Your job contains 1 sequence.
>013559
MEPEDEQSNSMMEEICSNGGEESARTRPIISGEQLDVEAYASLYQGRTKITRLMFIADHC
DIASMQLEALRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRKE
KLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCM
SAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLE
VGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELIN
DFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMAN
AFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVR
AMLLRANLLKHEYNVRAARKL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013559
(441 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2098851 - symbol:FUS6 "FUSCA 6" species:3702 "... 1872 3.1e-193 1
DICTYBASE|DDB_G0283587 - symbol:csn1 "COP9 signalosome co... 1038 7.5e-105 1
FB|FBgn0027057 - symbol:CSN1b "COP9 complex homolog subun... 852 3.4e-94 2
UNIPROTKB|F1NB10 - symbol:GPS1 "Uncharacterized protein" ... 866 1.3e-86 1
UNIPROTKB|F1NJQ7 - symbol:GPS1 "Uncharacterized protein" ... 866 1.3e-86 1
ZFIN|ZDB-GENE-041111-240 - symbol:gps1 "G protein pathway... 866 1.3e-86 1
MGI|MGI:2384801 - symbol:Gps1 "G protein pathway suppress... 860 5.4e-86 1
UNIPROTKB|F1P996 - symbol:GPS1 "Uncharacterized protein" ... 860 5.4e-86 1
UNIPROTKB|C9JFE4 - symbol:GPS1 "G protein pathway suppres... 857 1.1e-85 1
RGD|621532 - symbol:Gps1 "G protein pathway suppressor 1"... 857 1.1e-85 1
UNIPROTKB|Q13098 - symbol:GPS1 "COP9 signalosome complex ... 854 2.4e-85 1
UNIPROTKB|F1MP10 - symbol:GPS1 "Uncharacterized protein" ... 852 3.8e-85 1
ASPGD|ASPL0000047276 - symbol:csnA species:162425 "Emeric... 678 1.1e-66 1
FB|FBgn0028838 - symbol:CSN1a "COP9 complex homolog subun... 380 2.0e-41 2
POMBASE|SPBC215.03c - symbol:csn1 "COP9/signalosome compl... 400 3.0e-37 1
UNIPROTKB|J3KSA5 - symbol:GPS1 "COP9 signalosome complex ... 376 1.1e-34 1
WB|WBGene00000813 - symbol:csn-1 species:6239 "Caenorhabd... 268 3.9e-30 2
UNIPROTKB|Q9GS00 - symbol:csn-1 "COP9 signalosome complex... 268 3.9e-30 2
WB|WBGene00004463 - symbol:rpn-7 species:6239 "Caenorhabd... 248 8.8e-19 1
DICTYBASE|DDB_G0270188 - symbol:psmD6 "26S proteasome non... 215 4.9e-15 1
TAIR|locus:2126798 - symbol:AT4G24820 "AT4G24820" species... 215 5.2e-15 1
UNIPROTKB|F1N903 - symbol:PSMD6 "Uncharacterized protein"... 212 1.3e-14 1
TAIR|locus:2087745 - symbol:AT3G12850 species:3702 "Arabi... 180 1.5e-14 2
SGD|S000006312 - symbol:RPN7 "non-ATPase regulatory subun... 203 1.7e-13 1
UNIPROTKB|F1MXE4 - symbol:PSMD6 "26S proteasome non-ATPas... 200 2.8e-13 1
UNIPROTKB|Q3T0B2 - symbol:PSMD6 "26S proteasome non-ATPas... 200 2.8e-13 1
RGD|735127 - symbol:Psmd6 "proteasome (prosome, macropain... 200 2.8e-13 1
MGI|MGI:1913663 - symbol:Psmd6 "proteasome (prosome, macr... 199 3.7e-13 1
UNIPROTKB|E2RN00 - symbol:PSMD6 "Uncharacterized protein"... 200 5.8e-13 1
ZFIN|ZDB-GENE-040426-1038 - symbol:psmd6 "proteasome (pro... 197 6.0e-13 1
UNIPROTKB|Q6UV22 - symbol:PSMD6 "KIAA0107 isoform" specie... 195 7.3e-13 1
UNIPROTKB|Q15008 - symbol:PSMD6 "26S proteasome non-ATPas... 196 8.1e-13 1
GENEDB_PFALCIPARUM|PF11_0303 - symbol:PF11_0303 "26S prot... 195 1.1e-12 1
UNIPROTKB|C9IZE4 - symbol:PSMD6 "Proteasome (Prosome, mac... 195 1.5e-12 1
FB|FBgn0028688 - symbol:Rpn7 "Regulatory particle non-ATP... 185 1.4e-11 1
UNIPROTKB|J3KTB0 - symbol:GPS1 "COP9 signalosome complex ... 164 2.0e-11 1
POMBASE|SPBC582.07c - symbol:rpn7 "19S proteasome regulat... 181 4.6e-11 1
UNIPROTKB|J3QS88 - symbol:GPS1 "COP9 signalosome complex ... 148 1.1e-09 1
CGD|CAL0003998 - symbol:RPN7 species:5476 "Candida albica... 161 7.7e-09 1
UNIPROTKB|J3QL53 - symbol:GPS1 "COP9 signalosome complex ... 130 9.8e-08 1
ASPGD|ASPL0000043868 - symbol:AN1922 species:162425 "Emer... 119 1.2e-07 2
FB|FBgn0013746 - symbol:alien "alien" species:7227 "Droso... 134 9.5e-06 1
SGD|S000002255 - symbol:RPN6 "Essential, non-ATPase regul... 126 7.0e-05 1
UNIPROTKB|E2REA8 - symbol:COPS2 "Uncharacterized protein"... 122 0.00020 1
UNIPROTKB|P61201 - symbol:COPS2 "COP9 signalosome complex... 122 0.00020 1
MGI|MGI:1330276 - symbol:Cops2 "COP9 (constitutive photom... 122 0.00020 1
RGD|628791 - symbol:Cops2 "COP9 signalosome subunit 2" sp... 122 0.00020 1
UNIPROTKB|P61203 - symbol:Cops2 "COP9 signalosome complex... 122 0.00020 1
ZFIN|ZDB-GENE-040625-15 - symbol:cops2 "COP9 constitutive... 122 0.00020 1
UNIPROTKB|G3X736 - symbol:COPS2 "Uncharacterized protein"... 122 0.00020 1
TAIR|locus:2030017 - symbol:ATS9 "AT1G29150" species:3702... 117 0.00065 1
POMBASE|SPAC23G3.11 - symbol:rpn6 "19S proteasome regulat... 116 0.00084 1
>TAIR|locus:2098851 [details] [associations]
symbol:FUS6 "FUSCA 6" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008180 "signalosome" evidence=TAS;IPI]
[GO:0009640 "photomorphogenesis" evidence=RCA;TAS] [GO:0000338
"protein deneddylation" evidence=TAS] [GO:0006461 "protein complex
assembly" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0009646 "response to absence of light"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0000003 "reproduction" evidence=RCA]
[GO:0006325 "chromatin organization" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP;RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010431 "seed maturation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006461 GO:GO:0009651
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0006972
GO:GO:0009646 EMBL:AL137898 GO:GO:0009585 GO:GO:0008180
GO:GO:0010388 EMBL:L26498 EMBL:AF395057 EMBL:AF360295 EMBL:AK117532
EMBL:AY051056 EMBL:AJ243015 IPI:IPI00545799 PIR:T47906
RefSeq:NP_567109.1 UniGene:At.303 ProteinModelPortal:P45432
IntAct:P45432 STRING:P45432 PaxDb:P45432 PRIDE:P45432
EnsemblPlants:AT3G61140.1 GeneID:825286 KEGG:ath:AT3G61140
TAIR:At3g61140 eggNOG:COG5187 HOGENOM:HOG000091977
InParanoid:P45432 KO:K12175 OMA:CPPLRVE PhylomeDB:P45432
ProtClustDB:CLSN2689283 Genevestigator:P45432 GermOnline:AT3G61140
InterPro:IPR019585 Pfam:PF10602 Uniprot:P45432
Length = 441
Score = 1872 (664.0 bits), Expect = 3.1e-193, P = 3.1e-193
Identities = 358/442 (80%), Positives = 403/442 (91%)
Query: 1 MEPEDEQSNSMMEEICSNGGEESARTRPIISGEQLDVEAYASLYQGRTKITRLMFIADHC 60
ME ++E S MME +C+NGGEE++ RPIISGE LD+EAYA+LY+GRTKI RL+FIA+HC
Sbjct: 1 MERDEEASGPMME-MCTNGGEETSNRRPIISGEPLDIEAYAALYKGRTKIMRLLFIANHC 59
Query: 61 D-IASMQLEALRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRK 119
++Q +ALRMAYDEIKKGENTQLFREVV KI RLG Y MD AWC++VDRRAEQ+K
Sbjct: 60 GGNHALQFDALRMAYDEIKKGENTQLFREVVNKIGNRLGEKYGMDLAWCEAVDRRAEQKK 119
Query: 120 EKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMC 179
KLENEL++YRTNLIKESIRMGYNDFGDFYYA G LGDAFK+Y+RTRDYCTT+KHIIHMC
Sbjct: 120 VKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMC 179
Query: 180 MSAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFL 239
M+AILVSIEMGQFTHVTSYV+KAEQ PE LEP+ AKLRCA+GLAHLE +KYKLAARKFL
Sbjct: 180 MNAILVSIEMGQFTHVTSYVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFL 239
Query: 240 EVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELI 299
+V P+LGNSYNEVIA QD+ATYGGLCALASFDR+ELK KVIDN+NFRNFLELVP+VRELI
Sbjct: 240 DVNPELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELI 299
Query: 300 NDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMA 359
NDFYSSRYASCL+YL +LK+NLLLDIHLHDHV+TLYDQIR KALIQYT PFVSVDL MA
Sbjct: 300 NDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMA 359
Query: 360 NAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDV 419
+AFKTSV+G+EKELEALITDNQIQARIDSHNKILYARHADQRNATFQ+VLQ G+EFD+DV
Sbjct: 360 DAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDV 419
Query: 420 RAMLLRANLLKHEYNVRAARKL 441
RAMLLRANLLKHEY+ R+ARKL
Sbjct: 420 RAMLLRANLLKHEYHARSARKL 441
>DICTYBASE|DDB_G0283587 [details] [associations]
symbol:csn1 "COP9 signalosome complex subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0283587 GO:GO:0005737 GO:GO:0043161
GenomeReviews:CM000153_GR Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AAFI02000055 GO:GO:0008180 eggNOG:COG5187 KO:K12175
OMA:CPPLRVE InterPro:IPR019585 Pfam:PF10602 EMBL:DQ309429
RefSeq:XP_639011.1 ProteinModelPortal:Q54QX3 STRING:Q54QX3
PRIDE:Q54QX3 EnsemblProtists:DDB0233099 GeneID:8624141
KEGG:ddi:DDB_G0283587 ProtClustDB:CLSZ2728967 Uniprot:Q54QX3
Length = 458
Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
Identities = 206/437 (47%), Positives = 297/437 (67%)
Query: 4 EDEQSNSMMEEICSNGGEESARTRPIISGEQLDVEAYASLYQGRTKITRLMFIADHCDIA 63
ED Q E S+ + IS E D+E Y + Y G TKI RL+FIAD+C
Sbjct: 2 EDMQVEKNTEGSSSSSSNNNNNNS--ISNE-FDLETYINNYSGFTKIHRLIFIADNCK-- 56
Query: 64 SMQLEALRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRKEKLE 123
+++EA MA E++K N +L+ ++ K G L +D + +++ ++ + +KLE
Sbjct: 57 QLEVEAYNMALKEVQKTPNLELYNTIINKSHGIL----ELDPVYIENLSKKNSLQLDKLE 112
Query: 124 NELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAI 183
+LN ++N++K+SIR ND G+FYY G +A K ++RTRDYCTTSKH++ MC + I
Sbjct: 113 QDLNTAKSNMVKDSIRFAQNDLGEFYYKIGDHQNALKCFIRTRDYCTTSKHVLAMCFNII 172
Query: 184 LVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGP 243
+ ++ +TH SY++KAEQ+P+ L+ V+ AKLR GL +L+ +YKLAARKF+E
Sbjct: 173 KLGVDTQNYTHAPSYIAKAEQSPD-LDNVSNAKLRSVNGLYNLDGSRYKLAARKFIETPF 231
Query: 244 DLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFY 303
+ N ++++I+ QD+A YGGLCALA+FDR ELK KVID+ F+N+LELVPE+RELINDFY
Sbjct: 232 EQSNVFSDIISPQDIAYYGGLCALATFDRNELKKKVIDDPMFKNYLELVPELRELINDFY 291
Query: 304 SSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFK 363
+++Y SCL YL +K LLLDIHL+ HVE LY +IR+KAL+QY P+ SVD+++MA+AF
Sbjct: 292 NTKYGSCLKYLDKMKPILLLDIHLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMASAFN 351
Query: 364 TSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRAML 423
T+V +EKE+ LI +N+IQARIDSHNK LYAR ADQR TF++ +Q GS+F ++L
Sbjct: 352 TTVTLLEKEISKLIMENEIQARIDSHNKRLYARKADQRTTTFEKTVQVGSDFQNSSNSLL 411
Query: 424 LRANLLKHEYNVRAARK 440
LR +L + + + RK
Sbjct: 412 LRLEMLNNNISTVSNRK 428
>FB|FBgn0027057 [details] [associations]
symbol:CSN1b "COP9 complex homolog subunit 1 b" species:7227
"Drosophila melanogaster" [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISS]
[GO:0008180 "signalosome" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0007095
GO:GO:0050821 EMBL:AE014296 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0046331 GO:GO:0008180
GO:GO:0000338 eggNOG:COG5187 KO:K12175 OMA:CPPLRVE
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
EMBL:AF129080 EMBL:AY051972 RefSeq:NP_524152.2 UniGene:Dm.2527
ProteinModelPortal:Q9VVU5 STRING:Q9VVU5 PaxDb:Q9VVU5 PRIDE:Q9VVU5
EnsemblMetazoa:FBtr0075074 GeneID:40063 KEGG:dme:Dmel_CG3889
CTD:40063 FlyBase:FBgn0027057 InParanoid:Q9VVU5 OrthoDB:EOG4PVMDW
PhylomeDB:Q9VVU5 GenomeRNAi:40063 NextBio:816813 Bgee:Q9VVU5
GermOnline:CG3889 GO:GO:0019781 Uniprot:Q9VVU5
Length = 525
Score = 852 (305.0 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 169/343 (49%), Positives = 239/343 (69%)
Query: 101 YAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFK 160
+A D AW D+ ++A + EKL+++L Y++N IKESIR G++D D Y + G L +A K
Sbjct: 156 FAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALK 215
Query: 161 SYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTIA----- 215
Y R RDYCT+ KH+++MC++ I VSI + + HV SY+SKAE TP+ E A
Sbjct: 216 CYSRARDYCTSGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFAEGSKEANAQVH 275
Query: 216 -KLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAE 274
+L CAAGLA L+ +KYK+AA+ FL D + + E+I+ +VA YGGLCALA+FDR E
Sbjct: 276 TRLECAAGLAELQQKKYKVAAKHFLNANFDHCD-FPEMISTSNVAVYGGLCALATFDRQE 334
Query: 275 LKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETL 334
LK VI + +F+ FLEL P++R++I FY S+YASCL L ++ NLL+D+++ HV TL
Sbjct: 335 LKRLVIASTSFKLFLELEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTTL 394
Query: 335 YDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILY 394
Y +IRN+ALIQY P++S D+H MA AF +SV +E E+ LI D QIQARIDSHNKIL+
Sbjct: 395 YTKIRNRALIQYFSPYMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKILF 454
Query: 395 ARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRA 437
A+ ADQRN+TF+R L G ++ + R ++LRA +LK +V++
Sbjct: 455 AKEADQRNSTFERALIMGKQYQRHTRMLVLRAAMLKSHIHVKS 497
Score = 105 (42.0 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 20/73 (27%), Positives = 43/73 (58%)
Query: 21 EESARTRPIISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKG 80
E + + ++ +D+E YA+ Y G ++ RL+++AD C + + +EAL+MA ++
Sbjct: 29 ENNEEQQIVVENPSIDLEVYANQYAGIVRLHRLIYVADVCPV--LAVEALKMAITYVQTT 86
Query: 81 ENTQLFREVVKKI 93
N L++ + K++
Sbjct: 87 YNVNLYQVLHKRL 99
>UNIPROTKB|F1NB10 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AADN02029975
IPI:IPI00580463 PRIDE:F1NB10 Ensembl:ENSGALT00000004462
ArrayExpress:F1NB10 Uniprot:F1NB10
Length = 487
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 183/376 (48%), Positives = 251/376 (66%)
Query: 74 YDEI--KKGENTQLFREVVKKI-DGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYR 130
Y+EI K E T+ + + D + P +D AW ++ ++A + EKL+ +L Y+
Sbjct: 91 YEEIHRKLSEATRELQNTPDAVPDSGIEPP-PLDTAWVEATRKKALLKLEKLDTDLKNYK 149
Query: 131 TNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMG 190
N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ +
Sbjct: 150 GNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQ 209
Query: 191 QFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEV 241
++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ FL
Sbjct: 210 NWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLA 269
Query: 242 GPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELIND 301
D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I
Sbjct: 270 SFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFK 328
Query: 302 FYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANA 361
FY S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D+H MA A
Sbjct: 329 FYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMATA 388
Query: 362 FKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRA 421
F T+VA +E EL LI + I ARIDSH+KILYAR DQR+ TF++ L G EF + +A
Sbjct: 389 FNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKA 448
Query: 422 MLLRANLLKHEYNVRA 437
M+LRA +L+++ +V++
Sbjct: 449 MILRAAVLRNQIHVKS 464
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 89/227 (39%), Positives = 132/227 (58%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YAS Y G +I RL FIADHC +++EAL+MA +++ N ++ E
Sbjct: 36 VVENPTLDLEQYASSYSGLMRIERLQFIADHCP--QLRVEALKMALSFVQRTFNVDVYEE 93
Query: 89 VVKKI---------------DGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYRTNL 133
+ +K+ D + P +D AW ++ ++A + EKL+ +L Y+ N
Sbjct: 94 IHRKLSEATRELQNTPDAVPDSGIEPP-PLDTAWVEATRKKALLKLEKLDTDLKNYKGNS 152
Query: 134 IKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFT 193
IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++
Sbjct: 153 IKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWS 212
Query: 194 HVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLE--ARKYKLAARKF 238
HV SYVSKAE TPE E + A L L+ A +LAARK+
Sbjct: 213 HVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKY 259
>UNIPROTKB|F1NJQ7 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AADN02029975
IPI:IPI00818730 Ensembl:ENSGALT00000038889 OMA:SHERARS
ArrayExpress:F1NJQ7 Uniprot:F1NJQ7
Length = 491
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 183/376 (48%), Positives = 251/376 (66%)
Query: 74 YDEI--KKGENTQLFREVVKKI-DGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYR 130
Y+EI K E T+ + + D + P +D AW ++ ++A + EKL+ +L Y+
Sbjct: 95 YEEIHRKLSEATRELQNTPDAVPDSGIEPP-PLDTAWVEATRKKALLKLEKLDTDLKNYK 153
Query: 131 TNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMG 190
N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ +
Sbjct: 154 GNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQ 213
Query: 191 QFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEV 241
++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ FL
Sbjct: 214 NWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLA 273
Query: 242 GPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELIND 301
D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I
Sbjct: 274 SFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFK 332
Query: 302 FYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANA 361
FY S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D+H MA A
Sbjct: 333 FYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMATA 392
Query: 362 FKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRA 421
F T+VA +E EL LI + I ARIDSH+KILYAR DQR+ TF++ L G EF + +A
Sbjct: 393 FNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKA 452
Query: 422 MLLRANLLKHEYNVRA 437
M+LRA +L+++ +V++
Sbjct: 453 MILRAAVLRNQIHVKS 468
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 89/227 (39%), Positives = 132/227 (58%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YAS Y G +I RL FIADHC +++EAL+MA +++ N ++ E
Sbjct: 40 VVENPTLDLEQYASSYSGLMRIERLQFIADHCP--QLRVEALKMALSFVQRTFNVDVYEE 97
Query: 89 VVKKI---------------DGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYRTNL 133
+ +K+ D + P +D AW ++ ++A + EKL+ +L Y+ N
Sbjct: 98 IHRKLSEATRELQNTPDAVPDSGIEPP-PLDTAWVEATRKKALLKLEKLDTDLKNYKGNS 156
Query: 134 IKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFT 193
IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++
Sbjct: 157 IKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWS 216
Query: 194 HVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLE--ARKYKLAARKF 238
HV SYVSKAE TPE E + A L L+ A +LAARK+
Sbjct: 217 HVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKY 263
>ZFIN|ZDB-GENE-041111-240 [details] [associations]
symbol:gps1 "G protein pathway suppressor 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-041111-240 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 HOGENOM:HOG000091977 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 HOVERGEN:HBG030722
EMBL:BX897685 IPI:IPI00774251 UniGene:Dr.52385
Ensembl:ENSDART00000141106 Uniprot:B0S7K9
Length = 490
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 186/379 (49%), Positives = 254/379 (67%)
Query: 74 YDEI--KKGENTQLFREVVKKID----GRLGPNYAMDEAWCDSVDRRAEQRKEKLENELN 127
Y+EI K E T+ F EV D G + P +D AW +S ++A + EKL+ +L
Sbjct: 91 YEEIHRKLTEATRQFLEVQGVPDAVPEGAVEPP-PLDTAWAESTRKKALLKLEKLDTDLK 149
Query: 128 AYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSI 187
Y+ N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+
Sbjct: 150 NYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSV 209
Query: 188 EMGQFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKF 238
+ ++HV SYVSKAE TPE E + KL+CAAG A L +RKYK AA+ F
Sbjct: 210 YLQNWSHVLSYVSKAESTPEIAEQRGERDSQNQAVLTKLKCAAGKAELASRKYKPAAKCF 269
Query: 239 LEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVREL 298
L+ D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++
Sbjct: 270 LQASFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDI 328
Query: 299 INDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMM 358
I FY S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D++ M
Sbjct: 329 IFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMNKM 388
Query: 359 ANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQD 418
A AF T+VA +E EL LI + I ARIDSH+KILYAR DQR+ TF++ LQ G EF +
Sbjct: 389 AVAFNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLQMGKEFQRR 448
Query: 419 VRAMLLRANLLKHEYNVRA 437
+AM+LRA +L+++ +V++
Sbjct: 449 AKAMILRAAVLRNQIHVKS 467
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 82/203 (40%), Positives = 121/203 (59%)
Query: 26 TRPIISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQL 85
T ++ LD+E YAS Y G +I RL FIADHC +++EAL+MA +++ N +
Sbjct: 33 TNYVVENPTLDLEQYASSYSGLMRIERLQFIADHCP--QLRVEALKMALSFVQRTFNVDV 90
Query: 86 FREVVKKI------------------DGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELN 127
+ E+ +K+ +G + P +D AW +S ++A + EKL+ +L
Sbjct: 91 YEEIHRKLTEATRQFLEVQGVPDAVPEGAVEPP-PLDTAWAESTRKKALLKLEKLDTDLK 149
Query: 128 AYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSI 187
Y+ N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+
Sbjct: 150 NYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSV 209
Query: 188 EMGQFTHVTSYVSKAEQTPEALE 210
+ ++HV SYVSKAE TPE E
Sbjct: 210 YLQNWSHVLSYVSKAESTPEIAE 232
>MGI|MGI:2384801 [details] [associations]
symbol:Gps1 "G protein pathway suppressor 1" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008180 "signalosome" evidence=ISO;IDA]
[GO:0010388 "cullin deneddylation" evidence=ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 MGI:MGI:2384801
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 EMBL:AL663090 GO:GO:0010388
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 HOVERGEN:HBG030722
EMBL:AK088490 EMBL:BC003350 IPI:IPI00116793 IPI:IPI00480341
UniGene:Mm.30195 ProteinModelPortal:Q99LD4 STRING:Q99LD4
PhosphoSite:Q99LD4 PaxDb:Q99LD4 PRIDE:Q99LD4 NextBio:372621
Bgee:Q99LD4 CleanEx:MM_GPS1 Genevestigator:Q99LD4
GermOnline:ENSMUSG00000025156 Uniprot:Q99LD4
Length = 471
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 183/376 (48%), Positives = 251/376 (66%)
Query: 74 YDEI--KKGENTQLFREVVKKI-DGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYR 130
Y+EI K E T+ + I + + P +D AW ++ ++A + EKL+ +L Y+
Sbjct: 75 YEEIHRKLSEATRELQNAPDAIPESGVEPP-PLDTAWVEATRKKALLKLEKLDTDLKNYK 133
Query: 131 TNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMG 190
N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ +
Sbjct: 134 GNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQ 193
Query: 191 QFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEV 241
++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ FL
Sbjct: 194 NWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLA 253
Query: 242 GPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELIND 301
D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I
Sbjct: 254 SFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFK 312
Query: 302 FYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANA 361
FY S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D+H MA A
Sbjct: 313 FYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAA 372
Query: 362 FKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRA 421
F T+VA +E EL LI + I ARIDSH+KILYAR DQR+ TF++ L G EF + +A
Sbjct: 373 FNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKA 432
Query: 422 MLLRANLLKHEYNVRA 437
M+LRA +L+++ +V++
Sbjct: 433 MILRAAVLRNQIHVKS 448
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/226 (38%), Positives = 130/226 (57%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YA+ Y G +I RL FIAD C +++EAL+MA +++ N ++ E
Sbjct: 20 VVENPTLDLEQYAASYSGLMRIERLQFIADRCP--PLRVEALKMALSFVQRTFNVDMYEE 77
Query: 89 VVKKIDGRL-----GPNYA---------MDEAWCDSVDRRAEQRKEKLENELNAYRTNLI 134
+ +K+ P+ +D AW ++ ++A + EKL+ +L Y+ N I
Sbjct: 78 IHRKLSEATRELQNAPDAIPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSI 137
Query: 135 KESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTH 194
KESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++H
Sbjct: 138 KESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSH 197
Query: 195 VTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLE--ARKYKLAARKF 238
V SYVSKAE TPE E + A L L+ A +LAARK+
Sbjct: 198 VLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKY 243
>UNIPROTKB|F1P996 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388
OMA:CPPLRVE InterPro:IPR019585 Pfam:PF10602
GeneTree:ENSGT00510000046608 EMBL:AAEX03006161
Ensembl:ENSCAFT00000009593 Uniprot:F1P996
Length = 433
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 183/376 (48%), Positives = 251/376 (66%)
Query: 74 YDEI--KKGENTQLFREVVKKI-DGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYR 130
Y+EI K E T+ + I + + P +D AW ++ ++A + EKL+ +L Y+
Sbjct: 37 YEEIHRKLSEATRELQNAPDTIPESGVEPP-PLDTAWVEATRKKALLKLEKLDTDLKNYK 95
Query: 131 TNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMG 190
N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ +
Sbjct: 96 GNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQ 155
Query: 191 QFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEV 241
++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ FL
Sbjct: 156 NWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLA 215
Query: 242 GPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELIND 301
D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I
Sbjct: 216 SFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFK 274
Query: 302 FYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANA 361
FY S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D+H MA A
Sbjct: 275 FYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAA 334
Query: 362 FKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRA 421
F T+VA +E EL LI + I ARIDSH+KILYAR DQR+ TF++ L G EF + +A
Sbjct: 335 FNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKA 394
Query: 422 MLLRANLLKHEYNVRA 437
M+LRA +L+++ +V++
Sbjct: 395 MILRAAVLRNQIHVKS 410
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 80/206 (38%), Positives = 120/206 (58%)
Query: 49 KITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFREVVKKIDGRL-----GPNYA- 102
+I RL FIADHC +++EAL+MA +++ N ++ E+ +K+ P+
Sbjct: 2 RIERLQFIADHCP--PLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDTIP 59
Query: 103 --------MDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGA 154
+D AW ++ ++A + EKL+ +L Y+ N IKESIR G++D GD Y G
Sbjct: 60 ESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGD 119
Query: 155 LGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTI 214
L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++HV SYVSKAE TPE E
Sbjct: 120 LSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 179
Query: 215 AKLRCAAGLAHLE--ARKYKLAARKF 238
+ A L L+ A +LAARK+
Sbjct: 180 RDSQTQAILTKLKCAAGLAELAARKY 205
>UNIPROTKB|C9JFE4 [details] [associations]
symbol:GPS1 "G protein pathway suppressor 1, isoform CRA_b"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:CH471099 HOGENOM:HOG000091977
InterPro:IPR019585 Pfam:PF10602 EMBL:AC135056 IPI:IPI00300386
UniGene:Hs.268530 HGNC:HGNC:4549 ChiTaRS:GPS1 STRING:C9JFE4
Ensembl:ENST00000320548 OrthoDB:EOG469QTM Uniprot:C9JFE4
Length = 471
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 182/376 (48%), Positives = 251/376 (66%)
Query: 74 YDEI--KKGENTQLFREVVKKI-DGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYR 130
Y+EI K E T+ + I + + P A+D AW ++ ++A + EKL+ +L Y+
Sbjct: 75 YEEIHRKLSEATRELQNAPDAIPESGVEPP-ALDTAWVEATRKKALLKLEKLDTDLKNYK 133
Query: 131 TNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMG 190
N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ +
Sbjct: 134 GNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQ 193
Query: 191 QFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEV 241
++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ L
Sbjct: 194 NWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLA 253
Query: 242 GPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELIND 301
D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I
Sbjct: 254 SFDHCD-FPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFK 312
Query: 302 FYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANA 361
FY S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D+H MA A
Sbjct: 313 FYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAA 372
Query: 362 FKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRA 421
F T+VA +E EL LI + I AR+DSH+KILYAR DQR+ TF++ L G EF + +A
Sbjct: 373 FNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKA 432
Query: 422 MLLRANLLKHEYNVRA 437
M+LRA +L+++ +V++
Sbjct: 433 MMLRAAVLRNQIHVKS 448
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 88/226 (38%), Positives = 133/226 (58%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YA+ Y G +I RL FIADHC ++++EAL+MA +++ N ++ E
Sbjct: 20 VVENPSLDLEQYAASYSGLMRIERLQFIADHCP--TLRVEALKMALSFVQRTFNVDMYEE 77
Query: 89 VVKKIDGRL-----GPNY---------AMDEAWCDSVDRRAEQRKEKLENELNAYRTNLI 134
+ +K+ P+ A+D AW ++ ++A + EKL+ +L Y+ N I
Sbjct: 78 IHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSI 137
Query: 135 KESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTH 194
KESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++H
Sbjct: 138 KESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSH 197
Query: 195 VTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLE--ARKYKLAARKF 238
V SYVSKAE TPE E + A L L+ A +LAARK+
Sbjct: 198 VLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKY 243
>RGD|621532 [details] [associations]
symbol:Gps1 "G protein pathway suppressor 1" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation" evidence=ISO]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
RGD:621532 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 KO:K12175 InterPro:IPR019585
Pfam:PF10602 CTD:2873 HOVERGEN:HBG030722 EMBL:X87885 EMBL:BC061746
IPI:IPI00208644 PIR:S57449 RefSeq:NP_001257868.1 RefSeq:NP_446421.3
UniGene:Rn.16873 PhosphoSite:P97834 PRIDE:P97834 GeneID:117039
KEGG:rno:117039 NextBio:619843 Genevestigator:P97834 Uniprot:P97834
Length = 471
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 182/376 (48%), Positives = 251/376 (66%)
Query: 74 YDEI--KKGENTQLFREVVKKI-DGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYR 130
Y+EI K E T+ + I + + P +D AW ++ ++A + EKL+ +L Y+
Sbjct: 75 YEEIHRKLSEATRELQNAPDAIPESGVEPP-PLDTAWVEATRKKALLKLEKLDTDLKNYK 133
Query: 131 TNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMG 190
N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ +
Sbjct: 134 GNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQ 193
Query: 191 QFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEV 241
++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ FL
Sbjct: 194 NWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLA 253
Query: 242 GPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELIND 301
D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I
Sbjct: 254 SFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFK 312
Query: 302 FYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANA 361
FY S+YASCL L +K NLLLD++L HV TLY QIRN+ALIQY P+VS D+H MA A
Sbjct: 313 FYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAA 372
Query: 362 FKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDVRA 421
F T+VA +E EL +I + I ARIDSH+KILYAR DQR+ TF++ L G EF + +A
Sbjct: 373 FNTTVAALEDELTQVILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKA 432
Query: 422 MLLRANLLKHEYNVRA 437
M+LRA +L+++ +V++
Sbjct: 433 MILRAAVLRNQIHVKS 448
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/226 (38%), Positives = 130/226 (57%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YA+ Y G +I RL FIAD C +++EAL+MA +++ N ++ E
Sbjct: 20 VVENPTLDLEQYAASYSGLMRIERLQFIADRCP--PLRVEALKMALSFVQRTFNVDMYEE 77
Query: 89 VVKKIDGRL-----GPNYA---------MDEAWCDSVDRRAEQRKEKLENELNAYRTNLI 134
+ +K+ P+ +D AW ++ ++A + EKL+ +L Y+ N I
Sbjct: 78 IHRKLSEATRELQNAPDAIPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSI 137
Query: 135 KESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTH 194
KESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++H
Sbjct: 138 KESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSH 197
Query: 195 VTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLE--ARKYKLAARKF 238
V SYVSKAE TPE E + A L L+ A +LAARK+
Sbjct: 198 VLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKY 243
>UNIPROTKB|Q13098 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IDA] [GO:0010388 "cullin
deneddylation" evidence=IDA] [GO:0000188 "inactivation of MAPK
activity" evidence=TAS] [GO:0005095 "GTPase inhibitor activity"
evidence=TAS] [GO:0007049 "cell cycle" evidence=TAS] [GO:0007254
"JNK cascade" evidence=TAS] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0000188
GO:GO:0007254 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049
GO:GO:0005095 Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388
eggNOG:COG5187 HOGENOM:HOG000091977 KO:K12175 OMA:CPPLRVE
InterPro:IPR019585 Pfam:PF10602 EMBL:U20285 EMBL:AK093283
EMBL:AC135056 EMBL:BC000155 EMBL:BC064503 EMBL:BT009834
IPI:IPI00156282 IPI:IPI00300386 IPI:IPI00414289 IPI:IPI00921488
PIR:G01646 RefSeq:NP_004118.3 RefSeq:NP_997657.1 UniGene:Hs.268530
ProteinModelPortal:Q13098 DIP:DIP-42077N IntAct:Q13098
MINT:MINT-1203964 STRING:Q13098 PhosphoSite:Q13098 DMDM:223590263
PaxDb:Q13098 PRIDE:Q13098 DNASU:2873 Ensembl:ENST00000306823
Ensembl:ENST00000355130 Ensembl:ENST00000392358
Ensembl:ENST00000578552 GeneID:2873 KEGG:hsa:2873 UCSC:uc002kdk.1
UCSC:uc002kdl.1 UCSC:uc002kdm.1 CTD:2873 GeneCards:GC17P080009
HGNC:HGNC:4549 MIM:601934 neXtProt:NX_Q13098 PharmGKB:PA28944
HOVERGEN:HBG030722 ChiTaRS:GPS1 GenomeRNAi:2873 NextBio:11339
ArrayExpress:Q13098 Bgee:Q13098 CleanEx:HS_GPS1
Genevestigator:Q13098 GermOnline:ENSG00000169727 Uniprot:Q13098
Length = 491
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 174/345 (50%), Positives = 238/345 (68%)
Query: 102 AMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKS 161
A+D AW ++ ++A + EKL+ +L Y+ N IKESIR G++D GD Y G L +A K
Sbjct: 125 ALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKC 184
Query: 162 YVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEP---------V 212
Y R RDYCT++KH+I+MC++ I VS+ + ++HV SYVSKAE TPE E
Sbjct: 185 YSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQA 244
Query: 213 TIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDR 272
+ KL+CAAGLA L ARKYK AA+ L D + + E+++ +VA YGGLCALA+FDR
Sbjct: 245 ILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCD-FPELLSPSNVAIYGGLCALATFDR 303
Query: 273 AELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVE 332
EL+ VI + +F+ FLEL P+VR++I FY S+YASCL L +K NLLLD++L HV
Sbjct: 304 QELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVR 363
Query: 333 TLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKI 392
TLY QIRN+ALIQY P+VS D+H MA AF T+VA +E EL LI + I AR+DSH+KI
Sbjct: 364 TLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKI 423
Query: 393 LYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRA 437
LYAR DQR+ TF++ L G EF + +AM+LRA +L+++ +V++
Sbjct: 424 LYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKS 468
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 79/200 (39%), Positives = 120/200 (60%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YA+ Y G +I RL FIADHC ++++EAL+MA +++ N ++ E
Sbjct: 36 VVENPSLDLEQYAASYSGLMRIERLQFIADHCP--TLRVEALKMALSFVQRTFNVDMYEE 93
Query: 89 VVKKIDGRL---------GPNY---------AMDEAWCDSVDRRAEQRKEKLENELNAYR 130
+ +K+ P+ A+D AW ++ ++A + EKL+ +L Y+
Sbjct: 94 IHRKLSEATRSSLRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYK 153
Query: 131 TNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMG 190
N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ +
Sbjct: 154 GNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQ 213
Query: 191 QFTHVTSYVSKAEQTPEALE 210
++HV SYVSKAE TPE E
Sbjct: 214 NWSHVLSYVSKAESTPEIAE 233
>UNIPROTKB|F1MP10 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 OMA:CPPLRVE InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:DAAA02049401
IPI:IPI00867147 Ensembl:ENSBTAT00000025728 ArrayExpress:F1MP10
Uniprot:F1MP10
Length = 478
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 174/344 (50%), Positives = 237/344 (68%)
Query: 103 MDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSY 162
+D AW ++ ++A + EKL+ +L Y+ N IKESIR G++D GD Y G L +A K Y
Sbjct: 113 LDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 172
Query: 163 VRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEP---------VT 213
R RDYCT++KH+I+MC++ I VS+ + ++HV SYVSKAE TPE E
Sbjct: 173 SRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDTQTQAI 232
Query: 214 IAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRA 273
+ KL+CAAGLA L ARKYK AA+ FL D + + E+++ +VA YGGLCALA+FDR
Sbjct: 233 LTKLKCAAGLAELAARKYKQAAKCFLLASFDHCD-FPELLSPSNVAVYGGLCALATFDRQ 291
Query: 274 ELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVET 333
EL+ VI + +F+ FLEL P+VR++I FY S+YASCL L +K NLLLD++L HV T
Sbjct: 292 ELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRT 351
Query: 334 LYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKIL 393
LY QIRN+ALIQY P+VS D+ MA AF T+VA +E EL LI + I ARIDSH+KIL
Sbjct: 352 LYTQIRNRALIQYFSPYVSADMRKMATAFNTTVAALEDELTQLILEGLINARIDSHSKIL 411
Query: 394 YARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLLKHEYNVRA 437
YAR DQR+ TF++ L G EF + +AM+LRA +L+++ +V++
Sbjct: 412 YARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKS 455
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 87/226 (38%), Positives = 131/226 (57%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YA+ Y G +I RL FIADHC +++EAL+MA +++ N ++ E
Sbjct: 27 VVENPTLDLEQYAASYSGLMRIERLQFIADHCP--PLRVEALKMALSFVQRTFNVDMYEE 84
Query: 89 VVKKIDGRL-----GPNYA---------MDEAWCDSVDRRAEQRKEKLENELNAYRTNLI 134
+ +K+ P+ +D AW ++ ++A + EKL+ +L Y+ N I
Sbjct: 85 IHRKLSEAARELQNAPDAIPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSI 144
Query: 135 KESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTH 194
KESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++H
Sbjct: 145 KESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSH 204
Query: 195 VTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLE--ARKYKLAARKF 238
V SYVSKAE TPE E + A L L+ A +LAARK+
Sbjct: 205 VLSYVSKAESTPEIAEQRGERDTQTQAILTKLKCAAGLAELAARKY 250
>ASPGD|ASPL0000047276 [details] [associations]
symbol:csnA species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IMP] [GO:0090329 "regulation of DNA-dependent
DNA replication" evidence=IEA] [GO:0060625 "regulation of protein
deneddylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0051445 "regulation of meiotic cell cycle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 EMBL:AACD01000022
HOGENOM:HOG000091977 KO:K12175 OMA:CPPLRVE InterPro:IPR019585
Pfam:PF10602 eggNOG:NOG325807 EMBL:AY574249 RefSeq:XP_659095.1
STRING:Q5BD89 EnsemblFungi:CADANIAT00008114 GeneID:2874595
KEGG:ani:AN1491.2 OrthoDB:EOG4GTPP1 Uniprot:Q5BD89
Length = 498
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 160/437 (36%), Positives = 238/437 (54%)
Query: 20 GEESARTRPIISGEQ---LDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDE 76
G S P++ E+ ++E+Y + Y GRT+ RL I C + + ++AL+ A E
Sbjct: 34 GLVSTSAAPLVRVEEAPKFELESYIANYTGRTRFNRLYLIGT-CS-SYLAVDALKAAIAE 91
Query: 77 IKKGENTQLFREVVKKIDGRLGPNY---AMDEAWCDSVDRRAEQRKEKLENELNAYRTNL 133
K G++ + V+ + + PN +D W + + + ++LE+EL Y+ NL
Sbjct: 92 AKSGKDVARYLRAVQAL-ADVAPNEPEATIDSDWVERSQKVVKAETDRLEHELRGYKNNL 150
Query: 134 IKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFT 193
IKESIRMG + G Y+ G L AFK+Y R RD+CTT HI M I V+IE G +
Sbjct: 151 IKESIRMGNEELGQHYHRIGDLTSAFKAYSRMRDFCTTPSHIASMLFKIINVAIERGDWL 210
Query: 194 HVTSYVSKAEQT---PEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYN 250
+V S V + PE + K+ A GL+ L + Y AA F+ P LG+++N
Sbjct: 211 NVQSNVHRLRSQGGKPEE-QAKHQPKISAAMGLSQLHSGSYLEAANSFIATDPSLGDTFN 269
Query: 251 EVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASC 310
EV+ + DVA YGGLCALAS DR EL+ +V+DN +FRNFLEL P +R I+ F +S++ C
Sbjct: 270 EVLTSNDVAVYGGLCALASMDRNELQRRVLDNSSFRNFLELEPHIRRAISFFCNSKFRPC 329
Query: 311 LDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAF-------- 362
L+ L +A+ LLDIHL HV+ LY++IR K++ QY PF V L MA F
Sbjct: 330 LEILEAYRADYLLDIHLQRHVQVLYNRIRTKSIQQYLIPFNRVSLESMAKIFVLGNPTSQ 389
Query: 363 ---KTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDQDV 419
S + +EL +LI D + ARID +L + D+R + VL + + ++
Sbjct: 390 SSQSDSKSAFVQELISLIQDGTLDARIDLEKHVLVSTQGDKRIEVQEAVLDSLDNYVREA 449
Query: 420 RAMLLRANLLKHEYNVR 436
LLR+N+++ VR
Sbjct: 450 HLRLLRSNIIRAGLEVR 466
>FB|FBgn0028838 [details] [associations]
symbol:CSN1a "COP9 complex homolog subunit 1 a" species:7227
"Drosophila melanogaster" [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISS]
[GO:0008180 "signalosome" evidence=ISS;NAS] EMBL:AE014134
GO:GO:0008180 InterPro:IPR019585 Pfam:PF10602 eggNOG:NOG325807
GeneTree:ENSGT00510000046608 OMA:MFRNLIR EMBL:BT022388
RefSeq:NP_609720.1 UniGene:Dm.12169 IntAct:Q9VJR9 MINT:MINT-332295
STRING:Q9VJR9 EnsemblMetazoa:FBtr0080671 GeneID:34857
KEGG:dme:Dmel_CG4697 UCSC:CG4697-RA CTD:34857 FlyBase:FBgn0028838
InParanoid:Q9VJR9 OrthoDB:EOG4TB2SR GenomeRNAi:34857 NextBio:790568
Uniprot:Q9VJR9
Length = 364
Score = 380 (138.8 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 89/252 (35%), Positives = 139/252 (55%)
Query: 95 GRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGA 154
GR+ Y D W + A ++L+ ELN ++N +R + GD + G
Sbjct: 98 GRVVVPY--DSYWVEDNIMEATLMLQELDAELNFKKSNSGSSYVRRILEEIGDHHEKSGN 155
Query: 155 LGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTP---EALEP 211
L A K Y R R YCT+S+++I+M + I VSI M + HV +Y+ +A+Q E L
Sbjct: 156 LQMAVKFYARARPYCTSSENVINMFRNLIRVSIYMENWWHVLTYIDEAKQYAYGFENLAQ 215
Query: 212 VTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFD 271
A+L C AGLAHL + YK AA+ FL P Y++++A +DV Y GLCALA+FD
Sbjct: 216 EVPARLSCVAGLAHLGLKIYKSAAQYFLST-PYGRYDYDKIVAPEDVTLYAGLCALATFD 274
Query: 272 RAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHV 331
R L+ I++ F+ F +L P++ ++ FY+ + +C+ L ++ ++ LD++L HV
Sbjct: 275 RETLQLNAINSEAFKPFFQLSPKMWTILAKFYAGEFDACMTLLREIENHVRLDVYLSPHV 334
Query: 332 ETLYDQIRNKAL 343
LYD I + L
Sbjct: 335 SALYDLIMARML 346
Score = 76 (31.8 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 31 SGEQ--LDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
+GE+ L + +YA Y ++ RL FIA C + + AL +A + +K N +L+ E
Sbjct: 3 NGEETMLHLPSYADRYTDIPRLIRLKFIAQVCP--ELSVLALELALNHVKTTYNVKLYDE 60
Query: 89 VVKKI 93
+ K +
Sbjct: 61 LYKTL 65
>POMBASE|SPBC215.03c [details] [associations]
symbol:csn1 "COP9/signalosome complex subunit Csn1"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] [GO:0030163 "protein catabolic process" evidence=IGI]
[GO:0051445 "regulation of meiotic cell cycle" evidence=IMP]
[GO:0060625 "regulation of protein deneddylation" evidence=IMP]
[GO:0090329 "regulation of DNA-dependent DNA replication"
evidence=IMP] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
PomBase:SPBC215.03c GO:GO:0005829 EMBL:CU329671 Gene3D:1.10.10.10
InterPro:IPR011991 GenomeReviews:CU329671_GR GO:GO:0006974
GO:GO:0030163 GO:GO:0008180 GO:GO:0051445 GO:GO:0010388 KO:K12175
InterPro:IPR019585 Pfam:PF10602 eggNOG:NOG325807 OrthoDB:EOG4GTPP1
EMBL:AF314169 EMBL:AB027783 PIR:T39893 RefSeq:NP_596680.1
IntAct:O94308 STRING:O94308 EnsemblFungi:SPBC215.03c.1
GeneID:2540352 KEGG:spo:SPBC215.03c OMA:MFRNLIR NextBio:20801480
GO:GO:0090329 GO:GO:0060625 Uniprot:O94308
Length = 422
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 103/362 (28%), Positives = 179/362 (49%)
Query: 34 QLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIK-KGENTQLFREVVKK 92
Q +++ Y Y +KI R +F+A + ++ + A E+K K N +L++ + ++
Sbjct: 9 QEELKRYLDEYGVWSKIFRALFVARNSK--PLRSFCVHYAIKELKEKTYNLELYQSLFEE 66
Query: 93 IDGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAH 152
N +D W +SV +Q E+L EL AY+ NLI+ESIR D F+
Sbjct: 67 FQDCF-ENEQLDVEWVESVTFHRKQNLEQLRRELKAYKNNLIRESIRAAQLDLASFFADV 125
Query: 153 GALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEPV 212
G A +SY + R+YCT + I H+ + + +SI +G ++HV ++ S+A+ T A +
Sbjct: 126 GQFDSALRSYAKVREYCTNAGQIAHLSLELMRISIWIGNYSHVLAFGSRAKSTVSAAMEL 185
Query: 213 TIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDR 272
T + + GLA+ Y+ A FL+V D + +I D++ Y LCALA +D
Sbjct: 186 T-SPIYAYCGLANFCLGDYEEALAHFLKVETDTSDG---IITKTDISVYISLCALACWDH 241
Query: 273 AELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVE 332
L ++ N F +L P +R + + +Y+ LD L + LD++L +
Sbjct: 242 KRLIQELERNEEFNALSDLDPSLRRCLQAKCNRKYSLLLDTLQQNAQDYSLDMYLAPQLT 301
Query: 333 TLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKI 392
L+ IR ++L+ Y P+ ++ +A F IEK L +I ++ ++DS K
Sbjct: 302 NLFSLIRERSLLDYLIPYSALPFSKIAVDFHIDENFIEKNLLEIIEAKKLNGKVDSLQKR 361
Query: 393 LY 394
+Y
Sbjct: 362 VY 363
>UNIPROTKB|J3KSA5 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR019585 Pfam:PF10602 EMBL:AC135056 HGNC:HGNC:4549
ChiTaRS:GPS1 Ensembl:ENST00000585084 Uniprot:J3KSA5
Length = 210
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 78/193 (40%), Positives = 119/193 (61%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YA+ Y G +I RL FIADHC ++++EAL+MA +++ N ++ E
Sbjct: 20 VVENPSLDLEQYAASYSGLMRIERLQFIADHCP--TLRVEALKMALSFVQRTFNVDMYEE 77
Query: 89 VVKKIDGRL-----GPNY---------AMDEAWCDSVDRRAEQRKEKLENELNAYRTNLI 134
+ +K+ P+ A+D AW ++ ++A + EKL+ +L Y+ N I
Sbjct: 78 IHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSI 137
Query: 135 KESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTH 194
KESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++H
Sbjct: 138 KESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSH 197
Query: 195 VTSYVSKAEQTPE 207
V SYVSKAE TPE
Sbjct: 198 VLSYVSKAESTPE 210
>WB|WBGene00000813 [details] [associations]
symbol:csn-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0030154
GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910
GO:GO:0040035 GO:GO:0008180 KO:K12175 InterPro:IPR019585
Pfam:PF10602 EMBL:AL132895 RefSeq:NP_507507.1
ProteinModelPortal:Q9GS00 DIP:DIP-26112N IntAct:Q9GS00
MINT:MINT-1040684 STRING:Q9GS00 PaxDb:Q9GS00
EnsemblMetazoa:Y59A8A.1.1 EnsemblMetazoa:Y59A8A.1.2 GeneID:180168
KEGG:cel:CELE_Y59A8A.1 UCSC:Y59A8A.1 CTD:180168 WormBase:Y59A8A.1
eggNOG:NOG325807 GeneTree:ENSGT00510000046608 HOGENOM:HOG000017865
InParanoid:Q9GS00 OMA:RAMEDLF NextBio:908304 Uniprot:Q9GS00
Length = 601
Score = 268 (99.4 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 68/226 (30%), Positives = 114/226 (50%)
Query: 205 TPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGL 264
T L +AK A L L ++Y L++ + S + + D+ YG L
Sbjct: 306 TNRQLIETALAKCLAAQVLLKLRNKRYSQVVETILQIKTECLQS-KWFVTSSDLGIYGML 364
Query: 265 CALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLD 324
A+A+ RA+LK +V N FR LE P++ EL+ + SSR+ C + + ++K LLLD
Sbjct: 365 SAMATMSRADLKLQVSGNGTFRKLLESEPQLIELLGSYTSSRFGRCFEIMRSVKPRLLLD 424
Query: 325 IHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQA 384
+ +V+ L+++IR K ++QY P+ ++ + MA A S A ++ L LI +
Sbjct: 425 PFISRNVDELFEKIRQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQKHVSL 484
Query: 385 RIDSHNKILYARHADQR--NATFQRVLQTGSEFDQDVRAMLLRANL 428
+ID + I+ R D+R NA +RV T Q +++L + L
Sbjct: 485 KIDQNEGIV--RILDERDENAILKRVNVTCDRATQKAKSLLWKTTL 528
Score = 132 (51.5 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 45/184 (24%), Positives = 81/184 (44%)
Query: 30 ISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGEN------- 82
++ +D+E+ A Y R FIA HC I ++ +A + +K+
Sbjct: 79 VNESAIDIESLACSYDSNAFFLRARFIARHCPI--LRADAYISLINYLKEHTTDITHYVA 136
Query: 83 --TQLFREVVKKIDGRLGPNYAM---DEAWCDSVDRRAEQRKEKLENELNAYRTNLIKES 137
+L E+ +K N+ + D+ W + + ++L+ E ++ +KES
Sbjct: 137 FFNELESELARKEFKNRQLNFQIPLRDQKWIEENGATWQSTTDQLQAEYKRHKDEGVKES 196
Query: 138 IRMGYNDFGDFYYAHGALGDAFKSYVR-TRDYCTTSKHIIHMCMSAILVSI---EMGQFT 193
R D Y G + +A + Y R RDYCT KH I+M ++ + V+I + G+
Sbjct: 197 TRRAMEDLFQHYMMAGKIDEAIRLYSRGIRDYCTQLKHSINMWINWMEVAICANDWGKLD 256
Query: 194 HVTS 197
VT+
Sbjct: 257 TVTN 260
>UNIPROTKB|Q9GS00 [details] [associations]
symbol:csn-1 "COP9 signalosome complex subunit 1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0009792 GO:GO:0005737 GO:GO:0030154 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0040035
GO:GO:0008180 KO:K12175 InterPro:IPR019585 Pfam:PF10602
EMBL:AL132895 RefSeq:NP_507507.1 ProteinModelPortal:Q9GS00
DIP:DIP-26112N IntAct:Q9GS00 MINT:MINT-1040684 STRING:Q9GS00
PaxDb:Q9GS00 EnsemblMetazoa:Y59A8A.1.1 EnsemblMetazoa:Y59A8A.1.2
GeneID:180168 KEGG:cel:CELE_Y59A8A.1 UCSC:Y59A8A.1 CTD:180168
WormBase:Y59A8A.1 eggNOG:NOG325807 GeneTree:ENSGT00510000046608
HOGENOM:HOG000017865 InParanoid:Q9GS00 OMA:RAMEDLF NextBio:908304
Uniprot:Q9GS00
Length = 601
Score = 268 (99.4 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 68/226 (30%), Positives = 114/226 (50%)
Query: 205 TPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGL 264
T L +AK A L L ++Y L++ + S + + D+ YG L
Sbjct: 306 TNRQLIETALAKCLAAQVLLKLRNKRYSQVVETILQIKTECLQS-KWFVTSSDLGIYGML 364
Query: 265 CALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLD 324
A+A+ RA+LK +V N FR LE P++ EL+ + SSR+ C + + ++K LLLD
Sbjct: 365 SAMATMSRADLKLQVSGNGTFRKLLESEPQLIELLGSYTSSRFGRCFEIMRSVKPRLLLD 424
Query: 325 IHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQA 384
+ +V+ L+++IR K ++QY P+ ++ + MA A S A ++ L LI +
Sbjct: 425 PFISRNVDELFEKIRQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQKHVSL 484
Query: 385 RIDSHNKILYARHADQR--NATFQRVLQTGSEFDQDVRAMLLRANL 428
+ID + I+ R D+R NA +RV T Q +++L + L
Sbjct: 485 KIDQNEGIV--RILDERDENAILKRVNVTCDRATQKAKSLLWKTTL 528
Score = 132 (51.5 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 45/184 (24%), Positives = 81/184 (44%)
Query: 30 ISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGEN------- 82
++ +D+E+ A Y R FIA HC I ++ +A + +K+
Sbjct: 79 VNESAIDIESLACSYDSNAFFLRARFIARHCPI--LRADAYISLINYLKEHTTDITHYVA 136
Query: 83 --TQLFREVVKKIDGRLGPNYAM---DEAWCDSVDRRAEQRKEKLENELNAYRTNLIKES 137
+L E+ +K N+ + D+ W + + ++L+ E ++ +KES
Sbjct: 137 FFNELESELARKEFKNRQLNFQIPLRDQKWIEENGATWQSTTDQLQAEYKRHKDEGVKES 196
Query: 138 IRMGYNDFGDFYYAHGALGDAFKSYVR-TRDYCTTSKHIIHMCMSAILVSI---EMGQFT 193
R D Y G + +A + Y R RDYCT KH I+M ++ + V+I + G+
Sbjct: 197 TRRAMEDLFQHYMMAGKIDEAIRLYSRGIRDYCTQLKHSINMWINWMEVAICANDWGKLD 256
Query: 194 HVTS 197
VT+
Sbjct: 257 TVTN 260
>WB|WBGene00004463 [details] [associations]
symbol:rpn-7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0008340 GO:GO:0009792
GO:GO:0006915 GO:GO:0002119 GO:GO:0018996 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM EMBL:Z68227 PIR:T22413
RefSeq:NP_501632.1 ProteinModelPortal:Q20585 DIP:DIP-26993N
IntAct:Q20585 MINT:MINT-211626 STRING:Q20585 PaxDb:Q20585
EnsemblMetazoa:F49C12.8.1 EnsemblMetazoa:F49C12.8.2 GeneID:177753
KEGG:cel:CELE_F49C12.8 UCSC:F49C12.8 CTD:177753 WormBase:F49C12.8
InParanoid:Q20585 NextBio:898240 Uniprot:Q20585
Length = 410
Score = 248 (92.4 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 94/375 (25%), Positives = 173/375 (46%)
Query: 49 KITRLMFIADHCDIASMQLEA-LRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAW 107
++++ F+ +H ++ S EA L + IK+ + F E+V D ++ +D
Sbjct: 30 ELSQTRFMLNHPEVDSSVKEAKLEKLQETIKEFDMAP-FYELVCA-DFKI----VVDATQ 83
Query: 108 CDSVDRRAEQRK-EKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTR 166
++ + A Q+K +++ E+ NL + +R G ++Y G +A K+Y T
Sbjct: 84 LAAM-KAANQKKIDEITAEVEDAEKNLGESEVRQGLLRKFEYYCQIGDKDNALKAYTATY 142
Query: 167 DYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPE-ALEPVTIAKLRCAAGLAH 225
+ + I + + I V + + +++KA++ E + +LR L
Sbjct: 143 EKTVGMGYRIDVVFAMIRVGLFFLDHHLINKFITKAKELMEQGGDWERKNRLRSYEALYR 202
Query: 226 LEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNF 285
+ R + AA FLE P G SY E++ +++ Y + + DR +L++KVI
Sbjct: 203 MSVRDFAGAADLFLEAVPTFG-SY-ELMTYENLILYTVITTTFALDRPDLRTKVIRCNEV 260
Query: 286 RNFLE-------LVPEVRELINDFYSSRYASCLDYLGNLKANLL-LDIHLHDHVETLYDQ 337
+ L L+P VRE + +Y Y L L++ D +L H
Sbjct: 261 QEQLTGGGLNGTLIP-VREYLESYYDCHYDRFFIQLAALESERFKFDRYLSPHFNYYSRG 319
Query: 338 IRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARH 397
+R++A Q+ P+ +V + MMA F S A I++EL LI Q+Q RID+ N ++ H
Sbjct: 320 MRHRAYEQFLTPYKTVRIDMMAKDFGVSRAFIDRELHRLIATGQLQCRIDAVNGVIEVNH 379
Query: 398 ADQRNATFQRVLQTG 412
D +N ++ V++ G
Sbjct: 380 RDSKNHLYKAVIKDG 394
>DICTYBASE|DDB_G0270188 [details] [associations]
symbol:psmD6 "26S proteasome non-ATPase regulatory
subunit 6" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0270188 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0005198 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GO:GO:0006511 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 KO:K03037 OMA:YTVYVCM
RefSeq:XP_646606.1 ProteinModelPortal:Q55C75 STRING:Q55C75
PRIDE:Q55C75 EnsemblProtists:DDB0232985 GeneID:8617578
KEGG:ddi:DDB_G0270188 ProtClustDB:CLSZ2444089 Uniprot:Q55C75
Length = 382
Score = 215 (80.7 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 78/341 (22%), Positives = 152/341 (44%)
Query: 83 TQLFREVVKKIDG-RLGPNYAM--DEA-WCDS---VDR-RAEQRKE--KLENELNAYRTN 132
T+ + +++K+I+ ++ P Y + ++ W + V + +AE E L+N++ N
Sbjct: 28 TESYNKLIKEIETHKMLPLYKILVEQLKWTEDQGLVSKLKAENESELKALDNKITDSVEN 87
Query: 133 LIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQF 192
+ IR Y DFY G A + Y +T + + + + I + I
Sbjct: 88 FGESEIREAYLAKSDFYCRIGDKDTAVEMYRQTFEKTVPLGQKLDIVFTLIRMGIFWMDH 147
Query: 193 THVTSYVSKAEQ-TPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNE 251
VT + KA+ E + +L+ + + R++K A+ +LE ++ E
Sbjct: 148 DIVTRNLEKAQSLVEEGGDWDRKNRLKTYEAVYKMSIRQFKEASDLYLETVASFTST--E 205
Query: 252 VIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCL 311
I Y +L DR LK KVID+ + + + P++++L+ FY+ YA+
Sbjct: 206 FIDYSRFIQYLIFTSLLHLDRVSLKQKVIDSPDVLSVINDTPKLQDLLQSFYNGDYANFF 265
Query: 312 DYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEK 371
L + ++ D +L +H ++R A Q+ + SV L M+N F S I++
Sbjct: 266 GALAHFSDSIKGDRYLAEHSRFFTREMRILAYNQFLESYSSVKLESMSNQFGVSYDFIDR 325
Query: 372 ELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTG 412
EL + ++ +ID + ++ +D +N ++ LQ G
Sbjct: 326 ELSRFVAAGRLNCKIDKVSGVIETTRSDAKNHLYKTTLQQG 366
>TAIR|locus:2126798 [details] [associations]
symbol:AT4G24820 "AT4G24820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009735 "response to
cytokinin stimulus" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] [GO:0051302
"regulation of cell division" evidence=RCA] [GO:0051510 "regulation
of unidimensional cell growth" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] [GO:0051788 "response to misfolded
protein" evidence=RCA] [GO:0080129 "proteasome core complex
assembly" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0030163 GO:GO:0000502 EMBL:AL161562
EMBL:AL049657 eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602
EMBL:AY054500 EMBL:AY093269 EMBL:BT000653 EMBL:AY087847
IPI:IPI00520982 PIR:T06666 RefSeq:NP_567709.1 RefSeq:NP_974611.1
UniGene:At.3132 ProteinModelPortal:Q93Y35 IntAct:Q93Y35
STRING:Q93Y35 PaxDb:Q93Y35 PRIDE:Q93Y35 DNASU:828585
EnsemblPlants:AT4G24820.1 EnsemblPlants:AT4G24820.2 GeneID:828585
KEGG:ath:AT4G24820 TAIR:At4g24820 HOGENOM:HOG000214998
InParanoid:Q93Y35 KO:K03037 OMA:YTVYVCM PhylomeDB:Q93Y35
ProtClustDB:CLSN2689595 Genevestigator:Q93Y35 GermOnline:AT4G24820
Uniprot:Q93Y35
Length = 387
Score = 215 (80.7 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 70/316 (22%), Positives = 136/316 (43%)
Query: 103 MDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSY 162
+D++ +S+ E+ +KL+ ++ NL + +R + Y+ + D K+
Sbjct: 63 LDQSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKA-LYFIR--ISDKEKAL 119
Query: 163 VRTRDYCTTSKHI-IHMCMSAILVSIEMG----QFTHVTSYVSKAEQT-PEALEPVTIAK 216
+ + T K + + M + ++++ F V+ + KA++ E + +
Sbjct: 120 EQLK--LTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNR 177
Query: 217 LRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELK 276
L+ GL + R +K AA FL+ +Y E+ + Y L ++ + DR LK
Sbjct: 178 LKVYEGLYCMSTRNFKKAASLFLD-SISTFTTY-EIFPYETFIFYTVLTSIITLDRVSLK 235
Query: 277 SKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYD 336
KV+D L +P + E +N Y +Y + + + D +L+ H
Sbjct: 236 QKVVDAPEILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMR 295
Query: 337 QIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYAR 396
++R Q+ + SV + MA AF SV I++EL I ++ +ID +L
Sbjct: 296 EVRTVVYSQFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETN 355
Query: 397 HADQRNATFQRVLQTG 412
D +NA +Q ++ G
Sbjct: 356 RPDAKNALYQATIKQG 371
>UNIPROTKB|F1N903 [details] [associations]
symbol:PSMD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR019585 Pfam:PF10602
GeneTree:ENSGT00510000046608 OMA:YTVYVCM EMBL:AADN02014237
IPI:IPI00601017 Ensembl:ENSGALT00000011836 Uniprot:F1N903
Length = 398
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 72/313 (23%), Positives = 131/313 (41%)
Query: 101 YAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFK 160
+ +D + + + E+ ++L+NEL L + IR ++ G A
Sbjct: 72 WQIDTELLNKMKKANEEELKRLDNELEDAEKILGESEIRDAMMAKAEYLCRIGDKEGALT 131
Query: 161 SYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT-PEALEPVTIAKLRC 219
++ +T D H + + + + + +T + KA+ E + +L+
Sbjct: 132 AFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNIEKAKSLIEEGGDWDRRNRLKV 191
Query: 220 AAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKV 279
GL + R +K AA FL+ SY E++ + TY ++ + DR +L+ KV
Sbjct: 192 YQGLYCVAIRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVTYTVYVSMIALDRPDLREKV 249
Query: 280 IDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIR 339
I L +P VR+ + Y RYA+ L ++ + D H ++R
Sbjct: 250 IKGAEILEVLHSLPAVRQYLFSLYECRYAAFFQSLAIVEQEMKKDWLFAPHYRYYVREMR 309
Query: 340 NKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHAD 399
A Q + S+ L MA AF SV I++EL I ++ +ID N+I+ D
Sbjct: 310 IHAYSQLLESYRSLTLGYMAEAFGVSVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD 369
Query: 400 QRNATFQRVLQTG 412
+N +Q ++ G
Sbjct: 370 SKNWQYQETIKKG 382
>TAIR|locus:2087745 [details] [associations]
symbol:AT3G12850 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002686 IPI:IPI00520509
RefSeq:NP_187891.1 UniGene:At.53282 ProteinModelPortal:F4JAZ8
EnsemblPlants:AT3G12850.1 GeneID:820467 KEGG:ath:AT3G12850
Uniprot:F4JAZ8
Length = 367
Score = 180 (68.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 61/210 (29%), Positives = 100/210 (47%)
Query: 35 LDVEAYASLYQGRTKITRLMFIADHCDIASM-----QLEALRMAYDEIKKGE---NTQLF 86
LDVEAY+ Y+GR + RL+ IA++ + M +LEALR+AYD I+ + +LF
Sbjct: 11 LDVEAYSRNYEGRNLVLRLLHIAEN-SVGPMFTDDLELEALRLAYDLIRNDGIVCDMRLF 69
Query: 87 REVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFG 146
+ +KI GRLG Y +DE W + + ++ L N+L + L K+ R+ +
Sbjct: 70 TVIAEKIQGRLGEGYLLDEKWRLTKNNNFVKQDSILRNDLESATDELEKD--RLALRQYW 127
Query: 147 DFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTP 206
Y+ G + F+ Y R I M+ +LV++E F + EQ
Sbjct: 128 LHYHC-GQMAIVFRPYPR-------QVQTIDAYMATLLVALETRNFGELPH--RSVEQIA 177
Query: 207 EA-LEPVTIAKLRCAAGLAHLEARKYKLAA 235
++ K+ C L++L KY++ A
Sbjct: 178 YCNVKRAYGFKIDCFKSLSNLLESKYQVTA 207
Score = 73 (30.8 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 297 ELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRN 340
++I + + C+ L + LLLD +L DHV+ L +R+
Sbjct: 241 DVIKKLLAGHFTDCMTLLEKQRPRLLLDFYLRDHVDNLLSMMRD 284
>SGD|S000006312 [details] [associations]
symbol:RPN7 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0005198
"structural molecule activity" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF01399 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00088
SGD:S000006312 GO:GO:0005634 GO:GO:0005198 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:BK006949 Gene3D:1.25.40.10 GO:GO:0008541
GO:GO:0006511 EMBL:U32445 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 PDB:4B4T PDBsum:4B4T
HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM OrthoDB:EOG40S3QF
EMBL:AY692769 PIR:S59773 RefSeq:NP_015433.1
ProteinModelPortal:Q06103 DIP:DIP-2880N IntAct:Q06103
MINT:MINT-531082 STRING:Q06103 PaxDb:Q06103 PeptideAtlas:Q06103
EnsemblFungi:YPR108W GeneID:856223 KEGG:sce:YPR108W NextBio:981456
Genevestigator:Q06103 GermOnline:YPR108W Uniprot:Q06103
Length = 429
Score = 203 (76.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 55/196 (28%), Positives = 97/196 (49%)
Query: 222 GLAHLEARKYKLAARKFLEVGPDLGNSYN-EVIAAQDVATYGGLCALASFDRAELKSKVI 280
G+ L R +K AA+ ++ L + E+ + + +ATY + L + +R +LKSKVI
Sbjct: 215 GIHCLAVRNFKEAAKLLVD---SLATFTSIELTSYESIATYASVTGLFTLERTDLKSKVI 271
Query: 281 DNVNFRNFLEL---VPEVRELINDFYSSRYASCLDYLGNLKANLLLDI-HLHDHVETLYD 336
D+ + + + + L Y+S YAS YL AN+L+ +L+ H +
Sbjct: 272 DSPELLSLISTTAALQSISSLTISLYASDYASYFPYLLETYANVLIPCKYLNRHADFFVR 331
Query: 337 QIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYAR 396
++R K Q + ++ L MA+AF SVA ++ +L I + Q+ ID N I+
Sbjct: 332 EMRRKVYAQLLESYKTLSLKSMASAFGVSVAFLDNDLGKFIPNKQLNCVIDRVNGIVETN 391
Query: 397 HADQRNATFQRVLQTG 412
D +NA + +++ G
Sbjct: 392 RPDNKNAQYHLLVKQG 407
>UNIPROTKB|F1MXE4 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
OMA:YTVYVCM IPI:IPI00697833 UniGene:Bt.3193 EMBL:DAAA02054147
Ensembl:ENSBTAT00000020108 Uniprot:F1MXE4
Length = 389
Score = 200 (75.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 70/313 (22%), Positives = 127/313 (40%)
Query: 101 YAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFK 160
+ MD + + + E ++L+ EL NL + IR ++ G A
Sbjct: 63 WQMDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALT 122
Query: 161 SYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT-PEALEPVTIAKLRC 219
++ RT D H + + + + + +T KA+ E + +L+
Sbjct: 123 AFRRTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKV 182
Query: 220 AAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKV 279
GL + R +K AA FL+ SY E++ + TY ++ + +R +L+ KV
Sbjct: 183 YQGLYCVAIRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVTYTVYVSMIALERPDLREKV 240
Query: 280 IDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIR 339
I L +P VR+ + Y RY+ L ++ + D H ++R
Sbjct: 241 IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMR 300
Query: 340 NKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHAD 399
A Q + S+ L MA AF V I++EL I ++ +ID N+++ D
Sbjct: 301 IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEVVETNRPD 360
Query: 400 QRNATFQRVLQTG 412
+N +Q ++ G
Sbjct: 361 SKNWQYQETIKKG 373
>UNIPROTKB|Q3T0B2 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GO:GO:0022624 HOGENOM:HOG000214998
KO:K03037 EMBL:BC102468 IPI:IPI00697833 RefSeq:NP_001029821.1
UniGene:Bt.3193 ProteinModelPortal:Q3T0B2 STRING:Q3T0B2
PRIDE:Q3T0B2 GeneID:538625 KEGG:bta:538625 CTD:9861
HOVERGEN:HBG023924 InParanoid:Q3T0B2 OrthoDB:EOG4DV5MB
NextBio:20877481 Uniprot:Q3T0B2
Length = 389
Score = 200 (75.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 70/313 (22%), Positives = 127/313 (40%)
Query: 101 YAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFK 160
+ MD + + + E ++L+ EL NL + IR ++ G A
Sbjct: 63 WQMDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALT 122
Query: 161 SYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT-PEALEPVTIAKLRC 219
++ RT D H + + + + + +T KA+ E + +L+
Sbjct: 123 AFRRTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKV 182
Query: 220 AAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKV 279
GL + R +K AA FL+ SY E++ + TY ++ + +R +L+ KV
Sbjct: 183 YQGLYCVAIRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVTYTVYVSMIALERPDLREKV 240
Query: 280 IDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIR 339
I L +P VR+ + Y RY+ L ++ + D H ++R
Sbjct: 241 IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMR 300
Query: 340 NKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHAD 399
A Q + S+ L MA AF V I++EL I ++ +ID N+++ D
Sbjct: 301 IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEVVETNRPD 360
Query: 400 QRNATFQRVLQTG 412
+N +Q ++ G
Sbjct: 361 SKNWQYQETIKKG 373
>RGD|735127 [details] [associations]
symbol:Psmd6 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 6" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=IEA;ISO] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 RGD:735127 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 HOGENOM:HOG000214998
KO:K03037 OMA:YTVYVCM CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB
EMBL:CH474010 EMBL:BC059159 IPI:IPI00189463 RefSeq:NP_942025.1
UniGene:Rn.103875 IntAct:Q6PCT9 STRING:Q6PCT9
Ensembl:ENSRNOT00000009249 GeneID:289924 KEGG:rno:289924
InParanoid:Q6PCT9 NextBio:630485 Genevestigator:Q6PCT9
Uniprot:Q6PCT9
Length = 389
Score = 200 (75.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 70/314 (22%), Positives = 128/314 (40%)
Query: 100 NYAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAF 159
++ MD + + E+ ++L+ EL NL + IR ++ G A
Sbjct: 62 DWQMDMDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGAL 121
Query: 160 KSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT-PEALEPVTIAKLR 218
++ +T D H + + + + + +T KA+ E + +L+
Sbjct: 122 TAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLK 181
Query: 219 CAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSK 278
GL + R +K AA FL+ SY E++ + TY ++ + +R +L+ K
Sbjct: 182 VYQGLYCVAIRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVTYTVYVSMIALERPDLREK 239
Query: 279 VIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQI 338
VI L +P VR+ + Y RY+ L ++ + D H ++
Sbjct: 240 VIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREM 299
Query: 339 RNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHA 398
R A Q + S+ L MA AF V I++EL I ++ +ID N+I+
Sbjct: 300 RIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRP 359
Query: 399 DQRNATFQRVLQTG 412
D +N +Q ++ G
Sbjct: 360 DSKNWQYQETIKKG 373
>MGI|MGI:1913663 [details] [associations]
symbol:Psmd6 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 6" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1913663 Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
GO:GO:0022624 HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM CTD:9861
HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB EMBL:AJ252147 EMBL:AK010287
EMBL:BC006869 IPI:IPI00319965 RefSeq:NP_079826.2 UniGene:Mm.27591
ProteinModelPortal:Q99JI4 IntAct:Q99JI4 STRING:Q99JI4
PhosphoSite:Q99JI4 PaxDb:Q99JI4 PRIDE:Q99JI4 DNASU:66413
Ensembl:ENSMUST00000022256 GeneID:66413 KEGG:mmu:66413
UCSC:uc007sgj.1 InParanoid:Q99JI4 NextBio:321623 Bgee:Q99JI4
Genevestigator:Q99JI4 GermOnline:ENSMUSG00000021737 Uniprot:Q99JI4
Length = 389
Score = 199 (75.1 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 70/314 (22%), Positives = 128/314 (40%)
Query: 100 NYAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAF 159
++ MD + + E+ ++L+ EL NL + IR ++ G A
Sbjct: 62 DWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGAL 121
Query: 160 KSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT-PEALEPVTIAKLR 218
++ +T D H + + + + + +T KA+ E + +L+
Sbjct: 122 TAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLK 181
Query: 219 CAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSK 278
GL + R +K AA FL+ SY E++ + TY ++ + +R +L+ K
Sbjct: 182 VYQGLYCVAIRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVTYTVYVSMIALERPDLREK 239
Query: 279 VIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQI 338
VI L +P VR+ + Y RY+ L ++ + D H ++
Sbjct: 240 VIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREM 299
Query: 339 RNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHA 398
R A Q + S+ L MA AF V I++EL I ++ +ID N+I+
Sbjct: 300 RIHAYSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNEIVETNRP 359
Query: 399 DQRNATFQRVLQTG 412
D +N +Q ++ G
Sbjct: 360 DSKNWQYQETIKKG 373
>UNIPROTKB|E2RN00 [details] [associations]
symbol:PSMD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AAEX03012146
Ensembl:ENSCAFT00000011009 OMA:HRARESH NextBio:20858788
Uniprot:E2RN00
Length = 516
Score = 200 (75.5 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 78/332 (23%), Positives = 134/332 (40%)
Query: 94 DGRLGPNYAMDEAWCDSVD-----------RRA-EQRKEKLENELNAYRTNLIKESIRMG 141
D + P Y EA C S+D R+A E ++L+ EL NL + IR
Sbjct: 174 DNNMAPYY---EALCKSLDWQLDTDLLNKMRKANEDELKRLDEELEDAEKNLGESEIRDA 230
Query: 142 YNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSK 201
++ G A ++ +T D H + + + + + +T K
Sbjct: 231 MMAKAEYLCRVGDKDGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEK 290
Query: 202 AEQT-PEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVAT 260
A+ E + +L+ GL + R +K AA FL+ SY E++ + T
Sbjct: 291 AKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVT 348
Query: 261 YGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKAN 320
Y ++ + +R +L+ KVI L +P VR+ + Y RY+ L ++
Sbjct: 349 YTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQE 408
Query: 321 LLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDN 380
+ D H ++R A Q + S+ L MA AF V I++EL I
Sbjct: 409 MKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAG 468
Query: 381 QIQARIDSHNKILYARHADQRNATFQRVLQTG 412
++ +ID N+I+ D +N +Q ++ G
Sbjct: 469 RLHCKIDKVNEIVETNRPDSKNWQYQETIKKG 500
>ZFIN|ZDB-GENE-040426-1038 [details] [associations]
symbol:psmd6 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 6" species:7955 "Danio rerio" [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0070306 "lens fiber cell differentiation"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040426-1038 GO:GO:0043161 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GO:GO:0070306 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037
CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB EMBL:BC049452
EMBL:BC153637 IPI:IPI00501573 RefSeq:NP_956585.1 UniGene:Dr.84195
STRING:Q7ZWE5 GeneID:393261 KEGG:dre:393261 InParanoid:Q7ZWE5
NextBio:20814320 Uniprot:Q7ZWE5
Length = 386
Score = 197 (74.4 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 78/365 (21%), Positives = 143/365 (39%)
Query: 49 KITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAWC 108
+I +L F+ H A ++ E + D IK + + K++ + D
Sbjct: 18 RIAQLKFLLTHRQDAQVKSELM----DAIKLNNMAPYYETLCKEL------KWQADTDLL 67
Query: 109 DSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDY 168
+ + E ++L++ L NL + IR ++ G A ++ +T D
Sbjct: 68 SKMKKANEDELKRLDDVLEDAEKNLGESEIRDAMMAKAEYLIRIGDKEGALTAFRKTYDK 127
Query: 169 CTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT-PEALEPVTIAKLRCAAGLAHLE 227
H + + + + + +T KA+ E + +L+ GL +
Sbjct: 128 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVA 187
Query: 228 ARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRN 287
R +K AA FL+ SY E++ + TY + + R +L+ KVI
Sbjct: 188 IRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVTYTVYVCMIALKRPDLREKVIKGAEILE 245
Query: 288 FLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYT 347
L +P VR+ + Y RY+ L ++ + D H ++R A Q
Sbjct: 246 VLHSLPAVRQYLFSLYECRYSVFFQSLARVEQEMKQDWLFAPHYRYYVREMRILAYSQLL 305
Query: 348 HPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQR 407
+ S+ L MA AF S I++EL I ++ +ID N+I+ D +N +Q
Sbjct: 306 ESYRSLTLGYMAEAFGVSTEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQE 365
Query: 408 VLQTG 412
++ G
Sbjct: 366 TIKKG 370
>UNIPROTKB|Q6UV22 [details] [associations]
symbol:PSMD6 "KIAA0107 isoform" species:9606 "Homo sapiens"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 EMBL:CH471055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 EMBL:AC012557 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 HOVERGEN:HBG023924
OrthoDB:EOG4DV5MB UniGene:Hs.152536 GeneID:9861 HGNC:HGNC:9564
ChiTaRS:PSMD6 EMBL:AY359879 IPI:IPI00794383 RefSeq:NP_001258709.1
STRING:Q6UV22 Ensembl:ENST00000394431 UCSC:uc003dmd.1
Uniprot:Q6UV22
Length = 351
Score = 195 (73.7 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 69/314 (21%), Positives = 128/314 (40%)
Query: 100 NYAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAF 159
++ +D + + + E ++L+ EL NL + IR ++ G A
Sbjct: 24 DWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGAL 83
Query: 160 KSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT-PEALEPVTIAKLR 218
++ +T D H + + + + + +T KA+ E + +L+
Sbjct: 84 TAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLK 143
Query: 219 CAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSK 278
GL + R +K AA FL+ SY E++ + TY ++ + +R +L+ K
Sbjct: 144 VYQGLYCVAIRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVTYTVYVSMIALERPDLREK 201
Query: 279 VIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQI 338
VI L +P VR+ + Y RY+ L ++ + D H ++
Sbjct: 202 VIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREM 261
Query: 339 RNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHA 398
R A Q + S+ L MA AF V I++EL I ++ +ID N+I+
Sbjct: 262 RIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRP 321
Query: 399 DQRNATFQRVLQTG 412
D +N +Q ++ G
Sbjct: 322 DSKNWQYQETIKKG 335
>UNIPROTKB|Q15008 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9606 "Homo sapiens" [GO:0006508 "proteolysis"
evidence=NAS] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0016887 "ATPase activity" evidence=NAS] [GO:0022624 "proteasome
accessory complex" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=NAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 EMBL:CH471055 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GO:GO:0022624 HOGENOM:HOG000214998
KO:K03037 CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB
EMBL:AF215935 EMBL:AF530062 EMBL:AY568086 EMBL:D14663 EMBL:AK290205
EMBL:BC000630 EMBL:BC000904 EMBL:BC012369 IPI:IPI00014151
RefSeq:NP_055629.1 UniGene:Hs.152536 ProteinModelPortal:Q15008
DIP:DIP-27590N IntAct:Q15008 MINT:MINT-5004632 STRING:Q15008
PhosphoSite:Q15008 DMDM:2494625 PaxDb:Q15008 PRIDE:Q15008
Ensembl:ENST00000295901 GeneID:9861 KEGG:hsa:9861 UCSC:uc003dlz.1
GeneCards:GC03M063973 HGNC:HGNC:9564 HPA:HPA036922
neXtProt:NX_Q15008 PharmGKB:PA33910 InParanoid:Q15008
PhylomeDB:Q15008 ChiTaRS:PSMD6 GenomeRNAi:9861 NextBio:37172
ArrayExpress:Q15008 Bgee:Q15008 CleanEx:HS_PSMD6
Genevestigator:Q15008 GermOnline:ENSG00000163636 Uniprot:Q15008
Length = 389
Score = 196 (74.1 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 77/332 (23%), Positives = 134/332 (40%)
Query: 94 DGRLGPNYAMDEAWCDSVD-----------RRA-EQRKEKLENELNAYRTNLIKESIRMG 141
D + P Y EA C S+D ++A E ++L+ EL NL + IR
Sbjct: 47 DNNMAPYY---EALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDA 103
Query: 142 YNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSK 201
++ G A ++ +T D H + + + + + +T K
Sbjct: 104 MMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEK 163
Query: 202 AEQT-PEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVAT 260
A+ E + +L+ GL + R +K AA FL+ SY E++ + T
Sbjct: 164 AKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVT 221
Query: 261 YGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKAN 320
Y ++ + +R +L+ KVI L +P VR+ + Y RY+ L ++
Sbjct: 222 YTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQE 281
Query: 321 LLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDN 380
+ D H ++R A Q + S+ L MA AF V I++EL I
Sbjct: 282 MKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAG 341
Query: 381 QIQARIDSHNKILYARHADQRNATFQRVLQTG 412
++ +ID N+I+ D +N +Q ++ G
Sbjct: 342 RLHCKIDKVNEIVETNRPDSKNWQYQETIKKG 373
>GENEDB_PFALCIPARUM|PF11_0303 [details] [associations]
symbol:PF11_0303 "26S proteasome regulatory
complex subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 EMBL:AE014186
InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037
ProtClustDB:CLSZ2444089 RefSeq:XP_001347974.2
ProteinModelPortal:Q8II71 IntAct:Q8II71 MINT:MINT-1646226
PRIDE:Q8II71 EnsemblProtists:PF11_0303:mRNA GeneID:810850
KEGG:pfa:PF11_0303 EuPathDB:PlasmoDB:PF3D7_1129200 Uniprot:Q8II71
Length = 393
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 69/349 (19%), Positives = 149/349 (42%)
Query: 68 EALRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRKEKLENELN 127
+ L+ +DEIKK + + +++ N DE + S+ +A++ ++EN+L+
Sbjct: 40 DLLQSLFDEIKKNHMYPYYNYICQEL------NLNFDEEYFKSLKEKADEELNQIENKLS 93
Query: 128 AYRTNLIKESIRMGYNDF---GDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAIL 184
N +S+ ND +F+ +AFK Y T + + ++ I
Sbjct: 94 ESAENF--DSLD-NKNDVLLKANFFCKISDKENAFKEYEETYKKGIGMGMKLDILLTMIR 150
Query: 185 VSIEMGQFTHVTSYVSKAE-QTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGP 243
+ I ++ Y+ +A Q + + KL+ L ++ R + A++ ++
Sbjct: 151 ICIFYNDVKNLKKYLEQARTQMEKGGDWERKNKLKIYEALNYIMIRNFAEASKILIDAAS 210
Query: 244 DLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFY 303
+ E+I+ + + Y + + + +R L K++++ ++ ++ FY
Sbjct: 211 TF--TATEIISYEKIIFYVVILGIMTEERTVLDKKILNSSVILQITSSDEDLHTYLHSFY 268
Query: 304 SSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFK 363
Y + ++ + + D +L H R +A Q+ PF +V L MA AF
Sbjct: 269 HCDYRTFMEKTIKIAMRVKRDRYLGRHYRYFIRNTRVRAYKQFLEPFKNVTLKNMAFAFG 328
Query: 364 TSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTG 412
S IE E+ + I + ++ +ID N + + ++RN +Q ++ G
Sbjct: 329 VSEEFIENEISSFIANGKLNCKIDKVNGSIESNQPNERNTMYQNTIKKG 377
>UNIPROTKB|C9IZE4 [details] [associations]
symbol:PSMD6 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 6, isoform CRA_b" species:9606 "Homo sapiens"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 EMBL:CH471055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 EMBL:AC012557 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 OMA:YTVYVCM OrthoDB:EOG4DV5MB
UniGene:Hs.152536 GeneID:9861 HGNC:HGNC:9564 ChiTaRS:PSMD6
IPI:IPI00793381 RefSeq:NP_001258708.1 STRING:C9IZE4
Ensembl:ENST00000492933 UCSC:uc003dmb.1 Uniprot:C9IZE4
Length = 442
Score = 195 (73.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 69/314 (21%), Positives = 128/314 (40%)
Query: 100 NYAMDEAWCDSVDRRAEQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAF 159
++ +D + + + E ++L+ EL NL + IR ++ G A
Sbjct: 115 DWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGAL 174
Query: 160 KSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT-PEALEPVTIAKLR 218
++ +T D H + + + + + +T KA+ E + +L+
Sbjct: 175 TAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLK 234
Query: 219 CAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSK 278
GL + R +K AA FL+ SY E++ + TY ++ + +R +L+ K
Sbjct: 235 VYQGLYCVAIRDFKQAAELFLDTVSTF-TSY-ELMDYKTFVTYTVYVSMIALERPDLREK 292
Query: 279 VIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQI 338
VI L +P VR+ + Y RY+ L ++ + D H ++
Sbjct: 293 VIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREM 352
Query: 339 RNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHA 398
R A Q + S+ L MA AF V I++EL I ++ +ID N+I+
Sbjct: 353 RIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRP 412
Query: 399 DQRNATFQRVLQTG 412
D +N +Q ++ G
Sbjct: 413 DSKNWQYQETIKKG 426
>FB|FBgn0028688 [details] [associations]
symbol:Rpn7 "Regulatory particle non-ATPase 7" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;NAS;IDA] [GO:0006508
"proteolysis" evidence=ISS;NAS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 EMBL:AE014297
GO:GO:0022008 GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0004175 GO:GO:0008541 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 BRENDA:3.4.25.1 KO:K03037
EMBL:AF145308 EMBL:AY052008 RefSeq:NP_651048.1 UniGene:Dm.3424
ProteinModelPortal:Q9V3G7 DIP:DIP-23841N IntAct:Q9V3G7
MINT:MINT-845287 STRING:Q9V3G7 PaxDb:Q9V3G7 PRIDE:Q9V3G7
EnsemblMetazoa:FBtr0084294 GeneID:42641 KEGG:dme:Dmel_CG5378
UCSC:CG5378-RA CTD:42641 FlyBase:FBgn0028688 InParanoid:Q9V3G7
OMA:PWYEHIC OrthoDB:EOG4XPNXD PhylomeDB:Q9V3G7 GenomeRNAi:42641
NextBio:829829 Bgee:Q9V3G7 GermOnline:CG5378 Uniprot:Q9V3G7
Length = 389
Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 83/384 (21%), Positives = 163/384 (42%)
Query: 33 EQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFREVVKK 92
E+ +E +L +TK L+ +A++ A+++ + L E + EN + E
Sbjct: 7 EEQGLEKNPNLELAQTKF--LLTLAEYKQDAALKAKLL-----EAIRTENMAPWYE---H 56
Query: 93 IDGRLGPNYAMDEAWCDSVDRRAEQRK---EKLENELNAYRTNLIKESIRMGYNDFGDFY 149
I LG + +D+ D + R E + E+L+ + NL + +R ++
Sbjct: 57 ICSELG--WTVDK---DLLARMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYL 111
Query: 150 YAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT-PEA 208
G A ++ +T + + H + + I + + +T + KA+ E
Sbjct: 112 CRIGDKAAAETAFRKTYEKTVSLGHRLDIVFHLIRLGLFYLDHDLITRNIDKAKYLIEEG 171
Query: 209 LEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALA 268
+ +L+ G+ + R +K AA FL+ SY E++ Y A+
Sbjct: 172 GDWDRRNRLKVYQGVYSVAVRDFKAAATFFLDTVSTF-TSY-ELMDYPTFVRYTVYVAMI 229
Query: 269 SFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLH 328
+ R EL+ KVI + L +P+V++ + Y+ +Y + +L ++ L LD +H
Sbjct: 230 ALPRNELRDKVIKGSEIQEVLHGLPDVKQFLFSLYNCQYENFYVHLAGVEKQLRLDYLIH 289
Query: 329 DHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDS 388
H ++R Q + S+ L MA +F +V I++EL I ++ A++D
Sbjct: 290 PHYRYYVREMRILGYTQLLESYRSLTLQYMAESFGVTVEYIDQELARFIAAGRLHAKVDR 349
Query: 389 HNKILYARHADQRNATFQRVLQTG 412
I+ D +N +Q ++ G
Sbjct: 350 VGGIVETNRPDNKNWQYQATIKQG 373
>UNIPROTKB|J3KTB0 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR019585 Pfam:PF10602 EMBL:AC135056 HGNC:HGNC:4549
ChiTaRS:GPS1 Ensembl:ENST00000581418 Uniprot:J3KTB0
Length = 139
Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 39/122 (31%), Positives = 67/122 (54%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YA+ Y G +I RL FIADHC ++++EAL+MA +++ N ++ E
Sbjct: 20 VVENPSLDLEQYAASYSGLMRIERLQFIADHCP--TLRVEALKMALSFVQRTFNVDMYEE 77
Query: 89 VVKKIDGRL-----GPNY---------AMDEAWCDSVDRRAEQRKEKLENELNAYRTNLI 134
+ +K+ P+ A+D AW ++ ++A + EKL+ +L Y+ N I
Sbjct: 78 IHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSI 137
Query: 135 KE 136
KE
Sbjct: 138 KE 139
>POMBASE|SPBC582.07c [details] [associations]
symbol:rpn7 "19S proteasome regulatory subunit Rpn7"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0031144 "proteasome
localization" evidence=IGI] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0043248 "proteasome
assembly" evidence=IGI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 PomBase:SPBC582.07c GO:GO:0005829 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 Gene3D:1.10.10.10 InterPro:IPR011991
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0043248
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 GO:GO:0031144
GO:GO:0008540 GO:GO:0031595 HOGENOM:HOG000214998 KO:K03037
OMA:YTVYVCM EMBL:D89258 PIR:T37976 PIR:T43183 RefSeq:NP_595175.1
ProteinModelPortal:Q10335 STRING:Q10335 EnsemblFungi:SPBC582.07c.1
GeneID:2540794 KEGG:spo:SPBC582.07c OrthoDB:EOG40S3QF
NextBio:20801912 Uniprot:Q10335
Length = 409
Score = 181 (68.8 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 49/201 (24%), Positives = 94/201 (46%)
Query: 216 KLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAEL 275
+L+ G+ + R + AA L+ ++ E++ DV Y + S DR ++
Sbjct: 190 RLKAYQGIYLMSIRNFSGAADLLLDCMSTFSST--ELLPYYDVVRYAVISGAISLDRVDV 247
Query: 276 KSKVIDNVNFRNFL---ELVPEVRELINDFYSSRYASCLDYLGNLKAN-LLLDIHLHDHV 331
K+K++D+ L E + + IN Y Y+ L +++ N L D L H
Sbjct: 248 KTKIVDSPEVLAVLPQNESMSSLEACINSLYLCDYSGFFRTLADVEVNHLKCDQFLVAHY 307
Query: 332 ETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNK 391
++R +A Q + ++ + MA +F SV I+++L + I DN++ ID N
Sbjct: 308 RYYVREMRRRAYAQLLESYRALSIDSMAASFGVSVDYIDRDLASFIPDNKLNCVIDRVNG 367
Query: 392 ILYARHADQRNATFQRVLQTG 412
+++ D++N +Q V++ G
Sbjct: 368 VVFTNRPDEKNRQYQEVVKQG 388
>UNIPROTKB|J3QS88 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
EMBL:AC135056 HGNC:HGNC:4549 ChiTaRS:GPS1 Ensembl:ENST00000582327
Uniprot:J3QS88
Length = 134
Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/116 (30%), Positives = 63/116 (54%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YA+ Y G +I RL FIADHC ++++EAL+MA +++ N ++ E
Sbjct: 20 VVENPSLDLEQYAASYSGLMRIERLQFIADHCP--TLRVEALKMALSFVQRTFNVDMYEE 77
Query: 89 VVKKIDGRL-----GPNY---------AMDEAWCDSVDRRAEQRKEKLENELNAYR 130
+ +K+ P+ A+D AW ++ ++A + EKL+ +L Y+
Sbjct: 78 IHRKLSEATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYK 133
>CGD|CAL0003998 [details] [associations]
symbol:RPN7 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0031595 "nuclear proteasome complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0031144 "proteasome localization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF01399 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00088 CGD:CAL0003998 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 EMBL:AACQ01000069
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998
KO:K03037 RefSeq:XP_716421.1 ProteinModelPortal:Q5A421
STRING:Q5A421 GeneID:3641909 KEGG:cal:CaO19.7286 Uniprot:Q5A421
Length = 400
Score = 161 (61.7 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 49/192 (25%), Positives = 85/192 (44%)
Query: 231 YKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGL--CALA----SFDRAELKSKVIDNVN 284
Y LA R F E L +S + ++ +Y + CA+ S +R +LK+K+ID+
Sbjct: 187 YMLATRNFAEAAKLLIDSL-ATFTSTELCSYEAIAHCAIVAGVLSLERVDLKNKIIDSPE 245
Query: 285 FRNFLELVPEVRELIN---DFYSSRYASCLDYLGNLKANLLL-DIHLHDHVETLYDQIRN 340
+ P + L+N Y+ Y YL LLL + +L+ H ++R
Sbjct: 246 ILSIASTTPNLEPLLNLTNSLYTCEYNCFFQYLLESYEKLLLPNKYLYKHANFFLREMRC 305
Query: 341 KALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQ 400
KA Q + S+ L MA F S ++++L I + ++ ID N I+ D
Sbjct: 306 KAYNQLLESYKSLSLKSMATNFNISEEFLDQDLCKFIPNKKLNCTIDKVNGIIETNRPDN 365
Query: 401 RNATFQRVLQTG 412
+N + +++ G
Sbjct: 366 KNNQYHALIKQG 377
>UNIPROTKB|J3QL53 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
EMBL:AC135056 HGNC:HGNC:4549 ChiTaRS:GPS1 Ensembl:ENST00000583961
Uniprot:J3QL53
Length = 168
Score = 130 (50.8 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 29 IISGEQLDVEAYASLYQGRTKITRLMFIADHCDIASMQLEALRMAYDEIKKGENTQLFRE 88
++ LD+E YA+ Y G +I RL FIADHC ++++EAL+MA +++ N ++ E
Sbjct: 76 VVENPSLDLEQYAASYSGLMRIERLQFIADHCP--TLRVEALKMALSFVQRTFNVDMYEE 133
Query: 89 VVKKI 93
+ +K+
Sbjct: 134 IHRKL 138
>ASPGD|ASPL0000043868 [details] [associations]
symbol:AN1922 species:162425 "Emericella nidulans"
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IEA] [GO:0043248 "proteasome
assembly" evidence=IEA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031144 "proteasome
localization" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:BN001307 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0000502 EMBL:AACD01000029 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037 OrthoDB:EOG40S3QF
RefSeq:XP_659526.1 ProteinModelPortal:Q5BC08 STRING:Q5BC08
EnsemblFungi:CADANIAT00008582 GeneID:2874584 KEGG:ani:AN1922.2
OMA:FTSYELC Uniprot:Q5BC08
Length = 484
Score = 119 (46.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 32/127 (25%), Positives = 63/127 (49%)
Query: 287 NFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLL-DIHLHDHVETLYDQIRNKALIQ 345
N ++ P + L++ Y+ Y + L ++ + L D +L++H ++R +A Q
Sbjct: 337 NPIDFTP-LSNLVSSLYNGNYRTFFLALAAVEDHFLTQDRYLYEHRAWFVREMRLRAYQQ 395
Query: 346 YTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATF 405
+ V L+ MAN F +V ++++L I++N+I ID N I+ D +N +
Sbjct: 396 LLQSYRVVGLNSMANDFGVTVDYLDRDLARFISNNRIACTIDRVNGIIETNRPDDKNKQY 455
Query: 406 QRVLQTG 412
V++ G
Sbjct: 456 ADVVKHG 462
Score = 78 (32.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 53/206 (25%), Positives = 86/206 (41%)
Query: 82 NTQLFREVVKKIDGRLGPNYAMDEAWCDSV--DRR---AEQRKEKLENELNAYRTNLIKE 136
+T R + +KID + DEA S+ D R AE +KE+ E E A T + +
Sbjct: 83 STLASRRLSQKID------FPWDEALYQSLVEDNRKELAEFQKEEDEAEEAAGDTEV--Q 134
Query: 137 SIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVT 196
+ R G +F+ G A +S+ + T I + ++ I + + G +V
Sbjct: 135 AAR-GKR--AEFWARVGDKDKAIESHETLLEKTTFLGSKIDLVLAMIRIGLFFGDTLYVK 191
Query: 197 SYVSKAEQTPEALEPVTIA-KLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAA 255
+ +AE E+ +L+ GL L R Y AA L+ SY E+ +
Sbjct: 192 KNIERAEGLIESGGDWDRRNRLKAYKGLHLLTVRSYSAAAPLLLD-SLSTFTSY-ELCSY 249
Query: 256 QDVATYGGLCALASFDRAELKSKVID 281
+ Y L S R + K+KV+D
Sbjct: 250 SALVIYAVLAGSLSLKRVDFKAKVVD 275
>FB|FBgn0013746 [details] [associations]
symbol:alien "alien" species:7227 "Drosophila melanogaster"
[GO:0008231 "repressor ecdysone receptor complex" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IPI] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008180 "signalosome" evidence=NAS;IPI] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
GO:GO:0003714 GO:GO:0045892 GO:GO:0007095 GO:GO:0050821
GO:GO:0006911 EMBL:AE014134 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0008180 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 EMBL:AF129079
EMBL:AY069836 EMBL:AY118505 EMBL:U57758 RefSeq:NP_523517.1
RefSeq:NP_723438.1 UniGene:Dm.20642 ProteinModelPortal:Q94899
SMR:Q94899 DIP:DIP-19507N IntAct:Q94899 MINT:MINT-775221
STRING:Q94899 PaxDb:Q94899 PRIDE:Q94899 EnsemblMetazoa:FBtr0079780
EnsemblMetazoa:FBtr0079781 EnsemblMetazoa:FBtr0331452 GeneID:34225
KEGG:dme:Dmel_CG9556 CTD:34225 FlyBase:FBgn0013746
InParanoid:Q94899 OrthoDB:EOG4QNKBG PhylomeDB:Q94899
GenomeRNAi:34225 NextBio:787477 Bgee:Q94899 GermOnline:CG9556
GO:GO:0008231 Uniprot:Q94899
Length = 444
Score = 134 (52.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 47/201 (23%), Positives = 88/201 (43%)
Query: 211 PVTIAKLRCAAGLAHLEARKYKLAARKFLEV--GPDLGNSYNEVIAAQDVATYGGLC--A 266
P+ + +R G HL +++ A F E D S + + L
Sbjct: 232 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG 291
Query: 267 LASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIH 326
+ FD E K ++N E++ + L+N + ++ L ++N++ D
Sbjct: 292 INPFDSQEAKP-------YKNDPEILA-MTNLVNSYQNNDINEFETILRQHRSNIMADQF 343
Query: 327 LHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARI 386
+ +H+E L IR + LI+ P+ ++ + +ANA A +E L + I D+ I+ RI
Sbjct: 344 IREHIEDLLRNIRTQVLIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDDTIKGRI 403
Query: 387 DSHNKILYARHADQRNATFQR 407
D N++L D+ N++ R
Sbjct: 404 DQVNQVL---QLDKINSSASR 421
>SGD|S000002255 [details] [associations]
symbol:RPN6 "Essential, non-ATPase regulatory subunit of the
26S proteasome lid" species:4932 "Saccharomyces cerevisiae"
[GO:0005198 "structural molecule activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0043248
"proteasome assembly" evidence=IMP] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0034515 "proteasome storage granule" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
SGD:S000002255 GO:GO:0005198 EMBL:BK006938 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0008541
GO:GO:0006511 EMBL:X95644 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 GeneTree:ENSGT00530000063301 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000210093 KO:K03036 OrthoDB:EOG4K3Q51
EMBL:Z74145 PIR:S67639 RefSeq:NP_010186.1 ProteinModelPortal:Q12377
SMR:Q12377 DIP:DIP-1581N IntAct:Q12377 MINT:MINT-396028
STRING:Q12377 PaxDb:Q12377 PeptideAtlas:Q12377 EnsemblFungi:YDL097C
GeneID:851461 KEGG:sce:YDL097C OMA:DAMKCVA NextBio:968741
Genevestigator:Q12377 GermOnline:YDL097C Uniprot:Q12377
Length = 434
Score = 126 (49.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 49/222 (22%), Positives = 91/222 (40%)
Query: 213 TIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGN--SYNEVIAAQDVATYGGLCALASF 270
T+A+L +G+ H E + YK A F E N ++N A V Y L +
Sbjct: 214 TVAELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSYEKACQVLKYMLLSKIMLN 273
Query: 271 DRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKA---NLLLDIHL 327
++K+ + + + + + + Y++R S LD+ LK L+ D
Sbjct: 274 LIDDVKNILNAKYTKETYQSRGIDAMKAVAEAYNNR--SLLDFNTALKQYEKELMGDELT 331
Query: 328 HDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARID 387
H LYD + L + PF V++ ++ +E +L +I D +D
Sbjct: 332 RSHFNALYDTLLESNLCKIIEPFECVEISHISKIIGLDTQQVEGKLSQMILDKIFYGVLD 391
Query: 388 SHNKILYARHADQRNATFQRVLQTGSEFDQDVRAMLLRANLL 429
N LY ++AT+ L+ + ++ V + +A++L
Sbjct: 392 QGNGWLYVYETPNQDATYDSALELVGQLNKVVDQLFEKASVL 433
>UNIPROTKB|E2REA8 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301
CTD:9318 InterPro:IPR019280 Pfam:PF10075 EMBL:AAEX03016114
RefSeq:XP_535470.1 ProteinModelPortal:E2REA8 PRIDE:E2REA8
Ensembl:ENSCAFT00000023590 GeneID:478295 KEGG:cfa:478295
Uniprot:E2REA8
Length = 443
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 44/199 (22%), Positives = 81/199 (40%)
Query: 211 PVTIAKLRCAAGLAHLEARKYKLAARKFLEV--GPDLGNSYNEVIAAQDVATYGGLC--A 266
P+ + +R G HL +++ A F E D S + + L
Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG 290
Query: 267 LASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIH 326
+ FD E K ++N E++ + L++ + ++ L +N++ D
Sbjct: 291 INPFDSQEAKP-------YKNDPEILA-MTNLVSAYQNNDITEFEKILKTNHSNIMDDPF 342
Query: 327 LHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARI 386
+ +H+E L IR + LI+ P+ + + ++ VA +E L I DN I RI
Sbjct: 343 IREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRI 402
Query: 387 DSHNKILYARHADQRNATF 405
D N++L H + A +
Sbjct: 403 DQVNQLLELDHQKRGGARY 421
>UNIPROTKB|P61201 [details] [associations]
symbol:COPS2 "COP9 signalosome complex subunit 2"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=NAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0008180 "signalosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0010388 "cullin deneddylation" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006366
GO:GO:0004871 Gene3D:1.25.40.10 GO:GO:0008180 CleanEx:HS_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN
EMBL:AF084260 EMBL:AF100762 EMBL:AF212227 EMBL:CR542063
EMBL:BC012629 EMBL:L40388 EMBL:AF120268 IPI:IPI00018813
IPI:IPI00743825 RefSeq:NP_001137359.1 RefSeq:NP_004227.1
UniGene:Hs.369614 ProteinModelPortal:P61201 SMR:P61201
DIP:DIP-42076N IntAct:P61201 MINT:MINT-1204035 STRING:P61201
PhosphoSite:P61201 DMDM:47117681 PaxDb:P61201 PRIDE:P61201
DNASU:9318 Ensembl:ENST00000299259 Ensembl:ENST00000388901
GeneID:9318 KEGG:hsa:9318 UCSC:uc001zxf.3 UCSC:uc001zxh.3
GeneCards:GC15M049417 HGNC:HGNC:30747 HPA:HPA016867 HPA:HPA018271
MIM:604508 neXtProt:NX_P61201 PharmGKB:PA134952445 GenomeRNAi:9318
NextBio:34905 ArrayExpress:P61201 Bgee:P61201 CleanEx:HS_COPS2
Genevestigator:P61201 GermOnline:ENSG00000166200 InterPro:IPR019280
Pfam:PF10075 Uniprot:P61201
Length = 443
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 44/199 (22%), Positives = 81/199 (40%)
Query: 211 PVTIAKLRCAAGLAHLEARKYKLAARKFLEV--GPDLGNSYNEVIAAQDVATYGGLC--A 266
P+ + +R G HL +++ A F E D S + + L
Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG 290
Query: 267 LASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIH 326
+ FD E K ++N E++ + L++ + ++ L +N++ D
Sbjct: 291 INPFDSQEAKP-------YKNDPEILA-MTNLVSAYQNNDITEFEKILKTNHSNIMDDPF 342
Query: 327 LHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARI 386
+ +H+E L IR + LI+ P+ + + ++ VA +E L I DN I RI
Sbjct: 343 IREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRI 402
Query: 387 DSHNKILYARHADQRNATF 405
D N++L H + A +
Sbjct: 403 DQVNQLLELDHQKRGGARY 421
>MGI|MGI:1330276 [details] [associations]
symbol:Cops2 "COP9 (constitutive photomorphogenic) homolog,
subunit 2 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0010388 "cullin deneddylation" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0035914 "skeletal muscle
cell differentiation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
MGI:MGI:1330276 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0030182 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0035914 CleanEx:MM_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 CTD:9318
HOVERGEN:HBG003924 InterPro:IPR019280 Pfam:PF10075 EMBL:AF087688
EMBL:AF114247 EMBL:AF114236 EMBL:AF114237 EMBL:AF114238
EMBL:AF114239 EMBL:AF114240 EMBL:AF114241 EMBL:AF114242
EMBL:AF114244 EMBL:AF114245 EMBL:AF114246 EMBL:AK010383
EMBL:AK084421 EMBL:AK132207 EMBL:BC023096 EMBL:AF071312
IPI:IPI00120513 IPI:IPI00480307 RefSeq:NP_034069.2 UniGene:Mm.3596
ProteinModelPortal:P61202 SMR:P61202 STRING:P61202
PhosphoSite:P61202 PaxDb:P61202 PRIDE:P61202
Ensembl:ENSMUST00000028635 Ensembl:ENSMUST00000110463 GeneID:12848
KEGG:mmu:12848 ChiTaRS:COPS2 NextBio:282396 Bgee:P61202
Genevestigator:P61202 GermOnline:ENSMUSG00000027206 Uniprot:P61202
Length = 443
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 44/199 (22%), Positives = 81/199 (40%)
Query: 211 PVTIAKLRCAAGLAHLEARKYKLAARKFLEV--GPDLGNSYNEVIAAQDVATYGGLC--A 266
P+ + +R G HL +++ A F E D S + + L
Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG 290
Query: 267 LASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIH 326
+ FD E K ++N E++ + L++ + ++ L +N++ D
Sbjct: 291 INPFDSQEAKP-------YKNDPEILA-MTNLVSAYQNNDITEFEKILKTNHSNIMDDPF 342
Query: 327 LHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARI 386
+ +H+E L IR + LI+ P+ + + ++ VA +E L I DN I RI
Sbjct: 343 IREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRI 402
Query: 387 DSHNKILYARHADQRNATF 405
D N++L H + A +
Sbjct: 403 DQVNQLLELDHQKRGGARY 421
>RGD|628791 [details] [associations]
symbol:Cops2 "COP9 signalosome subunit 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0010388
"cullin deneddylation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=IDA] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 44/199 (22%), Positives = 81/199 (40%)
Query: 211 PVTIAKLRCAAGLAHLEARKYKLAARKFLEV--GPDLGNSYNEVIAAQDVATYGGLC--A 266
P+ + +R G HL +++ A F E D S + + L
Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG 290
Query: 267 LASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIH 326
+ FD E K ++N E++ + L++ + ++ L +N++ D
Sbjct: 291 INPFDSQEAKP-------YKNDPEILA-MTNLVSAYQNNDITEFEKILKTNHSNIMDDPF 342
Query: 327 LHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARI 386
+ +H+E L IR + LI+ P+ + + ++ VA +E L I DN I RI
Sbjct: 343 IREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRI 402
Query: 387 DSHNKILYARHADQRNATF 405
D N++L H + A +
Sbjct: 403 DQVNQLLELDHQKRGGARY 421
>UNIPROTKB|P61203 [details] [associations]
symbol:Cops2 "COP9 signalosome complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 44/199 (22%), Positives = 81/199 (40%)
Query: 211 PVTIAKLRCAAGLAHLEARKYKLAARKFLEV--GPDLGNSYNEVIAAQDVATYGGLC--A 266
P+ + +R G HL +++ A F E D S + + L
Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG 290
Query: 267 LASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIH 326
+ FD E K ++N E++ + L++ + ++ L +N++ D
Sbjct: 291 INPFDSQEAKP-------YKNDPEILA-MTNLVSAYQNNDITEFEKILKTNHSNIMDDPF 342
Query: 327 LHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARI 386
+ +H+E L IR + LI+ P+ + + ++ VA +E L I DN I RI
Sbjct: 343 IREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRI 402
Query: 387 DSHNKILYARHADQRNATF 405
D N++L H + A +
Sbjct: 403 DQVNQLLELDHQKRGGARY 421
>ZFIN|ZDB-GENE-040625-15 [details] [associations]
symbol:cops2 "COP9 constitutive photomorphogenic
homolog subunit 2 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0008180
"signalosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040625-15 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
GeneTree:ENSGT00530000063301 EMBL:BC071320 IPI:IPI00488001
RefSeq:NP_001002055.1 UniGene:Dr.78251 ProteinModelPortal:Q6IQT4
STRING:Q6IQT4 PRIDE:Q6IQT4 Ensembl:ENSDART00000006124 GeneID:415145
KEGG:dre:415145 CTD:9318 HOVERGEN:HBG003924 InParanoid:Q6IQT4
OrthoDB:EOG43N7CN NextBio:20818820 ArrayExpress:Q6IQT4 Bgee:Q6IQT4
Uniprot:Q6IQT4
Length = 443
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 44/199 (22%), Positives = 81/199 (40%)
Query: 211 PVTIAKLRCAAGLAHLEARKYKLAARKFLEV--GPDLGNSYNEVIAAQDVATYGGLC--A 266
P+ + +R G HL +++ A F E D S + + L
Sbjct: 231 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG 290
Query: 267 LASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIH 326
+ FD E K ++N E++ + L++ + ++ L +N++ D
Sbjct: 291 INPFDSQEAKP-------YKNDPEILA-MTNLVSAYQNNDITEFEKILKTNHSNIMDDPF 342
Query: 327 LHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARI 386
+ +H+E L IR + LI+ P+ + + ++ VA +E L I DN I RI
Sbjct: 343 IREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTINGRI 402
Query: 387 DSHNKILYARHADQRNATF 405
D N++L H + A +
Sbjct: 403 DQVNQLLELDHQKRGGARY 421
>UNIPROTKB|G3X736 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
EMBL:DAAA02029106 UniGene:Bt.37059 ProteinModelPortal:G3X736
SMR:G3X736 PRIDE:G3X736 Ensembl:ENSBTAT00000017862 NextBio:20925241
Uniprot:G3X736
Length = 450
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 44/199 (22%), Positives = 81/199 (40%)
Query: 211 PVTIAKLRCAAGLAHLEARKYKLAARKFLEV--GPDLGNSYNEVIAAQDVATYGGLC--A 266
P+ + +R G HL +++ A F E D S + + L
Sbjct: 238 PLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSG 297
Query: 267 LASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIH 326
+ FD E K ++N E++ + L++ + ++ L +N++ D
Sbjct: 298 INPFDSQEAKP-------YKNDPEILA-MTNLVSAYQNNDITEFEKILKTNHSNIMDDPF 349
Query: 327 LHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARI 386
+ +H+E L IR + LI+ P+ + + ++ VA +E L I DN I RI
Sbjct: 350 IREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRI 409
Query: 387 DSHNKILYARHADQRNATF 405
D N++L H + A +
Sbjct: 410 DQVNQLLELDHQKRGGARY 428
>TAIR|locus:2030017 [details] [associations]
symbol:ATS9 "AT1G29150" species:3702 "Arabidopsis
thaliana" [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0030163
"protein catabolic process" evidence=TAS] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506
GO:GO:0005634 GO:GO:0046686 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030163 GO:GO:0000502 EMBL:AC021043 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000210093 KO:K03036
OMA:SGILDQG EMBL:AF083890 EMBL:AY230834 EMBL:AY230835 EMBL:AY230836
EMBL:AY230837 EMBL:AF370203 EMBL:AY056311 IPI:IPI00521338
PIR:A86414 PIR:T52033 RefSeq:NP_174210.1 UniGene:At.21249
ProteinModelPortal:Q9LP45 SMR:Q9LP45 IntAct:Q9LP45 STRING:Q9LP45
PRIDE:Q9LP45 EnsemblPlants:AT1G29150.1 GeneID:839789
KEGG:ath:AT1G29150 TAIR:At1g29150 InParanoid:Q9LP45
PhylomeDB:Q9LP45 ProtClustDB:CLSN2679678 Genevestigator:Q9LP45
Uniprot:Q9LP45
Length = 419
Score = 117 (46.2 bits), Expect = 0.00065, P = 0.00065
Identities = 44/207 (21%), Positives = 89/207 (42%)
Query: 221 AGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVI 280
+G+ H E + YK F E N+ + A + Y LC + +A+ + +I
Sbjct: 211 SGILHAEEKDYKTGYSYFFEAFESF-NALGDPRAVFSLK-YMLLCKIM-VSQADDVAGII 267
Query: 281 DNVNFRNFLELVPEVRELINDFYSSRYASCLDY-LGNLKANLLLDIHLHDHVETLYDQIR 339
+ ++ + + + D +S R + L + KA L D +H H+ +LYD +
Sbjct: 268 SSKAGLQYVGPDLDAMKAVADAHSKRSLKLFENALRDYKAQLEDDPIVHRHLSSLYDTLL 327
Query: 340 NKALIQYTHPFVSVDLHMMANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHAD 399
+ L + PF V++ +A + +EK+L +I D + +D L
Sbjct: 328 EQNLCRLIEPFSRVEIAHIAELIGLPLDHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDP 387
Query: 400 QRNATFQRVLQTGSEFDQDVRAMLLRA 426
+ +A + L+T + + V ++ +R+
Sbjct: 388 KADAIYSATLETIANMGKVVDSLYVRS 414
>POMBASE|SPAC23G3.11 [details] [associations]
symbol:rpn6 "19S proteasome regulatory subunit Rpn6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISO] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 PomBase:SPAC23G3.11 GO:GO:0005829 GO:GO:0005634
GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0006511 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
GO:GO:0008540 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG PIR:T50185
RefSeq:NP_593111.1 ProteinModelPortal:Q9P7S2 IntAct:Q9P7S2
STRING:Q9P7S2 PRIDE:Q9P7S2 EnsemblFungi:SPAC23G3.11.1
GeneID:2541807 KEGG:spo:SPAC23G3.11 OrthoDB:EOG4K3Q51
NextBio:20802895 Uniprot:Q9P7S2
Length = 421
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 66/352 (18%), Positives = 128/352 (36%)
Query: 59 HCDIASMQLEALRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAWCDSVDRRAEQR 118
H D+A + ++ R K ++ ++ R ++ K G E D + +++
Sbjct: 61 HNDLAQL-VQQSRPLMANFSKAKSAKIVRTLIDKFSGEKKSLPLQIEVANDCIKWAIKEK 119
Query: 119 KEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHM 178
+ L L T LI S+ Y D + A + R D ++ +H+
Sbjct: 120 RTFLRQALE---TKLI--SL---YYDNSSYTDAINLINTLLSELKRMDDKMLLTE--VHL 169
Query: 179 CMSAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKF 238
S + +I + +K P+ L +G+ H + +K A F
Sbjct: 170 LESKVYHAIRNIPKARASLTAAKTSANAVYCPPMLQGNLDLQSGILHADDMDFKTAYSYF 229
Query: 239 LEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVREL 298
E S ++ A Y L + +E+KS + R + +R +
Sbjct: 230 YEAYEGF-TSLDDDKKALSSLKYMLLSQIMLNSVSEVKSLLTGKHAIRYAGRDIEAMRAI 288
Query: 299 INDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMM 358
+ A L + K L D + H+ +LYD + + L++ PF V++ +
Sbjct: 289 AQAHENRSLADFEKALQDYKPELASDPIIRSHLSSLYDNLLEQNLLRVVEPFSRVEVSHI 348
Query: 359 ANAFKTSVAGIEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQ 410
A S +E +L +I D +D + L Q++ T++ L+
Sbjct: 349 AELIGLSTVQVEGKLSQMILDKIFYGILDQGSGCLIVYDEPQQDKTYEAALE 400
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 441 441 0.00089 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 607 (65 KB)
Total size of DFA: 252 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.41u 0.17s 36.58t Elapsed: 00:00:02
Total cpu time: 36.42u 0.17s 36.59t Elapsed: 00:00:02
Start: Sat May 11 03:34:04 2013 End: Sat May 11 03:34:06 2013