Your job contains 1 sequence.
>013567
MESLAAAAVPLKAKLGVCHQLCFSPFNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSA
ARKRDKKISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGA
LVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAE
HAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIE
GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK
FFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCM
LDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQ
GSFLRNVSLPNQEENILEEF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013567
(440 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2207445 - symbol:RECA1 "homolog of bacterial R... 1520 6.3e-156 1
TIGR_CMR|CHY_1166 - symbol:CHY_1166 "recA protein" specie... 910 2.7e-91 1
UNIPROTKB|P0A5U4 - symbol:recA "Protein RecA" species:177... 710 1.0e-86 2
UNIPROTKB|P16971 - symbol:recA "Protein RecA" species:224... 863 2.6e-86 1
TIGR_CMR|BA_3915 - symbol:BA_3915 "recA protein, group I ... 863 2.6e-86 1
UNIPROTKB|P0A7G6 - symbol:recA species:83333 "Escherichia... 858 8.9e-86 1
TIGR_CMR|SPO_2034 - symbol:SPO_2034 "recA protein" specie... 856 1.4e-85 1
TIGR_CMR|SO_3430 - symbol:SO_3430 "recA protein" species:... 855 1.8e-85 1
TIGR_CMR|GSU_0145 - symbol:GSU_0145 "recA protein" specie... 850 6.2e-85 1
TIGR_CMR|CJE_1845 - symbol:CJE_1845 "recA protein" specie... 846 1.7e-84 1
UNIPROTKB|P45383 - symbol:recA "Protein RecA" species:243... 844 2.7e-84 1
TIGR_CMR|ECH_1109 - symbol:ECH_1109 "recA protein" specie... 844 2.7e-84 1
TIGR_CMR|VC_0543 - symbol:VC_0543 "recA protein" species:... 844 2.7e-84 1
TIGR_CMR|APH_1354 - symbol:APH_1354 "recA protein" specie... 842 4.4e-84 1
TIGR_CMR|NSE_0530 - symbol:NSE_0530 "recA protein" specie... 839 9.1e-84 1
TIGR_CMR|CBU_1054 - symbol:CBU_1054 "recA protein" specie... 822 5.8e-82 1
DICTYBASE|DDB_G0276073 - symbol:recA "recombinase A" spec... 819 1.2e-81 1
TIGR_CMR|DET_1606 - symbol:DET_1606 "recA protein" specie... 755 7.3e-75 1
TAIR|locus:2050439 - symbol:RECA2 "A. thaliana recA homol... 711 3.3e-70 1
UNIPROTKB|P78014 - symbol:recA "Protein RecA" species:272... 534 1.9e-51 1
TAIR|locus:2100038 - symbol:RECA3 "RECA homolog 3" specie... 506 1.8e-48 1
TAIR|locus:2103131 - symbol:AT3G32920 species:3702 "Arabi... 435 5.9e-41 1
DICTYBASE|DDB_G0274901 - symbol:DDB_G0274901 species:4468... 142 1.1e-06 1
FB|FBgn0003479 - symbol:spn-A "spindle A" species:7227 "D... 123 8.3e-05 1
TAIR|locus:2084558 - symbol:DMC1 "DISRUPTION OF MEIOTIC C... 119 0.00024 1
UNIPROTKB|Q881T9 - symbol:PSPTO_2793 "Uncharacterized pro... 109 0.00093 1
>TAIR|locus:2207445 [details] [associations]
symbol:RECA1 "homolog of bacterial RecA" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0009432 "SOS
response" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 EMBL:CP002684 GO:GO:0005524
GO:GO:0009570 GO:GO:0006281 GO:GO:0006974 UniGene:At.23809
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:AC002986 UniGene:At.317 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:L15229 EMBL:AY050885
EMBL:AY113960 EMBL:M98039 IPI:IPI00533410 PIR:A46259 PIR:T01050
RefSeq:NP_565198.1 ProteinModelPortal:Q39199 SMR:Q39199
STRING:Q39199 PaxDb:Q39199 PRIDE:Q39199 EnsemblPlants:AT1G79050.1
GeneID:844246 KEGG:ath:AT1G79050 GeneFarm:2669 TAIR:At1g79050
InParanoid:Q39199 OMA:KIREQVA PhylomeDB:Q39199
Genevestigator:Q39199 GermOnline:AT1G79050 Uniprot:Q39199
Length = 439
Score = 1520 (540.1 bits), Expect = 6.3e-156, P = 6.3e-156
Identities = 309/410 (75%), Positives = 341/410 (83%)
Query: 38 SSSP-LHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGDSRFLDRQRALD 96
S SP L S SR + + AA+K KIS EFD ++NG S DSRFLDRQ+AL+
Sbjct: 29 SFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDRQKALE 88
Query: 97 AAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGK 156
AAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLDLALGGGLPKGR+VEI+GPESSGK
Sbjct: 89 AAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPKGRVVEIYGPESSGK 148
Query: 157 TTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRM 216
TTLALHAIAEVQKLGGNAMLVDAEHAFDP+YSKALGVDVENLIVCQPDNGEMALE ADRM
Sbjct: 149 TTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALETADRM 208
Query: 217 CRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFL 276
CRSGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFL
Sbjct: 209 CRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFL 268
Query: 277 NQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXXXXXXXXXX 336
NQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRS GKIKS
Sbjct: 269 NQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIGLRARVRVQKSK 328
Query: 337 XXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLR 396
PYKQAEFEI+FGEGVSKLGC+LDCAE+M++VV+KG+WYSY DQRLGQGR+KALQ+LR
Sbjct: 329 VSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQRLGQGREKALQHLR 388
Query: 397 DNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPN------QEENILEEF 440
+NP LQ+EIEK VR +M DG VH+ + L + S + +EE+ L++F
Sbjct: 389 ENPALQDEIEKKVRLLMLDGEVHRSTPLMSSSSSSASHREEEEEDSLDDF 438
>TIGR_CMR|CHY_1166 [details] [associations]
symbol:CHY_1166 "recA protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003684 GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:TRKGAWY RefSeq:YP_360011.1
ProteinModelPortal:Q3ACX3 SMR:Q3ACX3 STRING:Q3ACX3 GeneID:3727219
KEGG:chy:CHY_1166 PATRIC:21275472
BioCyc:CHYD246194:GJCN-1165-MONOMER Uniprot:Q3ACX3
Length = 343
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 182/336 (54%), Positives = 237/336 (70%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +AL+ ++ I FGKGS+ RLG G VE P+G L LDLALG GG+P+GR+VE
Sbjct: 3 DKLKALELTISQIEKQFGKGSIMRLGENTGKFQVEVIPTGSLALDLALGVGGVPRGRVVE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTT+ALH IAE QK+GG A +DAEHA DP Y++ LGVD+ENL+V QPD GE
Sbjct: 63 IFGPESSGKTTVALHIIAEAQKMGGIAAFIDAEHALDPVYAQKLGVDIENLLVSQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 123 QALEIAESLVRSGAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAIS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXX 327
K+ IF+NQ+R K+GV +GNPE T GG ALKF+AS+R+++R IK
Sbjct: 183 KSKTVAIFINQMREKVGVMFGNPETTPGGRALKFYASIRMDVRKIDVIKQGNDIIGSRTR 242
Query: 328 XXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
P+KQA+F+I++GEG+SK G +LD A + IV + G+WYSY D+RLGQG
Sbjct: 243 VKIVKNKVAP--PFKQADFDIMYGEGISKEGSLLDVAVELKIVQKVGSWYSYNDERLGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSF 423
R+ A ++LR NP + EIE+ +R + + S SF
Sbjct: 301 RENAKEFLRQNPEIYREIEQKIREQVLN-SPESSSF 335
>UNIPROTKB|P0A5U4 [details] [associations]
symbol:recA "Protein RecA" species:1773 "Mycobacterium
tuberculosis" [GO:0000150 "recombinase activity" evidence=IDA]
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0000725
"recombinational repair" evidence=IMP] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0004520 "endodeoxyribonuclease
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI;IEP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0009650 "UV protection" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0030145 "manganese
ion binding" evidence=IDA] [GO:0042148 "strand invasion"
evidence=IDA] [GO:0046677 "response to antibiotic" evidence=IEP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR004042
InterPro:IPR006141 InterPro:IPR006142 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PRINTS:PR00379 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 PROSITE:PS50817 PROSITE:PS50818
PROSITE:PS50819 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842580 GO:GO:0000287 GO:GO:0046677 GO:GO:0030145
GO:GO:0003697 GO:GO:0006314 GO:GO:0004520 GO:GO:0009650
GO:GO:0008094 GO:GO:0009432 GO:GO:0000725 InterPro:IPR003586
InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
GO:GO:0000150 TIGRFAMs:TIGR01443 TIGRFAMs:TIGR01445 GO:GO:0042148
KO:K03553 Gene3D:3.30.250.10 InterPro:IPR023400
PANTHER:PTHR22942:SF1 SUPFAM:SSF54752 TIGRFAMs:TIGR02012
EMBL:X58485 EMBL:AJ000012 EMBL:AJ000011 PIR:S18206
RefSeq:NP_217253.1 RefSeq:NP_337313.1 RefSeq:YP_006516181.1
PDB:1G18 PDB:1G19 PDB:1MO3 PDB:1MO4 PDB:1MO5 PDB:1MO6 PDB:2IMZ
PDB:2IN0 PDB:2IN8 PDB:2IN9 PDB:2L8L PDB:3IFJ PDB:3IGD PDBsum:1G18
PDBsum:1G19 PDBsum:1MO3 PDBsum:1MO4 PDBsum:1MO5 PDBsum:1MO6
PDBsum:2IMZ PDBsum:2IN0 PDBsum:2IN8 PDBsum:2IN9 PDBsum:2L8L
PDBsum:3IFJ PDBsum:3IGD ProteinModelPortal:P0A5U4 SMR:P0A5U4
MEROPS:N10.009 PRIDE:P0A5U4 EnsemblBacteria:EBMYCT00000000048
EnsemblBacteria:EBMYCT00000072309 GeneID:13319464 GeneID:888371
GeneID:925483 KEGG:mtc:MT2806 KEGG:mtu:Rv2737c KEGG:mtv:RVBD_2737c
PATRIC:18127918 TubercuList:Rv2737c eggNOG:COG1372
ProtClustDB:PRK09519 BindingDB:P0A5U4 ChEMBL:CHEMBL1741171
EvolutionaryTrace:P0A5U4 Uniprot:P0A5U4
Length = 790
Score = 710 (255.0 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 134/228 (58%), Positives = 176/228 (77%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+ A+ I S+GKGSV RLG + P+G + LD+ALG GGLP+GR++EI
Sbjct: 6 DREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q GG A +DAEHA DP Y+K LGVD ++L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAE+EGE+G +GLQARLMSQALRKM+G +
Sbjct: 126 ALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIK 316
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR+++R +K
Sbjct: 186 SGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLK 233
Score = 176 (67.0 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 29/79 (36%), Positives = 55/79 (69%)
Query: 340 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNP 399
P+KQAEF+I++G+G+S+ G ++D ++ + GAW++Y ++LGQG++ A +L +N
Sbjct: 695 PFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENA 754
Query: 400 LLQEEIEKVVRSMMSDGSV 418
+ +EIEK ++ + G+V
Sbjct: 755 DVADEIEKKIKEKLGIGAV 773
>UNIPROTKB|P16971 [details] [associations]
symbol:recA "Protein RecA" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 EMBL:AL009126
GenomeReviews:AL009126_GR GO:GO:0009295 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 EMBL:X52132 EMBL:U87792
EMBL:U56238 PIR:S10370 RefSeq:NP_389576.2 ProteinModelPortal:P16971
SMR:P16971 IntAct:P16971 EnsemblBacteria:EBBACT00000002648
GeneID:939497 KEGG:bsu:BSU16940 PATRIC:18975195 GenoList:BSU16940
BioCyc:BSUB:BSU16940-MONOMER Uniprot:P16971
Length = 348
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 171/335 (51%), Positives = 233/335 (69%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ ALD A+ I FGKGS+ +LG + T PSG L LD ALG GG P+GRI+E+
Sbjct: 3 DRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALGIGGYPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y++ LGV++E L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEG++G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXX 328
+ IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKTKI 242
Query: 329 XXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
P++ AE +I++GEG+SK G ++D +DIV + G+WYSY ++RLGQGR
Sbjct: 243 KVVKNKVAP--PFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRS---MMSDGSVHQ 420
+ A Q+L++N + I++ +R + ++G V Q
Sbjct: 301 ENAKQFLKENKDIMLMIQEQIREHYGLDNNGVVQQ 335
>TIGR_CMR|BA_3915 [details] [associations]
symbol:BA_3915 "recA protein, group I intron-containing"
species:198094 "Bacillus anthracis str. Ames" [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AF229167 RefSeq:NP_846162.1
RefSeq:YP_029881.1 ProteinModelPortal:Q9APZ2 SMR:Q9APZ2
IntAct:Q9APZ2 EnsemblBacteria:EBBACT00000011833
EnsemblBacteria:EBBACT00000023909 EnsemblBacteria:EBBACT00000082851
GeneID:1087627 GeneID:2850041 KEGG:ban:BA_3915 KEGG:bat:BAS3629
PATRIC:18785420 ProtClustDB:PRK09354 Uniprot:Q9APZ2
Length = 343
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 169/322 (52%), Positives = 228/322 (70%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ ALD A+ I FGKGS+ +LG V T SG L LD+ALG GG P+GRI+EI
Sbjct: 3 DRQAALDMALKQIEKQFGKGSIMKLGEQAERKVSTVSSGSLALDVALGVGGYPRGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHAIAEVQ+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK+SG +K
Sbjct: 123 GLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXX 328
+ IF+NQIR K+GV +GNPE T GG ALKF+++VRLE+R ++K
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKV 242
Query: 329 XXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
P++ AE +I++GEG+S+ G +LD A +DIV + GAWYSY ++RLGQGR
Sbjct: 243 KVVKNKVAP--PFRVAEVDIMYGEGISREGEILDMASELDIVQKSGAWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ + Q+L++N L+EEI +R
Sbjct: 301 ENSKQFLKENTDLREEIAFFIR 322
>UNIPROTKB|P0A7G6 [details] [associations]
symbol:recA species:83333 "Escherichia coli K-12"
[GO:0003697 "single-stranded DNA binding" evidence=IEA;IDA]
[GO:0048870 "cell motility" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA;IEP] [GO:0009432 "SOS response"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006281 GO:GO:0006974 GO:GO:0006310
GO:GO:0003697 GO:GO:0048870 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:V00328 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:G65049 RefSeq:NP_417179.1 RefSeq:YP_490908.1 PDB:1AA3 PDB:1N03
PDB:1REA PDB:1U94 PDB:1U98 PDB:1U99 PDB:1XMS PDB:1XMV PDB:2REB
PDB:2REC PDB:3CMT PDB:3CMU PDB:3CMV PDB:3CMW PDB:3CMX PDBsum:1AA3
PDBsum:1N03 PDBsum:1REA PDBsum:1U94 PDBsum:1U98 PDBsum:1U99
PDBsum:1XMS PDBsum:1XMV PDBsum:2REB PDBsum:2REC PDBsum:3CMT
PDBsum:3CMU PDBsum:3CMV PDBsum:3CMW PDBsum:3CMX
ProteinModelPortal:P0A7G6 SMR:P0A7G6 DIP:DIP-31832N IntAct:P0A7G6
MINT:MINT-1300726 SWISS-2DPAGE:P0A7G6 PaxDb:P0A7G6 PRIDE:P0A7G6
EnsemblBacteria:EBESCT00000004487 EnsemblBacteria:EBESCT00000004488
EnsemblBacteria:EBESCT00000017937 GeneID:12930224 GeneID:947170
KEGG:ecj:Y75_p2637 KEGG:eco:b2699 PATRIC:32120796 EchoBASE:EB0816
EcoGene:EG10823 BioCyc:EcoCyc:EG10823-MONOMER
BioCyc:ECOL316407:JW2669-MONOMER ChEMBL:CHEMBL3434
EvolutionaryTrace:P0A7G6 Genevestigator:P0A7G6 Uniprot:P0A7G6
Length = 353
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 170/325 (52%), Positives = 224/325 (68%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q+AL AA+ I FGKGS+ RLG VET +G L+LD+ALG GGLP GRIVEI
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IA Q+ G +DAEHA DP Y++ LGVD++NL+ QPD GE
Sbjct: 66 YGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D+I VDSV+ALTP+AEIEGEIG +GL AR+MSQA+RK++GN +
Sbjct: 126 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXX 328
+ LIF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G +K
Sbjct: 186 SNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSETRV 245
Query: 329 XXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
P+KQAEF+I++GEG++ G ++D ++ + GAWYSY +++GQG+
Sbjct: 246 KVVKNKIAA--PFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
A +L+DNP +EIEK VR ++
Sbjct: 304 ANATAWLKDNPETAKEIEKKVRELL 328
>TIGR_CMR|SPO_2034 [details] [associations]
symbol:SPO_2034 "recA protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003677 "DNA binding" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 OMA:KAFFREH Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_167265.1
ProteinModelPortal:Q5LRU0 SMR:Q5LRU0 PRIDE:Q5LRU0 GeneID:3193665
KEGG:sil:SPO2034 PATRIC:23377403 Uniprot:Q5LRU0
Length = 347
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 167/324 (51%), Positives = 227/324 (70%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+Q+ALD+A+ I FGKGS+ RLG +E +G L LD+ALG GGLP GRIVE
Sbjct: 8 DKQKALDSALAQIERQFGKGSIMRLGGENAIQEIEASSTGSLGLDIALGIGGLPMGRIVE 67
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LH IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD GE
Sbjct: 68 IYGPESSGKTTLTLHCIAEQQKRGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGE 127
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA++++ VDSV+ALTP++E+EG++G +G+ ARLMSQA+RK++G+ S
Sbjct: 128 QALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSIS 187
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXX 327
++ C +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK
Sbjct: 188 RSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKDRDEVVGNATR 247
Query: 328 XXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
P+KQ EF+I++GEG+SK G +LD +V + G+W+SYGD+R+GQG
Sbjct: 248 VKVVKNKVAP--PFKQVEFDIMYGEGISKTGELLDLGVKAGVVDKSGSWFSYGDERIGQG 305
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A +LR+N + IE +R+
Sbjct: 306 RENAKTFLRENQSIALAIEDKIRA 329
>TIGR_CMR|SO_3430 [details] [associations]
symbol:SO_3430 "recA protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
RefSeq:NP_718983.1 ProteinModelPortal:Q8EBS0 GeneID:1171105
KEGG:son:SO_3430 PATRIC:23526548 Uniprot:Q8EBS0
Length = 357
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 168/325 (51%), Positives = 225/325 (69%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL A ++ I FGKGS+ +LG VET +G L+LD+ALG GGLP GRIVEI
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IA Q+ G +DAEHA DP Y+K LGVD++NL+ QPD GE
Sbjct: 66 YGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D+I VDSV+ALTP+AEIEGEIG +GL AR+MSQA+RK++GN +
Sbjct: 126 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXX 328
+ LIF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG IK
Sbjct: 186 SNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNETRV 245
Query: 329 XXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
P+KQAEF+I++G+G+++ G ++D ++ + GAWYSY ++GQGR
Sbjct: 246 KVVKNKVAA--PFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
A +YL +NP + EI+K +R ++
Sbjct: 304 ANAGKYLTENPAIAAEIDKTLRELL 328
>TIGR_CMR|GSU_0145 [details] [associations]
symbol:GSU_0145 "recA protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:NP_951207.1 ProteinModelPortal:P62215 SMR:P62215
GeneID:2688015 KEGG:gsu:GSU0145 PATRIC:22023038
BioCyc:GSUL243231:GH27-171-MONOMER Uniprot:P62215
Length = 338
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 171/320 (53%), Positives = 227/320 (70%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL--VETFPSGCLTLDLALG-GGLPKGRIV 146
+R++A++ A++ I FGKG++ RLG A AL V P+G L+LDLALG GG+P+GRI+
Sbjct: 4 EREKAIELALSQIEKQFGKGAIMRLG-ADEALPDVAAIPTGSLSLDLALGVGGVPRGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH AE QK+GG A VDAEHA D Y++ LGV ++L+V QPD G
Sbjct: 63 EIYGPESSGKTTLALHIAAEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGA+D++ +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 123 EQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTGII 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXX 326
SK+ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR +K
Sbjct: 183 SKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRKIASLKQGQDVIGSRT 242
Query: 327 XXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
P+K+ EF+I +GEG+S+ G +LD A IV + GAW+SYG R+GQ
Sbjct: 243 KVKVVKNKVAP--PFKEVEFDIYYGEGISREGDILDLAVEKGIVDKSGAWFSYGGDRIGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ + +L++ P L EIE
Sbjct: 301 GRENSRLFLKERPELVNEIE 320
>TIGR_CMR|CJE_1845 [details] [associations]
symbol:CJE_1845 "recA protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_179815.1
ProteinModelPortal:Q5HSC0 SMR:Q5HSC0 STRING:Q5HSC0 GeneID:3232472
KEGG:cjr:CJE1845 PATRIC:20045522 OMA:TRKGAWY
BioCyc:CJEJ195099:GJC0-1884-MONOMER Uniprot:Q5HSC0
Length = 343
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 168/335 (50%), Positives = 234/335 (69%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+++++LDAA+ ++ +FGKG++ RLG +++ +G + LDLALG GG+PKGRI+EI
Sbjct: 4 NKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSVGLDLALGIGGVPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LH IAE QK GG +DAEHA D Y+K LGV+ ++L V QPD GE
Sbjct: 64 YGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKYAKNLGVNTDDLYVSQPDFGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+DLI VDSV+ALTP+AEIEG++G Q +GLQARLMSQALRK++G K
Sbjct: 124 ALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGDQHVGLQARLMSQALRKLTGIVHK 183
Query: 269 AGCTLIFLNQIRYKIGVY-YGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXX 327
T+IF+NQIR KIG YG PE T+GG ALKF+ASVRL++R +K
Sbjct: 184 MNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFYASVRLDVRKVATLKQNEEPIGNRVK 243
Query: 328 XXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
P++QAEF+++FGEG+S+ G ++D +DIV + GAW+SY D++LGQG
Sbjct: 244 VKVVKNKVAP--PFRQAEFDVMFGEGLSREGELIDYGVKLDIVDKSGAWFSYKDKKLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
R+ + +L++NP + +EI K +++ M + GS
Sbjct: 302 RENSKAFLKENPEIADEITKAIQNSMGIEGMISGS 336
>UNIPROTKB|P45383 [details] [associations]
symbol:recA "Protein RecA" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0006281 "DNA repair"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=IMP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 166/325 (51%), Positives = 224/325 (68%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q+AL AA+ I FGKGS+ RLG VET +G L+LD+ALG GGLP GRIVEI
Sbjct: 4 NKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTL L IA Q+ G +DAEHA DP Y+K LGV+++ L+V QPD GE
Sbjct: 64 FGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D+I VDSV+ALTP+AEIEGE+G +GLQAR++SQA+RK++GN +
Sbjct: 124 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXX 328
+ C IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG IK
Sbjct: 184 SNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETRI 243
Query: 329 XXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
P+K+A +I++G+G ++ G ++D +V + GAWYSY ++GQG+
Sbjct: 244 KVVKNKIAA--PFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
A +YL++NP + + ++K +R M+
Sbjct: 302 ANACKYLKENPEIAKTLDKKLREML 326
>TIGR_CMR|ECH_1109 [details] [associations]
symbol:ECH_1109 "recA protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_507893.1 ProteinModelPortal:Q2GF90 SMR:Q2GF90
STRING:Q2GF90 GeneID:3927794 KEGG:ech:ECH_1109 PATRIC:20577554
BioCyc:ECHA205920:GJNR-1112-MONOMER Uniprot:Q2GF90
Length = 357
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 178/356 (50%), Positives = 239/356 (67%)
Query: 85 DSRFL--DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
DS+ L +RQ+ALD+A++ I +FG+G++ +L +++ +G + LD ALG GG P
Sbjct: 3 DSKNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEKIDSISTGSIALDTALGIGGFP 62
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGRIVEIFGPESSGKTTLALH IAE QK GGN +DAEHA D Y++ LGV+ +LIV
Sbjct: 63 KGRIVEIFGPESSGKTTLALHVIAESQKKGGNCAFIDAEHALDIMYARKLGVNTGDLIVS 122
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPD GE AL I + + SGAID+I VDSV+ALTPRAEIEG++G Q +GLQARL+S ALRK
Sbjct: 123 QPDTGEQALHIVEYLVCSGAIDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHALRK 182
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXX 321
++ SKA C LIF+NQIR KIGV YGNPE T+GG ALKF++SVRL+IR IK
Sbjct: 183 LTSIVSKANCVLIFINQIRMKIGVVYGNPETTTGGNALKFYSSVRLDIRKVSAIKDKDVI 242
Query: 322 XXXXXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
P+KQ +F+I++ EG+SK+G ++D ++I+ + G++YSY
Sbjct: 243 IGNQTKVKVVKNKVAP--PFKQVDFDIMYNEGISKVGEIIDMGVKLNIIEKAGSYYSYNS 300
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRSMM-SDGSVHQGSFLRNVSLPNQEENI 436
RLGQG++ A YL+ N EIE+ +RS++ SD V + N +L EE +
Sbjct: 301 VRLGQGKENAKSYLKANCDTAHEIEQKIRSILASDNEVSCFNAEVNDNLHEVEETV 356
>TIGR_CMR|VC_0543 [details] [associations]
symbol:VC_0543 "recA protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 166/325 (51%), Positives = 224/325 (68%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q+AL AA+ I FGKGS+ RLG VET +G L+LD+ALG GGLP GRIVEI
Sbjct: 4 NKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTL L IA Q+ G +DAEHA DP Y+K LGV+++ L+V QPD GE
Sbjct: 64 FGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D+I VDSV+ALTP+AEIEGE+G +GLQAR++SQA+RK++GN +
Sbjct: 124 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXX 328
+ C IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG IK
Sbjct: 184 SNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETRI 243
Query: 329 XXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
P+K+A +I++G+G ++ G ++D +V + GAWYSY ++GQG+
Sbjct: 244 KVVKNKIAA--PFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
A +YL++NP + + ++K +R M+
Sbjct: 302 ANACKYLKENPEIAKTLDKKLREML 326
>TIGR_CMR|APH_1354 [details] [associations]
symbol:APH_1354 "recA protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:IRRTEWI ProtClustDB:PRK09354
RefSeq:YP_505854.1 ProteinModelPortal:Q2GIE7 SMR:Q2GIE7
STRING:Q2GIE7 GeneID:3931040 KEGG:aph:APH_1354 PATRIC:20951508
BioCyc:APHA212042:GHPM-1354-MONOMER Uniprot:Q2GIE7
Length = 354
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 174/352 (49%), Positives = 234/352 (66%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+QRA+DAA+ I +FG+GS+ RL ++ VE +G + LD ALG GGLP+GRI+EI
Sbjct: 7 DKQRAVDAAIGQIERAFGRGSIMRLQNSPVEAVECVSTGSIALDAALGVGGLPRGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTLALH IAE QK GG +DAEHA D Y++ LGV V +LIV QPD GE
Sbjct: 67 FGPESSGKTTLALHVIAEAQKNGGACAFIDAEHALDTLYARKLGVSVGDLIVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
AL I + + SGA+D+I VDSV+ALTPRAEIEG++G Q +GLQARL+S ALRK++ SK
Sbjct: 127 ALHIVEHLVNSGAVDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHALRKLTSIVSK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXX 328
A C L+F+NQIR KIGV YGNPEVT+GG ALKF+ S+RL+IR +K
Sbjct: 187 ANCLLVFINQIRMKIGVVYGNPEVTTGGSALKFYTSIRLDIRKVSALKEKENVTGHLARV 246
Query: 329 XXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
P+KQAEF+I++ EG+SK+G +LD + + G++YS+ +LGQGR
Sbjct: 247 KVVKNKVAP--PFKQAEFDIMYSEGISKVGEILDMGVRFGFIEKAGSYYSHEGIKLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEEF 440
+ A YL++N L ++E ++R+ + + F + P++E I E F
Sbjct: 305 ETARSYLKNNADLSHKLEGLIRAKLLESMRSSDVFGSDGRAPSEE--IEESF 354
>TIGR_CMR|NSE_0530 [details] [associations]
symbol:NSE_0530 "recA protein" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_506414.1 ProteinModelPortal:Q2GDN2 SMR:Q2GDN2
STRING:Q2GDN2 GeneID:3931948 KEGG:nse:NSE_0530 PATRIC:22681109
BioCyc:NSEN222891:GHFU-550-MONOMER Uniprot:Q2GDN2
Length = 327
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 166/325 (51%), Positives = 224/325 (68%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEI 148
++R+ AL + I FGKGS+ S A VE +G + LD ALGGG+PKGRI+EI
Sbjct: 1 MNREDALKGVVVQIEKMFGKGSIMTF-SQEPASVECISTGSIGLDSALGGGIPKGRIIEI 59
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTL LH IAE QK GG +DAEHA DP Y++ LGV +E L++ QPD GE
Sbjct: 60 FGPESSGKTTLTLHIIAEAQKNGGTCAFIDAEHALDPVYARRLGVKIEELLISQPDTGEQ 119
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + +SGA+D+I VDSV+ALTP+AEIEGE+G +GLQARL+SQALRK++ + S+
Sbjct: 120 ALEIVDSLIKSGAVDVIVVDSVAALTPKAEIEGEMGDLHVGLQARLLSQALRKITASVSR 179
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXX 328
+ C ++F+NQIR KIGV +G+PE T+GG ALKF++SVR++IR G IK
Sbjct: 180 SNCVVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRIDIRKIGSIKDKEDVVGNQTRV 239
Query: 329 XXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
P+KQAEF+II+ EG+SKLG +++ I+ + G++YSYGD +LGQG+
Sbjct: 240 KVVKNKVAP--PFKQAEFDIIYTEGISKLGEIIEIGVRNKIIEKAGSYYSYGDVKLGQGK 297
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ Q+L++N L E+E+ VR M
Sbjct: 298 ENVKQFLKENKELAAELERKVRDSM 322
>TIGR_CMR|CBU_1054 [details] [associations]
symbol:CBU_1054 "recA protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354
RefSeq:NP_820055.1 ProteinModelPortal:Q83CQ4 SMR:Q83CQ4
PRIDE:Q83CQ4 GeneID:1208955 KEGG:cbu:CBU_1054 PATRIC:17930833
OMA:MLIFINQ BioCyc:CBUR227377:GJ7S-1046-MONOMER Uniprot:Q83CQ4
Length = 343
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 166/326 (50%), Positives = 222/326 (68%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
+R AL+AA++ I FGKGSV RLG G ++ +G L LD+ALG GGLP+GRI+E
Sbjct: 3 NRSNALNAALSQIERQFGKGSVMRLGDPGLIPDIDVISTGSLGLDIALGVGGLPRGRIIE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPE+SGKTTLAL IA Q++GG A VDAEHA D Y+ LGV VE+L+V QPD GE
Sbjct: 63 IYGPEASGKTTLALQTIASCQRMGGTAAFVDAEHALDAIYAGKLGVKVEDLLVSQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+DLI +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N
Sbjct: 123 QALEITDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXX 327
K+ +IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR G IK
Sbjct: 183 KSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKKGEEILGSETR 242
Query: 328 XXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
P++Q EF+I++G G+S+ ++D ++V + GAWYSY +R+GQG
Sbjct: 243 VKVVKNKVAP--PFRQVEFDILYGLGISRESELIDLGVKNELVEKAGAWYSYNGERIGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
++ Q+ +NP + EIE +R +
Sbjct: 301 KENVRQFFLENPKIAGEIETRLREKL 326
>DICTYBASE|DDB_G0276073 [details] [associations]
symbol:recA "recombinase A" species:44689
"Dictyostelium discoideum" [GO:0006281 "DNA repair"
evidence=IEA;IGI] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009432 "SOS response" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
dictyBase:DDB_G0276073 GO:GO:0005739 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000014 GenomeReviews:CM000151_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:BR000215 RefSeq:XP_643316.1
HSSP:P0A7G6 ProteinModelPortal:Q75JL2 SMR:Q75JL2 STRING:Q75JL2
EnsemblProtists:DDB0231571 GeneID:8620362 KEGG:ddi:DDB_G0276073
OMA:IRRTEWI Uniprot:Q75JL2
Length = 452
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 179/393 (45%), Positives = 243/393 (61%)
Query: 26 FN-MKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSG 84
FN +K +S L + + L + + SK S + K+ KK + DG++ S
Sbjct: 24 FNGLKINSFSLCNTKTNLFTNKTNINLYNNYSKSSKSGKKSKKDEDDEDGEIE----TSK 79
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
S+ +++ + ++ SFGKG++ +LGS VE PSG + LD+ALG GGLPK
Sbjct: 80 TSKKSASSSSMENVLKELEKSFGKGTLMKLGSQFSTQKVEVIPSGSMGLDIALGVGGLPK 139
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR+ EIFGPESSGKTTLALH IA+ QK GGN +DAEHA +P ++ LGV+++ L V Q
Sbjct: 140 GRVTEIFGPESSGKTTLALHVIAQAQKAGGNCTFIDAEHALNPQWAARLGVNLDELFVSQ 199
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PDNGE ALEI D + RS + +I VDSV+AL PR EIEGE+G +G+QARLMSQALRK+
Sbjct: 200 PDNGEQALEIVDSLLRSKTMSVIVVDSVAALVPRVEIEGEMGDSHLGVQARLMSQALRKL 259
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXX 322
S + C LIF+NQIR KIGV +GNPEVTSGG ALKFF+S+R++IR G +K
Sbjct: 260 SPTLKDSNCVLIFINQIRMKIGVMFGNPEVTSGGNALKFFSSIRIDIRKVGTVKKGDDII 319
Query: 323 XXXXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
P+K+A F+I F G++K G ++D A I+ + G+WYSY D
Sbjct: 320 ASQVKAKVVKNKLAP--PFKEAIFDIDFQSGINKTGEIIDLAVAEGIIDKMGSWYSYNDI 377
Query: 383 RLGQGRDKALQYL--RDNPLLQEEIEKVVRSMM 413
+L QGR+K +YL + P L EIE +R +
Sbjct: 378 KLDQGREKT-KYLLEKTQPNLLVEIENKLRDKL 409
>TIGR_CMR|DET_1606 [details] [associations]
symbol:DET_1606 "recA protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_182301.1 ProteinModelPortal:Q3Z648 SMR:Q3Z648
STRING:Q3Z648 GeneID:3229079 KEGG:det:DET1606 PATRIC:21610224
BioCyc:DETH243164:GJNF-1607-MONOMER Uniprot:Q3Z648
Length = 337
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 151/324 (46%), Positives = 213/324 (65%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAG-GALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +AL+ + I FGKGS+ +L VE P+ L LD+ALG GG+P+GRI E
Sbjct: 4 EKDKALELTVGIIEKRFGKGSIMKLSDPTFRQTVEFIPTSSLALDIALGVGGIPRGRISE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPE SGKTTLA H IA+ QK+G A +D EHA DP Y+ GV+++ L++ QPD GE
Sbjct: 64 IFGPEGSGKTTLAQHIIAQAQKMGEKAAYIDVEHALDPKYASTCGVNLDELLISQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
AL IA+ + RS AI +I +DSV+AL P+AEIEG++G +GLQARLMSQALRK++ +
Sbjct: 124 EALGIAEELVRSTAIGVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTASIG 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXX 327
+ +IF+NQ+R K+GV +GNPEVT GG ALKF++SVR+++R IK
Sbjct: 184 QTRTAVIFINQLREKVGVMFGNPEVTPGGRALKFYSSVRIDLRRIETIKQGTVAIGTRVR 243
Query: 328 XXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
P++ AEF+I+F G+S+ G ++D +++ + GA++SYGD RLGQG
Sbjct: 244 AKVVKNKVAP--PFRTAEFDIMFDSGISREGNLIDLGVTSEVIRKAGAFFSYGDIRLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL NP L +EIE+ +R+
Sbjct: 302 RESAKNYLAANPDLAQEIEEKIRA 325
>TAIR|locus:2050439 [details] [associations]
symbol:RECA2 "A. thaliana recA homolog 2" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0009432 "SOS response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006281 EMBL:AC005917
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
UniGene:At.66366 eggNOG:COG0468 EMBL:BT029745 IPI:IPI00520863
PIR:D84577 RefSeq:NP_179539.2 ProteinModelPortal:Q9ZUP2 SMR:Q9ZUP2
STRING:Q9ZUP2 PaxDb:Q9ZUP2 PRIDE:Q9ZUP2 EnsemblPlants:AT2G19490.1
GeneID:816468 KEGG:ath:AT2G19490 GeneFarm:2671 TAIR:At2g19490
HOGENOM:HOG000264120 InParanoid:Q9ZUP2 KO:K03553 OMA:KAFFREH
PhylomeDB:Q9ZUP2 ProtClustDB:CLSN2681153 Genevestigator:Q9ZUP2
GermOnline:AT2G19490 Gene3D:3.30.250.10 InterPro:IPR023400
PANTHER:PTHR22942:SF1 SUPFAM:SSF54752 TIGRFAMs:TIGR02012
Uniprot:Q9ZUP2
Length = 430
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 165/383 (43%), Positives = 234/383 (61%)
Query: 36 SISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGDSRFLDRQRAL 95
S+ SS + R S +L + KK S + DG NG SS+ G S+ ++ AL
Sbjct: 10 SLRSSLFSSELLRRSVVGTSFQLRGFAAKAKKKS-KSDG--NG-SSEEGMSK---KEIAL 62
Query: 96 DAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPES 153
A++ I SSFGKGS+ LG A V F +G LD+ALG GGLPKGR+VEI+GPE+
Sbjct: 63 QQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYGPEA 122
Query: 154 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIA 213
SGKTTLALH IAE QK GG + VDAEHA D S +KA+GV+ ENL++ QPD GE AL +
Sbjct: 123 SGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLV 182
Query: 214 DRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTL 273
D + RSG++D+I VDSV+AL P+ E+EGE+G + +QARLMSQALRK+S + S + L
Sbjct: 183 DTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLL 242
Query: 274 IFLNQIRYKIGVY--YGNP-EVTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXXXX 330
IF+NQ+R K+ + +G P EVT GG ALKF+AS+RL I+ G IK
Sbjct: 243 IFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVSVKI 302
Query: 331 XXXXXXXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
P++ A+FE+ FG+G+ K+ ++D + + + G +Y+ + G++
Sbjct: 303 VKNKLAP--PFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNY-HGKEA 359
Query: 391 ALQYLRDNPLLQEEIEKVVRSMM 413
++L+ N QEE+ K ++ +
Sbjct: 360 LKRFLKQNESDQEELMKKLQDKL 382
>UNIPROTKB|P78014 [details] [associations]
symbol:recA "Protein RecA" species:272634 "Mycoplasma
pneumoniae M129" [GO:0005515 "protein binding" evidence=IPI]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 EMBL:U00089
GenomeReviews:U00089_GR GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:S73678 RefSeq:NP_110178.1 ProteinModelPortal:P78014
IntAct:P78014 GeneID:877213 KEGG:mpn:MPN490 PATRIC:20022406
BioCyc:MPNE272634:GJ6Z-531-MONOMER Uniprot:P78014
Length = 336
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 117/288 (40%), Positives = 175/288 (60%)
Query: 122 VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 180
++T +G L LD ALG GGLP GRIVE++G ESSGKTT+ALHA+A QK G A +DAE
Sbjct: 37 IKTVSTGSLHLDEALGTGGLPLGRIVELYGNESSGKTTVALHAVASFQKAGKVACYIDAE 96
Query: 181 HAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIE 240
A D SY+KA+G+D+ L+V P +GE A + + + ++ + LI VDSV+AL P+ E+E
Sbjct: 97 GALDLSYAKAIGIDLGKLLVAHPKHGENAFALMESLIKTNKVALIVVDSVAALIPKQELE 156
Query: 241 GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 300
G + Q IGL AR+MS+ LR++ ++ L+F+NQ+R K GV +GN EVT+GG ALK
Sbjct: 157 GNMDDQTIGLHARMMSKGLRRVQSLLPESDTCLLFINQLREKPGVMFGNGEVTTGGRALK 216
Query: 301 FFASVRLEIRSTGKIKSXXXXXXXXXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCM 360
F+AS+R+E + + +K P+ A EI+F G+ +
Sbjct: 217 FYASMRMEAKRSELLKDRFGNYVGIKSKLTVSKNKVAR-PFGVAFLEIMFNRGIVYEHEV 275
Query: 361 LDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKV 408
++ A ++VVR YS+ Q + G++K L + P L E+I+++
Sbjct: 276 IELALKHNVVVRSDNAYSFKSQNIAIGKEKLFSVLAEKPELFEQIKQL 323
>TAIR|locus:2100038 [details] [associations]
symbol:RECA3 "RECA homolog 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;ISS] [GO:0009432 "SOS response" evidence=IEA;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI]
[GO:0009408 "response to heat" evidence=IGI] InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006281 GO:GO:0009408
GO:GO:0006310 GO:GO:0003697 GO:GO:0000002 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 EMBL:AC010927 UniGene:At.39982
UniGene:At.48640 HOGENOM:HOG000264120 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AY072877 EMBL:AY136400 EMBL:BT000214
IPI:IPI00542438 RefSeq:NP_187625.2 ProteinModelPortal:Q8RY99
SMR:Q8RY99 IntAct:Q8RY99 PRIDE:Q8RY99 EnsemblPlants:AT3G10140.1
GeneID:820177 KEGG:ath:AT3G10140 GeneFarm:2673 TAIR:At3g10140
InParanoid:Q8RY99 OMA:CRSETLI PhylomeDB:Q8RY99
ProtClustDB:CLSN2722126 Genevestigator:Q8RY99 GermOnline:AT3G10140
Uniprot:Q8RY99
Length = 389
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 128/378 (33%), Positives = 208/378 (55%)
Query: 48 RSRFFTASSKLSAARK-------RDKKISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMN 100
R RFF+ S+L+ R ++ +S + D + ++ AL A++
Sbjct: 12 RFRFFSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALS 71
Query: 101 DINSSFGKGSVTRLGSA-GGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTT 158
++ F K S L V +G L LDLALG GGLPKGR+VE++G E+SGKTT
Sbjct: 72 QLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTT 131
Query: 159 LALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCR 218
LALH I E QKLGG +DAE+A DPS ++++GV+ E L++ +P + E L I D + +
Sbjct: 132 LALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTK 191
Query: 219 SGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQ 278
SG++D+I VDSV+AL P+ E++ +G + Q+R+M+QALRK+ + + ++FLNQ
Sbjct: 192 SGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQ 251
Query: 279 IR--YKIGVYYGNPE-VTSGGIALKFFASVRLEIRSTGKIKSXXXXXXXXXXXXXXXXXX 335
+R K +++ + E VT GG AL F A++RL++ TG IK+
Sbjct: 252 VRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKL 311
Query: 336 XXXXPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYL 395
K++E I FG G +L+ A +++R+G Y + + + +G+D A +YL
Sbjct: 312 APGK--KKSELGIHFGHGFYVEREVLELACEHGVILREGTSY-FIEGEVIEGKDAAEKYL 368
Query: 396 RDNPLLQEEIEKVVRSMM 413
+N + + ++R+ +
Sbjct: 369 VENKEALDTVVAILRNQL 386
>TAIR|locus:2103131 [details] [associations]
symbol:AT3G32920 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0009432 "SOS
response" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 KO:K03553 PANTHER:PTHR22942:SF1
EMBL:AP002067 IPI:IPI00528929 RefSeq:NP_189781.4 UniGene:At.53642
ProteinModelPortal:Q3EAS6 SMR:Q3EAS6 GeneID:823055
KEGG:ath:AT3G32920 TAIR:At3g32920 HOGENOM:HOG000034536 OMA:SGRELEW
ArrayExpress:Q3EAS6 Genevestigator:Q3EAS6 GermOnline:AT3G32920
Uniprot:Q3EAS6
Length = 226
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 97/196 (49%), Positives = 134/196 (68%)
Query: 122 VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 180
V F +G LD+ALG GGLPKGR+VEI+GPE+SGKT LALH ++ +L+
Sbjct: 12 VPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLS--------MLLIR-- 61
Query: 181 HAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIE 240
S +KA+GV+ ENL++ QPD G+ AL + D + +SG++D+I VDSV+AL P+ E++
Sbjct: 62 -----SLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVAALVPKGELD 116
Query: 241 GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 300
GE+G + +QARLMSQALRK S + + LIF+NQ+R + G G EVTSGG ALK
Sbjct: 117 GEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRERFG---GPTEVTSGGNALK 173
Query: 301 FFASVRLEIRSTGKIK 316
F+A +RL+I+ G IK
Sbjct: 174 FYAPMRLDIKRIGLIK 189
>DICTYBASE|DDB_G0274901 [details] [associations]
symbol:DDB_G0274901 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009432 "SOS response" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0274901 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000012 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 PANTHER:PTHR22942:SF1
RefSeq:XP_644118.1 ProteinModelPortal:Q555F1
EnsemblProtists:DDB0217538 GeneID:8619547 KEGG:ddi:DDB_G0274901
Uniprot:Q555F1
Length = 458
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/112 (28%), Positives = 61/112 (54%)
Query: 173 NAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSA 232
N + +D+E++F+ ++ +G+++ N V QP+N E A E+ + ++ +I +DS+S+
Sbjct: 154 NVLYIDSENSFNSEWASKIGMNLSNCTVFQPNNSEEAFELIKKSLKNQIFKVIILDSLSS 213
Query: 233 LTPRAEIEGEI---GMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY 281
L +IE + Q IG ++ L ++S + C IF NQ+RY
Sbjct: 214 LMSIKDIESNLVENHYQNIGFD--WITSNLNEISNLLIDSNCCFIFTNQMRY 263
>FB|FBgn0003479 [details] [associations]
symbol:spn-A "spindle A" species:7227 "Drosophila
melanogaster" [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;NAS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0007143
"female meiosis" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0009949 GO:GO:0007294 GO:GO:0003684 GO:GO:0007143
GO:GO:0008298 GO:GO:0030717 GO:GO:0000075 GO:GO:0045003
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D37788 EMBL:D17726 EMBL:L41342
EMBL:BT001791 RefSeq:NP_524583.1 RefSeq:NP_733342.1 UniGene:Dm.1913
ProteinModelPortal:Q27297 SMR:Q27297 DIP:DIP-20846N IntAct:Q27297
MINT:MINT-337614 STRING:Q27297 PaxDb:Q27297 PRIDE:Q27297
EnsemblMetazoa:FBtr0085589 GeneID:43577 KEGG:dme:Dmel_CG7948
CTD:43577 FlyBase:FBgn0003479 InParanoid:Q27297 OrthoDB:EOG4P2NHW
PhylomeDB:Q27297 GenomeRNAi:43577 NextBio:834653 Bgee:Q27297
GermOnline:CG7948 GO:GO:0009951 Uniprot:Q27297
Length = 336
Score = 123 (48.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 56/208 (26%), Positives = 89/208 (42%)
Query: 127 SGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEV------QKLG-GNAMLVDA 179
+G LD LGGG+ G I EIFG GKT L H +A QK G G M +D
Sbjct: 101 TGSKELDKLLGGGIETGSITEIFGEFRCGKTQLC-HTLAVTCQLPISQKGGEGKCMYIDT 159
Query: 180 EHAFDPSYSKALGVD--------VENLIVCQPDNGEMA---LEIADRMCRSGAIDLICVD 228
E+ F P A+ ++N+ + N + +++A M L+ VD
Sbjct: 160 ENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALLIVD 219
Query: 229 SVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYG 288
S AL R++ IG ++ + + LR + A + G ++ NQ+ + G
Sbjct: 220 SAMALY-RSDY---IGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPG 275
Query: 289 --NPEVTSGGIALKFFASVRLEIRSTGK 314
+ + GG + ++ RL +R GK
Sbjct: 276 MFDAKKPIGGHIMAHSSTTRLYLRK-GK 302
>TAIR|locus:2084558 [details] [associations]
symbol:DMC1 "DISRUPTION OF MEIOTIC CONTROL 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA;IDA] [GO:0006281
"DNA repair" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051026 "chiasma assembly" evidence=IGI;IMP] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA;TAS] [GO:0010212 "response to ionizing radiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0006259 EMBL:AP001300 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0000733 GO:GO:0008094 GO:GO:0051026 EMBL:D45415 EMBL:U76670
EMBL:BT023447 IPI:IPI00517160 PIR:JC4092 RefSeq:NP_188928.2
UniGene:At.50216 ProteinModelPortal:Q39009 SMR:Q39009 IntAct:Q39009
MINT:MINT-5222993 STRING:Q39009 EnsemblPlants:AT3G22880.1
GeneID:821860 KEGG:ath:AT3G22880 GeneFarm:4784 TAIR:At3g22880
eggNOG:COG0468 HOGENOM:HOG000227426 InParanoid:Q39009 KO:K10872
OMA:FFQDIDL PhylomeDB:Q39009 ProtClustDB:PLN03187
Genevestigator:Q39009 GermOnline:AT3G22880 GO:GO:0000707
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 Uniprot:Q39009
Length = 344
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 56/236 (23%), Positives = 100/236 (42%)
Query: 96 DAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSG 155
+AA +N + GS + + T GC LD LGGG+ I E FG SG
Sbjct: 82 EAAEKIVNFGYMTGSDALIKRKSVVKITT---GCQALDDLLGGGIETSAITEAFGEFRSG 138
Query: 156 KTTLALHAIAEVQKL-----GGNAML--VDAEHAFDPS----YSKALGVD----VENLIV 200
KT LA H + +L GGN + +D E F P ++ G+D ++N+I
Sbjct: 139 KTQLA-HTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIY 197
Query: 201 CQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 260
+ E + + + + + V ++ ++ G ++ + + ++Q L
Sbjct: 198 ARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFT-GRGELADRQQKLAQMLS 256
Query: 261 KMSGNASKAGCTLIFLNQIRYKIG--VYYGNPEVTSGGIALKFFASVRLEIRSTGK 314
++ A + + NQ+ G ++ +P+ +GG L A++RL R GK
Sbjct: 257 RLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRLLFRK-GK 311
>UNIPROTKB|Q881T9 [details] [associations]
symbol:PSPTO_2793 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:NOG05914
HOGENOM:HOG000222360 OMA:RVLKCRG ProtClustDB:CLSK866028
InterPro:IPR017166 PIRSF:PIRSF037290 RefSeq:NP_792598.1
ProteinModelPortal:Q881T9 GeneID:1184447 KEGG:pst:PSPTO_2793
PATRIC:19996935 BioCyc:PSYR223283:GJIX-2840-MONOMER Uniprot:Q881T9
Length = 206
Score = 109 (43.4 bits), Expect = 0.00093, P = 0.00093
Identities = 44/139 (31%), Positives = 65/139 (46%)
Query: 122 VETFPSGCLTLDLALG-GGLPKGRIVEIFGPES-SGKTTLALHAIAEVQKLGGNAMLVDA 179
V PSG LD AL GG P + EI P + SG+ L ++A + +G +LV
Sbjct: 27 VSPHPSGHAALDSALPTGGWPASALTEILIPANGSGELRLLWPSLARLSAIGERIVLVAP 86
Query: 180 EHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAID-LIC----VDSVSALT 234
+ P A GVD+ L+V + + AL A++ RSG+ ++C VD AL
Sbjct: 87 PYIPYPQAWLAAGVDLRQLVVIEASTRD-ALWAAEQCLRSGSCGAVLCWPGMVDD-RALR 144
Query: 235 PRAEIEGEIGMQQIGLQAR 253
R ++ E G Q + R
Sbjct: 145 -RLQVAAETG-QTLAFTCR 161
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 440 406 0.00078 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 606 (64 KB)
Total size of DFA: 225 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.72u 0.09s 30.81t Elapsed: 00:00:02
Total cpu time: 30.72u 0.09s 30.81t Elapsed: 00:00:02
Start: Sat May 11 04:17:16 2013 End: Sat May 11 04:17:18 2013