BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013560
(441 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9R0X4|ACOT9_MOUSE Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus
GN=Acot9 PE=1 SV=1
Length = 439
Score = 178 bits (451), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 174/329 (52%), Gaps = 22/329 (6%)
Query: 86 SRTSILYNFSTDDILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLV 145
S +L TD LR++Y N VR G++LEDLD+L + H + + PL +V
Sbjct: 85 SYIEVLLPLGTDPELRDKYVTVQNTVRFGRILEDLDSLGVLVCYMHNHNHSTKMSPLSIV 144
Query: 146 TASVDKIAL-KKSISVDIDLKIVGAVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLTANF 204
T VDKI + K S+S + D+K G V WVG +S+E+++++ Q +D VL A F
Sbjct: 145 TVLVDKIDMCKHSLSPEQDIKFTGHVSWVGNTSMEVKMKMFQLH---NDEKYWPVLDATF 201
Query: 205 IFVARDSKTGKAAPVNRLSPQTEREKSLFEEAE---------ARSKLRKRKTGGDRRELD 255
+ VARDS+ A VN L P+ + E+ LF++ E + S L K + R +
Sbjct: 202 VMVARDSENKGPAFVNPLIPENKEEEELFKQGELNKSRRIAFSTSSLLKVAPSSEERNI- 260
Query: 256 NGEVNRLEALLAEGRVICDMPALADRNSILLRDTRLENALICQPQQRNIHGRIFGGFLML 315
++ L + + I + ++ + DT+L++ IC PQ+RN+ RIFGGFLM
Sbjct: 261 ---IHELFLTTLDPKTISFQSRILPPKAVWMEDTKLKSLDICHPQERNVFNRIFGGFLMR 317
Query: 316 RAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDVGDFLRFKSCVLYTELENPDQPLINIE 375
+A+ELA++TA +F G P + VD + F +PV+VG L S V +T+ I +
Sbjct: 318 KAYELAWATACSFGGSRPYVVTVDDIMFQKPVEVGSLLFLSSQVCFTQ-----DNYIQVR 372
Query: 376 VVAHVTRPEFRSSEVSNTFYFTFTVSKAV 404
V + V+ + R +N F+FTF K V
Sbjct: 373 VHSEVSSLDSREHMTTNVFHFTFMSEKEV 401
>sp|Q9Y305|ACOT9_HUMAN Acyl-coenzyme A thioesterase 9, mitochondrial OS=Homo sapiens
GN=ACOT9 PE=1 SV=2
Length = 439
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 25/344 (7%)
Query: 72 APPQSELLTKTSSQSRTSILYNFSTDDILREQYRDPWNEVRIGKLLEDLDALAGTISVKH 131
A Q L + S +L ++ LRE+Y N VR G++LEDLD+L I H
Sbjct: 72 AKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTVRFGRILEDLDSLGVLICYMH 131
Query: 132 CSDDDSMTRPLLLVTASVDKIAL-KKSISVDIDLKIVGAVIWVGRSSIEIQLEVIQSTKE 190
+ PL +VTA VDKI + KKS+S + D+K G V WVG++S+E+++++ Q
Sbjct: 132 NKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSMEVKMQMFQ---- 187
Query: 191 VSDTSDSVVLTANFIFVARDSKTGKAAPVNRLSPQTEREKSLFEEAE----------ARS 240
+ VL A F+ VARDS+ A VN L P++ E+ LF + E + S
Sbjct: 188 LHGDEFCPVLDATFVMVARDSENKGPAFVNPLIPESPEEEELFRQGELNKGRRIAFSSTS 247
Query: 241 KLRKRKTGGDRRELDNGEVNRLEALLAEGRVICDMPALADRNSILLRDTRLENALICQPQ 300
L+ + +R + ++ L+ + I + N++ + +++L++ IC PQ
Sbjct: 248 LLKMAPSAEERTTIHEMFLSTLDP-----KTISFRSRVLPSNAVWMENSKLKSLEICHPQ 302
Query: 301 QRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDVGDFLRFKSCVL 360
+RNI RIFGGFLM +A+ELA++TA +F G P + VD + F +PV+VG L S V
Sbjct: 303 ERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEVGSLLFLSSQVC 362
Query: 361 YTELENPDQPLINIEVVAHVTRPEFRSSEVSNTFYFTFTVSKAV 404
+T+ I + V + V + + +N F+FTF K V
Sbjct: 363 FTQ-----NNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEV 401
>sp|Q3SWX2|ACOT9_BOVIN Acyl-coenzyme A thioesterase 9, mitochondrial OS=Bos taurus
GN=ACOT9 PE=2 SV=1
Length = 437
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 179/346 (51%), Gaps = 29/346 (8%)
Query: 72 APPQSELLTKTSSQSRTSILYNFSTDDILREQYRDPWNEVRIGKLLEDLDALAGTISVKH 131
A Q L +T S + + LRE+Y N VR G++LEDLD+L I H
Sbjct: 70 AKSQKGLPPRTMKDSYIEVFLPLGSQPELREKYLTVQNTVRFGRILEDLDSLGVLICYMH 129
Query: 132 CSDDDSMTRPLLLVTASVDKIAL-KKSISVDIDLKIVGAVIWVGRSSIEIQLEVIQSTKE 190
+ PL +VTA VDKI + KK++S + D+K G V WVG++S+E+++ + Q
Sbjct: 130 NKIHSAKMSPLSIVTALVDKIDMCKKNLSPEQDIKFSGHVSWVGKTSMEVKMHMFQ---- 185
Query: 191 VSDTSDSVVLTANFIFVARDSKTGKAAPVNRLSPQTEREKSLFEEAE----------ARS 240
+ S VL A F+ VARDS+ A VN L ++ E+ LF++ E + S
Sbjct: 186 LHGNDFSPVLDATFVMVARDSENKGPAFVNPLILESPEEEELFQQGELNKGRRVAFSSTS 245
Query: 241 KLRKRKTGGDRRELDNGEVNRLE--ALLAEGRVICDMPALADRNSILLRDTRLENALICQ 298
L+ T +R + +N L+ + RV+ PA NS+ + +++L++ IC
Sbjct: 246 LLKMAPTAEERTTIHEMFLNTLDPKTISFRSRVL---PA----NSVWMENSKLKSLDICH 298
Query: 299 PQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDVGDFLRFKSC 358
PQ+RNI RIFGGFLM +A+EL ++TA F G P + VD + F +PV+VG L +
Sbjct: 299 PQERNIFNRIFGGFLMRKAYELGWATACNFGGSRPFIVAVDDIMFQKPVEVGSLLFLSAQ 358
Query: 359 VLYTELENPDQPLINIEVVAHVTRPEFRSSEVSNTFYFTFTVSKAV 404
V +T+ I + V + V + + +N F+FTF K V
Sbjct: 359 VCFTQ-----GNYIQVRVHSEVASLQDKEHMTTNVFHFTFMSEKEV 399
>sp|Q32MW3|ACO10_MOUSE Acyl-coenzyme A thioesterase 10, mitochondrial OS=Mus musculus
GN=Acot10 PE=2 SV=1
Length = 439
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 172/329 (52%), Gaps = 22/329 (6%)
Query: 86 SRTSILYNFSTDDILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLV 145
S +L TD LR++Y N VR G++LEDLD+L + H + + L +V
Sbjct: 85 SYIEVLLPLGTDPELRDKYVTVQNTVRFGRILEDLDSLGVLVCYMHNHNHSTNMSLLSIV 144
Query: 146 TASVDKIAL-KKSISVDIDLKIVGAVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLTANF 204
T VDKI + K S+S + D+K G V WVG +++E+++++ Q D + VL A F
Sbjct: 145 TVLVDKIDMCKHSLSPEQDIKFTGHVSWVGNTTMEVKMKMFQLH---DDETYWPVLDATF 201
Query: 205 IFVARDSKTGKAAPVNRLSPQTEREKSLFEEAE---------ARSKLRKRKTGGDRRELD 255
+ VA+DS+ + A VN L P+ + E+ LF + E + S L K + R +
Sbjct: 202 VMVAQDSENKRPAFVNPLIPENKEEEELFTQGELNKSRRIAFSTSSLLKVAPSSEERNI- 260
Query: 256 NGEVNRLEALLAEGRVICDMPALADRNSILLRDTRLENALICQPQQRNIHGRIFGGFLML 315
++ L + + I + ++ + DT+L++ IC PQ+RN+ RIFGGFLM
Sbjct: 261 ---IHELFLSTLDPKTISFQSRILPPKAVWMEDTKLKSLDICHPQERNVFNRIFGGFLMR 317
Query: 316 RAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDVGDFLRFKSCVLYTELENPDQPLINIE 375
+A+ELA++TA +F G P + VD + F +PV+VG L S V +T+ I +
Sbjct: 318 KAYELAWATACSFGGSRPYVVTVDDIMFQKPVEVGSLLFLSSQVCFTQ-----GNYIQVR 372
Query: 376 VVAHVTRPEFRSSEVSNTFYFTFTVSKAV 404
V + V + R +N F+FTF K V
Sbjct: 373 VHSEVFSLDSREHMTTNVFHFTFMSEKEV 401
>sp|Q8WXI4|ACO11_HUMAN Acyl-coenzyme A thioesterase 11 OS=Homo sapiens GN=ACOT11 PE=1 SV=1
Length = 607
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 120/296 (40%), Gaps = 30/296 (10%)
Query: 109 NEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSISVDIDLKIVG 168
E+ +G+LL+ +D A + +H VTAS+D I + +ISV + I
Sbjct: 62 GELSVGQLLKWIDTTACLSAERHAG--------CPCVTASMDDIYFEHTISVGQVVNIKA 113
Query: 169 AVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLTANFIFVARDSKTGKAAPVNRLSPQTER 228
V SS+E+ ++V +++++ V A FVAR T + +++P+TE
Sbjct: 114 KVNRAFNSSMEVGIQV--ASEDLCSEKQWNVCKALATFVARREIT--KVKLKQITPRTEE 169
Query: 229 EKSLFEEAEARSKLRKRKTGGDRRELDNGEVNRLEALLAEGRVICDMPALADRNSILLRD 288
EK E + A + R R D ++ LLA + D+ + +
Sbjct: 170 EK--MEHSVAAERRRMRLVYADT----------IKDLLANCAIQGDLESRDCSRMVPAEK 217
Query: 289 TRLENALICQPQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVD 348
TR+E+ + P N G FGG +M +A A P ++ F P
Sbjct: 218 TRVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQ 277
Query: 349 VGDFLRFKSCVLYTELENPDQPLINIEVVAHVTRPEFRSSEVS-NTFYFTFTVSKA 403
VGD L K+ V N + + + V R E + N+ + TF V A
Sbjct: 278 VGDRLVLKAIV-----NNAFKHSMEVGVCVEAYRQEAETHRRHINSAFMTFVVLDA 328
>sp|O00154|BACH_HUMAN Cytosolic acyl coenzyme A thioester hydrolase OS=Homo sapiens
GN=ACOT7 PE=1 SV=3
Length = 380
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 82 TSSQSRTSILYNFSTDDILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSMTRP 141
T S S++S+++ D + V G ++ +D +AG ++ +HC +
Sbjct: 222 TVSYSQSSLIHLVGPSDCTLHGF------VHGGVTMKLMDEVAGIVAARHCKTN------ 269
Query: 142 LLLVTASVDKIALKKSISVDIDLKIVGAVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLT 201
+VTASVD I I + I G + + S+EI EV+ V D+S
Sbjct: 270 --IVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEI--EVLVDADPVVDSSQKRYRA 325
Query: 202 ANFIFVARD-SKTGKAAPVNRLSPQTEREKSLFEEAEARSKLRKRKTGG 249
A+ F S+ G++ PV +L P+TE EK FEE + R K K G
Sbjct: 326 ASAFFTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQG 374
>sp|Q91V12|BACH_MOUSE Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus
GN=Acot7 PE=1 SV=2
Length = 381
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 82 TSSQSRTSILYNFSTDDILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSMTRP 141
T S S++S+++ D + V G ++ +D +AG ++ +HC +
Sbjct: 223 TVSYSQSSLIHLVGPSDCTLHGF------VHGGVTMKLMDEVAGIVAARHCKTN------ 270
Query: 142 LLLVTASVDKIALKKSISVDIDLKIVGAVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLT 201
+VTASVD I I + I G + + S+EI EV+ V D S
Sbjct: 271 --IVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEI--EVLVDADPVVDNSQKRYRA 326
Query: 202 AN--FIFVARDSKTGKAAPVNRLSPQTEREKSLFEEAEARSKLRKRKTGG 249
A+ F +V+ + + GK PV +L P+TE EK FEE + R K K G
Sbjct: 327 ASAFFTYVSLNQE-GKPMPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQG 375
>sp|Q64559|BACH_RAT Cytosolic acyl coenzyme A thioester hydrolase OS=Rattus norvegicus
GN=Acot7 PE=1 SV=4
Length = 381
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 82 TSSQSRTSILYNFSTDDILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSMTRP 141
T S S++S+++ D + V G ++ +D +AG ++ +HC +
Sbjct: 223 TVSYSQSSLIHLVGPSDCTLHGF------VHGGVTMKLMDEVAGIVAARHCKTN------ 270
Query: 142 LLLVTASVDKIALKKSISVDIDLKIVGAVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLT 201
+VTASVD I I + I G + + S+EI EV+ V D S
Sbjct: 271 --IVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEI--EVLVDADPVVDNSQKRYRA 326
Query: 202 AN--FIFVARDSKTGKAAPVNRLSPQTEREKSLFEEAEARSKLRKRKTGG 249
A+ F +V+ + + GK PV +L P+TE EK FEE + R K K G
Sbjct: 327 ASAFFTYVSLNQE-GKPLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQG 375
>sp|P0A0Q7|VDLD_HELPY Protein VdlD OS=Helicobacter pylori (strain ATCC 700392 / 26695)
GN=vdlD PE=3 SV=1
Length = 174
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 18/140 (12%)
Query: 109 NEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSISVDIDLKIVG 168
N + G+LL LD +A S ++C+ VT SVD + K I V L +
Sbjct: 39 NVMHGGELLNLLDKVAYVCSTRYCAKGT--------VTLSVDGVTFKYPIPVGNLLTFLA 90
Query: 169 AVIWVGRSSIEIQLEVIQ---STKEVSDTSDSVVLTANFIFVARDSKTGKAAPVNRLSPQ 225
++ +VG +S E+ ++V+ T+E++ T+ + F VA ++ GK P+ + P+
Sbjct: 91 SINYVGNTSCEVGIKVLSEDIKTREITHTN-----SCYFTMVAVEN--GKPTPMPKYEPK 143
Query: 226 TEREKSLFEEAEARSKLRKR 245
TE E +E A R ++R R
Sbjct: 144 TEVEIRRYEGALKRKEMRTR 163
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 279 ADRNSILLRDTRLENALICQPQQRNIHGRIFGGFLMLRAFELAF--STAYAFAGLMPCFL 336
ADR +L+ + + P N + + GG L+ ++A+ ST Y G + L
Sbjct: 19 ADRTKLLM-------SYLVVPTTANFNNVMHGGELLNLLDKVAYVCSTRYCAKGTVT--L 69
Query: 337 EVDHVDFLRPVDVGDFLRFKSCVLYTELENPDQPLINIEVVAHVTRPEFRSSEV--SNTF 394
VD V F P+ VG+ L F + + Y + N + EV V + ++ E+ +N+
Sbjct: 70 SVDGVTFKYPIPVGNLLTFLASINY--VGN-----TSCEVGIKVLSEDIKTREITHTNSC 122
Query: 395 YFTFTVSKAVTNG 407
YFT AV NG
Sbjct: 123 YFTMV---AVENG 132
>sp|P0A0Q8|VDLD_HELPJ Protein VdlD OS=Helicobacter pylori (strain J99) GN=vdlD PE=3 SV=1
Length = 174
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 18/140 (12%)
Query: 109 NEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSISVDIDLKIVG 168
N + G+LL LD +A S ++C+ VT SVD + K I V L +
Sbjct: 39 NVMHGGELLNLLDKVAYVCSTRYCAKGT--------VTLSVDGVTFKYPIPVGNLLTFLA 90
Query: 169 AVIWVGRSSIEIQLEVIQ---STKEVSDTSDSVVLTANFIFVARDSKTGKAAPVNRLSPQ 225
++ +VG +S E+ ++V+ T+E++ T+ + F VA ++ GK P+ + P+
Sbjct: 91 SINYVGNTSCEVGIKVLSEDIKTREITHTN-----SCYFTMVAVEN--GKPTPMPKYEPK 143
Query: 226 TEREKSLFEEAEARSKLRKR 245
TE E +E A R ++R R
Sbjct: 144 TEVEIRRYEGALKRKEMRTR 163
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 279 ADRNSILLRDTRLENALICQPQQRNIHGRIFGGFLMLRAFELAF--STAYAFAGLMPCFL 336
ADR +L+ + + P N + + GG L+ ++A+ ST Y G + L
Sbjct: 19 ADRTKLLM-------SYLVVPTTANFNNVMHGGELLNLLDKVAYVCSTRYCAKGTVT--L 69
Query: 337 EVDHVDFLRPVDVGDFLRFKSCVLYTELENPDQPLINIEVVAHVTRPEFRSSEV--SNTF 394
VD V F P+ VG+ L F + + Y + N + EV V + ++ E+ +N+
Sbjct: 70 SVDGVTFKYPIPVGNLLTFLASINY--VGN-----TSCEVGIKVLSEDIKTREITHTNSC 122
Query: 395 YFTFTVSKAVTNG 407
YFT AV NG
Sbjct: 123 YFTMV---AVENG 132
>sp|Q8WYK0|ACO12_HUMAN Acyl-coenzyme A thioesterase 12 OS=Homo sapiens GN=ACOT12 PE=1 SV=1
Length = 555
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 27/253 (10%)
Query: 109 NEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSISVDIDLKIVG 168
E+ G+LL+ +D A + KH + VTASVD I +++ V + I
Sbjct: 24 GELSAGQLLKWIDTTACLAAEKHAG--------VSCVTASVDDIQFEETARVGQVITIKA 75
Query: 169 AVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLTANFIFVARDSKTGKA--APVNRLSPQT 226
V +S+EI ++V+ +++ + +V A FVA+ K PV L+ Q
Sbjct: 76 KVTRAFSTSMEISIKVM--VQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPVTLLTEQD 133
Query: 227 EREKSLFEEAEARSKLRKRKTGGDRRELDNGEVNRLEALLAEGRVICDMPALADRNSILL 286
E +L +RR++ + L+ E D+ + ++
Sbjct: 134 HVEHNL---------------AAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVST 178
Query: 287 RDTRLENALICQPQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRP 346
R T +++ + P N HG FGG +M +A +A P VD F P
Sbjct: 179 RGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGP 238
Query: 347 VDVGDFLRFKSCV 359
VGD L F + V
Sbjct: 239 STVGDRLVFTAIV 251
>sp|Q8VHQ9|ACO11_MOUSE Acyl-coenzyme A thioesterase 11 OS=Mus musculus GN=Acot11 PE=2 SV=1
Length = 594
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 114/292 (39%), Gaps = 31/292 (10%)
Query: 110 EVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSISVDIDLKIVGA 169
E+ IG+LL+ +D A + +H VTAS+D I +ISV + I
Sbjct: 65 ELSIGQLLKWIDTTACLSAERHAG--------CPCVTASMDDIYFDHTISVGQVVNIKAK 116
Query: 170 VIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLTANFIFVARDSKTGKAAPVNRLSPQTERE 229
V SS+E+ ++V+ ++++ V A FVA + + ++ P TE E
Sbjct: 117 VNRAFNSSMEVGIQVV--SEDLCSEKQWSVCKALATFVAH--RELSKVKLKQVIPLTEEE 172
Query: 230 KSLFEEAEARSKLRKRKTGGDRRELDNGEVNRLEALLAEGRVICDMPALADRNSILLRDT 289
K+ + +RR + + ++ LL + D+ N + T
Sbjct: 173 KT------------EHGVAAERRRMRLVYADTIKDLLTHCVIQDDLDKDCS-NMVPAEKT 219
Query: 290 RLENALICQPQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDV 349
R+E+ + P N G FGG +M +A A P ++ F P V
Sbjct: 220 RVESVELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCHAHPTLKAIEMFHFRGPSQV 279
Query: 350 GDFLRFKSCVLYTELENPDQPLINIEVVAHVTRPEFRSSEVS-NTFYFTFTV 400
GD L K+ V N + + + V R E + N+ + TF V
Sbjct: 280 GDRLVLKAIV-----NNAFKHSMEVGVCVEAYRQEAETQRRHINSAFMTFVV 326
>sp|Q9DBK0|ACO12_MOUSE Acyl-coenzyme A thioesterase 12 OS=Mus musculus GN=Acot12 PE=2 SV=1
Length = 556
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 100/263 (38%), Gaps = 29/263 (11%)
Query: 100 LREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSIS 159
++ + D E+ G+LL+ +D A + KH + VTAS+D I + +
Sbjct: 16 IQPAHADSRGELSAGQLLKWMDTTACLAAEKHAG--------ISCVTASMDDILFEDTAR 67
Query: 160 VDIDLKIVGAVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLTANFIFVARDSKTGKAAPV 219
+ + I V +S+EI ++VI K ++ A FVA+ K
Sbjct: 68 IGQIITIRAKVTRAFSTSMEISIKVIVQDKFTG--IQKLLCVAFSTFVAKPVGKEKV--- 122
Query: 220 NRLSP---QTEREKSLFEEAEARSKLRKRKTGGDRRELDNGEVNRLEALLAEGRVICDMP 276
L P QTE+E+ A R K+R + N ++ E D
Sbjct: 123 -HLKPVLLQTEQEQVEHNLASERRKVRLQHE------------NTFNNIMKESSRFSDSI 169
Query: 277 ALADRNSILLRDTRLENALICQPQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFL 336
+ + T +++ + P N HG FGG +M +A +A P
Sbjct: 170 CNEEEGTATTMGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCHGHPFLK 229
Query: 337 EVDHVDFLRPVDVGDFLRFKSCV 359
VD F P VGD L F + V
Sbjct: 230 SVDMFKFRGPSTVGDRLVFSAIV 252
>sp|P49851|YKHA_BACSU Uncharacterized acyl-CoA thioester hydrolase YkhA OS=Bacillus
subtilis (strain 168) GN=ykhA PE=3 SV=2
Length = 172
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 114 GKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSISVDIDLKIVGAVIWV 173
GKL+ +D +A + +HC + VTAS+D + K I + + V WV
Sbjct: 34 GKLMSYIDDIASISAARHCRRE--------TVTASMDSVDFLKPIGQKDSVCLESYVTWV 85
Query: 174 GRSSIEIQLEVIQSTKEVSDTSDSVVLTANFI-FVARDSKTGKAAPVNRLSPQTEREKSL 232
G SS+E+ ++VI KE T + + +F+ FVA DS GK PV R+ P+TE E L
Sbjct: 86 GTSSMEVFVKVI---KEHLMTGERELAATSFLTFVALDSN-GKPVPVPRVVPETEEEIML 141
Query: 233 FEEAEARSKLRKRK 246
A R+ RK +
Sbjct: 142 HNTAVQRANERKNR 155
>sp|Q99NB7|ACO12_RAT Acyl-coenzyme A thioesterase 12 OS=Rattus norvegicus GN=Acot12 PE=1
SV=1
Length = 556
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 97/260 (37%), Gaps = 23/260 (8%)
Query: 100 LREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSIS 159
++ + D E+ G+LL+ +D A + KH + VTAS+D I + +
Sbjct: 16 IQPAHADSRGELSAGQLLKWMDTTACLAAEKHAG--------ISCVTASMDDILFEDTAR 67
Query: 160 VDIDLKIVGAVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLTANFIFVARDSKTGKAAPV 219
+ + I V +S+EI ++V K V + F+ + PV
Sbjct: 68 IGQIVTIRAKVTRAFSTSMEISIKVRVQDKFTGIQKLLCVAFSTFVVKPLGKEKVHLKPV 127
Query: 220 NRLSPQTEREKSLFEEAEARSKLRKRKTGGDRRELDNGEVNRLEALLAEGRVICDMPALA 279
QTE+E+ A R K+R + N ++ E + D
Sbjct: 128 LL---QTEQEQVEHRLASERRKVRLQHE------------NTFSNIMKESNWLRDPVCNE 172
Query: 280 DRNSILLRDTRLENALICQPQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVD 339
+ + T +++ + P N HG FGG +M +A +A P VD
Sbjct: 173 EEGTATTMATSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCHGHPFLKSVD 232
Query: 340 HVDFLRPVDVGDFLRFKSCV 359
F P VGD L F + V
Sbjct: 233 MFKFRGPSTVGDRLVFNAIV 252
>sp|Q9Z7Q0|Y654_CHLPN Uncharacterized acyl-CoA thioester hydrolase
CPn_0654/CP_0093/CPj0654/CpB0680 OS=Chlamydia pneumoniae
GN=CPn_0654 PE=3 SV=1
Length = 155
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 109 NEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSISVDIDLKIVG 168
N V G L+ LD LA ++ +H + VTA VD + + +L
Sbjct: 28 NTVFGGLLMSLLDRLALVVAERHTES--------VCVTAFVDALRFYAPAYMGENLICKA 79
Query: 169 AVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLTANFIFVARDSKTGKAAPVNRLSPQTER 228
AV R+S+E+ ++V + + + +A F FVA + + + PV+++ P+T
Sbjct: 80 AVNRTWRTSLEVGVKVW--AENIYKQERRHITSAYFTFVAVN-EDNQPIPVHQIVPETPE 136
Query: 229 EKSLFEEAEARSKLR 243
EK + EA+ R + R
Sbjct: 137 EKRRYNEADRRRQAR 151
>sp|Q0P3M6|RPOB_OSTTA DNA-directed RNA polymerase subunit beta OS=Ostreococcus tauri
GN=rpoB PE=3 SV=1
Length = 1088
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 94 FSTDDILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIA 153
+ T+ + R QY D + V+IG +E D L G IS + SD+D +R L + V +
Sbjct: 734 YFTNQVDRNQYLDEFGVVKIGTWVEAGDVLVGKISPQPDSDNDPESRLLRAIFGGVARNT 793
Query: 154 LKKS--ISVDIDLKIVGAVIWVGRSSIEIQLEVIQSTKEV 191
S +S + +I+ R + I+ E I+ST V
Sbjct: 794 KTTSYCLSSGVSGRILDVRCEFKRQTKNIEDESIESTGSV 833
>sp|Q9PJK7|Y822_CHLMU Uncharacterized acyl-CoA thioester hydrolase TC_0822 OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=TC_0822 PE=3 SV=1
Length = 159
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 109 NEVRIGKLLEDLDALAGTISVKHCSDDDSMTRPLLLVTASVDKIALKKSISVDIDLKIVG 168
N + G L+ LD LA ++ +HC + VTA VD + + +L
Sbjct: 33 NTIFGGLLMSLLDRLALVVAERHCES--------ICVTALVDAVRFYAPAYMGENLICCA 84
Query: 169 AVIWVGRSSIEIQLEVIQSTKEVSDTSDSVVLTANFIFVARDSKTGKAAPVNRLSPQTER 228
+V R+S+E+ ++V + + + +A F FVA D + + L P+T+
Sbjct: 85 SVNRSWRTSLEVGVKVW--AENIYKQEQRHITSAYFTFVAVD-ENNSPVEIPELVPETQE 141
Query: 229 EKSLFEEAEARSKLR 243
E F EA+ R R
Sbjct: 142 EIRRFHEADQRRASR 156
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 57/141 (40%), Gaps = 13/141 (9%)
Query: 299 PQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDVGDFLRFKSC 358
P N + IFGG LM LA A + VD V F P +G+ L +
Sbjct: 26 PNDLNTNNTIFGGLLMSLLDRLALVVAERHCESICVTALVDAVRFYAPAYMGENLICCAS 85
Query: 359 V---LYTELENPDQPLINIEVVA-HVTRPEFRSSEVSNTFYFTFTVSKAVTNGFRIRNVV 414
V T LE + ++V A ++ + E R + YFTF + I +V
Sbjct: 86 VNRSWRTSLE------VGVKVWAENIYKQEQRHI---TSAYFTFVAVDENNSPVEIPELV 136
Query: 415 PGTQEEARHILERMDAKALQL 435
P TQEE R E +A +L
Sbjct: 137 PETQEEIRRFHEADQRRASRL 157
>sp|O66120|Y511_ZYMMO Uncharacterized acyl-CoA thioester hydrolase ZMO0511 OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=ZMO0511 PE=3 SV=1
Length = 149
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 295 LICQPQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDVGDFLR 354
+I P N GR+FGG+LM + A A A + D + F PV VGD L
Sbjct: 24 VIAMPANTNADGRMFGGWLMGMLDQAAGLVAARHALARVVTVAADSITFHAPVQVGDELS 83
Query: 355 FKSCVLYTELENPDQPLINIEV 376
LY L + + IEV
Sbjct: 84 -----LYARLVKVGRTSMKIEV 100
>sp|P57362|Y274_BUCAI Uncharacterized acyl-CoA thioester hydrolase BU274 OS=Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain APS)
GN=BU274 PE=3 SV=1
Length = 135
Score = 34.3 bits (77), Expect = 2.1, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 296 ICQPQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDVGDFLR- 354
+ P+ N +G IFGG++M + A +G + VD ++FL+ V VGD +
Sbjct: 17 LSMPENINANGDIFGGWIMSQMDLGGAILAKEISGGKVATVRVDSINFLKSVSVGDIVNC 76
Query: 355 FKSCV 359
+ +C+
Sbjct: 77 YANCI 81
>sp|Q67T91|FABZ_SYMTH 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=fabZ PE=3 SV=1
Length = 142
Score = 34.3 bits (77), Expect = 2.1, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 308 IFGGFLMLRAFELAFSTAY----AFAGLMPCFLEVDHVDFLRPVDVGDFLRFK 356
IF G L+L A A + A FAG +P F +D F RPV GD LR +
Sbjct: 47 IFPGVLILEAMAQAGAVAVLSQPEFAGKVPLFAGIDDARFRRPVLPGDQLRLE 99
>sp|O84540|Y535_CHLTR Uncharacterized acyl-CoA thioester hydrolase CT_535 OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=CT_535 PE=3 SV=1
Length = 160
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 13/141 (9%)
Query: 299 PQQRNIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDVGDFLRFKSC 358
P N + IFGG LM LA A + VD + F P +G+ L +
Sbjct: 27 PNDLNTNNTIFGGLLMSLLDRLALVVAERHCESICVTAFVDAMRFYAPAYMGENLICCAS 86
Query: 359 V---LYTELENPDQPLINIEVVA-HVTRPEFRSSEVSNTFYFTFTVSKAVTNGFRIRNVV 414
V T LE + ++V A ++ + E R + YFTF + + ++
Sbjct: 87 VNRSWRTSLE------VGVKVWAENIYKQEHRHI---TSAYFTFVAVDKNNSPVEVPELI 137
Query: 415 PGTQEEARHILERMDAKALQL 435
P +QEE R E +AL+L
Sbjct: 138 PESQEEIRRFREADQRRALRL 158
>sp|P44886|Y827_HAEIN Uncharacterized acyl-CoA thioester hydrolase HI_0827 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_0827 PE=1 SV=1
Length = 154
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 144 LVTASVDKIALKKSISVDIDLKIVGAVIWVGRSSIEIQLEV-IQSTKEVSDTSDSVVLTA 202
+VT +V+ + K ISV + G + VGRSSI+I++EV ++ V A
Sbjct: 59 VVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDA 118
Query: 203 NFIFVARDSKTGKAAPVNRLSPQTEREKSL 232
F FVA D+ G++ + R + Q E EK+L
Sbjct: 119 VFTFVAVDN-NGRSRTIPRENNQ-ELEKAL 146
>sp|P42398|Y263_BUCAP Uncharacterized acyl-CoA thioester hydrolase BUsg_263 OS=Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)
GN=BUsg_263 PE=3 SV=3
Length = 135
Score = 33.1 bits (74), Expect = 4.5, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 303 NIHGRIFGGFLMLRAFELAFSTAYAFAGLMPCFLEVDHVDFLRPVDVGDFLRFKSCVLYT 362
N +G IFGG++M + A AG ++V+ + F +PV VGD + SC +
Sbjct: 24 NANGDIFGGWIMSQMDMGGAILAKEIAGGRVVTVQVNGITFFKPVSVGDIV---SCYAHC 80
Query: 363 ELENPDQPLINIEV 376
IN+EV
Sbjct: 81 IKTGNSSITINLEV 94
>sp|O92604|RDRP_RRSVT RNA-directed RNA polymerase OS=Rice ragged stunt virus (isolate
Thailand) PE=3 SV=1
Length = 1255
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 356 KSCVLYTELENPDQPLINIEVVAH-VTR-PEFRSSEVSNTFYFTFTVSKAVTNG-FRIRN 412
+SC+ L P ++N ++V VTR P F S + T + TFT+S A+ G R+ N
Sbjct: 628 RSCLRAMHLLQPQNCVLNDDIVGELVTREPTFPSGQPFTTVHHTFTLSNAIMGGTLRVTN 687
Query: 413 V 413
+
Sbjct: 688 L 688
>sp|Q6ZUV0|BACHL_HUMAN Cytosolic acyl coenzyme A thioester hydrolase-like OS=Homo sapiens
GN=ACOT7L PE=1 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 82 TSSQSRTSILYNFSTDDILREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDDDSMTRP 141
T S S++S+++ D + V G ++ +D +AG ++ +HC +
Sbjct: 144 TVSYSQSSLIHLVGPSDCTLHSF------VHEGVTMKVMDEVAGILAARHCKTN------ 191
Query: 142 LLLVTASVDKIALKKSISVDIDLKIVGAVIWVGRSSIEIQLEV 184
LVTAS++ I I I G + + S+EI++ V
Sbjct: 192 --LVTASMEAINFDNKIRKGCIKTISGRMTFTSNKSVEIEVLV 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,963,949
Number of Sequences: 539616
Number of extensions: 6263782
Number of successful extensions: 16011
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 15949
Number of HSP's gapped (non-prelim): 48
length of query: 441
length of database: 191,569,459
effective HSP length: 121
effective length of query: 320
effective length of database: 126,275,923
effective search space: 40408295360
effective search space used: 40408295360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)