVLLEL 284
D G + Y APE L + K D++S G+ +EL
Sbjct: 187 LVDDVAKDIDA-GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 87 IGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPN 146
+G+G F V + + + +I KKL + H++ E L HPN
Sbjct: 12 LGKGAFSVVRRC----MKIPTGQEYAAKIINTKKLSA---RDHQKLEREARICRLLKHPN 64
Query: 147 LVKLIGFCLDGENRLLVYEYMPKGSL-ENHLFRRGARPLPWTLRIKVAIGAARGLSFLHE 205
+V+L + LV++ + G L E+ + R + I+ + + H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN-----HC 119
Query: 206 AEQQVIYRDFKASNILLDSEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTRGYAAPEY 262
+++RD K N+LL S+ KL+DFGLA GD+ GT GY +PE
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEV 177
Query: 263 LATGRLTAKCDVYSFGVVLLELLSG 287
L D+++ GV+L LL G
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 88/227 (38%), Gaps = 40/227 (17%)
Query: 85 SLIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH- 143
S +GEG FG V + +H AR + ++ V+K K E+N L +++
Sbjct: 39 STLGEGTFGRVVQ--CVDHRRGGARVALKIIKNVEKYKEAA-------RLEINVLEKINE 89
Query: 144 ----HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARG 199
+ NL + D + + + S + L P P +A +
Sbjct: 90 KDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQA 149
Query: 200 LSFLHEAEQQVIYRDFKASNILL---DSEFNAKLS----------------DFGLAKAGP 240
+ FLH+ ++ + D K NIL D E L DFG A
Sbjct: 150 VKFLHD--NKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA---- 203
Query: 241 TGDRTHVSTQVMGTRGYAAPEYLATGRLTAKCDVYSFGVVLLELLSG 287
T D H ST ++ TR Y APE + + CDV+S G ++ E G
Sbjct: 204 TFDHEHHST-IVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 34/216 (15%)
Query: 85 SLIGEGGFGYVYKG-WIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLSEVNYLGQLH 143
LIG+G FG VY G W H A R +I +++ + + K EV Q
Sbjct: 39 ELIGKGRFGQVYHGRW---HGEVAIR-----LIDIERDNEDQLKAFKR---EVMAYRQTR 87
Query: 144 HPNLVKLIGFCLDGENRLLVYEYMPKGSLENHLFRRGARPLPWTLRIKVAIGAARGLSFL 203
H N+V +G C+ + L + + KG + R L ++A +G+ +L
Sbjct: 88 HENVVLFMGACMSPPH-LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 204 HEAEQQVIYRDFKASNILLDSEFNAKLSDFGL------AKAGPTGDRTHVSTQVMGTRGY 257
H + ++++D K+ N+ D+ ++DFGL +AG D+ + G +
Sbjct: 147 H--AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCH 200
Query: 258 AAPEYLATGR---------LTAKCDVYSFGVVLLEL 284
APE + + DV++ G + EL
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 42/193 (21%)
Query: 144 HPNLVKLIGFCLDGENRLL----------VYEYMPKGSLENHLFRRGARPLPWTLRIKVA 193
HPN+++ +C + +R L + + + ++ + + P +L ++A
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 194 IGAARGLSFLHEAEQQVIYRDFKASNILLD--SEFNAK-----------LSDFGLAKAGP 240
G A H ++I+RD K NIL+ S F A +SDFGL K
Sbjct: 126 SGVA------HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 241 TGD---RTHVSTQVMGTRGYAAPEYLATG-------RLTAKCDVYSFGVVLLELLSGRRA 290
+G R +++ GT G+ APE L RLT D++S G V +LS +
Sbjct: 180 SGQXXFRXNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
Query: 291 VDKTRVGAEQNLV 303
+ E N++
Sbjct: 239 PFGDKYSRESNII 251
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 53/251 (21%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS------EVNYL 139
L+G GGFG VY G R + +A+K ++ + E + EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 140 GQLH--HPNLVKLIGFCLDGENRLLVYEY-MPKGSLENHLFRRGA------RPLPWTLRI 190
++ +++L+ + ++ +L+ E P L + + RGA R W +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-- 151
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLD-SEFNAKLSDFGLAKAGPTGDRTHVST 249
+ A R H V++RD K NIL+D + KL DFG +G T V T
Sbjct: 152 ---LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYT 199
Query: 250 QVMGTRGYAAPEYLATGRLTAK-CDVYSFGVVLLELLSGR------------RAVDKTRV 296
GTR Y+ PE++ R + V+S G++L +++ G + + RV
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 259
Query: 297 GAE-QNLVDWA 306
+E Q+L+ W
Sbjct: 260 SSECQHLIRWC 270
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 53/251 (21%)
Query: 86 LIGEGGFGYVYKGWIDEHTLEAARPGVGMVIAVKKLKPEGFQGHKEWLS------EVNYL 139
L+G GGFG VY G R + +A+K ++ + E + EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 140 GQLH--HPNLVKLIGFCLDGENRLLVYEY-MPKGSLENHLFRRGA------RPLPWTLRI 190
++ +++L+ + ++ +L+ E P L + + RGA R W +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-- 152
Query: 191 KVAIGAARGLSFLHEAEQQVIYRDFKASNILLD-SEFNAKLSDFGLAKAGPTGDRTHVST 249
+ A R H V++RD K NIL+D + KL DFG +G T V T
Sbjct: 153 ---LEAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYT 200
Query: 250 QVMGTRGYAAPEYLATGRLTAK-CDVYSFGVVLLELLSGR------------RAVDKTRV 296
GTR Y+ PE++ R + V+S G++L +++ G + + RV
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV 260
Query: 297 GAE-QNLVDWA 306
+E Q+L+ W
Sbjct: 261 SSECQHLIRWC 271
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,686,529
Number of Sequences: 62578
Number of extensions: 577897
Number of successful extensions: 4602
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 1882
Number of HSP's gapped (non-prelim): 1185
length of query: 441
length of database: 14,973,337
effective HSP length: 102
effective length of query: 339
effective length of database: 8,590,381
effective search space: 2912139159
effective search space used: 2912139159
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)