Your job contains 1 sequence.
>013565
MIGIDYEMGNIISNTGSNQAVKLHFSTTYASNSSSSPSSASSHHHHYTTQTQQLLPLTTH
HQNYNKQQQPQMGSWLLGKTTTTTTAAELEDVSNEEETAAPTKEQAIIMQETKDIIEEGE
AEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDR
NGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDWRRR
SHPPAAAAASFSRHLPFYRSIPWNPLLMMRPPVLPASMYSQSQINNNFYNRNSISLGGTG
NNNNVLSTRTLGSILYLRSQLPAAPATQQPPPPPPPPHTEIGMTKWQQHPIVFDSVPVVQ
GKATAKRLRLFGVNMDCPITESDDECHILSSSTSIQHATMAIHDQPSQLSSSSQLSLYDA
TPLLPPFDFLNKGKASMSFD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013565
(440 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 507 4.2e-55 2
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 501 1.8e-54 2
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 469 3.7e-50 2
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 413 2.0e-43 2
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 404 4.1e-43 2
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 411 5.2e-43 2
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 391 1.4e-40 2
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 393 8.3e-39 2
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 405 8.9e-38 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 371 2.2e-36 2
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 371 3.6e-34 1
TAIR|locus:2015832 - symbol:AT1G50680 species:3702 "Arabi... 249 7.9e-24 2
TAIR|locus:2026058 - symbol:AT1G51120 species:3702 "Arabi... 244 1.4e-19 1
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 185 2.0e-11 1
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 178 7.6e-11 2
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 181 8.4e-11 1
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 179 1.4e-10 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 179 1.4e-10 1
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 179 2.4e-10 2
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 174 3.4e-10 1
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 172 5.7e-10 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 167 4.0e-09 2
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 165 4.1e-09 1
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 163 7.3e-09 1
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 143 6.9e-08 1
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 152 9.3e-08 2
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 152 9.9e-08 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 146 1.9e-07 1
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 147 3.1e-07 1
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 147 3.4e-07 1
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 145 3.5e-07 1
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 148 5.1e-07 1
UNIPROTKB|A4LBC0 - symbol:LFL1 "B3 domain-containing prot... 140 1.1e-06 1
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 141 1.7e-06 1
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 142 2.2e-06 1
TAIR|locus:2032170 - symbol:LEC2 "LEAFY COTYLEDON 2" spec... 134 4.3e-06 1
TAIR|locus:2088439 - symbol:FUS3 "FUSCA 3" species:3702 "... 131 6.8e-06 1
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 141 1.0e-05 2
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 140 1.2e-05 2
TAIR|locus:2093166 - symbol:ABI3 "AT3G24650" species:3702... 134 1.3e-05 1
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 140 1.3e-05 2
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 137 1.7e-05 2
UNIPROTKB|P37398 - symbol:VP1 "B3 domain-containing prote... 128 5.9e-05 1
TAIR|locus:2057579 - symbol:AT2G33720 species:3702 "Arabi... 117 0.00029 1
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 507 (183.5 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 100/130 (76%), Positives = 108/130 (83%)
Query: 112 TKDIIEEGE---AEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS 168
T+D EE AEE+ ++EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSSS
Sbjct: 8 TRDEDEEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSS 67
Query: 169 NEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDL 228
NEKGLLLNFED GK WRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGD+VSF R VGD
Sbjct: 68 NEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDS 127
Query: 229 AK-GRLFIDW 237
+ RLFIDW
Sbjct: 128 GRDSRLFIDW 137
Score = 79 (32.9 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 34/102 (33%), Positives = 51/102 (50%)
Query: 350 PIVFDSVPVVQ-GKA------TA-KRLRLFGVNMDCPITESDDECHILSSSTSIQHATMA 401
P+V +SVPV+ G+A TA KRLRLFGV+M+C ES +++ST + ++ +
Sbjct: 214 PLVIESVPVMMHGRANQELVGTAGKRLRLFGVDMECG--ESG-----MTNSTE-EESSSS 265
Query: 402 IHDQPXXXXXXXXXXXYDATPLLPPFD---FLNKGKASMSFD 440
P + L + F KGK+S+SFD
Sbjct: 266 GGSLPRGGGGGASSSSFFQLRLGSSSEDDHFTKKGKSSLSFD 307
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 501 (181.4 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 90/108 (83%), Positives = 101/108 (93%)
Query: 131 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYS 190
EKEHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLDSS+N+ G LLNF+DRNGK WRFRYS
Sbjct: 51 EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110
Query: 191 YWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLA-KGRLFIDW 237
YWNSSQSYVMTKGWSRFVK+KKLDAGD+VSF RG+GD + + +L+IDW
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDW 158
Score = 79 (32.9 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 350 PIVFDSVPVVQGKAT--------------AKRLRLFGVNMDC 377
P+V DSVPVV G+ T KRLRLFGVNM+C
Sbjct: 252 PLVIDSVPVVPGRLTPVMLPPLPPPPSTAGKRLRLFGVNMEC 293
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 469 (170.2 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 91/124 (73%), Positives = 103/124 (83%)
Query: 117 EEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS-NE--KGL 173
E+ E + S+E+EHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLD+S+ N+ KGL
Sbjct: 4 EDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGL 63
Query: 174 LLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRL 233
LLNFEDR+G WRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGD+VSF R K +L
Sbjct: 64 LLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRD--SCNKDKL 121
Query: 234 FIDW 237
+IDW
Sbjct: 122 YIDW 125
Score = 70 (29.7 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 32/113 (28%), Positives = 47/113 (41%)
Query: 347 QQHPI-VFDSVPVV-QGKATA--------KRLRLFGVNMDC-----PITESDDECHILSS 391
+ HP V +SVPV+ Q +A KRLRLFGV+M+C + +++E
Sbjct: 184 RSHPTAVIESVPVMMQRRAQVASMASRGEKRLRLFGVDMECGGGGGSVNSTEEESSSSGG 243
Query: 392 STSIQHATM----AIHDQPXXXXXXXXXXXYDATPLLPPFDFLNKGKASMSFD 440
S +M ++ +A L F KGK S+SFD
Sbjct: 244 SIPRGRVSMVGAGSLLQLRLVSSDDESLVAMEAASLEDHHFFTKKGKPSLSFD 296
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 413 (150.4 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 80/110 (72%), Positives = 90/110 (81%)
Query: 131 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSN---EKGLLLNFEDRNGKPWRF 187
EKE +F+K +TPSDVGKLNRLVIPKQHAE+YFPL +++ EKGLLL FED GKPWRF
Sbjct: 33 EKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRF 92
Query: 188 RYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 237
RYSYWNSSQSYV+TKGWSR+VK+K LDAGDVV FHR D GR FI W
Sbjct: 93 RYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSD--GGRFFIGW 140
Score = 62 (26.9 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 362 KATAKRLRLFGVNMDCPITESD 383
+ +K LRLFGVNM+C + +SD
Sbjct: 177 RGNSKTLRLFGVNMECQL-DSD 197
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 404 (147.3 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 81/116 (69%), Positives = 91/116 (78%)
Query: 132 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL----------DSSSNEKGLLLNFEDRN 181
KE +F+K +TPSDVGKLNRLVIPKQHAEKYFPL D+SS+EKG+LL+FED +
Sbjct: 42 KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101
Query: 182 GKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 237
GK WRFRYSYWNSSQSYV+TKGWSRFVKDK+LD GDVV F R D RLFI W
Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSD--SRRLFIGW 155
Score = 68 (29.0 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 22/104 (21%), Positives = 44/104 (42%)
Query: 291 RNSISLGGTGNNNNVLSTRTLGSILYLRSQLXXXXXXXXXXXXXXXXHTEIGM-TKWQQH 349
R S N+ ++T ++G++ Y Q+ H + T + H
Sbjct: 158 RGQGSSSSVAATNSAVNTSSMGALSY--HQIHATSNYSNPPSHSEYSHYGAAVATAAETH 215
Query: 350 PIVFDSVPVVQGKATAKRLRLFGVNMDCPITESDDECHILSSST 393
S P +++ +RLFGVN++C + E+D + + ++T
Sbjct: 216 -----STPSSSVVGSSRTVRLFGVNLECQMDENDGDDSVAVATT 254
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 411 (149.7 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 83/135 (61%), Positives = 98/135 (72%)
Query: 110 QETKDIIEEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSN 169
QE +I + S +EHMFDKV+TPSDVGKLNRLVIPKQHAE +FPL+ N
Sbjct: 10 QELAEIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLED--N 67
Query: 170 EKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGV--GD 227
+ G +L+F+D+NGK WRFRYSYWNSSQSYVMTKGWSRFVK+KKL AGD VSF+RG D
Sbjct: 68 QNGTVLDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIPDD 127
Query: 228 LAKGR-----LFIDW 237
A+ +FIDW
Sbjct: 128 NAQPERRRKIMFIDW 142
Score = 60 (26.2 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 347 QQHPIVFDSVPVVQ-GK---------ATAKRLRLFGVNMD 376
+ P+V+DSVPV G+ +T K+LRLFGV+++
Sbjct: 230 RSEPLVYDSVPVFPAGRVPPSAPPQPSTTKKLRLFGVDVE 269
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 391 (142.7 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 78/118 (66%), Positives = 93/118 (78%)
Query: 131 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSN-----------EKGLLLNFED 179
++E +F+K +TPSDVGKLNRLVIPKQHAEKYFPL++++N EKG+LL+FED
Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED 83
Query: 180 RNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 237
+GK W+FRYSYWNSSQSYV+TKGWSR+VKDK LDAGDVV F R DL RLFI W
Sbjct: 84 ESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLH--RLFIGW 139
Score = 57 (25.1 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 357 PVVQGKATAKRLRLFGVNMDC 377
PVV G +++ +RLFGVN++C
Sbjct: 204 PVVAG--SSRTVRLFGVNLEC 222
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 393 (143.4 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 77/106 (72%), Positives = 87/106 (82%)
Query: 133 EHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS-NEKGLLLNFEDRNGKPWRFRYSY 191
E +F+K VTPSDVGKLNRLVIPK HAEK+FPL SS+ + KG+LLNFED NGK WRFRYSY
Sbjct: 185 EALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSY 244
Query: 192 WNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 237
WNSSQSYV+TKGWSRFVK+K L AGDVVSF R G +L+I W
Sbjct: 245 WNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQ--DQQLYIGW 288
Score = 38 (18.4 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 368 LRLFGVNMDCPITESD 383
LRLFGVN+ + +D
Sbjct: 302 LRLFGVNISPESSRND 317
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 81/118 (68%), Positives = 96/118 (81%)
Query: 122 EEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNE--KGLLLNFED 179
+ D+VL + +E +F+K VTPSDVGKLNRLVIPKQHAEK+FPL S S KG+L+NFED
Sbjct: 176 QNDKVLKT--REVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFED 233
Query: 180 RNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 237
NGK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVV+F R G L + +L+IDW
Sbjct: 234 VNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTG-LER-QLYIDW 289
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 371 (135.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 78/130 (60%), Positives = 91/130 (70%)
Query: 116 IEEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS-------- 167
+E D VL + +E +F+K VTPSDVGKLNRLVIPKQHAEK+FPL +
Sbjct: 177 LETATYGNDAVLRA--REVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNP 234
Query: 168 SNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGD 227
S KG+L+N EDR GK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVV F R G
Sbjct: 235 SPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGP 294
Query: 228 LAKGRLFIDW 237
+L+I W
Sbjct: 295 --DRQLYIHW 302
Score = 37 (18.1 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 94 NEEETAAPTKEQAIIMQETKDIIEEGEAEED 124
NEEE AA + + A+ +D + +++ D
Sbjct: 100 NEEEEAASSYDIAVRRFRGRDAVTNFKSQVD 130
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 73/108 (67%), Positives = 85/108 (78%)
Query: 133 EHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNE---KGLLLNFEDRNGKPWRFRY 189
E +F+K VTPSDVGKLNRLVIPK AEK+FPL +N KG+LLNFED NGK WRFRY
Sbjct: 180 ELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRY 239
Query: 190 SYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 237
SYWNSSQSYV+TKGWSRFVK+K+L AGD++SF R D + + FI W
Sbjct: 240 SYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRS-NDQDQ-KFFIGW 285
>TAIR|locus:2015832 [details] [associations]
symbol:AT1G50680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PRINTS:PR00367
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC079279 HSSP:Q9ZWM9 KO:K09287 EMBL:AY560882
IPI:IPI00527323 PIR:E96543 RefSeq:NP_175483.1 UniGene:At.50579
ProteinModelPortal:Q9C6P5 SMR:Q9C6P5 PaxDb:Q9C6P5 PRIDE:Q9C6P5
EnsemblPlants:AT1G50680.1 GeneID:841490 KEGG:ath:AT1G50680
TAIR:At1g50680 eggNOG:NOG331833 HOGENOM:HOG000090522
InParanoid:Q9C6P5 OMA:GEVNQES PhylomeDB:Q9C6P5
ProtClustDB:CLSN2682911 Genevestigator:Q9C6P5 Uniprot:Q9C6P5
Length = 337
Score = 249 (92.7 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 50/99 (50%), Positives = 66/99 (66%)
Query: 135 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPL---DSSSNEKGLLLN--------FEDRNGK 183
+F K +TPSDVGKLNRLVIPK++A KY P D S E+G ++ F DR +
Sbjct: 156 LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAMR 215
Query: 184 PWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFH 222
W+FRY YW SSQS+V T+GW+ FVK+K L DV++F+
Sbjct: 216 QWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFY 254
Score = 39 (18.8 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 370 LFGVNMDCP 378
LFGV ++CP
Sbjct: 329 LFGVRIECP 337
>TAIR|locus:2026058 [details] [associations]
symbol:AT1G51120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC079828
HSSP:Q9ZWM9 KO:K09287 HOGENOM:HOG000090522 ProtClustDB:CLSN2682911
EMBL:AY560883 IPI:IPI00548594 PIR:F96548 RefSeq:NP_175524.1
UniGene:At.50656 ProteinModelPortal:Q9C688 SMR:Q9C688 PRIDE:Q9C688
DNASU:841535 EnsemblPlants:AT1G51120.1 GeneID:841535
KEGG:ath:AT1G51120 TAIR:At1g51120 eggNOG:NOG252474
InParanoid:Q9C688 OMA:EEMKTET PhylomeDB:Q9C688
Genevestigator:Q9C688 Uniprot:Q9C688
Length = 352
Score = 244 (91.0 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 54/120 (45%), Positives = 75/120 (62%)
Query: 112 TKDIIEEGEA-EEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL---DSS 167
+K ++ GE +E S + +F K +TPSDVGKLNRLVIPK++A KY P D S
Sbjct: 155 SKQVLGGGEGGQESNKCFSCTQ--LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQS 212
Query: 168 SNE--KGLL---LNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFH 222
E +G+ + F DR + W+FRY YW SSQS+V T+GW+ FVK+K L D++ F+
Sbjct: 213 EKETSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFY 272
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 185 (70.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 57/154 (37%), Positives = 74/154 (48%)
Query: 91 DVS-NEEETAAPTKEQAIIMQETKDI---IEEG-----EAEED-RVLISLEKEHMFDKVV 140
DV + E T Q ++ E++DI + EG EED VL HMF K +
Sbjct: 104 DVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTL 163
Query: 141 TPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYV 199
T SD +P++ AE FP LD S L D +G WRFR+ Y + ++
Sbjct: 164 TASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHL 223
Query: 200 MTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRL 233
+T GWS FV KKL +GD V F RG D K RL
Sbjct: 224 LTTGWSAFVNKKKLVSGDAVLFLRG--DDGKLRL 255
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 178 (67.7 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 50/149 (33%), Positives = 75/149 (50%)
Query: 86 AAELEDVSNEEETAAPTKEQAIIMQETKDIIEEGEAEED-RVLISLEKEHMFDKVVTPSD 144
A L+ +N +ET A + +M +T ++ + E R L++ F KV+T SD
Sbjct: 84 AIHLKVENNSDETYA----EITLMPDTTQVVIPTQNENQFRPLVN-----SFTKVLTASD 134
Query: 145 VGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKG 203
+PK+HA + P LD S L D +G WRF ++Y + Q +++T G
Sbjct: 135 TSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTG 194
Query: 204 WSRFVKDKKLDAGDVVSFHRG-VGDLAKG 231
W+ F KKL AGDV+ F RG G+L G
Sbjct: 195 WNAFTTSKKLVAGDVIVFVRGETGELRVG 223
Score = 43 (20.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 364 TAKRLRLFGVNMDCP 378
T RLFGV +D P
Sbjct: 453 TGTNFRLFGVTLDTP 467
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 181 (68.8 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 45/131 (34%), Positives = 67/131 (51%)
Query: 98 TAAPTKEQAIIMQETKDIIEEGEAEEDRVLISLEKE-HMFDKVVTPSDVGKLNRLVIPKQ 156
T P +E +++ E K++ E G EE S+++ HMF K +T SD +P++
Sbjct: 138 TLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTASDTSTHGGFSVPRR 197
Query: 157 HAEKYF-PLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDA 215
AE F PLD L +D +G W+FR+ Y + +++T GWS FV K L +
Sbjct: 198 AAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVS 257
Query: 216 GDVVSFHRGVG 226
GD V F R G
Sbjct: 258 GDAVLFLRDEG 268
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/91 (41%), Positives = 59/91 (64%)
Query: 135 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW-- 192
+F+KV++ SD G++ RLV+PK AE YFP S +GL L +D GK W F++ +W
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFP--PISLPEGLPLKIQDIKGKEWVFQFRFWPN 342
Query: 193 NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHR 223
N+S+ YV+ +G + ++ +L AGD V+F R
Sbjct: 343 NNSRMYVL-EGVTPCIQSMQLQAGDTVTFSR 372
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 37/91 (40%), Positives = 58/91 (63%)
Query: 135 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW-- 192
+F+K ++ SD G++ RLV+PK AE YFP S S +G+ L +D G+ W F++ YW
Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQS--EGIPLKIQDVRGREWTFQFRYWPN 351
Query: 193 NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHR 223
N+S+ YV+ +G + ++ L AGD V+F R
Sbjct: 352 NNSRMYVL-EGVTPCIQSMMLQAGDTVTFSR 381
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 179 (68.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 52/149 (34%), Positives = 77/149 (51%)
Query: 86 AAELEDVSNEEETAAPTKEQAIIMQETKDIIEEGEAEED-RVLISLEKEHMFDKVVTPSD 144
A L+ +N +ET A + +M +T ++ ++E R L++ F KV+T SD
Sbjct: 84 AIHLKVENNSDETYA----EITLMPDTTQVVIPTQSENQFRPLVN-----SFTKVLTASD 134
Query: 145 VGKLNRLVIPKQHA-EKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKG 203
+PK+HA E PL + E LL +D +G WRFR+SY + Q + +T G
Sbjct: 135 TSAYGGFFVPKKHAIECLPPLPLPAQE--LLA--KDLHGNQWRFRHSYRGTPQRHSLTTG 190
Query: 204 WSRFVKDKKLDAGDVVSFHRG-VGDLAKG 231
W+ F KKL GDV+ F RG G+L G
Sbjct: 191 WNEFTTSKKLVKGDVIVFVRGETGELRVG 219
Score = 37 (18.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 369 RLFGVNMDCPITESD 383
RLFGV++ P+ D
Sbjct: 442 RLFGVSLAIPLVIKD 456
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 51/149 (34%), Positives = 76/149 (51%)
Query: 86 AAELEDVSNEEETAAPTKEQAIIMQETKDIIEEGEAEED-RVLISLEKEHMFDKVVTPSD 144
A +L+ +N +ET A + +M +T ++ + E R L++ F KV+T SD
Sbjct: 84 AIQLKVENNSDETYA----EITLMPDTTQVVIPTQNENQFRPLVN-----SFTKVLTASD 134
Query: 145 VGKLNRLVIPKQHA-EKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKG 203
+PK+HA E PLD S L D +G WRF ++Y + Q +++T G
Sbjct: 135 TS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTG 192
Query: 204 WSRFVKDKKLDAGDVVSFHRG-VGDLAKG 231
W+ F KKL AGDV+ F RG G+L G
Sbjct: 193 WNAFTTSKKLVAGDVIVFVRGETGELRVG 221
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 172 (65.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 50/148 (33%), Positives = 75/148 (50%)
Query: 86 AAELEDVSNEEETAAPTKEQAIIMQETKDIIEEGEAEEDRVLISLEKEHMFDKVVTPSDV 145
A +L+ +N +ET A E ++ T+ +I + R L++ F KV+T SD
Sbjct: 84 AIQLKVENNSDETYA---EITLMPDTTQVVIPTQNQNQFRPLVN-----SFTKVLTASDT 135
Query: 146 GKLNRLVIPKQHA-EKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGW 204
+PK+HA E PLD S + D +G WRFR+ Y ++Q +++T GW
Sbjct: 136 SVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGW 195
Query: 205 SRFVKDKKLDAGDVVSFHRG-VGDLAKG 231
+ F KKL GDV+ F RG G+L G
Sbjct: 196 NAFTTSKKLVEGDVIVFVRGETGELRVG 223
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 167 (63.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 48/149 (32%), Positives = 74/149 (49%)
Query: 86 AAELEDVSNEEETAAPTKEQAIIMQETKDIIEEGEAEED-RVLISLEKEHMFDKVVTPSD 144
A L+ +N +E A + +M +T ++ ++E R L++ F KV+T SD
Sbjct: 84 AIHLKVENNSDEIYA----EITLMPDTTQVVIPTQSENRFRPLVN-----SFTKVLTASD 134
Query: 145 VGKLNRLVIPKQHA-EKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKG 203
+PK+HA E PLD S + D + WRFR++Y + Q + +T G
Sbjct: 135 TSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTG 194
Query: 204 WSRFVKDKKLDAGDVVSFHRG-VGDLAKG 231
W+ F+ KKL GDV+ F RG G+L G
Sbjct: 195 WNEFITSKKLVKGDVIVFVRGETGELRVG 223
Score = 39 (18.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 369 RLFGVNMDCP 378
RLFGV +D P
Sbjct: 458 RLFGVTLDTP 467
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 165 (63.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 42/118 (35%), Positives = 60/118 (50%)
Query: 117 EEGEAEEDRVLIS-LEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLL 174
E G+ E+ S EK F K +T SD +P+ AE FP LD ++
Sbjct: 100 EYGDGEDSNGFESNSEKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQT 159
Query: 175 LNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGV-GDLAKG 231
+ +D +G W+FR+ Y + + +++T GWS FV KKL AGD + F R GDL G
Sbjct: 160 ILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVG 217
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 163 (62.4 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 39/103 (37%), Positives = 55/103 (53%)
Query: 131 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRY 189
EK F K +T SD +P+ AE FP LD S+ + +D +G+ W+FR+
Sbjct: 110 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRH 169
Query: 190 SYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGV-GDLAKG 231
Y + + +++T GWS FV KKL AGD + F R GDL G
Sbjct: 170 IYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVG 212
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 143 (55.4 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 48/149 (32%), Positives = 68/149 (45%)
Query: 86 AAELEDVSNEEETAAPTKEQAIIMQETKDIIEEGEAEED-RVLISLEKEHMFDKVVTPSD 144
A L+ +N +ET + +M +T ++ E E R +++ F KV+T SD
Sbjct: 84 AIHLKVENNSDETYV----EITLMPDTTQVVIPTENENQFRPIVN-----SFTKVLTASD 134
Query: 145 VGKLNRLVIPKQHA-EKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKG 203
+P +HA E PLD S L D +G WRF++SY T G
Sbjct: 135 TSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYRVPRGD---TTG 191
Query: 204 WSRFVKDKKLDAGDVVSFHRG-VGDLAKG 231
W+ F KKL GDV+ F RG G+L G
Sbjct: 192 WNAFTTSKKLVVGDVIVFARGETGELRVG 220
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 152 (58.6 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 132 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYS 190
K H F KV+T SD + ++HA + P LD + L ED +G W+F++
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 191 YWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGV-GDLAKG 231
+ + +++T GWS FV K+L AGD F RG G+L G
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVG 213
Score = 43 (20.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 15/51 (29%), Positives = 20/51 (39%)
Query: 357 PVVQGKA-TAKRLRLFGVNMDCPITESDDECHILSSSTSIQHATMAIHDQP 406
PV Q K T RLFG+++ +E +I TM H P
Sbjct: 441 PVEQKKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDP 491
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 152 (58.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 43/143 (30%), Positives = 67/143 (46%)
Query: 91 DVSNEEETAAPTKEQAIIMQETKDIIEEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNR 150
DV+ + E I +Q +D E + V + ++ H F K++T SD
Sbjct: 83 DVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHGG 142
Query: 151 LVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVK 209
+ ++HA + P LD + L D +G WRF++ + + +++T GWS FV
Sbjct: 143 FSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVS 202
Query: 210 DKKLDAGDVVSFHRGV-GDLAKG 231
K+L AGD F RG GDL G
Sbjct: 203 SKRLVAGDAFVFLRGENGDLRVG 225
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/150 (31%), Positives = 73/150 (48%)
Query: 93 SNEEETAAPTKEQAIIMQETKDIIEEGEAEED----RVLISLEKEHMFDKVVTPSDVGKL 148
S+E ET E ET + E + D ++L S E + + K +T SDVG +
Sbjct: 209 SDELETRNSNVE---FHSETVGTLPESKQGHDSRATKLLNSGEYQVILRKELTKSDVGNV 265
Query: 149 NRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRN-GKPWRFRYSYW--NSSQSYVMTKGWS 205
R+V+PK+ AE P L+L+ +D W+F+Y YW N S+ Y++
Sbjct: 266 GRIVLPKKDAEASLP--PLLQRDPLILHMDDMVLPVTWKFKYRYWPNNKSRMYILDSA-G 322
Query: 206 RFVKDKKLDAGDVVSFHRGVGDLAKGRLFI 235
F+K L AGDV+ ++ +LA G+ I
Sbjct: 323 EFLKTHGLQAGDVIIIYK---NLAPGKFII 349
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 42/131 (32%), Positives = 65/131 (49%)
Query: 105 QAIIMQETKDIIEEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP- 163
Q +M +T +++ + R I + F K++T SDV L+IPKQ+A + FP
Sbjct: 97 QISLMPDTTEVMTHNTTMDTRRPIV----YFFSKILTASDVSLSGGLIIPKQYAIECFPP 152
Query: 164 LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKG--WSRFVKDKKLDAGDVVSF 221
LD S L +D G+ W F++ + + Q ++ T G WS F K+L GD+
Sbjct: 153 LDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVL 212
Query: 222 HRGV-GDLAKG 231
RG G+L G
Sbjct: 213 LRGENGELRFG 223
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 136 FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLL-LNFEDRNGKPWRFRYSYWNS 194
F K++TPSD +P+ A+ FPL + + + L D +G W FR+ Y +
Sbjct: 119 FAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGT 178
Query: 195 SQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGD 227
+ +++T GWS+FV KKL AGD V F R D
Sbjct: 179 PRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSAD 211
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 145 (56.1 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 87 AELEDVSNEEETAAPTKEQAIIMQETKDIIEEGEAEEDRVLISLEKEHMFDKVVTPSDVG 146
++ E N+E P E + + + + E RV+ L KE +T SDVG
Sbjct: 256 SDTESEKNDELDQTPASEPSSMSHNSANSTIRFNCREYRVI--LRKE------LTNSDVG 307
Query: 147 KLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFED-RNGKPWRFRYSYW--NSSQSYVMTKG 203
+ R+V+PK+ AE + P + +G++L +D + W F+Y +W N S+ YV+ +
Sbjct: 308 NIGRIVMPKRDAEAHLP--ALHQREGVMLKMDDFKLETTWNFKYRFWPNNKSRMYVL-ES 364
Query: 204 WSRFVKDKKLDAGDVVSFHR 223
FVK L GD+ ++
Sbjct: 365 TGGFVKQHVLQTGDIFIIYK 384
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 44/132 (33%), Positives = 62/132 (46%)
Query: 91 DVSNEEETAAPTKEQAIIMQETKDIIEEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNR 150
DV +E A T Q + QE KD E + S + + F K +T SD
Sbjct: 89 DVETDEVYAQMTL-QPLNAQEQKDPYLPAELG----VPSRQPTNYFCKTLTASDTSTHGG 143
Query: 151 LVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVK 209
+P++ AEK FP LD S L D + W+FR+ + + +++T GWS FV
Sbjct: 144 FSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVS 203
Query: 210 DKKLDAGDVVSF 221
K+L AGD V F
Sbjct: 204 AKRLVAGDSVLF 215
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 135 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW-- 192
+ K + SDV +L R+V+PK+ AE Y P+ +S + K L + +N + W F+Y YW
Sbjct: 180 ILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCMHDLQNAQLWTFKYRYWPN 239
Query: 193 NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHR 223
N S+ YV+ + +V+ L GD + ++
Sbjct: 240 NKSRMYVL-ENTGDYVRTHDLQLGDSIVIYK 269
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 136 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNS 194
F K++T SD + ++HA + P LD + L D +G WRF++ +
Sbjct: 145 FVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQ 204
Query: 195 SQSYVMTKGWSRFVKDKKLDAGDVVSFHRG-VGDLAKG 231
+ +++T GWS FV K+L AGD F RG GDL G
Sbjct: 205 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVG 242
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/89 (38%), Positives = 46/89 (51%)
Query: 136 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNS 194
F K +T SD +P++ AEK FP LD S+ L D + W FR+ Y
Sbjct: 158 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQ 217
Query: 195 SQSYVMTKGWSRFVKDKKLDAGDVVSFHR 223
+ +++T GWS FV K+L AGD V F R
Sbjct: 218 PKRHLLTTGWSLFVGSKRLRAGDSVLFIR 246
>TAIR|locus:2032170 [details] [associations]
symbol:LEC2 "LEAFY COTYLEDON 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0010344 "seed
oilbody biogenesis" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010601 "positive regulation of auxin
biosynthetic process" evidence=IMP] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010262 GO:GO:0010431 EMBL:AC021044
EMBL:AF400123 EMBL:AF400124 EMBL:AJ630496 EMBL:AY568668
EMBL:DQ446296 EMBL:DQ652865 IPI:IPI00516936 PIR:C86409
RefSeq:NP_564304.1 UniGene:At.26290 ProteinModelPortal:Q1PFR7
SMR:Q1PFR7 STRING:Q1PFR7 EnsemblPlants:AT1G28300.1 GeneID:839724
KEGG:ath:AT1G28300 TAIR:At1g28300 eggNOG:NOG295110
HOGENOM:HOG000113311 OMA:NEGRENE PhylomeDB:Q1PFR7
ProtClustDB:CLSN2688053 Genevestigator:Q1PFR7 GO:GO:0010601
GO:GO:0010344 Uniprot:Q1PFR7
Length = 363
Score = 134 (52.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 109 MQETKDIIEEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS 168
+ + KD ++ + ++ + EKE + SDVG L R+V+PK+ AE P S
Sbjct: 150 ISDKKDSYQQSTFDNKKLRVLCEKE------LKNSDVGSLGRIVLPKRDAEANLP--KLS 201
Query: 169 NEKGLLLNFEDR-NGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVVSFH 222
+++G+++ D + + W F+Y +W N S+ YV+ + FVK + GD ++ +
Sbjct: 202 DKEGIVVQMRDVFSMQSWSFKYKFWSNNKSRMYVL-ENTGEFVKQNGAEIGDFLTIY 257
>TAIR|locus:2088439 [details] [associations]
symbol:FUS3 "FUSCA 3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0010116 "positive regulation of abscisic acid
biosynthetic process" evidence=IMP] [GO:0010373 "negative
regulation of gibberellin biosynthetic process" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0003677 GO:GO:0008284 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB016889 GO:GO:0010262 GO:GO:0010116 EMBL:AF016264
EMBL:AF016265 EMBL:AJ630497 EMBL:AY568669 IPI:IPI00540441
RefSeq:NP_566799.1 UniGene:At.6029 UniGene:At.66989 HSSP:Q9ZWM9
ProteinModelPortal:Q9LW31 SMR:Q9LW31 STRING:Q9LW31
EnsemblPlants:AT3G26790.1 GeneID:822293 KEGG:ath:AT3G26790
TAIR:At3g26790 eggNOG:NOG309510 HOGENOM:HOG000112670
InParanoid:O82411 OMA:GDFVNAH PhylomeDB:Q9LW31
ProtClustDB:CLSN2713723 Genevestigator:Q9LW31 GO:GO:0010373
Uniprot:Q9LW31
Length = 313
Score = 131 (51.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 135 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNG-KPWRFRYSYW- 192
+F K + SDV L R+++PK+ AE + P + ++G+ + ED +G W F+Y YW
Sbjct: 91 LFQKELKNSDVSSLRRMILPKKAAEAHLP--ALECKEGIPIRMEDLDGFHVWTFKYRYWP 148
Query: 193 -NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHR 223
N+S+ YV+ + FV L GD + ++
Sbjct: 149 NNNSRMYVL-ENTGDFVNAHGLQLGDFIMVYQ 179
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 141 (54.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 40/137 (29%), Positives = 60/137 (43%)
Query: 89 LEDVSNEEETAAPTKEQAIIMQETKDIIEEGEAEEDRVL-ISLEKEHMFDKVVTPSDVGK 147
L V+ +T + +Q E D L ++ + F K +T SD
Sbjct: 78 LHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTST 137
Query: 148 LNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSR 206
+P++ AEK FP LD S + +D + W FR+ Y + +++T GWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSV 197
Query: 207 FVKDKKLDAGDVVSFHR 223
FV K+L AGD V F R
Sbjct: 198 FVSTKRLFAGDSVLFVR 214
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 264 NPLLMMRPPVLPASMYSQSQINNNFYNRNSISL 296
NPL P LP+++ S + NNF + + L
Sbjct: 426 NPLSGSATPQLPSAL-SSFNLPNNFASNDPSKL 457
Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 269 MRPPVLPASMYSQSQINN 286
M+PP + S Q Q++N
Sbjct: 710 MQPPQIQVSPQQQGQMSN 727
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 140 (54.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 34/100 (34%), Positives = 50/100 (50%)
Query: 134 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYW 192
H F K +T SD + ++HA++ P LD S L +D + WRFR+ +
Sbjct: 162 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFR 221
Query: 193 NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGV-GDLAKG 231
+ +++ GWS FV K+L AGD F RG G+L G
Sbjct: 222 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVG 261
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/40 (22%), Positives = 21/40 (52%)
Query: 277 SMYSQSQINNNFYNRNSISLGGTGNNNNVLSTRTLGSILY 316
+M Q + ++ + +S+ LG + +ST T+ ++ Y
Sbjct: 265 AMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYY 304
>TAIR|locus:2093166 [details] [associations]
symbol:ABI3 "AT3G24650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IEP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0031930 "mitochondria-nucleus signaling
pathway" evidence=IDA] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA] [GO:0016114 "terpenoid
biosynthetic process" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005829 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:X68141
EMBL:AJ002473 EMBL:AP000740 EMBL:AK220739 EMBL:AK220879
EMBL:AB253328 EMBL:EF597723 EMBL:EF597724 EMBL:EF597725
EMBL:EF597726 EMBL:EF597727 EMBL:EF597728 EMBL:EF597729
EMBL:EF597730 EMBL:EF597731 EMBL:EF597732 EMBL:EF597733
EMBL:EF597734 EMBL:EF597735 EMBL:EF597736 EMBL:EF597737
EMBL:EF597738 EMBL:EF597739 EMBL:EF597740 EMBL:EF597741
EMBL:EF597743 EMBL:EF597744 IPI:IPI00527803 PIR:JQ1676
RefSeq:NP_189108.1 UniGene:At.19959 ProteinModelPortal:Q01593
SMR:Q01593 IntAct:Q01593 STRING:Q01593 EnsemblPlants:AT3G24650.1
GeneID:822061 KEGG:ath:AT3G24650 TAIR:At3g24650 eggNOG:NOG318581
InParanoid:Q01593 OMA:VWNMRYR PhylomeDB:Q01593
ProtClustDB:CLSN2684517 Genevestigator:Q01593 GermOnline:AT3G24650
GO:GO:0009790 GO:GO:0031930 GO:GO:0009657 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Uniprot:Q01593
Length = 720
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 135 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFED-RNGKPWRFRYSYW- 192
+ KV+ SDVG L R+V+PK+ AE + P + + + G+ L ED + W RY +W
Sbjct: 571 LLQKVLKQSDVGNLGRIVLPKKEAETHLP-ELEARD-GISLAMEDIGTSRVWNMRYRFWP 628
Query: 193 -NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGV 225
N S+ Y++ + FVK L GD + + V
Sbjct: 629 NNKSRMYLL-ENTGDFVKTNGLQEGDFIVIYSDV 661
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 140 (54.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 45/146 (30%), Positives = 68/146 (46%)
Query: 91 DVSNEEETAAPTKEQAIIMQETKDIIEEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNR 150
DV +E A T Q + +E K+ E + S + + F K +T SD
Sbjct: 86 DVETDEVYAQMTL-QPLTPEEQKETFVPIELG----IPSKQPSNYFCKTLTASDTSTHGG 140
Query: 151 LVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVK 209
+P++ AEK FP LD + L D + W+FR+ + + +++T GWS FV
Sbjct: 141 FSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVS 200
Query: 210 DKKLDAGDVVSFHRGVGDLAKGRLFI 235
K+L AGD V F R K +LF+
Sbjct: 201 AKRLVAGDSVIFIRN----EKNQLFL 222
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 278 MYSQSQINNNFYNRNSISLGGTGNNNNVLSTRTLGSILYLRSQL 321
++ QIN++ +N + + +G+ L S LR +L
Sbjct: 692 LHGAGQINSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREEL 735
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 137 (53.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 40/137 (29%), Positives = 59/137 (43%)
Query: 92 VSNEEETAAPTKEQAIIMQETKDIIEEGE-AEEDRVLISLEK--EHMFDKVVTPSDVGKL 148
V N + A P ++ +++ E D + EK H F K +T SD
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTH 136
Query: 149 NRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRF 207
+ ++HA+ P LD S L D + W FR+ + + +++T GWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 208 VKDKKLDAGDVVSFHRG 224
V KKL AGD F RG
Sbjct: 197 VSSKKLVAGDAFIFLRG 213
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 343 MTKWQQHPIVFDSVPVVQGKATAKRLRLFGVNMDCPIT 380
++ W+ P+V +S P Q + + R + P T
Sbjct: 347 VSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPAT 384
>UNIPROTKB|P37398 [details] [associations]
symbol:VP1 "B3 domain-containing protein VP1" species:39947
"Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009790 "embryo development"
evidence=IEP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0009737 GO:GO:0005634 GO:GO:0009738
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG318581
OMA:VWNMRYR ProtClustDB:CLSN2684517 GO:GO:0009790
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AP008207 EMBL:D16640 EMBL:AP003436 EMBL:AK073805 EMBL:AK105441
RefSeq:NP_001045162.2 UniGene:Os.7360 ProteinModelPortal:P37398
STRING:P37398 PRIDE:P37398 EnsemblPlants:LOC_Os01g68370.1
GeneID:4324314 KEGG:osa:4324314 Gramene:P37398 HOGENOM:HOG000238595
Uniprot:P37398
Length = 727
Score = 128 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 103 KEQAIIMQETKDIIEEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYF 162
K QA + + +E+ + + KV+ SDVG L R+V+PK+ AE +
Sbjct: 504 KPQAAATAGAESLQRSTASEKRQAKTDKNLRFLLQKVLKQSDVGSLGRIVLPKE-AEVHL 562
Query: 163 PLDSSSNEKGLLLNFED-RNGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVV 219
P G+ + ED + W RY +W N S+ Y++ + FV+ +L GD +
Sbjct: 563 P--ELKTRDGVSIPMEDIGTSQVWNMRYRFWPNNKSRMYLL-ENTGDFVRSNELQEGDFI 619
Query: 220 SFHRGVGDLAKGRLFI 235
+ D+ G+ I
Sbjct: 620 VIY---SDIKSGKYLI 632
>TAIR|locus:2057579 [details] [associations]
symbol:AT2G33720 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U78721 EMBL:AY144103 EMBL:AY924757
IPI:IPI00543003 PIR:G84748 RefSeq:NP_180928.1 UniGene:At.37893
UniGene:At.68923 ProteinModelPortal:O23659 SMR:O23659 PRIDE:O23659
EnsemblPlants:AT2G33720.1 GeneID:817937 KEGG:ath:AT2G33720
TAIR:At2g33720 eggNOG:NOG241999 HOGENOM:HOG000155171
InParanoid:O23659 OMA:HILRYLP PhylomeDB:O23659
ProtClustDB:CLSN2913110 Genevestigator:O23659 Uniprot:O23659
Length = 326
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 36/138 (26%), Positives = 58/138 (42%)
Query: 101 PTKEQAIIMQETKDIIEEGEAEEDRVLISLEKEHM-------FDKVVTPSDVGKLNRLVI 153
PT E+AI + + + + EE++ +S E + +T S +G L RLV+
Sbjct: 161 PTSEEAINLAWMRTMSKRARKEEEKYYVSTELTLLTVADPWTLKMAMTKSSIGNLYRLVL 220
Query: 154 PKQ----HAEKYFPLDSS---SNEKGLLLNFEDRN-GKPWRFRYSYWNSSQSYVMTKGWS 205
H +Y PLD + GL + D + W S S+V+ GW
Sbjct: 221 KASFVDIHILRYLPLDDQMMVKEDSGLAVEVYDHDTDSVHNLALKKWAKSSSFVLVSGWR 280
Query: 206 R-FVKDKKLDAGDVVSFH 222
+ FV + L GDV+ +
Sbjct: 281 KCFVDRRGLQVGDVIGMY 298
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 440 352 0.00078 117 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 615 (65 KB)
Total size of DFA: 247 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.55u 0.10s 30.65t Elapsed: 00:00:01
Total cpu time: 30.55u 0.10s 30.65t Elapsed: 00:00:01
Start: Sat May 11 03:59:41 2013 End: Sat May 11 03:59:42 2013