RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 013562
(441 letters)
>gnl|CDD|215351 PLN02649, PLN02649, glucose-6-phosphate isomerase.
Length = 560
Score = 830 bits (2145), Expect = 0.0
Identities = 318/421 (75%), Positives = 359/421 (85%), Gaps = 1/421 (0%)
Query: 12 VGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSI 71
GATGK +VV++GIGGSFLGPLFVH AL TD EA++ A+GR+LRFLANVDP+D+A+ I
Sbjct: 140 KGATGKRFTNVVSIGIGGSFLGPLFVHEALATDPEALKSAKGRKLRFLANVDPVDIARQI 199
Query: 72 TGLNPETTLVVVVSKTFTTAETMLNARTLREWISTALGPSAVAKHMVAVSTNLTLVEKFG 131
L+PETTLVVVVSKTFTTAETMLNART+R+W+ ALG AVAKHMVAVSTNL LV KFG
Sbjct: 200 AQLDPETTLVVVVSKTFTTAETMLNARTVRKWLRDALGGLAVAKHMVAVSTNLLLVNKFG 259
Query: 132 IDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGAWSIDQHFISAPYEKNI 191
IDP NAF FWDWVGGRYSVCSAVG+LPLSLQYGF VVE+FL+GA S+D+HF +AP ++NI
Sbjct: 260 IDPWNAFPFWDWVGGRYSVCSAVGLLPLSLQYGFDVVEEFLEGAASMDEHFRTAPLKENI 319
Query: 192 PVLLGLLSIWNVSFLGHPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEAG 251
PVLLGLLS+WN SFLG+PARAILPYSQAL KFAPHIQQ+ MESNGKGV +DG PLP G
Sbjct: 320 PVLLGLLSVWNSSFLGYPARAILPYSQALLKFAPHIQQLDMESNGKGVDLDGNPLPVNTG 379
Query: 252 EIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVYLK-GEVVSNHDELMSNFFAQ 310
EIDFGEPGTNGQHSFYQLIHQGR IPCDFIGVV+SQQPV+L GE VSNHDELMSNFFAQ
Sbjct: 380 EIDFGEPGTNGQHSFYQLIHQGRNIPCDFIGVVRSQQPVHLWLGEGVSNHDELMSNFFAQ 439
Query: 311 PDALAVGKTPEQLQKENVAPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHRIAV 370
PDALA GKTPEQL+ E V LIPHK F+GNRPSLS+LLP L AY +GQLLA+YEHR+AV
Sbjct: 440 PDALAYGKTPEQLRAEGVPEELIPHKVFAGNRPSLSILLPELTAYTVGQLLALYEHRVAV 499
Query: 371 EGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRYLEASSDI 430
+GFIW INSFDQWGVELGK+LA +VR L+ +R K EP+EGFN STT LL YL +
Sbjct: 500 QGFIWNINSFDQWGVELGKALAKRVRAVLNEARTKGEPVEGFNSSTTALLNHYLANKRAL 559
Query: 431 P 431
Sbjct: 560 I 560
>gnl|CDD|185612 PTZ00430, PTZ00430, glucose-6-phosphate isomerase; Provisional.
Length = 552
Score = 705 bits (1821), Expect = 0.0
Identities = 261/418 (62%), Positives = 318/418 (76%), Gaps = 4/418 (0%)
Query: 12 VGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSI 71
+G+TGK LK+V+ +GIGGS+LG FV+ AL+T EA E ++GR+LRFLANVDPIDV ++
Sbjct: 135 LGSTGKKLKNVICIGIGGSYLGTEFVYEALRTYGEAREASKGRKLRFLANVDPIDVRRAT 194
Query: 72 TGLNPETTLVVVVSKTFTTAETMLNARTLREWISTALG-PSAVAKHMVAVSTNLTLVEKF 130
GL+PE TLVV++SKTFTTAETMLNA+T+R+W+ + A++KH+ AVSTNL L +F
Sbjct: 195 EGLDPEETLVVIISKTFTTAETMLNAKTVRQWLLDNIKSKEALSKHLCAVSTNLKLTSEF 254
Query: 131 GIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGAWSIDQHFISAPYEKN 190
GI N F FWDWVGGR+SV SAVG+LPLS+Q+G+ +V++FL G +D+HF +AP E+N
Sbjct: 255 GIPDENVFGFWDWVGGRFSVTSAVGILPLSIQFGYDIVQQFLNGCHDMDEHFRTAPLEEN 314
Query: 191 IPVLLGLLSIWNVSFLGHPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEA 250
+PVLLGL S +N +FLG+ AILPY QAL KF H+QQ+ MESNGK V++DG L +
Sbjct: 315 LPVLLGLTSFYNSTFLGYNCVAILPYCQALLKFPAHVQQLLMESNGKSVTLDGNTLDYNT 374
Query: 251 GEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQ 310
GEI FGEPGTNGQHSFYQL+HQGRV+P +FIG KSQ P+ L GE VSNHDELMSNFFAQ
Sbjct: 375 GEIYFGEPGTNGQHSFYQLLHQGRVVPSEFIGFAKSQNPIKLLGEPVSNHDELMSNFFAQ 434
Query: 311 PDALAVGKTPEQLQKENVAPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHRIAV 370
PDALA GKT E+L+KE V LIPHK F GNRPSL LL P LN Y IGQLLA+YEHR V
Sbjct: 435 PDALAFGKTYEELEKEGVPEELIPHKVFPGNRPSLLLLFPELNPYTIGQLLALYEHRTVV 494
Query: 371 EGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEG---FNFSTTTLLTRYLE 425
EGF+W INSFDQWGVELGK LA VR +R P FN ST LL+ YL+
Sbjct: 495 EGFLWNINSFDQWGVELGKVLAKDVRNLFKDNRSNSSPHAKESKFNGSTKRLLSYYLQ 552
>gnl|CDD|215867 pfam00342, PGI, Phosphoglucose isomerase. Phosphoglucose isomerase
catalyzes the interconversion of glucose-6-phosphate and
fructose-6-phosphate.
Length = 483
Score = 622 bits (1605), Expect = 0.0
Identities = 240/411 (58%), Positives = 287/411 (69%), Gaps = 18/411 (4%)
Query: 12 VGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSI 71
G TGK + DVV +GIGGS LGP V AL+ E + F++NVD +A+ +
Sbjct: 89 KGYTGKAITDVVNIGIGGSDLGPRMVIEALKHYSE-----NALIVFFVSNVDGTHIAEVL 143
Query: 72 TGLNPETTLVVVVSKTFTTAETMLNARTLREWISTALG-PSAVAKHMVAVSTNLTLVEKF 130
LNPETTL+ V SKTFTTAETM NAR+ REW+ LG SAVAKH VA+STN VEKF
Sbjct: 144 KKLNPETTLINVASKTFTTAETMTNARSAREWLLKKLGEKSAVAKHFVALSTNAKKVEKF 203
Query: 131 GIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGAWSIDQHFISAPYEKN 190
GIDP N FAFWDWVGGRYSV SA+G LP++L GF E+ L+GA S+D+HF S P EKN
Sbjct: 204 GIDPENMFAFWDWVGGRYSVWSAIG-LPIALSIGFENFEELLEGAASMDKHFSSTPLEKN 262
Query: 191 IPVLLGLLSIWNVSFLGHPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEA 250
P LL L+ +W +F G AILPY Q L +FA ++QQ+ MESNGKGV DGV +
Sbjct: 263 APYLLALVGVWYYNFFGAQTHAILPYDQYLHRFAAYLQQLFMESNGKGVDQDGVLVDHFT 322
Query: 251 GEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFA 309
G IDFGEPGTNGQHSFYQLIHQG R+IPCDFI VKSQ E + +H ELMSNFFA
Sbjct: 323 GSIDFGEPGTNGQHSFYQLIHQGTRLIPCDFILAVKSQN------ENLVHHKELMSNFFA 376
Query: 310 QPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHRIA 369
Q +ALA GKTPE++ KE A L+PHKTF+GNRPSLS+LLP L Y +G L+A YEH+
Sbjct: 377 QTEALAYGKTPEEVNKEAFAGTLLPHKTFTGNRPSLSILLPELTPYTLGALIAFYEHKCF 436
Query: 370 VEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLL 420
V+G +WGINSFDQWGVELGK LA + +LH SR + GF+ ST L+
Sbjct: 437 VQGALWGINSFDQWGVELGKVLAKAILPKLHGSRK----VGGFDSSTNGLI 483
>gnl|CDD|234679 PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.
Length = 548
Score = 572 bits (1477), Expect = 0.0
Identities = 201/424 (47%), Positives = 273/424 (64%), Gaps = 26/424 (6%)
Query: 13 GATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSIT 72
G TGK + DVV +GIGGS LGP+ V AL+ G ++ F++NVD +A+++
Sbjct: 139 GYTGKAITDVVNIGIGGSDLGPVMVTEALRPY-----ADPGLRVHFVSNVDGAHLAETLK 193
Query: 73 GLNPETTLVVVVSKTFTTAETMLNARTLREWISTALGP-SAVAKHMVAVSTNLTLVEKFG 131
L+PETTL +V SKTFTT ET+ NA + R+W A G +AVAKH VAVSTN V +FG
Sbjct: 194 KLDPETTLFIVASKTFTTQETLTNAHSARDWFLAAGGDEAAVAKHFVAVSTNAEAVAEFG 253
Query: 132 IDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGAWSIDQHFISAPYEKNI 191
IDP+N F FWDWVGGRYS+ SA+G L ++L G E+ L GA ++D+HF +AP EKN+
Sbjct: 254 IDPDNMFGFWDWVGGRYSLWSAIG-LSIALAIGPDNFEELLAGAHAMDEHFRTAPLEKNL 312
Query: 192 PVLLGLLSIWNVSFLGHPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEAG 251
PVLL L+ +W +F G + A+LPY Q L +F ++QQ+ MESNGK V DG P+ ++ G
Sbjct: 313 PVLLALIGVWYRNFFGAQSHAVLPYDQYLHRFPAYLQQLEMESNGKSVDRDGTPVDYQTG 372
Query: 252 EIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQ 310
I +GEPGTNGQH+F+QL+HQG +++P DFI + P + +HD L++N FAQ
Sbjct: 373 PIIWGEPGTNGQHAFFQLLHQGTKLVPADFIAPAQPHNP------LGDHHDLLLANCFAQ 426
Query: 311 PDALAVGKTPEQLQKE--------NVAPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLA 362
+AL GKT E+++ E A L PHK F GNRPS ++LL L + +G L+A
Sbjct: 427 TEALMFGKTAEEVRAELRAKGLDEAEAEELAPHKVFPGNRPSTTILLDRLTPFTLGALIA 486
Query: 363 IYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTR 422
+YEH++ V+G IWGINSFDQWGVELGK LA ++ +L + ST L+ R
Sbjct: 487 LYEHKVFVQGVIWGINSFDQWGVELGKQLAKRILPELEGD----SEASAHDSSTNGLINR 542
Query: 423 YLEA 426
Y
Sbjct: 543 YRAW 546
>gnl|CDD|223244 COG0166, Pgi, Glucose-6-phosphate isomerase [Carbohydrate transport
and metabolism].
Length = 446
Score = 392 bits (1008), Expect = e-133
Identities = 168/383 (43%), Positives = 224/383 (58%), Gaps = 31/383 (8%)
Query: 20 KDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSITGLNPETT 79
D+V +GIGGS LGP V AL G ++ F++NVDP +A+ + L+PETT
Sbjct: 80 TDIVNIGIGGSDLGPRAVTEAL-----RPYAPNGPRVHFVSNVDPTYLAEVLKKLDPETT 134
Query: 80 LVVVVSKTFTTAETMLNARTLREWISTALGPSAVAKHMVAVSTNLTLVEK-FGIDPNNAF 138
L +V+SK+ TT ET+ N R R+W+ A KH VA STN + G + F
Sbjct: 135 LFIVISKSGTTLETLTNFRLARKWLEKKE--EAAKKHFVATSTNGGALAVLAGENGLETF 192
Query: 139 AFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGAWSIDQHFISAPYEKNIPVLLGLL 198
DWVGGRYSV SAVG+LPL+L G ++ L+GA + D+HF + P E+N+ VL L+
Sbjct: 193 EIPDWVGGRYSVLSAVGLLPLAL--GGIDFKELLEGAAAADEHFRTTPLEENLAVLYALI 250
Query: 199 SIWNVSFLGHPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEP 258
IW +F G ILPY LE F +QQ++MESNGK V G + F I +GEP
Sbjct: 251 GIWYYNFKGAEIEVILPYDPYLEYFPAWLQQLNMESNGKSVKGIGPEVNFHTDPISWGEP 310
Query: 259 GTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVG 317
GTNGQH+F+QL+HQG + P DFI + +S + + +HD+L+SNF AQ +ALA G
Sbjct: 311 GTNGQHAFFQLLHQGTDLKPADFIEIEESIEDLD------GHHDKLLSNFLAQTEALAFG 364
Query: 318 KTPEQLQKENVAPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHRIAVEGFIWGI 377
KT GNRPS +LL L Y +G L+A+YEH+ V+G +WGI
Sbjct: 365 KTLLAHTA--------------GNRPSNLILLRELTPYTLGALIALYEHKTFVQGVLWGI 410
Query: 378 NSFDQWGVELGKSLATQVRKQLH 400
NSFDQ GVELGK LA + +L
Sbjct: 411 NSFDQPGVELGKKLAFALLGKLG 433
>gnl|CDD|237608 PRK14095, pgi, glucose-6-phosphate isomerase; Provisional.
Length = 533
Score = 367 bits (943), Expect = e-123
Identities = 162/388 (41%), Positives = 238/388 (61%), Gaps = 30/388 (7%)
Query: 14 ATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSITG 73
+ GK VV +GIGGS LGP ++ AL+ + +++ F++NVDP D A+ ++
Sbjct: 146 SNGKKFTTVVQIGIGGSDLGPKALYLALKN-----YAKKDKRVHFISNVDPDDAAEVLSE 200
Query: 74 LNPETTLVVVVSKTFTTAETMLNARTLREWISTALGPSAVAKHMVAVSTNLTLVEKFGID 133
++ TL +VVSK+ TT ET N +R+ + A G KH +AV++ + ++ D
Sbjct: 201 IDLAKTLFIVVSKSGTTLETAANEEFVRDALKKA-GLDY-KKHFIAVTSEGSPMD----D 254
Query: 134 PNN---AFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGAWSIDQHFISAPYEKN 190
+ F WD +GGR+S S VG + L +GF V ++FLKGA ++D+ ++ +N
Sbjct: 255 ESGYLEVFHMWDSIGGRFSSTSMVGGVVLGFAFGFEVFKEFLKGAAAMDKAALNPNIREN 314
Query: 191 IPVLLGLLSIWNVSFLGHPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEA 250
+P+L L+ IWN +FLG+P A++PYSQALE+F H+QQ+ MESNGK V+ G P+ F+
Sbjct: 315 LPLLAALIGIWNRNFLGYPTTAVIPYSQALERFPAHLQQLDMESNGKSVNRFGEPINFKT 374
Query: 251 GEIDFGEPGTNGQHSFYQLIHQGR-VIPCDFIGVVKSQ--QPVYLKGEVVSNHDELMSNF 307
G I +GEPGTNGQHSF+QL+HQG ++P +FIG +SQ Q + ++G ++ +L +N
Sbjct: 375 GPIIWGEPGTNGQHSFFQLLHQGTDIVPVEFIGFKESQLGQDIVIQGS--TSQQKLFANL 432
Query: 308 FAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHR 367
AQ ALA GK P+K F GNRPS L+ L Y +G LLA YE++
Sbjct: 433 IAQIIALACGKENTN-----------PNKNFKGNRPSSLLVAKQLTPYTLGALLAHYENK 481
Query: 368 IAVEGFIWGINSFDQWGVELGKSLATQV 395
+ +GF W INSFDQ GV+LGK LA Q+
Sbjct: 482 VMFQGFCWNINSFDQEGVQLGKVLANQI 509
>gnl|CDD|240147 cd05016, SIS_PGI_2, Phosphoglucose isomerase (PGI) contains two SIS
(Sugar ISomerase) domains. This classification is based
on the alignment of the second SIS domain. PGI is a
multifunctional enzyme which as an intracellular dimer
catalyzes the reversible isomerization of glucose
6-phosphate to fructose 6-phosphate. As an extracellular
protein, PGI also has functions equivalent to
neuroleukin (NLK), autocrine motility factor (AMF), and
maturation factor (MF). Evidence suggests that PGI, NLK,
AMF, and MF are closely related or identical. NLK is a
neurotrophic growth factor that promotes regeneration
and survival of neurons. The dimeric form of NLK has
isomerase function, whereas its monomeric form carries
out neurotrophic activity. AMF is a cytokine that
stimulates cell migration and metastasis. MF mediates
the differentiation of human myeloid leukemic HL-60
cells to terminal monocytic cells.
Length = 164
Score = 234 bits (600), Expect = 3e-76
Identities = 86/188 (45%), Positives = 108/188 (57%), Gaps = 25/188 (13%)
Query: 209 PARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQ 268
A+LPYSQ LE+F +QQ+ MESNGK V+ DG P G I +G PGTN QHSF+Q
Sbjct: 1 KTHALLPYSQRLERFPAWLQQLDMESNGKSVTRDGEDYP--TGPIPWGAPGTNDQHSFFQ 58
Query: 269 LIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKEN 327
LIHQG + P DFI V K Q V + HD L++N A +AL
Sbjct: 59 LIHQGTKDKPVDFIAVKKPQNDVLDYLAGKTLHDLLLANCLATREALM------------ 106
Query: 328 VAPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVEL 387
F G RPS +++LP L Y +G LLA+YEH+ AV+G + GIN FDQ GVEL
Sbjct: 107 ----------FPGGRPSNTIVLPELTPYTLGALLALYEHKTAVQGALLGINPFDQPGVEL 156
Query: 388 GKSLATQV 395
GK LA ++
Sbjct: 157 GKKLAKKI 164
>gnl|CDD|240146 cd05015, SIS_PGI_1, Phosphoglucose isomerase (PGI) contains two SIS
(Sugar ISomerase) domains. This classification is based
on the alignment of the first SIS domain. PGI is a
multifunctional enzyme which as an intracellular dimer
catalyzes the reversible isomerization of glucose
6-phosphate to fructose 6-phosphate. As an extracellular
protein, PGI also has functions equivalent to
neuroleukin (NLK), autocrine motility factor (AMF), and
maturation factor (MF). Evidence suggests that PGI, NLK,
AMF, and MF are closely related or identical. NLK is a
neurotrophic growth factor that promotes regeneration
and survival of neurons. The dimeric form of NLK has
isomerase function, whereas its monomeric form carries
out neurotrophic activity. AMF is a cytokine that
stimulates cell migration and metastasis. MF mediates
the differentiation of human myeloid leukemic HL-60
cells to terminal monocytic cells.
Length = 158
Score = 191 bits (488), Expect = 1e-59
Identities = 72/148 (48%), Positives = 98/148 (66%), Gaps = 7/148 (4%)
Query: 15 TGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSITGL 74
+GK + DVV +GIGGS LGP V+ AL+ G +L F++NVDP D+A+ + L
Sbjct: 16 SGKKITDVVVIGIGGSDLGPRAVYEALKP-----YFKGGLRLHFVSNVDPDDLAELLKKL 70
Query: 75 NPETTLVVVVSKTFTTAETMLNARTLREWISTALGPSAVAKHMVAVSTNLTLVEK-FGID 133
+PETTL +V+SK+ TT ET+ NAR REW+ A G +AKH VA++ N + + K GI+
Sbjct: 71 DPETTLFIVISKSGTTLETLANARLAREWLEEAGG-DDLAKHFVAITDNGSGLLKKAGIE 129
Query: 134 PNNAFAFWDWVGGRYSVCSAVGVLPLSL 161
N F DWVGGR+SV S+VG LPL+L
Sbjct: 130 GLNTFEIPDWVGGRFSVLSSVGGLPLAL 157
>gnl|CDD|179193 PRK00973, PRK00973, glucose-6-phosphate isomerase; Provisional.
Length = 446
Score = 160 bits (407), Expect = 2e-44
Identities = 121/414 (29%), Positives = 180/414 (43%), Gaps = 65/414 (15%)
Query: 20 KDVVAVGIGGSFLGPLFVHTALQ---TDLEAIECARGRQLRFLANVDPIDVAKSITGLNP 76
+VV +GIGGS LG L +H AL + + E G ++ L NVDP A + ++
Sbjct: 72 DNVVVLGIGGSALGNLALHYALNPLNWNELSKEERNGPRVFVLDNVDPEKTASILDVIDL 131
Query: 77 ETTLVVVVSKTFTTAETMLNARTLREWISTALGPSAVAKHMVAVSTNLT------LVEKF 130
E TL V+SK+ TAET+ N +R + LG KH+V T+ + EK
Sbjct: 132 EKTLFNVISKSGNTAETLANYLIIRGILE-KLGLD-PKKHLVFT-TDPEKGKLKKIAEKE 188
Query: 131 GID----PNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSV-VEKFLKGAWSIDQHFISA 185
G P N VGGR+SV + VG+ P + +E+ L+GA +D+
Sbjct: 189 GYRTLEIPEN-------VGGRFSVLTPVGLAPA---AALGIDIEELLEGAKEMDKICEKE 238
Query: 186 PYEKNIPVLLGLLSIWNVSFLGHPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVP 245
KN +L L+ + G ++PYS+ L+ F +Q+ ES GK GV
Sbjct: 239 DIFKNPALLNALIHYLYYN-RGKNISVMMPYSERLKYFGDWYRQLWAESLGK----KGV- 292
Query: 246 LPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIPCD----FIGVVKSQQPVYLKGEVVSNHD 301
G+ G QHS QL +G P D F+ V K ++ V E+ ++
Sbjct: 293 -----GQTPVKALGATDQHSQLQLYMEG---PKDKIITFLKVEKYRRDV----EIPYEYE 340
Query: 302 ELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLL 361
++ + L+ EQ E RP++ + L LN Y +GQL
Sbjct: 341 DIEELSYLGGHKLSELINSEQKGTEIALTE--------NGRPNVKITLDELNEYTVGQLF 392
Query: 362 AIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFS 415
+YE + A G + IN+FDQ GVELGK + +A + R E
Sbjct: 393 YMYEMQTAFMGELLNINAFDQPGVELGKKIT-------YA-LLGRSGYEEEKKE 438
>gnl|CDD|237609 PRK14096, pgi, glucose-6-phosphate isomerase; Provisional.
Length = 528
Score = 158 bits (402), Expect = 4e-43
Identities = 119/395 (30%), Positives = 183/395 (46%), Gaps = 53/395 (13%)
Query: 13 GATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSIT 72
G+ DV+ +GIGGS LGP FV ALQ + G + F+ N DP + + +
Sbjct: 108 PPNGEKFTDVLWIGIGGSALGPQFVAEALQ------PNSDGLNIHFIDNTDPDGIDRVLA 161
Query: 73 GLNPE--TTLVVVVSKTFTTAET---MLNARTLREWISTALGPSAVAKHMVAVSTNLTLV 127
L TTLVVV+SK+ T ET ML A+ E A G A H VA++ + +
Sbjct: 162 ELGDRLATTLVVVISKSGGTPETRNGMLEAKAAYE----AAGLD-FASHAVAITMKGSKL 216
Query: 128 EKFGIDPN--NAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGAWSIDQHFISA 185
++ F WDWVGGR S SAVG+LP +LQ G + FL GA +D+
Sbjct: 217 DQLAQSEGWLARFPMWDWVGGRTSETSAVGLLPAALQ-GIDIRA-FLAGAKQMDEATRVP 274
Query: 186 PYEKNIPVLLGLLSIWNVSFLGHPAR--AILPYSQALEKFAPHIQQVSMESNGKGVSIDG 243
+ N LL L W + G + +LPY L F+ ++QQ+ MES GK + +DG
Sbjct: 275 DLKNNPAALLALA--WYYAGDGKGKKDMVVLPYKDRLLLFSRYLQQLVMESLGKELDLDG 332
Query: 244 VPLPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIP---CDFIGVVKSQQPVYLKGEVVSNH 300
+ G +G G+ QH++ Q + G + FI V++ +Q ++ E
Sbjct: 333 NVV--HQGIAVYGNKGSTDQHAYVQQLRDG--VDNFFVTFIEVLEDRQGSSIEVEPGVTS 388
Query: 301 DELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQL 360
+ +S F T + L + R S+++ +P +N +G L
Sbjct: 389 GDYLSGFLQ--------GTRQAL--------------YENGRQSITITIPEVNPRTLGAL 426
Query: 361 LAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQV 395
+A++E + + + IN++ Q GVE GK A +
Sbjct: 427 IALFERAVGLYASLVNINAYHQPGVEAGKKAAAAI 461
>gnl|CDD|235168 PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional.
Length = 410
Score = 127 bits (321), Expect = 1e-32
Identities = 121/403 (30%), Positives = 187/403 (46%), Gaps = 92/403 (22%)
Query: 19 LKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSITGLNPET 78
+K++V +GIGGS LG +++ L+ + ++L FL N DPI + K+++ +N E
Sbjct: 58 IKNIVVIGIGGSSLGVKAIYSFLKNEKN-----NKKELHFLENTDPISINKTLSKINLEN 112
Query: 79 TLVVVVSKTFTTAETMLNARTLREWISTALGPSA-VAKHMVAVSTNLTLVEKFGIDPNNA 137
TL +V+SK+ TT ET+ ++ +++ + + K+ + ++ + +E+F NN
Sbjct: 113 TLFIVISKSGTTIETI----SIFKYLLSHFKLDQELKKNFLFITDPDSKLEQFA-KENNI 167
Query: 138 FAFW--DWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGAWSIDQHFISAPYE------- 188
F VGGR+SV SAVG++PL+L G+ ++ L+GA + F +
Sbjct: 168 KCFNIPKNVGGRFSVLSAVGIVPLALC-GYD-IKALLEGAKACKDSFFEQKEDHILKKAY 225
Query: 189 -----KNIPVLLGLLSIWNVSFLGHPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDG 243
KN +I NV F YS AL+ F Q+ ES GK G
Sbjct: 226 FYATHKNA------YNI-NVLF---------SYSDALKGFNDWYVQLWGESLGK---KQG 266
Query: 244 ----VPL-PFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVY-----L 292
V L P G I G+ QHSF QLI +G R FI + Q L
Sbjct: 267 YKTRVGLTP--IGLI-----GSRDQHSFLQLIMEGPRDKTVTFIKIKDFQNAPKIPNISL 319
Query: 293 KG----EVVSNHD--ELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRPSLS 346
KG + V+ EL++ AQ DA T E L E++ +I
Sbjct: 320 KGLESLDFVNGVSFNELIN---AQCDA-----TMEALIAEDIPVDVI------------- 358
Query: 347 LLLPSLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGK 389
L L+ ++IG L+ YE + G + GIN++DQ GVE+GK
Sbjct: 359 -TLEKLDEFSIGYLIYYYELLTSAVGKMLGINTYDQPGVEVGK 400
>gnl|CDD|184504 PRK14097, pgi, glucose-6-phosphate isomerase; Provisional.
Length = 448
Score = 88.0 bits (219), Expect = 9e-19
Identities = 108/407 (26%), Positives = 165/407 (40%), Gaps = 100/407 (24%)
Query: 21 DVVAVGIGGSFLGPLFVHTALQTD---LEAIECARGRQLRFLAN-------VDPIDVAK- 69
+V +GIGGS+LG L L E + Q+ F N D ++ K
Sbjct: 75 VLVVIGIGGSYLGARAAIEFLNHSFYNLLPKEQRKAPQIIFAGNSISSTYLADLLEYLKD 134
Query: 70 ---SITGLNPETTLVVVVSKTFTTAETMLNARTLREWISTALGPSAVAKHMVAVSTN--- 123
SI V+SK+ TT E + R +E + G K + A T+
Sbjct: 135 KDFSI----------NVISKSGTTTEPAIAFRIFKELLEKKYGKEEAKKRIYAT-TDKAK 183
Query: 124 ---LTLV-----EKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGA 175
TL E F I P++ VGGR+SV +AVG+LP+++ G ++ +KGA
Sbjct: 184 GALKTLADAEGYETFVI-PDD-------VGGRFSVLTAVGLLPIAVA-GID-IDALMKGA 233
Query: 176 WSIDQHFISAPYEKNIPVLLGLLSIWNVSFLGHPARAILPYSQ-----ALEKFAPHIQ-- 228
+ + S+ +N R IL Y + L + P +Q
Sbjct: 234 ADARKDYSSSDLSENPAYQYAA------------VRNIL-YRKGYTTEILVNYEPSLQYF 280
Query: 229 -----QVSMESNGK-GVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIG 282
Q+ ES GK I F A +F + HS Q I +GR F
Sbjct: 281 SEWWKQLFGESEGKDQKGI------FPAS-ANF----STDLHSLGQYIQEGRRNL--FET 327
Query: 283 VVKSQQPVY---LKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFS 339
V+K ++P + E + D L N+ A GKT + + K+ L+ H
Sbjct: 328 VIKVEKPRKDLTIP-EDEEDLDGL--NYLA-------GKTVDFVNKKAFEGTLLAH--TD 375
Query: 340 GNRPSLSLLLPSLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVE 386
G P++ + +P L+ Y G L+ +E A+ G++ G+N FDQ GVE
Sbjct: 376 GGVPNIVVNIPELDEYTFGYLVYFFEKACAISGYLLGVNPFDQPGVE 422
>gnl|CDD|236551 PRK09533, PRK09533, bifunctional transaldolase/phosoglucose
isomerase; Validated.
Length = 948
Score = 78.5 bits (194), Expect = 2e-15
Identities = 101/401 (25%), Positives = 138/401 (34%), Gaps = 127/401 (31%)
Query: 20 KDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQ-----LRFLANVDPIDVAKSITGL 74
D V +G+GGS LGP E + G++ L L + DP V +
Sbjct: 456 TDAVVLGMGGSSLGP-----------EVLAETFGQRDGFPKLHVLDSTDPAQVRALEAAV 504
Query: 75 NPETTLVVVVSKTFTTAETMLNARTLREWISTALGPSAVAKHMVAVSTNLTLVEKFGIDP 134
+ TL +V SK+ T E + + LG A +H VAV+ DP
Sbjct: 505 DLARTLFIVSSKSGGTLEPNIFKDYFFARVKEVLGAKA-GRHFVAVT-----------DP 552
Query: 135 NNAFA-------FWDW------VGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGAW----S 177
++ F +GGRYSV S G++P + G V L A S
Sbjct: 553 GSSLEKVAKEDGFRKIFHGDPDIGGRYSVLSPFGLVPAAAA-GID-VRALLDSALAMVRS 610
Query: 178 IDQHFISAPYEKNIPVLLGLLSIWNVSFLGHPARA-----ILPYSQALEKFAPHIQQVSM 232
S P N V LGL LG A + S A+ F +Q+
Sbjct: 611 CGP---SVPPADNPGVQLGLA-------LGVAATQGRDKVTIVASPAIADFGAWAEQLIA 660
Query: 233 ESNGKG----VSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQ 288
ES GK + IDG PL G+P G F+
Sbjct: 661 ESTGKEGKGLIPIDGEPL---------GDPAVYGNDRV-------------FVY------ 692
Query: 289 PVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRPSLSLL 348
+ L GE + D ++ AL A H P + ++
Sbjct: 693 -LRLAGEADAAQDAALA-------ALE------------AAGH-----------PVVRIV 721
Query: 349 LPSLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGK 389
L S A +GQ +E AV G + GIN FDQ VE K
Sbjct: 722 LDS--AEQLGQEFFRWEMATAVAGAVLGINPFDQPDVEASK 760
>gnl|CDD|216165 pfam00871, Acetate_kinase, Acetokinase family. This family
includes acetate kinase, butyrate kinase and
2-methylpropanoate kinase.
Length = 387
Score = 34.3 bits (79), Expect = 0.13
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 16 GKVLKDVVAVGIGGSFLGPLFVHTALQTD--LEAI-ECARGRQLRFLANVDPIDVAKSIT 72
K L ++ A+G G F + L TD ++AI + L AN+ I++A +
Sbjct: 76 IKDLSEIDAIGHRVVHGGEKFTDSVLVTDEVVKAIKDGIPLAPLHNPANLIGIEIADKL- 134
Query: 73 GLNPETTLVVVVSKTFTTAETM 94
P V V F TM
Sbjct: 135 --LPPVKNVAVFDTAFHQ--TM 152
>gnl|CDD|240224 cd05798, SIS_TAL_PGI, SIS_TAL_PGI: Transaldolase (TAL)/
Phosphoglucose isomerase (PGI). This group represents
the SIS (Sugar ISomerase) PGI domain, of a
multifunctional protein (TAL-PGI ) having both TAL and
PGI activities. TAL_PGI contains an N-terminal TAL
domain and a C-terminal PGI domain. TAL catalyzes the
reversible conversion of sedoheptulose-7-phosphate (S7P)
and glyceraldehyde-3-phosphate (G3P), to
fructose-6-phosphate (F6P) and erythrose-4-phosphate
(E4P). PGI catalyzes the reversible isomerization of F6P
to glucose-6-phosphate (G6P). It has been suggested for
Gluconobacter oxydans TAL_PGI that this enzyme generates
E4P and G6P directly from S7P and G3P. G. oxydans
TAL_PGI contributes to increased xylitol production from
D-arabitol. As xylitol is an alternative natural
sweetner to sucrose, the microbial conversion of
D-arabitol to xylitol is of interest to food and
pharmaceutical industries.
Length = 129
Score = 32.0 bits (73), Expect = 0.24
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 354 AYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQ 394
AY++GQ +E AV G + GIN FDQ VE K +
Sbjct: 88 AYDLGQEFFRWEMATAVAGAVLGINPFDQPDVEASKIETRR 128
>gnl|CDD|179373 PRK02118, PRK02118, V-type ATP synthase subunit B; Provisional.
Length = 436
Score = 31.5 bits (72), Expect = 0.95
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 41/126 (32%)
Query: 203 VSFLGHPARAILPYSQAL--EKFAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGT 260
V FLG P + + YS++L +F NG G IDG P I+ G P
Sbjct: 67 VVFLGRPMQ--VTYSESLLGRRF-----------NGSGKPIDGGPELEG-EPIEIGGPSV 112
Query: 261 NGQHSFYQLIHQGRVIPCDFIG-----------VVKSQQ-PVY-LKGEVVSNHDELMSNF 307
N R++P + I +V+SQ+ P++ + GE ++ L++
Sbjct: 113 NPVK---------RIVPREMIRTGIPMIDVFNTLVESQKIPIFSVSGE---PYNALLARI 160
Query: 308 FAQPDA 313
Q +A
Sbjct: 161 ALQAEA 166
>gnl|CDD|224078 COG1156, NtpB, Archaeal/vacuolar-type H+-ATPase subunit B [Energy
production and conversion].
Length = 463
Score = 30.4 bits (69), Expect = 2.1
Identities = 20/81 (24%), Positives = 26/81 (32%), Gaps = 24/81 (29%)
Query: 203 VSFLGHPARAILPYSQAL--EKFAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGT 260
V F G + +P S+ L F NG G IDG P +D
Sbjct: 72 VRFTGETLK--IPVSEDLLGRIF-----------NGSGKPIDGGPEIVPEDRLDINGAPI 118
Query: 261 NGQHSFYQLIHQGRVIPCDFI 281
N R+ P +FI
Sbjct: 119 NP---------YARIYPEEFI 130
>gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase;
Provisional.
Length = 188
Score = 28.9 bits (65), Expect = 3.8
Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 10/108 (9%)
Query: 42 QTDLE----AIECARGRQLRFLANVDP---IDVAKSITGLNPETTLVVVVSKTFTTAETM 94
Q DL+ A E + L +V+P I+V K+ G P + V AE +
Sbjct: 63 QADLDPHALAREKTEAVKSMLLDSVEPLPLIEVVKAWHGRRP---MAVGTGSESAIAEAL 119
Query: 95 LNARTLREWISTALGPSAVAKHMVAVSTNLTLVEKFGIDPNNAFAFWD 142
L LR + + V H A T L + G+ P F D
Sbjct: 120 LAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFED 167
>gnl|CDD|233259 TIGR01070, mutS1, DNA mismatch repair protein MutS. [DNA
metabolism, DNA replication, recombination, and repair].
Length = 840
Score = 29.7 bits (67), Expect = 3.9
Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 27/152 (17%)
Query: 107 ALGPSAVAKHMVAVSTNLTLVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYG-- 164
AL P + A++ FG+ A D G + V + Y
Sbjct: 114 ALLPERQDNLLAAIAQE---SNGFGL------ATLDLTTGEFKVT---ELADKETLYAEL 161
Query: 165 FSV--VEKFLKGAWSIDQHFISAPYEKNIPVL----------LGLLSIWNVSFLGHPARA 212
+ E L S + + K+ V+ LG L + N A
Sbjct: 162 QRLNPAEVLLAEDLSEMEAIELREFRKDTAVMSLEAQFGTEDLGGLGLRNAPLGLTAAGC 221
Query: 213 ILPYSQALEKFA-PHIQQVSMESNGKGVSIDG 243
+L Y++ ++ A PH+Q V + + +D
Sbjct: 222 LLQYAKRTQRTALPHLQPVRLYELQDFMQLDA 253
>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional.
Length = 273
Score = 29.1 bits (66), Expect = 4.5
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Query: 12 VGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPIDVAKSI 71
VG T ++ G+ S + P FV+T L A+G NV+P DVA +I
Sbjct: 158 VGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG---AKG-----FKNVEPEDVAAAI 209
Query: 72 TGL--NPETTLVVVVSKTFTTAETMLNARTLREWISTALGPSAV 113
G P + V + L R +RE ++ LG V
Sbjct: 210 VGTVAKPRPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDRV 253
>gnl|CDD|222346 pfam13728, TraF, F plasmid transfer operon protein. TraF protein
undergoes proteolytic processing associated with export.
The 19 amino acids at the amino terminus of the
polypeptides appear to constitute a typical membrane
leader peptide - not included in this family, while the
remainder of the molecule is predicted to be primarily
hydrophilic in character. F plasmid TraF and TraH are
required for F pilus assembly and F plasmid transfer,
and they are both localised to the outer membrane in the
presence of the complete F transfer region, especially
TraV, the putative anchor.
Length = 215
Score = 28.7 bits (65), Expect = 4.6
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 7/36 (19%)
Query: 215 PYSQALEKFAPHIQQVSMESNG---KGVSIDGVPLP 247
PY QA AP +Q + + G VS+DG PLP
Sbjct: 133 PYCQA---QAPILQAFA-DKYGFSVIPVSVDGGPLP 164
>gnl|CDD|215535 PLN02990, PLN02990, Probable pectinesterase/pectinesterase
inhibitor.
Length = 572
Score = 29.2 bits (65), Expect = 5.8
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 333 IPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHRIAVEG 372
+ H TF G+ P+ + + SLN Y IG++ +A+ G
Sbjct: 308 MTHVTFIGDGPTKTKITGSLNFY-IGKVKTYLTATVAING 346
>gnl|CDD|224936 COG2025, FixB, Electron transfer flavoprotein, alpha subunit
[Energy production and conversion].
Length = 313
Score = 28.7 bits (65), Expect = 6.0
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Query: 10 WQVGATGKVLK-DV-VAVGIGG 29
QVG TGK + + +A+GI G
Sbjct: 241 RQVGQTGKTVAPKLYIALGISG 262
>gnl|CDD|225172 COG2263, COG2263, Predicted RNA methylase [Translation, ribosomal
structure and biogenesis].
Length = 198
Score = 28.0 bits (63), Expect = 7.4
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 26 GIGGSFLGPLFVHTALQTDLEAIECARGRQLRFLANVDPI 65
IG + LG V A+ D EA+E AR L +V+ +
Sbjct: 60 AIGAALLGASRV-LAVDIDPEALEIARANAEELLGDVEFV 98
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.137 0.413
Gapped
Lambda K H
0.267 0.0779 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 22,775,764
Number of extensions: 2229896
Number of successful extensions: 1898
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1857
Number of HSP's successfully gapped: 38
Length of query: 441
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 341
Effective length of database: 6,502,202
Effective search space: 2217250882
Effective search space used: 2217250882
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (27.2 bits)