BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013567
(440 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224115208|ref|XP_002332188.1| predicted protein [Populus trichocarpa]
gi|222875295|gb|EEF12426.1| predicted protein [Populus trichocarpa]
Length = 387
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/386 (87%), Positives = 360/386 (93%), Gaps = 5/386 (1%)
Query: 39 SSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNG--FSSDSGDSRFLDRQRALD 96
S PL+ Q SR F T S +A +K+ K+I CEFD KVNG SSD D+RFLD+Q+AL+
Sbjct: 4 SLPLYFQFSRVCFKT--SHFAAVKKKPKEIRCEFDSKVNGSPLSSDL-DARFLDKQKALE 60
Query: 97 AAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGK 156
AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEIFGPESSGK
Sbjct: 61 AAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIFGPESSGK 120
Query: 157 TTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRM 216
TTLALHAIAEVQK GG+AMLVDAEHAFDP+YSKALGVDVENLIVCQPDNGEMALEIADRM
Sbjct: 121 TTLALHAIAEVQKFGGHAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIADRM 180
Query: 217 CRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFL 276
CRSGA+DLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFL
Sbjct: 181 CRSGAVDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFL 240
Query: 277 NQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSK 336
NQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSK
Sbjct: 241 NQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSK 300
Query: 337 VSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLR 396
VSRPYKQAEFEIIFGEGVS+LGC+LDCAEMMD+VV+KG+WYSYGD RLGQGRDKALQYLR
Sbjct: 301 VSRPYKQAEFEIIFGEGVSQLGCILDCAEMMDVVVKKGSWYSYGDHRLGQGRDKALQYLR 360
Query: 397 DNPLLQEEIEKVVRSMMSDGSVHQGS 422
DNP LQEEIEK VRS M+DG+V+ G+
Sbjct: 361 DNPHLQEEIEKKVRSTMTDGTVNMGT 386
>gi|225462225|ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Vitis vinifera]
Length = 415
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/381 (83%), Positives = 350/381 (91%), Gaps = 1/381 (0%)
Query: 61 ARKRDKKISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGA 120
A+++ ++ CEF+ KVNG S D RFLDRQ+AL+AAMNDINSSFGKGSVTRLGSAGGA
Sbjct: 34 AKRQQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGA 93
Query: 121 LVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 180
LVETFPSGCLTLD ALGGGLPKGRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAE
Sbjct: 94 LVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 153
Query: 181 HAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIE 240
HAFDP+YSKALGVDVENLIVCQPD+GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIE
Sbjct: 154 HAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIE 213
Query: 241 GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 300
GEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK
Sbjct: 214 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 273
Query: 301 FFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCM 360
FFAS+RLEIR GKIKS KGDED+G+RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+
Sbjct: 274 FFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCI 333
Query: 361 LDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQ 420
LDCAE+MD+VV+KG+WYSYGD RLGQGRD+ALQYLR+NPL+ EIEK+VR MM++G
Sbjct: 334 LDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQL 393
Query: 421 GS-FLRNVSLPNQEENILEEF 440
G+ +R ++E+ILEE
Sbjct: 394 GAPHVRLSPTSPEDEDILEEI 414
>gi|18412241|ref|NP_565198.1| DNA repair protein recA-like 1 [Arabidopsis thaliana]
gi|2500098|sp|Q39199.1|RECAC_ARATH RecName: Full=DNA repair protein recA homolog 1, chloroplastic;
AltName: Full=Recombinase A homolog 1; Flags: Precursor
gi|289208|gb|AAA61781.1| chloroplast DNA repair protein precursor [Arabidopsis thaliana]
gi|3152570|gb|AAC17051.1| Match to nuclear-encoded chloroplast DNA repair protein (E. coli
recA homolog) gb|L15229 [Arabidopsis thaliana]
gi|15292903|gb|AAK92822.1| putative replicase [Arabidopsis thaliana]
gi|21281181|gb|AAM45008.1| putative replicase [Arabidopsis thaliana]
gi|332198076|gb|AEE36197.1| DNA repair protein recA-like 1 [Arabidopsis thaliana]
Length = 439
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/402 (80%), Positives = 353/402 (87%)
Query: 23 FSPFNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSD 82
F+P + S S L S SR + + AA+K KIS EFD ++NG S
Sbjct: 15 FTPLSPLFPFTPCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSP 74
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
DSRFLDRQ+AL+AAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLDLALGGGLPK
Sbjct: 75 DADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPK 134
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR+VEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YSKALGVDVENLIVCQ
Sbjct: 135 GRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 194
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PDNGEMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKM
Sbjct: 195 PDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 254
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRS GKIKS KGDE
Sbjct: 255 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDE 314
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
D+G+R RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGC+LDCAE+M++VV+KG+WYSY DQ
Sbjct: 315 DIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQ 374
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFL 424
RLGQGR+KALQ+LR+NP LQ+EIEK VR +M DG VH+ + L
Sbjct: 375 RLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPL 416
>gi|296082805|emb|CBI21810.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/381 (83%), Positives = 350/381 (91%), Gaps = 1/381 (0%)
Query: 61 ARKRDKKISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGA 120
A+++ ++ CEF+ KVNG S D RFLDRQ+AL+AAMNDINSSFGKGSVTRLGSAGGA
Sbjct: 3 AKRQQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGA 62
Query: 121 LVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 180
LVETFPSGCLTLD ALGGGLPKGRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAE
Sbjct: 63 LVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 122
Query: 181 HAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIE 240
HAFDP+YSKALGVDVENLIVCQPD+GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIE
Sbjct: 123 HAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIE 182
Query: 241 GEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 300
GEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK
Sbjct: 183 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 242
Query: 301 FFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCM 360
FFAS+RLEIR GKIKS KGDED+G+RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+
Sbjct: 243 FFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCI 302
Query: 361 LDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQ 420
LDCAE+MD+VV+KG+WYSYGD RLGQGRD+ALQYLR+NPL+ EIEK+VR MM++G
Sbjct: 303 LDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQL 362
Query: 421 GS-FLRNVSLPNQEENILEEF 440
G+ +R ++E+ILEE
Sbjct: 363 GAPHVRLSPTSPEDEDILEEI 383
>gi|166841|gb|AAA32855.1| replicase, partial [Arabidopsis thaliana]
Length = 438
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/402 (80%), Positives = 353/402 (87%)
Query: 23 FSPFNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSD 82
F+P + S S L S SR + + AA+K KIS EFD ++NG S
Sbjct: 14 FTPLSPLFPFTPCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSP 73
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
DSRFLDRQ+AL+AAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLDLALGGGLPK
Sbjct: 74 DADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPK 133
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR+VEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YSKALGVDVENLIVCQ
Sbjct: 134 GRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 193
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PDNGEMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKM
Sbjct: 194 PDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 253
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRS GKIKS KGDE
Sbjct: 254 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDE 313
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
D+G+R RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGC+LDCAE+M++VV+KG+WYSY DQ
Sbjct: 314 DIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQ 373
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFL 424
RLGQGR+KALQ+LR+NP LQ+EIEK VR +M DG VH+ + L
Sbjct: 374 RLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPL 415
>gi|449466614|ref|XP_004151021.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Cucumis sativus]
Length = 417
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/400 (80%), Positives = 358/400 (89%), Gaps = 3/400 (0%)
Query: 41 PLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMN 100
P SS R + SS LS A KR +++ CEF+ +NG S D R +DR++AL+AAMN
Sbjct: 20 PQCAASSGPRQWLPSS-LSNAGKRVRELRCEFEVNLNGALSGDFDPRSVDRKKALEAAMN 78
Query: 101 DINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLA 160
DIN SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEIFGPESSGKTTLA
Sbjct: 79 DINGSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLA 138
Query: 161 LHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSG 220
LHAIAEVQKLGGNAMLVDAEHAFDP+YSKA+GVDVENLIVCQPD+GEMALEIADRMCRSG
Sbjct: 139 LHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSG 198
Query: 221 AIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIR 280
A+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIR
Sbjct: 199 AVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIR 258
Query: 281 YKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRP 340
YKIGVYYGNPEVTSGGIALKFFAS+RLEIRS GK+KS KGDE++G+RVRVRVQKSKVSRP
Sbjct: 259 YKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDEEIGIRVRVRVQKSKVSRP 318
Query: 341 YKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPL 400
YKQAEFEIIFGEGVSKLGC+LDCAE+M+IVV+KG+WYSYGDQRLGQGRD+ALQY +DNP
Sbjct: 319 YKQAEFEIIFGEGVSKLGCILDCAEIMEIVVKKGSWYSYGDQRLGQGRDRALQYFKDNPA 378
Query: 401 LQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEEF 440
LQ+EIEK +++M++ G+V G LPNQE +LEEF
Sbjct: 379 LQDEIEKTLQTMLTSGTVQMGFQSIRKPLPNQE--VLEEF 416
>gi|227204159|dbj|BAH56931.1| AT1G79050 [Arabidopsis thaliana]
Length = 448
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/411 (78%), Positives = 353/411 (85%), Gaps = 9/411 (2%)
Query: 23 FSPFNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSD 82
F+P + S S L S SR + + AA+K KIS EFD ++NG S
Sbjct: 15 FTPLSPLFPFTPCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSP 74
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
DSRFLDRQ+AL+AAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLDLALGGGLPK
Sbjct: 75 DADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPK 134
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR+VEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YSKALGVDVENLIVCQ
Sbjct: 135 GRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 194
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PDNGEMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKM
Sbjct: 195 PDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 254
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRS GKIKS KGDE
Sbjct: 255 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDE 314
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
D+G+R RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGC+LDCAE+M++VV+KG+WYSY DQ
Sbjct: 315 DIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQ 374
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMS---------DGSVHQGSFL 424
RLGQGR+KALQ+LR+NP LQ+EIEK VR +M DG VH+ + L
Sbjct: 375 RLGQGREKALQHLRENPALQDEIEKKVRLLMVLQKVRLLMLDGEVHRSTPL 425
>gi|356556644|ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
[Glycine max]
Length = 414
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 319/417 (76%), Positives = 358/417 (85%), Gaps = 11/417 (2%)
Query: 26 FNMKTHSCLLS--ISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDS 83
F +K H +L +SSS L R R TA + I CE +G+ NG S
Sbjct: 5 FPLKPHCVILKAPLSSSLLFPFPLRFRAVTAF--------KHANIQCELEGRPNGALSGD 56
Query: 84 GDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKG 143
D RF+DRQ+AL+AAMNDIN++FGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKG
Sbjct: 57 FDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKG 116
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RI+EI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YSKALGVDVENLIVCQP
Sbjct: 117 RIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 176
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D+GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS
Sbjct: 177 DHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 236
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLE+R TGKIKS KGDE+
Sbjct: 237 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIKSAKGDEE 296
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
+G++VR+RVQKSKVSRPYK AEFEIIFGEG+SKLGC+LDCAEM DIV +KG+WYSYGD R
Sbjct: 297 IGLKVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYSYGDHR 356
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS-FLRNVSLPNQEENILEE 439
LGQGRDKA+QYL++N L EEIEKVVRS + DG+ ++N S+ +Q++++ EE
Sbjct: 357 LGQGRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPVHMKNSSVLHQDDDMFEE 413
>gi|255578168|ref|XP_002529953.1| DNA repair protein reca, putative [Ricinus communis]
gi|223530551|gb|EEF32430.1| DNA repair protein reca, putative [Ricinus communis]
Length = 343
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 306/343 (89%), Positives = 328/343 (95%), Gaps = 1/343 (0%)
Query: 99 MNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTT 158
MNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEI+GPESSGKTT
Sbjct: 1 MNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTT 60
Query: 159 LALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCR 218
LALHAIAE+QKLGGNAMLVDAEHAFDP+YSKALGVDVENLIVCQPDNGEMALEIADRMCR
Sbjct: 61 LALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIADRMCR 120
Query: 219 SGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQ 278
SGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQ
Sbjct: 121 SGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLVFLNQ 180
Query: 279 IRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVS 338
IRYKIGVYYGNPEVTSGGIALKFFASVRLEIRS GKIKS KGDEDVG+RVRVRVQKSKVS
Sbjct: 181 IRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSNGKIKSAKGDEDVGLRVRVRVQKSKVS 240
Query: 339 RPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDN 398
RPYKQAEFEIIFGEGVS+LGC+LDCAEMMD+VV+KG+WYSYG+ RLGQGRD+ALQYLRDN
Sbjct: 241 RPYKQAEFEIIFGEGVSRLGCVLDCAEMMDVVVKKGSWYSYGEHRLGQGRDRALQYLRDN 300
Query: 399 PLLQEEIEKVVRSMMSDGSVHQGS-FLRNVSLPNQEENILEEF 440
P L EEIEK VRSMM+DG+V+ S + RN LP ++EN+LEE
Sbjct: 301 PHLHEEIEKKVRSMMADGTVNTASLYSRNSPLPLEDENVLEEI 343
>gi|357120609|ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
isoform 1 [Brachypodium distachyon]
Length = 412
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 308/402 (76%), Positives = 346/402 (86%), Gaps = 2/402 (0%)
Query: 40 SPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKV-NGFSSDSGDSRFLDRQRALDAA 98
+P R R + S R +++ CEF V NG S D R +DRQ+ALDAA
Sbjct: 11 TPAVLPRPRRRVSATRASASGTTGRGRRLRCEFVASVGNGALSGEDDPRLIDRQKALDAA 70
Query: 99 MNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTT 158
MNDIN+SFGKGSVTRLGSAGGA VETFPSGCLTLD ALGGGLPKGR+VE++GPESSGKTT
Sbjct: 71 MNDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTT 130
Query: 159 LALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCR 218
LALHAIAE+QKLGGNAMLVDAEHAFDP+YSKALGVD+ENLIVCQPDNGEMALEIADRMCR
Sbjct: 131 LALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCR 190
Query: 219 SGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQ 278
SGAIDLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQ
Sbjct: 191 SGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQ 250
Query: 279 IRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVS 338
IRYKIGV+YGNPEVTSGGIALKFFASVRLEIR GKIKS KGDEDVGV+VRVRVQKSKVS
Sbjct: 251 IRYKIGVFYGNPEVTSGGIALKFFASVRLEIRHIGKIKSAKGDEDVGVKVRVRVQKSKVS 310
Query: 339 RPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDN 398
RPYKQAEFEI+FGEGVSKLGC+LDCAE+M++V +KG+WYSY D RLGQGR+KALQYLR++
Sbjct: 311 RPYKQAEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYKDIRLGQGREKALQYLRES 370
Query: 399 PLLQEEIEKVVRSMMSDGSVHQGSF-LRNVSLPNQEENILEE 439
P + +EIEKVVR+M+ +G+ H S P +EE + +E
Sbjct: 371 PTICDEIEKVVRAMIPEGTRHMTLLAFGQSSSPTEEEEVYDE 412
>gi|242038743|ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
gi|241920620|gb|EER93764.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
Length = 415
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 306/377 (81%), Positives = 339/377 (89%), Gaps = 1/377 (0%)
Query: 64 RDKKISCEF-DGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALV 122
R +++ CEF G NG S D R +DRQ+ALDAAMNDINSSFGKGSVTRLGSAGGA V
Sbjct: 38 RARRLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFV 97
Query: 123 ETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 182
ETFPSGCLTLD ALGGGLPKGR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA
Sbjct: 98 ETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 157
Query: 183 FDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGE 242
FDP+YSKALGVD+ENLIVCQPDNGEMALEIADRMCRSGAIDLIC+DSVSALTPRAEIEGE
Sbjct: 158 FDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGE 217
Query: 243 IGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFF 302
IGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFF
Sbjct: 218 IGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFF 277
Query: 303 ASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLD 362
ASVRLEIR GKIKS KGDEDVGV+VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LD
Sbjct: 278 ASVRLEIRPIGKIKSPKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLD 337
Query: 363 CAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
CAE+MD+V +KG+WYSY D RLGQGR+KALQYLR++P + +EIEKVVR+M+ +GS H
Sbjct: 338 CAELMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICDEIEKVVRAMIPEGSRHMSL 397
Query: 423 FLRNVSLPNQEENILEE 439
+ ++E + +E
Sbjct: 398 LAFGQTSSTEDEQVYDE 414
>gi|115454275|ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
gi|108710024|gb|ABF97819.1| DNA repair protein recA, chloroplast precursor, putative, expressed
[Oryza sativa Japonica Group]
gi|113549209|dbj|BAF12652.1| Os03g0639700 [Oryza sativa Japonica Group]
gi|215704578|dbj|BAG94211.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 418
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 315/437 (72%), Positives = 356/437 (81%), Gaps = 20/437 (4%)
Query: 4 LAAAAVPLKAKLGVCHQLCFSPFNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARK 63
+AAA V ++ G H L P + R+ +A + A
Sbjct: 1 MAAATVAASSRFGPAHLL-------------------PRSRRKGRAPAPSARATACGAVG 41
Query: 64 RDKKISCEF-DGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALV 122
R +++ CEF G NG S D R +DRQ+ALDAAMNDINSSFGKGSVTRLGSAGGA V
Sbjct: 42 RGRRLRCEFVAGGGNGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFV 101
Query: 123 ETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 182
ETFPSGCLTLD ALGGGLPKGR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA
Sbjct: 102 ETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 161
Query: 183 FDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGE 242
FDP+YSKALGVD+ENLIVCQPDNGEMALEIADRMCRSGAIDLIC+DSVSALTPRAEIEGE
Sbjct: 162 FDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGE 221
Query: 243 IGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFF 302
IGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFF
Sbjct: 222 IGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFF 281
Query: 303 ASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLD 362
ASVRLEIR GKIKS KGDEDVGV+VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LD
Sbjct: 282 ASVRLEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLD 341
Query: 363 CAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
CAE+M++V +KG+WYSY + RLGQGR+KALQYLR++P + +EIEK VR+M+ +G+ H
Sbjct: 342 CAELMEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHMSL 401
Query: 423 FLRNVSLPNQEENILEE 439
S +EE + +E
Sbjct: 402 LAFGRSSLTEEEQVDDE 418
>gi|226533038|ref|NP_001148809.1| protein recA [Zea mays]
gi|195622282|gb|ACG32971.1| protein recA [Zea mays]
gi|238008650|gb|ACR35360.1| unknown [Zea mays]
gi|414871794|tpg|DAA50351.1| TPA: putative recA DNA recombination family protein isoform 1 [Zea
mays]
gi|414871795|tpg|DAA50352.1| TPA: putative recA DNA recombination family protein isoform 2 [Zea
mays]
Length = 415
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/377 (80%), Positives = 336/377 (89%), Gaps = 1/377 (0%)
Query: 64 RDKKISCEF-DGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALV 122
R +++ CEF G NG S D R +DRQ+ LDAAMNDIN+SFGKGSVTRLGSAGGA V
Sbjct: 38 RARRLRCEFVAGGGNGALSGEDDPRLVDRQKVLDAAMNDINNSFGKGSVTRLGSAGGAFV 97
Query: 123 ETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 182
ETFPSGCLTLD ALGGGLPKGR+VE++GPESSGKTTLALHAIAE+QKLGGNAMLVDAEHA
Sbjct: 98 ETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHA 157
Query: 183 FDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGE 242
FDP+YSKALGVD+ENLIVCQPDNGEMALEIADRMCRSGAIDLIC+DSVSALTPRAEIEGE
Sbjct: 158 FDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGE 217
Query: 243 IGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFF 302
IGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFF
Sbjct: 218 IGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFF 277
Query: 303 ASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLD 362
ASVRLEIR GKIKS KGDEDVGV+VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LD
Sbjct: 278 ASVRLEIRLIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLD 337
Query: 363 CAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
CAE+MD+V +KG+WYSY D RLGQGR+KALQYLR++P +EIEKVVR+M+ +GS H
Sbjct: 338 CAELMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTTCDEIEKVVRAMIPEGSRHMSL 397
Query: 423 FLRNVSLPNQEENILEE 439
S ++E +E
Sbjct: 398 LAFGQSSSTEDEQAYDE 414
>gi|357120611|ref|XP_003562019.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
isoform 2 [Brachypodium distachyon]
Length = 430
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 308/420 (73%), Positives = 346/420 (82%), Gaps = 20/420 (4%)
Query: 40 SPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKV-NGFSSDSGDSRFLDRQRALDAA 98
+P R R + S R +++ CEF V NG S D R +DRQ+ALDAA
Sbjct: 11 TPAVLPRPRRRVSATRASASGTTGRGRRLRCEFVASVGNGALSGEDDPRLIDRQKALDAA 70
Query: 99 MNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTT 158
MNDIN+SFGKGSVTRLGSAGGA VETFPSGCLTLD ALGGGLPKGR+VE++GPESSGKTT
Sbjct: 71 MNDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTT 130
Query: 159 LALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEI------ 212
LALHAIAE+QKLGGNAMLVDAEHAFDP+YSKALGVD+ENLIVCQPDNGEMALEI
Sbjct: 131 LALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEISRTFVF 190
Query: 213 ------------ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 260
ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALR
Sbjct: 191 VNLTCMSLSLSVADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR 250
Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 320
KMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIR GKIKS KG
Sbjct: 251 KMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRHIGKIKSAKG 310
Query: 321 DEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYG 380
DEDVGV+VRVRVQKSKVSRPYKQAEFEI+FGEGVSKLGC+LDCAE+M++V +KG+WYSY
Sbjct: 311 DEDVGVKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYK 370
Query: 381 DQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSF-LRNVSLPNQEENILEE 439
D RLGQGR+KALQYLR++P + +EIEKVVR+M+ +G+ H S P +EE + +E
Sbjct: 371 DIRLGQGREKALQYLRESPTICDEIEKVVRAMIPEGTRHMTLLAFGQSSSPTEEEEVYDE 430
>gi|218193384|gb|EEC75811.1| hypothetical protein OsI_12760 [Oryza sativa Indica Group]
gi|222625431|gb|EEE59563.1| hypothetical protein OsJ_11852 [Oryza sativa Japonica Group]
Length = 436
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 315/455 (69%), Positives = 356/455 (78%), Gaps = 38/455 (8%)
Query: 4 LAAAAVPLKAKLGVCHQLCFSPFNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARK 63
+AAA V ++ G H L P + R+ +A + A
Sbjct: 1 MAAATVAASSRFGPAHLL-------------------PRSRRKGRAPAPSARATACGAVG 41
Query: 64 RDKKISCEF-DGKVNGFSSDSGDSRFLDR------------------QRALDAAMNDINS 104
R +++ CEF G NG S D R +DR Q+ALDAAMNDINS
Sbjct: 42 RGRRLRCEFVAGGGNGALSGEDDPRLIDRRQECNRGFRATNMNNNVMQKALDAAMNDINS 101
Query: 105 SFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAI 164
SFGKGSVTRLGSAGGA VETFPSGCLTLD ALGGGLPKGR+VE++GPESSGKTTLALHAI
Sbjct: 102 SFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAI 161
Query: 165 AEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDL 224
AEVQKLGGNAMLVDAEHAFDP+YSKALGVD+ENLIVCQPDNGEMALEIADRMCRSGAIDL
Sbjct: 162 AEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDL 221
Query: 225 ICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIG 284
IC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIG
Sbjct: 222 ICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIG 281
Query: 285 VYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQA 344
V+YGNPEVTSGGIALKFFASVRLEIR GKIKS KGDEDVGV+VRVRVQKSKVSRPYKQA
Sbjct: 282 VFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQA 341
Query: 345 EFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEE 404
EFEIIFGEGVSKLGC+LDCAE+M++V +KG+WYSY + RLGQGR+KALQYLR++P + +E
Sbjct: 342 EFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDE 401
Query: 405 IEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
IEK VR+M+ +G+ H S +EE + +E
Sbjct: 402 IEKAVRAMIPEGARHMSLLAFGRSSLTEEEQVDDE 436
>gi|223945977|gb|ACN27072.1| unknown [Zea mays]
gi|414871796|tpg|DAA50353.1| TPA: putative recA DNA recombination family protein [Zea mays]
Length = 433
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 303/395 (76%), Positives = 336/395 (85%), Gaps = 19/395 (4%)
Query: 64 RDKKISCEF-DGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALV 122
R +++ CEF G NG S D R +DRQ+ LDAAMNDIN+SFGKGSVTRLGSAGGA V
Sbjct: 38 RARRLRCEFVAGGGNGALSGEDDPRLVDRQKVLDAAMNDINNSFGKGSVTRLGSAGGAFV 97
Query: 123 ETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 182
ETFPSGCLTLD ALGGGLPKGR+VE++GPESSGKTTLALHAIAE+QKLGGNAMLVDAEHA
Sbjct: 98 ETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHA 157
Query: 183 FDPSYSKALGVDVENLIVCQPDNGEMALE------------------IADRMCRSGAIDL 224
FDP+YSKALGVD+ENLIVCQPDNGEMALE +ADRMCRSGAIDL
Sbjct: 158 FDPAYSKALGVDIENLIVCQPDNGEMALENGTEQLLTASAPQNSAILVADRMCRSGAIDL 217
Query: 225 ICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIG 284
IC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIG
Sbjct: 218 ICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIG 277
Query: 285 VYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQA 344
V+YGNPEVTSGGIALKFFASVRLEIR GKIKS KGDEDVGV+VRVRVQKSKVSRPYKQA
Sbjct: 278 VFYGNPEVTSGGIALKFFASVRLEIRLIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQA 337
Query: 345 EFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEE 404
EFEIIFGEGVSKLGC+LDCAE+MD+V +KG+WYSY D RLGQGR+KALQYLR++P +E
Sbjct: 338 EFEIIFGEGVSKLGCVLDCAELMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTTCDE 397
Query: 405 IEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
IEKVVR+M+ +GS H S ++E +E
Sbjct: 398 IEKVVRAMIPEGSRHMSLLAFGQSSSTEDEQAYDE 432
>gi|449526006|ref|XP_004170006.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like,
partial [Cucumis sativus]
Length = 317
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/318 (86%), Positives = 300/318 (94%), Gaps = 2/318 (0%)
Query: 123 ETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 182
ETFPSGCLTLD ALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA
Sbjct: 1 ETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 60
Query: 183 FDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGE 242
FDP+YSKA+GVDVENLIVCQPD+GEMALEIADRMCRSGA+DLICVDSVSALTPRAEIEGE
Sbjct: 61 FDPTYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGE 120
Query: 243 IGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFF 302
IGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFF
Sbjct: 121 IGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFF 180
Query: 303 ASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLD 362
AS+RLEIRS GK+KS KGDE++G+RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC+LD
Sbjct: 181 ASLRLEIRSIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILD 240
Query: 363 CAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
CAE+M+IVV+KG+WYSYGDQRLGQGRD+ALQY +DNP LQ+EIEK +++M++ G+V G
Sbjct: 241 CAEIMEIVVKKGSWYSYGDQRLGQGRDRALQYFKDNPALQDEIEKTLQTMLTSGTVQMGF 300
Query: 423 FLRNVSLPNQEENILEEF 440
LPNQE +LEEF
Sbjct: 301 QSIRKPLPNQE--VLEEF 316
>gi|134122760|dbj|BAF49678.1| RecA [Physcomitrella patens]
Length = 460
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 286/408 (70%), Positives = 334/408 (81%), Gaps = 9/408 (2%)
Query: 10 PLKAKLGVCHQLCFSPFN--MKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKK 67
P K V L P N M + S L+ S + C++ T+ SA R + KK
Sbjct: 24 PFKGNGRVQRGLLAGPINLRMPSPSQLVQQGSCSISCKAGG----TSKQSGSALRAKAKK 79
Query: 68 ISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPS 127
S + + + + SD +++DRQ+AL+AAM+DIN SFGKGSVTRLGSAGGALVETFPS
Sbjct: 80 GSSDIN--PDDYLSDD-QLQYVDRQKALEAAMSDINGSFGKGSVTRLGSAGGALVETFPS 136
Query: 128 GCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSY 187
GCLTLDLALGGG PKGRIVEIFGPESSGKTTLALHAIAE+QK GGNAMLVDAEH FDP Y
Sbjct: 137 GCLTLDLALGGGFPKGRIVEIFGPESSGKTTLALHAIAEIQKKGGNAMLVDAEHCFDPYY 196
Query: 188 SKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ 247
SKALGVDVE+LIVCQPDNGEMALE ADRMCRSGA+D+I +DSVSALTPRAEIEGEIGMQQ
Sbjct: 197 SKALGVDVESLIVCQPDNGEMALETADRMCRSGAVDIIVIDSVSALTPRAEIEGEIGMQQ 256
Query: 248 IGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRL 307
+GLQARLMSQALRKMS NA++A CT+IFLNQIRYKI V YGNPEVTSGG+ALKFFAS+RL
Sbjct: 257 MGLQARLMSQALRKMSANAARANCTIIFLNQIRYKIAVMYGNPEVTSGGLALKFFASLRL 316
Query: 308 EIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMM 367
+IR+TGKIKS +G++D+G+R RVRVQKSKVSRPYKQAEF+IIFGEG+ KLG +LD AE +
Sbjct: 317 DIRNTGKIKSPRGEDDIGIRARVRVQKSKVSRPYKQAEFDIIFGEGICKLGSLLDSAETV 376
Query: 368 DIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSD 415
+VVRKGAWYSYG+ RLGQGRDK +Q+LRD P + +IEKVVR +++
Sbjct: 377 GVVVRKGAWYSYGETRLGQGRDKVVQFLRDYPEVCADIEKVVRERIAE 424
>gi|145327737|ref|NP_001077844.1| DNA repair protein recA-like 1 [Arabidopsis thaliana]
gi|332198077|gb|AEE36198.1| DNA repair protein recA-like 1 [Arabidopsis thaliana]
Length = 343
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/323 (82%), Positives = 281/323 (86%)
Query: 23 FSPFNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSD 82
F+P + S S L S SR + + AA+K KIS EFD ++NG S
Sbjct: 15 FTPLSPLFPFTPCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSP 74
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
DSRFLDRQ+AL+AAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLDLALGGGLPK
Sbjct: 75 DADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPK 134
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR+VEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YSKALGVDVENLIVCQ
Sbjct: 135 GRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 194
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PDNGEMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKM
Sbjct: 195 PDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 254
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRS GKIKS KGDE
Sbjct: 255 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDE 314
Query: 323 DVGVRVRVRVQKSKVSRPYKQAE 345
D+G+R RVRVQKSKVSRPYKQ E
Sbjct: 315 DIGLRARVRVQKSKVSRPYKQEE 337
>gi|414871793|tpg|DAA50350.1| TPA: putative recA DNA recombination family protein [Zea mays]
Length = 266
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/265 (82%), Positives = 240/265 (90%)
Query: 175 MLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALT 234
MLVDAEHAFDP+YSKALGVD+ENLIVCQPDNGEMALEIADRMCRSGAIDLIC+DSVSALT
Sbjct: 1 MLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALT 60
Query: 235 PRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTS 294
PRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTS
Sbjct: 61 PRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTS 120
Query: 295 GGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGV 354
GGIALKFFASVRLEIR GKIKS KGDEDVGV+VRVRVQKSKVSRPYKQAEFEIIFGEGV
Sbjct: 121 GGIALKFFASVRLEIRLIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGV 180
Query: 355 SKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMS 414
SKLGC+LDCAE+MD+V +KG+WYSY D RLGQGR+KALQYLR++P +EIEKVVR+M+
Sbjct: 181 SKLGCVLDCAELMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTTCDEIEKVVRAMIP 240
Query: 415 DGSVHQGSFLRNVSLPNQEENILEE 439
+GS H S ++E +E
Sbjct: 241 EGSRHMSLLAFGQSSSTEDEQAYDE 265
>gi|1350564|sp|P48293.1|RECA_SPIPL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|976445|gb|AAA75282.1| RecA [Arthrospira platensis NIES-39]
gi|291567567|dbj|BAI89839.1| recombination protein RecA [Arthrospira platensis NIES-39]
Length = 365
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/329 (61%), Positives = 267/329 (81%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL++ +N I SFGKGS+ RLG + VET SG LTLDLALGGGLP+GR++EI+
Sbjct: 9 EKQKALNSVLNQIEKSFGKGSIVRLGDSARMKVETISSGALTLDLALGGGLPRGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE+QK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 69 GPESSGKTTLALHAIAEIQKTGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 129 LEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR T +K KG ++ G+R +
Sbjct: 189 GCTVIFLNQLRQKIGIVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KGSDEYGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE ++ RKGAWYSY ++ +GQGRD
Sbjct: 247 VKVAKNKVAPPFRIAEFDIIFGQGISTIGCLIDLAEETGVIKRKGAWYSYNNENIGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
+ + Y+++NP EEI+K VR+ ++ G+V
Sbjct: 307 RTITYMQENPAFTEEIDKRVRAALAGGAV 335
>gi|409991631|ref|ZP_11274875.1| recombinase A [Arthrospira platensis str. Paraca]
gi|409937500|gb|EKN78920.1| recombinase A [Arthrospira platensis str. Paraca]
Length = 404
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/329 (61%), Positives = 267/329 (81%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL++ +N I SFGKGS+ RLG + VET SG LTLDLALGGGLP+GR++EI+
Sbjct: 48 EKQKALNSVLNQIEKSFGKGSIVRLGDSARMKVETISSGALTLDLALGGGLPRGRVIEIY 107
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE+QK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 108 GPESSGKTTLALHAIAEIQKTGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMA 167
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 168 LEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 227
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR T +K KG ++ G+R +
Sbjct: 228 GCTVIFLNQLRQKIGIVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KGSDEYGIRAK 285
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE ++ RKGAWYSY ++ +GQGRD
Sbjct: 286 VKVAKNKVAPPFRIAEFDIIFGQGISTIGCLIDLAEETGVIKRKGAWYSYNNENIGQGRD 345
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
+ + Y+++NP EEI+K VR+ ++ G+V
Sbjct: 346 RTITYMQENPAFTEEIDKRVRAALAGGAV 374
>gi|255080474|ref|XP_002503817.1| recA DNA recombinase [Micromonas sp. RCC299]
gi|226519084|gb|ACO65075.1| recA DNA recombinase [Micromonas sp. RCC299]
Length = 515
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 197/325 (60%), Positives = 271/325 (83%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+++ALD + +I+++FGKGS+ +LG A A V TFPSG +TLD+ALGGG+P+GRIVE++G
Sbjct: 130 KKKALDRVLGEIDANFGKGSIMKLGEASQAKVATFPSGAMTLDIALGGGMPRGRIVEVYG 189
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLALHA+AE+QKLGG L+DAEHAFDP YS+ LG+DV++++VCQP+ GEMAL
Sbjct: 190 PESSGKTTLALHAMAEMQKLGGTVALIDAEHAFDPEYSQRLGLDVDDVVVCQPETGEMAL 249
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
E+ D + RS A+DLI VDSV+AL PR+EIEGEIGM Q+G ARLMSQALRK++ NA+KAG
Sbjct: 250 EVVDTLVRSSAVDLIVVDSVAALVPRSEIEGEIGMVQVGAHARLMSQALRKINVNAAKAG 309
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
T+IFLNQ+R K+GV YGNPE+T+GG ALKF+ASVRL+IR I+ G +D GVRV+V
Sbjct: 310 VTIIFLNQLRSKVGVIYGNPEITTGGNALKFYASVRLDIRRKEVIRGKAGADDEGVRVKV 369
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+K++ PYK AEF+++FG G+S+ GCMLD A+ + ++ R+GAWYSYG++RLGQGR+K
Sbjct: 370 KVAKNKIAPPYKTAEFDMLFGRGISRDGCMLDAADELGVITRRGAWYSYGEERLGQGREK 429
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSD 415
A ++L NP +++++E+ VR ++++
Sbjct: 430 AAEFLDANPEIKKQVEEDVRRVVAE 454
>gi|428223540|ref|YP_007107637.1| recombinase A [Geitlerinema sp. PCC 7407]
gi|427983441|gb|AFY64585.1| RecA protein [Geitlerinema sp. PCC 7407]
Length = 361
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/354 (59%), Positives = 271/354 (76%), Gaps = 6/354 (1%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRI 145
S ++Q+AL+ ++ I +FGKGS+ RLG A VET SG +TLDLALGGGLPKGR+
Sbjct: 7 SENTEKQKALNLVLSQIERNFGKGSIMRLGDASRMKVETISSGAITLDLALGGGLPKGRV 66
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
+EI+GPESSGKTTLALHAIAEVQK GG A VDAEHA DPSYS ALGVD+ENL+V QPD
Sbjct: 67 IEIYGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPSYSAALGVDIENLLVSQPDT 126
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GEM LE+ D++ RS A+D++ VDSV+ALTPRAEIEGE+G Q+G QARLMSQA+RK++GN
Sbjct: 127 GEMGLELVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDAQVGSQARLMSQAMRKITGN 186
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
K+GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G
Sbjct: 187 IGKSGCTVIFLNQLRQKIGISYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFG 244
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
+R +V+V K+KV+ P++ AEF+IIFG+G+S+LGC++D AE +V RKGAWYSY +G
Sbjct: 245 IRAKVKVAKNKVAPPFRIAEFDIIFGKGISRLGCLMDLAEETGVVSRKGAWYSYNGDNIG 304
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
QGRD A++YL +NP L + +E++VR + G+ + N P E+ + EE
Sbjct: 305 QGRDNAIKYLEENPELAQTVEQLVRQKLDTGA----TVSANTIAPTAEDGLAEE 354
>gi|434399337|ref|YP_007133341.1| Protein recA [Stanieria cyanosphaera PCC 7437]
gi|428270434|gb|AFZ36375.1| Protein recA [Stanieria cyanosphaera PCC 7437]
Length = 361
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 262/330 (79%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ + I +FGKG++ RLG A VET PSG LTLD+ALGGGLPKGRI+EI+
Sbjct: 12 DKEKALNLVLKQIERNFGKGAIMRLGDATQMKVETIPSGALTLDVALGGGLPKGRIIEIY 71
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD+ENL+V QPD+GE A
Sbjct: 72 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSAALGVDIENLLVAQPDHGESA 131
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 132 LEIVDQLVRSAAVDLVVVDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 191
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
T+IFLNQ+R KIG+ YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 192 ASTVIFLNQLRQKIGITYGSPEVTTGGTALKFYASVRLDIRRVQTLK--KGSEGEYGIRA 249
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG G+S LGCMLD AE D+VVRKGAWYSY + +GQGR
Sbjct: 250 KVKVAKNKVAPPFRVAEFDIIFGHGISNLGCMLDLAEDTDVVVRKGAWYSYNGENIGQGR 309
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D ++YL +N L EIE+ VR ++ G+V
Sbjct: 310 DNTIKYLEENQTLAAEIEQQVRDKLAMGAV 339
>gi|390440690|ref|ZP_10228902.1| Recombinase A (recA) [Microcystis sp. T1-4]
gi|389836003|emb|CCI33028.1| Recombinase A (recA) [Microcystis sp. T1-4]
Length = 355
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 9 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSDVLGVDINNLLVAQPDTGEAA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 307 DNAVKYLEEKPEVAAEIEKLLRDKLDMGSV 336
>gi|422302291|ref|ZP_16389654.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9806]
gi|389788516|emb|CCI15762.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9806]
Length = 355
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 9 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSDVLGVDINNLLVAQPDTGEAA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 307 DNAVKYLEEKPEVAAEIEKLLRDKLDMGSV 336
>gi|443323255|ref|ZP_21052263.1| protein RecA [Gloeocapsa sp. PCC 73106]
gi|442786993|gb|ELR96718.1| protein RecA [Gloeocapsa sp. PCC 73106]
Length = 359
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/330 (62%), Positives = 264/330 (80%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ ++ I +FGKG++ RLG A VET PSG LTLDLALGGGLPKGRI+EI+
Sbjct: 11 DKEKALNLVLSQIERNFGKGAIMRLGDAIQMRVETIPSGALTLDLALGGGLPKGRIIEIY 70
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ALGVD+ NL+V QPD GE A
Sbjct: 71 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEALGVDIANLLVAQPDTGESA 130
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN SK+
Sbjct: 131 LEIVDQLVRSAAVDLVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNMSKS 190
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GCT+IFLNQ+R KIGV YGNPEVT+GG ALKF+AS+RL+IR +K KG E + G+R
Sbjct: 191 GCTVIFLNQLRQKIGVTYGNPEVTTGGNALKFYASIRLDIRRIQTLK--KGSEVEYGIRA 248
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFGEG+S+LGC+LD AE D+V+RKGAWYSY + QGR
Sbjct: 249 KVKVAKNKVAPPFRIAEFDIIFGEGISRLGCLLDLAEKTDVVIRKGAWYSYKGDNIAQGR 308
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A+ YL + P + E+E+ +R+ + S+
Sbjct: 309 DNAVTYLAERPEMAAEVEQEIRAKLDINSL 338
>gi|425440293|ref|ZP_18820598.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9717]
gi|389719322|emb|CCH96836.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9717]
Length = 355
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 9 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSDVLGVDINNLLVAQPDTGEAA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 307 DNAVKYLEERPEVAAEIEKLLRDKLDMGSV 336
>gi|425434941|ref|ZP_18815405.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9432]
gi|425452928|ref|ZP_18832743.1| Recombinase A (recA) [Microcystis aeruginosa PCC 7941]
gi|425458951|ref|ZP_18838437.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9808]
gi|440756242|ref|ZP_20935443.1| protein RecA [Microcystis aeruginosa TAIHU98]
gi|159029342|emb|CAO90208.1| recA [Microcystis aeruginosa PCC 7806]
gi|389675418|emb|CCH95475.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9432]
gi|389765113|emb|CCI08966.1| Recombinase A (recA) [Microcystis aeruginosa PCC 7941]
gi|389823438|emb|CCI28332.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9808]
gi|440173464|gb|ELP52922.1| protein RecA [Microcystis aeruginosa TAIHU98]
Length = 355
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 261/330 (79%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 9 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEDLGVDINNLLVAQPDTGEAA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 307 DNAVKYLEERPEVAAEIEKLLRDKLDMGSV 336
>gi|425467209|ref|ZP_18846493.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9809]
gi|389830090|emb|CCI28161.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9809]
Length = 355
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 261/330 (79%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 9 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEDLGVDINNLLVAQPDTGEAA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 307 DNAVKYLEERPEVAAEIEKLLRDKLDMGSV 336
>gi|166364348|ref|YP_001656621.1| recombinase A [Microcystis aeruginosa NIES-843]
gi|166086721|dbj|BAG01429.1| double-stranded DNA binding protein [Microcystis aeruginosa
NIES-843]
Length = 355
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 261/330 (79%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 9 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEDLGVDINNLLVAQPDTGEAA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 307 DNAVKYLEERPEVAAEIEKLLRDKLDMGSV 336
>gi|425444877|ref|ZP_18824918.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9443]
gi|389735271|emb|CCI01189.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9443]
Length = 355
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 261/330 (79%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 9 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEDLGVDINNLLVAQPDTGEAA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 307 DNAVKYLEEKPEVAAEIEKLLRDKLDMGSV 336
>gi|443668757|ref|ZP_21134249.1| protein RecA [Microcystis aeruginosa DIANCHI905]
gi|443330719|gb|ELS45414.1| protein RecA [Microcystis aeruginosa DIANCHI905]
Length = 352
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 261/330 (79%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 6 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 65
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ LGVD+ NL+V QPD GE A
Sbjct: 66 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEDLGVDINNLLVAQPDTGEAA 125
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 126 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 185
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 186 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 244 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 304 DNAVKYLEERPEVAAEIEKLLRDKLDMGSV 333
>gi|425454264|ref|ZP_18834010.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9807]
gi|389805113|emb|CCI15312.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9807]
Length = 355
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 261/330 (79%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 9 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEDLGVDINNLLVAQPDTGEAA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 307 DNAVKYLEERPEVAAEIEKLLRDKLDMGSV 336
>gi|425469473|ref|ZP_18848407.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9701]
gi|389880773|emb|CCI38554.1| Recombinase A (recA) [Microcystis aeruginosa PCC 9701]
Length = 355
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 261/330 (79%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR +AL +N I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRIVEI+
Sbjct: 9 DRDKALGLVLNQIERNFGKGSIMRLGDATRMRVETVPSGALTLDMALGGGLPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEDLGVDINNLLVAQPDTGEAA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSSAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQVGCMLDIAEQTNVVTRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL + P + EIEK++R + GSV
Sbjct: 307 DNAVKYLEERPEVAAEIEKLLRDKLDMGSV 336
>gi|209527175|ref|ZP_03275688.1| recA protein [Arthrospira maxima CS-328]
gi|423062609|ref|ZP_17051399.1| recA protein [Arthrospira platensis C1]
gi|209492424|gb|EDZ92766.1| recA protein [Arthrospira maxima CS-328]
gi|406715944|gb|EKD11096.1| recA protein [Arthrospira platensis C1]
Length = 366
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 264/329 (80%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL++ +N I SFGKGS+ RLG + VET SG LTLDLALGGGLP+GR++EI+
Sbjct: 9 EKQKALNSVLNQIEKSFGKGSIVRLGDSARMKVETISSGALTLDLALGGGLPRGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE+QK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 69 GPESSGKTTLALHAIAEIQKTGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 129 LEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR T +K KG ++ G+R +
Sbjct: 189 GCTVIFLNQLRQKIGIVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KGSDEYGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE ++ RKG+WYSY + +GQGRD
Sbjct: 247 VKVAKNKVAPPFRIAEFDIIFGQGISTIGCLIDLAEETGVIKRKGSWYSYNNDNIGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
+ + Y+ +NP ++I+ VR+ ++ G+V
Sbjct: 307 RTITYMEENPEFTKKIDDEVRAALAGGAV 335
>gi|376001605|ref|ZP_09779468.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Arthrospira sp. PCC 8005]
gi|375329992|emb|CCE15221.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Arthrospira sp. PCC 8005]
Length = 366
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 196/329 (59%), Positives = 264/329 (80%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL++ +N I +FGKGS+ RLG + VET SG LTLDLALGGGLP+GR++EI+
Sbjct: 9 EKQKALNSVLNQIEKNFGKGSIVRLGDSARMKVETISSGALTLDLALGGGLPRGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE+QK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 69 GPESSGKTTLALHAIAEIQKTGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 129 LEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR T +K KG ++ G+R +
Sbjct: 189 GCTVIFLNQLRQKIGIVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KGSDEYGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE ++ RKG+WYSY + +GQGRD
Sbjct: 247 VKVAKNKVAPPFRIAEFDIIFGQGISTIGCLIDLAEETGVIKRKGSWYSYNNDNIGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
+ + Y+ +NP ++I+ VR+ ++ G+V
Sbjct: 307 RTITYMEENPEFTKKIDDEVRAALAGGAV 335
>gi|307151323|ref|YP_003886707.1| recA protein [Cyanothece sp. PCC 7822]
gi|306981551|gb|ADN13432.1| recA protein [Cyanothece sp. PCC 7822]
Length = 370
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I SFGKGS+ RLG A VET PSG LTLDLALGGGLPKGR++EI+
Sbjct: 23 DKEKALNLVLNQIERSFGKGSIMRLGDAARMRVETIPSGALTLDLALGGGLPKGRVIEIY 82
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA+AEVQK GG A VDAEHA DP+Y++ALGVD+ NL+V QPD GE A
Sbjct: 83 GPESSGKTTLALHALAEVQKAGGVAAFVDAEHALDPTYAEALGVDIHNLLVAQPDTGESA 142
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 143 LEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 202
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 203 GCVVIFLNQLRQKIGVTYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 260
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCM+D AE D++ RKGAWYSY + QGR
Sbjct: 261 KVKVAKNKVAPPFRIAEFDIIFGKGISQMGCMIDMAEHTDVITRKGAWYSYNGDNIAQGR 320
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL +NP IEK VR + S+
Sbjct: 321 DNAVKYLEENPDTAVIIEKQVREKLDIASL 350
>gi|218245807|ref|YP_002371178.1| recombinase A [Cyanothece sp. PCC 8801]
gi|257058853|ref|YP_003136741.1| recombinase A [Cyanothece sp. PCC 8802]
gi|226737754|sp|B7JZS9.1|RECA_CYAP8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|218166285|gb|ACK65022.1| recA protein [Cyanothece sp. PCC 8801]
gi|256589019|gb|ACU99905.1| recA protein [Cyanothece sp. PCC 8802]
Length = 349
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/346 (60%), Positives = 270/346 (78%), Gaps = 6/346 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL +N I +FGKGS+ RLG A VET SG LTLDLALGGGLP+GRI+EI+
Sbjct: 9 DKEKALGLVLNQIERNFGKGSIMRLGDAARMRVETISSGSLTLDLALGGGLPQGRIIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD++NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPNYSNALGVDIDNLLVAQPDTGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE D+V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISRMGCMLDLAEQTDVVNRKGAWYSYNGENISQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
D A++YL DNP + + IE+ VR + GS++ F + + N+EE
Sbjct: 307 DNAVKYLEDNPEVADTIERQVREKLELGSLN---FAISQTDDNEEE 349
>gi|22299632|ref|NP_682879.1| recombinase A [Thermosynechococcus elongatus BP-1]
gi|30173265|sp|Q8DH70.1|RECA_THEEB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|22295816|dbj|BAC09641.1| recombination protein [Thermosynechococcus elongatus BP-1]
Length = 355
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/321 (62%), Positives = 256/321 (79%), Gaps = 2/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL+ A++ I SFGKGS+ RLG A VET SG LTLDLALGGGLPKGRI+EI+
Sbjct: 12 EKRKALEFAISQIERSFGKGSIMRLGDATSMKVETISSGALTLDLALGGGLPKGRIIEIY 71
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+Y+ AL VD++NL+V QPD GE A
Sbjct: 72 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYAAALRVDIQNLLVAQPDTGEAA 131
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D+I VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN SK
Sbjct: 132 LEIVDQLVRSTAVDIIVVDSVAALVPRAEIEGDMGESHVGLQARLMSQALRKINGNISKT 191
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG+ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 192 GCTVIFLNQLRQKIGLTYGNPETTTGGVALKFYASVRLDIRRVQTLK--KGTEEFGIRAK 249
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G++ LGC+LD AE + ++ RKGAWYSY + L QGRD
Sbjct: 250 VKVAKNKVAPPFRIAEFDIIFGKGIANLGCILDMAEEVGVITRKGAWYSYNGENLAQGRD 309
Query: 390 KALQYLRDNPLLQEEIEKVVR 410
+ Y+ +NP +EIE+ VR
Sbjct: 310 NTINYMEENPSFAQEIEQQVR 330
>gi|126657745|ref|ZP_01728899.1| recombinase A [Cyanothece sp. CCY0110]
gi|126620962|gb|EAZ91677.1| recombinase A [Cyanothece sp. CCY0110]
Length = 347
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/330 (62%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL +N I +FGKGS+ RLG A VET +G LTLDLALGGGLP GR+VEI+
Sbjct: 9 DKEKALGLVLNQIERNFGKGSIMRLGDAARMKVETISTGALTLDLALGGGLPMGRVVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSAALGVDINNLLVAQPDTGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSAAVDVVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE D+V+RKGAWYSY + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGQGISQMGCMLDLAEQSDVVLRKGAWYSYNGDNISQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL +NP + E IE+ VR + GS+
Sbjct: 307 DNAVKYLEENPKIAETIEQQVREKLELGSL 336
>gi|116075773|ref|ZP_01473032.1| recombinase A [Synechococcus sp. RS9916]
gi|116067088|gb|EAU72843.1| recombinase A [Synechococcus sp. RS9916]
Length = 394
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/342 (59%), Positives = 260/342 (76%), Gaps = 2/342 (0%)
Query: 76 VNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLA 135
V S DSR DR +AL+ + I +FGKGS+ RLG A VET P+G LTLDLA
Sbjct: 5 VKAAQSSGSDSRPGDRDKALNLVLGQIERNFGKGSIMRLGDASRMRVETIPTGALTLDLA 64
Query: 136 LGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDV 195
LGGG PKGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVD+
Sbjct: 65 LGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDI 124
Query: 196 ENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLM 255
ENL+V QPD GEMALEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARLM
Sbjct: 125 ENLLVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGSQARLM 184
Query: 256 SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKI 315
SQA+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +
Sbjct: 185 SQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTL 244
Query: 316 KSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGA 375
K +G E+ G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGA
Sbjct: 245 K--RGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGA 302
Query: 376 WYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
WYSY +GQGRD + +L NP ++ IE +VR +++GS
Sbjct: 303 WYSYEGDNIGQGRDNTIGWLEQNPEAKDAIEVLVRQKLTEGS 344
>gi|172039552|ref|YP_001806053.1| recombinase A [Cyanothece sp. ATCC 51142]
gi|354552186|ref|ZP_08971494.1| recA protein [Cyanothece sp. ATCC 51472]
gi|226723626|sp|B1WW59.1|RECA_CYAA5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|171701006|gb|ACB53987.1| recombination protein [Cyanothece sp. ATCC 51142]
gi|353555508|gb|EHC24896.1| recA protein [Cyanothece sp. ATCC 51472]
Length = 349
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL +N I +FGKGS+ RLG A VET +G LTLDLALGGGLP GR+VEI+
Sbjct: 9 DKEKALGLVLNQIERNFGKGSIMRLGDAARMKVETISTGALTLDLALGGGLPMGRVVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSAALGVDINNLLVAQPDTGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSAAVDVVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIG+ YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGITYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE D+V+RKGAWYSY + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGQGISRMGCMLDLAEQSDVVLRKGAWYSYNGDNISQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL +NP + E IE+ VR + GS+
Sbjct: 307 DNAVKYLEENPKIAETIEQQVREKLELGSL 336
>gi|113953696|ref|YP_729672.1| recombinase A [Synechococcus sp. CC9311]
gi|123327976|sp|Q0ID00.1|RECA_SYNS3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|113881047|gb|ABI46005.1| recA protein [Synechococcus sp. CC9311]
Length = 382
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/342 (59%), Positives = 260/342 (76%), Gaps = 2/342 (0%)
Query: 76 VNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLA 135
V S +GDSR +R +ALD + I +FGKGS+ RLG A VET +G LTLDLA
Sbjct: 5 VKAAQSSAGDSRPGERDKALDLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLA 64
Query: 136 LGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDV 195
LGGG PKGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVD+
Sbjct: 65 LGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDI 124
Query: 196 ENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLM 255
ENL+V QPD GEMALEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARLM
Sbjct: 125 ENLLVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGAQARLM 184
Query: 256 SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKI 315
SQA+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +
Sbjct: 185 SQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTL 244
Query: 316 KSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGA 375
K +G E+ G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V RKGA
Sbjct: 245 K--RGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCVLDLAEETGVVTRKGA 302
Query: 376 WYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
WYSY +GQGRD + +L NP ++ IE +VR +++GS
Sbjct: 303 WYSYEGDNIGQGRDNTIGWLEQNPEAKDAIEVLVRQKLTEGS 344
>gi|443316865|ref|ZP_21046293.1| protein RecA [Leptolyngbya sp. PCC 6406]
gi|442783537|gb|ELR93449.1| protein RecA [Leptolyngbya sp. PCC 6406]
Length = 348
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/327 (61%), Positives = 259/327 (79%), Gaps = 2/327 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL +N I +FGKG++ RLG A VET P+G LTLDLALGGGLPKGR++EI+
Sbjct: 10 EKEKALTMVLNQIERNFGKGAIMRLGDASRMKVETIPTGALTLDLALGGGLPKGRVIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA+AEVQKLGG A VDAEHA DP YS+ALGV+V +L+V QPD GE A
Sbjct: 70 GPESSGKTTLALHALAEVQKLGGTAAFVDAEHALDPEYSEALGVNVADLLVSQPDTGEAA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS AIDL+ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ K+
Sbjct: 130 LEIVDQLVRSSAIDLVVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGSIGKS 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 190 GCTVIFLNQLRQKIGVVYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEYGIRAK 247
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF++IFG+G+S LGC++D AE +VVRKGAWYSY + + QGRD
Sbjct: 248 VKVAKNKVAPPFRIAEFDVIFGQGISTLGCIMDLAEQHAVVVRKGAWYSYKGENISQGRD 307
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDG 416
A++ L + P L +E+E +VR ++ G
Sbjct: 308 NAIRLLEEKPELAKELEALVREKLAIG 334
>gi|218441026|ref|YP_002379355.1| recombinase A [Cyanothece sp. PCC 7424]
gi|226737753|sp|B7KLB5.1|RECA_CYAP7 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|218173754|gb|ACK72487.1| recA protein [Cyanothece sp. PCC 7424]
Length = 356
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I SFGKGS+ RLG A VET PSG LTLDLALGGGLPKGR++EI+
Sbjct: 9 DKEKALNLVLNQIERSFGKGSIMRLGDAARMRVETIPSGALTLDLALGGGLPKGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEVLGVDIHNLLVAQPDTGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCM+D AE D++ RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQMGCMIDMAEHTDVITRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL +N + IEK VR + S+
Sbjct: 307 DNAVKYLEENLDVAAIIEKQVREKLDIASL 336
>gi|427419328|ref|ZP_18909511.1| protein RecA [Leptolyngbya sp. PCC 7375]
gi|425762041|gb|EKV02894.1| protein RecA [Leptolyngbya sp. PCC 7375]
Length = 362
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/327 (60%), Positives = 258/327 (78%), Gaps = 2/327 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R++ALD +N I +FGKG++ RLG A VET P+G +TLDLALGGGLPKGRI+EI+
Sbjct: 10 ERKKALDMVLNQIERNFGKGTIMRLGDAQRMKVETIPTGAMTLDLALGGGLPKGRIIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+ ALGV++++L+V QPD GE A
Sbjct: 70 GPESSGKTTLALHAIAEAQKQGGVAAFVDAEHALDPVYAGALGVNIDDLLVSQPDTGEAA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN K+
Sbjct: 130 LEIVDQLVRSSAVDLVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKITGNIGKS 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG++ G+R +
Sbjct: 190 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGNDQFGIRAK 247
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K EF+IIFGEG+S LGC++D AE +I++RKGAWYSY + + QGRD
Sbjct: 248 VKVAKNKIAPPFKIGEFDIIFGEGISTLGCIVDLAEENNILIRKGAWYSYKGENISQGRD 307
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDG 416
A++YL DNP + +IE+ +R + G
Sbjct: 308 NAIRYLSDNPEVSTDIEQKLRQTLQIG 334
>gi|428315843|ref|YP_007113725.1| Protein recA [Oscillatoria nigro-viridis PCC 7112]
gi|428239523|gb|AFZ05309.1| Protein recA [Oscillatoria nigro-viridis PCC 7112]
Length = 379
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 196/329 (59%), Positives = 261/329 (79%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL + ++ I SFGKG++ RLG + VET P+G LTLD+ALGGGLPKGR++EI+
Sbjct: 16 EKQKALTSVLSQIERSFGKGAIVRLGDSTRMRVETIPTGALTLDIALGGGLPKGRVIEIY 75
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 76 GPESSGKTTLALHAIAEVQKSGGIAAFVDAEHALDPTYASALGVDIENLLVSQPDTGEMA 135
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 136 LEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 195
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G R +
Sbjct: 196 GCTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEYGNRTK 253
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S LGC+ D A+ M ++++KG+WYSY + + QGRD
Sbjct: 254 VKVAKNKVAPPFRIAEFDIVFGKGISTLGCLTDLADEMGVIIKKGSWYSYNGENIAQGRD 313
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
K +Q++ N + EIE++V+ + G+V
Sbjct: 314 KVIQHMEKNADFKNEIEQLVKKKLETGAV 342
>gi|33863994|ref|NP_895554.1| recombinase A [Prochlorococcus marinus str. MIT 9313]
gi|50403572|sp|Q7V547.1|RECA_PROMM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|33635578|emb|CAE21902.1| RecA bacterial DNA recombination protein [Prochlorococcus marinus
str. MIT 9313]
Length = 379
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 256/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VETFP+G LTLDLALGGG PKGR+VE++
Sbjct: 24 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRVVEVY 83
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +LGVD+ENL+V QPD GEMA
Sbjct: 84 GPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPDTGEMA 143
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 144 LEIVDQLVRSAAVDIVVVDSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 203
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 204 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 261
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGAWYSY +GQGRD
Sbjct: 262 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGRD 321
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L N QE+IE +VR +++GS
Sbjct: 322 NTITWLEQNSEAQEQIEVLVRQKLTEGS 349
>gi|124023990|ref|YP_001018297.1| recombinase A [Prochlorococcus marinus str. MIT 9303]
gi|166220665|sp|A2CC22.1|RECA_PROM3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123964276|gb|ABM79032.1| RecA bacterial DNA recombination protein [Prochlorococcus marinus
str. MIT 9303]
Length = 379
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 256/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VETFP+G LTLDLALGGG PKGR+VE++
Sbjct: 24 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRVVEVY 83
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +LGVD+ENL+V QPD GEMA
Sbjct: 84 GPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPDTGEMA 143
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 144 LEIVDQLVRSAAVDIVVVDSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 203
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 204 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 261
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGAWYSY +GQGRD
Sbjct: 262 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGRD 321
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L N QE+IE +VR +++GS
Sbjct: 322 NTITWLEQNSEAQEQIEVLVRQKLTEGS 349
>gi|87300918|ref|ZP_01083760.1| recombinase A [Synechococcus sp. WH 5701]
gi|87284789|gb|EAQ76741.1| recombinase A [Synechococcus sp. WH 5701]
Length = 399
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 255/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VET P+G LTLDLALGGG PKGR+VE++
Sbjct: 27 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETMPTGALTLDLALGGGYPKGRVVEVY 86
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE Q+ GG A VDAEHA DP Y+ ALGVDVENL+V QPD GEMA
Sbjct: 87 GPESSGKTTLTLHAIAEAQRRGGVAAFVDAEHALDPVYAAALGVDVENLLVSQPDTGEMA 146
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 147 LEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 206
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 207 GCTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 264
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC++D AE +V+RKGAWYSYG +GQGRD
Sbjct: 265 VKVAKNKVAPPFRIAEFDILFGRGISTLGCVIDLAEETGVVIRKGAWYSYGGDNIGQGRD 324
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L NP +E+IE VR +++G+
Sbjct: 325 NTINWLEQNPEQKEQIEAEVRRRLTEGA 352
>gi|359458113|ref|ZP_09246676.1| recombinase A [Acaryochloris sp. CCMEE 5410]
Length = 352
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/328 (60%), Positives = 258/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+ALD M ++ +FGKGS+ RLG A +ET +G LTLDLALGGGLP+GR++EI+
Sbjct: 9 EKQKALDLVMKNVERTFGKGSIMRLGDATRMQIETISTGALTLDLALGGGLPRGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHAIAE+QK GG A VDAEHA DP Y+ ALGVDV L+VCQPD+GEMA
Sbjct: 69 GPESSGKTTVALHAIAEIQKTGGVAAFVDAEHALDPVYAAALGVDVSELLVCQPDSGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LE+ D++ RS A+DL+ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK++ N SK+
Sbjct: 129 LEVVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKITSNISKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG + G+R +
Sbjct: 189 GSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGTDMFGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S +GC++D AE D++VRKGAWYSY +GQGR+
Sbjct: 247 VKVAKNKVAPPFRIAEFDILFGQGISTVGCLVDMAEETDVIVRKGAWYSYDGNNIGQGRE 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+QY DNP E IE+ VR + G+
Sbjct: 307 NTIQYFIDNPEFAESIEQQVRQKLELGA 334
>gi|113476296|ref|YP_722357.1| recombinase A [Trichodesmium erythraeum IMS101]
gi|123056586|sp|Q111E0.1|RECA_TRIEI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|110167344|gb|ABG51884.1| RecA protein [Trichodesmium erythraeum IMS101]
Length = 360
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/329 (60%), Positives = 256/329 (77%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+ALD+ + I +FGKGS+ RLG A VET SG LTLDLALGGGLPKGR++EI+
Sbjct: 9 EKQKALDSVLKTIEKTFGKGSIVRLGDATRMKVETISSGALTLDLALGGGLPKGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE QK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 69 GPESSGKTTLALHAIAETQKSGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LE+ D + RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 129 LEVVDHLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT++FLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR T +K K E+ G+ +
Sbjct: 189 GCTVVFLNQLRQKIGVVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KSSEEYGIHAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE D++ RKGAWYSY QGR+
Sbjct: 247 VKVAKNKVAPPFRVAEFDIIFGKGISNVGCIIDLAEETDVIKRKGAWYSYQGSNFAQGRE 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
KA+ Y+ N ++IEK VR +S G++
Sbjct: 307 KAIAYMESNIDFAKKIEKQVRDHLSQGAL 335
>gi|33241165|ref|NP_876107.1| recombinase A [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|60393014|sp|Q7V9V8.1|RECA_PROMA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|33238695|gb|AAQ00760.1| RecA recombinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 379
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/333 (60%), Positives = 259/333 (77%), Gaps = 2/333 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144
++R +R +AL + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR
Sbjct: 19 EARSGERDKALSLVLGQIERNFGKGSIMRLGDASKMRVETISTGALTLDLALGGGYPKGR 78
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVD+ENL+V QPD
Sbjct: 79 VVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPD 138
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GEMALEI D++ RS A+DL+ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++G
Sbjct: 139 TGEMALEIVDQLIRSSAVDLVVVDSVAALTPRSEIEGEMGDHAVGSQARLMSQAMRKITG 198
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
N K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+
Sbjct: 199 NIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEY 256
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G+R +V+V K+KV+ P++ AEF+I+FG+G+S LGC+LD AE +IV RKGAWYSY +
Sbjct: 257 GIRAKVKVAKNKVAPPFRIAEFDILFGKGISTLGCLLDMAEETNIVTRKGAWYSYEGDNI 316
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
GQGRD + +L +N +E+IEK+VR +++GS
Sbjct: 317 GQGRDNTITWLEENSEAKEKIEKLVRQKLTEGS 349
>gi|194477062|ref|YP_002049241.1| recombinase A [Paulinella chromatophora]
gi|171192069|gb|ACB43031.1| recombinase A [Paulinella chromatophora]
Length = 367
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/333 (60%), Positives = 259/333 (77%), Gaps = 2/333 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144
DS +R +AL + ++ I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR
Sbjct: 9 DSHVENRDKALSSVLSQIERNFGKGSIMRLGDATRMRVETISTGALTLDLALGGGYPKGR 68
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
+VEI+GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ ALGVD+ENL++ QPD
Sbjct: 69 VVEIYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAAALGVDIENLLISQPD 128
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GEMALEI D++ RSGAID++ +DSV+ALTPRAEIEGE+G +G QARLMSQA+RK++G
Sbjct: 129 TGEMALEIVDQLVRSGAIDIVVIDSVAALTPRAEIEGEMGDVAMGSQARLMSQAMRKITG 188
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
N K+GCT+IFLNQ+R KIGV YGNPE TSGG ALKF+ASVRL+IR + +K +G E+
Sbjct: 189 NIGKSGCTVIFLNQLRLKIGVTYGNPETTSGGNALKFYASVRLDIRRSQTLK--RGTEEY 246
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGAWYSY + +
Sbjct: 247 GIRAKVKVAKNKVAPPFRVAEFDILFGSGISTLGCLLDLAEETGVVIRKGAWYSYEGENI 306
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
GQGRD + +L NP + IE ++R +++G+
Sbjct: 307 GQGRDNTISWLEHNPESLKVIETIIRKKITEGN 339
>gi|428773807|ref|YP_007165595.1| recombinase A [Cyanobacterium stanieri PCC 7202]
gi|428688086|gb|AFZ47946.1| RecA protein [Cyanobacterium stanieri PCC 7202]
Length = 354
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/334 (60%), Positives = 263/334 (78%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR++AL+ ++ I +FGKG++ RLG A VET SG LTLDLALGGGLPKGRI+EI+
Sbjct: 11 DREKALNLVLSQIERNFGKGAIMRLGDAAKMKVETISSGALTLDLALGGGLPKGRIIEIY 70
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD++NL+V QPDNGE A
Sbjct: 71 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPNYSSALGVDIDNLLVAQPDNGESA 130
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 131 LEIVDQLVRSAAVDLVVIDSVAALVPRAEIEGEMGDLQVGLQARLMSKALRKIAGNIGKS 190
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK--GDEDVGVR 327
G T+IFLNQ+R KIG+ YG+PEVT+GG ALKF+ASVRL+IR +I+++K D + G+R
Sbjct: 191 GSTVIFLNQLRQKIGISYGSPEVTTGGTALKFYASVRLDIR---RIQTLKKGSDGEYGIR 247
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
+V+V K+KV+ P++ AEF+IIFG G+S+ GC+LD AE D+V RKGAWYSY + QG
Sbjct: 248 AKVKVAKNKVAPPFRIAEFDIIFGSGISRTGCLLDLAEKTDVVTRKGAWYSYEGDNIAQG 307
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQG 421
RD A++YL +NP L + +E+ V+ + +V G
Sbjct: 308 RDNAVKYLEENPELAQIVEQKVKENLEINNVSFG 341
>gi|159904222|ref|YP_001551566.1| recombinase A [Prochlorococcus marinus str. MIT 9211]
gi|238687121|sp|A9BCQ0.1|RECA_PROM4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|159889398|gb|ABX09612.1| RecA bacterial DNA recombination protein [Prochlorococcus marinus
str. MIT 9211]
Length = 367
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 272/364 (74%), Gaps = 7/364 (1%)
Query: 75 KVNGFSSDSGDSRFL-----DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGC 129
+VN S + +SR +R +AL+ + I +FGKGS+ RLG A VET +G
Sbjct: 4 EVNANQSPNAESRQEAARSGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGA 63
Query: 130 LTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSK 189
LTLDLALGGG PKGR+VE++GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+
Sbjct: 64 LTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAA 123
Query: 190 ALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIG 249
+LGVDVENL+V QPD GEMALEI D++ RS A++L+ VDSV+ALTPRAEIEGE+G IG
Sbjct: 124 SLGVDVENLLVSQPDTGEMALEIVDQLIRSAAVELVVVDSVAALTPRAEIEGEMGDHVIG 183
Query: 250 LQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEI 309
QARLMSQA+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+I
Sbjct: 184 SQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDI 243
Query: 310 RSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDI 369
R +K +G ++ G+R +V+V K+KV+ P++ AEF+I+FG+G+S +GC+LD AE +I
Sbjct: 244 RRIQTLK--RGTDEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTIGCLLDLAEETNI 301
Query: 370 VVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSL 429
V RKGAWYSY +GQGRD + +L N +E+IEK+VR +++GS + +R ++
Sbjct: 302 VARKGAWYSYEGDNIGQGRDNTITWLEQNTEAKEKIEKLVRQKLTEGSEVSSNSMRPLTT 361
Query: 430 PNQE 433
N++
Sbjct: 362 ANRK 365
>gi|428769491|ref|YP_007161281.1| recombinase A [Cyanobacterium aponinum PCC 10605]
gi|428683770|gb|AFZ53237.1| RecA protein [Cyanobacterium aponinum PCC 10605]
Length = 356
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/330 (62%), Positives = 261/330 (79%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I SFGKGS+ RLG A VET SG LTLDLALGGGLPKGRI+EI+
Sbjct: 11 DKEKALNLVLNQIERSFGKGSIMRLGDAAKMKVETISSGALTLDLALGGGLPKGRIIEIY 70
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD++NL+V QPDNGE A
Sbjct: 71 GPESSGKTTLALHAIAEVQKAGGIAAFVDAEHALDPTYSAALGVDIDNLLVAQPDNGESA 130
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 131 LEIVDQLVRSSAVDIVVVDSVAALVPRAEIEGEMGDLQVGLQARLMSKALRKVAGNIGKS 190
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
G T+IFLNQ+R KIG+ YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 191 GATVIFLNQLRQKIGISYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 248
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG G+S++GC+LD AE +IV RKGAWYSY + QGR
Sbjct: 249 KVKVAKNKVAPPFRIAEFDIIFGSGISRIGCLLDLAEKTNIVNRKGAWYSYEGDNIAQGR 308
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL +N + E IE+ V++ + +V
Sbjct: 309 DNAVKYLEENLEIAEAIEEKVKAELEINNV 338
>gi|428781107|ref|YP_007172893.1| protein RecA [Dactylococcopsis salina PCC 8305]
gi|428695386|gb|AFZ51536.1| protein RecA [Dactylococcopsis salina PCC 8305]
Length = 365
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/351 (59%), Positives = 264/351 (75%), Gaps = 4/351 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I +FGKG++ RLG A VET P+G TLD+ALGGGLPKGRI+EI+
Sbjct: 12 DKEKALNLVLNQIERNFGKGAIMRLGDAAQMKVETIPTGAHTLDIALGGGLPKGRIIEIY 71
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE QK GG A VDAEHA DP+YS ALGVD+ENL+V QPD GE A
Sbjct: 72 GPESSGKTTLALHAIAEAQKGGGVAAFVDAEHALDPTYSDALGVDIENLLVSQPDTGESA 131
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 132 LEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 191
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GCT+IFLNQ+R KIGV YG+PEVT+GG ALKF+ SVRL+IR +K KG E + G+R
Sbjct: 192 GCTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYCSVRLDIRRIQTLK--KGSEGEYGIRA 249
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG G+S+LGC++D AE D++ RKGAWYSY + QGR
Sbjct: 250 KVKVAKNKVAPPFRIAEFDIIFGHGISQLGCLVDIAEQTDVINRKGAWYSYQGDNIAQGR 309
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGS-VHQGSFLRNVSLPNQEENILE 438
D ++YL +NP EIE V + G+ V S S N + N LE
Sbjct: 310 DNTIKYLEENPEKVAEIEAAVHEKIEMGALVPANSATNKKSKKNNDANELE 360
>gi|318042569|ref|ZP_07974525.1| recombinase A [Synechococcus sp. CB0101]
Length = 375
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/328 (61%), Positives = 255/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL +N I +FGKGS+ RLG A +ET P+G LTLDLALGGG PKGR+VEI+
Sbjct: 20 ERDKALGLVLNQIERNFGKGSIMRLGDASRMRIETSPTGALTLDLALGGGYPKGRVVEIY 79
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 80 GPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAAALGVDIENLLVSQPDTGEMA 139
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 140 LEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 199
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 200 GCTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 257
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S +GC+LD AE +VVRKGAWYSY +GQGRD
Sbjct: 258 VKVAKNKVAPPFRIAEFDILFGRGISTVGCLLDLAEENGVVVRKGAWYSYEGDNIGQGRD 317
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L NP +E+IE+ VR +S+ S
Sbjct: 318 NTITWLEQNPEPKEQIERQVREKLSETS 345
>gi|428775088|ref|YP_007166875.1| recombinase A [Halothece sp. PCC 7418]
gi|428689367|gb|AFZ42661.1| RecA protein [Halothece sp. PCC 7418]
Length = 367
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/334 (60%), Positives = 259/334 (77%), Gaps = 3/334 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I +FGKGS+ RLG A VET P+G TLD+ALGGGLPKGRI+EI+
Sbjct: 12 DKEKALNLVLNQIERNFGKGSIMRLGDAAQMKVETIPTGAHTLDIALGGGLPKGRIIEIY 71
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE QK GG A VDAEHA DP+YS LGVD+ENL+V QPD GE A
Sbjct: 72 GPESSGKTTLALHAIAEAQKAGGVAAFVDAEHALDPTYSDVLGVDIENLLVSQPDTGESA 131
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G Q+GLQARLMS+ALRK++GN ++
Sbjct: 132 LEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGRS 191
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GCT+IFLNQ+R KIGV YG+PEVT+GG ALKF+ SVRL+IR +K KG E + G+R
Sbjct: 192 GCTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYCSVRLDIRRIQTLK--KGSEGEYGIRA 249
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S+LGC++D AE D++ RKGAWYSY + QGR
Sbjct: 250 KVKVAKNKVAPPFRIAEFDIIFGQGISQLGCLVDIAEQTDVINRKGAWYSYQGDNIAQGR 309
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
D ++YL +NP EIE V + G++ Q +
Sbjct: 310 DNTIKYLEENPEKVAEIEAAVHEKIEMGALVQAN 343
>gi|145351664|ref|XP_001420188.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580421|gb|ABO98481.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 369
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 266/332 (80%)
Query: 84 GDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKG 143
GD +++AL +++I+S+FG G++ RLG AG A V TFPSG +TLD+ALGGGLP+G
Sbjct: 3 GDGSAEAKKKALARVLDEIDSNFGAGAIMRLGEAGKAKVATFPSGAMTLDIALGGGLPRG 62
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RIVEI+GPESSGKTTLALHA+AE+QKLGG ++DAEHAFDP YS+ LG++V+++IVCQP
Sbjct: 63 RIVEIYGPESSGKTTLALHAMAEMQKLGGTVAMIDAEHAFDPEYSQRLGLNVDDVIVCQP 122
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
+ GEMALE+ D + RS A+DLICVDSV+AL PR+EIEGEIGM Q+G ARLMSQALRK++
Sbjct: 123 ETGEMALEVVDTLVRSSAVDLICVDSVAALVPRSEIEGEIGMVQVGAHARLMSQALRKIN 182
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
NA+KAG T+IFLNQ+R K+GV YG+PEVT+GG ALK+++SVRL+IR IK G++D
Sbjct: 183 VNAAKAGTTIIFLNQLRSKVGVIYGSPEVTTGGNALKYYSSVRLDIRRKEVIKGKAGEDD 242
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
GVR +V+V K+KV+ PYK AEF+++FG GVS+ GCMLD E + + RKGA+Y + ++
Sbjct: 243 TGVRCKVKVAKNKVAPPYKIAEFDMLFGRGVSRDGCMLDAGEQVGTIERKGAYYYFNGEK 302
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVRSMMSD 415
LGQGR+K L +L +NP ++ IE VR+ +++
Sbjct: 303 LGQGREKTLSFLDENPEMKATIETDVRARLAE 334
>gi|87124957|ref|ZP_01080804.1| RecA bacterial DNA recombination protein [Synechococcus sp. RS9917]
gi|86167277|gb|EAQ68537.1| RecA bacterial DNA recombination protein [Synechococcus sp. RS9917]
Length = 396
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/341 (58%), Positives = 260/341 (76%), Gaps = 2/341 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144
D R +R +AL+ + I +FGKGS+ RLG A VET P+G LTLDLALGGG PKGR
Sbjct: 10 DPRPGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETIPTGALTLDLALGGGYPKGR 69
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
+VE++GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +LGVD+ENL+V QPD
Sbjct: 70 VVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPD 129
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GEMALEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARLMSQA+RK++G
Sbjct: 130 TGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGSQARLMSQAMRKITG 189
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
N K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+
Sbjct: 190 NIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEY 247
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGAWYSY +
Sbjct: 248 GIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNI 307
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
GQGRD + +L NP ++ IE +VR +++GS + +R
Sbjct: 308 GQGRDNTIGWLEQNPDAKDAIEALVRQKLTEGSEVTANSMR 348
>gi|334118784|ref|ZP_08492872.1| Protein recA [Microcoleus vaginatus FGP-2]
gi|333459014|gb|EGK87629.1| Protein recA [Microcoleus vaginatus FGP-2]
Length = 374
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/329 (59%), Positives = 259/329 (78%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL + ++ I SFGKG++ RLG + VET P+G LTLD+ALGGGLPKGR++EI+
Sbjct: 16 EKQKALTSVLSQIERSFGKGAIVRLGDSTRMRVETIPTGALTLDIALGGGLPKGRVIEIY 75
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 76 GPESSGKTTLALHAIAEVQKSGGIAAFVDAEHALDPTYASALGVDIENLLVSQPDTGEMA 135
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 136 LEIVDQLVRSVAVDIVVIDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 195
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G R +
Sbjct: 196 GCTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRIQSLK--KGTEEYGNRTK 253
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S LGC+ D A+ M ++ +KG+WYSY + QGRD
Sbjct: 254 VKVAKNKVAPPFRIAEFDIVFGKGISTLGCLTDLADEMGVITKKGSWYSYKGDNIAQGRD 313
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
++++ +N + EIEK+VR + G+V
Sbjct: 314 NVIRHMEENTEFKNEIEKLVREQLDTGAV 342
>gi|411117445|ref|ZP_11389932.1| protein RecA [Oscillatoriales cyanobacterium JSC-12]
gi|410713548|gb|EKQ71049.1| protein RecA [Oscillatoriales cyanobacterium JSC-12]
Length = 366
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/329 (60%), Positives = 260/329 (79%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL+ + I +FGKGS+ RLG A VET P+G LTLDLALGGGLPKGR++EI+
Sbjct: 16 EKKKALNLVVTQIERNFGKGSIMRLGDATRMKVETIPTGALTLDLALGGGLPKGRVIEIY 75
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA+AEVQK GG A VDAEHA DPSY+ ALGVD++NL+V QPD GE A
Sbjct: 76 GPESSGKTTLALHAVAEVQKSGGIAAFVDAEHALDPSYASALGVDIDNLLVSQPDTGEAA 135
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN K+
Sbjct: 136 LEIVDQLVRSTAVDIIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKIAGNMGKS 195
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG ++ G R +
Sbjct: 196 GCTVIFLNQLRQKIGVTYGNPETTTGGQALKFYASVRLDIRRIQTLK--KGTDEYGNRAK 253
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S LGC++D AE ++VRKGAWYSY + QGRD
Sbjct: 254 VKVAKNKVAPPFRIAEFDIIFGKGISSLGCLVDLAEETGVIVRKGAWYSYNGDNIAQGRD 313
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P L++++++ VR + G+V
Sbjct: 314 NAIKYLEERPELRQKVDQEVRQKLEMGAV 342
>gi|78211933|ref|YP_380712.1| recombinase A [Synechococcus sp. CC9605]
gi|123770811|sp|Q3AMM5.1|RECA_SYNSC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|78196392|gb|ABB34157.1| recA protein [Synechococcus sp. CC9605]
Length = 374
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/336 (60%), Positives = 257/336 (76%), Gaps = 2/336 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VEI+
Sbjct: 17 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIY 76
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 77 GPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 136
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 137 LEIVDQLVRSAAVDLVVVDSVAALTPRAEIEGEMGDLAVGAQARLMSQAMRKITGNIGKS 196
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 197 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 254
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +VVRKGAWYSY +GQGRD
Sbjct: 255 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVVRKGAWYSYEGDNIGQGRD 314
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
+ ++ +NP IE +VR +++GS + + +R
Sbjct: 315 NTISWMEENPDATATIETLVRQKLTEGSEVKANSMR 350
>gi|352096526|ref|ZP_08957353.1| Protein recA [Synechococcus sp. WH 8016]
gi|351676176|gb|EHA59330.1| Protein recA [Synechococcus sp. WH 8016]
Length = 382
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/350 (58%), Positives = 261/350 (74%), Gaps = 2/350 (0%)
Query: 76 VNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLA 135
V S G+ R ++ +ALD + I +FGKGS+ RLG A VET +G LTLDLA
Sbjct: 5 VKAAQSSQGNPRPGEKDKALDLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLA 64
Query: 136 LGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDV 195
LGGG PKGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVD+
Sbjct: 65 LGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDI 124
Query: 196 ENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLM 255
ENL+V QPD GEMALEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARLM
Sbjct: 125 ENLLVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGAQARLM 184
Query: 256 SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKI 315
SQA+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +
Sbjct: 185 SQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTL 244
Query: 316 KSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGA 375
K +G E+ G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V RKGA
Sbjct: 245 K--RGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCVLDLAEETGVVTRKGA 302
Query: 376 WYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
WYSY +GQGRD + +L NP +E IE +VR +++GS + +R
Sbjct: 303 WYSYEGDNIGQGRDNTIGWLEQNPDAKEAIEVLVRQKLTEGSEVTANSMR 352
>gi|260434418|ref|ZP_05788388.1| protein RecA [Synechococcus sp. WH 8109]
gi|260412292|gb|EEX05588.1| protein RecA [Synechococcus sp. WH 8109]
Length = 370
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/336 (60%), Positives = 257/336 (76%), Gaps = 2/336 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VEI+
Sbjct: 13 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIY 72
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 73 GPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 132
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 133 LEIVDQLVRSAAVDLVVVDSVAALTPRAEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 192
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 193 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 250
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +VVRKGAWYSY +GQGRD
Sbjct: 251 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVVRKGAWYSYEGDNIGQGRD 310
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
+ ++ +NP IE +VR +++GS + + +R
Sbjct: 311 NTISWMEENPDATATIETLVRQKLTEGSEVKANSMR 346
>gi|427703063|ref|YP_007046285.1| protein RecA [Cyanobium gracile PCC 6307]
gi|427346231|gb|AFY28944.1| protein RecA [Cyanobium gracile PCC 6307]
Length = 402
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/339 (60%), Positives = 258/339 (76%), Gaps = 3/339 (0%)
Query: 80 SSDSGDSRFL-DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGG 138
++ SGD R +R +AL + I +FGKGS+ RLG A VET P+G LTLDLALGG
Sbjct: 27 AAPSGDPRAAAERDKALGLVLTQIERNFGKGSIMRLGDASRMRVETVPTGALTLDLALGG 86
Query: 139 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENL 198
G PKGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ ALGVD+ENL
Sbjct: 87 GYPKGRVVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAAALGVDIENL 146
Query: 199 IVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 258
+V QPD GEMALEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARLMSQA
Sbjct: 147 LVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGSQARLMSQA 206
Query: 259 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318
+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K
Sbjct: 207 MRKITGNIGKSGCTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK-- 264
Query: 319 KGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYS 378
+G E+ G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V RKGAWYS
Sbjct: 265 RGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVSRKGAWYS 324
Query: 379 YGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
Y +GQGRD + +L NP +E IE + R +++GS
Sbjct: 325 YEGDNIGQGRDNTIAWLEQNPGPKEVIETLTRQKLTEGS 363
>gi|443475343|ref|ZP_21065296.1| Protein recA [Pseudanabaena biceps PCC 7429]
gi|443019865|gb|ELS33899.1| Protein recA [Pseudanabaena biceps PCC 7429]
Length = 380
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/327 (59%), Positives = 253/327 (77%), Gaps = 2/327 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++ALDA M I GKGS+ RLG A VET PSG L LDLALGGGLPKGR++E++
Sbjct: 31 EKKKALDAIMQKIEKDHGKGSIMRLGDATNMRVETIPSGALPLDLALGGGLPKGRVIEVY 90
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP+Y+ ++GVD+ NL++ QPD+GEMA
Sbjct: 91 GPESSGKTTLVLHAIAEVQKRGGVAAFVDAEHALDPTYAASVGVDINNLLISQPDSGEMA 150
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D + RS A+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ N ++
Sbjct: 151 LEIVDNLVRSMAVDIIAIDSVAALVPRAEIEGEMGASHVGLQARLMSQALRKITANVGRS 210
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
C +IFLNQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 211 NCIVIFLNQLRQKIGVSYGSPETTTGGTALKFYASVRLDIRRIQTLK--KGTEEYGIRAK 268
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE M I+VRKGAWYSY +GQGRD
Sbjct: 269 VKVAKNKVAPPFRIAEFDIIFGKGISTVGCLVDLAEEMSIIVRKGAWYSYQGDNIGQGRD 328
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDG 416
++Y+ D P +++E+ VR +S G
Sbjct: 329 NTIKYMEDKPEFAQDVERQVREKLSAG 355
>gi|88807878|ref|ZP_01123389.1| recombinase A [Synechococcus sp. WH 7805]
gi|88787917|gb|EAR19073.1| recombinase A [Synechococcus sp. WH 7805]
Length = 382
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/343 (58%), Positives = 259/343 (75%), Gaps = 2/343 (0%)
Query: 75 KVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDL 134
+V S GD R +R +AL+ + I +FGKGS+ RLG A VET +G LTLDL
Sbjct: 4 EVKASQSSGGDVRPGERDQALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDL 63
Query: 135 ALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVD 194
ALGGG PKGR+VE++GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +LGVD
Sbjct: 64 ALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVD 123
Query: 195 VENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARL 254
+ENL+V QPD GEMALEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARL
Sbjct: 124 IENLLVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGAQARL 183
Query: 255 MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGK 314
MSQA+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR
Sbjct: 184 MSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQT 243
Query: 315 IKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKG 374
+K +G E+ G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V RKG
Sbjct: 244 LK--RGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVTRKG 301
Query: 375 AWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
AWYSY +GQGRD + +L NP ++ IE +VR +++GS
Sbjct: 302 AWYSYEGDNIGQGRDNTIGWLEQNPDAKDTIETLVRQKLTEGS 344
>gi|148238775|ref|YP_001224162.1| recombinase A [Synechococcus sp. WH 7803]
gi|166220689|sp|A5GIV0.1|RECA_SYNPW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|147847314|emb|CAK22865.1| RecA protein (recombinase A) [Synechococcus sp. WH 7803]
Length = 382
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/343 (58%), Positives = 259/343 (75%), Gaps = 2/343 (0%)
Query: 75 KVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDL 134
+V S GD R +R +AL+ + I +FGKGS+ RLG A VET +G LTLDL
Sbjct: 4 EVKSSQSSGGDVRPGERDQALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDL 63
Query: 135 ALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVD 194
ALGGG PKGR+VE++GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +LGVD
Sbjct: 64 ALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVD 123
Query: 195 VENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARL 254
+ENL+V QPD GEMALEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARL
Sbjct: 124 IENLLVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGSQARL 183
Query: 255 MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGK 314
MSQA+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR
Sbjct: 184 MSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQT 243
Query: 315 IKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKG 374
+K +G E+ G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V RKG
Sbjct: 244 LK--RGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVTRKG 301
Query: 375 AWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
AWYSY +GQGRD + +L NP ++ IE +VR +++GS
Sbjct: 302 AWYSYEGDNIGQGRDNTIGWLEQNPEAKDTIETLVRQKLTEGS 344
>gi|428312659|ref|YP_007123636.1| protein RecA [Microcoleus sp. PCC 7113]
gi|428254271|gb|AFZ20230.1| protein RecA [Microcoleus sp. PCC 7113]
Length = 358
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/334 (59%), Positives = 259/334 (77%), Gaps = 3/334 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I +FGKGS+ RLG A VET +G +TLDLALGGGLPKGR++EI+
Sbjct: 10 DKEKALNLVLNQIERTFGKGSIMRLGDATRMKVETISTGAITLDLALGGGLPKGRVIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA+AEVQK GG A VDAEHA DP+YS ALGVD+ NL+V QPDNGE A
Sbjct: 70 GPESSGKTTLALHAVAEVQKAGGVAAFVDAEHALDPTYSAALGVDIANLLVSQPDNGEAA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 130 LEIVDQLVRSSAVDIVIIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKVAGNIGKS 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GCT+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 190 GCTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 247
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG G+S+LGC++D AE ++ RKGAWYSY + QGR
Sbjct: 248 KVKVAKNKVAPPFRIAEFDIIFGSGISRLGCLVDLAEQTGVITRKGAWYSYNGDNIAQGR 307
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
D ++YL +N ++K VR + G+V Q +
Sbjct: 308 DNTVKYLEENAEFAANVDKQVREKLDMGAVVQAN 341
>gi|170077054|ref|YP_001733692.1| recombinase A [Synechococcus sp. PCC 7002]
gi|132240|sp|P14582.1|RECA_SYNP2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|154602|gb|AAA88636.1| recA [Synechococcus sp.]
gi|169884723|gb|ACA98436.1| recA protein (recombinase A) [Synechococcus sp. PCC 7002]
Length = 348
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/322 (61%), Positives = 256/322 (79%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I +FGKG++ RLG A V T PSG LTLD A+GGG P+GRIVEI+
Sbjct: 9 DKEKALNLVLNQIERNFGKGAIMRLGDAAQMKVATIPSGALTLDQAMGGGFPRGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP+YS ALGVD+ENL+V QPDNGE A
Sbjct: 69 GPESSGKTTVALHAIAEVQKAGGVAAFIDAEHALDPTYSAALGVDIENLLVAQPDNGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD++ RS A+DLI +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN ++
Sbjct: 129 LEIADQLVRSAAVDLIVIDSVAALVPRAEIEGEMGDVQVGLQARLMSKALRKIAGNMGRS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GCT+IFLNQ+R KIG+ YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCTVIFLNQLRQKIGISYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEFGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++ RKGAWYSY + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISRVGCMLDLAEQTGVITRKGAWYSYEGDNIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
D A++YL +NP + + + VR
Sbjct: 307 DNAVKYLEENPDVAAIVTQKVR 328
>gi|72382971|ref|YP_292326.1| recombinase A [Prochlorococcus marinus str. NATL2A]
gi|123746243|sp|Q46IQ5.1|RECA_PROMT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|72002821|gb|AAZ58623.1| RecA protein [Prochlorococcus marinus str. NATL2A]
Length = 377
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 262/341 (76%), Gaps = 2/341 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144
D++ ++++AL + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR
Sbjct: 17 DAKSGEKEKALSLVVGQIERNFGKGSIMRLGDASKMRVETISTGALTLDLALGGGYPKGR 76
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
++E++GPESSGKTTL LHAIAE+Q+ GG A VDAEHA DP Y+ +LGVDVENL+V QPD
Sbjct: 77 VIEVYGPESSGKTTLTLHAIAEIQRNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPD 136
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GEMALEI D++ RS A+DL+ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++G
Sbjct: 137 TGEMALEIVDQLIRSAAVDLVVVDSVAALTPRSEIEGEMGDHSVGAQARLMSQAMRKITG 196
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
N K+GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR +K +G E+
Sbjct: 197 NIGKSGCTVIFLNQLRLKIGITYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEY 254
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G+R +V+V K+KV+ P++ AEF+I+FG+G+S LGC+LD A+ ++V RKGAWYSY +
Sbjct: 255 GIRAKVKVAKNKVAPPFRIAEFDILFGKGISTLGCLLDLADETNVVTRKGAWYSYEGDNI 314
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
GQGRD + +L NP +E IEK+V+ +++GS + +R
Sbjct: 315 GQGRDNTITWLEQNPESKEIIEKLVKEKLTEGSEVSANSMR 355
>gi|124026712|ref|YP_001015827.1| recombinase A [Prochlorococcus marinus str. NATL1A]
gi|166220664|sp|A2C503.1|RECA_PROM1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123961780|gb|ABM76563.1| RecA bacterial DNA recombination protein [Prochlorococcus marinus
str. NATL1A]
Length = 377
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 262/341 (76%), Gaps = 2/341 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144
D++ ++++AL + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR
Sbjct: 17 DAKSGEKEKALSLVVGQIERNFGKGSIMRLGDASKMRVETISTGALTLDLALGGGYPKGR 76
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
++E++GPESSGKTTL LHAIAE+Q+ GG A VDAEHA DP Y+ +LGVDVENL+V QPD
Sbjct: 77 VIEVYGPESSGKTTLTLHAIAEIQRNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPD 136
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GEMALEI D++ RS A+DL+ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++G
Sbjct: 137 TGEMALEIVDQLIRSAAVDLVVVDSVAALTPRSEIEGEMGDHSVGAQARLMSQAMRKITG 196
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
N K+GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR +K +G E+
Sbjct: 197 NIGKSGCTVIFLNQLRLKIGITYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEY 254
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G+R +V+V K+KV+ P++ AEF+I+FG+G+S LGC+LD A+ ++V RKGAWYSY +
Sbjct: 255 GIRAKVKVAKNKVAPPFRIAEFDILFGKGISTLGCLLDLADETNVVTRKGAWYSYEGDNI 314
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
GQGRD + +L NP +E IEK+V+ +++GS + +R
Sbjct: 315 GQGRDNTITWLEQNPESKEIIEKLVKEKLTEGSEVSANSMR 355
>gi|427723071|ref|YP_007070348.1| recombinase A [Leptolyngbya sp. PCC 7376]
gi|427354791|gb|AFY37514.1| RecA protein [Leptolyngbya sp. PCC 7376]
Length = 372
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/322 (62%), Positives = 255/322 (79%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I +FGKG++ RLG A VET PSG LTLDLA+GGG PKGRIVEI+
Sbjct: 9 DKEKALNLVLNQIERNFGKGAIMRLGDAARMRVETIPSGALTLDLAMGGGFPKGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHAIAEVQK GG A VDAEHA DP+YS ALGVD+ NL+V QPDNGE A
Sbjct: 69 GPESSGKTTVALHAIAEVQKAGGVAAFVDAEHALDPTYSAALGVDIGNLLVAQPDNGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DLI +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN ++
Sbjct: 129 LEITDQLVRSAAVDLIVIDSVAALVPRAEIEGEMGDIQVGLQARLMSKALRKIAGNMGRS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GCT+IFLNQ+R KIG+ YG+PEVT+GG ALKF+ASVRL+IR +K KG + + G+R
Sbjct: 189 GCTVIFLNQLRQKIGISYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGAQGEFGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S +GCMLD AE IV RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISGVGCMLDLAEQTGIVNRKGAWYSYEGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
D A++Y +NP + + K VR
Sbjct: 307 DNAVKYFEENPEIANVVHKKVR 328
>gi|359463013|ref|ZP_09251576.1| recombinase A [Acaryochloris sp. CCMEE 5410]
Length = 357
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/355 (55%), Positives = 266/355 (74%), Gaps = 3/355 (0%)
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
S + ++Q+ALD M ++ +FGKG++ RLG A +ET SG LTLDLALGGGLP+
Sbjct: 2 SAKNEMTEKQKALDLVMKNVEKTFGKGAIMRLGDATRMQIETISSGALTLDLALGGGLPR 61
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR++EI+GPESSGKTT+ALHAI+++QK GG A VDAEHA DP Y+ ALGVD+ L+V Q
Sbjct: 62 GRVIEIYGPESSGKTTVALHAISQIQKTGGVAAFVDAEHALDPVYAAALGVDISELLVSQ 121
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD+GEMALEI D++ RS A+DL+ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK+
Sbjct: 122 PDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKI 181
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ N +K+G T+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG +
Sbjct: 182 TSNIAKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGTD 239
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
G+R +V+V K+KV+ P++ AEF+I+FG+G+S +GC++D AE DI+VRKGAWYSY
Sbjct: 240 MYGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTMGCLVDMAEETDIIVRKGAWYSYDGS 299
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSL-PNQEENI 436
+GQGR+ +QY DNP + +E+ VR + GS + + V + P E +
Sbjct: 300 NIGQGRENTIQYFLDNPEFAQNVEQQVRQKLELGSKVSANSITTVEIEPADTEEV 354
>gi|254430846|ref|ZP_05044549.1| protein RecA [Cyanobium sp. PCC 7001]
gi|197625299|gb|EDY37858.1| protein RecA [Cyanobium sp. PCC 7001]
Length = 419
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/325 (61%), Positives = 251/325 (77%), Gaps = 2/325 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPE 152
+AL +N I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VE++GPE
Sbjct: 48 KALGLVLNQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEVYGPE 107
Query: 153 SSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEI 212
SSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ ALGVD+ENL+V QPD GEMALEI
Sbjct: 108 SSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAAALGVDIENLLVSQPDTGEMALEI 167
Query: 213 ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCT 272
D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARLMSQA+RK++GN K+GCT
Sbjct: 168 VDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGSQARLMSQAMRKITGNIGKSGCT 227
Query: 273 LIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRV 332
+IFLNQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K +G E+ G+R +V+V
Sbjct: 228 VIFLNQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAKVKV 285
Query: 333 QKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKAL 392
K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGAWYSY +GQGRD +
Sbjct: 286 AKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGRDNTI 345
Query: 393 QYLRDNPLLQEEIEKVVRSMMSDGS 417
+L NP EEIE+ R +++GS
Sbjct: 346 TWLEQNPEQAEEIERRTRQKLTEGS 370
>gi|116072570|ref|ZP_01469836.1| recombinase A [Synechococcus sp. BL107]
gi|116064457|gb|EAU70217.1| recombinase A [Synechococcus sp. BL107]
Length = 376
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 252/328 (76%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VEI+
Sbjct: 19 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIY 78
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 79 GPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPHYAASLGVDVENLLVSQPDTGEMA 138
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+ALTPR+EIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 139 LEIVDQLVRSAAVDIVVIDSVAALTPRSEIEGEMGDVSVGSQARLMSQAMRKITGNIGKS 198
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 199 GCTVIFLNQLRLKIGVMYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 256
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +VVRKGAWYSY +GQGRD
Sbjct: 257 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVVRKGAWYSYEGDNIGQGRD 316
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ ++ NP IE +VR +S+G+
Sbjct: 317 NTIVWMEQNPEAATTIETLVRQKLSEGT 344
>gi|33866594|ref|NP_898153.1| recombinase A [Synechococcus sp. WH 8102]
gi|50403570|sp|Q7U4K5.1|RECA_SYNPX RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|33633372|emb|CAE08577.1| RecA bacterial DNA recombination protein [Synechococcus sp. WH
8102]
Length = 375
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 254/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VEI+
Sbjct: 19 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIY 78
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 79 GPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 138
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+ALTPRAEIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 139 LEIVDQLVRSAAVDIVVIDSVAALTPRAEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 198
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 199 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 256
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGAWYSY +GQGRD
Sbjct: 257 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGRD 316
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ ++ +NP IE++VR +++GS
Sbjct: 317 NTITWMEENPEAAITIEQLVRQKLTEGS 344
>gi|158341040|ref|YP_001522207.1| recombinase A [Acaryochloris marina MBIC11017]
gi|158311281|gb|ABW32893.1| protein RecA [Acaryochloris marina MBIC11017]
Length = 357
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/334 (58%), Positives = 259/334 (77%), Gaps = 2/334 (0%)
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
S + ++Q+ALD M ++ +FGKG++ RLG A VET SG LTLDLALGGGLP+
Sbjct: 2 SAKNEMNEKQKALDLVMKNVEKTFGKGAIMRLGDATRMQVETISSGALTLDLALGGGLPR 61
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR++EI+GPESSGKTT+ALHAI+++QK GG A VDAEHA DP Y+ ALGVDV L+V Q
Sbjct: 62 GRVIEIYGPESSGKTTVALHAISQIQKTGGVAAFVDAEHALDPVYAAALGVDVSELLVSQ 121
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD+GEMALEI D++ RS A+DL+ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK+
Sbjct: 122 PDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKI 181
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ N +K+G T+IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG +
Sbjct: 182 TSNIAKSGSTVIFLNQLRQKIGVTYGNPEVTTGGNALKFYASVRLDIRRIQTLK--KGTD 239
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
G+R +V+V K+KV+ P++ AEF+I+FG+G+S +GC++D AE DI+VRKGAWYSY
Sbjct: 240 MYGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTMGCLVDMAEEKDIIVRKGAWYSYDGS 299
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+GQGR+ +QY DNP +++E+ VR + G
Sbjct: 300 NIGQGRENTIQYFLDNPEFAQDVEQQVRQKLDLG 333
>gi|158340276|ref|YP_001521446.1| recombinase A [Acaryochloris marina MBIC11017]
gi|158310517|gb|ABW32132.1| protein RecA [Acaryochloris marina MBIC11017]
Length = 357
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/335 (58%), Positives = 259/335 (77%), Gaps = 2/335 (0%)
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
S + ++Q+ALD M ++ +FGKG++ RLG A +ET SG LTLDLALGGGLP+
Sbjct: 2 SAKNEMTEKQKALDLVMKNVEKTFGKGAIMRLGDATRMQIETNSSGALTLDLALGGGLPR 61
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR++EI+GPESSGKTT+ALHAI+++QK GG A VDAEHA DP Y+ ALGVD+ L+V Q
Sbjct: 62 GRVIEIYGPESSGKTTVALHAISQIQKTGGVAAFVDAEHALDPVYAAALGVDISELLVSQ 121
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD+GEMALEI D++ RS A+DL+ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK+
Sbjct: 122 PDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKI 181
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ N +K+G T+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG +
Sbjct: 182 TSNIAKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGTD 239
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
G+R +V+V K+KV+ P++ AEF+I+FG+G+S +GC++D AE DI+VRKGAWYSY
Sbjct: 240 MYGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTMGCLVDMAEETDIIVRKGAWYSYDGS 299
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+GQGR+ + Y DNP +E+E+ VR + GS
Sbjct: 300 NIGQGRENTIHYFLDNPEFSQEVEQQVRQKLELGS 334
>gi|33862118|ref|NP_893679.1| recombinase A [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|50403571|sp|Q7UZU3.1|RECA_PROMP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|33634336|emb|CAE20021.1| RecA bacterial DNA recombination protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 370
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/354 (56%), Positives = 269/354 (75%), Gaps = 4/354 (1%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLP 141
DS +S ++ +AL+ + I +FG+GS+ RLG A VET +G LTLDLALGGG P
Sbjct: 10 DSKESSSEEKNKALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYP 69
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V
Sbjct: 70 KGRVVEVYGPESSGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASLGVDVENLLVS 129
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPD GEMALEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK
Sbjct: 130 QPDTGEMALEIVDQLIRSTAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRK 189
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G
Sbjct: 190 ITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGT 247
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E+ G+R +V+V K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY
Sbjct: 248 EEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEG 307
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ +GQGRD + +L N ++ ++E +V++ +++G+ + ++ +L N EN
Sbjct: 308 ENIGQGRDNTIIWLDQNLEIKNKVESIVKTKLTEGTEVSSNSMK--ALNNNPEN 359
>gi|148243210|ref|YP_001228367.1| recombinase A [Synechococcus sp. RCC307]
gi|147851520|emb|CAK29014.1| RecA protein (recombinase A) [Synechococcus sp. RCC307]
Length = 373
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 253/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R++AL +N I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VEI+
Sbjct: 13 EREKALGLVLNQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIY 72
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +LGVD+ENL+V QPD GEMA
Sbjct: 73 GPESSGKTTLTLHAIAEVQRSGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPDTGEMA 132
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 133 LEIVDQLVRSAAVDLVVVDSVAALTPRAEIEGEMGDLAVGAQARLMSQAMRKITGNIGKS 192
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K + E+ G+R +
Sbjct: 193 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RATEEYGIRAK 250
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +VVRKGAWYSY +GQGRD
Sbjct: 251 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVVRKGAWYSYNGDNVGQGRD 310
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L NP +EIE++ R ++ G+
Sbjct: 311 NTITWLEQNPEACQEIEQLTRQKLTAGA 338
>gi|428210980|ref|YP_007084124.1| protein RecA [Oscillatoria acuminata PCC 6304]
gi|427999361|gb|AFY80204.1| protein RecA [Oscillatoria acuminata PCC 6304]
Length = 368
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/329 (60%), Positives = 257/329 (78%), Gaps = 3/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++ +AL ++ I SFGKG++ RLG A VET PSG LTLDLALGGGLPKGR++EI+
Sbjct: 10 EKDKALKVVLSQIERSFGKGAIMRLGDATKMRVETIPSGALTLDLALGGGLPKGRVIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPES+GKTTLALHA+AEVQK GG A VDAEHA DPSY+ +GVD+ENL+V QPD GEMA
Sbjct: 70 GPESAGKTTLALHALAEVQKAGGLAAFVDAEHALDPSYAAKVGVDIENLLVSQPDTGEMA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD++ RS A+DL+ +DSV+AL PRAEIEG++G IGLQARLMS ALRK++GN K+
Sbjct: 130 LEIADQLVRSAAVDLVVIDSVAALVPRAEIEGQMGDPTIGLQARLMSHALRKITGNIGKS 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 190 GCTVIFLNQLRQKIG-GYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEYGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S +GC++D AE ++ RKGAWYSY +GQGRD
Sbjct: 247 VKVAKNKVAPPFRIAEFDILFGKGISNMGCLIDLAEETGVINRKGAWYSYNGDNIGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
+L+YL +N + EIEK VR + G+V
Sbjct: 307 NSLKYLEENLPITNEIEKKVREQLELGAV 335
>gi|158340913|ref|YP_001522081.1| recombinase A [Acaryochloris marina MBIC11017]
gi|158311154|gb|ABW32767.1| protein RecA [Acaryochloris marina MBIC11017]
Length = 352
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/353 (56%), Positives = 265/353 (75%), Gaps = 6/353 (1%)
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
S + ++Q+ALD M ++ +FGKG++ RLG A +ET +G L LDLALGGGLPK
Sbjct: 2 SAKTEMTEKQKALDLVMKNVEKTFGKGAIMRLGDAARMQIETISTGALPLDLALGGGLPK 61
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR++E++GPESSGKTT+ALHAIAE+QK GG A VDAEHA DP Y+ ALGVDV L+VCQ
Sbjct: 62 GRVIEVYGPESSGKTTVALHAIAEIQKSGGVAAFVDAEHALDPVYAAALGVDVSELLVCQ 121
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD+GEMALE+ D++ RS A+DL+ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK+
Sbjct: 122 PDSGEMALEVVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKI 181
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ N K+G T+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E
Sbjct: 182 TSNICKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRVQTLK--KGTE 239
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
G+R +V+V K+KV+ P+K AEF+I+FG+G+S +GC++D AE +++VRKGAWYSY
Sbjct: 240 MYGIRAKVKVAKNKVAPPFKLAEFDILFGQGISTVGCLVDMAEEAEVIVRKGAWYSYDGS 299
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+GQGR+ +QY D+P ++IE+ VR + G G N + P + E+
Sbjct: 300 NIGQGRENTIQYFGDHPEFSQKIEQQVRQKLELG----GEVSANSTTPVEVED 348
>gi|158338580|ref|YP_001519757.1| recombinase A [Acaryochloris marina MBIC11017]
gi|158308821|gb|ABW30438.1| protein RecA [Acaryochloris marina MBIC11017]
Length = 350
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/328 (60%), Positives = 256/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+ALD + ++ SFGKGS+ RLG A VET SG LTLDLALGGGLP+GR++EI+
Sbjct: 9 EKQKALDLVLKNVERSFGKGSIMRLGDAARMQVETISSGALTLDLALGGGLPRGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHAIA++QK GG A VDAEHA DP Y+ ALGVDV L+V QPD+GEMA
Sbjct: 69 GPESSGKTTVALHAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVSQPDSGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK++ N K+
Sbjct: 129 LEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKITSNICKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E G+R +
Sbjct: 189 GSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGTEMYGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S LGC++D AE +I+VRKGAWYS+ +GQGRD
Sbjct: 247 VKVAKNKVAPPFRIAEFDILFGQGISTLGCLVDMAEETNIIVRKGAWYSFDGNNIGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+QY DNP + +E+ VR + G+
Sbjct: 307 NTIQYFADNPEFTDSVEQQVRQRLELGA 334
>gi|78185515|ref|YP_377950.1| recombinase A [Synechococcus sp. CC9902]
gi|123729905|sp|Q3AUV9.1|RECA_SYNS9 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|78169809|gb|ABB26906.1| RecA protein [Synechococcus sp. CC9902]
Length = 376
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 252/328 (76%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VEI+
Sbjct: 19 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIY 78
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 79 GPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPHYAASLGVDVENLLVSQPDTGEMA 138
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+ALTPR+EIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 139 LEIVDQLVRSAAVDIVVIDSVAALTPRSEIEGEMGDVSVGAQARLMSQAMRKITGNIGKS 198
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 199 GCTVIFLNQLRLKIGVMYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 256
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S +GC+LD AE +VVRKGAWYSY +GQGRD
Sbjct: 257 VKVAKNKVAPPFRIAEFDILFGRGISTVGCLLDLAEETGVVVRKGAWYSYEGDNIGQGRD 316
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ ++ NP IE +VR +++G+
Sbjct: 317 NTIVWMEQNPEAATTIETLVRQKLNEGT 344
>gi|428217666|ref|YP_007102131.1| protein recA [Pseudanabaena sp. PCC 7367]
gi|427989448|gb|AFY69703.1| Protein recA [Pseudanabaena sp. PCC 7367]
Length = 381
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/351 (56%), Positives = 265/351 (75%), Gaps = 5/351 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+++RALD + I GKGS+ RLG A V T PSG LTLDLALGGGLP+GR++E++
Sbjct: 36 EKKRALDVVLQKIEKDHGKGSIMRLGDAAAMRVATIPSGALTLDLALGGGLPRGRVIEVY 95
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP+Y+ +GVD++NL+V QPD GEMA
Sbjct: 96 GPESSGKTTLVLHAIAEVQKQGGIAAFVDAEHALDPTYAARVGVDIDNLLVSQPDTGEMA 155
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN ++
Sbjct: 156 LEIVDQLVRSMAVDIVAIDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKITGNIGRS 215
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT++FLNQ+R KIG+ YG+PEVT+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 216 NCTVVFLNQLRQKIGISYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGAEEYGIRAK 273
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S++GC+LD AE MDIV R+GAWYSY L QGRD
Sbjct: 274 VKVAKNKVAPPFRIAEFDIIFGKGISRMGCLLDLAEEMDIVTRRGAWYSYNGDNLAQGRD 333
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEEF 440
++++ +N + +EK VR ++ G+ Q S + P+ +E EEF
Sbjct: 334 NTIKHMEENLEFAQTVEKQVREKLALGT--QVSAMVP-GAPDADEETAEEF 381
>gi|443327255|ref|ZP_21055884.1| protein RecA [Xenococcus sp. PCC 7305]
gi|442793123|gb|ELS02581.1| protein RecA [Xenococcus sp. PCC 7305]
Length = 356
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 263/325 (80%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ + I +FGKGS+ RLG A VET PSG LTLD+ALGGGLPKGRI+EI+
Sbjct: 12 DKEKALNLVLKQIERNFGKGSIMRLGDAAQMKVETIPSGALTLDIALGGGLPKGRIIEIY 71
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE+QK GG A VDAEHA DP+YSKALGVD+ENL+V QPD+GE A
Sbjct: 72 GPESSGKTTLALHAIAEIQKTGGVAAFVDAEHALDPTYSKALGVDIENLLVAQPDHGESA 131
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN ++
Sbjct: 132 LEIVDQLVRSAAVDLVVIDSVAALVPRAEIEGEMGDNQMGLQARLMSKALRKIAGNIGRS 191
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED-VGVRV 328
G T+IFLNQ+R KIG+ YGNPEVT+GG ALKF+ASVRL+IR + +K KG ED G RV
Sbjct: 192 GSTVIFLNQLRQKIGITYGNPEVTTGGTALKFYASVRLDIRRSQSLK--KGSEDQYGNRV 249
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GC+LD AE DI+VRKGAWYSY +GQGR
Sbjct: 250 KVKVAKNKVAPPFRVAEFDIIFGQGISRMGCILDIAESEDIIVRKGAWYSYNGDNIGQGR 309
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ + YL +N L +E+E++VR +
Sbjct: 310 ENTITYLTENSELAKEVEQLVRDKL 334
>gi|158338139|ref|YP_001519315.1| recombinase A [Acaryochloris marina MBIC11017]
gi|158308380|gb|ABW29997.1| protein RecA [Acaryochloris marina MBIC11017]
Length = 352
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/328 (59%), Positives = 256/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+ALD M ++ +FGKGS+ RLG A +ET +G LTLDLALGGGLP+GR++EI+
Sbjct: 9 EKQKALDLVMKNVERTFGKGSIMRLGDATRMQIETISTGALTLDLALGGGLPRGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHAIA++QK GG A VDAEHA DP Y+ ALGVDV L+V QPD+GEMA
Sbjct: 69 GPESSGKTTVALHAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVSQPDSGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK++ N SK+
Sbjct: 129 LEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKITSNISKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG + G+R +
Sbjct: 189 GSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGTDMFGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S GC++D AE D++VRKGAWYS+ +GQGR+
Sbjct: 247 VKVAKNKVAPPFRIAEFDILFGQGISTTGCLVDMAEETDVIVRKGAWYSFDGNNIGQGRE 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+QY DNP E +E+ VR + G+
Sbjct: 307 NTIQYFIDNPEFAENVEQQVRQKLELGA 334
>gi|359459400|ref|ZP_09247963.1| recombinase A [Acaryochloris sp. CCMEE 5410]
Length = 350
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 256/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+ALD + ++ SFGKGS+ RLG A VET SG LTLDLALGGGLP+GR++EI+
Sbjct: 9 EKQKALDLVLKNVERSFGKGSIMRLGDAARMQVETISSGALTLDLALGGGLPRGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHAIA++QK GG A VDAEHA DP Y+ ALGVDV L+V QPD+GEMA
Sbjct: 69 GPESSGKTTVALHAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVSQPDSGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK++ N K+
Sbjct: 129 LEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKITSNICKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG + G+R +
Sbjct: 189 GSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGTDMYGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S LGC++D AE +I+VRKGAWYS+ +GQGRD
Sbjct: 247 VKVAKNKVAPPFRIAEFDILFGQGISTLGCLVDMAEETNIIVRKGAWYSFDGNNIGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+QY DNP + +E+ VR + G+
Sbjct: 307 NTIQYFADNPEFTDSVEQQVRQRLELGA 334
>gi|303271543|ref|XP_003055133.1| recA DNA recombinase [Micromonas pusilla CCMP1545]
gi|226463107|gb|EEH60385.1| recA DNA recombinase [Micromonas pusilla CCMP1545]
Length = 446
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/323 (61%), Positives = 261/323 (80%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPE 152
RALD + +I+++FGKGS+ +LG+A A V TFPSG +TLD+ALGGGLP+GRIVE++GPE
Sbjct: 100 RALDRVLGEIDANFGKGSIMKLGTASQAKVATFPSGAMTLDIALGGGLPRGRIVEVYGPE 159
Query: 153 SSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEI 212
SSGKTTLALHA+AE+QK GGN L+DAEHAFDP YS LGV V +IVCQP+ GEM LE+
Sbjct: 160 SSGKTTLALHAMAEMQKFGGNVALIDAEHAFDPEYSARLGVKVNEVIVCQPETGEMGLEV 219
Query: 213 ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCT 272
D + RSG IDLI VDSV+AL PR+EIEGEIGM Q+G ARLMSQALRK++ NA+KAG T
Sbjct: 220 VDALVRSGGIDLIVVDSVAALVPRSEIEGEIGMVQVGAHARLMSQALRKINVNAAKAGVT 279
Query: 273 LIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRV 332
+IFLNQ+R K+GV YGNPE+T+GG ALKF+ASVRL+IR IK G++D+G RV+V+V
Sbjct: 280 IIFLNQLRSKVGVIYGNPEITTGGNALKFYASVRLDIRRKEVIKGKSGEDDLGTRVKVKV 339
Query: 333 QKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKAL 392
K+KV+ PYK AEF+++FG G+ +GC LD A+ M +V ++GAWYSY D++LGQGR+K +
Sbjct: 340 AKNKVAPPYKVAEFDMLFGRGIDPMGCTLDAADNMGVVDKRGAWYSYNDEQLGQGREKTM 399
Query: 393 QYLRDNPLLQEEIEKVVRSMMSD 415
+ LR+NP + +EK VR ++++
Sbjct: 400 EKLRENPAMLASVEKDVRRIIAE 422
>gi|16332317|ref|NP_443045.1| recombinase A [Synechocystis sp. PCC 6803]
gi|383324058|ref|YP_005384912.1| recombinase A [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383327227|ref|YP_005388081.1| recombinase A [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383493111|ref|YP_005410788.1| recombinase A [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438379|ref|YP_005653104.1| recombinase A [Synechocystis sp. PCC 6803]
gi|451816468|ref|YP_007452920.1| RecA [Synechocystis sp. PCC 6803]
gi|2500096|sp|P74737.1|RECA_SYNY3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|1653947|dbj|BAA18857.1| RecA gene product [Synechocystis sp. PCC 6803]
gi|339275412|dbj|BAK51899.1| recombinase A [Synechocystis sp. PCC 6803]
gi|359273378|dbj|BAL30897.1| recombinase A [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276548|dbj|BAL34066.1| recombinase A [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279718|dbj|BAL37235.1| recombinase A [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|451782437|gb|AGF53406.1| RecA [Synechocystis sp. PCC 6803]
Length = 354
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/351 (58%), Positives = 265/351 (75%), Gaps = 12/351 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR++AL+AA+ I SFGKG++ RLG A VET +G LTLDLALGGGLPKGRIVEI+
Sbjct: 8 DREKALNAALAQIERSFGKGAIMRLGDATQMRVETISTGALTLDLALGGGLPKGRIVEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA+A Q+ GG A VDAEHA DP YSKALGVD++NL+V QPDNGE A
Sbjct: 68 GPESSGKTTLALHAVAATQQAGGVAAFVDAEHALDPVYSKALGVDIDNLLVAQPDNGESA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D+I VDSV+AL PRAEIEGE+G +G QARLMS+A+RK++GN ++
Sbjct: 128 LEIVDQLVRSTAVDIIVVDSVAALVPRAEIEGEMGDTSVGSQARLMSKAMRKIAGNIGRS 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 188 GCLVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GC +D AE +++ RKGAWYSY + + QGR
Sbjct: 246 KVKVAKNKVAPPFRIAEFDIIFGQGISRMGCTIDLAEKCEVITRKGAWYSYNGENIAQGR 305
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
D A++YL +NP + I++ VR +S L N P + E+ EE
Sbjct: 306 DNAMKYLEENPEIAATIDQQVREKLS---------LVNAVFPVETEDGAEE 347
>gi|158336682|ref|YP_001517856.1| recombinase A [Acaryochloris marina MBIC11017]
gi|158306923|gb|ABW28540.1| protein RecA [Acaryochloris marina MBIC11017]
Length = 356
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/328 (60%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++ +AL +N I +FGKGS+ RLG A VET SG LTLDLALGGGLPKGR++EI+
Sbjct: 10 EKDKALGVVLNQIERTFGKGSIMRLGDATQMKVETISSGALTLDLALGGGLPKGRVIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQ+ GG A VDAEHA DP+Y+ ALGVD ENL+V QPD GE A
Sbjct: 70 GPESSGKTTLALHAIAEVQRSGGIAAFVDAEHALDPTYASALGVDTENLLVAQPDTGESA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN +
Sbjct: 130 LEIVDQLVRSTAVDIVVIDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGRT 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT++FLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 190 GCTVVFLNQLRQKIGVTYGNPEVTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 247
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ EF+IIFG+G+S LGC+LD AE DI+VRKGAWYSY + +GQGRD
Sbjct: 248 VKVVKNKVAPPFRIGEFDIIFGQGISTLGCLLDMAEETDILVRKGAWYSYNGENIGQGRD 307
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++Y++DNP E + + VR+ + G+
Sbjct: 308 NTVRYMKDNPEFTESLTQQVRAKLDTGA 335
>gi|317968811|ref|ZP_07970201.1| recombinase A [Synechococcus sp. CB0205]
Length = 370
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/326 (60%), Positives = 251/326 (76%), Gaps = 2/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL +N I +FGKGS+ RLG A +ET P+G LTLDLALGGG PKGR+VE++
Sbjct: 14 ERDKALGLVLNQIERNFGKGSIMRLGDASRMRIETTPTGALTLDLALGGGYPKGRVVEVY 73
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 74 GPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAAALGVDIENLLVSQPDTGEMA 133
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 134 LEIVDQLVRSAAVDIVVVDSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 193
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 194 GCTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEFGIRAK 251
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S +GC+LD AE +VVRKGAWYSY +GQGRD
Sbjct: 252 VKVAKNKVAPPFRIAEFDILFGRGISTVGCLLDLAEEHGVVVRKGAWYSYEGDNIGQGRD 311
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSD 415
+ +L N +E IE VR +S+
Sbjct: 312 NTITWLEQNSTEKEAIEVKVRQKLSE 337
>gi|158339744|ref|YP_001520751.1| recombinase A [Acaryochloris marina MBIC11017]
gi|158309985|gb|ABW31601.1| protein RecA [Acaryochloris marina MBIC11017]
Length = 357
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/335 (57%), Positives = 258/335 (77%), Gaps = 2/335 (0%)
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
S + ++Q+ALD M ++ +FGKG++ RLG A +ET +G L LDLALGGGLPK
Sbjct: 2 SAKTEMTEKQKALDLVMKNVEKTFGKGAIMRLGDAARMQIETISTGALPLDLALGGGLPK 61
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR++E++GPESSGKTT+ALHAIAE+QK GG A VDAEHA DP Y+ ALGVDV L+VCQ
Sbjct: 62 GRVIEVYGPESSGKTTVALHAIAEIQKSGGVAAFVDAEHALDPVYAAALGVDVSELLVCQ 121
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD+GEMALE+ D++ RS A+DL+ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK+
Sbjct: 122 PDSGEMALEVVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKI 181
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ N K+G T+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E
Sbjct: 182 TSNICKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRVQTLK--KGTE 239
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
G+R +V+V K+KV+ P+K AEF+I+FG+G+S +GC++D A +++VRKGAWYSY
Sbjct: 240 MYGIRAKVKVAKNKVAPPFKLAEFDILFGQGISTIGCLVDMAAEAEVIVRKGAWYSYEGD 299
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+GQGR+ +QY D+P + +E+ VR ++ G+
Sbjct: 300 NIGQGRENTIQYFADHPEFAQAVEQQVRQRLALGA 334
>gi|308808812|ref|XP_003081716.1| recombination protein (ISS) [Ostreococcus tauri]
gi|116060182|emb|CAL56241.1| recombination protein (ISS) [Ostreococcus tauri]
Length = 396
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/349 (56%), Positives = 272/349 (77%), Gaps = 4/349 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+++AL +++I+S+FG G++ RLG AG A V TFPSG LTLD+ALGGGLP+GRIVE++G
Sbjct: 37 KKKALQRVLDEIDSNFGAGAIMRLGEAGKAKVATFPSGALTLDMALGGGLPRGRIVEVYG 96
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLALHA+AE+Q +GG ++DAEHAFDP YS LG++++++IVCQP+ GEMAL
Sbjct: 97 PESSGKTTLALHAMAEMQAIGGTVAIIDAEHAFDPEYSARLGLNLDDVIVCQPETGEMAL 156
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
E+ D + RS A+DLI VDSV+AL PR+EIEGEIGM Q+G ARLMSQALRK++ NA+KAG
Sbjct: 157 EVVDTLVRSSAVDLIVVDSVAALVPRSEIEGEIGMVQVGAHARLMSQALRKINVNAAKAG 216
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
T+IFLNQ+R K+GV YG+PEVT+GG ALK++ASVRL+IR IK G++D+GVR +V
Sbjct: 217 TTIIFLNQLRSKVGVIYGSPEVTTGGNALKYYASVRLDIRRKEVIKGKSGEDDLGVRCKV 276
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ PYK AEF+++FG G+SK GC+LD E + +V RKGA+Y Y ++LGQGR+K
Sbjct: 277 KVAKNKVAPPYKVAEFDMLFGRGISKDGCLLDAGEQVGVVDRKGAYYYYNGEKLGQGREK 336
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
L +L +N ++ IE VR +++ + + L N + +EE I ++
Sbjct: 337 TLAFLDENLPVKGTIEADVRRKVAE----KMAGLSNKPVAEEEEEIPDD 381
>gi|359459937|ref|ZP_09248500.1| recombinase A [Acaryochloris sp. CCMEE 5410]
Length = 356
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/328 (60%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++ +AL +N I +FGKGS+ RLG A VET SG LTLDLALGGGLPKGR++EI+
Sbjct: 10 EKDKALGVVLNQIERTFGKGSIMRLGDATQMKVETISSGALTLDLALGGGLPKGRVIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQ+ GG A VDAEHA DP+Y+ A+GVD ENL+V QPD GE A
Sbjct: 70 GPESSGKTTLALHAIAEVQRSGGIAAFVDAEHALDPTYASAVGVDTENLLVAQPDTGESA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN +
Sbjct: 130 LEIVDQLVRSTAVDIVVIDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGRT 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT++FLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 190 GCTVVFLNQLRQKIGVTYGNPEVTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 247
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ EF+IIFG+G+S LGC+LD AE DI++RKGAWYSY + +GQGRD
Sbjct: 248 VKVVKNKVAPPFRIGEFDIIFGQGISTLGCLLDMAEETDILIRKGAWYSYNGENIGQGRD 307
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++Y++DNP E + + VR+ + G+
Sbjct: 308 NTVRYMKDNPEFTESLTQQVRAKLDTGA 335
>gi|284929383|ref|YP_003421905.1| RecA protein [cyanobacterium UCYN-A]
gi|284809827|gb|ADB95524.1| RecA protein [cyanobacterium UCYN-A]
Length = 345
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/326 (59%), Positives = 254/326 (77%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++ALD +N I +FGKG++ RLG A VET +G LTLDLALGGGLPKGRI+EI+
Sbjct: 9 DKEKALDLVLNQIERNFGKGAIMRLGDAAKMKVETVSTGALTLDLALGGGLPKGRIIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DPSY+ LGVD++NL+V QPD GE
Sbjct: 69 GPESSGKTTLTLHAIAEVQKAGGVAAFVDAEHALDPSYASVLGVDIDNLLVAQPDTGESG 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D+I +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN ++
Sbjct: 129 LEIVDQLVRSSAVDIIVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNVGRS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC ++FLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCLVVFLNQLRQKIGVTYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE +++ RKGAWYSY + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGQGISNIGCIIDLAEQTNVISRKGAWYSYNGDNISQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
D A++YL +N + IE+ VR ++
Sbjct: 307 DNAVKYLEENSEFTKIIEQQVREKLA 332
>gi|126697091|ref|YP_001091977.1| recombinase A [Prochlorococcus marinus str. MIT 9301]
gi|166220663|sp|A3PF51.1|RECA_PROM0 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|126544134|gb|ABO18376.1| RecA bacterial DNA recombination protein [Prochlorococcus marinus
str. MIT 9301]
Length = 365
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/328 (58%), Positives = 255/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++ +AL + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++
Sbjct: 13 EKDKALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVY 72
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 73 GPESSGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 132
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+
Sbjct: 133 LEIVDQLIRSSAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKS 192
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 193 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 250
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD
Sbjct: 251 VKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRD 310
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L N ++ ++E +V+ +++G+
Sbjct: 311 NTIIWLDQNLEIRNKVESMVKEKLTEGT 338
>gi|254526096|ref|ZP_05138148.1| protein RecA [Prochlorococcus marinus str. MIT 9202]
gi|221537520|gb|EEE39973.1| protein RecA [Prochlorococcus marinus str. MIT 9202]
Length = 365
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 255/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++ +AL + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++
Sbjct: 13 EKDKALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVY 72
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 73 GPESSGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 132
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+
Sbjct: 133 LEIVDQLIRSSAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKS 192
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 193 GCTVIFLNQLRLKIGITYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 250
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD
Sbjct: 251 VKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRD 310
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L N ++ ++E +V+ +++G+
Sbjct: 311 NTIIWLDQNLEIKNKVESMVKEKLTEGT 338
>gi|123966977|ref|YP_001012058.1| recombinase A [Prochlorococcus marinus str. MIT 9515]
gi|166220666|sp|A2BYU0.1|RECA_PROM5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123201343|gb|ABM72951.1| RecA bacterial DNA recombination protein [Prochlorococcus marinus
str. MIT 9515]
Length = 370
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 255/324 (78%), Gaps = 2/324 (0%)
Query: 94 ALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPES 153
AL+ + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++GPES
Sbjct: 22 ALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPES 81
Query: 154 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIA 213
SGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMALEI
Sbjct: 82 SGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIV 141
Query: 214 DRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTL 273
D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+GCT+
Sbjct: 142 DQLIRSTAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTV 201
Query: 274 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQ 333
IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +V+V
Sbjct: 202 IFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAKVKVA 259
Query: 334 KSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQ 393
K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD +
Sbjct: 260 KNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRDNTII 319
Query: 394 YLRDNPLLQEEIEKVVRSMMSDGS 417
+L N +++++E +V+S +++G+
Sbjct: 320 WLDQNLEIKKKVEGIVKSKLTEGT 343
>gi|428206763|ref|YP_007091116.1| recombinase A [Chroococcidiopsis thermalis PCC 7203]
gi|428008684|gb|AFY87247.1| RecA protein [Chroococcidiopsis thermalis PCC 7203]
Length = 358
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/328 (61%), Positives = 259/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL+ +N I +FGKG++ RLG A VET SG LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALNLVLNQIERNFGKGAIVRLGDATRMRVETISSGSLTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GE L
Sbjct: 70 PESSGKTTVALHAIAEVQKAGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEAGL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVIVDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G RV+V
Sbjct: 190 CTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+G+S LGCM+D AE ++VRKGAWYSY + + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGISTLGCMVDIAEETGVIVRKGAWYSYKGENIAQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
++YL +N + +EI+K+VR + G+V
Sbjct: 308 TIKYLEENTEVAQEIQKLVREKLDMGAV 335
>gi|254410787|ref|ZP_05024565.1| protein RecA [Coleofasciculus chthonoplastes PCC 7420]
gi|196182142|gb|EDX77128.1| protein RecA [Coleofasciculus chthonoplastes PCC 7420]
Length = 361
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/329 (58%), Positives = 257/329 (78%), Gaps = 1/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL+ +N I +FGKGS+ RLG A VET SG +TLDLALGGGLP+GRI+EI+
Sbjct: 10 EKEKALNLVLNQIERTFGKGSIMRLGDATRMKVETISSGAITLDLALGGGLPRGRIIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA+AEVQK GG A VDAEHA DP+YS ALGVD+ NL+V QPD+GE A
Sbjct: 70 GPESSGKTTLALHAVAEVQKSGGVAAFVDAEHALDPTYSSALGVDIANLLVSQPDSGESA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 130 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YG+PEVT+GG ALKF+ SVRL+IR +K E G+R +
Sbjct: 190 GCTVIFLNQLRQKIGITYGSPEVTTGGNALKFYCSVRLDIRRIQTLKKASEGE-YGIRAK 248
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S+LGC++D AE ++ RKGAWYSY + QGRD
Sbjct: 249 VKVAKNKVAPPFRIAEFDIIFGQGISRLGCLVDLAEQTGVINRKGAWYSYNGDNIAQGRD 308
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
+++Y+ +NP + IE+ VR + G++
Sbjct: 309 NSVRYIEENPEIAATIEQQVREQLDMGAM 337
>gi|428220677|ref|YP_007104847.1| protein RecA [Synechococcus sp. PCC 7502]
gi|427994017|gb|AFY72712.1| protein RecA [Synechococcus sp. PCC 7502]
Length = 368
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/329 (61%), Positives = 262/329 (79%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+ALD + I S GKG++ +LG+A G VET +G LTLDLALGGGLPKGR++EI+
Sbjct: 21 EKQKALDLVLGQIEKSHGKGAIMKLGAATGMKVETISTGALTLDLALGGGLPKGRVIEIY 80
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE+QK GG A VDAEHA DP YS LGVD++NL++ QPD GEMA
Sbjct: 81 GPESSGKTTLALHAIAEIQKQGGTAAFVDAEHALDPHYSAKLGVDIDNLLISQPDTGEMA 140
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN ++
Sbjct: 141 LEIVDQLVRSMAVDIVVIDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKITGNIGRS 200
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG ED G RV+
Sbjct: 201 NCTVIFLNQLRQKIGVVYGSPEVTTGGTALKFYASVRLDIRKQETLK--KGTEDYGNRVK 258
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S GC+LD AE ++I+ RKGAWYSY + + QGR+
Sbjct: 259 VKVVKNKVAPPFRIAEFDIIFGKGISVAGCLLDVAEEIEILTRKGAWYSYAGENVAQGRE 318
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
K L++L DNP L +EIE +V+ ++ G+V
Sbjct: 319 KVLKHLEDNPELFKEIETLVKEKLAMGAV 347
>gi|157414167|ref|YP_001485033.1| recombinase A [Prochlorococcus marinus str. MIT 9215]
gi|166918714|sp|A8G766.1|RECA_PROM2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157388742|gb|ABV51447.1| RecA DNA recombination protein [Prochlorococcus marinus str. MIT
9215]
Length = 365
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/328 (58%), Positives = 255/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++ +AL + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++
Sbjct: 13 EKDKALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVY 72
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 73 GPESSGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 132
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+
Sbjct: 133 LEIVDQLIRSSAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKS 192
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 193 GCTVIFLNQLRLKIGITYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 250
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD
Sbjct: 251 VKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRD 310
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L N ++ ++E +++ +++G+
Sbjct: 311 NTIIWLDQNLEIKNKVESMIKEKLTEGT 338
>gi|332706277|ref|ZP_08426345.1| RecA protein [Moorea producens 3L]
gi|332354982|gb|EGJ34454.1| RecA protein [Moorea producens 3L]
Length = 361
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/330 (58%), Positives = 259/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL+ + I +FGKG++ RLG A VET SG +TLDLALGGGLPKGRI+EI+
Sbjct: 10 EKEKALNLVLKQIERNFGKGAIMRLGDATRMKVETIRSGAITLDLALGGGLPKGRIIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA++EVQK GG A VDAEHA DP+YS ALGVD+ NL+V QPD GE A
Sbjct: 70 GPESSGKTTLALHAVSEVQKSGGVAAFVDAEHALDPTYSAALGVDIANLLVSQPDTGESA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 130 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GCT+IFLNQ+R KIG+ YG+PEVT+GG ALKF+ASVRL+IR +K K +E + G+R
Sbjct: 190 GCTVIFLNQLRQKIGITYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KSNEGEYGIRA 247
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S+LGC++D AE +++RKGAWYS+ + QGR
Sbjct: 248 KVKVAKNKVAPPFRIAEFDIIFGQGISRLGCLVDLAEQTKVILRKGAWYSHNGDNIAQGR 307
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D ++YL ++P E IE+ VR + G+V
Sbjct: 308 DNTVKYLVEHPEFAENIEQQVRQQLDMGAV 337
>gi|78780039|ref|YP_398151.1| recombinase A [Prochlorococcus marinus str. MIT 9312]
gi|123741423|sp|Q318I0.1|RECA_PROM9 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|78713538|gb|ABB50715.1| RecA protein [Prochlorococcus marinus str. MIT 9312]
Length = 365
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 252/324 (77%), Gaps = 2/324 (0%)
Query: 94 ALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPES 153
AL + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++GPES
Sbjct: 17 ALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPES 76
Query: 154 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIA 213
SGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMALEI
Sbjct: 77 SGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIV 136
Query: 214 DRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTL 273
D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+GCT+
Sbjct: 137 DQLIRSSAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTV 196
Query: 274 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQ 333
IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +V+V
Sbjct: 197 IFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAKVKVA 254
Query: 334 KSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQ 393
K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD +
Sbjct: 255 KNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRDNTII 314
Query: 394 YLRDNPLLQEEIEKVVRSMMSDGS 417
+L N ++ ++E +V+ +++G+
Sbjct: 315 WLDQNLEIRNKVESMVKEKLTEGT 338
>gi|123969301|ref|YP_001010159.1| recombinase A [Prochlorococcus marinus str. AS9601]
gi|166220667|sp|A2BTE1.1|RECA_PROMS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|91070237|gb|ABE11157.1| RecA bacterial DNA recombination protein [uncultured
Prochlorococcus marinus clone HF10-11H11]
gi|123199411|gb|ABM71052.1| RecA bacterial DNA recombination protein [Prochlorococcus marinus
str. AS9601]
Length = 365
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 252/324 (77%), Gaps = 2/324 (0%)
Query: 94 ALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPES 153
AL + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++GPES
Sbjct: 17 ALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPES 76
Query: 154 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIA 213
SGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMALEI
Sbjct: 77 SGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIV 136
Query: 214 DRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTL 273
D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+GCT+
Sbjct: 137 DQLIRSSAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTV 196
Query: 274 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQ 333
IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +V+V
Sbjct: 197 IFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAKVKVA 254
Query: 334 KSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQ 393
K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD +
Sbjct: 255 KNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRDNTII 314
Query: 394 YLRDNPLLQEEIEKVVRSMMSDGS 417
+L N ++ ++E +V+ +++G+
Sbjct: 315 WLDQNLEIRNKVESMVKEKLTEGT 338
>gi|300869353|ref|ZP_07113943.1| Protein recA [Oscillatoria sp. PCC 6506]
gi|300332652|emb|CBN59141.1| Protein recA [Oscillatoria sp. PCC 6506]
Length = 359
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/345 (58%), Positives = 265/345 (76%), Gaps = 2/345 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL+ +N I SFGKG++ RLG A VET PSG LTLD+ALGGGLPKGR++EI+
Sbjct: 10 EKQKALNLVLNQIERSFGKGAIVRLGDATRMRVETIPSGALTLDIALGGGLPKGRVIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DPSY+ LGVD+ NL+V QPD GEMA
Sbjct: 70 GPESSGKTTLALHAIAEVQKSGGIAAFVDAEHALDPSYASVLGVDIVNLLVSQPDTGEMA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 130 LEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G RV+
Sbjct: 190 GCTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRIQSLK--KGTEEYGNRVK 247
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S GC++D AE I+ +KG+WYSY +GQGR+
Sbjct: 248 VKVAKNKVAPPFRIAEFDIVFGKGISTTGCLVDLAEETGIITKKGSWYSYNGDNIGQGRE 307
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
++Y +NP + +IE++VR ++ G+V + + + + EE
Sbjct: 308 TTIKYTDENPEFKTQIEQLVRQKLASGAVVSANSVAPIDAEDSEE 352
>gi|427711676|ref|YP_007060300.1| recombinase A [Synechococcus sp. PCC 6312]
gi|427375805|gb|AFY59757.1| RecA protein [Synechococcus sp. PCC 6312]
Length = 353
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/350 (57%), Positives = 267/350 (76%), Gaps = 5/350 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL+ +N I SFGKGS+ RLG A VET P+G LTLDLALGGG+P+GR++EI+
Sbjct: 9 EKQKALNLVVNQIEKSFGKGSIMRLGDATRMRVETTPTGALTLDLALGGGIPRGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA+AE+QK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GE
Sbjct: 69 GPESSGKTTLALHAVAEIQKAGGVAAFVDAEHALDPTYAAALGVDIENLLVAQPDTGEAG 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN K
Sbjct: 129 LEIVDQLVRSTAVDVVVVDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKITGNIGKT 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 189 GCTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRVQTLK--KGTEEFGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF++IFG+G+S LGC++D AE +++ R+GAWYSY + QGRD
Sbjct: 247 VKVAKNKVAPPFRVAEFDVIFGKGISSLGCIVDMAEETNVITRRGAWYSYEGDNIAQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
++YL DNP ++E +VR + G+V + +V+ P+ E + E+
Sbjct: 307 NTIKYLEDNPEFARKVENLVREKLDKGAVVSAN---SVAHPHDEAQVEED 353
>gi|147677636|ref|YP_001211851.1| RecA/RadA recombinase [Pelotomaculum thermopropionicum SI]
gi|146273733|dbj|BAF59482.1| RecA/RadA recombinase [Pelotomaculum thermopropionicum SI]
Length = 342
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/329 (59%), Positives = 256/329 (77%), Gaps = 4/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
DRQ+AL+ A+ I FGKGS+ +LG A L VE P+G L LD+ALG GG+P+GR++E
Sbjct: 3 DRQKALELALMQIERQFGKGSIMKLGEASAKLNVEVIPTGALALDIALGVGGVPRGRVIE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTT+ALH IAE QK+GG A VDAEHA DP Y+K LGVD+ENL+V QPD GE
Sbjct: 63 IFGPESSGKTTVALHVIAEAQKMGGTAAFVDAEHALDPVYAKNLGVDIENLLVSQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 123 QALEIAEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAIS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ T+IF+NQIR K+GV YG+PE T+GG ALKF+AS+RLE+R IK +G + +G R
Sbjct: 183 KSRTTVIFINQIREKVGVVYGSPETTTGGRALKFYASIRLEVRKQENIK--QGTDIIGSR 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQA+F+I++G G+SK G +LD A ++IV + GAWYS+G++RLGQG
Sbjct: 241 TRVKVVKNKVAPPFKQADFDIMYGTGISKEGSILDMATELNIVEKSGAWYSFGEERLGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
R+ +YLR++P + EIE+ VR ++ G
Sbjct: 301 RENVKEYLREHPEITREIERKVRQALNVG 329
>gi|121536015|ref|ZP_01667805.1| recA protein [Thermosinus carboxydivorans Nor1]
gi|121305405|gb|EAX46357.1| recA protein [Thermosinus carboxydivorans Nor1]
Length = 345
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/332 (57%), Positives = 255/332 (76%), Gaps = 4/332 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+ AM I FGKGS+ RLG A + VE P+GCL LD+ALG GG+P+GR+V
Sbjct: 1 MDKLKALENAMRQIEKEFGKGSIMRLGEAAAKMNVEVIPTGCLALDIALGVGGIPRGRVV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+G ESSGKTT+ALH IA+ QK+GG A +DAEHA DP Y+K LGVD ENL++ QPDNG
Sbjct: 61 EIYGHESSGKTTVALHMIAQAQKMGGIAAFIDAEHALDPIYAKKLGVDTENLLISQPDNG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 121 EQALEIADALVRSGAIDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGII 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ T IF+NQIR K+GV +GNPE T+GG ALKF+ASVRLE+R IK +G E +G
Sbjct: 181 SKSRTTAIFINQIREKVGVMFGNPETTTGGRALKFYASVRLEVRKAEAIK--QGSEVIGS 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R R++V K+KV+ P++QAEF+I++GEG+S+ G ++D +DI+ + G+WYSY D RLGQ
Sbjct: 239 RTRIKVVKNKVAPPFRQAEFDIMYGEGISREGSLVDIGTELDIITKSGSWYSYKDSRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
G++ +YL++NP + EEIE +R ++ G++
Sbjct: 299 GKENVKEYLKENPHIAEEIEMKIREALTGGAI 330
>gi|354564944|ref|ZP_08984120.1| Protein recA [Fischerella sp. JSC-11]
gi|353550070|gb|EHC19509.1| Protein recA [Fischerella sp. JSC-11]
Length = 359
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/338 (59%), Positives = 261/338 (77%), Gaps = 2/338 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL+ +N I +FGKG++ RLG A VET SG LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALNMVLNQIERTFGKGTIMRLGDATRMRVETISSGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLALHA+AEVQK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GE AL
Sbjct: 70 PESSGKTTLALHAVAEVQKNGGIAAYVDAEHALDPTYAAALGVDIENLLVSQPDTGEAAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IFLNQ+R KIGV YGNPE T+GG ALK++ASVRL+IR +K KG E+ G RV+V
Sbjct: 190 CTVIFLNQLRQKIGVSYGNPETTTGGNALKYYASVRLDIRRIQTLK--KGTEEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG G+S LGC++D AE ++ RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRVAEFDIIFGRGISTLGCLVDLAEETGVLNRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVS 428
A++YL + P E+I+++VR + G+V + +R +
Sbjct: 308 AIKYLDEKPEFAEQIKQLVREKLEKGAVVSANSVRKTN 345
>gi|427732631|ref|YP_007078868.1| protein RecA [Nostoc sp. PCC 7524]
gi|427368550|gb|AFY51271.1| protein RecA [Nostoc sp. PCC 7524]
Length = 358
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 259/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL+ +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALNMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYAGALGVDIENLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGSDEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE I++RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILIRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P E+I+++VR + G+V
Sbjct: 308 AIKYLEEKPEFTEQIKQLVREKLDKGAV 335
>gi|434391661|ref|YP_007126608.1| Protein recA [Gloeocapsa sp. PCC 7428]
gi|428263502|gb|AFZ29448.1| Protein recA [Gloeocapsa sp. PCC 7428]
Length = 355
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/326 (61%), Positives = 257/326 (78%), Gaps = 2/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL+ +N I +FGKG++ RLG A VET P+G LTLDLALGGGLPKGR++EI+G
Sbjct: 11 KQKALNLVLNQIERNFGKGAIMRLGDATRMRVETIPTGALTLDLALGGGLPKGRVIEIYG 70
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHA+AEVQK GG A VDAEHA DP+Y+ ALGVD+ NL+V QPD GE AL
Sbjct: 71 PESSGKTTVALHAVAEVQKNGGVAAFVDAEHALDPTYAAALGVDIANLLVSQPDTGEAAL 130
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN K+G
Sbjct: 131 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKITGNIGKSG 190
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G RV+V
Sbjct: 191 CTVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGNRVKV 248
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+I+FG+GVS LGC++D AE +VVRKGAWYSY + QGRD
Sbjct: 249 KVAKNKVAPPFRVAEFDIVFGKGVSTLGCVIDLAEETGVVVRKGAWYSYNGDNIAQGRDN 308
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDG 416
A++YL +N L +I+++VR + G
Sbjct: 309 AIKYLEENFELAGQIQQLVREKLEMG 334
>gi|86609411|ref|YP_478173.1| recombinase A [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557953|gb|ABD02910.1| recA protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 358
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 256/328 (78%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL+ ++ I +FGKG++ RLG A VET PSG +TLDLALGGG PKGRI+E+F
Sbjct: 4 EKRKALEQVLSQIERNFGKGAIMRLGDATQMRVETIPSGAITLDLALGGGYPKGRIIEVF 63
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKT++ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD++NL++ QPD GE A
Sbjct: 64 GPESSGKTSIALHAIAEVQKQGGTAAFVDAEHALDPTYAAALGVDIQNLLISQPDTGEAA 123
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN SK
Sbjct: 124 LEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKIAGNVSKT 183
Query: 270 GCTLIFLNQIRYKI-GVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G ++FLNQ+R KI G+ YG E T+GG ALKF+ASVRL+IR +K KG E+ G+R
Sbjct: 184 GSIVLFLNQLRSKIGGIGYGPQETTTGGNALKFYASVRLDIRRVQTLK--KGAEEYGIRA 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF+IIFG+G+S +GC++D A+ M I+ R+G+WYSY ++ + QGR
Sbjct: 242 RVKVVKNKVAPPFRRAEFDIIFGQGISNIGCIIDLADEMGILKRRGSWYSYKEENVAQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
D + YL++NP L E+E VR +S G
Sbjct: 302 DNLVVYLKENPELLAEVEAAVREKLSAG 329
>gi|412992778|emb|CCO18758.1| recombinase A [Bathycoccus prasinos]
Length = 474
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 263/324 (81%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+++AL+ + +I+S+FGKGS+ +LGSAG A V TFPSG +TLD+ALGGGLP+GRIVEI+G
Sbjct: 108 KKKALERVLGEIDSTFGKGSIMKLGSAGQAKVATFPSGAMTLDMALGGGLPRGRIVEIYG 167
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLA+HA+AE+QKLGG L+DAEHAFDP Y+K LG++V++L+VCQP+ GEMAL
Sbjct: 168 PESSGKTTLAMHAMAEMQKLGGTVALIDAEHAFDPDYAKRLGLNVDDLVVCQPETGEMAL 227
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
E+ D + RS A+DLICVDSV+AL PR+EIEGEIGM Q+G ARLMSQALRK++ NA+KA
Sbjct: 228 EVVDTLVRSAAVDLICVDSVAALVPRSEIEGEIGMVQVGAHARLMSQALRKINVNAAKAN 287
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
T++FLNQ+R K+GV YGNPEVT+GG ALK+++SVRL+IR IK G++D+G RV+V
Sbjct: 288 TTILFLNQLRSKVGVIYGNPEVTTGGNALKYYSSVRLDIRRKEVIKGKAGEDDLGTRVKV 347
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ PYK AEF+++FG G+S GC+ D AE ++ +KG+WYS+ ++LGQGR+K
Sbjct: 348 KVAKNKVAPPYKVAEFDMMFGRGISSEGCVFDVAESTGVIEKKGSWYSFKGEQLGQGREK 407
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMS 414
+L ++ L EEI ++ R ++
Sbjct: 408 SLLAAKEKEGLYEEIVRLTREAIA 431
>gi|186683193|ref|YP_001866389.1| recombinase A [Nostoc punctiforme PCC 73102]
gi|238691204|sp|B2IWJ2.1|RECA_NOSP7 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|186465645|gb|ACC81446.1| recA protein [Nostoc punctiforme PCC 73102]
Length = 359
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 258/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET SG LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISSGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHA+AEVQ+ GG A VDAEHA DP+Y+ ALGVD++NL++ QPD GE AL
Sbjct: 70 PESSGKTTVALHALAEVQRNGGIAAFVDAEHALDPTYAAALGVDIDNLLISQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEYGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+G+S LGC++D AE I++RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGISTLGCVVDLAEETGIIIRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P EEI+K+VR + G+V
Sbjct: 308 AIKYLEEKPEFAEEIKKLVREKLDKGAV 335
>gi|119512651|ref|ZP_01631726.1| recombination protein [Nodularia spumigena CCY9414]
gi|119462722|gb|EAW43684.1| recombination protein [Nodularia spumigena CCY9414]
Length = 356
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/328 (60%), Positives = 258/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+++AL+ +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KEKALNIVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHA+AEVQK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHALAEVQKNGGVAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDIHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIG+ YG+PE T+GG ALKF+ASVRL+IR +K KG E+ G RV+V
Sbjct: 190 CTVIFINQLRQKIGITYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE I+VRKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRVAEFDIIFGKGVSTLGCLVDLAEETGIIVRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P EI+++VR + G+V
Sbjct: 308 AIKYLEEKPEFTAEIKELVRQKLDMGAV 335
>gi|254421418|ref|ZP_05035136.1| protein RecA [Synechococcus sp. PCC 7335]
gi|196188907|gb|EDX83871.1| protein RecA [Synechococcus sp. PCC 7335]
Length = 378
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/350 (57%), Positives = 263/350 (75%), Gaps = 2/350 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL + + I +FGKGS+ RLG A VET P+G LTLD+ALGGGLPKGR++EI+
Sbjct: 8 EKQKALTSVLTQIERNFGKGSIMRLGEASRMQVETIPTGALTLDMALGGGLPKGRVIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE+Q+ GG A VDAEHA DP Y+ LGVDVENL++ QPD GEM
Sbjct: 68 GPESSGKTTLALHAIAEIQRQGGVAAFVDAEHALDPYYAANLGVDVENLLISQPDTGEMG 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DLI VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GN K+
Sbjct: 128 LEICDQLVRSSAVDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNIGKS 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG++ G+RV+
Sbjct: 188 QCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGNDQFGIRVK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFGEG+S LGC+LD AE DIVVRKGAWYSY + QGRD
Sbjct: 246 VKVAKNKVAPPFRIAEFDIIFGEGISILGCLLDIAEEHDIVVRKGAWYSYEGNNVAQGRD 305
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
+ ++++P +++ V + ++ + +V P +E ++ E
Sbjct: 306 NTIIRMKEDPEFAAKVKAQVMEKIKPEAIPIEPEVESVVTPPEEVDVSAE 355
>gi|17230764|ref|NP_487312.1| recombinase A [Nostoc sp. PCC 7120]
gi|20139390|sp|P58552.1|RECA_NOSS1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|17132367|dbj|BAB74971.1| recombination protein [Nostoc sp. PCC 7120]
Length = 357
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/328 (60%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD++NL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASALGVDIQNLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE I++RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILIRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P E+I++ VR + G+V
Sbjct: 308 AIKYLEEKPEFSEQIKQQVREKLDKGAV 335
>gi|427709915|ref|YP_007052292.1| recombinase A [Nostoc sp. PCC 7107]
gi|427362420|gb|AFY45142.1| RecA protein [Nostoc sp. PCC 7107]
Length = 356
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/338 (58%), Positives = 261/338 (77%), Gaps = 2/338 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHA+AEVQ+LGG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHALAEVQRLGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSSAVDIVVIDSVAALVPRAEIEGDMGDTHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG E+ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+G+S LGC++D AE ++ RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGISVLGCLVDIAEETGVLTRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVS 428
A++YL + P E+I++ VR + G+V + + VS
Sbjct: 308 AIKYLEEKPEFVEQIKQQVRQKLDMGAVVSANSVAKVS 345
>gi|119494626|ref|ZP_01624747.1| recombination protein [Lyngbya sp. PCC 8106]
gi|119452050|gb|EAW33267.1| recombination protein [Lyngbya sp. PCC 8106]
Length = 331
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/323 (59%), Positives = 247/323 (76%), Gaps = 2/323 (0%)
Query: 113 RLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGG 172
RLG A VET PSG LTLDLALGGG+PKGR++EI+GPESSGKTTLALHAIAEVQ+ GG
Sbjct: 2 RLGDAPRMKVETIPSGALTLDLALGGGIPKGRVIEIYGPESSGKTTLALHAIAEVQRAGG 61
Query: 173 NAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSA 232
A VDAEHA DPSY+ LGVD+ENL+V QPD GEMALE+ D++ RS A+D++ +DSV+A
Sbjct: 62 VAAFVDAEHALDPSYASVLGVDIENLLVSQPDTGEMALEVVDQLVRSVAVDIVVIDSVAA 121
Query: 233 LTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEV 292
L PRAEIEGE+G +GLQARLMSQALRK++GN K+GCT+IFLNQ+R KIG+ YGNPE
Sbjct: 122 LVPRAEIEGEMGDAHMGLQARLMSQALRKITGNIGKSGCTVIFLNQLRQKIGITYGNPET 181
Query: 293 TSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGE 352
T+GG ALKF+ SVRL+IR +K KG ++ G+R +V+V K+KV+ P++ AEF+IIFG+
Sbjct: 182 TTGGNALKFYCSVRLDIRRIQTLK--KGTDEYGIRAKVKVAKNKVAPPFRIAEFDIIFGK 239
Query: 353 GVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSM 412
G+S LGC++D AE I+ RKG+WYSY +GQGR+K + Y+ +NP IEK+VR
Sbjct: 240 GISTLGCLVDLAEETGIIKRKGSWYSYNSDNIGQGREKTIIYMEENPEFTANIEKLVREK 299
Query: 413 MSDGSVHQGSFLRNVSLPNQEEN 435
+ G+V + + +V EN
Sbjct: 300 LDGGAVVSSNSVGHVDDAEDYEN 322
>gi|37522985|ref|NP_926362.1| recombinase A [Gloeobacter violaceus PCC 7421]
gi|60393011|sp|Q7NFV8.1|RECA_GLOVI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|35213988|dbj|BAC91357.1| recombination protein [Gloeobacter violaceus PCC 7421]
Length = 369
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/326 (61%), Positives = 255/326 (78%), Gaps = 2/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL + I +FG+G++ RLG VET PSG +TLDLALGGGLP+GR++EI+G
Sbjct: 23 KQKALKMVLTQIKRNFGEGAIMRLGENTRIRVETVPSGAITLDLALGGGLPRGRVIEIYG 82
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLALHAIAE+QK GG A VDAEHA DP+Y+K LGV+V++LI+ QPD GEMA+
Sbjct: 83 PESSGKTTLALHAIAEIQKTGGVAAFVDAEHALDPAYAKVLGVNVDDLIISQPDTGEMAM 142
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS AID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN K G
Sbjct: 143 EIVDQLVRSAAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKITGNIGKTG 202
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
C +IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG ++ G RVRV
Sbjct: 203 CMVIFLNQLRSKIGVMYGNPETTTGGNALKFYASVRLDIRKAETLK--KGQDEYGNRVRV 260
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P+++AEF+IIFG+G+S LGC+LD A M+IV RKGAWYSYG +RLGQGR+
Sbjct: 261 KVVKNKVAPPFRKAEFDIIFGKGISSLGCILDLAVEMEIVERKGAWYSYGSERLGQGREN 320
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDG 416
L L +N +EIE VR ++ G
Sbjct: 321 VLALLEENAAQAQEIEIKVREKIASG 346
>gi|75911121|ref|YP_325417.1| recombinase A [Anabaena variabilis ATCC 29413]
gi|92090633|sp|P14167.2|RECA_ANAVT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|75704846|gb|ABA24522.1| RecA protein [Anabaena variabilis ATCC 29413]
Length = 358
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/328 (60%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD++NL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASALGVDIQNLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE I++RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILLRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P E+I++ VR + G+V
Sbjct: 308 AIKYLEEKPEFAEQIKQQVREKLDKGAV 335
>gi|86605782|ref|YP_474545.1| recombinase A [Synechococcus sp. JA-3-3Ab]
gi|86554324|gb|ABC99282.1| recA protein [Synechococcus sp. JA-3-3Ab]
Length = 358
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 254/328 (77%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++ALD + I +FGKG++ RLG A VET PSG +TLDLA+GGG PKGRI+E+F
Sbjct: 4 EKRKALDQVLGQIERNFGKGAIMRLGDAAQMRVETIPSGAITLDLAMGGGYPKGRIIEVF 63
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKT++ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD++NL++ QPD GE A
Sbjct: 64 GPESSGKTSVALHAIAEVQKRGGTAAFVDAEHALDPAYAAALGVDIQNLLISQPDTGEAA 123
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN SK
Sbjct: 124 LEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKIAGNVSKT 183
Query: 270 GCTLIFLNQIRYKI-GVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G ++FLNQ+R KI G+ YG E T+GG ALKF+ASVRL+IR +K KG E+ G+R
Sbjct: 184 GSIVLFLNQLRSKIGGIGYGLQETTTGGNALKFYASVRLDIRRVQTLK--KGAEEYGIRA 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF+IIFG+G+S +GC++D AE M I+ R+G+WYSY ++ + QGR
Sbjct: 242 RVKVVKNKVAPPFRRAEFDIIFGQGISNIGCIVDLAEEMGILKRRGSWYSYKEENVAQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
D + YL++ P + E+E VR +S G
Sbjct: 302 DNLVVYLKEKPEILAEVEAAVREKLSAG 329
>gi|220907090|ref|YP_002482401.1| recombinase A [Cyanothece sp. PCC 7425]
gi|254790430|sp|B8HR52.1|RECA_CYAP4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|219863701|gb|ACL44040.1| recA protein [Cyanothece sp. PCC 7425]
Length = 357
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 254/329 (77%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL+ M I SFGKGS+ RLG A VET P+G L LDLALGGGLP+GR+VEI+
Sbjct: 10 EKQKALNLVMTQIERSFGKGSIMRLGDATRMKVETVPTGALPLDLALGGGLPRGRVVEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIA VQ+ GG A VDAEHA DP+Y+ LGVD++NL++ QPD GE A
Sbjct: 70 GPESSGKTTLALHAIAAVQQTGGIAAFVDAEHALDPAYAAVLGVDIQNLLISQPDTGETA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL P+AEIEG++G +GLQARLMSQALRK++GN K
Sbjct: 130 LEIVDQLVRSTAVDVVVIDSVAALVPKAEIEGDMGDAHVGLQARLMSQALRKITGNIGKT 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GC +IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G RV+
Sbjct: 190 GCIVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRVQTLK--KGTEEFGNRVK 247
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S+LGC+LD AE +V RKGAWYSY + L QGRD
Sbjct: 248 VKVAKNKVAPPFRVAEFDIIFGKGISRLGCILDMAEETGVVNRKGAWYSYNGENLAQGRD 307
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
++Y+ +NP IE++VR + G+V
Sbjct: 308 NTIKYMEENPEFARNIEQLVRQKLEMGAV 336
>gi|434402714|ref|YP_007145599.1| protein RecA [Cylindrospermum stagnale PCC 7417]
gi|428256969|gb|AFZ22919.1| protein RecA [Cylindrospermum stagnale PCC 7417]
Length = 358
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/338 (59%), Positives = 259/338 (76%), Gaps = 2/338 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL + I SFGKG++ RLG A VET SG LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALTMVLTQIERSFGKGAIMRLGDATRMRVETISSGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDIHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG E+ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D E ++VRKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGVSTLGCIVDLGEETGVLVRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVS 428
A++YL + P E+I++ VR + G++ + + VS
Sbjct: 308 AIKYLEEKPEFAEQIKQQVREKLDKGAIVSANSVTKVS 345
>gi|428305281|ref|YP_007142106.1| protein recA [Crinalium epipsammum PCC 9333]
gi|428246816|gb|AFZ12596.1| Protein recA [Crinalium epipsammum PCC 9333]
Length = 358
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/350 (57%), Positives = 264/350 (75%), Gaps = 3/350 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL+ +N I SFGKG++ RLG A VET P+G +TLDLALGGGLPKGRI+EI+
Sbjct: 11 EKQKALNLVLNQIEKSFGKGAIMRLGDATRMRVETIPTGAMTLDLALGGGLPKGRIIEIY 70
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD+ NL+V QPD GE
Sbjct: 71 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPAYSAALGVDIGNLLVSQPDTGEAG 130
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+ALTPRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 131 LEIVDQLVRSAAVDIVVIDSVAALTPRAEIEGDMGDTHVGLQARLMSQALRKVAGNIGKS 190
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR +K E G RV+
Sbjct: 191 GCTVIFLNQLRQKIGISYGNPETTTGGNALKFYASVRLDIRRIQTLKKANEGE-YGNRVK 249
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE I+ R+GAWYSY + QGRD
Sbjct: 250 VKVAKNKVAPPFRIAEFDIIFGKGISTVGCLVDIAEETGIITRRGAWYSYNGDNIAQGRD 309
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
++Y+ + P + + IE+ VR + G+V + + +V + EE+ +E
Sbjct: 310 NTIKYMEEKPEIAKVIEQQVRDKLDTGAVVSANSVAHVE--DSEEDFSDE 357
>gi|338814546|ref|ZP_08626560.1| recA protein [Acetonema longum DSM 6540]
gi|337273482|gb|EGO62105.1| recA protein [Acetonema longum DSM 6540]
Length = 348
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/331 (56%), Positives = 258/331 (77%), Gaps = 4/331 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL++AM I FGKGS+ +LG A + VE P+G ++LD+ALG GG+P+GR++
Sbjct: 1 MDKIKALESAMRQIEKDFGKGSIMKLGEAAAKMNVEVIPTGAISLDVALGVGGVPRGRVI 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+K LGVD++NL++ QPD+G
Sbjct: 61 EIYGPESSGKTTVALHVIAEAQKKGGIAAFIDAEHALDPVYAKKLGVDIDNLLISQPDHG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 121 EQALEIADALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGII 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ T IF+NQIR K+GV +GNPE T+GG ALKF+ASVRLE+R T IK G++ VG
Sbjct: 181 SKSRTTAIFINQIREKVGVMFGNPETTTGGRALKFYASVRLEVRRTESIKV--GNDAVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R +V+V K+K++ P+KQAEF+I++GEG+S+ GC++D A ++++ + GAWYSY + RLGQ
Sbjct: 239 RTKVKVVKNKIAPPFKQAEFDIMYGEGISREGCLVDIATELEVIDKSGAWYSYNNNRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
GR+ A +YL+ N + +EIE+ +R + G+
Sbjct: 299 GRENAKEYLKANKAVSDEIERRIRETLLQGN 329
>gi|326387207|ref|ZP_08208817.1| recombinase A [Novosphingobium nitrogenifigens DSM 19370]
gi|326208388|gb|EGD59195.1| recombinase A [Novosphingobium nitrogenifigens DSM 19370]
Length = 356
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/329 (60%), Positives = 249/329 (75%), Gaps = 3/329 (0%)
Query: 84 GDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPK 142
G + +DRQ+ALDAA+ I+ +FGKGSV +LG +E SG L LD+ALG GGLP+
Sbjct: 11 GKEKEMDRQKALDAALAQIDRAFGKGSVMKLGQKETMQIEAISSGSLGLDIALGIGGLPR 70
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLALH IAE QK GG A VDAEHA DP Y+K LGVD++NLIV Q
Sbjct: 71 GRIVEIYGPESSGKTTLALHVIAEAQKAGGTAAFVDAEHALDPVYAKKLGVDIDNLIVSQ 130
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+
Sbjct: 131 PDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKL 190
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G+ S++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE
Sbjct: 191 TGSISRSRCLVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR--DE 248
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + GAW+SY
Sbjct: 249 IVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSGAWFSYDSI 308
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
R+GQGR+ A YLR+NP + +E +RS
Sbjct: 309 RIGQGRENAKNYLRNNPEVCNRLEAAIRS 337
>gi|427719636|ref|YP_007067630.1| protein recA [Calothrix sp. PCC 7507]
gi|427352072|gb|AFY34796.1| Protein recA [Calothrix sp. PCC 7507]
Length = 359
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/328 (59%), Positives = 258/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL+ + I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALNIVLTQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHA+AEVQK GG A VDAEHA DP+Y++ALGVD++NL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHALAEVQKNGGIAAFVDAEHALDPTYAQALGVDIQNLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDTHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+G+S LGC++D AE I++RKGAWYSY + + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGISTLGCLVDLAEETGILLRKGAWYSYNGENISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P E+I + VR + G+V
Sbjct: 308 AIKYLEEKPEFAEKITQQVREKLDKGAV 335
>gi|338707127|ref|YP_004661328.1| recA protein [Zymomonas mobilis subsp. pomaceae ATCC 29192]
gi|336293931|gb|AEI37038.1| recA protein [Zymomonas mobilis subsp. pomaceae ATCC 29192]
Length = 355
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/336 (58%), Positives = 259/336 (77%), Gaps = 3/336 (0%)
Query: 81 SDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GG 139
+ SG +D+Q+ALDAA+ I+ +FGKGSV RLGS ++T SG L LD+ALG GG
Sbjct: 8 TTSGKDNDMDKQKALDAALAQIDRAFGKGSVMRLGSREKIEIDTISSGSLGLDIALGIGG 67
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
LP+GRIVEI+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGV+ E+LI
Sbjct: 68 LPRGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVNTEDLI 127
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
V QPD GE ALEI D + RS A+D++ +DSV+ALTPRAEIEGE+G +GLQARLMSQAL
Sbjct: 128 VSQPDTGEQALEITDTLIRSNAVDILVIDSVAALTPRAEIEGEMGDSHVGLQARLMSQAL 187
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK++G+ +++ +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK
Sbjct: 188 RKITGSINRSHTLVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR- 246
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
DE VG RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD I+ + G+W+S+
Sbjct: 247 -DEIVGNATRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELLDLGVKAGIIDKSGSWFSH 305
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSD 415
R+GQGR+ A YL+++P + E+IEK++R+ +++
Sbjct: 306 DSIRIGQGRENAKTYLKEHPDMAEKIEKMIRNNVTE 341
>gi|225351347|ref|ZP_03742370.1| hypothetical protein BIFPSEUDO_02941 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157691|gb|EEG70974.1| hypothetical protein BIFPSEUDO_02941 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 394
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/322 (59%), Positives = 248/322 (77%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
RQ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 23 RQAALDTALAQVEKSFGKGSAMRLGDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEIY 82
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++LIV QPDNGE A
Sbjct: 83 GPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQA 142
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 143 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 202
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF++SVR++IR IK+ GDE VG R +
Sbjct: 203 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYSSVRMDIRRIQTIKN--GDEAVGNRTK 260
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+SK G +LD A +++V + G+W++YG +LGQGR+
Sbjct: 261 VKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQVNVVKKSGSWFTYGGDQLGQGRE 320
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
Q+L+DNP L EEIE V++
Sbjct: 321 NVRQFLKDNPELTEEIENKVKA 342
>gi|323141085|ref|ZP_08075990.1| RecA protein [Phascolarctobacterium succinatutens YIT 12067]
gi|322414461|gb|EFY05275.1| RecA protein [Phascolarctobacterium succinatutens YIT 12067]
Length = 350
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+++ALD AM+ I FGKGS+ LG A + +E P+G L+LD+ALG GG+P+GR++E
Sbjct: 4 DKKKALDMAMHQIEKDFGKGSIMMLGEASAKMNIEVIPTGALSLDIALGVGGIPRGRVIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAE QK+GG A +DAEHA DP Y++ LGVD+++L++ QPDNGE
Sbjct: 64 IYGPESSGKTTVALHMIAEAQKMGGYAAFIDAEHALDPEYARHLGVDIDDLLISQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 124 QALEIADALVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGLIS 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C IF+NQIR K+GV +GNPE T+GG ALKF+++VR+++R +K+ G++ +G R
Sbjct: 184 KSKCATIFINQIREKVGVMFGNPETTTGGRALKFYSTVRMDVRRIDTLKN--GNDVIGSR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++QAEF+I++G+G+S GC++D +DI+ + GAWYSYGD RLGQG
Sbjct: 242 TRVKVVKNKVAPPFRQAEFDIMYGKGISHEGCLVDLGADLDIINKSGAWYSYGDIRLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSM 412
++K +LR+NP + +EIE +R++
Sbjct: 302 KEKVKDFLRENPEIAQEIEAKIRAV 326
>gi|428297595|ref|YP_007135901.1| protein recA [Calothrix sp. PCC 6303]
gi|428234139|gb|AFY99928.1| Protein recA [Calothrix sp. PCC 6303]
Length = 360
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/328 (59%), Positives = 256/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL + I +FGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 12 KQKALTMVLGQIEKTFGKGTIMRLGDATRMKVETVSTGALTLDLALGGGLPKGRVIEIYG 71
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHA+AE+QK GG A +DAEHA DP+Y+ ALGVD+ NL++ QPD GE AL
Sbjct: 72 PESSGKTTVALHAVAEIQKTGGIAAYIDAEHALDPTYAGALGVDIANLLISQPDTGESAL 131
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN K+G
Sbjct: 132 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKITGNIGKSG 191
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YGNPE T+GG ALK++ASVRL+IR +K KG E+ G RV+V
Sbjct: 192 CTVIFINQLRMKIGVSYGNPETTTGGNALKYYASVRLDIRRIQTLK--KGTEEFGNRVKV 249
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS +GC++D AE I+ RKGAWYSY + QGRD
Sbjct: 250 KVAKNKVAPPFRIAEFDIIFGKGVSTIGCLVDLAEETGILTRKGAWYSYKGDNISQGRDN 309
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++Y+ + P L EEI+K+V+ + G+V
Sbjct: 310 AIKYVEEKPELAEEIKKLVKEKLDMGAV 337
>gi|428201208|ref|YP_007079797.1| protein RecA [Pleurocapsa sp. PCC 7327]
gi|427978640|gb|AFY76240.1| protein RecA [Pleurocapsa sp. PCC 7327]
Length = 353
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/330 (62%), Positives = 266/330 (80%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL +N I +FGKGS+ RLG A VET SG LTLDLALGGGLPKGR++EI+
Sbjct: 9 DKEKALSLVLNQIERNFGKGSIMRLGDASQMRVETISSGSLTLDLALGGGLPKGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ALGVD++NL++ QPD GE+A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEALGVDIQNLLISQPDTGEVA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS +D+I VDSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN SK+
Sbjct: 129 LEIVDQLVRSTVVDIIVVDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNISKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GCT+IFLNQ+R KIGV YGNPEVT+GG ALKF+ASVRL+IR +K KG+E + G RV
Sbjct: 189 GCTVIFLNQLRQKIGVTYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGNEGEYGNRV 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GC++D AE ++V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISRVGCLIDLAEQTNVVNRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL +NP + ++E+ VR + G+V
Sbjct: 307 DNAVKYLEENPEIANKVEQQVREKLDIGAV 336
>gi|220928127|ref|YP_002505036.1| recA protein [Clostridium cellulolyticum H10]
gi|219998455|gb|ACL75056.1| recA protein [Clostridium cellulolyticum H10]
Length = 347
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/325 (59%), Positives = 251/325 (77%), Gaps = 3/325 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
L++++AL+ A+ I FGKG+V +LG VE P+G ++LDLALG GG+P+GRIV
Sbjct: 1 MLEKRKALEMALGQIEKQFGKGAVMKLGENSHMNVEIIPTGSMSLDLALGVGGVPRGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+K LGVD+ENLIV QPD G
Sbjct: 61 EIFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGAID+I VDSV+AL P+AEI+GE+G IGLQARLMSQALRK++G
Sbjct: 121 EQALEITEALVRSGAIDVIVVDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGVI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ T IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK + +E VG
Sbjct: 181 SKSRTTAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIEAIK--QSNEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P+K+AEF+I++GEG+S+ G +LD A M+IV + GAW+SY QR+GQ
Sbjct: 239 RTRVKVVKNKVAPPFKEAEFDIVYGEGISREGSILDIAVNMEIVNKSGAWFSYNSQRIGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A QYL++NP + EIEK+VRS
Sbjct: 299 GRENAKQYLKENPAMCSEIEKLVRS 323
>gi|94496514|ref|ZP_01303090.1| recA protein [Sphingomonas sp. SKA58]
gi|94423874|gb|EAT08899.1| recA protein [Sphingomonas sp. SKA58]
Length = 384
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/330 (58%), Positives = 252/330 (76%), Gaps = 3/330 (0%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGL 140
DS + +DRQ+ALDAA+ I+ +FGKGS +LGS +E+ +G L LD+ALG GGL
Sbjct: 36 DSKKTGNMDRQKALDAALAQIDRAFGKGSAMKLGSREKIEIESISTGSLGLDIALGIGGL 95
Query: 141 PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIV 200
PKGRI+EI+GPESSGKTTL LHAIAE QK GG A VDAEHA DP+Y+K LGVD++ LIV
Sbjct: 96 PKGRIIEIYGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPAYAKKLGVDIDELIV 155
Query: 201 CQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 260
QPD GE ALEI D + RS AID++ +DSV+AL PRAEIEGE+G +GLQARLMSQALR
Sbjct: 156 SQPDTGEQALEIVDTLVRSNAIDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALR 215
Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 320
K++G+ S++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK
Sbjct: 216 KLTGSISRSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR-- 273
Query: 321 DEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYG 380
D+ VG RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + GAW+SY
Sbjct: 274 DDIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGELLDIGVKAGLVEKSGAWFSYD 333
Query: 381 DQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A YL+++P L + +EK +R
Sbjct: 334 SIRIGQGRENAKTYLKEHPELADRLEKAIR 363
>gi|67926019|ref|ZP_00519282.1| RecA bacterial DNA recombination protein [Crocosphaera watsonii WH
8501]
gi|416396693|ref|ZP_11686476.1| RecA protein [Crocosphaera watsonii WH 0003]
gi|67852132|gb|EAM47628.1| RecA bacterial DNA recombination protein [Crocosphaera watsonii WH
8501]
gi|357262947|gb|EHJ12020.1| RecA protein [Crocosphaera watsonii WH 0003]
Length = 358
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/330 (62%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL +N I +FGKGS+ RLG A VET +G LTLDLALGGGLP GRIVEI+
Sbjct: 9 DKEKALGLVLNQIERNFGKGSIMRLGDAARMKVETISTGALTLDLALGGGLPMGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD++NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSGALGVDIDNLLVAQPDTGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSAAVDVVVVDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ +EF+IIFG G+S++GCMLD AE D+VVRKGAWYSY + QGR
Sbjct: 247 KVKVAKNKVAPPFRISEFDIIFGSGISQMGCMLDLAEQCDVVVRKGAWYSYNGDNISQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL +NP + E IE+ VR + GS+
Sbjct: 307 DNAVKYLEENPKIAETIEQQVREKLELGSL 336
>gi|154488807|ref|ZP_02029656.1| hypothetical protein BIFADO_02115 [Bifidobacterium adolescentis
L2-32]
gi|154082944|gb|EDN81989.1| RecA protein [Bifidobacterium adolescentis L2-32]
Length = 380
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/322 (59%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
RQ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 23 RQAALDTALAQVEKSFGKGSAMRLGDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEIY 82
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++LIV QPDNGE A
Sbjct: 83 GPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQA 142
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 143 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 202
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR++IR IK+ GDE VG R +
Sbjct: 203 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRMDIRRIQTIKN--GDEAVGNRTK 260
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+SK G +LD A ++V + G+W++Y +LGQGR+
Sbjct: 261 VKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQANVVKKSGSWFTYEGDQLGQGRE 320
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
Q+L+DNP L EEIE V++
Sbjct: 321 NVRQFLKDNPELTEEIENKVKA 342
>gi|389876987|ref|YP_006370552.1| recombinase A [Tistrella mobilis KA081020-065]
gi|388527771|gb|AFK52968.1| RecA protein [Tistrella mobilis KA081020-065]
Length = 366
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/323 (58%), Positives = 251/323 (77%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+Q+AL+AA+ I +FGKGSV +LG V+ P+G L LD+ALG GG P+GR++E
Sbjct: 19 MDKQKALEAALGQIERAFGKGSVMKLGQQEKVDVDVVPTGSLALDIALGVGGFPRGRVIE 78
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE Q+ GG VDAEHA DPSY++ LGV+++ L++ QPD GE
Sbjct: 79 IYGPESSGKTTLALHAIAEAQRGGGTCAFVDAEHALDPSYARKLGVNIDELVISQPDTGE 138
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+ALTP+AE+EGE+G +GLQARLMSQALRK++G+ S
Sbjct: 139 QALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGDSHVGLQARLMSQALRKLTGSIS 198
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G +K + DE VG +
Sbjct: 199 RSRCVVIFINQIRMKIGVMYGSPETTAGGNALKFYASVRLDIRRIGAVK--ERDEVVGSQ 256
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++Q EF+I++GEGVSK G ++D IV + G+WYSYGDQR+GQG
Sbjct: 257 TRVKVVKNKVAPPFRQVEFDIMYGEGVSKTGELIDMGVKQGIVEKSGSWYSYGDQRIGQG 316
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +LRDNP + E+E VR
Sbjct: 317 RENAKTFLRDNPEIAREVENRVR 339
>gi|119026042|ref|YP_909887.1| recombinase A [Bifidobacterium adolescentis ATCC 15703]
gi|118765626|dbj|BAF39805.1| protein recA (Recombinase A) [Bifidobacterium adolescentis ATCC
15703]
Length = 394
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/322 (59%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
RQ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 37 RQAALDTALAQVEKSFGKGSAMRLGDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEIY 96
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++LIV QPDNGE A
Sbjct: 97 GPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQA 156
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 157 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 216
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR++IR IK+ GDE VG R +
Sbjct: 217 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRMDIRRIQTIKN--GDEAVGNRTK 274
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+SK G +LD A ++V + G+W++Y +LGQGR+
Sbjct: 275 VKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQANVVKKSGSWFTYEGDQLGQGRE 334
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
Q+L+DNP L EEIE V++
Sbjct: 335 NVRQFLKDNPELTEEIENKVKA 356
>gi|87199296|ref|YP_496553.1| recombinase A [Novosphingobium aromaticivorans DSM 12444]
gi|87134977|gb|ABD25719.1| recA protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/330 (59%), Positives = 251/330 (76%), Gaps = 3/330 (0%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGL 140
+ G ++ +DRQ+ALDAA+ I+ +FGKGS RLGS VE +G L LD+ALG GGL
Sbjct: 9 EEGKTKDMDRQKALDAALAQIDRAFGKGSAMRLGSKEAMQVEAVSTGSLGLDIALGIGGL 68
Query: 141 PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIV 200
P+GRI+EI+GPESSGKTTLALHAIAE QK GG A +DAEHA DP Y++ LGVD++NLIV
Sbjct: 69 PRGRIIEIYGPESSGKTTLALHAIAEAQKGGGTAAFIDAEHALDPVYARKLGVDIDNLIV 128
Query: 201 CQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 260
QPD GE ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALR
Sbjct: 129 SQPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALR 188
Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 320
K++G+ S++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK
Sbjct: 189 KLTGSISRSRCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR-- 246
Query: 321 DEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYG 380
DE VG RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + GAW+SY
Sbjct: 247 DEIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSGAWFSYD 306
Query: 381 DQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A +LR+NP + +E +R
Sbjct: 307 SIRIGQGRENAKNFLRENPEVCSRLEAAIR 336
>gi|169836086|ref|ZP_02869274.1| recA protein [candidate division TM7 single-cell isolate TM7a]
Length = 347
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/320 (58%), Positives = 246/320 (76%), Gaps = 2/320 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+ +AL+ AM I FG GS+ +LG A VE PSG L+LDLALGGG PKGRI+EI+G
Sbjct: 21 KMKALNLAMEQITKQFGDGSIMKLGDAKKVDVELLPSGSLSLDLALGGGYPKGRIIEIYG 80
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTL LHAIAE+QK GG A +DAEHA DPSY++ LGVD ENL++ QPDNGE AL
Sbjct: 81 PESSGKTTLTLHAIAEIQKQGGTAAFIDAEHALDPSYARKLGVDTENLLIAQPDNGEQAL 140
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EIA+ + RS A+DLI VDSV+ALTP+AEI+G++G +GLQARLMSQALRK++G +K+
Sbjct: 141 EIAETLVRSNAVDLIVVDSVAALTPQAEIDGDMGDSHMGLQARLMSQALRKLTGIINKSK 200
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
T+IF+NQIR KIGV +GNPE T+GG ALKF+ASVR++IR TG+IK GD+ +G R +V
Sbjct: 201 ATVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMDIRRTGQIKV--GDDIIGNRTKV 258
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
++ K+K++ P++ AEF+I++ EG+SK G +LD A +V + GA+Y YG + +GQGRDK
Sbjct: 259 KIVKNKIAPPFRLAEFDIMYNEGISKTGDILDLAAQYGVVEKSGAFYKYGGETIGQGRDK 318
Query: 391 ALQYLRDNPLLQEEIEKVVR 410
+L+DNP + EI+ VR
Sbjct: 319 TKTFLKDNPEIMSEIDNKVR 338
>gi|23465975|ref|NP_696578.1| recombinase A [Bifidobacterium longum NCC2705]
gi|239621261|ref|ZP_04664292.1| protein recA [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|30316236|sp|Q8G4G9.1|RECA_BIFLO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|23326690|gb|AAN25214.1| RecA protein [Bifidobacterium longum NCC2705]
gi|239515722|gb|EEQ55589.1| protein recA [Bifidobacterium longum subsp. infantis CCUG 52486]
Length = 397
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 252/330 (76%), Gaps = 5/330 (1%)
Query: 85 DSRFLD--RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
D LD R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLP
Sbjct: 15 DKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLP 74
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV
Sbjct: 75 KGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVS 134
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK
Sbjct: 135 QPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 194
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
M+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GD
Sbjct: 195 MTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GD 252
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E VG R RV+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y
Sbjct: 253 EAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEG 312
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+LGQGR+K Q+L+DNP + EEIE V++
Sbjct: 313 DQLGQGREKVRQFLKDNPAITEEIENKVKA 342
>gi|56751174|ref|YP_171875.1| recombinase A [Synechococcus elongatus PCC 6301]
gi|81299159|ref|YP_399367.1| recombinase A [Synechococcus elongatus PCC 7942]
gi|76363345|sp|Q5N2W5.1|RECA_SYNP6 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123741845|sp|Q31RD9.1|RECA_SYNE7 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56686133|dbj|BAD79355.1| recombination protein RecA [Synechococcus elongatus PCC 6301]
gi|81168040|gb|ABB56380.1| RecA protein [Synechococcus elongatus PCC 7942]
Length = 356
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL+ ++ I +FGKG++ RLG A VET +G LTLDLALGGGLPKGRI+E++
Sbjct: 11 EKEKALNLVLSQIERNFGKGAIMRLGDAARLRVETISTGALTLDLALGGGLPKGRIIEVY 70
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ ++GVD++NL++ QPD GEMA
Sbjct: 71 GPESSGKTTLTLHAIAEVQKQGGIAAFVDAEHALDPVYATSVGVDIDNLLISQPDTGEMA 130
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMSQA+RK++GN K+
Sbjct: 131 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDAQVGLQARLMSQAMRKITGNIGKS 190
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG E+ G R +
Sbjct: 191 GCTVIFLNQLRQKIGVTYGSPETTTGGQALKFYASVRLDIRRIQTLK--KGTEEYGTRAK 248
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S LGC++D AE +++RKGAWYSY +GQGRD
Sbjct: 249 VKVVKNKVAPPFRIAEFDILFGKGISTLGCLVDLAEETGVILRKGAWYSYNGDNIGQGRD 308
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L ++P + +E+ VR ++ G+
Sbjct: 309 NTITHLEEHPDFRATVEQQVREKLALGA 336
>gi|296454323|ref|YP_003661466.1| recA protein [Bifidobacterium longum subsp. longum JDM301]
gi|296183754|gb|ADH00636.1| recA protein [Bifidobacterium longum subsp. longum JDM301]
Length = 397
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 252/330 (76%), Gaps = 5/330 (1%)
Query: 85 DSRFLD--RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
D LD R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLP
Sbjct: 15 DKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLP 74
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV
Sbjct: 75 KGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVS 134
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK
Sbjct: 135 QPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 194
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
M+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GD
Sbjct: 195 MTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GD 252
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E VG R RV+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y
Sbjct: 253 EAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEG 312
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+LGQGR+K Q+L+DNP + EEIE V++
Sbjct: 313 DQLGQGREKVRQFLKDNPAITEEIENKVKA 342
>gi|212715625|ref|ZP_03323753.1| hypothetical protein BIFCAT_00524 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660992|gb|EEB21567.1| hypothetical protein BIFCAT_00524 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 394
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/322 (59%), Positives = 247/322 (76%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
RQ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 23 RQAALDTALAQVEKSFGKGSAMRLGDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEIY 82
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++LIV QPDNGE A
Sbjct: 83 GPESSGKTTLALHVVANAQKSGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQA 142
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 143 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 202
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF++SVR++IR IK+ GDE VG R +
Sbjct: 203 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYSSVRMDIRRIQTIKN--GDEAVGNRTK 260
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+SK G +LD A +++V + G+W++Y +LGQGR+
Sbjct: 261 VKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQVNVVKKSGSWFTYDGDQLGQGRE 320
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
Q+L+DNP L EEIE V++
Sbjct: 321 NVRQFLKDNPELTEEIENKVKA 342
>gi|347527908|ref|YP_004834655.1| recombinase A [Sphingobium sp. SYK-6]
gi|345136589|dbj|BAK66198.1| protein RecA [Sphingobium sp. SYK-6]
Length = 364
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/328 (58%), Positives = 251/328 (76%), Gaps = 3/328 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++RQ+AL+AA+ I+ +FGKGS RLGS +E +G L LD+ALG GGLP+GRI+E
Sbjct: 22 MERQKALEAALAQIDRAFGKGSAMRLGSKETMQIEAISTGSLGLDIALGIGGLPRGRIIE 81
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG A +DAEHA DP Y+K LGV+++ LIV QPD GE
Sbjct: 82 IYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKLGVNIDELIVSQPDTGE 141
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RS AID++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ S
Sbjct: 142 QALEIADTLVRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSIS 201
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE G
Sbjct: 202 RSRCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR--DEITGNA 259
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD I+ + GAW+SY R+GQG
Sbjct: 260 TRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGIIEKSGAWFSYDSVRIGQG 319
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSD 415
R+ A Q+LR+NP + ++E+ +R+ D
Sbjct: 320 RENAKQFLRENPEMTTKLERAIRARTED 347
>gi|326791550|ref|YP_004309371.1| recA protein [Clostridium lentocellum DSM 5427]
gi|326542314|gb|ADZ84173.1| recA protein [Clostridium lentocellum DSM 5427]
Length = 353
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 256/324 (79%), Gaps = 5/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+ ++ALDAA++ I FGKGS+ +LG A V TFP+G L+LD+ALG GGLPKGRIVE+
Sbjct: 4 ESKKALDAAISQIQKQFGKGSIMKLGEATDTNVHTFPTGSLSLDIALGVGGLPKGRIVEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ LH IAEVQK GG A +DAEHA DPSY+ LGV+++ L + QPDNGE
Sbjct: 64 YGPESSGKTTVTLHMIAEVQKQGGIAAFIDAEHALDPSYAAKLGVNIDELYISQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ M RSGAID+I VDSV+AL PRAEIEG++G +GLQARLMSQALRK++G +K
Sbjct: 124 ALEIAETMVRSGAIDIIVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKLTGVINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ CT+IF+NQ+R K+GV +G+ E T+GG ALKF+AS+RL++R KI+++K +E +G R
Sbjct: 184 SKCTVIFINQLREKVGVMFGSNETTTGGRALKFYASIRLDVR---KIETLKQSNEFIGSR 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++QAEF+I++GEG+SK G +LD A +DIV + GAWYSYGD RLGQG
Sbjct: 241 TRVKVVKNKVAPPFQQAEFDIMYGEGISKEGDVLDLATNIDIVNKSGAWYSYGDLRLGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A Y++++P L EIE VRS
Sbjct: 301 RENAKIYIKEHPELLLEIENKVRS 324
>gi|398386042|ref|ZP_10544052.1| protein RecA [Sphingobium sp. AP49]
gi|397718974|gb|EJK79549.1| protein RecA [Sphingobium sp. AP49]
Length = 357
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/330 (59%), Positives = 250/330 (75%), Gaps = 3/330 (0%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGL 140
DS + +DRQ+AL+AA+ I+ +FGKGS +LGS +E +G L LD+ALG GGL
Sbjct: 9 DSKKTGTMDRQKALEAALAQIDRAFGKGSAMKLGSREKIEIEAISTGSLGLDIALGIGGL 68
Query: 141 PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIV 200
PKGRI+EI+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGVD++ LIV
Sbjct: 69 PKGRIIEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPGYAKKLGVDIDELIV 128
Query: 201 CQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 260
QPD GE ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALR
Sbjct: 129 SQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALR 188
Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 320
K++G+ S++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK
Sbjct: 189 KLTGSISRSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR-- 246
Query: 321 DEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYG 380
D+ VG RV+V K+KV+ P+KQ EF+I++GEGVSKLG +LD IV + G+W+SY
Sbjct: 247 DDIVGNTTRVKVVKNKVAPPFKQVEFDIMYGEGVSKLGEILDIGVKAGIVEKSGSWFSYD 306
Query: 381 DQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A YL+++P + +EK +R
Sbjct: 307 SVRIGQGRENAKTYLKEHPEMAVRLEKAIR 336
>gi|158320574|ref|YP_001513081.1| recA protein [Alkaliphilus oremlandii OhILAs]
gi|158140773|gb|ABW19085.1| recA protein [Alkaliphilus oremlandii OhILAs]
Length = 352
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 251/323 (77%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+++++ALD A++ I FGKGS+ +LG +E+ +G + LD+ALG GG+PKGRI+E
Sbjct: 1 MEKKKALDMALSQIEKQFGKGSIMKLGEDAKLNLESVSTGSIGLDVALGIGGIPKGRIIE 60
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT++LH IAE QK GG A +DAEHA DPSY+K LGVD+ENLIV QPD GE
Sbjct: 61 IYGPESSGKTTVSLHVIAETQKRGGIAAFIDAEHALDPSYAKNLGVDIENLIVSQPDTGE 120
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G+ S
Sbjct: 121 QALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLAGSIS 180
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ IF+NQ+R KIGV +G PE T+GG ALKF+ASVRL++R IK +G++ VG R
Sbjct: 181 KSNTIAIFINQLREKIGVMFGTPETTTGGRALKFYASVRLDVRKVDSIK--QGNDVVGNR 238
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++GEG+SK G +LD A +DIV + GAWYSYG+ RLGQG
Sbjct: 239 TRVKVVKNKVAAPFKQAEFDIMYGEGISKAGDILDVAASLDIVTKSGAWYSYGEHRLGQG 298
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ Q+L++NP + EIE +R
Sbjct: 299 RENGKQFLKENPEISLEIENKIR 321
>gi|409400599|ref|ZP_11250623.1| recombinase A [Acidocella sp. MX-AZ02]
gi|409130485|gb|EKN00250.1| recombinase A [Acidocella sp. MX-AZ02]
Length = 364
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 251/328 (76%), Gaps = 4/328 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GGLPKGRIV 146
L++ +ALDAAM I +FGKGS+ R+G+ GG +E SG L LDLALG GGLP+GR++
Sbjct: 21 LEKNKALDAAMAQIERAFGKGSIMRMGAKGGNEAIEVISSGSLGLDLALGIGGLPRGRVI 80
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHA+AE QK GG VDAEHA DP Y++ LGVDV+NL++ QPD G
Sbjct: 81 EIYGPESSGKTTLALHAVAEAQKRGGVCAFVDAEHALDPIYARKLGVDVDNLLISQPDTG 140
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E LEIAD + RSG+ID++ +DSV+AL PRAE+EGE+G +GL ARLMSQALRK++G+
Sbjct: 141 EQGLEIADTLVRSGSIDVLVIDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKITGSV 200
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+++ TLIFLNQIR KIGV +GNPE T+GG ALKF++S+R+EIR TG IK + DE G
Sbjct: 201 ARSNTTLIFLNQIRLKIGVMFGNPETTTGGNALKFYSSIRMEIRRTGSIK--ERDEVTGN 258
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
VRV+V K+K++ P++Q EF+I+FGEG+SK G ++D +V + GAW+SY QR+GQ
Sbjct: 259 HVRVKVVKNKLAPPFRQVEFDIMFGEGISKSGELVDLGVKAGVVEKSGAWFSYDSQRIGQ 318
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMS 414
GR+ A Q+LRDNP + E IEK +R S
Sbjct: 319 GRENAKQFLRDNPKVAESIEKKIRDQSS 346
>gi|443312792|ref|ZP_21042407.1| protein RecA [Synechocystis sp. PCC 7509]
gi|442777248|gb|ELR87526.1| protein RecA [Synechocystis sp. PCC 7509]
Length = 360
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/326 (60%), Positives = 255/326 (78%), Gaps = 2/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL+ + I SFGKG++ RLG A VET SG LTLDLALGGGLPKGR++EI+G
Sbjct: 11 KQKALNLVLTQIERSFGKGAIMRLGDATRMKVETISSGALTLDLALGGGLPKGRVIEIYG 70
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLALHA+AEVQ+ GG A VDAEHA DP+Y+ ALGVD+ NL+V QPD GE AL
Sbjct: 71 PESSGKTTLALHALAEVQRNGGVAAFVDAEHALDPTYAAALGVDIANLLVSQPDTGESAL 130
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN K+G
Sbjct: 131 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDVHVGLQARLMSQALRKITGNIGKSG 190
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IFLNQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 191 CTVIFLNQLRLKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEFGNRVKV 248
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+G+S LGC++D AE ++VRKGAWYSY + + QGRD
Sbjct: 249 KVAKNKVAPPFRIAEFDIIFGKGISTLGCIVDLAEETGVIVRKGAWYSYNGENISQGRDN 308
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDG 416
A++YL + P + E +++ VR + G
Sbjct: 309 AIKYLEEKPEIAEIVQQQVRQKLEMG 334
>gi|334142450|ref|YP_004535658.1| recombination protein RecA [Novosphingobium sp. PP1Y]
gi|359401185|ref|ZP_09194156.1| recombination protein RecA [Novosphingobium pentaromativorans
US6-1]
gi|333940482|emb|CCA93840.1| recombination protein RecA [Novosphingobium sp. PP1Y]
gi|357597434|gb|EHJ59181.1| recombination protein RecA [Novosphingobium pentaromativorans
US6-1]
Length = 358
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 249/328 (75%), Gaps = 3/328 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
D +DRQ+ALDAA+ I+ +FGKGS +LGS VE +G L LD+ALG GGLPKG
Sbjct: 13 DKDSMDRQKALDAALAQIDRAFGKGSAMKLGSKETMQVEAISTGSLGLDIALGVGGLPKG 72
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
R++E++GPESSGKTTLALH IAE QK GG A +DAEHA DP Y+K LGVD++ LIV QP
Sbjct: 73 RVIEVYGPESSGKTTLALHVIAEAQKAGGTAAFIDAEHALDPVYAKKLGVDIDELIVSQP 132
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++
Sbjct: 133 DTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLT 192
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
G+ +++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE
Sbjct: 193 GSINRSKCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR--DEI 250
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
+G RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD IV + GAW+SY R
Sbjct: 251 IGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGIVEKSGAWFSYDSIR 310
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+GQGR+ + YLR+NP + E +EK +R+
Sbjct: 311 IGQGRENSKNYLRENPEVCERLEKAIRA 338
>gi|384196826|ref|YP_005582570.1| recombinase A [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333110211|gb|AEF27227.1| RecA protein [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 394
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 23 RKAALDTALAQVEKSFGKGSAMRLGDQPVQNVEVIPTGSLALDMALGIGGLPKGRIVEIY 82
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV QPDNGE A
Sbjct: 83 GPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQA 142
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 143 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 202
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GDE VG R R
Sbjct: 203 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GDEAVGNRTR 260
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y +LGQGR+
Sbjct: 261 VKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGRE 320
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
K Q+L+DNP + EEIE V++
Sbjct: 321 KVRQFLKDNPAITEEIENKVKA 342
>gi|358066402|ref|ZP_09152929.1| RecA protein [Clostridium hathewayi WAL-18680]
gi|356695453|gb|EHI57085.1| RecA protein [Clostridium hathewayi WAL-18680]
Length = 381
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 259/324 (79%), Gaps = 6/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ I ++GKGSV +LG +G + +ET P+G L+LD+ALG GG+PKGR++E
Sbjct: 5 DKMKALDAALTQIEKAYGKGSVMKLGDSGVNMNIETVPTGSLSLDIALGLGGIPKGRVIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPDNGE
Sbjct: 65 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+G++G +GLQARLMSQ LRK++G+ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQGLRKLTGHIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
K+ CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL++R KI+++K G E +G
Sbjct: 185 KSNCTVIFINQLREKIGVMFGNPETTTGGRALKFYASVRLDVR---KIETLKQGGEMIGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
RVR++V K+K++ P+K+AEF+I+FG+G+SK G +LD A DIV + GAWY+YG ++GQ
Sbjct: 242 RVRIKVVKNKIAPPFKEAEFDIMFGKGISKEGDVLDLAAKEDIVEKSGAWYAYGGAKIGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A YLRDNP + +EIE VR
Sbjct: 302 GRENAKIYLRDNPAVCQEIEDKVR 325
>gi|339479391|gb|ABE95859.1| RecA protein [Bifidobacterium breve UCC2003]
Length = 392
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 23 RKAALDTALAQVEKSFGKGSAMRLGDQPVQNVEVIPTGSLALDMALGIGGLPKGRIVEIY 82
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV QPDNGE A
Sbjct: 83 GPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQA 142
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 143 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 202
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GDE VG R R
Sbjct: 203 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GDEAVGNRTR 260
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y +LGQGR+
Sbjct: 261 VKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGRE 320
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
K Q+L+DNP + EEIE V++
Sbjct: 321 KVRQFLKDNPAITEEIENKVKA 342
>gi|11387040|sp|Q9S660.1|RECA_BIFBR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|4416209|gb|AAD20261.1| RecA protein [Bifidobacterium breve]
Length = 392
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 23 RKAALDTALAQVEKSFGKGSAMRLGDQPVQNVEVIPTGSLALDMALGIGGLPKGRIVEIY 82
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV QPDNGE A
Sbjct: 83 GPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQA 142
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 143 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 202
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GDE VG R R
Sbjct: 203 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GDEAVGNRTR 260
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y +LGQGR+
Sbjct: 261 VKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGRE 320
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
K Q+L+DNP + EEIE V++
Sbjct: 321 KVRQFLKDNPAITEEIENKVKA 342
>gi|419850084|ref|ZP_14373100.1| RecA protein [Bifidobacterium longum subsp. longum 35B]
gi|419853863|ref|ZP_14376663.1| RecA protein [Bifidobacterium longum subsp. longum 2-2B]
gi|386406437|gb|EIJ21444.1| RecA protein [Bifidobacterium longum subsp. longum 2-2B]
gi|386410139|gb|EIJ24941.1| RecA protein [Bifidobacterium longum subsp. longum 35B]
Length = 418
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 252/330 (76%), Gaps = 5/330 (1%)
Query: 85 DSRFLD--RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
D LD R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLP
Sbjct: 36 DKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLP 95
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV
Sbjct: 96 KGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVS 155
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK
Sbjct: 156 QPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 215
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
M+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GD
Sbjct: 216 MTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GD 273
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E VG R RV+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y
Sbjct: 274 EAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEG 333
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+LGQGR+K Q+L+DNP + EEIE V++
Sbjct: 334 DQLGQGREKVRQFLKDNPAITEEIENKVKA 363
>gi|420236829|ref|ZP_14741306.1| recombinase A [Parascardovia denticolens IPLA 20019]
gi|391879932|gb|EIT88432.1| recombinase A [Parascardovia denticolens IPLA 20019]
Length = 373
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/333 (57%), Positives = 254/333 (76%), Gaps = 5/333 (1%)
Query: 80 SSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-G 138
+ D+ ++ RQ ALD A+ + +FGKGS RLG VE P+G L LDLALG G
Sbjct: 4 TKDTASAQDARRQAALDTALAQVEKTFGKGSAMRLGDKPVQHVEVIPTGSLALDLALGIG 63
Query: 139 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENL 198
GLP+GRIVEI+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y++ LGVD ++L
Sbjct: 64 GLPRGRIVEIYGPESSGKTTIALHAVANAQKAGGVAAFIDAEHALDPEYARKLGVDTDSL 123
Query: 199 IVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 258
I+ QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEI+GE+G +GLQARLMSQA
Sbjct: 124 IISQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQA 183
Query: 259 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318
LRKM+G S++ T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR +I+++
Sbjct: 184 LRKMTGALSQSNTTAIFINQLREKIGVMFGNPETTTGGKALKFYASVRLDIR---RIQTL 240
Query: 319 K-GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
K GDE VG R RV+V K+K++ P+K AEF+I++GEGVS+ G +LD +D+V + G+W+
Sbjct: 241 KNGDEAVGNRTRVKVVKNKMAPPFKSAEFDILYGEGVSREGSILDMGLALDLVKKSGSWF 300
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
+Y +LGQGR+KA Q+L+DNP L +EIE V+
Sbjct: 301 TYDGDQLGQGREKARQFLKDNPQLADEIETKVK 333
>gi|334345425|ref|YP_004553977.1| protein recA [Sphingobium chlorophenolicum L-1]
gi|334102047|gb|AEG49471.1| Protein recA [Sphingobium chlorophenolicum L-1]
Length = 357
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/330 (58%), Positives = 253/330 (76%), Gaps = 3/330 (0%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGL 140
DS + +DRQ+AL+AA++ I+ +FGKGS +LGS +E +G L LD+ALG GGL
Sbjct: 9 DSKKTGTMDRQKALEAALSQIDRAFGKGSAMKLGSREKIEIEAISTGSLGLDIALGIGGL 68
Query: 141 PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIV 200
P+GRI+EI+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGVD++ LIV
Sbjct: 69 PRGRIIEIYGPESSGKTTLALHAIAEAQKTGGIAAFVDAEHALDPGYAKKLGVDIDELIV 128
Query: 201 CQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 260
QPD GE ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALR
Sbjct: 129 SQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALR 188
Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 320
K++G+ S++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK
Sbjct: 189 KLTGSISRSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR-- 246
Query: 321 DEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYG 380
++ VG RV+V K+KV+ P+KQ EF+I++GEGVSK+G +LD +V + GAW+SY
Sbjct: 247 EDIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGVSKIGELLDIGVKTGLVEKSGAWFSYD 306
Query: 381 DQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A YL+++P + +++EK +R
Sbjct: 307 SVRIGQGRENAKTYLKEHPEMADKLEKAIR 336
>gi|282900004|ref|ZP_06307964.1| RecA DNA recombination protein [Cylindrospermopsis raciborskii
CS-505]
gi|281195102|gb|EFA70039.1| RecA DNA recombination protein [Cylindrospermopsis raciborskii
CS-505]
Length = 357
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/328 (59%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALSMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQ+ GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GE L
Sbjct: 70 PESSGKTTVALHAIAEVQRNGGIAAFVDAEHALDPTYAGALGVDIENLLVSQPDTGEAGL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGSDEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE +++RKGAWYS+ + + QGRD
Sbjct: 248 KVAKNKVAPPFRVAEFDIIFGKGVSTLGCLVDLAEETGVLIRKGAWYSHNGENISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + E+I++ VR+ + G+V
Sbjct: 308 AIKYLEEKSDFAEKIKEQVRAKLDQGAV 335
>gi|384201328|ref|YP_005587075.1| recombinase RecA [Bifidobacterium longum subsp. longum KACC 91563]
gi|291516744|emb|CBK70360.1| RecA protein [Bifidobacterium longum subsp. longum F8]
gi|338754335|gb|AEI97324.1| recombinase RecA [Bifidobacterium longum subsp. longum KACC 91563]
Length = 418
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 252/330 (76%), Gaps = 5/330 (1%)
Query: 85 DSRFLD--RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
D LD R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLP
Sbjct: 36 DKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLP 95
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV
Sbjct: 96 KGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVS 155
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK
Sbjct: 156 QPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 215
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
M+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GD
Sbjct: 216 MTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GD 273
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E VG R RV+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y
Sbjct: 274 EAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEG 333
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+LGQGR+K Q+L+DNP + EEIE V++
Sbjct: 334 DQLGQGREKVRQFLKDNPAITEEIENKVKA 363
>gi|376261050|ref|YP_005147770.1| protein RecA [Clostridium sp. BNL1100]
gi|373945044|gb|AEY65965.1| protein RecA [Clostridium sp. BNL1100]
Length = 348
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/325 (58%), Positives = 251/325 (77%), Gaps = 3/325 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
L++++AL+ A+ I FGKG+V +LG +E+ P+G ++LDLALG GG+P+GRIV
Sbjct: 1 MLEKKKALEMALGQIEKQFGKGAVMKLGENSHMNIESIPTGSMSLDLALGVGGVPRGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+K LGVD+ENLIV QPD G
Sbjct: 61 EIFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGAID+I VDSV+AL P+AEI+GE+G IGLQARLMSQALRK++G
Sbjct: 121 EQALEITEALVRSGAIDVIVVDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGVI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ T IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK + +E VG
Sbjct: 181 SKSKTTAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIEAIK--QANEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P+K+AEF+I++GEG+S+ G +LD A MDIV + GAW+SY QR+GQ
Sbjct: 239 RTRVKVVKNKVAPPFKEAEFDIVYGEGISREGSILDIAVSMDIVNKSGAWFSYNGQRIGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A QYL++N + EIEK++RS
Sbjct: 299 GRENAKQYLKENLAMCSEIEKLIRS 323
>gi|213691840|ref|YP_002322426.1| recombinase A [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|384198983|ref|YP_005584726.1| recombinase RecA [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
gi|213523301|gb|ACJ52048.1| recA protein [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|320457935|dbj|BAJ68556.1| recombinase RecA [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
Length = 418
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 252/330 (76%), Gaps = 5/330 (1%)
Query: 85 DSRFLD--RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
D LD R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLP
Sbjct: 36 DKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLP 95
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV
Sbjct: 96 KGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVS 155
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK
Sbjct: 156 QPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 215
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
M+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GD
Sbjct: 216 MTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GD 273
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E VG R RV+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y
Sbjct: 274 EAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEG 333
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+LGQGR+K Q+L+DNP + EEIE V++
Sbjct: 334 DQLGQGREKVRQFLKDNPAITEEIENKVKA 363
>gi|46191337|ref|ZP_00206783.1| COG0468: RecA/RadA recombinase [Bifidobacterium longum DJO10A]
gi|189439147|ref|YP_001954228.1| recombinase A [Bifidobacterium longum DJO10A]
gi|227547654|ref|ZP_03977703.1| recombination protein A [Bifidobacterium longum subsp. longum ATCC
55813]
gi|317482460|ref|ZP_07941477.1| recA bacterial DNA recombination protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322689410|ref|YP_004209144.1| recombinase RecA [Bifidobacterium longum subsp. infantis 157F]
gi|322691377|ref|YP_004220947.1| recombinase RecA [Bifidobacterium longum subsp. longum JCM 1217]
gi|419846676|ref|ZP_14369904.1| RecA protein [Bifidobacterium longum subsp. longum 1-6B]
gi|419855760|ref|ZP_14378510.1| RecA protein [Bifidobacterium longum subsp. longum 44B]
gi|189427582|gb|ACD97730.1| RecA/RadA recombinase [Bifidobacterium longum DJO10A]
gi|227211909|gb|EEI79805.1| recombination protein A [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|316916120|gb|EFV37525.1| recA bacterial DNA recombination protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320456233|dbj|BAJ66855.1| recombinase RecA [Bifidobacterium longum subsp. longum JCM 1217]
gi|320460746|dbj|BAJ71366.1| recombinase RecA [Bifidobacterium longum subsp. infantis 157F]
gi|386413456|gb|EIJ28062.1| RecA protein [Bifidobacterium longum subsp. longum 1-6B]
gi|386414983|gb|EIJ29524.1| RecA protein [Bifidobacterium longum subsp. longum 44B]
Length = 418
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 252/330 (76%), Gaps = 5/330 (1%)
Query: 85 DSRFLD--RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
D LD R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLP
Sbjct: 36 DKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLP 95
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV
Sbjct: 96 KGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVS 155
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK
Sbjct: 156 QPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 215
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
M+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GD
Sbjct: 216 MTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GD 273
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E VG R RV+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y
Sbjct: 274 EAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEG 333
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+LGQGR+K Q+L+DNP + EEIE V++
Sbjct: 334 DQLGQGREKVRQFLKDNPAITEEIENKVKA 363
>gi|294013267|ref|YP_003546727.1| recombination protein RecA [Sphingobium japonicum UT26S]
gi|390165991|ref|ZP_10218264.1| recombinase A [Sphingobium indicum B90A]
gi|292676597|dbj|BAI98115.1| recombination protein RecA [Sphingobium japonicum UT26S]
gi|389591150|gb|EIM69125.1| recombinase A [Sphingobium indicum B90A]
Length = 357
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/330 (59%), Positives = 252/330 (76%), Gaps = 3/330 (0%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGL 140
DS + +DRQ+AL+AA++ I+ +FGKGS +LGS +E +G L LD+ALG GGL
Sbjct: 9 DSKKTGTMDRQKALEAALSQIDRAFGKGSAMKLGSREKIEIEAISTGSLGLDIALGIGGL 68
Query: 141 PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIV 200
P+GRIVEI+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGVD++ LIV
Sbjct: 69 PRGRIVEIYGPESSGKTTLALHAIAEAQKAGGIAAFVDAEHALDPGYAKKLGVDIDELIV 128
Query: 201 CQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 260
QPD GE ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALR
Sbjct: 129 SQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALR 188
Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 320
K++G+ S++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK
Sbjct: 189 KLTGSISRSRCLVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR-- 246
Query: 321 DEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYG 380
++ VG RV+V K+KV+ P+KQ EF+I++GEGVSK+G +LD +V + GAW+SY
Sbjct: 247 EDIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGVSKIGELLDIGVKAGLVEKSGAWFSYD 306
Query: 381 DQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A YL+++P + E +EK +R
Sbjct: 307 SVRIGQGRENAKTYLKEHPEMAERLEKAIR 336
>gi|404319018|ref|ZP_10966951.1| recombinase A [Ochrobactrum anthropi CTS-325]
Length = 361
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|90818668|emb|CAJ32639.1| recombinase A [Ochrobactrum tritici]
Length = 355
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|89473577|emb|CAJ34601.1| recombinase A [Ochrobactrum lupini]
gi|89473579|emb|CAJ34602.1| recombinase A [Ochrobactrum anthropi]
gi|90818638|emb|CAJ32624.1| recombinase A [Ochrobactrum anthropi ATCC 49188]
gi|90818640|emb|CAJ32625.1| recombinase A [Ochrobactrum anthropi]
gi|90818642|emb|CAJ32626.1| recombinase A [Ochrobactrum tritici]
gi|90818654|emb|CAJ32632.1| recombinase A [Ochrobactrum anthropi]
gi|90818660|emb|CAJ32635.1| recombinase A [Ochrobactrum anthropi]
gi|90818662|emb|CAJ32636.1| recombinase A [Ochrobactrum anthropi]
gi|90818674|emb|CAJ43897.1| recombinase A [Ochrobactrum anthropi]
gi|343131440|gb|AEL89247.1| recombinase A, partial [Ochrobactrum anthropi]
Length = 355
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|427408934|ref|ZP_18899136.1| protein recA [Sphingobium yanoikuyae ATCC 51230]
gi|425713244|gb|EKU76258.1| protein recA [Sphingobium yanoikuyae ATCC 51230]
Length = 356
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 251/330 (76%), Gaps = 3/330 (0%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGL 140
DS + +DRQ+AL+AA+ I+ +FGKGS +LGS +E+ +G L LD+ALG GGL
Sbjct: 9 DSKKTGTMDRQKALEAALAQIDRAFGKGSAMKLGSREKIEIESISTGSLGLDIALGIGGL 68
Query: 141 PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIV 200
PKGRI+EI+GPESSGKTTL LHAIAE QK GG A VDAEHA DP Y+K LGVD++ LIV
Sbjct: 69 PKGRIIEIYGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVDIDELIV 128
Query: 201 CQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 260
QPD GE ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALR
Sbjct: 129 SQPDTGEQALEIVDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALR 188
Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 320
K++G+ +++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK
Sbjct: 189 KLTGSIARSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR-- 246
Query: 321 DEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYG 380
D+ VG RV+V K+KV+ P+KQ EF+I++GEG+SK+G MLD +V + G+W+SY
Sbjct: 247 DDIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEMLDIGVKAGLVEKSGSWFSYD 306
Query: 381 DQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A +L++NP + + +EK +R
Sbjct: 307 SVRIGQGRENAKTFLKENPEMADRLEKAIR 336
>gi|85374373|ref|YP_458435.1| recombinase A [Erythrobacter litoralis HTCC2594]
gi|84787456|gb|ABC63638.1| recombinase A [Erythrobacter litoralis HTCC2594]
Length = 352
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/323 (59%), Positives = 249/323 (77%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+ALDAA+ I+ +FGKGS +LGS VE +G L LD+ALG GGLPKGR++E
Sbjct: 14 VDRQKALDAALAQIDRAFGKGSAMKLGSKEAMNVEAISTGSLGLDIALGIGGLPKGRVIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+KALGVD++ LIV QPD GE
Sbjct: 74 VYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKALGVDIDELIVSQPDTGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS A+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ +
Sbjct: 134 QALEITDTLVRSNAVDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSIN 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE VG
Sbjct: 194 RSKCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR--DEVVGNS 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD IV + G+W+SY R+GQG
Sbjct: 252 TRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGIVEKSGSWFSYDSIRIGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A YL++NP + +++E +R
Sbjct: 312 RENAKTYLKENPEICDKLEAAIR 334
>gi|334353267|emb|CBZ39225.1| recombinase A [Brucella sp. F60]
gi|334353269|emb|CBZ39226.1| recombinase A [Brucella sp. F965]
Length = 328
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/326 (60%), Positives = 251/326 (76%), Gaps = 4/326 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 4 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 63
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 64 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 123
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 124 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 183
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 184 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 242 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSM 412
GR+ A QYL+DNP + EIE +R M
Sbjct: 302 GRENAKQYLKDNPEVAREIETTLRRM 327
>gi|153009316|ref|YP_001370531.1| recombinase A [Ochrobactrum anthropi ATCC 49188]
gi|166220662|sp|A6X0E8.1|RECA_OCHA4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|151561204|gb|ABS14702.1| recA protein [Ochrobactrum anthropi ATCC 49188]
Length = 361
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|90818656|emb|CAJ32633.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSSCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|291457715|ref|ZP_06597105.1| protein RecA [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291380768|gb|EFE88286.1| protein RecA [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 416
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 45 RKAALDTALAQVEKSFGKGSAMRLGDQPVQNVEVIPTGSLALDMALGIGGLPKGRIVEIY 104
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV QPDNGE A
Sbjct: 105 GPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQA 164
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 165 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 224
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GDE VG R R
Sbjct: 225 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GDEAVGNRTR 282
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y +LGQGR+
Sbjct: 283 VKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGRE 342
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
K Q+L+DNP + EEIE V++
Sbjct: 343 KVRQFLKDNPAITEEIENKVKA 364
>gi|443497939|dbj|BAM76762.1| recombinase A, partial [Ochrobactrum anthropi]
Length = 340
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 6 VDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIV 65
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 66 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 125
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 126 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 185
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 186 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 243
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 244 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 303
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 304 GRENAKQYLKDNPEVAREIETTLR 327
>gi|260892529|ref|YP_003238626.1| recA protein [Ammonifex degensii KC4]
gi|260864670|gb|ACX51776.1| recA protein [Ammonifex degensii KC4]
Length = 346
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/329 (57%), Positives = 248/329 (75%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
DRQ+ L+ + I FGKG++ RLG A VE PSG + LD+ALG GG P+GR+VE
Sbjct: 3 DRQKMLETTLAQIERQFGKGAIMRLGEAASRFQVEVIPSGSIALDVALGIGGFPRGRVVE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTT+ALHA+AE QK+GG A +DAEHA DP Y++ +GVDV+NL+V QPD GE
Sbjct: 63 IFGPESSGKTTVALHAVAEAQKMGGIAAFIDAEHALDPVYAQRVGVDVDNLLVSQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGA+D+I VDSV+AL PRAE+EGE+G +GLQARLMSQALRK++G +
Sbjct: 123 QALEIAEALVRSGAVDIIVVDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLTGVIA 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ T IF+NQIR K+G YGNPE T GG ALKF+ASVRLE+R IK +G E +G R
Sbjct: 183 KSRTTAIFINQIREKVGA-YGNPETTPGGRALKFYASVRLEVRKVDDIK--RGTEKIGTR 239
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VR RV K+K++ P+KQAEF+I+FGEG+S+ G +LD A ++ + G+WYSYGD RLGQG
Sbjct: 240 VRARVVKNKLAPPFKQAEFDILFGEGISREGSLLDAALATKLITKTGSWYSYGDIRLGQG 299
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
R+ +YL+++P L +EIE +R ++ G
Sbjct: 300 RENVREYLKEHPELFQEIENKIRQLLQGG 328
>gi|142092|gb|AAA22031.1| DNA-repair protein (recA) [Anabaena variabilis]
Length = 358
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/328 (59%), Positives = 255/328 (77%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET +G LTLDLALGGGLP+GR++EI+G
Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPRGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAE A DP+Y+ ALGVD++NL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHAIAEVQKEGGIAAFVDAEQALDPTYASALGVDIQNLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ S A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVPSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE I++RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILLRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P E+I++ VR + G+V
Sbjct: 308 AIKYLEEKPEFAEQIKQQVREKLDKGAV 335
>gi|90818658|emb|CAJ32634.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDALVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|289578367|ref|YP_003476994.1| recA protein [Thermoanaerobacter italicus Ab9]
gi|297544644|ref|YP_003676946.1| recA protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|289528080|gb|ADD02432.1| recA protein [Thermoanaerobacter italicus Ab9]
gi|296842419|gb|ADH60935.1| recA protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 341
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/324 (56%), Positives = 251/324 (77%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+AL+ A++ I FGKGS+ RLG VE P+G L LD+ALG GG+P+GRI+
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH IAE QK+GG +DAEHA DP Y+K LGV++E+L+V QPD G
Sbjct: 61 EIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGA+D+I +DSV+AL P+AEI+GE+G +GLQARLMSQALRK++G
Sbjct: 121 EQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGVT 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ ++F+NQ+R K+G+ +GNPE T GG ALKF+A++RL++R IK +G+E VG
Sbjct: 181 SKSKTIVVFINQLREKVGIMFGNPETTPGGRALKFYATIRLDVRKVDPIK--QGNEIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P+KQAEF+I++GEG+S+ G +LD +DI+ + GAWYSYGD RLGQ
Sbjct: 239 RTRVKVVKNKVAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L++N + +EIE+ +R
Sbjct: 299 GRENAKQFLKENKEIADEIERKIR 322
>gi|283856414|ref|YP_162901.2| recombinase A [Zymomonas mobilis subsp. mobilis ZM4]
gi|384411101|ref|YP_005620466.1| recA protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|397676052|ref|YP_006517590.1| protein recA [Zymomonas mobilis subsp. mobilis ATCC 29191]
gi|292495071|sp|Q9X5D8.3|RECA_ZYMMO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|283775414|gb|AAV89790.2| recA protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|335931475|gb|AEH62015.1| recA protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|395396741|gb|AFN56068.1| Protein recA [Zymomonas mobilis subsp. mobilis ATCC 29191]
Length = 354
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 254/331 (76%), Gaps = 3/331 (0%)
Query: 81 SDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GG 139
+ SG +D+Q+AL+AA+ I+ +FGKGSV RLGS ++T SG L LD+ALG GG
Sbjct: 8 TTSGKDNNMDKQKALEAALAQIDRAFGKGSVMRLGSREKIEIDTISSGSLGLDIALGIGG 67
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
LP+GRIVEI+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGV+ ++LI
Sbjct: 68 LPRGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLI 127
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
V QPD GE ALEI D + RS A+D++ VDSV+ALTPRAEIEGE+G +GLQARLMSQAL
Sbjct: 128 VSQPDTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQAL 187
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK++G+ +++ +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR G+IK
Sbjct: 188 RKITGSINRSQTLVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRVGQIKDR- 246
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
DE VG RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD I+ + G+W+S+
Sbjct: 247 -DEIVGNATRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIIDKSGSWFSH 305
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A +LR++P + E+IEK++R
Sbjct: 306 DSVRIGQGRENAKTFLREHPEMTEKIEKMIR 336
>gi|326389417|ref|ZP_08210984.1| recA protein [Thermoanaerobacter ethanolicus JW 200]
gi|345017684|ref|YP_004820037.1| protein recA [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940973|ref|ZP_10306617.1| protein RecA [Thermoanaerobacter siderophilus SR4]
gi|325994422|gb|EGD52847.1| recA protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033027|gb|AEM78753.1| Protein recA [Thermoanaerobacter wiegelii Rt8.B1]
gi|392292723|gb|EIW01167.1| protein RecA [Thermoanaerobacter siderophilus SR4]
Length = 341
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 251/324 (77%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+AL+ A++ I FGKGS+ RLG VE P+G L LD+ALG GG+P+GRI+
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH IAE QK+GG +DAEHA DP Y+K LGV++E+L+V QPD G
Sbjct: 61 EIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGA+D+I +DSV+AL P+AEI+GE+G +GLQARLMSQALRK++G
Sbjct: 121 EQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGVT 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ ++F+NQ+R K+GV +GNPE T GG ALKF+A++RL++R IK +G+E +G
Sbjct: 181 SKSKTIVVFINQLREKVGVMFGNPETTPGGRALKFYATIRLDVRKVDAIK--QGNEIIGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+K++ P+KQAEF+I++GEG+S+ G +LD +DI+ + GAWYSYGD RLGQ
Sbjct: 239 RTRVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L++N + +EIE+ +R
Sbjct: 299 GRENAKQFLKENKEIADEIERKIR 322
>gi|283456289|ref|YP_003360853.1| RecA protein [Bifidobacterium dentium Bd1]
gi|306822508|ref|ZP_07455886.1| recombination protein A [Bifidobacterium dentium ATCC 27679]
gi|309801448|ref|ZP_07695575.1| RecA protein [Bifidobacterium dentium JCVIHMP022]
gi|283102923|gb|ADB10029.1| RecA protein [Bifidobacterium dentium Bd1]
gi|304554053|gb|EFM41962.1| recombination protein A [Bifidobacterium dentium ATCC 27679]
gi|308221963|gb|EFO78248.1| RecA protein [Bifidobacterium dentium JCVIHMP022]
Length = 386
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 247/322 (76%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
RQ AL+ A+ + +FGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 24 RQAALETALAQVEKNFGKGSAMRLGDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEIY 83
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++LIV QPDNGE A
Sbjct: 84 GPESSGKTTLALHVVANAQKKGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQA 143
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 144 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 203
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR++IR IK+ GDE VG R R
Sbjct: 204 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRMDIRRIQTIKN--GDEAVGNRTR 261
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+SK G +LD A +++V + G+W++Y +LGQGR+
Sbjct: 262 VKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMALQVNVVKKSGSWFTYDGDQLGQGRE 321
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
Q+L+DNP + EEIE V++
Sbjct: 322 NVRQFLKDNPGVTEEIENRVKA 343
>gi|312132580|ref|YP_003999919.1| reca [Bifidobacterium longum subsp. longum BBMN68]
gi|311773522|gb|ADQ03010.1| RecA [Bifidobacterium longum subsp. longum BBMN68]
Length = 418
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/330 (57%), Positives = 252/330 (76%), Gaps = 5/330 (1%)
Query: 85 DSRFLD--RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
D LD R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLP
Sbjct: 36 DKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLP 95
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGRIVEI+GPESSGKTTLALH +A QK GG + +DAEHA DP+Y++ LGVD ++LIV
Sbjct: 96 KGRIVEIYGPESSGKTTLALHVVANAQKKGGVSAYIDAEHALDPAYARKLGVDTDSLIVS 155
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK
Sbjct: 156 QPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 215
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
M+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GD
Sbjct: 216 MTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GD 273
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E VG R RV+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y
Sbjct: 274 EAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEG 333
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+LGQGR+K Q+L+DNP + EEIE V++
Sbjct: 334 DQLGQGREKVRQFLKDNPAITEEIENKVKA 363
>gi|167037603|ref|YP_001665181.1| recombinase A [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040264|ref|YP_001663249.1| recombinase A [Thermoanaerobacter sp. X514]
gi|256750811|ref|ZP_05491696.1| recA protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300914348|ref|ZP_07131664.1| recA protein [Thermoanaerobacter sp. X561]
gi|307724416|ref|YP_003904167.1| recA protein [Thermoanaerobacter sp. X513]
gi|320116018|ref|YP_004186177.1| recA protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166854504|gb|ABY92913.1| recA protein [Thermoanaerobacter sp. X514]
gi|166856437|gb|ABY94845.1| recA protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256750394|gb|EEU63413.1| recA protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889283|gb|EFK84429.1| recA protein [Thermoanaerobacter sp. X561]
gi|307581477|gb|ADN54876.1| recA protein [Thermoanaerobacter sp. X513]
gi|319929109|gb|ADV79794.1| recA protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 341
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 251/324 (77%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+AL+ A++ I FGKGS+ RLG VE P+G L LD+ALG GG+P+GRI+
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH IAE QK+GG +DAEHA DP Y+K LGV++E+L+V QPD G
Sbjct: 61 EIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGA+D+I +DSV+AL P+AEI+GE+G +GLQARLMSQALRK++G
Sbjct: 121 EQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGVT 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ ++F+NQ+R K+GV +GNPE T GG ALKF+A++RL++R IK +G+E +G
Sbjct: 181 SKSKTIVVFINQLREKVGVLFGNPETTPGGRALKFYATIRLDVRKVDAIK--QGNEIIGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+K++ P+KQAEF+I++GEG+S+ G +LD +DI+ + GAWYSYGD RLGQ
Sbjct: 239 RTRVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L++N + +EIE+ +R
Sbjct: 299 GRENAKQFLKENKEIADEIERKIR 322
>gi|399888392|ref|ZP_10774269.1| recombinase A [Clostridium arbusti SL206]
Length = 352
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/322 (58%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM I FGKGS+ +LG G A +++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 4 EKLKAIEAAMGQIEKQFGKGSIMKLGEHGIADIDSISTGCLALDIALGIGGVPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH IAE QK G A +DAEHA DPSY+K LGVD ENLIV QPD GE
Sbjct: 64 YGPESSGKTTVALHIIAEAQKTDGTAAFIDAEHALDPSYAKRLGVDTENLIVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGAID+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 124 GLEIAEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGAINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C ++F+NQ+R K+G+ +GNPE T GG ALKF+ASVR++IR IK +G+E +G R
Sbjct: 184 SNCVVVFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIK--QGEEMIGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++ EG+SK G ++D +IV + GAW+SYG+ RLGQGR
Sbjct: 242 RVKVIKNKIAPPFKQAEFDIMYNEGISKQGNIIDVGVKEEIVQKSGAWFSYGEIRLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL++NP ++ EIE +R
Sbjct: 302 ENAKQYLKENPDIEMEIETKIR 323
>gi|296132793|ref|YP_003640040.1| recA protein [Thermincola potens JR]
gi|296031371|gb|ADG82139.1| recA protein [Thermincola potens JR]
Length = 343
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 253/327 (77%), Gaps = 6/327 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALD A++ I FGKGS+ +LG A + +E P+G L LD+ALG GG+P+GR+VE
Sbjct: 3 DKLKALDMALSQIEKQFGKGSIMKLGEASAKMNIEVIPTGALALDVALGVGGVPRGRVVE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAE QKLGG A +DAEHA DP Y++ LGVD++NL+V QPD GE
Sbjct: 63 IYGPESSGKTTVALHIIAEAQKLGGTAAFIDAEHALDPYYARKLGVDIDNLLVSQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 123 QALEIAEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAIS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV-GV 326
K+ T IF+NQIR K+GV +GNPE T GG ALKF+ASVR+E+R KI+S+K DV G
Sbjct: 183 KSRTTAIFINQIREKVGVMFGNPETTPGGRALKFYASVRMEVR---KIESLKQGADVIGS 239
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P+KQA+F+I +GEG+S+ G ++D A ++I+ + GAWYSY D+RLGQ
Sbjct: 240 RTRVKVVKNKVAPPFKQADFDITYGEGISREGSIIDMATDLNILNKSGAWYSYKDERLGQ 299
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMM 413
GR+ +YL+++P + EIE+ +R +
Sbjct: 300 GRENVKEYLKEHPEIANEIEEKIRESL 326
>gi|404370959|ref|ZP_10976274.1| protein recA [Clostridium sp. 7_2_43FAA]
gi|226912919|gb|EEH98120.1| protein recA [Clostridium sp. 7_2_43FAA]
Length = 346
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/323 (58%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +A++ AM I FGKGS+ +LG +ET +GCL LD+ALG GGLPKGRI+E
Sbjct: 6 MDKLKAIENAMGQIEKQFGKGSIMKLGENSALNIETISTGCLDLDIALGVGGLPKGRIIE 65
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH AE QKLGG +DAEHA DPSY++ LGVD ENLIV QPD GE
Sbjct: 66 IYGPESSGKTTVALHVAAEAQKLGGAVAFIDAEHALDPSYARRLGVDTENLIVSQPDTGE 125
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
LEIA+ + RSGAID+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 126 QGLEIAEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTIQ 185
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K GC IF+NQ+R K+GV +GNPE T+GG ALKF++SVRL++R IK +G+ VG R
Sbjct: 186 KTGCIAIFINQLREKVGVMFGNPETTTGGRALKFYSSVRLDVRRIDSIK--QGESVVGNR 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++ EG+S+ G ++D +V + GAW+SYGD RLGQG
Sbjct: 244 TRVKVIKNKVAPPFKQAEFDIMYNEGISRTGNIVDVGVKEGMVQKSGAWFSYGDVRLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A QYL+DNP + EIE +R
Sbjct: 304 RENAKQYLKDNPEIALEIENKIR 326
>gi|442805655|ref|YP_007373804.1| protein RecA [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442741505|gb|AGC69194.1| protein RecA [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 345
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/323 (57%), Positives = 250/323 (77%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL+ + I FGKG++ +LG A ++ P+G L LD+ALG GGLP+GRIVEI
Sbjct: 5 EKKKALEMVFSQIEKQFGKGAIMKLGEAAHMNIDVIPTGALGLDIALGVGGLPRGRIVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+KALGV++ENLIV QPD GE
Sbjct: 65 FGPESSGKTTVALHVIAEAQKAGGEAAFIDAEHALDPVYAKALGVNIENLIVSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I +DSV+AL P+AEI+GE+G Q +GLQARLMSQALRK+SG SK
Sbjct: 125 ALEIAEALVRSGAIDVIVIDSVAALVPKAEIDGEMGEQYVGLQARLMSQALRKLSGVISK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPEVT GG ALKF+AS+R+++R +K +G E VG R
Sbjct: 185 SRTVAIFINQLREKVGVMFGNPEVTPGGRALKFYASIRMDVRKVETLK--EGGEPVGNRT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+K+AEF+II+GEG+SK G +LD A +DI+ + GAW+SY DQRLGQGR
Sbjct: 243 RVKIVKNKVAPPFKEAEFDIIYGEGISKEGNVLDIAVQLDIIKKSGAWFSYNDQRLGQGR 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ ++L++NP + EIE +R+
Sbjct: 303 ENVKKFLKENPEICREIEAKIRA 325
>gi|261325290|ref|ZP_05964487.1| recombinase A [Brucella neotomae 5K33]
gi|261301270|gb|EEY04767.1| recombinase A [Brucella neotomae 5K33]
Length = 348
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 181 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 299 GRENAKQYLKDNPEVAREIETTLR 322
>gi|417942042|ref|ZP_12585319.1| Protein RecA (Recombinase A) [Bifidobacterium breve CECT 7263]
gi|376167427|gb|EHS86263.1| Protein RecA (Recombinase A) [Bifidobacterium breve CECT 7263]
Length = 416
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/322 (58%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R+ ALD A+ + +FGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 45 RKAALDTALAQVEKNFGKGSAMRLGDQPVQNVEVIPTGSLALDMALGIGGLPKGRIVEIY 104
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV QPDNGE A
Sbjct: 105 GPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQA 164
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 165 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 224
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GDE VG R R
Sbjct: 225 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GDEAVGNRTR 282
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y +LGQGR+
Sbjct: 283 VKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGRE 342
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
K Q+L+DNP + EEIE V++
Sbjct: 343 KVRQFLKDNPAITEEIENKVKA 364
>gi|343522848|ref|ZP_08759814.1| RecA protein [Actinomyces sp. oral taxon 175 str. F0384]
gi|343402257|gb|EGV14763.1| RecA protein [Actinomyces sp. oral taxon 175 str. F0384]
Length = 413
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 250/332 (75%), Gaps = 3/332 (0%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGR 144
S+ DR +AL A+ I+ SFGKGSV RLG V P+G + LD+ALG GGLP+GR
Sbjct: 5 SQTQDRSKALATALAQIDKSFGKGSVMRLGDESRPPVSVIPTGSVALDVALGVGGLPRGR 64
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
IVE++GPESSGKTT+ALHA+A Q+ GGNA +DAEHA DP Y+KALGVD++NL+V QPD
Sbjct: 65 IVEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPD 124
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GE ALEI D + RSG +D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 125 TGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITG 184
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
S G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL++R G +K GD+ V
Sbjct: 185 ALSSTGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDVRRIGGLKD--GDQPV 242
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G R RV+V K+K++ P+KQAEF+I++G+G+S+ G +LD +V + GAW++YG+ +L
Sbjct: 243 GNRTRVKVVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQL 302
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
GQG++ A +L+DNP L EIE+ + + + G
Sbjct: 303 GQGKENARNFLKDNPQLAAEIEEKILAALGIG 334
>gi|354952162|emb|CCE46008.1| RecA protein, partial [Brucella sp. 152]
Length = 329
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 7 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 66
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 67 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 126
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 127 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 186
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 187 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 244
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 245 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 304
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 305 GRENAKQYLKDNPEVAREIETTLR 328
>gi|148559731|ref|YP_001259122.1| recombinase A [Brucella ovis ATCC 25840]
gi|148370988|gb|ABQ60967.1| protein RecA [Brucella ovis ATCC 25840]
Length = 424
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 77 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 136
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 137 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 196
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 197 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 256
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 257 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 314
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 315 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 374
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 375 GRENAKQYLKDNPEVAREIETTLR 398
>gi|188586099|ref|YP_001917644.1| recombinase A [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350786|gb|ACB85056.1| RecA protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 364
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/320 (57%), Positives = 250/320 (78%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+ALD A++ I FGKGS+ +LG + + VE P+G L+LD+ALG GGLP+GR+V
Sbjct: 1 MEKQKALDMALSQIEKQFGKGSIMKLGESNAKMNVEVIPTGALSLDIALGIGGLPRGRVV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
E++GPESSGKTT+ALHA+AE QK GGNA +DAEHA DP+Y++ LGV+++ L+V QPD G
Sbjct: 61 EVYGPESSGKTTVALHAVAEAQKNGGNAAFIDAEHALDPAYARNLGVNIDELLVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGAID+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG+
Sbjct: 121 EQALEIAESLVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGSI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
K+ T +F+NQIR K+GV +GNPE T GG ALKF++SVR+E+R +K KG++ +G
Sbjct: 181 RKSRTTAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRIEVRRIESLK--KGNDIIGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R R +V K+KV+ P+K+AEF+I++GEG+SK +LD A ++IV + G WYSYG+ RLGQ
Sbjct: 239 RTRGKVVKNKVAPPFKKAEFDIMYGEGISKESNILDLASELNIVTKSGPWYSYGEDRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIE 406
G++ A YLRDNP + E IE
Sbjct: 299 GKENARNYLRDNPDIAEAIE 318
>gi|89473563|emb|CAJ34594.1| recombinase A [Brucella abortus]
gi|89473565|emb|CAJ34595.1| recombinase A [Brucella canis]
gi|89473567|emb|CAJ34596.1| recombinase A [Brucella neotomae]
gi|89473569|emb|CAJ34597.1| recombinase A [Brucella ovis]
gi|89473571|emb|CAJ34598.1| recombinase A [Brucella suis 1330]
gi|89473573|emb|CAJ34599.1| recombinase A [Brucella pinnipedialis]
gi|89473575|emb|CAJ34600.1| recombinase A [Brucella ceti]
gi|90818664|emb|CAJ32637.1| recombinase A [Brucella melitensis]
Length = 355
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|256369626|ref|YP_003107136.1| recombinase A [Brucella microti CCM 4915]
gi|255999788|gb|ACU48187.1| recombinase A [Brucella microti CCM 4915]
Length = 361
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 251/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE ++R
Sbjct: 312 GRENAKQYLKDNPEVAREIETMLR 335
>gi|4768851|gb|AAD29645.1|AF124757_5 RecA protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 339
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/323 (59%), Positives = 251/323 (77%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+Q+AL+AA+ I+ +FGKGSV RLGS ++T SG L LD+ALG GGLP+GRIVE
Sbjct: 1 MDKQKALEAALAQIDRAFGKGSVMRLGSREKIEIDTISSGSLGLDIALGIGGLPRGRIVE 60
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGV+ ++LIV QPD GE
Sbjct: 61 IYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIVSQPDTGE 120
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS A+D++ VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++G+ +
Sbjct: 121 QALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKITGSIN 180
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR G+IK DE VG
Sbjct: 181 RSQTLVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRVGQIKD--RDEIVGNA 238
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K+ RP+KQ EF+I++GEGVSK+G +LD I+ + G+W+S+ R+GQG
Sbjct: 239 TRVKVVKNKLLRPFKQVEFDIMYGEGVSKMGEILDLGVKAGIIDKSGSWFSHDSVRIGQG 298
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +LR++P + E+IEK++R
Sbjct: 299 RENAKTFLREHPEMTEKIEKMIR 321
>gi|325068442|ref|ZP_08127115.1| recA protein [Actinomyces oris K20]
Length = 413
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 250/332 (75%), Gaps = 3/332 (0%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGR 144
S+ DR +AL A+ I+ SFGKGSV RLG V P+G + LD+ALG GGLP+GR
Sbjct: 5 SQTQDRSKALATALAQIDKSFGKGSVMRLGDESRPPVSVIPTGSVALDVALGVGGLPRGR 64
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
IVE++GPESSGKTT+ALHA+A Q+ GGNA +DAEHA DP Y+KALGVD++NL+V QPD
Sbjct: 65 IVEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPD 124
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GE ALEI D + RSG +D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 125 TGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITG 184
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
S G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL++R G +K GD+ V
Sbjct: 185 ALSSTGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDVRRIGGLKD--GDQPV 242
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G R RV+V K+K++ P+KQAEF+I++G+G+S+ G +LD +V + GAW++YG+ +L
Sbjct: 243 GNRTRVKVVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQL 302
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
GQG++ A +L+DNP L EIE+ + + + G
Sbjct: 303 GQGKENARNFLKDNPQLAAEIEEKILAALGIG 334
>gi|260883955|ref|ZP_05895569.1| recombinase A [Brucella abortus bv. 9 str. C68]
gi|261222365|ref|ZP_05936646.1| recombinase A [Brucella ceti B1/94]
gi|265988866|ref|ZP_06101423.1| recombinase A [Brucella pinnipedialis M292/94/1]
gi|265991280|ref|ZP_06103837.1| recombinase A [Brucella melitensis bv. 1 str. Rev.1]
gi|265995117|ref|ZP_06107674.1| recombinase A [Brucella melitensis bv. 3 str. Ether]
gi|265998330|ref|ZP_06110887.1| recombinase A [Brucella ceti M490/95/1]
gi|294852537|ref|ZP_06793210.1| RecA protein [Brucella sp. NVSL 07-0026]
gi|376273069|ref|YP_005151647.1| recA protein [Brucella abortus A13334]
gi|376276188|ref|YP_005116627.1| recA protein [Brucella canis HSK A52141]
gi|384211568|ref|YP_005600650.1| recA protein [Brucella melitensis M5-90]
gi|384408675|ref|YP_005597296.1| RecA bacterial DNA recombination protein [Brucella melitensis M28]
gi|384445257|ref|YP_005603976.1| recA protein [Brucella melitensis NI]
gi|260873483|gb|EEX80552.1| recombinase A [Brucella abortus bv. 9 str. C68]
gi|260920949|gb|EEX87602.1| recombinase A [Brucella ceti B1/94]
gi|262552798|gb|EEZ08788.1| recombinase A [Brucella ceti M490/95/1]
gi|262766230|gb|EEZ12019.1| recombinase A [Brucella melitensis bv. 3 str. Ether]
gi|263002064|gb|EEZ14639.1| recombinase A [Brucella melitensis bv. 1 str. Rev.1]
gi|264661063|gb|EEZ31324.1| recombinase A [Brucella pinnipedialis M292/94/1]
gi|294821126|gb|EFG38125.1| RecA protein [Brucella sp. NVSL 07-0026]
gi|326409222|gb|ADZ66287.1| RecA bacterial DNA recombination protein [Brucella melitensis M28]
gi|326538931|gb|ADZ87146.1| recA protein [Brucella melitensis M5-90]
gi|349743248|gb|AEQ08791.1| recA protein [Brucella melitensis NI]
gi|363400675|gb|AEW17645.1| recA protein [Brucella abortus A13334]
gi|363404755|gb|AEW15050.1| recA protein [Brucella canis HSK A52141]
Length = 348
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 181 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 299 GRENAKQYLKDNPEVAREIETTLR 322
>gi|260758162|ref|ZP_05870510.1| recombinase A [Brucella abortus bv. 4 str. 292]
gi|260761988|ref|ZP_05874331.1| recombinase A [Brucella abortus bv. 2 str. 86/8/59]
gi|260668480|gb|EEX55420.1| recombinase A [Brucella abortus bv. 4 str. 292]
gi|260672420|gb|EEX59241.1| recombinase A [Brucella abortus bv. 2 str. 86/8/59]
Length = 420
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 73 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 132
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 133 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 192
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 193 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 252
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 253 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 310
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 311 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 370
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 371 GRENAKQYLKDNPEVAREIETTLR 394
>gi|365855071|ref|ZP_09395128.1| RecA protein [Acetobacteraceae bacterium AT-5844]
gi|363719510|gb|EHM02817.1| RecA protein [Acetobacteraceae bacterium AT-5844]
Length = 353
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/325 (59%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGA-LVETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ R+G+ + VE P+G L LDLALG GGLPKGRI+
Sbjct: 8 MDKNKALDAALSQIERAFGKGSIMRMGAKQQSDEVEVIPTGSLGLDLALGIGGLPKGRII 67
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVDV+NL++ QPD G
Sbjct: 68 EIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 127
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK++G
Sbjct: 128 EQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGTV 187
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C LIFLNQIR KIGV +GNPE T+GG ALKF+ASVRLEIR G+IK D VG
Sbjct: 188 SRSNCLLIFLNQIRLKIGVMFGNPETTTGGNALKFYASVRLEIRRIGQIKDR--DNVVGN 245
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P++Q EF+I++GEGVSK+G ++D +V + GAW+S +QR+GQ
Sbjct: 246 QTRVKVVKNKMAPPFRQVEFDIMYGEGVSKVGELIDLGVKASVVEKSGAWFSCDNQRIGQ 305
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A Q+LRDNP + E IE +R+
Sbjct: 306 GRENAKQFLRDNPAMAESIENRIRA 330
>gi|23502079|ref|NP_698206.1| recombinase A [Brucella suis 1330]
gi|62290113|ref|YP_221906.1| recombinase A [Brucella abortus bv. 1 str. 9-941]
gi|82700036|ref|YP_414610.1| recombinase A [Brucella melitensis biovar Abortus 2308]
gi|161619157|ref|YP_001593044.1| recombinase A [Brucella canis ATCC 23365]
gi|189024351|ref|YP_001935119.1| recombinase A [Brucella abortus S19]
gi|225852698|ref|YP_002732931.1| recombinase A [Brucella melitensis ATCC 23457]
gi|229220681|ref|NP_539704.2| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260546662|ref|ZP_05822401.1| recombinase A [Brucella abortus NCTC 8038]
gi|260565545|ref|ZP_05836029.1| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260566268|ref|ZP_05836738.1| recombinase A [Brucella suis bv. 4 str. 40]
gi|260754946|ref|ZP_05867294.1| recombinase A [Brucella abortus bv. 6 str. 870]
gi|261214198|ref|ZP_05928479.1| recombinase A [Brucella abortus bv. 3 str. Tulya]
gi|261219550|ref|ZP_05933831.1| recombinase A [Brucella ceti M13/05/1]
gi|261314076|ref|ZP_05953273.1| recombinase [Brucella pinnipedialis M163/99/10]
gi|261317836|ref|ZP_05957033.1| recombinase A [Brucella pinnipedialis B2/94]
gi|261322045|ref|ZP_05961242.1| recombinase A [Brucella ceti M644/93/1]
gi|261752510|ref|ZP_05996219.1| recombinase A [Brucella suis bv. 5 str. 513]
gi|261755169|ref|ZP_05998878.1| recombinase A [Brucella suis bv. 3 str. 686]
gi|261758393|ref|ZP_06002102.1| recombinase A [Brucella sp. F5/99]
gi|265984260|ref|ZP_06096995.1| recombinase A [Brucella sp. 83/13]
gi|265999433|ref|ZP_05466343.2| recombinase A [Brucella melitensis bv. 2 str. 63/9]
gi|306838011|ref|ZP_07470869.1| recA protein [Brucella sp. NF 2653]
gi|306844103|ref|ZP_07476697.1| recA protein [Brucella inopinata BO1]
gi|340790820|ref|YP_004756285.1| recombinase A [Brucella pinnipedialis B2/94]
gi|376280873|ref|YP_005154879.1| recombinase A [Brucella suis VBI22]
gi|384224867|ref|YP_005616031.1| recombinase A [Brucella suis 1330]
gi|423166703|ref|ZP_17153406.1| protein recA [Brucella abortus bv. 1 str. NI435a]
gi|423170923|ref|ZP_17157598.1| protein recA [Brucella abortus bv. 1 str. NI474]
gi|423172995|ref|ZP_17159666.1| protein recA [Brucella abortus bv. 1 str. NI486]
gi|423178312|ref|ZP_17164956.1| protein recA [Brucella abortus bv. 1 str. NI488]
gi|423180353|ref|ZP_17166994.1| protein recA [Brucella abortus bv. 1 str. NI010]
gi|423183485|ref|ZP_17170122.1| protein recA [Brucella abortus bv. 1 str. NI016]
gi|423185575|ref|ZP_17172189.1| protein recA [Brucella abortus bv. 1 str. NI021]
gi|423188710|ref|ZP_17175320.1| protein recA [Brucella abortus bv. 1 str. NI259]
gi|54039031|sp|P65976.1|RECA_BRUSU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|54041791|sp|P65975.1|RECA_BRUME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|68067733|sp|Q04761.2|RECA_BRUAB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123768490|sp|Q2YRU7.1|RECA_BRUA2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039591|sp|A9M5L8.1|RECA_BRUC2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238689380|sp|B2S648.1|RECA_BRUA1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790424|sp|C0RJG9.1|RECA_BRUMB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|23348037|gb|AAN30121.1| recA protein [Brucella suis 1330]
gi|62196245|gb|AAX74545.1| RecA, recA protein [Brucella abortus bv. 1 str. 9-941]
gi|82616137|emb|CAJ11180.1| RecA bacterial DNA recombination protein:ATP/GTP-binding site motif
A (P-loop):AAA ATPase [Brucella melitensis biovar
Abortus 2308]
gi|161335968|gb|ABX62273.1| recA protein [Brucella canis ATCC 23365]
gi|189019923|gb|ACD72645.1| RecA bacterial DNA recombination protein [Brucella abortus S19]
gi|225641063|gb|ACO00977.1| recA protein [Brucella melitensis ATCC 23457]
gi|260095712|gb|EEW79589.1| recombinase A [Brucella abortus NCTC 8038]
gi|260151613|gb|EEW86707.1| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260155786|gb|EEW90866.1| recombinase A [Brucella suis bv. 4 str. 40]
gi|260675054|gb|EEX61875.1| recombinase A [Brucella abortus bv. 6 str. 870]
gi|260915805|gb|EEX82666.1| recombinase A [Brucella abortus bv. 3 str. Tulya]
gi|260924639|gb|EEX91207.1| recombinase A [Brucella ceti M13/05/1]
gi|261294735|gb|EEX98231.1| recombinase A [Brucella ceti M644/93/1]
gi|261297059|gb|EEY00556.1| recombinase A [Brucella pinnipedialis B2/94]
gi|261303102|gb|EEY06599.1| recombinase [Brucella pinnipedialis M163/99/10]
gi|261738377|gb|EEY26373.1| recombinase A [Brucella sp. F5/99]
gi|261742263|gb|EEY30189.1| recombinase A [Brucella suis bv. 5 str. 513]
gi|261744922|gb|EEY32848.1| recombinase A [Brucella suis bv. 3 str. 686]
gi|263093939|gb|EEZ17873.1| recombinase A [Brucella melitensis bv. 2 str. 63/9]
gi|264662852|gb|EEZ33113.1| recombinase A [Brucella sp. 83/13]
gi|306275546|gb|EFM57278.1| recA protein [Brucella inopinata BO1]
gi|306406935|gb|EFM63156.1| recA protein [Brucella sp. NF 2653]
gi|340559279|gb|AEK54517.1| recombinase A [Brucella pinnipedialis B2/94]
gi|343383047|gb|AEM18539.1| recombinase A [Brucella suis 1330]
gi|358258472|gb|AEU06207.1| recombinase A [Brucella suis VBI22]
gi|374539501|gb|EHR11005.1| protein recA [Brucella abortus bv. 1 str. NI474]
gi|374542934|gb|EHR14418.1| protein recA [Brucella abortus bv. 1 str. NI435a]
gi|374543550|gb|EHR15032.1| protein recA [Brucella abortus bv. 1 str. NI486]
gi|374545551|gb|EHR17012.1| protein recA [Brucella abortus bv. 1 str. NI488]
gi|374548917|gb|EHR20364.1| protein recA [Brucella abortus bv. 1 str. NI010]
gi|374549548|gb|EHR20991.1| protein recA [Brucella abortus bv. 1 str. NI016]
gi|374558368|gb|EHR29761.1| protein recA [Brucella abortus bv. 1 str. NI259]
gi|374559666|gb|EHR31051.1| protein recA [Brucella abortus bv. 1 str. NI021]
Length = 361
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|381201040|ref|ZP_09908171.1| recombinase A [Sphingobium yanoikuyae XLDN2-5]
Length = 341
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/323 (58%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+AL+AA+ I+ +FGKGS +LGS +E+ +G L LD+ALG GGLPKGRI+E
Sbjct: 1 MDRQKALEAALAQIDRAFGKGSAMKLGSREKIEIESISTGSLGLDIALGIGGLPKGRIIE 60
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LHAIAE QK GG A VDAEHA DP Y+K LGVD++ LIV QPD GE
Sbjct: 61 IYGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVDIDELIVSQPDTGE 120
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +
Sbjct: 121 QALEIVDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSIA 180
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK D+ VG
Sbjct: 181 RSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR--DDIVGNA 238
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+SK+G MLD +V + G+W+SY R+GQG
Sbjct: 239 TRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEMLDIGVKAGLVEKSGSWFSYDSVRIGQG 298
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +L++NP + + +EK +R
Sbjct: 299 RENAKTFLKENPEMADRLEKAIR 321
>gi|260588139|ref|ZP_05854052.1| protein RecA [Blautia hansenii DSM 20583]
gi|331082295|ref|ZP_08331421.1| recA [Lachnospiraceae bacterium 6_1_63FAA]
gi|260541666|gb|EEX22235.1| protein RecA [Blautia hansenii DSM 20583]
gi|330400781|gb|EGG80382.1| recA [Lachnospiraceae bacterium 6_1_63FAA]
Length = 358
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 255/323 (78%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALD A+ I FGKGS+ +LG + + VET P+G L+LD+ALG GG+PKGRI+E
Sbjct: 8 DKLKALDGALAQIEKQFGKGSIMKLGDSTANMNVETVPTGALSLDIALGLGGVPKGRIIE 67
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP+Y+K +GVD++NL + QPDNGE
Sbjct: 68 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPAYAKNIGVDIDNLYISQPDNGE 127
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D+I VDSV+AL P+AEIEG++G +GLQARLMSQALRK++ + S
Sbjct: 128 QALEITETMVRSGAVDIIIVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTAHIS 187
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPEVT+GG ALKF++S+R+++R +K +G E VG R
Sbjct: 188 KSNCIVIFINQLREKVGVMFGNPEVTTGGRALKFYSSIRMDVRRIETLK--QGGEMVGNR 245
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+K++ P+K+AEF+I+FGEG+SK G +LD A + IV + GAWY+Y D ++GQG
Sbjct: 246 TRIKVVKNKIAPPFKEAEFDIMFGEGISKEGDILDLAANIGIVNKSGAWYAYNDGKIGQG 305
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +YL++NP + EEIE+ VR
Sbjct: 306 RENAKKYLKENPEIAEEIEQKVR 328
>gi|266619254|ref|ZP_06112189.1| protein RecA, partial [Clostridium hathewayi DSM 13479]
gi|288869251|gb|EFD01550.1| protein RecA [Clostridium hathewayi DSM 13479]
Length = 325
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 256/324 (79%), Gaps = 6/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ I ++GKGSV +LG + VET P+G L+LD+ALG GG+PKGR+VE
Sbjct: 5 DKLKALDAAITQIEKAYGKGSVMKLGDGSVNMNVETIPTGSLSLDIALGLGGIPKGRVVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAEVQK GG A +DAEHA DP Y+K +GVD++NL + QPDNGE
Sbjct: 65 IYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPVYAKKIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D+I VDSV+AL P+AEIEG++G +GLQARLMSQALRK++G S
Sbjct: 125 QALEITETMVRSGAVDIIIVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
K+ CT++F+NQ+R K+GV +GNPE T+GG ALKF+ASVR++IR +I+S+K G E VG
Sbjct: 185 KSNCTVLFINQLREKVGVMFGNPETTTGGRALKFYASVRMDIR---RIESLKQGGEVVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
RVRV+V K+K++ P+K+AEF+I+FG G+SK G +LD A DIV + GAW++YG ++GQ
Sbjct: 242 RVRVKVVKNKIAPPFKEAEFDIMFGRGISKEGDVLDLAVKEDIVEKSGAWFAYGGAKIGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A YL+DNP + EEIE VR
Sbjct: 302 GRENAKIYLQDNPAVCEEIENKVR 325
>gi|237815621|ref|ZP_04594618.1| recA protein [Brucella abortus str. 2308 A]
gi|237788919|gb|EEP63130.1| recA protein [Brucella abortus str. 2308 A]
Length = 424
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 77 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 136
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 137 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 196
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 197 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 256
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 257 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 314
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 315 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 374
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 375 GRENAKQYLKDNPEVAREIETTLR 398
>gi|225627673|ref|ZP_03785710.1| recA protein [Brucella ceti str. Cudo]
gi|225617678|gb|EEH14723.1| recA protein [Brucella ceti str. Cudo]
Length = 424
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 77 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 136
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 137 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 196
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 197 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 256
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 257 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 314
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 315 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 374
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 375 GRENAKQYLKDNPEVAREIETTLR 398
>gi|171742631|ref|ZP_02918438.1| hypothetical protein BIFDEN_01744 [Bifidobacterium dentium ATCC
27678]
gi|171278245|gb|EDT45906.1| RecA protein [Bifidobacterium dentium ATCC 27678]
Length = 451
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/406 (50%), Positives = 274/406 (67%), Gaps = 27/406 (6%)
Query: 18 CHQLCFSPFNMKTHSCLLSISSSPLHCQS-------SRSRFF----TASSKLSAARKRDK 66
CH P + ++ S LH ++ S F A ++ +AA K
Sbjct: 18 CHANALRPTGVSEYASFDHHGRSGLHERTVGLYGEWKDSPLFLEEGVAMAQTNAAAK--- 74
Query: 67 KISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFP 126
G V +++ D R RQ AL+ A+ + +FGKGS RLG VE P
Sbjct: 75 -------GAVQNQAANGIDPR---RQAALETALAQVEKNFGKGSAMRLGDRPEQDVEVIP 124
Query: 127 SGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 185
+G L LD+ALG GGLPKGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP
Sbjct: 125 TGSLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAFIDAEHALDP 184
Query: 186 SYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGM 245
Y++ LGVD ++LIV QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G
Sbjct: 185 VYARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGD 244
Query: 246 QQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASV 305
+GLQARLMSQALRKM+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASV
Sbjct: 245 SHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASV 304
Query: 306 RLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAE 365
R++IR IK+ GDE VG R RV+V K+K++ P+K AEF++++GEG+SK G +LD A
Sbjct: 305 RMDIRRIQTIKN--GDEAVGNRTRVKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMAL 362
Query: 366 MMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+++V + G+W++Y +LGQGR+ Q+L+DNP + EEIE V++
Sbjct: 363 QVNVVKKSGSWFTYDGDQLGQGRENVRQFLKDNPGVTEEIENRVKA 408
>gi|148553436|ref|YP_001261018.1| recombinase A [Sphingomonas wittichii RW1]
gi|148498626|gb|ABQ66880.1| recA protein [Sphingomonas wittichii RW1]
Length = 357
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/323 (59%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+AL+AA+ I+ +FGKGS +LGS VE +G L LD+ALG GGLPKGR+VE
Sbjct: 17 MDRQKALEAALAQIDRAFGKGSAMKLGSRETMQVEAISTGSLGLDIALGIGGLPKGRVVE 76
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
+FGPESSGKTTLALHAIAE QK+GG A +DAEHA DP Y+K LGV+++ LIV QPD GE
Sbjct: 77 VFGPESSGKTTLALHAIAEAQKVGGTAAFIDAEHALDPVYAKKLGVNIDELIVSQPDTGE 136
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RS AID++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ S
Sbjct: 137 QALEIADTLVRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGSIS 196
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR TG IK DE VG
Sbjct: 197 RSKCLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRTGAIKDR--DEVVGNA 254
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEGVSK+G +LD +V + GAW+SY R+GQG
Sbjct: 255 TRVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELLDLGVKAGLVEKSGAWFSYDSIRIGQG 314
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + YLR+NP + ++E +R
Sbjct: 315 RENSKVYLRENPEVAAKLEAAIR 337
>gi|103487210|ref|YP_616771.1| recombinase A [Sphingopyxis alaskensis RB2256]
gi|98977287|gb|ABF53438.1| recA protein [Sphingopyxis alaskensis RB2256]
Length = 360
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/322 (59%), Positives = 248/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALDAA+ I+ +FGKGSV +LGS VE +G L LD+ALG GGLP+GR++EI
Sbjct: 18 DRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAVSTGSLGLDIALGVGGLPRGRVIEI 77
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH IAE QK+GG A VDAEHA DP Y++ LGVD++ LIV QPD GE
Sbjct: 78 YGPESSGKTTLALHCIAEAQKIGGTAAFVDAEHALDPVYARKLGVDIDELIVSQPDTGEQ 137
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ S+
Sbjct: 138 ALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISR 197
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK+ GDE VG
Sbjct: 198 SRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKN--GDEIVGNTT 255
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQ EF+I++G+G+SK+G +LD +V + GAW+SY R+GQGR
Sbjct: 256 RVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDIGVKAGLVEKSGAWFSYDSIRIGQGR 315
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A +L++NP L +E +R
Sbjct: 316 ENAKTFLKENPELMGRLEAAIR 337
>gi|326203615|ref|ZP_08193479.1| recA protein [Clostridium papyrosolvens DSM 2782]
gi|325986435|gb|EGD47267.1| recA protein [Clostridium papyrosolvens DSM 2782]
Length = 348
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/354 (54%), Positives = 262/354 (74%), Gaps = 8/354 (2%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
L++++AL+ A+ I FGKG+V +LG +E+ P+G ++LDLALG GG+P+GRIV
Sbjct: 1 MLEKKKALEMALGQIEKQFGKGAVMKLGENSHMNIESIPTGSMSLDLALGVGGVPRGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
E+FGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+K LGVD+ENLIV QPD G
Sbjct: 61 EVFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGAID+I +DSV+AL P+AEI+GE+G IGLQARLMSQALRK++G
Sbjct: 121 EQALEITEALVRSGAIDIIVIDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGVI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ T IF+NQ+R K+GV +GNPE T GG ALKF++SVRL++R IK + +E VG
Sbjct: 181 SKSRTTAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRRIEAIK--QANEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P+K+AEF+I++G+G+S+ G +LD A M+IV + GAW+SY QR+GQ
Sbjct: 239 RTRVKVVKNKVAPPFKEAEFDIVYGQGISREGSILDIAVSMEIVNKSGAWFSYNGQRIGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEEF 440
GR+ A QYL++N + EIEK++R+ +V + N +E+N L+E
Sbjct: 299 GRENAKQYLKENSAMCSEIEKLIRNNFVVTAVPE-----NEGASEEEDNSLDEI 347
>gi|304391434|ref|ZP_07373376.1| protein RecA [Ahrensia sp. R2A130]
gi|303295663|gb|EFL90021.1| protein RecA [Ahrensia sp. R2A130]
Length = 368
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/329 (58%), Positives = 253/329 (76%), Gaps = 4/329 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + LD+ +AL+AA+ I +FGKGS+ RLG+ A+ +ET +GC+ LD+ALG GGLPK
Sbjct: 10 EDKKLDKSKALEAALGQIERAFGKGSIMRLGANEQAVEIETISTGCIGLDIALGVGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTT+ALH +AE QK GG VDAEHA DP Y+K LGV++ENL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTMALHTVAEAQKEGGICAFVDAEHALDPVYAKKLGVNLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEIAD + RSGA D++ +DSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEIADTLVRSGACDILVIDSVAALTPRAEIEGEMGASLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKDR--DE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + R++V K+K++ P+KQ EF+I++GEGVSK+G ++D IV + G+W+SY Q
Sbjct: 248 IVGNQTRIKVVKNKLAPPFKQVEFDIMYGEGVSKMGELIDLGVTAGIVEKSGSWFSYDSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
RLGQGR+ A Q+LRDNP + E IEK +R+
Sbjct: 308 RLGQGRENAKQFLRDNPEVAETIEKAIRT 336
>gi|306840332|ref|ZP_07473104.1| recA protein [Brucella sp. BO2]
gi|306289731|gb|EFM60920.1| recA protein [Brucella sp. BO2]
Length = 389
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 42 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 101
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 102 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 161
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 162 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 221
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 222 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 279
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 280 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 339
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 340 GRENAKQYLKDNPEVAREIETTLR 363
>gi|297248509|ref|ZP_06932227.1| recombinase A [Brucella abortus bv. 5 str. B3196]
gi|17982728|gb|AAL51968.1| reca protein [Brucella melitensis bv. 1 str. 16M]
gi|297175678|gb|EFH35025.1| recombinase A [Brucella abortus bv. 5 str. B3196]
Length = 378
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 31 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 90
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 91 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 150
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 151 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 210
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 211 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 268
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 269 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 328
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 329 GRENAKQYLKDNPEVAREIETTLR 352
>gi|294787000|ref|ZP_06752254.1| protein RecA [Parascardovia denticolens F0305]
gi|315226642|ref|ZP_07868430.1| recombination protein A [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|294485833|gb|EFG33467.1| protein RecA [Parascardovia denticolens F0305]
gi|315120774|gb|EFT83906.1| recombination protein A [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 373
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 253/333 (75%), Gaps = 5/333 (1%)
Query: 80 SSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-G 138
+ D+ ++ RQ ALD A+ + +FGKGS RLG VE P+G L LDLALG G
Sbjct: 4 TKDTASAQDARRQAALDTALAQVEKTFGKGSAMRLGDKPVQHVEVIPTGSLALDLALGIG 63
Query: 139 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENL 198
GLP+GRIVEI+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y++ LGVD ++L
Sbjct: 64 GLPRGRIVEIYGPESSGKTTIALHAVANAQKAGGVAAFIDAEHALDPEYARKLGVDTDSL 123
Query: 199 IVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 258
I+ QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEI+GE+G +GLQARLMSQA
Sbjct: 124 IISQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQA 183
Query: 259 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318
LRKM+G S++ T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR +I+++
Sbjct: 184 LRKMTGALSQSNTTAIFINQLREKIGVMFGNPETTTGGKALKFYASVRLDIR---RIQTL 240
Query: 319 K-GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
K GDE VG R RV+V K+K++ P+K AEF+I++GEGVS+ G +LD + +V + G+W+
Sbjct: 241 KNGDEAVGNRTRVKVVKNKMAPPFKSAEFDILYGEGVSREGSILDMGLALGLVKKSGSWF 300
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
+Y +LGQGR+KA Q+L+DNP L +EIE V+
Sbjct: 301 TYDGDQLGQGREKARQFLKDNPQLADEIETKVK 333
>gi|399058151|ref|ZP_10744422.1| protein RecA [Novosphingobium sp. AP12]
gi|398041199|gb|EJL34273.1| protein RecA [Novosphingobium sp. AP12]
Length = 357
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 246/324 (75%), Gaps = 3/324 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+AL+AA+ I+ +FGKGS +LGS VE +G L LD+ALG GGLP+GR++E
Sbjct: 17 MDRQKALEAALAQIDKAFGKGSAMKLGSKETMQVEAISTGSLGLDIALGVGGLPRGRVIE 76
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH IAE QK GG A +DAEHA DP Y+K LGV+++ LIV QPD GE
Sbjct: 77 IYGPESSGKTTLALHVIAEAQKTGGTAAFIDAEHALDPVYAKKLGVNIDELIVSQPDTGE 136
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ S
Sbjct: 137 QALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSIS 196
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG IK DE VG
Sbjct: 197 RSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGAIKD--KDEVVGNA 254
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEGVSK+G +LD IV + GAW+SY R+GQG
Sbjct: 255 TRVKVVKNKVAPPFKQVEFDIMYGEGVSKIGEILDLGVKAGIVEKSGAWFSYDSVRIGQG 314
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ + YL+ NP + + +EK +R+
Sbjct: 315 RENSKTYLKQNPEVADRLEKAIRT 338
>gi|78044103|ref|YP_360011.1| recA protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77996218|gb|ABB15117.1| recA protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 343
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/326 (57%), Positives = 249/326 (76%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +AL+ ++ I FGKGS+ RLG G VE P+G L LDLALG GG+P+GR+VE
Sbjct: 3 DKLKALELTISQIEKQFGKGSIMRLGENTGKFQVEVIPTGSLALDLALGVGGVPRGRVVE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTT+ALH IAE QK+GG A +DAEHA DP Y++ LGVD+ENL+V QPD GE
Sbjct: 63 IFGPESSGKTTVALHIIAEAQKMGGIAAFIDAEHALDPVYAQKLGVDIENLLVSQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 123 QALEIAESLVRSGAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAIS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ IF+NQ+R K+GV +GNPE T GG ALKF+AS+R+++R IK +G++ +G R
Sbjct: 183 KSKTVAIFINQMREKVGVMFGNPETTPGGRALKFYASIRMDVRKIDVIK--QGNDIIGSR 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P+KQA+F+I++GEG+SK G +LD A + IV + G+WYSY D+RLGQG
Sbjct: 241 TRVKIVKNKVAPPFKQADFDIMYGEGISKEGSLLDVAVELKIVQKVGSWYSYNDERLGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
R+ A ++LR NP + EIE+ +R +
Sbjct: 301 RENAKEFLRQNPEIYREIEQKIREQV 326
>gi|218290126|ref|ZP_03494288.1| recA protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239835|gb|EED07024.1| recA protein [Alicyclobacillus acidocaldarius LAA1]
Length = 352
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 250/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D++ AL+ A+ I FGKGS+ RLG A VET P+G + LD+ALG GGLP+GRIVEI
Sbjct: 3 DKKAALEQALKHIEKQFGKGSIMRLGEAAAMTVETVPTGSIALDIALGVGGLPRGRIVEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AEVQKLGG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHVVAEVQKLGGQAAFIDAEHALDPVYAQKLGVNIDELLISQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+ E+EG++G +GLQARLMSQALRK++G SK
Sbjct: 123 ALEIAEALVRSGAVDVIVVDSVAALVPKNELEGDMGDSHVGLQARLMSQALRKLAGAISK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T+GG ALKF+ASVRLE+R IK +G++ VG R
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTTGGRALKFYASVRLEVRRVEAIK--QGNDVVGSRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P++Q + +I+FGEG+S+ G ++D A +D+V + GAWYSYG++RLGQGR
Sbjct: 241 RIKVVKNKVAPPFRQCDVDIMFGEGISREGSLIDIATEIDVVQKSGAWYSYGEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L+++P + E+IE VR
Sbjct: 301 ENAKQFLKEHPEIAEQIEAAVR 322
>gi|452995305|emb|CCQ93072.1| multifunctional SOS repair factor [Clostridium ultunense Esp]
Length = 350
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +ALD A++ I FGKGS+ RLG +E P+G L LD+ALG GG+P+GRI+EI
Sbjct: 6 EKNKALDMAISQIEKQFGKGSIMRLGDTKTVKMEVIPTGSLELDIALGIGGVPRGRIIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH IAE QK G A +DAEHA DP+Y+K LGVDVENLIV QPD GE
Sbjct: 66 YGPESSGKTTVALHVIAEAQKRDGIAAFIDAEHALDPNYAKKLGVDVENLIVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEI + + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 126 GLEITEALVRSGAVDIVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGAINK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T+IF+NQ+R K+GV +GNPE T+GG ALKF++S+RL++R IK +GD +G R
Sbjct: 186 SNTTVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRLDVRRVDSIK--QGDNVIGNRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RVRV K+KV+ P+KQAEF+I++G G+SK G +LD DI+ + G+WYSYG+ RLGQGR
Sbjct: 244 RVRVVKNKVAPPFKQAEFDIMYGLGISKEGNILDTGVEADIINKSGSWYSYGEHRLGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A +LR+NP + EIEK +R
Sbjct: 304 ENAKDFLRENPNITREIEKKIR 325
>gi|384135154|ref|YP_005517868.1| recA protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339289239|gb|AEJ43349.1| recA protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 354
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 250/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D++ AL+ A+ I FGKGS+ RLG A VET P+G + LD+ALG GGLP+GRIVEI
Sbjct: 3 DKKAALEQALRKIEKEFGKGSIMRLGEAAAMTVETVPTGSIALDIALGVGGLPRGRIVEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AEVQKLGG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHVVAEVQKLGGQAAFIDAEHALDPVYAQKLGVNIDELLISQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+ E+EG++G +GLQARLMSQALRK++G SK
Sbjct: 123 ALEIAEALVRSGAVDVIVVDSVAALVPKNELEGDMGDSHVGLQARLMSQALRKLAGAISK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T+GG ALKF+ASVRLE+R IK +G++ VG R
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTTGGRALKFYASVRLEVRRVEAIK--QGNDVVGSRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P++Q + +I+FGEG+S+ G ++D A +D+V + GAWYS+G++RLGQGR
Sbjct: 241 RIKVVKNKVAPPFRQCDVDIMFGEGISREGSLIDIATEIDVVQKSGAWYSFGEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL+++P + E+IE VR
Sbjct: 301 ENAKQYLKEHPEIAEQIEAAVR 322
>gi|258511453|ref|YP_003184887.1| recA protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478179|gb|ACV58498.1| recA protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 355
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 250/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D++ AL+ A+ I FGKGS+ RLG A VET P+G + LD+ALG GGLP+GRIVEI
Sbjct: 3 DKKAALEQALRKIEKEFGKGSIMRLGEAAAMTVETVPTGSIALDIALGVGGLPRGRIVEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AEVQKLGG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHVVAEVQKLGGQAAFIDAEHALDPVYAQKLGVNIDELLISQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+ E+EG++G +GLQARLMSQALRK++G SK
Sbjct: 123 ALEIAEALVRSGAVDVIVVDSVAALVPKNELEGDMGDSHVGLQARLMSQALRKLAGAISK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T+GG ALKF+ASVRLE+R IK +G++ VG R
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTTGGRALKFYASVRLEVRRVEAIK--QGNDVVGSRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P++Q + +I+FGEG+S+ G ++D A +D+V + GAWYS+G++RLGQGR
Sbjct: 241 RIKVVKNKVAPPFRQCDVDIMFGEGISREGSLIDIATEIDVVQKSGAWYSFGEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL+++P + E+IE VR
Sbjct: 301 ENAKQYLKEHPEIAEQIEAAVR 322
>gi|326773688|ref|ZP_08232971.1| recA protein [Actinomyces viscosus C505]
gi|326636918|gb|EGE37821.1| recA protein [Actinomyces viscosus C505]
Length = 413
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 250/332 (75%), Gaps = 3/332 (0%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGR 144
S+ DR +AL A+ I+ SFGKGSV RLG V P+G + LD+ALG GGLP+GR
Sbjct: 5 SQTQDRSKALATALAQIDKSFGKGSVMRLGDESRPPVSVIPTGSVALDVALGVGGLPRGR 64
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
IVE++GPESSGKTT+ALHA+A Q+ GGNA +DAEHA DP Y+KALGVD++NL+V QPD
Sbjct: 65 IVEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPD 124
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GE ALEI D + RSG +D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 125 TGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITG 184
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
S G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL++R G +K GD+ V
Sbjct: 185 ALSSTGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDVRRIGGLKD--GDQPV 242
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G R RV+V K+K++ P+KQAEF+I++G+G+S+ G +LD +V + GAW++YG+ +L
Sbjct: 243 GNRTRVKVVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQL 302
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
GQG++ A +L+DNP L EIE+ + + + G
Sbjct: 303 GQGKENARNFLKDNPQLAAEIEEKILAALGIG 334
>gi|85708968|ref|ZP_01040034.1| recombinase A [Erythrobacter sp. NAP1]
gi|85690502|gb|EAQ30505.1| recombinase A [Erythrobacter sp. NAP1]
Length = 354
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+ALDAA+ I+ +FGKGS +LGS VE+ +G L LD+ALG GGLPKGR++E
Sbjct: 14 VDRQKALDAALAQIDRAFGKGSAMKLGSKEAMQVESISTGSLGLDIALGIGGLPKGRVIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTTLALH IAE QK GG A VDAEHA DP Y+K LGVD++ L+V QPD GE
Sbjct: 74 VYGPESSGKTTLALHCIAEAQKAGGTAAFVDAEHALDPVYAKKLGVDIDELVVSQPDTGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS A+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ +
Sbjct: 134 QALEITDTLVRSNAVDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSIN 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE +G
Sbjct: 194 RSKCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKD--RDEVIGNS 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD IV + G+WYSY R+GQG
Sbjct: 252 TRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGIVEKSGSWYSYDSVRIGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A YL++NP + +++E +R
Sbjct: 312 RENAKTYLKENPEVCDKLEAAIR 334
>gi|430750238|ref|YP_007213146.1| protein RecA [Thermobacillus composti KWC4]
gi|430734203|gb|AGA58148.1| protein RecA [Thermobacillus composti KWC4]
Length = 352
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/322 (58%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG G VET PSG L LD+ALG GG+P+GRI+EI
Sbjct: 3 DRRAALEMALRQIEKQFGKGSIMKLGEQAGLTVETVPSGSLALDIALGVGGMPRGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK+GG A +DAEHA DP Y+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKIGGQAAFIDAEHALDPLYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 123 ALEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAISK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF+ASVRLE+R IK G E VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLEVRRVETIKM--GSELVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++GEG+SK G ++D +DI+ + GAW+S+ +RLGQGR
Sbjct: 241 RIKVVKNKVAPPFKQAEIDIMYGEGISKEGSLIDIGTELDIIQKSGAWFSFEGERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL+D P + +IEK +R
Sbjct: 301 ENAKQYLKDRPDIAAKIEKQIR 322
>gi|298490120|ref|YP_003720297.1| recA protein ['Nostoc azollae' 0708]
gi|298232038|gb|ADI63174.1| recA protein ['Nostoc azollae' 0708]
Length = 359
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/328 (59%), Positives = 255/328 (77%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 11 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 70
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GE L
Sbjct: 71 PESSGKTTVALHAIAEVQKNGGIAAFVDAEHALDPTYAGALGVDIENLLVSQPDTGEAGL 130
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 131 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDTHVGLQARLMSQALRKITGNIGKSG 190
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 191 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGSDEFGNRVKV 248
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE +++RKGAWYSY + + QGRD
Sbjct: 249 KVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGVLLRKGAWYSYNGENISQGRDN 308
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + ++I ++V + G+V
Sbjct: 309 AIRYLEEKTEFADKIRELVCEKLDKGAV 336
>gi|163843467|ref|YP_001627871.1| recombinase A [Brucella suis ATCC 23445]
gi|189039592|sp|B0CH00.1|RECA_BRUSI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|163674190|gb|ABY38301.1| recA protein [Brucella suis ATCC 23445]
Length = 361
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE +G
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVMGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|83594151|ref|YP_427903.1| recombinase A [Rhodospirillum rubrum ATCC 11170]
gi|386350903|ref|YP_006049151.1| recombinase A [Rhodospirillum rubrum F11]
gi|123766962|sp|Q2RQH9.1|RECA_RHORT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|83577065|gb|ABC23616.1| RecA protein [Rhodospirillum rubrum ATCC 11170]
gi|346719339|gb|AEO49354.1| recombinase A [Rhodospirillum rubrum F11]
Length = 366
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/329 (57%), Positives = 251/329 (76%), Gaps = 4/329 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
D +D+Q+AL+AA+ I +FGKGS+ +LG G + +E+ +G L LD+ALG GGLP+
Sbjct: 10 DKDTMDKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLALH +AE QK GG VDAEHAFDP Y++ LGV +++L+V Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEIAD + RSGAID++ +DSV+AL P+AE+EG++G +GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G S++ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G +K +E
Sbjct: 190 TGTVSRSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKD--KEE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+KV+ P+K EF+I++GEG+SKLG MLD +I+ + GAW+SY
Sbjct: 248 VVGNQTRVKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGAWFSYNST 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
R+GQGR+ A Q+LRDNP + EEIE VR+
Sbjct: 308 RIGQGRENAKQFLRDNPAMAEEIENAVRA 336
>gi|414078083|ref|YP_006997401.1| recombinase A [Anabaena sp. 90]
gi|413971499|gb|AFW95588.1| RecA protein [Anabaena sp. 90]
Length = 357
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/328 (58%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL+ + I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALNIVLGQIERSFGKGAIMRLGDATRMKVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHA+AEVQ+ GG A VDAEHA DP+Y+ ALGVD++NL+V QPDNGE AL
Sbjct: 70 PESSGKTTVALHALAEVQRNGGIAAFVDAEHALDPTYAAALGVDIDNLLVSQPDNGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDIHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS +GC++D AE +++RKGAWYSY + + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGVSTIGCLVDIAEETGVLLRKGAWYSYSGENISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P ++++ V + G+V
Sbjct: 308 AIKYLEEKPEFAAKVKEQVLEKLDKGAV 335
>gi|343131436|gb|AEL89245.1| recombinase A, partial [Ochrobactrum pecoris]
gi|343131438|gb|AEL89246.1| recombinase A, partial [Ochrobactrum pecoris]
Length = 355
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ +DSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYLRDNP EIE +R
Sbjct: 312 GRENAKQYLRDNPETAREIETTLR 335
>gi|440681335|ref|YP_007156130.1| Protein recA [Anabaena cylindrica PCC 7122]
gi|428678454|gb|AFZ57220.1| Protein recA [Anabaena cylindrica PCC 7122]
Length = 364
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/328 (59%), Positives = 254/328 (77%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 14 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 73
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD+ NL+V QPD GE L
Sbjct: 74 PESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYAAALGVDINNLLVSQPDTGEAGL 133
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 134 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDIHVGLQARLMSQALRKITGNIGKSG 193
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 194 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEFGNRVKV 251
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE I++RKGAWYSY + QGRD
Sbjct: 252 KVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILLRKGAWYSYNGDNISQGRDN 311
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + E+I+++V + G++
Sbjct: 312 AIKYLEEKQEFAEKIKELVLEKLDKGAI 339
>gi|361049809|emb|CCE21614.1| recombinase A, partial [Brucella sp. 4986/3]
Length = 348
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 1 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALR+++G+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRELTGSI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 181 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 299 GRENAKQYLKDNPEVAREIETTLR 322
>gi|320534660|ref|ZP_08035104.1| protein RecA [Actinomyces sp. oral taxon 171 str. F0337]
gi|320133135|gb|EFW25639.1| protein RecA [Actinomyces sp. oral taxon 171 str. F0337]
Length = 412
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/332 (55%), Positives = 250/332 (75%), Gaps = 3/332 (0%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGR 144
S+ DR +AL A+ I+ SFGKGSV RLG V P+G + LD+ALG GGLP+GR
Sbjct: 5 SQTQDRSKALATALAQIDKSFGKGSVMRLGDDTRPPVSVIPTGSVALDVALGVGGLPRGR 64
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
I+E++GPESSGKTT+ALHA+A Q+ GGNA +DAEHA DP Y+KALGVD++NL+V QPD
Sbjct: 65 IIEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPD 124
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GE ALEI D + RSG +D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 125 TGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITG 184
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
S G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL++R G +K GD+ V
Sbjct: 185 ALSSTGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDVRRIGGLKD--GDQPV 242
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G R RV+V K+K++ P+KQAEF+I++G+G+S+ G +LD +V + GAW++YG+ +L
Sbjct: 243 GNRTRVKVVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQL 302
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
GQG++ A +L+DNP L EIE+ + + + G
Sbjct: 303 GQGKENARNFLKDNPQLAAEIEEKILAALGIG 334
>gi|114797171|ref|YP_761421.1| recA protein [Hyphomonas neptunium ATCC 15444]
gi|114737345|gb|ABI75470.1| recA protein [Hyphomonas neptunium ATCC 15444]
Length = 356
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 250/323 (77%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+Q+AL+ A+ +I SFGKGSV RLG +E +G L LD+ALG GGLPKGRI+E
Sbjct: 7 VDKQKALETALGNIERSFGKGSVMRLGDKKTLDIEAVSTGSLGLDIALGIGGLPKGRIIE 66
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTTL+LH +AE QK GG +DAEHA DP Y+ LGVD+++L++ QPD GE
Sbjct: 67 IFGPESSGKTTLSLHCVAEAQKNGGVCAFIDAEHALDPVYASKLGVDLDDLLISQPDTGE 126
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+DL+ +DSV+ALTPRAEIEGE+G Q GLQARLMSQALRK++G+ S
Sbjct: 127 QALEIADTLVRSGAVDLVVIDSVAALTPRAEIEGEMGDQLPGLQARLMSQALRKLTGSIS 186
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR G+IK +E +G +
Sbjct: 187 KSKCMVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGQIKDR--EEVIGNQ 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++Q EF+II+GEG+SK G ++D ++V + G+W+SY +R+GQG
Sbjct: 245 TRVKVVKNKVAPPFRQVEFDIIYGEGISKTGELVDLGVKANVVEKSGSWFSYNGERIGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+KA Q+L+DNP + EIE VR
Sbjct: 305 REKARQFLKDNPAVANEIEDAVR 327
>gi|343131434|gb|AEL89244.1| recombinase A, partial [Ochrobactrum pecoris]
Length = 355
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ +DSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYLRDNP EIE +R
Sbjct: 312 GRENAKQYLRDNPETAREIETTLR 335
>gi|90818644|emb|CAJ32627.1| recombinase A [Ochrobactrum anthropi]
gi|90818646|emb|CAJ32628.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|167752109|ref|ZP_02424236.1| hypothetical protein ALIPUT_00351 [Alistipes putredinis DSM 17216]
gi|167660350|gb|EDS04480.1| RecA protein [Alistipes putredinis DSM 17216]
Length = 338
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 249/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ + L+A M I FGKGS+ R+ SA A V+ P+G +TLD+ALG GG PKGR++EI
Sbjct: 10 DKLKVLNAVMEKIEKDFGKGSIMRMSSAEVADVQVIPTGSITLDMALGVGGYPKGRVIEI 69
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA+HAIAE QK GG A +DAEHAFD SY++ LGVDV+NL++ QPDNGE
Sbjct: 70 YGPESSGKTTLAIHAIAEAQKAGGIAAFIDAEHAFDSSYAQQLGVDVDNLLISQPDNGEQ 129
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RS AID+I +DSV+ALTP+AEIEGE+G ++GLQARLMSQALRK++ + SK
Sbjct: 130 ALEIADSLIRSSAIDIIVIDSVAALTPKAEIEGEMGDAKMGLQARLMSQALRKLTSSISK 189
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQ+R KIGV YGNPE T+GG ALKF+ASVR++IR IK G+E +G R
Sbjct: 190 TKTVCIFINQLRDKIGVVYGNPETTTGGNALKFYASVRIDIRRVSVIKD--GEEQLGTRT 247
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+K+AEF+I+FGEG+SK+G ++D I+ + G+W+SYGD+++GQGR
Sbjct: 248 RVKVVKNKVAPPFKKAEFDIMFGEGISKIGEIIDLGVDYGIIKKSGSWFSYGDRKIGQGR 307
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
D + L+++ L+ E+E VR M
Sbjct: 308 DSVKELLKNDEALRNEVEAKVREAM 332
>gi|90818650|emb|CAJ32630.1| recombinase A [Ochrobactrum anthropi]
gi|90818652|emb|CAJ32631.1| recombinase A [Ochrobactrum anthropi]
gi|90818666|emb|CAJ32638.1| recombinase A [Ochrobactrum intermedium]
Length = 355
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|444310432|ref|ZP_21146054.1| recombinase A [Ochrobactrum intermedium M86]
gi|443486240|gb|ELT49020.1| recombinase A [Ochrobactrum intermedium M86]
Length = 361
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>gi|333979772|ref|YP_004517717.1| recombinase A [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823253|gb|AEG15916.1| Protein recA [Desulfotomaculum kuznetsovii DSM 6115]
Length = 343
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/334 (55%), Positives = 252/334 (75%), Gaps = 3/334 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ + L+A ++ I +FGKG++ RLG VE P+G L+LD+ALG GG+P+GR+VEI
Sbjct: 4 EKLKVLEATLSKIEQNFGKGAIMRLGETARLNVEVIPTGALSLDIALGVGGVPRGRVVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+K LGVD+ENL+V QPD GE
Sbjct: 64 FGPESSGKTTVALHIIAEAQKAGGIAAFIDAEHALDPVYAKNLGVDIENLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ +DSV+AL P+AEIEGE+G Q+GLQARLMSQALRK++G SK
Sbjct: 124 ALEICEALVRSGAIDVVVIDSVAALVPKAEIEGEMGELQVGLQARLMSQALRKLTGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQ+R K+GV +GNPE T GG ALKF+ASVRLE+R +K +G + +G R
Sbjct: 184 SRTTAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLEVRKLEALK--QGSDIIGCRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQA+F+I++G G+S+ G +LD A M I+ + G WYSYG++RLGQGR
Sbjct: 242 RVKVVKNKLAPPFKQADFDIMYGLGISREGTLLDLATEMKIITKSGTWYSYGEERLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
+ +YLRD+P + +EIE+ +R + G + S
Sbjct: 302 ENVKEYLRDHPEVAQEIEQKIRQQLQMGGIKMPS 335
>gi|310658983|ref|YP_003936704.1| DNA strand exchange and recombination protein with protease and
nuclease activity [[Clostridium] sticklandii]
gi|308825761|emb|CBH21799.1| DNA strand exchange and recombination protein with protease and
nuclease activity [[Clostridium] sticklandii]
Length = 350
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 248/327 (75%), Gaps = 3/327 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
+ R ++++ALDAA+ I FGKGS+ LG +ET +G + LD+A+G GGLPKG
Sbjct: 3 EKRMEEKRKALDAAIAKIEKDFGKGSIMTLGENAKMNIETISTGSIGLDVAIGIGGLPKG 62
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RIVEI+GPESSGKTT+ALHA+AE QKLGG A VDAEHA DP Y+KALGVD++ LIV QP
Sbjct: 63 RIVEIYGPESSGKTTVALHAVAEAQKLGGIAAFVDAEHALDPVYAKALGVDIDKLIVSQP 122
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEI + + RSGAID+I VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++
Sbjct: 123 DTGEQALEITESLVRSGAIDIIVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLA 182
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
G+ +K+ IF+NQ+R K+GV +GNPE T+GG ALKF+ASVRL++R IK +GD
Sbjct: 183 GSINKSKTITIFINQLREKVGVMFGNPETTTGGRALKFYASVRLDVRKIDIIK--QGDTM 240
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
+G R RV+V K+KV+ P+KQ EF+I++G+G+SK+G ++D +DI+ + GAWYSY ++R
Sbjct: 241 LGSRTRVKVVKNKVAPPFKQCEFDIMYGQGISKVGELVDIGANLDIIKKSGAWYSYNEER 300
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVR 410
LGQGR+ Q+ +NP L E+E VR
Sbjct: 301 LGQGRENVKQFFMENPELMNEVESKVR 327
>gi|393770644|ref|ZP_10359123.1| recombination protein RecA [Novosphingobium sp. Rr 2-17]
gi|392723991|gb|EIZ81377.1| recombination protein RecA [Novosphingobium sp. Rr 2-17]
Length = 356
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 248/324 (76%), Gaps = 3/324 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+AL+AA+ I+ +FGKGS +LGS VE+ +G L LD+ALG GGLP+GR++E
Sbjct: 17 MDRQKALEAALAQIDKAFGKGSAMKLGSKETMQVESISTGSLGLDIALGVGGLPRGRVIE 76
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH IAE QK GG A +DAEHA DP Y+K LGV+++ LIV QPD GE
Sbjct: 77 IYGPESSGKTTLALHVIAEAQKTGGTAAFIDAEHALDPVYAKKLGVNIDELIVSQPDTGE 136
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ S
Sbjct: 137 QALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSIS 196
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE VG
Sbjct: 197 RSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKD--RDEIVGNA 254
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEGVSK+G +LD IV + GAW+SY R+GQG
Sbjct: 255 TRVKVVKNKVAPPFKQVEFDIMYGEGVSKIGEILDLGVKAGIVEKSGAWFSYDSIRIGQG 314
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ + YL+ NP + + IE+ +R+
Sbjct: 315 RENSKTYLKQNPEVCDRIEQAIRT 338
>gi|254479108|ref|ZP_05092460.1| protein RecA [Carboxydibrachium pacificum DSM 12653]
gi|214034957|gb|EEB75679.1| protein RecA [Carboxydibrachium pacificum DSM 12653]
Length = 341
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/324 (55%), Positives = 250/324 (77%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+AL+ A++ I FGKG++ RLG VE P+G L LD+ALG GG+P+GRI+
Sbjct: 1 MIEKQKALEMAISQIERQFGKGAIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH IAE QK+GG +DAEHA DP Y+K LGV++++L+V QPD G
Sbjct: 61 EIFGPESSGKTTLALHMIAEAQKIGGTGAFIDAEHALDPVYAKNLGVNIDDLLVAQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 121 EQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGVT 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ ++F+NQ+R K+GV +GNPE T GG ALKF+A++RL++R IK +G+E VG
Sbjct: 181 SKSKSIVVFINQLREKVGVMFGNPETTPGGRALKFYATIRLDVRKVDNIK--QGNEIVGS 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+K++ P+KQAEF+I++GEG+S+ G +LD +DI+ + G+WYSY D +LGQ
Sbjct: 239 RTRVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDLGTALDIIEKSGSWYSYKDIKLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L++N + EEIE+ +R
Sbjct: 299 GRENAKQFLKENKEIAEEIERKIR 322
>gi|260752406|ref|YP_003225299.1| recombinase A [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258551769|gb|ACV74715.1| recA protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 354
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 253/331 (76%), Gaps = 3/331 (0%)
Query: 81 SDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GG 139
+ SG +D+Q+AL+AA+ I+ +FGKGSV RLGS ++T SG L LD+ALG GG
Sbjct: 8 TTSGKDNNMDKQKALEAALAQIDRAFGKGSVMRLGSREKIEIDTISSGSLGLDIALGIGG 67
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
LP+GRIVEI+G ESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGV+ ++LI
Sbjct: 68 LPRGRIVEIYGHESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLI 127
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
V QPD GE ALEI D + RS A+D++ VDSV+ALTPRAEIEGE+G +GLQARLMSQAL
Sbjct: 128 VSQPDTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQAL 187
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK++G+ +++ +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR G+IK
Sbjct: 188 RKITGSINRSQTLVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRVGQIKD-- 245
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
DE VG RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD I+ + G+W+S+
Sbjct: 246 RDEIVGNATRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIIDKSGSWFSH 305
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A +LR++P + E+IEK++R
Sbjct: 306 DSVRIGQGRENAKTFLREHPEMTEKIEKMIR 336
>gi|24212187|sp|Q8RA55.2|RECA_THETN RecName: Full=Protein RecA; AltName: Full=Recombinase A
Length = 342
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/324 (55%), Positives = 250/324 (77%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+AL+ A++ I FGKG++ RLG VE P+G L LD+ALG GG+P+GRI+
Sbjct: 2 MIEKQKALEMAISQIERQFGKGAIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRII 61
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH IAE QK+GG +DAEHA DP Y+K LGV++++L+V QPD G
Sbjct: 62 EIFGPESSGKTTLALHMIAEAQKIGGTGAFIDAEHALDPVYAKNLGVNIDDLLVAQPDTG 121
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 122 EQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGVT 181
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ ++F+NQ+R K+GV +GNPE T GG ALKF+A++RL++R IK +G+E VG
Sbjct: 182 SKSKSIVVFINQLREKVGVMFGNPETTPGGRALKFYATIRLDVRKVDNIK--QGNEIVGS 239
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+K++ P+KQAEF+I++GEG+S+ G +LD +DI+ + G+WYSY D +LGQ
Sbjct: 240 RTRVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDLGTALDIIEKSGSWYSYKDIKLGQ 299
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L++N + EEIE+ +R
Sbjct: 300 GRENAKQFLKENKEIAEEIERKIR 323
>gi|114775363|ref|ZP_01450931.1| recombinase A [Mariprofundus ferrooxydans PV-1]
gi|114553474|gb|EAU55855.1| recombinase A [Mariprofundus ferrooxydans PV-1]
Length = 336
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/325 (58%), Positives = 247/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALD A++ I FGKG+V RLG V PSG L LD ALG GG P+GR++EI
Sbjct: 3 DKSKALDTALSQIERQFGKGTVMRLGDHAKVPVSVVPSGSLALDAALGVGGYPRGRVIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE QKLGG A VDAEHA DPSY++ LGVDV+NL+V QPD+GE
Sbjct: 63 YGPESSGKTTMALHAIAEAQKLGGQAAFVDAEHALDPSYAERLGVDVDNLLVSQPDSGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSG +D+I VDSV+ALTP+AE+EG++G +GLQARLMSQALRK++G+ ++
Sbjct: 123 ALEIVDMLTRSGGVDIIVVDSVAALTPKAELEGDMGDSHMGLQARLMSQALRKLTGSIAR 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL++R G IK KGDE +G
Sbjct: 183 SNTIIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDVRRIGAIK--KGDEVMGNDT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQA+F I++GEGVS G +LD +V + GAWY+ G++R+GQGR
Sbjct: 241 RVKVVKNKVAPPFKQAQFSIMYGEGVSHAGEVLDMGVQYGLVNKSGAWYACGNERIGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
D A+ YL+++P + EIE VR +
Sbjct: 301 DNAMTYLKEHPEMLAEIETGVREAL 325
>gi|329947478|ref|ZP_08294680.1| RecA protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328524757|gb|EGF51812.1| RecA protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 413
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/332 (55%), Positives = 250/332 (75%), Gaps = 3/332 (0%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGR 144
S+ DR +AL A+ I+ SFGKGSV RLG V P+G + LD+ALG GGLP+GR
Sbjct: 5 SQTQDRSKALATALAQIDKSFGKGSVMRLGDDTRPPVSVIPTGSVALDVALGVGGLPRGR 64
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
I+E++GPESSGKTT+ALHA+A Q+ GGNA +DAEHA DP Y+KALGVD++NL+V QPD
Sbjct: 65 IIEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPD 124
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GE ALEI D + RSG +D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 125 TGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITG 184
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
S G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL++R G +K GD+ V
Sbjct: 185 ALSSTGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDVRRIGGLKD--GDQPV 242
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G R RV+V K+K++ P+KQAEF+I++G+G+S+ G +LD +V + GAW++YG+ +L
Sbjct: 243 GNRTRVKVVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQL 302
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
GQG++ A +L+DNP L EIE+ + + + G
Sbjct: 303 GQGKENARNFLKDNPQLAAEIEEKILAALGIG 334
>gi|262370234|ref|ZP_06063560.1| recombinase A [Acinetobacter johnsonii SH046]
gi|381196442|ref|ZP_09903784.1| recombinase A [Acinetobacter lwoffii WJ10621]
gi|262314576|gb|EEY95617.1| recombinase A [Acinetobacter johnsonii SH046]
Length = 347
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 251/325 (77%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIAE QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+++A F+I++G+GV+ LG ++D A +IV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++L +NP L E IEK++R +
Sbjct: 302 NNVIRHLEENPQLAETIEKIIREKL 326
>gi|114707287|ref|ZP_01440184.1| recombinase A [Fulvimarina pelagi HTCC2506]
gi|114537168|gb|EAU40295.1| recombinase A [Fulvimarina pelagi HTCC2506]
Length = 357
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ +LG ++ VET +G L LD+ALG GGLPKGR++
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMKLGQNNQSVEVETVSTGSLGLDIALGIGGLPKGRVI 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL+V QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLVSQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G G+QARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE G
Sbjct: 194 SRSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKDR--DEVTGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ +V+V K+K++ P+KQ EF+I++GEGVSK+G ++D IV + GAW+SY QRLGQ
Sbjct: 252 QTKVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELIDLGVKSGIVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LRDNP +EIE+ +R
Sbjct: 312 GRENAKQFLRDNPDAAQEIEQSIR 335
>gi|400293076|ref|ZP_10794961.1| RecA protein [Actinomyces naeslundii str. Howell 279]
gi|399901782|gb|EJN84652.1| RecA protein [Actinomyces naeslundii str. Howell 279]
Length = 413
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/332 (55%), Positives = 250/332 (75%), Gaps = 3/332 (0%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGR 144
S+ DR +AL A+ I+ +FGKGSV RLG V P+G + LD+ALG GGLP+GR
Sbjct: 5 SQTQDRSKALATALAQIDKNFGKGSVMRLGDDTRPPVSVIPTGSVALDVALGVGGLPRGR 64
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
I+E++GPESSGKTT+ALHA+A Q+ GGNA +DAEHA DP Y+KALGVD++NL+V QPD
Sbjct: 65 IIEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPD 124
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GE ALEI D + RSG +D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 125 TGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITG 184
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
S G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL++R G +K GD+ V
Sbjct: 185 ALSSTGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDVRRIGGLKD--GDQPV 242
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G R RV+V K+K++ P+KQAEF+I++G+G+S+ G +LD +V + GAW++YG+ +L
Sbjct: 243 GNRTRVKVVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQL 302
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
GQG++ A +L+DNP L EIE+ + + + G
Sbjct: 303 GQGKENARNFLKDNPQLAAEIEEKILAALGIG 334
>gi|212726671|gb|AAM50050.2| recombinase A [Zymomonas mobilis subsp. mobilis]
Length = 354
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 253/331 (76%), Gaps = 3/331 (0%)
Query: 81 SDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GG 139
+ SG +D+Q+AL+AA+ I+ +FGKGSV RLGS ++T SG L LD+ALG GG
Sbjct: 8 TTSGKDNNMDKQKALEAALAQIDRAFGKGSVMRLGSREKIEIDTISSGSLGLDIALGIGG 67
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
LP+GRIVEI+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGV+ ++LI
Sbjct: 68 LPRGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLI 127
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
V QPD GE ALEI D + RS A+D++ VDSV+ALTPRAEIEGE+G +GLQARLMSQAL
Sbjct: 128 VSQPDTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQAL 187
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK++G+ +++ +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR G+IK
Sbjct: 188 RKITGSINRSQTLVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRVGQIKD-- 245
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
DE VG RV+V K+K++ +KQ EF+I++GEGVSK+G +LD I+ + G+W+S+
Sbjct: 246 RDEIVGNATRVKVVKNKLAPRFKQVEFDIMYGEGVSKMGEILDLGVKAGIIDKSGSWFSH 305
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A +LR++P + E+IEK++R
Sbjct: 306 DSVRIGQGRENAKTFLREHPEMTEKIEKMIR 336
>gi|225388512|ref|ZP_03758236.1| hypothetical protein CLOSTASPAR_02248 [Clostridium asparagiforme
DSM 15981]
gi|225045443|gb|EEG55689.1| hypothetical protein CLOSTASPAR_02248 [Clostridium asparagiforme
DSM 15981]
Length = 375
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 262/347 (75%), Gaps = 11/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ I ++GKGSV +LG +G + +ET P+G ++LD+ALG GG+PKGRI+E
Sbjct: 25 DKLKALDAALTQIEKAYGKGSVMKLGDSGANMNIETVPTGSISLDIALGLGGVPKGRIIE 84
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPDNGE
Sbjct: 85 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGE 144
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++ S
Sbjct: 145 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVIS 204
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF++SVRL++R +K +G E +G R
Sbjct: 205 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRLDVRRIETLK--QGGEVIGNR 262
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VRV+V K+K++ P+K+AEF+I+FG+G+S+ G +LD A +I+ + GAW++Y ++GQG
Sbjct: 263 VRVKVVKNKIAPPFKEAEFDIMFGKGISREGDILDLAAKDNIIEKSGAWFAYNGSKIGQG 322
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
R+ A QYL DNP + E+E+ VR+ H+G LP +EE
Sbjct: 323 RENAKQYLADNPDILAEVEEKVRTKYGLAPSHEG-------LPQREE 362
>gi|148927934|ref|ZP_01811340.1| recA protein [candidate division TM7 genomosp. GTL1]
gi|147886723|gb|EDK72287.1| recA protein [candidate division TM7 genomosp. GTL1]
Length = 343
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 246/322 (76%), Gaps = 2/322 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPE 152
+AL A+ I FG GS+ +LG + A VE PSG L+LD+ALGGG PKGR++EI+GPE
Sbjct: 20 KALGLAVEQITKQFGDGSIMKLGESHRAHVELIPSGALSLDIALGGGYPKGRVIEIYGPE 79
Query: 153 SSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEI 212
SSGKTTL LHAIAEVQK GG A +DAEHA DP+Y+K LGVD +NL+V QPDNGE ALEI
Sbjct: 80 SSGKTTLTLHAIAEVQKKGGTAAFIDAEHALDPAYAKKLGVDTDNLLVSQPDNGEQALEI 139
Query: 213 ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCT 272
A+ + RS A+DLI VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++G SK+ T
Sbjct: 140 AETLVRSNAVDLIVVDSVAALVPQAEIDGEMGDSHMGLQARLMSQALRKLTGIISKSKAT 199
Query: 273 LIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRV 332
+IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG+IK G++ +G R +V+V
Sbjct: 200 VIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGQIKV--GEDVIGNRTKVKV 257
Query: 333 QKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKAL 392
K+K++ P++ AEF+I++ EG+SK G +LD A I+ + GAW+ Y D ++GQGR+
Sbjct: 258 VKNKIAAPFRVAEFDIMYNEGISKTGDVLDLAVQHGIIGKSGAWFDYKDAKIGQGREATK 317
Query: 393 QYLRDNPLLQEEIEKVVRSMMS 414
+YL+D P + E+E+ VR ++
Sbjct: 318 KYLKDEPKVMAEVEQKVRDKVA 339
>gi|307945635|ref|ZP_07660971.1| protein RecA [Roseibium sp. TrichSKD4]
gi|307771508|gb|EFO30733.1| protein RecA [Roseibium sp. TrichSKD4]
Length = 355
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/327 (58%), Positives = 251/327 (76%), Gaps = 3/327 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
+S +D+ +ALDAA++ I +FGKGS+ R+G V++ +G L LD+ALG GGLPKG
Sbjct: 10 ESSQMDKTKALDAALSQIERAFGKGSIMRMGQGQAVEVQSVSTGSLGLDIALGIGGLPKG 69
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RIVEI+GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGV++++L++ QP
Sbjct: 70 RIVEIYGPESSGKTTLALHTVAEAQKTGGICAFVDAEHALDPIYARKLGVNIDDLLISQP 129
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEIAD + RSGAID++ +DSV+ALTP+AE+EGE+G G+QARLMSQALRK++
Sbjct: 130 DAGEQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLT 189
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
+ SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE
Sbjct: 190 ASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKDR--DEV 247
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
VG + RV+V K+K++ P++Q EF+II+GEGVSK+G ++D IV + GAW+SY QR
Sbjct: 248 VGNQTRVKVVKNKLAPPFRQVEFDIIYGEGVSKMGELIDLGVKGGIVEKSGAWFSYNSQR 307
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVR 410
LGQGR+ A Q+LRDNP + EEIE VR
Sbjct: 308 LGQGRENAKQFLRDNPEIAEEIELAVR 334
>gi|255318935|ref|ZP_05360160.1| protein RecA [Acinetobacter radioresistens SK82]
gi|262378327|ref|ZP_06071484.1| recA protein [Acinetobacter radioresistens SH164]
gi|255303952|gb|EET83144.1| protein RecA [Acinetobacter radioresistens SK82]
gi|262299612|gb|EEY87524.1| recA protein [Acinetobacter radioresistens SH164]
Length = 348
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 252/325 (77%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE +G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIIGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+GV+ LG ++D A +I+ + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEALFQILYGKGVNHLGELIDLAVQQEIIQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++L +NP L E+E+++R ++
Sbjct: 302 NNVIRHLEENPELAVEVERLIRELL 326
>gi|398831799|ref|ZP_10589975.1| protein RecA [Phyllobacterium sp. YR531]
gi|398211501|gb|EJM98119.1| protein RecA [Phyllobacterium sp. YR531]
Length = 364
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERSFGKGSIMRLGRNEQVVEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ +DSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSLK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D +V + G+W+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGLVEKSGSWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GRD A +L++NP L EIE +R
Sbjct: 312 GRDNAKLFLKENPDLANEIELAIR 335
>gi|452752974|ref|ZP_21952713.1| RecA protein [alpha proteobacterium JLT2015]
gi|451959796|gb|EMD82213.1| RecA protein [alpha proteobacterium JLT2015]
Length = 347
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+Q+ALDAA+ I+ +FGKGS +LG +E +G + LDLALG GG P+GRI+E
Sbjct: 12 MDKQKALDAALAQIDRAFGKGSAMKLGQQEKQEIEAISTGSIGLDLALGVGGFPRGRIIE 71
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGVD++ LIV QPD GE
Sbjct: 72 IYGPESSGKTTLALHAIAEAQKTGGTAAFVDAEHALDPIYAKKLGVDIDELIVSQPDTGE 131
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS A+D++ VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++G+ +
Sbjct: 132 QALEITDTLVRSNAVDVLVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKLTGSIN 191
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ T+IF+NQ+R KIGV YGNPE T+GG ALKF+AS RL+IR TG+IK DE VG
Sbjct: 192 RSRTTVIFINQVRMKIGVMYGNPETTTGGNALKFYASCRLDIRRTGQIKDR--DEIVGNT 249
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++Q EF+I++GEG+SK G +LD IV + GAW+SY R+GQG
Sbjct: 250 TRVKVVKNKVAPPFRQVEFDIMYGEGISKTGEILDLGVKAGIVEKAGAWFSYDSTRIGQG 309
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +L +NP + + IEK +R
Sbjct: 310 RENAKTFLNENPEMLDRIEKAIR 332
>gi|342732418|ref|YP_004771257.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384455827|ref|YP_005668422.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417964690|ref|ZP_12606377.1| Protein recA [Candidatus Arthromitus sp. SFB-4]
gi|417969040|ref|ZP_12610005.1| Protein recA [Candidatus Arthromitus sp. SFB-co]
gi|418016167|ref|ZP_12655732.1| recombination protein A [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418372685|ref|ZP_12964777.1| Protein RecA [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329873|dbj|BAK56515.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345506502|gb|EGX28796.1| recombination protein A [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984170|dbj|BAK79846.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380338611|gb|EIA27488.1| Protein recA [Candidatus Arthromitus sp. SFB-co]
gi|380340558|gb|EIA29135.1| Protein recA [Candidatus Arthromitus sp. SFB-4]
gi|380342354|gb|EIA30799.1| Protein RecA [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 357
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
LD+ +A++ AM+ I +GKGS+ +LG +E+ +GCL LD+ALG GGLPKGRI+E
Sbjct: 5 LDKMKAIEMAMSQIEKQYGKGSIMKLGEQSALNIESVSTGCLDLDIALGIGGLPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH IAE QK GG A +DAEHA DPSY+K LGVD ENLI+ QPDNGE
Sbjct: 65 VYGPESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +
Sbjct: 125 QALEIAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGHIN 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C IF+NQ+R K+GV +GNPE T GG ALKF+ASVRL++R IK +GDE VG R
Sbjct: 185 KSKCVAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRRIDSIK--QGDEIVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P++ +EF+II+ G+SK G +LD A +I+ + G+W+SY +++LGQG
Sbjct: 243 TRVKIMKNKVAPPFRISEFDIIYNRGISKEGSLLDLAVKENIIQKSGSWFSYKNEKLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
R+ A Q+L +N + +EIE+++
Sbjct: 303 RENAKQFLLENKSILQEIERLI 324
>gi|347542477|ref|YP_004857114.1| recombinase A [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985513|dbj|BAK81188.1| recombinase A [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 356
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 248/322 (77%), Gaps = 3/322 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
LD+ +A++ AM+ I +GKGS+ +LG +E+ +GCL LD+ALG GGLPKGRI+E
Sbjct: 5 LDKMKAIEIAMSQIEKQYGKGSIMKLGEQSALNIESVSTGCLDLDIALGIGGLPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH IAE QK GG A +DAEHA DPSY+K LGVD ENLI+ QPDNGE
Sbjct: 65 VYGPESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +
Sbjct: 125 QALEIAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGHIN 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C IF+NQ+R K+GV +GNPE T GG ALKF+ASVRL++R IK +GDE VG R
Sbjct: 185 KSKCVAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRRIDSIK--QGDEIVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P++ +EF+II+ +G+SK G +LD A +I+ + G+W+SY +++LGQG
Sbjct: 243 TRVKIMKNKVAPPFRISEFDIIYNKGISKEGSLLDLAVKENIIQKSGSWFSYKNEKLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
R+ A Q+L +N + EIE ++
Sbjct: 303 RENAKQFLLENKAILREIETLI 324
>gi|163759602|ref|ZP_02166687.1| recombinase A [Hoeflea phototrophica DFL-43]
gi|162283199|gb|EDQ33485.1| recombinase A [Hoeflea phototrophica DFL-43]
Length = 360
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 252/328 (76%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +ALDAA++ I SFGKGS+ +LG+ + +ET P+G L LD+ALG GGLPK
Sbjct: 10 EEKSVDKSKALDAALSQIERSFGKGSIMKLGANESVVEIETIPTGSLGLDIALGVGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG +DAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ +DSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGALDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + DE
Sbjct: 190 TASISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--ERDE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VTGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ + Q+LRDNP + EEIE ++R
Sbjct: 308 RLGQGRENSKQFLRDNPAVAEEIELLLR 335
>gi|317132915|ref|YP_004092229.1| recA protein [Ethanoligenens harbinense YUAN-3]
gi|315470894|gb|ADU27498.1| recA protein [Ethanoligenens harbinense YUAN-3]
Length = 400
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/323 (57%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+Q+AL A+ +I FGKG+V RLG V + +G ++LDLALG GG+P+GRIVEI
Sbjct: 18 DKQKALATALANIEKQFGKGAVMRLGQNAAMNVASISTGSVSLDLALGIGGVPRGRIVEI 77
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH IA+ QK GG+A +DAEHA DP Y+KALGVDV+ L+V QPDNGE
Sbjct: 78 YGPESSGKTTVALHIIAQAQKAGGSAAFIDAEHALDPVYAKALGVDVDALLVSQPDNGEQ 137
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++G SK
Sbjct: 138 ALEIAEALVRSGAIDVLVVDSVAALVPRAEIEGDMGDSHVGLQARLMSQALRKLAGALSK 197
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C +F+NQ+R K+GV YGNPEVT+GG ALKF++SVR+++R IK+ GDE +G R
Sbjct: 198 FNCAAVFINQLREKVGVVYGNPEVTTGGRALKFYSSVRMDVRKKEAIKN--GDEVIGTRT 255
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V++ K+KV+ P+K AEF+I++G G+S G +LD A DI+ + G+W+SY D+RLGQGR
Sbjct: 256 KVKIVKNKVAPPFKVAEFDIMYGTGISHEGEILDLAVEKDIIHKSGSWFSYQDRRLGQGR 315
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
D + L ++P L EEIEK VR+
Sbjct: 316 DNVKKLLEEDPALAEEIEKQVRA 338
>gi|114328048|ref|YP_745205.1| recombinase A [Granulibacter bethesdensis CGDNIH1]
gi|84620800|gb|ABC59514.1| RecA [Granulibacter bethesdensis CGDNIH1]
gi|114316222|gb|ABI62282.1| recA protein [Granulibacter bethesdensis CGDNIH1]
Length = 351
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/348 (55%), Positives = 258/348 (74%), Gaps = 10/348 (2%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGA-LVETFPSGCLTLDLALG-GGLPKGRIV 146
+++ +ALDAA+ I SFGKGS+ R+G+ A +E PSG L LDLALG GG+P+GRIV
Sbjct: 7 MEKNKALDAALAQIERSFGKGSIMRMGARNVAEQIEVIPSGSLGLDLALGIGGMPRGRIV 66
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGVDV+NL++ QPD G
Sbjct: 67 EIYGPESSGKTTLALHTVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDAG 126
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK++G+
Sbjct: 127 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSV 186
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+++ TLIFLNQIR KIGV +G+PE T+GG ALKF+ASVR +IR G++K +E +G
Sbjct: 187 NRSNTTLIFLNQIRMKIGVMFGSPETTTGGNALKFYASVRFDIRRIGQLKD--KEEVIGN 244
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P++Q EF+II+GEG+SK+G ++D ++V + GAWYSY QR+GQ
Sbjct: 245 QTRVKVVKNKLAPPFRQVEFDIIYGEGISKVGELIDLGVKANVVEKSGAWYSYDSQRIGQ 304
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
GR+ A Q+LRD+P + IE +R G+V ++ P+ EE
Sbjct: 305 GRENAKQFLRDHPEIANAIENRIRE--QSGTVQNAM----ITTPDAEE 346
>gi|227495813|ref|ZP_03926124.1| recombination protein A [Actinomyces urogenitalis DSM 15434]
gi|226834635|gb|EEH67018.1| recombination protein A [Actinomyces urogenitalis DSM 15434]
Length = 399
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/329 (56%), Positives = 250/329 (75%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL A++ I+ +FGKGSV RLG V P+G + LD+ALG GGLP+GRI+EI
Sbjct: 8 DRSKALATALSQIDKAFGKGSVMRLGDDTRPPVSVIPTGSIALDVALGVGGLPRGRIIEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y+KALGVD +NL+V QPD GE
Sbjct: 68 YGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDNLLVSQPDTGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG +D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 128 ALEIADMLIRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR+++R +I+++K GD+ VG R
Sbjct: 188 TGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRIDVR---RIQTLKDGDQPVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+K++ P+KQAEF+I++G+G+S+ G +LD IV + GAW++YG +LGQG
Sbjct: 245 TRAKVVKNKMAPPFKQAEFDIVYGQGISREGSLLDMGVENGIVRKSGAWFTYGTDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIE + + + G
Sbjct: 305 KENARTFLKDNPELADEIENKILAALGIG 333
>gi|365828072|ref|ZP_09369903.1| RecA [Actinomyces sp. oral taxon 849 str. F0330]
gi|365264254|gb|EHM94064.1| RecA [Actinomyces sp. oral taxon 849 str. F0330]
Length = 416
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 250/332 (75%), Gaps = 3/332 (0%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGR 144
S+ DR +AL A+ I+ +FGKGSV RLG + P+G + LD+ALG GGLP+GR
Sbjct: 5 SQTQDRSKALATALAQIDKNFGKGSVMRLGDDTRPPISVIPTGSVALDVALGVGGLPRGR 64
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
I+E++GPESSGKTT+ALHA+A Q+ GGNA +DAEHA DP Y+KALGVD++NL+V QPD
Sbjct: 65 IIEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPD 124
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GE ALEI D + RSG +D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 125 TGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITG 184
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
S G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL++R G +K GD+ V
Sbjct: 185 ALSSTGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDVRRIGGLKD--GDQPV 242
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G R RV+V K+K++ P+KQAEF+I++G+G+S+ G +LD +V + GAW++YG+ +L
Sbjct: 243 GNRTRVKVVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQL 302
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
GQG++ A +L+DNP L EIE+ + + + G
Sbjct: 303 GQGKENARNFLKDNPQLAAEIEEKILAALGIG 334
>gi|296282672|ref|ZP_06860670.1| recombinase A [Citromicrobium bathyomarinum JL354]
Length = 354
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/328 (57%), Positives = 249/328 (75%), Gaps = 3/328 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+ALDAA+ I+ +FGKGS +LGS VE+ +G L LD+ALG GGLPKGR++E
Sbjct: 16 VDRQKALDAALAQIDRAFGKGSAMKLGSKETMNVESISTGSLGLDIALGIGGLPKGRVIE 75
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTTLALH IAE QK GG A VDAEHA DP Y+K LGVD++ LIV QPD GE
Sbjct: 76 VYGPESSGKTTLALHVIAEAQKAGGTAAFVDAEHALDPVYAKKLGVDIDELIVSQPDTGE 135
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ +
Sbjct: 136 QALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSIN 195
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE +G
Sbjct: 196 RSKCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKD--RDEIIGNS 253
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++G+G+SK+G +LD +V + G+W+SY R+GQG
Sbjct: 254 TRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDLGVKAGVVEKSGSWFSYDSIRIGQG 313
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSD 415
R+ A +L++NP + +++E +R D
Sbjct: 314 RENAKTFLKENPEICDKLEAAIRGKTDD 341
>gi|293609243|ref|ZP_06691545.1| recA protein [Acinetobacter sp. SH024]
gi|375135062|ref|YP_004995712.1| recombinase A [Acinetobacter calcoaceticus PHEA-2]
gi|427423493|ref|ZP_18913645.1| RecA protein [Acinetobacter baumannii WC-136]
gi|292827695|gb|EFF86058.1| recA protein [Acinetobacter sp. SH024]
gi|325122507|gb|ADY82030.1| recombinase A [Acinetobacter calcoaceticus PHEA-2]
gi|425699726|gb|EKU69331.1| RecA protein [Acinetobacter baumannii WC-136]
Length = 348
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/335 (55%), Positives = 254/335 (75%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE +G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIIGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVH 419
+ +++ +NP + EIEK++R + ++G+V
Sbjct: 302 NNVIRHFEENPQMAGEIEKIIREQLLTTGTNGAVQ 336
>gi|313888267|ref|ZP_07821938.1| RecA protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845670|gb|EFR33060.1| RecA protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 353
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/322 (57%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q AL ++ I +G+GSV LG +E+ P+G L LD+ALG GG+PKGRI+EI
Sbjct: 9 EKQEALHNVISKIEKQYGEGSVMILGEDVKLDIESIPTGSLALDIALGIGGIPKGRIIEI 68
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH +AE QK+GG VDAEHA D Y+K LGVDVENLI+ QPD GE
Sbjct: 69 YGPESSGKTTLALHMLAEAQKIGGTGAFVDAEHALDAGYAKNLGVDVENLIISQPDTGEQ 128
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RS A+DLI +DSV+AL P+AEI+G++G QIGLQARLMSQALRK++G +K
Sbjct: 129 ALEITEALVRSNAVDLIIIDSVAALVPKAEIDGDMGAAQIGLQARLMSQALRKLTGAINK 188
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ CT++F+NQ+R K+G+ +GNPE T+GG ALKF++SVRL+IR + IK KGDE +G RV
Sbjct: 189 SKCTVVFINQLREKVGIMFGNPETTTGGRALKFYSSVRLDIRKSENIK--KGDEIIGNRV 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P++QAEF+I++G+G+S +G +LD A DI+ + GAWYSYG++RLGQGR
Sbjct: 247 RVKVVKNKIAPPFRQAEFDIMYGKGISSVGNILDVAAEADIIKKAGAWYSYGEERLGQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ + +L +NP L +EIE VR
Sbjct: 307 ENSKDFLEENPELLKEIEHKVR 328
>gi|154483622|ref|ZP_02026070.1| hypothetical protein EUBVEN_01326 [Eubacterium ventriosum ATCC
27560]
gi|149735532|gb|EDM51418.1| RecA protein [Eubacterium ventriosum ATCC 27560]
Length = 383
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/334 (55%), Positives = 258/334 (77%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ I GKGS+ +LG +G ++ VET P+G L+LDLALG GG+PKGR+VE
Sbjct: 43 DKLKALDAAIAQIERQHGKGSIMKLGDSGKSMNVETIPTGSLSLDLALGMGGIPKGRVVE 102
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAEVQK GG A +DAEHA DP Y+KA+GVD++NL + QPD GE
Sbjct: 103 IYGPESSGKTTVALHMIAEVQKRGGVAGFIDAEHALDPVYAKAIGVDIDNLYISQPDYGE 162
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D+I VDSV+AL P+AEI+GE+G +G ARLMSQALRK++G +
Sbjct: 163 QALEITETMVRSGAVDIIVVDSVAALVPKAEIDGEMGESHMGQHARLMSQALRKLTGIMN 222
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K GCT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVR+++R +K+ G E VG R
Sbjct: 223 KTGCTVIFINQLREKIGVMFGNPETTTGGRALKFYASVRMDVRRVETLKT--GGEMVGNR 280
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+K+AEF+I+FG+G+S+ G +LD A +V++ G+WY+Y ++++GQG
Sbjct: 281 ARVKVVKNKIAPPFKEAEFDIMFGKGISREGDILDLAANCGVVIKSGSWYAYNNEKIGQG 340
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMS-DGSVHQ 420
R+ A +Y +NP + EE+E+ VR + DG+ +
Sbjct: 341 RENAKKYFMENPAVMEEVEQKVRDFYNIDGTQQE 374
>gi|444921804|ref|ZP_21241634.1| Protein RecA [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507077|gb|ELV07259.1| Protein RecA [Wohlfahrtiimonas chitiniclastica SH04]
Length = 350
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 245/323 (75%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I+ FGKGSV R G + +G L LD+ALG GGLP+GRI+E
Sbjct: 4 NKRKALQAALGQIDKQFGKGSVMRFGDQTENTDIIPVSTGSLGLDIALGIGGLPRGRIIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LHAIAE QK GG A +DAEHA DP Y+ LGVDVENL + QPDNGE
Sbjct: 64 IYGPESSGKTTLTLHAIAEAQKAGGMAAFIDAEHALDPVYAAKLGVDVENLYISQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N
Sbjct: 124 QALEIADTLVRSGALDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 184 KSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIK--KGDEVIGAE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KVS P+KQ EF+I++GEG+S++G ++D A DI+ + G+WYSYGD+R+GQG
Sbjct: 242 TRVKVVKNKVSPPFKQTEFDIMYGEGISRVGEIIDLAVKADIIEKSGSWYSYGDKRIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
++ Q+L+DN + + IE VR
Sbjct: 302 KENVKQFLKDNADIAQTIENQVR 324
>gi|310287748|ref|YP_003939006.1| recombinase A [Bifidobacterium bifidum S17]
gi|311064634|ref|YP_003971359.1| recombinase A [Bifidobacterium bifidum PRL2010]
gi|390937162|ref|YP_006394721.1| recombinase A [Bifidobacterium bifidum BGN4]
gi|421736407|ref|ZP_16175219.1| recombinase A [Bifidobacterium bifidum IPLA 20015]
gi|309251684|gb|ADO53432.1| RecA protein [Bifidobacterium bifidum S17]
gi|310866953|gb|ADP36322.1| RecA protein [Bifidobacterium bifidum PRL2010]
gi|389890775|gb|AFL04842.1| recombinase A [Bifidobacterium bifidum BGN4]
gi|407296301|gb|EKF15871.1| recombinase A [Bifidobacterium bifidum IPLA 20015]
Length = 396
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/336 (57%), Positives = 251/336 (74%), Gaps = 6/336 (1%)
Query: 77 NGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLAL 136
NG D D R R+ ALD+A+ + SFGKGS RLG VE P+G L LDLAL
Sbjct: 26 NGPVGDGIDPR---RKAALDSALEQVEKSFGKGSAMRLGDKPEQNVEVIPTGSLALDLAL 82
Query: 137 G-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDV 195
G GGLPKGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD
Sbjct: 83 GIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDT 142
Query: 196 ENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLM 255
++LIV QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLM
Sbjct: 143 DSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLM 202
Query: 256 SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKI 315
SQALRKM+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR I
Sbjct: 203 SQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTI 262
Query: 316 KSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGA 375
K+ G+E VG R +V+V K+K++ P+K AEF++++GEG+SK G +LD A ++V + G+
Sbjct: 263 KN--GEEAVGNRTKVKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMALQCNVVKKSGS 320
Query: 376 WYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
W++Y +LGQGR+ ++L+DNP + EEI V++
Sbjct: 321 WFTYDGDQLGQGRENVRKFLKDNPQITEEIGNKVKA 356
>gi|389711178|ref|ZP_10186989.1| recombinase A [Acinetobacter sp. HA]
gi|388610030|gb|EIM39167.1| recombinase A [Acinetobacter sp. HA]
Length = 347
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/331 (56%), Positives = 255/331 (77%), Gaps = 4/331 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIAE QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+GV+ LG ++D A +IV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS-MMSDGSV 418
+ ++YL +N L + IEK++R +++ G+V
Sbjct: 302 NNTIRYLEENKALADTIEKLIREQLLTTGNV 332
>gi|421463945|ref|ZP_15912638.1| RecA protein [Acinetobacter radioresistens WC-A-157]
gi|421855941|ref|ZP_16288313.1| protein RecA [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
gi|400206319|gb|EJO37296.1| RecA protein [Acinetobacter radioresistens WC-A-157]
gi|403188624|dbj|GAB74514.1| protein RecA [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
Length = 348
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 251/325 (77%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE +G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIIGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+GV+ LG ++D A +I+ + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEALFQILYGKGVNHLGELIDLAVQQEIIQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++L +NP L E+E+++R +
Sbjct: 302 NNVIRHLEENPELAVEVERLIREQL 326
>gi|421733394|ref|ZP_16172500.1| recombinase A [Bifidobacterium bifidum LMG 13195]
gi|407078636|gb|EKE51436.1| recombinase A [Bifidobacterium bifidum LMG 13195]
Length = 396
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/336 (57%), Positives = 251/336 (74%), Gaps = 6/336 (1%)
Query: 77 NGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLAL 136
NG D D R R+ ALD+A+ + SFGKGS RLG VE P+G L LDLAL
Sbjct: 26 NGPVGDGIDPR---RKAALDSALEQVEKSFGKGSAMRLGDKPEQNVEVIPTGSLALDLAL 82
Query: 137 G-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDV 195
G GGLPKGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD
Sbjct: 83 GIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDT 142
Query: 196 ENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLM 255
++LIV QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLM
Sbjct: 143 DSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLM 202
Query: 256 SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKI 315
SQALRKM+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR I
Sbjct: 203 SQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTI 262
Query: 316 KSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGA 375
K+ G+E VG R +V+V K+K++ P+K AEF++++GEG+SK G +LD A ++V + G+
Sbjct: 263 KN--GEEAVGNRTKVKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMALQCNVVKKSGS 320
Query: 376 WYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
W++Y +LGQGR+ ++L+DNP + EEI V++
Sbjct: 321 WFTYDGDQLGQGRENVRKFLKDNPQITEEIGNKVKA 356
>gi|294650666|ref|ZP_06728020.1| recombination protein A [Acinetobacter haemolyticus ATCC 19194]
gi|292823457|gb|EFF82306.1| recombination protein A [Acinetobacter haemolyticus ATCC 19194]
Length = 347
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 248/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K +GDE G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EGDEITGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFKEAVFQIMYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++ +NP + +EIEK++R +
Sbjct: 302 NNVIRHFEENPQMAQEIEKLIREQL 326
>gi|226953077|ref|ZP_03823541.1| recombinase A [Acinetobacter sp. ATCC 27244]
gi|226836169|gb|EEH68552.1| recombinase A [Acinetobacter sp. ATCC 27244]
Length = 347
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 248/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K +GDE G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EGDEITGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFKEAVFQIMYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++ +NP + +EIEK++R +
Sbjct: 302 NNVIRHFEENPQMAQEIEKLIREQL 326
>gi|90420927|ref|ZP_01228832.1| RecA [Aurantimonas manganoxydans SI85-9A1]
gi|90334902|gb|EAS48674.1| RecA [Aurantimonas manganoxydans SI85-9A1]
Length = 357
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/324 (59%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
LD+ +ALDAA++ I +FGKGS+ RLG + +ET +G L LD+ALG GGLPKGR+V
Sbjct: 14 LDKNKALDAALSQIERAFGKGSIMRLGENEKIVEIETVSTGSLGLDIALGIGGLPKGRVV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
E++GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EVYGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G G+QARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE G
Sbjct: 194 SRSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKDR--DEVTGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ +V+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 252 QTKVKVVKNKLAPPFKQVEFDIMYGEGVSKTGELVDLGVKSGIVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LRDNP + +EIE ++R
Sbjct: 312 GRENAKSFLRDNPAVADEIETLIR 335
>gi|313140550|ref|ZP_07802743.1| protein recA [Bifidobacterium bifidum NCIMB 41171]
gi|313133060|gb|EFR50677.1| protein recA [Bifidobacterium bifidum NCIMB 41171]
Length = 396
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/336 (57%), Positives = 251/336 (74%), Gaps = 6/336 (1%)
Query: 77 NGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLAL 136
NG D D R R+ ALD+A+ + SFGKGS RLG VE P+G L LDLAL
Sbjct: 26 NGPVGDGIDPR---RKAALDSALEQVEKSFGKGSAMRLGDKPEQNVEVIPTGSLALDLAL 82
Query: 137 G-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDV 195
G GGLPKGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD
Sbjct: 83 GIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDT 142
Query: 196 ENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLM 255
++LIV QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLM
Sbjct: 143 DSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLM 202
Query: 256 SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKI 315
SQALRKM+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR I
Sbjct: 203 SQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTI 262
Query: 316 KSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGA 375
K+ G+E VG R +V+V K+K++ P+K AEF++++GEG+SK G +LD A ++V + G+
Sbjct: 263 KN--GEEAVGNRTKVKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMALQCNVVKKSGS 320
Query: 376 WYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
W++Y +LGQGR+ ++L+DNP + EEI V++
Sbjct: 321 WFTYDGDQLGQGRENVRKFLKDNPQITEEIGNKVKA 356
>gi|408500864|ref|YP_006864783.1| recA protein [Bifidobacterium asteroides PRL2011]
gi|408465688|gb|AFU71217.1| recA protein [Bifidobacterium asteroides PRL2011]
Length = 384
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/322 (59%), Positives = 247/322 (76%), Gaps = 5/322 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
RQ AL+ A+ + SFGKGS RLG VE P+G L LD+ALG GGLP+GRIVEI+
Sbjct: 22 RQAALNTALAQVEKSFGKGSAMRLGDKPAQDVEVIPTGSLALDMALGIGGLPRGRIVEIY 81
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA+A Q GG A +DAEHA DP Y+K LGVD ++LIV QPDNGE A
Sbjct: 82 GPESSGKTTLALHAVANAQAGGGVAAFIDAEHALDPEYAKKLGVDTDSLIVSQPDNGEQA 141
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRKM+G S+A
Sbjct: 142 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALSQA 201
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVRV 328
T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVRL+IR +I+++K GDE VG R
Sbjct: 202 NTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRLDIR---RIQTLKNGDEAVGNRT 258
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K AEF+I++GEG+SK G +LD A +IV + G+W++Y +LGQGR
Sbjct: 259 KVKVVKNKMAPPFKVAEFDILYGEGISKEGSVLDMALQTNIVKKSGSWFTYEGDQLGQGR 318
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ Q+L+DNP L +EIE V+
Sbjct: 319 ENVRQFLKDNPGLTKEIEDKVK 340
>gi|381210057|ref|ZP_09917128.1| recombinase A [Lentibacillus sp. Grbi]
Length = 349
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 248/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+++ALD A+ I FGKGS+ +LG G V T PSG L LD+ALG GG P+GR+VEI
Sbjct: 3 DKKQALDMALKQIEKQFGKGSIMKLGEQEGQKVATIPSGSLALDVALGIGGYPRGRVVEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE Q+ GG A +DAEHA DP+Y++ALGVD+E L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEAQQQGGQAAFIDAEHALDPTYARALGVDIEELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T +F+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K +G++ VG +
Sbjct: 183 SKTTAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNDMVGNKA 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++GEG+SK G +LD A +DI+ + GAWYSY +RLGQGR
Sbjct: 241 RLKVVKNKVAPPFKQAEVDIMYGEGISKEGEILDIASDLDIIQKSGAWYSYNGERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++N ++ EI +R
Sbjct: 301 ENAKQFLKENQNIKLEIHHAIR 322
>gi|423348923|ref|ZP_17326579.1| protein recA [Scardovia wiggsiae F0424]
gi|393703152|gb|EJD65353.1| protein recA [Scardovia wiggsiae F0424]
Length = 369
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/333 (56%), Positives = 253/333 (75%), Gaps = 5/333 (1%)
Query: 80 SSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-G 138
+ D+ +++ RQ ALD A+ + +FGKGS RLG VE P+G + LDLALG G
Sbjct: 4 TKDTANAQDARRQAALDTALAQVEKAFGKGSAMRLGDKPVNQVEVIPTGSIALDLALGIG 63
Query: 139 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENL 198
GLP+GRI+EIFGPESSGKTT+ALHA+A QK GG A +DAEHA DP Y++ LGVD ++L
Sbjct: 64 GLPRGRIIEIFGPESSGKTTIALHAVANAQKNGGVAAFIDAEHALDPDYARKLGVDTDSL 123
Query: 199 IVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 258
I+ QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+GE+G +GLQARLMSQA
Sbjct: 124 IISQPDNGEQALEIADMLIRSGALDIIVVDSVAALVPKAEIDGEMGDSHVGLQARLMSQA 183
Query: 259 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318
LRKM+G S++ T IF+NQ+R KIGV +GNPE T+GG ALKF++SVRL+IR +I+++
Sbjct: 184 LRKMTGALSQSNTTAIFINQLREKIGVMFGNPETTTGGKALKFYSSVRLDIR---RIQTL 240
Query: 319 K-GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
K GDE VG R R++V K+K++ P+K AEF+I++GEGVS+ G ++D A IV + G+W+
Sbjct: 241 KNGDEAVGNRTRIKVVKNKMAPPFKSAEFDILYGEGVSREGSLIDMALSAGIVKKSGSWF 300
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
+Y +LGQGR+K Q+L+DNP L +EIE V+
Sbjct: 301 TYEGDQLGQGREKVRQFLKDNPELADEIEGKVK 333
>gi|417962082|ref|ZP_12604362.1| Protein recA, partial [Candidatus Arthromitus sp. SFB-2]
gi|380331197|gb|EIA22281.1| Protein recA, partial [Candidatus Arthromitus sp. SFB-2]
Length = 324
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
LD+ +A++ AM+ I +GKGS+ +LG +E+ +GCL LD+ALG GGLPKGRI+E
Sbjct: 4 LDKMKAIEMAMSQIEKQYGKGSIMKLGEQSALNIESVSTGCLDLDIALGIGGLPKGRIIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH IAE QK GG A +DAEHA DPSY+K LGVD ENLI+ QPDNGE
Sbjct: 64 VYGPESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +
Sbjct: 124 QALEIAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGHIN 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C IF+NQ+R K+GV +GNPE T GG ALKF+ASVRL++R IK +GDE VG R
Sbjct: 184 KSKCVAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRRIDSIK--QGDEIVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P++ +EF+II+ G+SK G +LD A +I+ + G+W+SY +++LGQG
Sbjct: 242 TRVKIMKNKVAPPFRISEFDIIYNRGISKEGSLLDLAVKENIIQKSGSWFSYKNEKLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
R+ A Q+L +N + +EIE+++
Sbjct: 302 RENAKQFLLENKSILQEIERLI 323
>gi|429765501|ref|ZP_19297792.1| RecA protein [Clostridium celatum DSM 1785]
gi|429186204|gb|EKY27157.1| RecA protein [Clostridium celatum DSM 1785]
Length = 355
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 246/323 (76%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+++ +A++ AM+ I FGKGS+ +LG +++ +GCL LD+ALG GG+P+GRI+E
Sbjct: 15 VNKLKAIENAMSQIEKQFGKGSIMKLGEHSTLNIDSISTGCLDLDIALGIGGVPRGRIIE 74
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH AE QKLGG VDAEHA DPSY++ LGVD ENLIV QPD GE
Sbjct: 75 IYGPESSGKTTVALHIAAEAQKLGGAVAFVDAEHALDPSYARNLGVDTENLIVSQPDTGE 134
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
LEIA+ + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 135 QGLEIAEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTIN 194
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF++S+RL++R IK + DE VG R
Sbjct: 195 KSKCVVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRLDVRRIDSIK--QADEIVGNR 252
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++ EG+S+ G ++D +IV + GAW+SY D RLGQG
Sbjct: 253 TRVKVMKNKVAPPFKQAEFDIMYNEGISRTGNIVDVGVKENIVQKSGAWFSYNDIRLGQG 312
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A QYL+DNP + EIE +R
Sbjct: 313 RENAKQYLKDNPEIALEIENKIR 335
>gi|407782762|ref|ZP_11129971.1| recombinase A [Oceanibaculum indicum P24]
gi|407205058|gb|EKE75035.1| recombinase A [Oceanibaculum indicum P24]
Length = 360
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/325 (57%), Positives = 252/325 (77%), Gaps = 4/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+Q+ALDAA+ I +FGKGS+ +LG A+ +E +G L LD+ALG GGLP+GRI+
Sbjct: 14 MDKQKALDAALGQIERAFGKGSIMKLGQRDSAVEIEAISTGSLGLDIALGIGGLPRGRII 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHA+AE QK+GG VDAEHA DP+Y++ LGV+V+ L++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHAVAEAQKVGGTCAFVDAEHALDPTYARKLGVNVDELLISQPDAG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G +GLQARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK DE VG
Sbjct: 194 SKSRCMVIFINQIRMKIGVMFGNPETTTGGHALKFYASVRLDIRRIGAIKD--KDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+KV+ P++ EF+I++GEGVSK+G ++D +IV + GAW+SY QR+GQ
Sbjct: 252 QTRVKVVKNKVAPPFRVVEFDIMYGEGVSKMGELVDLGVKANIVEKSGAWFSYNGQRIGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A +LR+N + +EIE+ +R+
Sbjct: 312 GRENAKNFLRENTAMAQEIEQKIRA 336
>gi|304316844|ref|YP_003851989.1| recA protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433654987|ref|YP_007298695.1| protein RecA [Thermoanaerobacterium thermosaccharolyticum M0795]
gi|302778346|gb|ADL68905.1| recA protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433293176|gb|AGB18998.1| protein RecA [Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 343
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 248/324 (76%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+ALD A++ I FGKGS+ RLG VE +G + LD+ALG GG+P+GRI+
Sbjct: 1 MIEKQKALDMAISQIERQFGKGSIMRLGDNSKLNVEVISTGSIDLDIALGVGGVPRGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTT+ALH +AE QKLGG +DAEHA DP+Y+K +GV+++NL+V QPD G
Sbjct: 61 EIFGPESSGKTTIALHILAEAQKLGGTGAFIDAEHALDPAYAKNVGVNIDNLLVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGAID+I +DSV+AL P+AEI+G++G +GLQARLMSQALRK+SG
Sbjct: 121 EQALEIVEALVRSGAIDVIVIDSVAALVPKAEIDGDMGDAHVGLQARLMSQALRKLSGII 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK +F+NQ+R K+GV +GNPE T GG ALKF++++RL++R IK +G++ VG
Sbjct: 181 SKTKSVAVFINQLREKVGVMFGNPETTPGGRALKFYSTIRLDVRKVDAIK--QGNDVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P+KQAEF+I++GEG+S+ G +LD A +DI+ + GAWYSYGD RLGQ
Sbjct: 239 RTRVKVVKNKVAPPFKQAEFDIMYGEGISREGSILDLAASIDIIDKSGAWYSYGDIRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DN + +EIE +R
Sbjct: 299 GRENAKQYLKDNKSIADEIENKIR 322
>gi|150390420|ref|YP_001320469.1| recA protein [Alkaliphilus metalliredigens QYMF]
gi|149950282|gb|ABR48810.1| recA protein [Alkaliphilus metalliredigens QYMF]
Length = 347
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 252/323 (78%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+++++ALD A++ I FGKGS+ +LG +E +G + LD+A+G GG+P+GR+VE
Sbjct: 1 MEKKKALDVAISQIEKQFGKGSIMKLGEDSKLSLECISTGSIDLDVAIGIGGVPRGRVVE 60
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT++LH IAE QK GG+A +DAEHA DP Y++ LGVD ENLIV QPD GE
Sbjct: 61 IYGPESSGKTTVSLHIIAEAQKNGGSAAFIDAEHALDPIYARKLGVDTENLIVSQPDTGE 120
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG+ +
Sbjct: 121 QALEIAEALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGSIN 180
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL++R IK +G++ +G R
Sbjct: 181 KSNTTAIFINQLREKIGVMFGNPETTTGGRALKFYASVRLDVRRIDVIK--QGNDIIGNR 238
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++GEG+SK G +LD A ++I+ + GAWYSYGD RLGQG
Sbjct: 239 TRVKVVKNKIAPPFKQAEFDIMYGEGISKTGDVLDVASNLEIIKKAGAWYSYGDHRLGQG 298
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + Q+L++NP + E+E +R
Sbjct: 299 RENSKQFLKENPDIFLEVENKIR 321
>gi|312115731|ref|YP_004013327.1| recA protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220860|gb|ADP72228.1| recA protein [Rhodomicrobium vannielii ATCC 17100]
Length = 378
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/335 (58%), Positives = 255/335 (76%), Gaps = 4/335 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG 137
F G+ +D+Q+AL+AA++ I +FGKGSV RLG + VE +G L LD+ALG
Sbjct: 6 FRVIEGNWDSMDKQKALEAALSQIERNFGKGSVMRLGKNDKLVEVEAISTGSLGLDIALG 65
Query: 138 -GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVE 196
GGLP+GR+VEIFGPESSGKTTLALH IAE QK GG+ VDAEHA DP Y++ LGV++E
Sbjct: 66 IGGLPRGRVVEIFGPESSGKTTLALHVIAEAQKKGGSCGFVDAEHALDPGYARKLGVNLE 125
Query: 197 NLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMS 256
LI+ QPD GE ALEI D + RSGAID+I VDSV+ALTP+AEIEGE+G G+QARLMS
Sbjct: 126 ELIISQPDAGEQALEITDTLVRSGAIDVIVVDSVAALTPKAEIEGEMGDVLPGMQARLMS 185
Query: 257 QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIK 316
QALRK++G+ SK+ C +IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR G+IK
Sbjct: 186 QALRKLTGSISKSNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGQIK 245
Query: 317 SVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAW 376
+ DE VG + RV+V K+KV+ P+KQ EF+I++GEG+SK G ++D +IV + G+W
Sbjct: 246 --ERDEVVGNQTRVKVVKNKVAPPFKQVEFDIMYGEGISKTGELVDLGVKANIVEKSGSW 303
Query: 377 YSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
YS+ QR+GQGR+ A +LR NPL+ E IE+ +R+
Sbjct: 304 YSHDSQRIGQGRENAKAFLRGNPLVAEAIEREIRA 338
>gi|332185210|ref|ZP_08386959.1| protein RecA [Sphingomonas sp. S17]
gi|332014934|gb|EGI56990.1| protein RecA [Sphingomonas sp. S17]
Length = 346
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/323 (57%), Positives = 246/323 (76%), Gaps = 5/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALDAA+ I+ +FGKGS +LG VE +G L LD+ALG GGLP+GR++E+
Sbjct: 7 DRQKALDAALAQIDRAFGKGSAMKLGQKETMQVEAISTGSLGLDIALGVGGLPRGRVIEV 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH IAE QK+GG A VDAEHA DP Y+K LGV+++ LIV QPD GE
Sbjct: 67 YGPESSGKTTLALHVIAEAQKMGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ S+
Sbjct: 127 ALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISR 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV-GVR 327
+ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK ED+ G
Sbjct: 187 SRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKD---REDITGNT 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + G+W+SY R+GQG
Sbjct: 244 TRVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSGSWFSYDSVRIGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A YLR+NP + + +E+ +R
Sbjct: 304 RENAKNYLRENPDMADRLERAIR 326
>gi|149184397|ref|ZP_01862715.1| recombinase A [Erythrobacter sp. SD-21]
gi|148831717|gb|EDL50150.1| recombinase A [Erythrobacter sp. SD-21]
Length = 341
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/322 (58%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALDAA+ I+ +FGKGS +LG VE +G L LD+ALG GGLPKGR++E+
Sbjct: 4 DRQKALDAALAQIDRAFGKGSAMKLGQKEAMNVEAISTGSLGLDIALGIGGLPKGRVIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGVDV+ LIV QPD GE
Sbjct: 64 YGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVDVDELIVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ ++
Sbjct: 124 ALEITDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSINR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE +G
Sbjct: 184 SKCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR--DEVIGNST 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + G+W+SY R+GQGR
Sbjct: 242 RVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGVVEKSGSWFSYDSVRIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A +L++NP + ++E +R
Sbjct: 302 ENAKTFLKENPEMCAKLEAAIR 323
>gi|395786463|ref|ZP_10466190.1| protein recA [Bartonella tamiae Th239]
gi|423716644|ref|ZP_17690834.1| protein recA [Bartonella tamiae Th307]
gi|395422761|gb|EJF88957.1| protein recA [Bartonella tamiae Th239]
gi|395428718|gb|EJF94793.1| protein recA [Bartonella tamiae Th307]
Length = 360
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/328 (58%), Positives = 250/328 (76%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPK
Sbjct: 10 EDKTVDKSKALDAALSQIERSFGKGSIMRLGQNEQVVEIETIPTGSLSLDIALGVGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLALH IAE QK GG +DAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKRGGICAFIDAEHALDPVYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + +++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE
Sbjct: 190 TASIARSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKD--RDE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSKLG ++D +V + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKLGELIDLGVKAGVVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A Q+LR N + +EIE +R
Sbjct: 308 RLGQGRENAKQFLRANKEVADEIETTLR 335
>gi|210622626|ref|ZP_03293286.1| hypothetical protein CLOHIR_01234 [Clostridium hiranonis DSM 13275]
gi|210154127|gb|EEA85133.1| hypothetical protein CLOHIR_01234 [Clostridium hiranonis DSM 13275]
Length = 361
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/348 (54%), Positives = 257/348 (73%), Gaps = 4/348 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+ A+ I FGKGSV RLG A ++T +G + LD+A+G GGLPKGRIVEI
Sbjct: 6 EKLKALNEALGKIEKDFGKGSVMRLGEATSLEIDTISTGSIGLDIAIGIGGLPKGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QK GG A +DAEHA DP Y+KALGVDVENLI+ QPD GE
Sbjct: 66 YGPESSGKTTVALHCVAEAQKDGGIAAFIDAEHALDPVYAKALGVDVENLIISQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I VDSV+AL P+AEIEG++G +GLQARLMSQALRK++G+ K
Sbjct: 126 ALEIAEALIRSGAIDIIVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGSIKK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T+GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 186 SNCVAIFINQLREKVGIMFGNPETTTGGRALKFYSSVRLDVRKIDTIK--QGDKVLGSRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++G+G+SK+G +LD A +D+V + G+WY+Y D +LGQGR
Sbjct: 244 RVKVVKNKVAPPFKQAEFDIMYGQGISKIGDLLDIAADIDVVKKSGSWYNYQDVKLGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS-DGSVHQGSFLRNVSLPNQEEN 435
+ ++L DN L EIE VR DG+ + + V +++
Sbjct: 304 ENVKKFLEDNMDLTNEIEAKVRHYYHLDGTSPEDDVVEEVKADTKKDT 351
>gi|418054896|ref|ZP_12692951.1| Protein recA [Hyphomicrobium denitrificans 1NES1]
gi|353210478|gb|EHB75879.1| Protein recA [Hyphomicrobium denitrificans 1NES1]
Length = 377
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 249/324 (76%), Gaps = 3/324 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+++AL+ A+ I+ +FGKGS+ RLG+ +E P+G L LD+ALG GGLPKGRI+E
Sbjct: 14 MDKKQALEHALQQIDKNFGKGSIMRLGANEKVDIEAIPTGSLGLDIALGIGGLPKGRIIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH +AE QK GG VDAEHA DP Y+K LGV VE+L++ QPD GE
Sbjct: 74 IYGPESSGKTTLALHVVAEAQKRGGICAFVDAEHAIDPGYAKKLGVKVEDLLISQPDTGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+ALTP+AE+EGE+G GLQARLMSQALRK++G+ S
Sbjct: 134 QALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTGSIS 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQIR KIG+ +GNPE T+GG ALKF+ASVRL+IR G+IK + +E VG +
Sbjct: 194 KSKCMVIFINQIRMKIGIMFGNPETTTGGNALKFYASVRLDIRRIGQIK--EREETVGNQ 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEGVSK+G ++D IV + GAW SY R+GQG
Sbjct: 252 TRVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELIDIGVKAGIVEKSGAWLSYNGDRIGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL++NP + EIE +R+
Sbjct: 312 RENAKTYLKENPRIANEIENAIRA 335
>gi|402825157|ref|ZP_10874470.1| recombinase A [Sphingomonas sp. LH128]
gi|402261292|gb|EJU11342.1| recombinase A [Sphingomonas sp. LH128]
Length = 356
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 246/324 (75%), Gaps = 3/324 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+AL+AA+ I+ +FGKGS +LGS VE +G L LD+ALG GGLP+GR++E
Sbjct: 17 MDRQKALEAALAQIDKAFGKGSAMKLGSKETMQVEAISTGSLGLDIALGVGGLPRGRVIE 76
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH IAE QK GG A +DAEHA DP Y+K LGV+++ LIV QPD GE
Sbjct: 77 IYGPESSGKTTLALHCIAEAQKTGGTAAFIDAEHALDPVYAKKLGVNIDELIVSQPDTGE 136
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ S
Sbjct: 137 QALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSIS 196
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG IK DE VG
Sbjct: 197 RSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGAIKDR--DEVVGNA 254
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P+KQ EF+I++GEGVSK+G +LD +V + GAW+SY R+GQG
Sbjct: 255 TRVKIVKNKVAPPFKQVEFDIMYGEGVSKIGEILDLGVKAGLVEKSGAWFSYDSIRIGQG 314
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL+ NP + + +EK +R+
Sbjct: 315 RENAKTYLKTNPEVCDRLEKAIRT 338
>gi|406038827|ref|ZP_11046182.1| recombinase A [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 348
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 250/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+G ++LG ++D A +IV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEALFQILYGKGTNQLGEVVDLAVQQEIVQKAGAWYSYLGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ ++Y +NP + +EIEK +R +
Sbjct: 302 NNVIRYFEENPAIAQEIEKQIRDQL 326
>gi|50084563|ref|YP_046073.1| recombinase A [Acinetobacter sp. ADP1]
gi|1172879|sp|P42438.1|RECA_ACIAD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|440089|gb|AAC27115.1| RecA [Acinetobacter sp. ADP1]
gi|49530539|emb|CAG68251.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter sp. ADP1]
Length = 349
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 250/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE +G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIIGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+++A F+I++G+GV++LG ++D A +IV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFREAIFQILYGKGVNQLGELVDLAVQQNIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ ++YL +NP + EIE V+R +
Sbjct: 302 NNVIRYLEENPQISTEIEAVIREQL 326
>gi|340360394|ref|ZP_08682864.1| recombination protein A [Actinomyces sp. oral taxon 448 str. F0400]
gi|339883595|gb|EGQ73438.1| recombination protein A [Actinomyces sp. oral taxon 448 str. F0400]
Length = 400
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/328 (56%), Positives = 245/328 (74%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL A++ I+ SFGKGSV RLG V P+G LD+ALG GGLP+GR+VEI
Sbjct: 9 DRSKALATALSQIDKSFGKGSVMRLGDDTRPPVAVIPTGSTALDVALGIGGLPRGRVVEI 68
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y+KALGVD +NL+V QPD GE
Sbjct: 69 YGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDNLLVSQPDTGEQ 128
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSG +D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 129 ALEITDMLIRSGGLDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 188
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR+++R T +K GD+ VG R
Sbjct: 189 TGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRIDVRRTQTLKD--GDQPVGNRT 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+ +V K+K++ P+KQAEF+I++G+G+S+ G +LD +V + GAWY+YG +LGQG+
Sbjct: 247 KAKVVKNKMAPPFKQAEFDILYGQGISREGGLLDLGVEGGVVRKSGAWYTYGSDQLGQGK 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ A +L+DNP L +EIE + + + G
Sbjct: 307 ENARTFLKDNPELADEIENKILAALGIG 334
>gi|440780959|ref|ZP_20959430.1| recombinase A [Clostridium pasteurianum DSM 525]
gi|440221547|gb|ELP60752.1| recombinase A [Clostridium pasteurianum DSM 525]
Length = 353
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/319 (57%), Positives = 247/319 (77%), Gaps = 3/319 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL+AA+ I FGKGS+ +LG +++ +GCL+LD+ALG GG+P+GRI+EI+GP
Sbjct: 7 KALEAALGQIEKQFGKGSIMKLGEHSVLDIDSISTGCLSLDIALGIGGVPRGRIIEIYGP 66
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTT+ALH IAE QK+ G A +DAEHA DP+Y++ LGVD ENLIV QPD GE ALE
Sbjct: 67 ESSGKTTVALHVIAEAQKMEGTAAFIDAEHALDPAYARRLGVDTENLIVSQPDTGEQALE 126
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IA+ + RS AID+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G +K+ C
Sbjct: 127 IAEALVRSNAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGAINKSKC 186
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
+IF+NQ+R K+G+ +GNPE T GG ALKF+ASVR++IR IK +GDE +G R RV+
Sbjct: 187 VVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIK--QGDEIIGNRTRVK 244
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+K++ P+KQAEF+I++ EG+SK G ++D +I+ + GAW+SYGD RLGQGR+ A
Sbjct: 245 VIKNKIAPPFKQAEFDIMYNEGISKEGNIVDVGVKEEIIQKSGAWFSYGDIRLGQGRENA 304
Query: 392 LQYLRDNPLLQEEIEKVVR 410
QYL++NP ++ EIE +R
Sbjct: 305 KQYLKENPDIKLEIETKIR 323
>gi|406967497|gb|EKD92563.1| hypothetical protein ACD_28C00403G0006 [uncultured bacterium]
Length = 335
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/326 (57%), Positives = 247/326 (75%), Gaps = 2/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++A++ A++ I SFGKGS+ RLG + VET +G L+LDLALGGG+PKGRIVEI+
Sbjct: 5 DKKKAIELALSQIEKSFGKGSIMRLGESKSIQVETISTGSLSLDLALGGGIPKGRIVEIY 64
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH IAEVQK G A +DAEHA DP Y+K +GVDV+NL++ QPDNGE A
Sbjct: 65 GPESSGKTTLALHVIAEVQKNKGYAAFIDAEHALDPDYAKKIGVDVDNLLISQPDNGEQA 124
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI + + RS A+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ SK+
Sbjct: 125 LEITETLVRSNAVDVIVIDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLTAAISKS 184
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIK--SVKGDEDVGVR 327
T+IF+NQIR+KIGV YGNPE T GG ALKF++SVR++IR GKI+ + G E +G R
Sbjct: 185 KVTVIFINQIRFKIGVMYGNPETTPGGNALKFYSSVRMDIRRIGKIEGSAENGKEMMGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
V+V V K+K++ P+K AEF+I++ +G+S G +LD A + V R GA+Y+YG+ +LGQG
Sbjct: 245 VKVNVVKNKIAPPFKVAEFDIMYAKGISYSGDLLDIATEYEFVHRSGAFYNYGELKLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
R+ A +L NP + +EI K + M
Sbjct: 305 RENAKSFLEQNPKVMQEIAKSITQKM 330
>gi|392531922|ref|ZP_10279059.1| recombinase A [Carnobacterium maltaromaticum ATCC 35586]
Length = 384
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I +FGKGSV +LG V T PSG L LDLALG GG PKGRI+E+
Sbjct: 4 DRKQALDAALKKIEKNFGKGSVMKLGEKIDTQVLTIPSGSLALDLALGVGGYPKGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHA+AEVQK GG A +DAEHA DP Y+ ALGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVSLHAVAEVQKQGGIAAFIDAEHALDPKYAAALGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + SGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 ALEIADALVSSGAIDIVVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPEVT GG ALKF+A+VRLE+R +IK+ G + VG R
Sbjct: 184 TKTIALFINQIREKVGVMFGNPEVTPGGRALKFYATVRLEVRRAEQIKN--GTDVVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+S++G +LD DIV + GAWYSY +R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGEGISQVGELLDMGSEKDIVNKSGAWYSYEGERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A +Y +NP L+ EIE+ VR+
Sbjct: 302 ENAKKYFMENPELRVEIEQKVRA 324
>gi|339018114|ref|ZP_08644256.1| DNA recombinase RecA [Acetobacter tropicalis NBRC 101654]
gi|338752779|dbj|GAA07560.1| DNA recombinase RecA [Acetobacter tropicalis NBRC 101654]
Length = 340
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/348 (54%), Positives = 254/348 (72%), Gaps = 11/348 (3%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A+ I +FGKGSV RLG + P+G L LD+ALG GGLP+GR++E
Sbjct: 1 MDKAKALEGALGQIERAFGKGSVMRLGQRPREQADVIPTGSLGLDIALGIGGLPRGRVIE 60
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y+K LGVDV+NL++ QPD GE
Sbjct: 61 IYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYAKKLGVDVDNLLISQPDAGE 120
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G+ S
Sbjct: 121 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVS 180
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IFLNQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK DE VG +
Sbjct: 181 RSNTMMIFLNQIRLKIGVMFGNPETTTGGNALKFYASVRLDIRRVGSIKD--KDEVVGNQ 238
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D +V + GAW+SY QR+GQG
Sbjct: 239 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGAWFSYDSQRIGQG 298
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRN-VSLPNQEE 434
R+ + Q+LRD+P + +IE+ VR H G ++ P QEE
Sbjct: 299 RENSKQFLRDHPEMAADIERKVRE-------HAGVVAEAMMTAPEQEE 339
>gi|357975507|ref|ZP_09139478.1| recombinase A [Sphingomonas sp. KC8]
Length = 357
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+AL+AA+ I+ +FGKGS +LGS +E+ +G L LD+ALG GGLP+GRIVE
Sbjct: 17 MDRQKALEAALAQIDRAFGKGSAMKLGSREKIEIESISTGSLGLDIALGIGGLPRGRIVE 76
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
+FGPESSGKTTLALH IAE QK GG A VDAEHA DP Y++ LGVD++ LIV QPD GE
Sbjct: 77 VFGPESSGKTTLALHVIAEAQKAGGTAAFVDAEHALDPVYARKLGVDIDELIVSQPDTGE 136
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS AID++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ S
Sbjct: 137 QALEITDTLIRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGSIS 196
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK D+ VG
Sbjct: 197 RSRTLVIFINQIRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR--DDIVGNA 254
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + GAW+SY R+GQG
Sbjct: 255 TRVKVVKNKVAPPFKQVEFDIMYGEGISKVGEILDLGVKAGVVEKSGAWFSYDSIRIGQG 314
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + YLR NP + + +E +R
Sbjct: 315 RENSKTYLRQNPDVAQRLENAIR 337
>gi|410584495|ref|ZP_11321598.1| protein RecA [Thermaerobacter subterraneus DSM 13965]
gi|410504430|gb|EKP93941.1| protein RecA [Thermaerobacter subterraneus DSM 13965]
Length = 340
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/337 (54%), Positives = 254/337 (75%), Gaps = 4/337 (1%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRI 145
++R+RAL+ A+N I FGKGS+ R+G A L VE P+G L LD+ALG GG+P+GRI
Sbjct: 1 MIERERALEMALNQIEKQFGKGSIMRMGEASARLNVEVIPTGSLALDIALGVGGMPRGRI 60
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
+EIFGPE+SGKTT+ALH +A Q+ GG A +DAEHA DP Y++ LGVD+ NL++ QPD
Sbjct: 61 IEIFGPEASGKTTVALHVVASAQRSGGVAAFIDAEHALDPVYAENLGVDINNLLISQPDT 120
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIA+ + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
+K+ LIF+NQIR K+GV +GNPEVT GG ALKF+ASVRL++R +K +G E +G
Sbjct: 181 IAKSRTCLIFINQIREKVGVMFGNPEVTPGGRALKFYASVRLDVRRVETLK--QGGEMIG 238
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
+R R +V K+KV+ P++QAEF++++G+G+S+ G +LD A I+ + GAWYSYGD R+G
Sbjct: 239 IRARAKVVKNKVAPPFRQAEFDLLYGKGISREGDLLDIATQHGIIEKAGAWYSYGDTRIG 298
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
QGR+ A +YL +P + + IE+ +R ++S G + +
Sbjct: 299 QGRENAREYLVQHPEVADAIERRLRELLSLGGIRAAT 335
>gi|229817437|ref|ZP_04447719.1| hypothetical protein BIFANG_02699 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785226|gb|EEP21340.1| hypothetical protein BIFANG_02699 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 395
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/321 (57%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVE++
Sbjct: 18 RKAALDTALAQVEKSFGKGSAMRLGDRPEQNVEVIPTGSLALDMALGIGGLPKGRIVEVY 77
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++LIV QPDNGE A
Sbjct: 78 GPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQA 137
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRKM+G ++A
Sbjct: 138 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALAQA 197
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++G+PE T+GG ALKF++SVRL+IR IK+ GDE VG R R
Sbjct: 198 GTTAIFINQLREKIGVFFGSPETTTGGKALKFYSSVRLDIRRIQTIKN--GDEAVGNRTR 255
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+S+ G LD A + +V + G+W++Y +LGQGR+
Sbjct: 256 VKVVKNKMAPPFKSAEFDMLYGEGISREGSALDMAIQVGVVKKSGSWFTYEGDQLGQGRE 315
Query: 390 KALQYLRDNPLLQEEIEKVVR 410
+L+DNP + EEIE V+
Sbjct: 316 NVRNFLKDNPAITEEIENKVK 336
>gi|168207517|ref|ZP_02633522.1| recA protein [Clostridium perfringens E str. JGS1987]
gi|169342683|ref|ZP_02863724.1| recA protein [Clostridium perfringens C str. JGS1495]
gi|169299189|gb|EDS81259.1| recA protein [Clostridium perfringens C str. JGS1495]
gi|170661136|gb|EDT13819.1| recA protein [Clostridium perfringens E str. JGS1987]
Length = 352
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +A++ AM I FGKGSV +LG G ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 DKLKAIEMAMGQIEKQFGKGSVMKLGEQGSPQMDAVSTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QKLGG A +DAEHA DP Y+K LGV++++L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 127 ALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+G+ +GNPE T GG ALKF+ASVR++IR IK +GD G R
Sbjct: 187 SNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIK--QGDGITGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQAEF+I++ EG+SK G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A QYL++NP + +IE +R S
Sbjct: 305 ENAKQYLKENPAVALDIENQIREKYS 330
>gi|406036320|ref|ZP_11043684.1| recombinase A [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 348
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 259/347 (74%), Gaps = 3/347 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKNKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+++A F+I++G+G ++LG ++D A +IV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFREAVFQIMYGKGTNQLGELVDLAVQQEIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ +++ +NP + +EIEK++R + + ++ + + P+ EN
Sbjct: 302 NNVIRHFEENPQMAQEIEKLIREQLLTKNNNEAAQTEDAEEPDLLEN 348
>gi|339055914|ref|ZP_08648510.1| RecA protein [gamma proteobacterium IMCC2047]
gi|330720883|gb|EGG99071.1| RecA protein [gamma proteobacterium IMCC2047]
Length = 343
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/325 (57%), Positives = 246/325 (75%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++QRALD A++ I+ FGKGSV R+G V +G L LD+ALG GGLPKGRI+EI
Sbjct: 4 NKQRALDMALSQIDKQFGKGSVMRMGDQERPNVPAISTGSLGLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L AIAE QK GG A +DAEHA DP Y++ +GVDV+NL+V QPD GE
Sbjct: 64 YGPESSGKTTLTLQAIAEAQKAGGTAAFIDAEHALDPDYAQKIGVDVDNLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+ALTP+AEIEG++G +GLQARLMSQALRKM+GN +
Sbjct: 124 ALEIADALVRSGAVDILVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKMTGNVKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--EGDEVVGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQ EF+I++G+G+ ++G ++D +V + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFKQTEFQIMYGKGIFRMGELIDLGVKQGLVGKAGAWYSYQGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
A Q+L DNP + EEIE +R+ +
Sbjct: 302 ANAAQFLNDNPTVAEEIEGQIRAAL 326
>gi|110801858|ref|YP_698960.1| recombinase A [Clostridium perfringens SM101]
gi|123047323|sp|Q0SSE7.1|RECA_CLOPS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|110682359|gb|ABG85729.1| recA protein [Clostridium perfringens SM101]
Length = 352
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +A++ AM I FGKGSV +LG G ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 DKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QKLGG A +DAEHA DP Y+K LGV++++L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 127 ALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+G+ +GNPE T GG ALKF+ASVR++IR IK +GD G R
Sbjct: 187 SNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIK--QGDGITGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQAEF+I++ EG+SK G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A QYL++NP + +IE +R S
Sbjct: 305 ENAKQYLKENPSVALDIENQIREKYS 330
>gi|168216960|ref|ZP_02642585.1| recA protein [Clostridium perfringens NCTC 8239]
gi|182380878|gb|EDT78357.1| recA protein [Clostridium perfringens NCTC 8239]
Length = 352
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +A++ AM I FGKGSV +LG G ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 DKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QKLGG A +DAEHA DP Y+K LGV++++L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 127 ALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+G+ +GNPE T GG ALKF+ASVR++IR IK +GD G R
Sbjct: 187 SNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIK--QGDGITGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQAEF+I++ EG+SK G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A QYL++NP + +IE +R S
Sbjct: 305 ENAKQYLKENPAVALDIENQIREKYS 330
>gi|408356798|ref|YP_006845329.1| protein RecA [Amphibacillus xylanus NBRC 15112]
gi|407727569|dbj|BAM47567.1| protein RecA [Amphibacillus xylanus NBRC 15112]
Length = 342
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I FGKGS+ +LG + T SG L LD+ALG GG P+GR++EI
Sbjct: 3 DRKQALDQALKSIERQFGKGSIMKLGDQAEHKIATVSSGSLALDIALGIGGYPRGRVIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHAIAEVQK GG A +DAEHA DP Y+K LGV+ + L++ QPD GE
Sbjct: 63 YGPESSGKTTVSLHAIAEVQKRGGTAAFIDAEHALDPVYAKNLGVNTDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQ+R KIGV +GNPE T GG ALKF+ASVRLE+R IK +G+E VG R
Sbjct: 183 SQTTAIFINQVREKIGVMFGNPETTPGGRALKFYASVRLEVRRAETIK--QGNEMVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+KQAE +I++GEG+S+ G +LD A +DIV + GAWYSY + RLGQGR
Sbjct: 241 KIKVVKNKVAPPFKQAEVDIMYGEGISQEGELLDIASDLDIVQKSGAWYSYNEVRLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ + +YLR++P L +EI + VR+
Sbjct: 301 ENSKEYLREHPELIDEINRAVRA 323
>gi|422346343|ref|ZP_16427257.1| protein recA [Clostridium perfringens WAL-14572]
gi|373225888|gb|EHP48215.1| protein recA [Clostridium perfringens WAL-14572]
Length = 352
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +A++ AM I FGKGSV +LG G ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 DKLKAIEMAMGQIEKQFGKGSVMKLGEHGAPQMDAVSTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QKLGG A +DAEHA DP Y+K LGV++++L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 127 ALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+G+ +GNPE T GG ALKF+ASVR++IR IK +GD G R
Sbjct: 187 SNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIK--QGDGITGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQAEF+I++ EG+SK G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A QYL++NP + +IE +R S
Sbjct: 305 ENAKQYLKENPAVALDIENQIREKYS 330
>gi|262372265|ref|ZP_06065544.1| recA protein [Acinetobacter junii SH205]
gi|262312290|gb|EEY93375.1| recA protein [Acinetobacter junii SH205]
Length = 348
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/343 (54%), Positives = 255/343 (74%), Gaps = 3/343 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+++A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFREAVFQIMYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPN 431
+ ++Y +N + EIEKVVR + + + + +V P+
Sbjct: 302 NNVIRYFEENSKIAAEIEKVVREQLLTKNNPEAAPTEDVEEPD 344
>gi|18310655|ref|NP_562589.1| recombinase A [Clostridium perfringens str. 13]
gi|110799772|ref|YP_696360.1| recombinase A [Clostridium perfringens ATCC 13124]
gi|168211439|ref|ZP_02637064.1| recA protein [Clostridium perfringens B str. ATCC 3626]
gi|168214494|ref|ZP_02640119.1| recA protein [Clostridium perfringens CPE str. F4969]
gi|422874594|ref|ZP_16921079.1| recombinase A [Clostridium perfringens F262]
gi|3219851|sp|P94666.1|RECA_CLOPE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123148691|sp|Q0TPT0.1|RECA_CLOP1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|1698591|gb|AAC45139.1| RecA protein [Clostridium perfringens]
gi|18145336|dbj|BAB81379.1| recA protein [Clostridium perfringens str. 13]
gi|110674419|gb|ABG83406.1| recA protein [Clostridium perfringens ATCC 13124]
gi|170710594|gb|EDT22776.1| recA protein [Clostridium perfringens B str. ATCC 3626]
gi|170714025|gb|EDT26207.1| recA protein [Clostridium perfringens CPE str. F4969]
gi|380304235|gb|EIA16524.1| recombinase A [Clostridium perfringens F262]
Length = 352
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +A++ AM I FGKGSV +LG G ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 DKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QKLGG A +DAEHA DP Y+K LGV++++L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 127 ALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+G+ +GNPE T GG ALKF+ASVR++IR IK +GD G R
Sbjct: 187 SNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIK--QGDGITGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQAEF+I++ EG+SK G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A QYL++NP + +IE +R S
Sbjct: 305 ENAKQYLKENPAVALDIENQIREKYS 330
>gi|434386813|ref|YP_007097424.1| protein RecA [Chamaesiphon minutus PCC 6605]
gi|428017803|gb|AFY93897.1| protein RecA [Chamaesiphon minutus PCC 6605]
Length = 359
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 252/327 (77%), Gaps = 1/327 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DRQ+AL+ +N I SFGKG++ RLG A VET SG +TLD+ALGGGLPKGR++EI+
Sbjct: 10 DRQKALNLVLNQIEKSFGKGAIMRLGDAQRMRVETISSGAMTLDIALGGGLPKGRVIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAI+E+Q+ GG A VDAEHA DP+YS ALGVD+ NL+V QPD+GE A
Sbjct: 70 GPESSGKTTLALHAISEIQRSGGVAAFVDAEHALDPTYSAALGVDINNLLVSQPDSGEAA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++G+ SK+
Sbjct: 130 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGSISKS 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K E G RV+
Sbjct: 190 GCTVIFINQLRQKIGVTYGSPETTTGGTALKFYASVRLDIRRIQTLKRANEGE-YGNRVK 248
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE ++ R+GAWYSY L QGRD
Sbjct: 249 VKVAKNKVAPPFRIAEFDIIFGKGISTVGCLVDLAEETGVITRRGAWYSYEGDNLAQGRD 308
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDG 416
++Y+ +N ++++ V ++ G
Sbjct: 309 NTVKYMEENAEFVTKVQQQVLDKLNTG 335
>gi|335043023|ref|ZP_08536050.1| recA/RadA recombinase [Methylophaga aminisulfidivorans MP]
gi|333789637|gb|EGL55519.1| recA/RadA recombinase [Methylophaga aminisulfidivorans MP]
Length = 346
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 244/326 (74%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+++AL AA+ I FGKGSV RLG A V SG + LD+ALG GGLP+GRIVE
Sbjct: 4 DKKKALGAALGQIEKQFGKGSVMRLGDNAAARDVSAVSSGSIGLDIALGIGGLPRGRIVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LHAIAE+QKLGG A VDAEHA DP Y++ LGV++++L+V QPD GE
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKLGGTAAFVDAEHALDPVYAEKLGVNIDDLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N
Sbjct: 124 QALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 184 RSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--KGDEILGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+S+ G ++D +IV + GAWYSY R+GQG
Sbjct: 242 TRVKVVKNKVAPPFKQVEFDIMYGEGISREGELIDLGVQQNIVEKSGAWYSYNGTRIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+D YL++NP + EIE +R M
Sbjct: 302 KDNVRGYLKENPEMSAEIESKIRETM 327
>gi|255021553|ref|ZP_05293596.1| RecA protein [Acidithiobacillus caldus ATCC 51756]
gi|340782427|ref|YP_004749034.1| RecA protein [Acidithiobacillus caldus SM-1]
gi|254968941|gb|EET26460.1| RecA protein [Acidithiobacillus caldus ATCC 51756]
gi|340556579|gb|AEK58333.1| RecA protein [Acidithiobacillus caldus SM-1]
Length = 347
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 246/323 (76%), Gaps = 4/323 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
R +AL AA++ I+ FGKG++ RLG ++ + +G L LDLALG GGLP+GR+VEI
Sbjct: 5 RSKALAAALSQIDKQFGKGAIMRLGEQSAVKDIQVYSTGSLGLDLALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHAIA Q GG A +DAEHA DPSY++ LGVD+ENL++ QPD GE
Sbjct: 65 YGPESSGKTTLTLHAIASCQASGGTAAFIDAEHALDPSYAQKLGVDLENLLISQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+DLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++ N S+
Sbjct: 125 ALEIADMLVRSGAVDLIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANISR 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 185 TNTLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGTIK--KGDEILGSDT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF I +GEG+S+L ++D DI+ + GAWYSY +R+GQG+
Sbjct: 243 RVKVVKNKVAPPFREAEFAIYYGEGISRLSELVDLGVKFDIIEKSGAWYSYKGERIGQGK 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
D A Q+L++ P + +EIE+ VR+
Sbjct: 303 DNARQFLKERPEMAKEIEERVRA 325
>gi|399923785|ref|ZP_10781143.1| recombinase A [Peptoniphilus rhinitidis 1-13]
Length = 355
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/322 (57%), Positives = 248/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q AL ++ I +G+GSV LG +++ P+G L LD+ALG GG+PKGRI+EI
Sbjct: 14 EKQDALHNVLSKIEKQYGEGSVMILGDDVRLDIDSIPTGSLALDIALGIGGIPKGRIIEI 73
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH +AE QK+GG VDAEHA DP Y+K LGVD+ENLI+ QPD GE
Sbjct: 74 YGPESSGKTTLALHMLAEAQKMGGTGAFVDAEHALDPGYAKNLGVDIENLIISQPDTGEQ 133
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RS A++L+ +DSV+AL P+AEI+GE+G QIGLQARLMSQALRK++G +K
Sbjct: 134 ALEITEALVRSNAVELVVIDSVAALVPKAEIDGEMGATQIGLQARLMSQALRKLTGAINK 193
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ CT++F+NQ+R K+GV +GNPE T+GG ALKF++SVRL+IR + IK KGDE VG RV
Sbjct: 194 SKCTVVFINQLREKVGVMFGNPETTTGGRALKFYSSVRLDIRRSENIK--KGDEIVGNRV 251
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P++QAEF++++G+G+SK G +LD A DIV + GAWYSY ++RLGQGR
Sbjct: 252 RVKVVKNKIAPPFRQAEFDVMYGKGISKTGNILDVAAEADIVKKAGAWYSYEEERLGQGR 311
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A YL ++ L +EIE VR
Sbjct: 312 ENAKDYLEEHQELLDEIEHKVR 333
>gi|395802554|ref|ZP_10481806.1| recombinase A [Flavobacterium sp. F52]
gi|395434995|gb|EJG00937.1| recombinase A [Flavobacterium sp. F52]
Length = 335
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/326 (56%), Positives = 247/326 (75%), Gaps = 3/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G VET SG L +DLALG G PKGRI+EI+
Sbjct: 8 KLKALQLTLDKLDKTYGKGTVMKMGDRAIVEVETISSGSLGVDLALGVNGYPKGRIIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD +Y++ L VD+ENLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRNYAEKLNVDIENLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIA+ + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G SK
Sbjct: 128 LEIAENLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGTISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+ F+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G+ +G R +
Sbjct: 188 NCTVFFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSAQIKD--GENVIGNRTK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P+K AEF+I++GEGVSK G +LD A DIV + G+W+SYGD +LGQGRD
Sbjct: 246 VKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFDIVKKAGSWFSYGDTKLGQGRD 305
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSD 415
++DNP L EE+E ++ M +
Sbjct: 306 AVKTLIKDNPELAEELEVKIKEHMKE 331
>gi|385233454|ref|YP_005794796.1| recombinase A [Ketogulonicigenium vulgare WSH-001]
gi|343462365|gb|AEM40800.1| recombinase A [Ketogulonicigenium vulgare WSH-001]
Length = 362
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 250/330 (75%), Gaps = 4/330 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GGLPK 142
D + D+Q+ALD+A+ I FGKG++ RLG A +E +G L LD+ALG GGLPK
Sbjct: 11 DKKASDKQKALDSALAQIERQFGKGAIMRLGGANALPEIEATSTGSLGLDIALGIGGLPK 70
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EIFGPESSGKTTL LHA+AE QK GG VDAEHA DPSY+K LGV+++ L++ Q
Sbjct: 71 GRIIEIFGPESSGKTTLTLHAVAEEQKKGGVCAFVDAEHALDPSYAKKLGVNLDELLISQ 130
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+ ++ VDSV+ALTP++EIEG++G +G+ ARLMSQA+RK+
Sbjct: 131 PDTGEQALEIVDTLVRSGAVSMVVVDSVAALTPKSEIEGDMGDSSVGVHARLMSQAMRKL 190
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G+ S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE
Sbjct: 191 TGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKDR--DE 248
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG RV+V K+KV+ P+KQ EF+I++GEG+SK G ++D +V + G+W+SYGDQ
Sbjct: 249 VVGNSTRVKVVKNKVAPPFKQVEFDIMYGEGISKRGEIIDLGVKAGVVEKSGSWFSYGDQ 308
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSM 412
R+GQGR+ A Q+LRDNP + +EIE +R+M
Sbjct: 309 RIGQGRENAKQFLRDNPAISDEIEGKIRAM 338
>gi|270284057|ref|ZP_05965477.2| protein RecA [Bifidobacterium gallicum DSM 20093]
gi|270278014|gb|EFA23868.1| protein RecA [Bifidobacterium gallicum DSM 20093]
Length = 388
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
RQ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLP+GRIVEI+
Sbjct: 38 RQEALDTALKQVEKSFGKGSAMRLGDRPEQDVEVIPTGSLALDMALGIGGLPRGRIVEIY 97
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A Q+ GG A +DAEHA DP Y++ LGVD ++LIV QPDNGE A
Sbjct: 98 GPESSGKTTLALHVVANAQRNGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQA 157
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I VDSV+AL P+AEIEG++G +GLQARLMSQALRKM+G ++A
Sbjct: 158 LEIADMLIRSGALDVIVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALAQA 217
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++G+PE T+GG ALKF++SVRL+IR IK+ GDE VG R R
Sbjct: 218 GTTAIFINQLREKIGVFFGSPETTTGGKALKFYSSVRLDIRRIQTIKA--GDEAVGNRTR 275
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+S+ G +LD A D+V + G+W++Y +LGQGR+
Sbjct: 276 VKVVKNKMAPPFKSAEFDVLYGEGISREGSILDMALQTDVVKKSGSWFTYNGDQLGQGRE 335
Query: 390 KALQYLRDNPLLQEEIEKVVR 410
+YL+D P L +IE V+
Sbjct: 336 NVRKYLKDTPELARQIEDQVK 356
>gi|146298749|ref|YP_001193340.1| recA protein [Flavobacterium johnsoniae UW101]
gi|146153167|gb|ABQ04021.1| recA protein [Flavobacterium johnsoniae UW101]
Length = 335
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 249/326 (76%), Gaps = 3/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G VET SG L +DLALG G PKGRI+EI+
Sbjct: 8 KLKALQLTLDKLDKTYGKGTVMKMGDRAIVEVETISSGSLGVDLALGVNGYPKGRIIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD +Y++ L VD+ENLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRNYAEKLNVDIENLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIA+ + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G SK
Sbjct: 128 LEIAENLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGTISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+ F+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G+ +G R +
Sbjct: 188 NCTVFFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSAQIKD--GENVIGNRTK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P+K AEF+I++GEGVSK G +LD A DIV + G+W+SYGD +LGQGRD
Sbjct: 246 VKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFDIVKKAGSWFSYGDTKLGQGRD 305
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSD 415
++DNP L +E+E+ +++ M +
Sbjct: 306 AVKALIKDNPELADELEEKIKAHMKE 331
>gi|427738696|ref|YP_007058240.1| protein RecA [Rivularia sp. PCC 7116]
gi|427373737|gb|AFY57693.1| protein RecA [Rivularia sp. PCC 7116]
Length = 359
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/328 (58%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I +FGKG++ RLG A VET +G LTLDLALGGGLPKGR+VEI+G
Sbjct: 11 KQKALGMVLNQIERTFGKGTIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVVEIYG 70
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHA+AE+QK GG A VDAEHA DP+Y+ ALGVD+ENL++ QPD GE AL
Sbjct: 71 PESSGKTTVALHAVAEMQKEGGIAAYVDAEHALDPTYAAALGVDIENLLISQPDTGEAAL 130
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 131 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 190
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT++F+NQ+R KIG+ YGNPE T+GG ALK+++SVRL+IR +K KG E+ G+RV+V
Sbjct: 191 CTVMFINQLRMKIGISYGNPETTTGGNALKYYSSVRLDIRRIQTLK--KGTEEFGIRVKV 248
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF++IFG+G+S LGC++D AE ++ RKGAWYSY + QGRD
Sbjct: 249 KVAKNKVAPPFRIAEFDVIFGKGISTLGCIVDLAEETSVINRKGAWYSYNGDNISQGRDN 308
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P L EEI + VR + G+V
Sbjct: 309 AIKYLEEKPELLEEIRQKVREKLDLGAV 336
>gi|90818648|emb|CAJ32629.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/324 (59%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDKVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A YL++NP + EIE +R
Sbjct: 312 GRENAKLYLKENPEVAREIETTLR 335
>gi|379011812|ref|YP_005269624.1| recombinase A [Acetobacterium woodii DSM 1030]
gi|375302601|gb|AFA48735.1| recombinase A [Acetobacterium woodii DSM 1030]
Length = 359
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/357 (52%), Positives = 261/357 (73%), Gaps = 12/357 (3%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ +F D+Q+ALDAA+ +I SFGKG+V RLG L V+ + + LD+ALG GG+P+
Sbjct: 8 NEQFSDKQKALDAALKNIERSFGKGAVMRLGDDAAKLNVDVISTSSIGLDMALGVGGVPR 67
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR+VEI+GPESSGKTTLALH IAE Q+ GGNA VDAEHA DP+Y+KALGVD++NL+V Q
Sbjct: 68 GRVVEIYGPESSGKTTLALHIIAEAQRTGGNAAFVDAEHALDPTYAKALGVDIDNLLVAQ 127
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE A+EI + + RS AID++ +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+
Sbjct: 128 PDTGEQAMEIVEALVRSNAIDVVVIDSVAALVPRAEIDGEMGDSHMGLQARLMSQALRKL 187
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G K+ T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVR+++R +K KG E
Sbjct: 188 TGVIKKSNTTTIFINQLREKIGVMFGNPETTTGGKALKFYASVRIDVRRIESLK--KGTE 245
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G R R ++ K+K++ P+KQAEF+I++G+G+S+ G +LD IV + G+W+SYG+Q
Sbjct: 246 IIGNRTRAKIVKNKIAPPFKQAEFDIMYGKGISREGDLLDVGVDFGIVDKSGSWFSYGEQ 305
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
RLGQGRD + +YL NP + IEK +R + + + V+ P++ E+ L +
Sbjct: 306 RLGQGRDNSKEYLIANPEVANTIEKEIRD--------KNALNKIVADPDEHEDDLTD 354
>gi|317121901|ref|YP_004101904.1| recombinase A [Thermaerobacter marianensis DSM 12885]
gi|315591881|gb|ADU51177.1| RecA protein [Thermaerobacter marianensis DSM 12885]
Length = 340
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/337 (54%), Positives = 253/337 (75%), Gaps = 4/337 (1%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRI 145
++R+RAL+ A++ I FGKGS+ R+G A L VE P+G L LD+ALG GG+P+GRI
Sbjct: 1 MIERERALEIALSQIEKQFGKGSIMRMGEASSRLNVEVIPTGSLALDIALGVGGMPRGRI 60
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
+EIFGPE+SGKTT+ALH A Q+ GG A +DAEHA DP Y++ LGVD+ NL++ QPD
Sbjct: 61 IEIFGPEASGKTTVALHVAASAQRAGGVAAFIDAEHALDPVYAENLGVDINNLLISQPDT 120
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIA+ + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
+K+ LIF+NQIR K+GV +GNPEVT GG ALKF+ASVRL++R +K +G E +G
Sbjct: 181 IAKSRTCLIFINQIREKVGVMFGNPEVTPGGRALKFYASVRLDVRRVETLK--QGGEMIG 238
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
+R R +V K+KV+ P++QAEF++I+G+G+S+ G +LD A I+ + GAWYSYGD R+G
Sbjct: 239 IRARAKVVKNKVAPPFRQAEFDLIYGKGISREGDLLDIATQHGIIEKSGAWYSYGDTRIG 298
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
QGR+ A +YL +P + + IE+ VR ++S G + +
Sbjct: 299 QGRENAREYLVQHPEVADAIEQRVRELLSLGGIRAAT 335
>gi|169633342|ref|YP_001707078.1| recombinase A [Acinetobacter baumannii SDF]
gi|169795694|ref|YP_001713487.1| recombinase A [Acinetobacter baumannii AYE]
gi|184158405|ref|YP_001846744.1| recombinase A [Acinetobacter baumannii ACICU]
gi|213158361|ref|YP_002319659.1| recombinase A [Acinetobacter baumannii AB0057]
gi|215483180|ref|YP_002325387.1| protein RecA [Acinetobacter baumannii AB307-0294]
gi|229577096|ref|YP_001084991.2| recombinase A [Acinetobacter baumannii ATCC 17978]
gi|239501635|ref|ZP_04660945.1| recombinase A [Acinetobacter baumannii AB900]
gi|260554756|ref|ZP_05826977.1| recA protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|301348114|ref|ZP_07228855.1| recombinase A [Acinetobacter baumannii AB056]
gi|301512103|ref|ZP_07237340.1| recombinase A [Acinetobacter baumannii AB058]
gi|301597370|ref|ZP_07242378.1| recombinase A [Acinetobacter baumannii AB059]
gi|332852512|ref|ZP_08434251.1| RecA protein [Acinetobacter baumannii 6013150]
gi|332871284|ref|ZP_08439833.1| RecA protein [Acinetobacter baumannii 6013113]
gi|332873896|ref|ZP_08441836.1| RecA protein [Acinetobacter baumannii 6014059]
gi|384132509|ref|YP_005515121.1| recA [Acinetobacter baumannii 1656-2]
gi|384143510|ref|YP_005526220.1| recombinase A [Acinetobacter baumannii MDR-ZJ06]
gi|385237835|ref|YP_005799174.1| recombinase A [Acinetobacter baumannii TCDC-AB0715]
gi|387123646|ref|YP_006289528.1| protein RecA [Acinetobacter baumannii MDR-TJ]
gi|407933108|ref|YP_006848751.1| recA [Acinetobacter baumannii TYTH-1]
gi|416148628|ref|ZP_11602455.1| recombinase A [Acinetobacter baumannii AB210]
gi|417549009|ref|ZP_12200089.1| RecA protein [Acinetobacter baumannii Naval-18]
gi|417553293|ref|ZP_12204363.1| RecA protein [Acinetobacter baumannii Naval-81]
gi|417562600|ref|ZP_12213479.1| RecA protein [Acinetobacter baumannii OIFC137]
gi|417567491|ref|ZP_12218363.1| RecA protein [Acinetobacter baumannii OIFC143]
gi|417568604|ref|ZP_12219467.1| RecA protein [Acinetobacter baumannii OIFC189]
gi|417572576|ref|ZP_12223430.1| RecA protein [Acinetobacter baumannii Canada BC-5]
gi|417578012|ref|ZP_12228849.1| RecA protein [Acinetobacter baumannii Naval-17]
gi|417871744|ref|ZP_12516671.1| recombinase A [Acinetobacter baumannii ABNIH1]
gi|417873723|ref|ZP_12518588.1| recombinase A [Acinetobacter baumannii ABNIH2]
gi|417882601|ref|ZP_12526890.1| recombinase A [Acinetobacter baumannii ABNIH4]
gi|421200286|ref|ZP_15657446.1| RecA protein [Acinetobacter baumannii OIFC109]
gi|421204120|ref|ZP_15661249.1| recombinase A [Acinetobacter baumannii AC12]
gi|421457340|ref|ZP_15906677.1| RecA protein [Acinetobacter baumannii IS-123]
gi|421534471|ref|ZP_15980744.1| recombinase A [Acinetobacter baumannii AC30]
gi|421621683|ref|ZP_16062598.1| RecA protein [Acinetobacter baumannii OIFC074]
gi|421627143|ref|ZP_16067956.1| RecA protein [Acinetobacter baumannii OIFC098]
gi|421630008|ref|ZP_16070723.1| RecA protein [Acinetobacter baumannii OIFC180]
gi|421633702|ref|ZP_16074331.1| RecA protein [Acinetobacter baumannii Naval-13]
gi|421644384|ref|ZP_16084868.1| RecA protein [Acinetobacter baumannii IS-235]
gi|421645926|ref|ZP_16086381.1| RecA protein [Acinetobacter baumannii IS-251]
gi|421651720|ref|ZP_16092087.1| RecA protein [Acinetobacter baumannii OIFC0162]
gi|421658484|ref|ZP_16098717.1| RecA protein [Acinetobacter baumannii Naval-83]
gi|421664217|ref|ZP_16104357.1| RecA protein [Acinetobacter baumannii OIFC110]
gi|421675545|ref|ZP_16115466.1| RecA protein [Acinetobacter baumannii OIFC065]
gi|421677010|ref|ZP_16116904.1| RecA protein [Acinetobacter baumannii OIFC111]
gi|421686624|ref|ZP_16126371.1| RecA protein [Acinetobacter baumannii IS-143]
gi|421691636|ref|ZP_16131295.1| RecA protein [Acinetobacter baumannii IS-116]
gi|421696007|ref|ZP_16135603.1| RecA protein [Acinetobacter baumannii WC-692]
gi|421698740|ref|ZP_16138279.1| RecA protein [Acinetobacter baumannii IS-58]
gi|421703881|ref|ZP_16143337.1| recombinase A [Acinetobacter baumannii ZWS1122]
gi|421707664|ref|ZP_16147055.1| recombinase A [Acinetobacter baumannii ZWS1219]
gi|421788299|ref|ZP_16224603.1| RecA protein [Acinetobacter baumannii Naval-82]
gi|421794625|ref|ZP_16230723.1| RecA protein [Acinetobacter baumannii Naval-2]
gi|421795586|ref|ZP_16231668.1| RecA protein [Acinetobacter baumannii Naval-21]
gi|421801278|ref|ZP_16237240.1| RecA protein [Acinetobacter baumannii Canada BC1]
gi|421804378|ref|ZP_16240288.1| RecA protein [Acinetobacter baumannii WC-A-694]
gi|424052069|ref|ZP_17789601.1| protein recA [Acinetobacter baumannii Ab11111]
gi|424059633|ref|ZP_17797124.1| protein recA [Acinetobacter baumannii Ab33333]
gi|424063571|ref|ZP_17801056.1| protein recA [Acinetobacter baumannii Ab44444]
gi|425748699|ref|ZP_18866683.1| RecA protein [Acinetobacter baumannii WC-348]
gi|425751868|ref|ZP_18869809.1| RecA protein [Acinetobacter baumannii Naval-113]
gi|445405220|ref|ZP_21431197.1| RecA protein [Acinetobacter baumannii Naval-57]
gi|445461237|ref|ZP_21448650.1| RecA protein [Acinetobacter baumannii OIFC047]
gi|445471296|ref|ZP_21452049.1| RecA protein [Acinetobacter baumannii OIFC338]
gi|445475945|ref|ZP_21453578.1| RecA protein [Acinetobacter baumannii Naval-78]
gi|445492094|ref|ZP_21460041.1| RecA protein [Acinetobacter baumannii AA-014]
gi|226737747|sp|B7H1V4.1|RECA_ACIB3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226737748|sp|B7I9U0.1|RECA_ACIB5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238685519|sp|A3M645.2|RECA_ACIBT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238688039|sp|B0V6E0.1|RECA_ACIBY RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238688140|sp|B0VMV7.1|RECA_ACIBS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238691026|sp|B2I316.1|RECA_ACIBC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|169148621|emb|CAM86487.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter baumannii AYE]
gi|169152134|emb|CAP01033.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter baumannii]
gi|183209999|gb|ACC57397.1| RecA/RadA recombinase [Acinetobacter baumannii ACICU]
gi|193077556|gb|ABO12389.2| DNA strand exchange and recombination protein [Acinetobacter
baumannii ATCC 17978]
gi|213057521|gb|ACJ42423.1| DNA strand exchange and recombination protein RecA [Acinetobacter
baumannii AB0057]
gi|213987860|gb|ACJ58159.1| protein RecA [Acinetobacter baumannii AB307-0294]
gi|260411298|gb|EEX04595.1| recA protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322508729|gb|ADX04183.1| recA [Acinetobacter baumannii 1656-2]
gi|323518334|gb|ADX92715.1| recombinase A [Acinetobacter baumannii TCDC-AB0715]
gi|332729214|gb|EGJ60557.1| RecA protein [Acinetobacter baumannii 6013150]
gi|332731568|gb|EGJ62854.1| RecA protein [Acinetobacter baumannii 6013113]
gi|332737882|gb|EGJ68769.1| RecA protein [Acinetobacter baumannii 6014059]
gi|333364897|gb|EGK46911.1| recombinase A [Acinetobacter baumannii AB210]
gi|342224582|gb|EGT89608.1| recombinase A [Acinetobacter baumannii ABNIH1]
gi|342230591|gb|EGT95422.1| recombinase A [Acinetobacter baumannii ABNIH2]
gi|342237454|gb|EGU01923.1| recombinase A [Acinetobacter baumannii ABNIH4]
gi|347594003|gb|AEP06724.1| recombinase A [Acinetobacter baumannii MDR-ZJ06]
gi|385878138|gb|AFI95233.1| protein RecA [Acinetobacter baumannii MDR-TJ]
gi|395525182|gb|EJG13271.1| RecA protein [Acinetobacter baumannii OIFC137]
gi|395553163|gb|EJG19171.1| RecA protein [Acinetobacter baumannii OIFC143]
gi|395554899|gb|EJG20901.1| RecA protein [Acinetobacter baumannii OIFC189]
gi|395563887|gb|EJG25539.1| RecA protein [Acinetobacter baumannii OIFC109]
gi|395568709|gb|EJG29379.1| RecA protein [Acinetobacter baumannii Naval-17]
gi|398326280|gb|EJN42429.1| recombinase A [Acinetobacter baumannii AC12]
gi|400207064|gb|EJO38035.1| RecA protein [Acinetobacter baumannii IS-123]
gi|400208144|gb|EJO39114.1| RecA protein [Acinetobacter baumannii Canada BC-5]
gi|400386977|gb|EJP50050.1| RecA protein [Acinetobacter baumannii Naval-18]
gi|400393552|gb|EJP60598.1| RecA protein [Acinetobacter baumannii Naval-81]
gi|404562245|gb|EKA67469.1| RecA protein [Acinetobacter baumannii IS-116]
gi|404563990|gb|EKA69184.1| RecA protein [Acinetobacter baumannii WC-692]
gi|404567731|gb|EKA72848.1| RecA protein [Acinetobacter baumannii IS-143]
gi|404572059|gb|EKA77104.1| RecA protein [Acinetobacter baumannii IS-58]
gi|404664575|gb|EKB32553.1| protein recA [Acinetobacter baumannii Ab11111]
gi|404670371|gb|EKB38263.1| protein recA [Acinetobacter baumannii Ab33333]
gi|404674163|gb|EKB41923.1| protein recA [Acinetobacter baumannii Ab44444]
gi|407191431|gb|EKE62632.1| recombinase A [Acinetobacter baumannii ZWS1122]
gi|407191770|gb|EKE62960.1| recombinase A [Acinetobacter baumannii ZWS1219]
gi|407901689|gb|AFU38520.1| recA [Acinetobacter baumannii TYTH-1]
gi|408505709|gb|EKK07429.1| RecA protein [Acinetobacter baumannii IS-235]
gi|408507653|gb|EKK09347.1| RecA protein [Acinetobacter baumannii OIFC0162]
gi|408517919|gb|EKK19454.1| RecA protein [Acinetobacter baumannii IS-251]
gi|408693522|gb|EKL39125.1| RecA protein [Acinetobacter baumannii OIFC098]
gi|408697280|gb|EKL42795.1| RecA protein [Acinetobacter baumannii OIFC074]
gi|408699357|gb|EKL44837.1| RecA protein [Acinetobacter baumannii OIFC180]
gi|408706232|gb|EKL51556.1| RecA protein [Acinetobacter baumannii Naval-13]
gi|408709918|gb|EKL55157.1| RecA protein [Acinetobacter baumannii Naval-83]
gi|408712514|gb|EKL57697.1| RecA protein [Acinetobacter baumannii OIFC110]
gi|409987676|gb|EKO43856.1| recombinase A [Acinetobacter baumannii AC30]
gi|410382476|gb|EKP35030.1| RecA protein [Acinetobacter baumannii OIFC065]
gi|410393667|gb|EKP46019.1| RecA protein [Acinetobacter baumannii OIFC111]
gi|410394243|gb|EKP46581.1| RecA protein [Acinetobacter baumannii Naval-2]
gi|410401536|gb|EKP53676.1| RecA protein [Acinetobacter baumannii Naval-21]
gi|410403507|gb|EKP55599.1| RecA protein [Acinetobacter baumannii Naval-82]
gi|410405932|gb|EKP57966.1| RecA protein [Acinetobacter baumannii Canada BC1]
gi|410411749|gb|EKP63618.1| RecA protein [Acinetobacter baumannii WC-A-694]
gi|425490744|gb|EKU57039.1| RecA protein [Acinetobacter baumannii WC-348]
gi|425499624|gb|EKU65656.1| RecA protein [Acinetobacter baumannii Naval-113]
gi|444763333|gb|ELW87669.1| RecA protein [Acinetobacter baumannii AA-014]
gi|444771731|gb|ELW95856.1| RecA protein [Acinetobacter baumannii OIFC047]
gi|444772036|gb|ELW96160.1| RecA protein [Acinetobacter baumannii OIFC338]
gi|444778489|gb|ELX02501.1| RecA protein [Acinetobacter baumannii Naval-78]
gi|444781970|gb|ELX05881.1| RecA protein [Acinetobacter baumannii Naval-57]
gi|452952511|gb|EME57942.1| recombinase A [Acinetobacter baumannii MSP4-16]
Length = 349
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 253/335 (75%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVH 419
+ ++Y +N + EEIE+ +R + ++G+V
Sbjct: 302 NNVIRYFEENTQIAEEIERNIREQLLTTGTNGAVQ 336
>gi|359428516|ref|ZP_09219548.1| protein RecA [Acinetobacter sp. NBRC 100985]
gi|358236059|dbj|GAB01087.1| protein RecA [Acinetobacter sp. NBRC 100985]
Length = 348
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/350 (53%), Positives = 257/350 (73%), Gaps = 7/350 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEITGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+K+A F+I++G G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFKEAVFQIMYGRGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILE 438
+ +++ +NP + +EIEK++R + + + N + +E + LE
Sbjct: 302 NNVIRHFEENPQMAQEIEKLIREQL----LTKNKPAENTDIEEEEPDFLE 347
>gi|269219572|ref|ZP_06163426.1| protein RecA [Actinomyces sp. oral taxon 848 str. F0332]
gi|269210814|gb|EEZ77154.1| protein RecA [Actinomyces sp. oral taxon 848 str. F0332]
Length = 348
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 247/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +ALD A++ I+ FGKGSV RLG ++ P+G +LD+ALG GGLP+GR++E+
Sbjct: 7 DRAKALDVALSQIDRQFGKGSVMRLGDHVQTKIQVIPTGATSLDVALGVGGLPRGRVIEV 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+K LGVD + LIV QPD GE
Sbjct: 67 YGPESSGKTTVALHAVANAQKNGGIAAFIDAEHALDPEYAKKLGVDTDALIVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 127 ALEIADMLIRSGALDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL++R +K +G E VG R
Sbjct: 187 SGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDVRRIETLK--EGSEPVGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++G+G+S+ GC++D IV + GAWY+Y +LGQG+
Sbjct: 245 RVKVVKNKMAPPFKQAEFDIMYGQGISREGCIIDMGVDGGIVRKSGAWYTYDGDQLGQGK 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+KA +LRDNP + +EIE + + M
Sbjct: 305 EKARHFLRDNPEIADEIEGKILAKM 329
>gi|294790979|ref|ZP_06756137.1| protein RecA [Scardovia inopinata F0304]
gi|294458876|gb|EFG27229.1| protein RecA [Scardovia inopinata F0304]
Length = 368
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 254/345 (73%), Gaps = 6/345 (1%)
Query: 80 SSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-G 138
+ D+ ++ RQ AL+ A+ + +FGKGS RLG VE P+G L LD+ALG G
Sbjct: 4 TKDAAKAQDAQRQAALNTALAQVEKAFGKGSAMRLGDKPVTHVEVIPTGSLALDMALGIG 63
Query: 139 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENL 198
GLP+GRIVEIFGPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y++ LGVD ++L
Sbjct: 64 GLPRGRIVEIFGPESSGKTTIALHAVANAQRNGGVAAFIDAEHALDPEYARNLGVDTDSL 123
Query: 199 IVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 258
I+ QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEI+GE+G +GLQARLMSQA
Sbjct: 124 IISQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDNHVGLQARLMSQA 183
Query: 259 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318
LRKM+G S++ T +F+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR +K+
Sbjct: 184 LRKMTGALSQSHTTAVFINQLREKIGVMFGNPETTTGGKALKFYASVRLDIRRVQTLKN- 242
Query: 319 KGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYS 378
GDE +G R RV+V K+K++ P+K AEF+I++GEGVS+ G ++D A I+ + G+W++
Sbjct: 243 -GDEAIGNRTRVKVVKNKMAPPFKSAEFDILYGEGVSREGSIIDMALSTGIIKKSGSWFT 301
Query: 379 YGDQRLGQGRDKALQYLRDNPLLQEEIE---KVVRSMMSDGSVHQ 420
Y +LGQGR++ Q+L+DNP L+ E+E KV ++ D + Q
Sbjct: 302 YDGDQLGQGRERVRQFLKDNPELETELETKIKVAYGLIPDPNAAQ 346
>gi|344924247|ref|ZP_08777708.1| recombination protein [Candidatus Odyssella thessalonicensis L13]
gi|297717870|gb|ADI50078.1| RecA protein [Candidatus Odyssella thessalonicensis L13]
Length = 349
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 250/330 (75%), Gaps = 6/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALDAA++ I +FGKGSV RLG +E SG L LD+ALG GG P+GRI+EI
Sbjct: 5 DKGKALDAALSQIERAFGKGSVMRLGQRETVEIEALSSGSLGLDIALGIGGFPRGRIIEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALHA+AE QK+GG VDAEHA DPSY++ LGV+++NLI+ QPD GE
Sbjct: 65 YGPESSGKTTLALHAVAEAQKVGGTCAFVDAEHALDPSYARKLGVNIDNLIISQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID++ VDSV+AL P+AE+EG++G +GLQARLMSQALRK++G+ +K
Sbjct: 125 ALEIADTLVRSGAIDVLIVDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKLAGSINK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK D+ G +
Sbjct: 185 TNCMVIFINQIRQKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKD--KDQVTGNQT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+K +F+I++GEGVSK G ++D +V + G+WYS G QR+GQG+
Sbjct: 243 RVKVVKNKMAPPFKVVDFDIMYGEGVSKTGELIDLGVSAGVVEKAGSWYSMGSQRIGQGK 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRS---MMSD 415
+ A Q+LRDNP + +IE +R+ ++SD
Sbjct: 303 EAARQFLRDNPDIANQIETAIRNNAGLLSD 332
>gi|402757854|ref|ZP_10860110.1| recombinase A [Acinetobacter sp. NCTC 7422]
Length = 348
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 249/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEITGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFKEAVFQIMYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++ +NP + +EIEK++R +
Sbjct: 302 NNVIRHFEENPAMAQEIEKLIREQL 326
>gi|352683763|ref|YP_004895747.1| recA protein [Acidaminococcus intestini RyC-MR95]
gi|350278417|gb|AEQ21607.1| recA protein [Acidaminococcus intestini RyC-MR95]
Length = 354
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/323 (55%), Positives = 252/323 (78%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I FGKGS+ +LG+A + +ET P+G L+LD+ALG GG+P+GRI+E
Sbjct: 6 EKGKALDAAVKQIEKDFGKGSIMKLGAASAKMNIETIPTGALSLDIALGVGGIPRGRIIE 65
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAE QK GG A +DAEHA DP Y++ LGVD++NL++ QPD GE
Sbjct: 66 IYGPESSGKTTVALHMIAEAQKRGGYAAFIDAEHALDPEYARHLGVDIDNLLISQPDTGE 125
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGAID+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK++G S
Sbjct: 126 QALEICDALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGIIS 185
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +F+NQIR K+GV +GNPE T+GG ALKF+++VR+++R +KS G++ +G R
Sbjct: 186 KSRTATVFINQIREKVGVMFGNPETTTGGRALKFYSTVRMDVRRIESLKS--GNDIIGNR 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++GEG+S GC++D + +IV + GAWYSYGD+R+GQG
Sbjct: 244 TRVKVVKNKVAPPFKQAEFDIMYGEGISHEGCLVDLGVLYNIVGKSGAWYSYGDERIGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ ++L+++P + EIE +R
Sbjct: 304 RENTKEFLKNHPEMAFEIENRIR 326
>gi|291548053|emb|CBL21161.1| protein RecA [Ruminococcus sp. SR1/5]
Length = 350
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 252/323 (78%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++Q+AL+AA+ +I FGKGSV +LG + + VE P+GCL+LD+ALG GG+PKGRIVE
Sbjct: 5 EKQKALEAALGNIEKQFGKGSVMKLGDSSSHMQVEAVPTGCLSLDIALGVGGVPKGRIVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K++GVD++NL + QPDNGE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKSIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEIEG++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R +K +G E VG
Sbjct: 185 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASVRMDVRRVETLK--QGGEMVGNH 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I+FG G+S+ G +LD A IV + GAWY+Y ++GQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDIMFGTGISREGDILDLAAECSIVNKSGAWYAYEGDKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +LR++P +++EIEK VR
Sbjct: 303 RENAKLFLREHPEIRDEIEKKVR 325
>gi|310641627|ref|YP_003946385.1| reca/rada recombinase (multifunctional sos repair regulator)
[Paenibacillus polymyxa SC2]
gi|309246577|gb|ADO56144.1| RecA/RadA recombinase (Multifunctional SOS repair regulator)
[Paenibacillus polymyxa SC2]
Length = 370
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 256/347 (73%), Gaps = 13/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I FGKGS+ +LG + VET PSG + LD+ALG GG P+GRI+E+
Sbjct: 20 DRRAALDMALRQIEKQFGKGSIMKLGESTHMQVETIPSGSIALDIALGTGGFPRGRIIEV 79
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 80 YGPESSGKTTVALHAIAEVQKTGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQ 139
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 140 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 199
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +I+S+K G++ VG R
Sbjct: 200 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RIESLKMGNDIVGNR 256
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P++QAE +I++GEG+SK G ++D DIV + GAWYSY +RLGQG
Sbjct: 257 TRIKVVKNKVAPPFRQAEVDIMYGEGISKEGSLIDIGTEHDIVDKSGAWYSYEGERLGQG 316
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
R+ A Q+L++NP + IE+ +R + + ++ P +EE
Sbjct: 317 RENAKQFLKENPNIASTIEQKIRVA--------SNLITTIAPPTEEE 355
>gi|299769713|ref|YP_003731739.1| recombinase A [Acinetobacter oleivorans DR1]
gi|298699801|gb|ADI90366.1| recombinase A [Acinetobacter oleivorans DR1]
Length = 348
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 248/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+++A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFREAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++ +NP + EIE+ +R +
Sbjct: 302 NNVIRHFEENPQMAGEIERNIREQL 326
>gi|414084250|ref|YP_006992958.1| protein RecA [Carnobacterium maltaromaticum LMA28]
gi|412997834|emb|CCO11643.1| protein RecA [Carnobacterium maltaromaticum LMA28]
Length = 384
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/323 (57%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I +FGKGSV +LG V T PSG L LD+ALG GG PKGRI+E+
Sbjct: 4 DRKQALDAALKKIEKNFGKGSVMKLGEKIDTQVLTIPSGSLALDVALGVGGYPKGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHA+AEVQK GG A +DAEHA DP Y+ ALGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVSLHAVAEVQKQGGIAAFIDAEHALDPKYAAALGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + SGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 ALEIADALVSSGAIDIVVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPEVT GG ALKF+A+VRLE+R +IK+ G + VG R
Sbjct: 184 TKTIALFINQIREKVGVMFGNPEVTPGGRALKFYATVRLEVRRAEQIKN--GTDVVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+S++G +LD DIV + GAWYSY +R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGEGISQVGELLDMGSEKDIVNKSGAWYSYEGERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A +Y +NP L+ EIE+ VR+
Sbjct: 302 ENAKKYFMENPELRVEIEQKVRA 324
>gi|417877996|ref|ZP_12522634.1| recombinase A [Acinetobacter baumannii ABNIH3]
gi|342233972|gb|EGT98668.1| recombinase A [Acinetobacter baumannii ABNIH3]
Length = 349
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 253/335 (75%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRIKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVH 419
+ ++Y +N + EEIE+ +R + ++G+V
Sbjct: 302 NNVIRYFEENTQIAEEIERNIREQLLTTGTNGAVQ 336
>gi|420153910|ref|ZP_14660842.1| RecA protein [Actinomyces massiliensis F0489]
gi|394756320|gb|EJF39421.1| RecA protein [Actinomyces massiliensis F0489]
Length = 400
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/328 (56%), Positives = 243/328 (74%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL A+ I+ SFGKGSV RLG V P+G LD+ALG GGLP+GRIVEI
Sbjct: 8 DRSKALATALAQIDKSFGKGSVMRLGDETRPPVAVIPTGSTALDVALGIGGLPRGRIVEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y+KALGVD +NL+V QPD GE
Sbjct: 68 YGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDNLLVSQPDTGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSG +D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 128 ALEITDMLIRSGGLDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR+++R +K GD+ VG R
Sbjct: 188 TGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRIDVRRAQTLKD--GDQPVGNRT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+ +V K+K++ P+KQAEF+I++G+G+S+ G +LD ++ + GAWY+YG +LGQG+
Sbjct: 246 KAKVVKNKMAPPFKQAEFDILYGQGISREGGLLDLGVDHGVIRKSGAWYTYGSDQLGQGK 305
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ A +L+DNP L +EIE + + + G
Sbjct: 306 ENARTFLKDNPELADEIENKILAALGVG 333
>gi|386714408|ref|YP_006180731.1| recombination protein RecA [Halobacillus halophilus DSM 2266]
gi|384073964|emb|CCG45457.1| recombination protein RecA [Halobacillus halophilus DSM 2266]
Length = 353
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 248/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD+A+ I FGKGS+ ++G V T PSG L LD+ALG GG P+GRIVEI
Sbjct: 3 DRKQALDSALRQIEKQFGKGSIMKMGDGSEQKVNTVPSGSLALDVALGVGGYPRGRIVEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE Q+ GG A +DAEHA DP Y++ LGVD+E L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEAQRKGGTAAFIDAEHALDPVYARRLGVDIEELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 123 ALEIAEALVRSGAVDMVVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAISK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K +G+E VG +
Sbjct: 183 SKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNEMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++GEG+S+ G +LD +D++ + G+WYSY +RLGQGR
Sbjct: 241 RLKVVKNKVAPPFKQAEVDIMYGEGISREGELLDIGTDLDLIQKSGSWYSYEGERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++N + EE+++++R
Sbjct: 301 ENAKQFLKENNHVYEEVKRIIR 322
>gi|16125339|ref|NP_419903.1| recombinase A [Caulobacter crescentus CB15]
gi|221234078|ref|YP_002516514.1| recombinase A [Caulobacter crescentus NA1000]
gi|20178056|sp|Q9A9A7.1|RECA_CAUCR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790426|sp|B8H3I7.1|RECA_CAUCN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|13422391|gb|AAK23071.1| recA protein [Caulobacter crescentus CB15]
gi|220963250|gb|ACL94606.1| RecA protein [Caulobacter crescentus NA1000]
Length = 356
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/322 (59%), Positives = 254/322 (78%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+QRAL+AA+ I+ +FGKGSV +LG G +E+ +G L LD+ALG GGLPKGRIVE+
Sbjct: 16 DKQRALEAALAQIDRAFGKGSVMKLGEKGKVEIESVSTGSLGLDIALGIGGLPKGRIVEV 75
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH +AEVQK GG A VDAEHA DPSY+ LGV+++NL+V QPDNGE
Sbjct: 76 YGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPDNGEQ 135
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ VDSV+ALTP+AEIEGE+G GLQARLMSQALRK++ + +K
Sbjct: 136 ALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTASINK 195
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
A +IF+NQIR+KIGV YG+PE T+GG ALKF+ASVRL+IR TG +K+ DE VG V
Sbjct: 196 ANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGSVKAR--DEIVGNNV 253
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++ EF+I++GEG+SKLG ++D I+ + G+W+SYG QR+GQGR
Sbjct: 254 RVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAGSWFSYGSQRIGQGR 313
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
D ++L++NP + +IEK VR
Sbjct: 314 DNVREFLKNNPDVAADIEKAVR 335
>gi|421850101|ref|ZP_16283069.1| DNA recombinase RecA [Acetobacter pasteurianus NBRC 101655]
gi|371459097|dbj|GAB28272.1| DNA recombinase RecA [Acetobacter pasteurianus NBRC 101655]
Length = 344
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A+ I +FGKGSV RLG + P+G L LD+ALG GGLP+GR+VE
Sbjct: 4 MDKAKALEGALGQIERAFGKGSVMRLGQRPKVEADVIPTGSLGLDIALGIGGLPRGRVVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG +DAEHA DPSY+K LGVDV+NL++ QPD GE
Sbjct: 64 IYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPSYAKKLGVDVDNLLISQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G +
Sbjct: 124 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVA 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IFLNQIR KIGV +GNPE T+GG ALKF++SVR++IR G IK DE G +
Sbjct: 184 RSNTLMIFLNQIRLKIGVMFGNPETTTGGNALKFYSSVRMDIRRIGSIKD--KDEVTGNQ 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D +V + GAW+SY QR+GQG
Sbjct: 242 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGAWFSYDSQRIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+LRD+P + +IE+ VR
Sbjct: 302 RENAKQFLRDHPEMAADIERRVR 324
>gi|158424479|ref|YP_001525771.1| recombinase A [Azorhizobium caulinodans ORS 571]
gi|158331368|dbj|BAF88853.1| RecA protein [Azorhizobium caulinodans ORS 571]
Length = 363
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/324 (58%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I FGKGS+ RLG +G + VE+ SG L LD+ALG GGLPKGRIV
Sbjct: 14 MDKTKALDAALSQIERHFGKGSIMRLGKSGKVMEVESISSGSLGLDIALGIGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG +DAEHA DP Y++ LGV++++L++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+ALTPRAE++GE+G Q G+QARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDNQPGMQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGMIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELLDLGVRAGVVEKSGAWFSYDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR NP + IE +R
Sbjct: 312 GRENAKTFLRQNPEVAGRIEATIR 335
>gi|409199017|ref|ZP_11227680.1| recombinase A [Marinilabilia salmonicolor JCM 21150]
Length = 348
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/327 (55%), Positives = 255/327 (77%), Gaps = 3/327 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL M+ I+ ++GKG++ R+G + V +F SG + LD ALG GG P+GR++EI
Sbjct: 21 EKLKALQLTMDKIDKTYGKGAIMRMGESVAENVPSFSSGSIGLDRALGVGGFPRGRVIEI 80
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA+HA+AEVQKLGG A ++DAEHAFD Y++ LGVDVENL++ QPDNGE
Sbjct: 81 YGPESSGKTTLAIHAMAEVQKLGGIAAIIDAEHAFDRFYAEKLGVDVENLLISQPDNGEQ 140
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD++ RS AIDL+ VDSV+ALTP+AEIEGE+G ++GLQARLMSQALRK++ N SK
Sbjct: 141 ALEIADQLIRSSAIDLVVVDSVAALTPKAEIEGEMGENKVGLQARLMSQALRKLTSNISK 200
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQ+R KIGV +GNPE T+GG ALKF++SVRL+IR ++K+ GDE VG
Sbjct: 201 TNTCCIFINQLREKIGVMFGNPETTTGGNALKFYSSVRLDIRRVNQLKN--GDEVVGNHT 258
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF+I++GEG+SK+G ++D +++ + G+W+SYGD +LGQGR
Sbjct: 259 RVKVVKNKVAPPFRKAEFDIMYGEGISKIGEIIDIGVEHNVIKKSGSWFSYGDAKLGQGR 318
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSD 415
+ +RDNP L EE+E+ + + +++
Sbjct: 319 EAVKDVIRDNPELAEELEQKIVAALAE 345
>gi|390453996|ref|ZP_10239524.1| recombinase A [Paenibacillus peoriae KCTC 3763]
Length = 353
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 256/347 (73%), Gaps = 13/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I FGKGS+ +LG + VET PSG + LD+ALG GG P+GRI+E+
Sbjct: 3 DRRAALDMALRQIEKQFGKGSIMKLGESTHMQVETIPSGSIALDIALGTGGFPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKTGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +I+S+K G++ VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RIESLKMGNDIVGNR 239
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P++QAE +I++GEG+SK G ++D DIV + GAWYSY +RLGQG
Sbjct: 240 TRIKVVKNKVAPPFRQAEVDIMYGEGISKEGSLIDIGTEHDIVDKSGAWYSYEGERLGQG 299
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
R+ A Q+L++NP + IE+ +R + + V+ P +EE
Sbjct: 300 RENAKQFLKENPNIASTIEQKIRVA--------SNLITTVAPPTEEE 338
>gi|308068729|ref|YP_003870334.1| recombinase A [Paenibacillus polymyxa E681]
gi|305858008|gb|ADM69796.1| RecA protein (Recombinase A) [Paenibacillus polymyxa E681]
Length = 359
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 256/347 (73%), Gaps = 13/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I FGKGS+ +LG + VET PSG + LD+ALG GG P+GR++EI
Sbjct: 9 DRRAALDMALRQIEKQFGKGSIMKLGESTHMQVETIPSGSIALDIALGTGGFPRGRVIEI 68
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 69 YGPESSGKTTVALHAIAEVQKTGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQ 128
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 129 ALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 188
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +I+S+K G++ VG R
Sbjct: 189 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RIESLKMGNDIVGNR 245
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P++QAE +I++GEG+SK G ++D DIV + GAWYSY +RLGQG
Sbjct: 246 TRIKVVKNKVAPPFRQAEVDIMYGEGISKEGSLIDIGTEHDIVDKSGAWYSYEGERLGQG 305
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
R+ A Q+L++NP + IE+ +R + + V+ P +EE
Sbjct: 306 RENAKQFLKENPNIASTIEQKIRVA--------SNLITTVAPPTEEE 344
>gi|386040652|ref|YP_005959606.1| protein recA Recombinase A [Paenibacillus polymyxa M1]
gi|343096690|emb|CCC84899.1| protein recA Recombinase A [Paenibacillus polymyxa M1]
Length = 359
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 256/347 (73%), Gaps = 13/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I FGKGS+ +LG + VET PSG + LD+ALG GG P+GRI+E+
Sbjct: 9 DRRAALDMALRQIEKQFGKGSIMKLGESTHMQVETIPSGSIALDIALGTGGFPRGRIIEV 68
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 69 YGPESSGKTTVALHAIAEVQKTGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQ 128
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 129 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 188
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +I+S+K G++ VG R
Sbjct: 189 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RIESLKMGNDIVGNR 245
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P++QAE +I++GEG+SK G ++D DIV + GAWYSY +RLGQG
Sbjct: 246 TRIKVVKNKVAPPFRQAEVDIMYGEGISKEGSLIDIGTEHDIVDKSGAWYSYEGERLGQG 305
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
R+ A Q+L++NP + IE+ +R + + ++ P +EE
Sbjct: 306 RENAKQFLKENPNIASTIEQKIRVA--------SNLITTIAPPTEEE 344
>gi|227824639|ref|ZP_03989471.1| recA protein [Acidaminococcus sp. D21]
gi|226905138|gb|EEH91056.1| recA protein [Acidaminococcus sp. D21]
Length = 352
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/323 (55%), Positives = 252/323 (78%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I FGKGS+ +LG+A + +ET P+G L+LD+ALG GG+P+GRI+E
Sbjct: 4 EKGKALDAAVKQIEKDFGKGSIMKLGAASAKMNIETIPTGALSLDIALGVGGIPRGRIIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAE QK GG A +DAEHA DP Y++ LGVD++NL++ QPD GE
Sbjct: 64 IYGPESSGKTTVALHMIAEAQKRGGYAAFIDAEHALDPEYARHLGVDIDNLLISQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGAID+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK++G S
Sbjct: 124 QALEICDALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGIIS 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +F+NQIR K+GV +GNPE T+GG ALKF+++VR+++R +KS G++ +G R
Sbjct: 184 KSRTATVFINQIREKVGVMFGNPETTTGGRALKFYSTVRMDVRRIESLKS--GNDIIGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++GEG+S GC++D + +IV + GAWYSYGD+R+GQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDIMYGEGISHEGCLVDLGVLYNIVGKSGAWYSYGDERIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ ++L+++P + EIE +R
Sbjct: 302 RENTKEFLKNHPEMAFEIENRIR 324
>gi|415975305|ref|ZP_11558834.1| recombinase A [Acidithiobacillus sp. GGI-221]
gi|339833935|gb|EGQ61735.1| recombinase A [Acidithiobacillus sp. GGI-221]
Length = 357
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/357 (54%), Positives = 254/357 (71%), Gaps = 9/357 (2%)
Query: 78 GFSSDSGDSRFLDRQR--ALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDL 134
G+ S +D QR AL AA++ I+ FGKG+V RLG +E + +G L LDL
Sbjct: 2 GYPSILEKENIMDEQRSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIEVYSTGSLGLDL 61
Query: 135 ALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGV 193
ALG GGLP+GR+VEI+GPESSGKTTL LHAIA Q GG A +DAEHA DP Y+ LGV
Sbjct: 62 ALGVGGLPRGRVVEIYGPESSGKTTLTLHAIASCQAAGGTAAFIDAEHALDPGYAHKLGV 121
Query: 194 DVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQAR 253
D+ENL++ QPD GE ALEIAD + RSGA+DLI +DSV+ALTP+AEIEG++G +GLQAR
Sbjct: 122 DLENLLISQPDTGEQALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQAR 181
Query: 254 LMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTG 313
LMSQALRK++ N S+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G
Sbjct: 182 LMSQALRKLTANISRTNTLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG 241
Query: 314 KIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRK 373
IK K DE VG RV+V K+KV+ P+++AEF I +GEG+S+L ++D DIV +
Sbjct: 242 AIK--KSDEVVGNDTRVKVVKNKVAPPFREAEFAIYYGEGISRLSELVDLGVKFDIVEKS 299
Query: 374 GAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLP 430
GAWYSY +R+GQG+D A QYL+++P L IE+ +R+ + H +F V+ P
Sbjct: 300 GAWYSYQGERIGQGKDNARQYLKEHPELAANIEQRIRAAAAG---HPLAFAEEVAEP 353
>gi|345019814|ref|ZP_08783427.1| recombinase A [Ornithinibacillus scapharcae TW25]
Length = 346
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 250/331 (75%), Gaps = 4/331 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I FGKGS+ +LG G +ET SG L LD+ALG GG PKGRI+EI
Sbjct: 3 DRKQALDMALKQIEKQFGKGSIMKLGENAGQKIETTSSGSLALDIALGIGGYPKGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE QK GG A +DAEHA DP+Y++ALGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPTYARALGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDVLVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQ+R KIGV +GNPE T GG ALKF++SVRLE+R +K +G+E +G R
Sbjct: 183 SKTTAIFINQVREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNEMIGNRA 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+S G +LD +DIV + GAWY+Y +RLGQGR
Sbjct: 241 KIKVVKNKVAPPFKTAEVDIMYGEGISIEGEILDIGSDLDIVQKSGAWYAYQGERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS-DGSV 418
+ A ++L++NP + E+ + +R DGSV
Sbjct: 301 ENAKEFLKENPEIMSEVHQAIRDHYGLDGSV 331
>gi|253573598|ref|ZP_04850941.1| recA protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251847126|gb|EES75131.1| recA protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 353
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VE PSG + LD+ALG GGLP+GRI+E+
Sbjct: 3 DRKAALEMALRQIEKQFGKGSIMKLGESTHMQVEIVPSGSIALDIALGTGGLPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK+GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKIGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAISK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF++++RL++R IK G++ VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTIRLDVRRVETIK--MGNDMVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++GEG+SK G ++D +DIV + GAWYSY +RLGQGR
Sbjct: 241 RIKVVKNKVAPPFKQAEIDIMYGEGISKEGSIIDLGTELDIVDKSGAWYSYAGERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L+++P + IE+ +R
Sbjct: 301 ENAKQFLKEHPEIANAIEQKIR 322
>gi|346226241|ref|ZP_08847383.1| recombinase A [Anaerophaga thermohalophila DSM 12881]
Length = 350
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/321 (57%), Positives = 250/321 (77%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL M+ I+ ++GKG++ R+G + V +F SG + LD ALG GG P+GR++EI
Sbjct: 22 EKLKALQLTMDKIDKTYGKGAIMRMGESVAENVPSFSSGSIGLDRALGVGGYPRGRVIEI 81
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA+HA+AEVQKLGG A ++DAEHAFD Y++ LGVDVENL++ QPDNGE
Sbjct: 82 YGPESSGKTTLAIHAMAEVQKLGGIAAIIDAEHAFDRFYAEKLGVDVENLLISQPDNGEQ 141
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD++ RS AIDL+ VDSV+ALTP+AEIEGE+G ++GLQARLMSQALRK++ N SK
Sbjct: 142 ALEIADQLIRSSAIDLVVVDSVAALTPKAEIEGEMGDNKMGLQARLMSQALRKLTSNISK 201
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR +IK+ GDE VG
Sbjct: 202 TNTCCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRVTQIKN--GDEVVGNHT 259
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF+I++GEG+SK+G ++D I+ + G+W+SYGD +LGQGR
Sbjct: 260 RVKVVKNKVAPPFRKAEFDIMYGEGISKIGEIIDLGVEHGIIKKSGSWFSYGDTKLGQGR 319
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
+ +RDNP L EE+EK +
Sbjct: 320 EAVKDVIRDNPELAEELEKKI 340
>gi|421653964|ref|ZP_16094295.1| RecA protein [Acinetobacter baumannii Naval-72]
gi|408511814|gb|EKK13461.1| RecA protein [Acinetobacter baumannii Naval-72]
Length = 349
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 253/335 (75%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVH 419
+ ++Y +N + EEIE+ +R + ++G+V
Sbjct: 302 NNVIRYFEENTPIAEEIERNIREQLLTTGTNGAVQ 336
>gi|240145640|ref|ZP_04744241.1| protein RecA [Roseburia intestinalis L1-82]
gi|257202261|gb|EEV00546.1| protein RecA [Roseburia intestinalis L1-82]
gi|291536384|emb|CBL09496.1| protein RecA [Roseburia intestinalis M50/1]
gi|291538746|emb|CBL11857.1| protein RecA [Roseburia intestinalis XB6B4]
Length = 387
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/327 (55%), Positives = 254/327 (77%), Gaps = 4/327 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA++ I +GKGS+ +LG + VET P+G L+LD+ALG GGLPKGRI+E
Sbjct: 16 DKLKALDAAISQIEKQYGKGSIMKLGDNSAHMNVETIPTGSLSLDIALGLGGLPKGRIIE 75
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHA+AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPD GE
Sbjct: 76 IYGPESSGKTTVALHAVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDCGE 135
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 136 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTSVIS 195
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF++SVR+++R +K +G E VG R
Sbjct: 196 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRMDVRRIEALK--QGGEVVGNR 253
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P+++AEF+I+FG+G+S+ G +LD A +V + GAWY+Y ++GQG
Sbjct: 254 TRVKIVKNKVAPPFREAEFDIMFGQGISREGDILDLAADKGVVNKSGAWYAYNGDKIGQG 313
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMS 414
R+ A QYL++NPL+ EEIE VR M++
Sbjct: 314 RENAKQYLKENPLICEEIEAKVREMLN 340
>gi|403675541|ref|ZP_10937703.1| recombinase A [Acinetobacter sp. NCTC 10304]
gi|417545549|ref|ZP_12196635.1| RecA protein [Acinetobacter baumannii OIFC032]
gi|421667199|ref|ZP_16107274.1| RecA protein [Acinetobacter baumannii OIFC087]
gi|421669367|ref|ZP_16109391.1| RecA protein [Acinetobacter baumannii OIFC099]
gi|421808262|ref|ZP_16244113.1| RecA protein [Acinetobacter baumannii OIFC035]
gi|400383437|gb|EJP42115.1| RecA protein [Acinetobacter baumannii OIFC032]
gi|410385545|gb|EKP38036.1| RecA protein [Acinetobacter baumannii OIFC087]
gi|410388759|gb|EKP41187.1| RecA protein [Acinetobacter baumannii OIFC099]
gi|410415842|gb|EKP67623.1| RecA protein [Acinetobacter baumannii OIFC035]
Length = 349
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 253/335 (75%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVH 419
+ ++Y +N + EEIE+ +R + ++G+V
Sbjct: 302 NNVIRYFEENNQIAEEIERNIREQLLTTGTNGAVQ 336
>gi|15614946|ref|NP_243249.1| recombinase A [Bacillus halodurans C-125]
gi|11387031|sp|Q9KAA7.1|RECA_BACHD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|10175003|dbj|BAB06102.1| multifunctional protein involved in homologous recombination
[Bacillus halodurans C-125]
Length = 349
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/347 (54%), Positives = 254/347 (73%), Gaps = 11/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I FGKGS+ +LG V T SG L LD+ALG GG P+GR++E+
Sbjct: 3 DRKAALDMALRQIEKQFGKGSIMKLGEQAEQRVSTISSGALALDIALGVGGYPRGRVIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y+K LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQRNGGQAAFIDAEHALDPVYAKKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAIDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K +G++ VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNDMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+KQAE +I++GEG+S+ G +LD A +DIV + GAWYS+ D+RLGQGR
Sbjct: 241 KIKVVKNKVAPPFKQAEVDIMYGEGISREGSILDIASELDIVQKSGAWYSFNDERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS-DGSVHQGSFLRNVSLPNQEE 434
+ A Q+L++NP EEIE +R +G + V P++EE
Sbjct: 301 ENAKQFLKENPEAAEEIESRIREHYGLNGEIE-------VEAPSEEE 340
>gi|302385103|ref|YP_003820925.1| recA protein [Clostridium saccharolyticum WM1]
gi|302195731|gb|ADL03302.1| recA protein [Clostridium saccharolyticum WM1]
Length = 363
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 256/324 (79%), Gaps = 6/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ I ++GKGSV +LG +G + VET P+G L+LD+ALG GG+PKGR+VE
Sbjct: 5 DKLKALDAALTQIEKAYGKGSVMKLGDSGTNMNVETVPTGALSLDIALGLGGIPKGRVVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAEVQK GG A +DAEHA DP Y+K++GVD++NL + QPDNGE
Sbjct: 65 IYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPVYAKSIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEIEG++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTAIIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
K+ C ++F+NQ+R K+GV +G+PE T+GG ALKF+ASVRL+IR KI+++K G + VG
Sbjct: 185 KSNCIVLFINQLREKVGVMFGSPETTTGGRALKFYASVRLDIR---KIETLKQGGDMVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
RVRV+V K+K++ P+K+AEF+I+FG+G+SK G +LD A +IV + GAW++Y + ++GQ
Sbjct: 242 RVRVKVVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAVKENIVEKSGAWFAYNNIKIGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A YL+DNP EIE VR
Sbjct: 302 GRENAKTYLQDNPAACMEIENKVR 325
>gi|302389774|ref|YP_003825595.1| recombinase A [Thermosediminibacter oceani DSM 16646]
gi|302200402|gb|ADL07972.1| RecA protein [Thermosediminibacter oceani DSM 16646]
Length = 343
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRI 145
+++Q+AL+ A+ I FGKGS+ RLG A VE P+G L LD+ALG GG+P+GRI
Sbjct: 1 MMEKQKALEMALAQIERQFGKGSIMRLGEAESKFNVEVIPTGALPLDIALGVGGVPRGRI 60
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
+EIFGPESSGKTT+ALH +AE QK GG A +DAEHA DP+Y++ LGVD +NL++ QPD
Sbjct: 61 IEIFGPESSGKTTVALHIVAEAQKAGGTAAFIDAEHALDPTYARKLGVDTDNLLISQPDT 120
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIA+ + RSGA+D+I +DSV+AL P+AE+EGE+G +GLQARLMSQALRK++G+
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPKAELEGEMGEAHVGLQARLMSQALRKLAGS 180
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
SK+ IF+NQ+R K+GV +GNPE T GG ALKF+ASVR+E+R T IK G+ VG
Sbjct: 181 ISKSKTVAIFINQLREKVGVMFGNPETTPGGRALKFYASVRMEVRKTSVIKD--GENVVG 238
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
R V+V K+KV+ P+K AEF+I++GEG+S+ GC+LD A I+ + GAWYSY +R+G
Sbjct: 239 TRASVKVVKNKVAPPFKSAEFDIMYGEGISREGCVLDFATEAGIIQKSGAWYSYEKERIG 298
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVR 410
QGR+ A QYL+++P + + IE V+
Sbjct: 299 QGRENAKQYLKEHPEVLKAIELKVK 323
>gi|424742868|ref|ZP_18171188.1| RecA protein [Acinetobacter baumannii WC-141]
gi|422943831|gb|EKU38842.1| RecA protein [Acinetobacter baumannii WC-141]
Length = 348
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 248/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID+I VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+++A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFREAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++ +NP + EIE+ +R +
Sbjct: 302 NNVIRHFEENPQMAGEIERNIREQL 326
>gi|445445406|ref|ZP_21443105.1| RecA protein [Acinetobacter baumannii WC-A-92]
gi|444761225|gb|ELW85639.1| RecA protein [Acinetobacter baumannii WC-A-92]
Length = 349
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 253/335 (75%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCGFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVH 419
+ ++Y +N + EEIE+ +R + ++G+V
Sbjct: 302 NNVIRYFEENTQIAEEIERNIREQLLTTGTNGAVQ 336
>gi|258541148|ref|YP_003186581.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01]
gi|384041069|ref|YP_005479813.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-12]
gi|384049584|ref|YP_005476647.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-03]
gi|384052694|ref|YP_005485788.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-07]
gi|384055926|ref|YP_005488593.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-22]
gi|384058567|ref|YP_005497695.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-26]
gi|384061861|ref|YP_005482503.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-32]
gi|384117937|ref|YP_005500561.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632226|dbj|BAH98201.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01]
gi|256635283|dbj|BAI01252.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-03]
gi|256638338|dbj|BAI04300.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-07]
gi|256641392|dbj|BAI07347.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-22]
gi|256644447|dbj|BAI10395.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-26]
gi|256647502|dbj|BAI13443.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-32]
gi|256650555|dbj|BAI16489.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653546|dbj|BAI19473.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-12]
Length = 398
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A+ I +FGKGSV RLG + P+G L LD+ALG GGLP+GR+VE
Sbjct: 58 MDKAKALEGALGQIERAFGKGSVMRLGQRPKVEADVIPTGSLGLDIALGIGGLPRGRVVE 117
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG +DAEHA DPSY+K LGVDV+NL++ QPD GE
Sbjct: 118 IYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPSYAKKLGVDVDNLLISQPDTGE 177
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G +
Sbjct: 178 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVA 237
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IFLNQIR KIGV +GNPE T+GG ALKF++SVR++IR G IK DE G +
Sbjct: 238 RSNTLMIFLNQIRLKIGVMFGNPETTTGGNALKFYSSVRMDIRRIGSIKD--KDEVTGNQ 295
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D +V + GAW+SY QR+GQG
Sbjct: 296 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGAWFSYDSQRIGQG 355
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+LRD+P + +IE+ VR
Sbjct: 356 RENAKQFLRDHPEMAADIERRVR 378
>gi|328543179|ref|YP_004303288.1| recombinase A [Polymorphum gilvum SL003B-26A1]
gi|326412925|gb|ADZ69988.1| recombinase A [Polymorphum gilvum SL003B-26A1]
Length = 344
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/334 (56%), Positives = 254/334 (76%), Gaps = 6/334 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +ALDAA++ I +FGKGS+ RLG V+T +G L LD+ALG GGLP+GRIVE
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGQGQAVEVQTVSTGSLGLDIALGVGGLPRGRIVE 60
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH IAE QKLGG +DAEHA DP Y++ LGV++++L++ QPD GE
Sbjct: 61 IYGPESSGKTTLALHTIAEAQKLGGICAFIDAEHALDPVYARKLGVNIDDLLISQPDAGE 120
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAI+++ +DSV+ALTP+AE+EGE+G G+QARLMSQALRK++ + S
Sbjct: 121 QALEIADTLVRSGAIEVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASIS 180
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE +G +
Sbjct: 181 KSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKDR--DEVIGNQ 238
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF++I+GEGVSK+G ++D IV + GAW+SY QRLGQG
Sbjct: 239 TRVKVVKNKLAPPFRQVEFDVIYGEGVSKMGELVDLGVKAGIVEKSGAWFSYNSQRLGQG 298
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS---MMSDGSV 418
R+ A Q+LR+NP + EIE +R ++SD +
Sbjct: 299 RENAKQFLRENPEIAAEIELAIRQNAGLLSDAII 332
>gi|300023634|ref|YP_003756245.1| recA protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525455|gb|ADJ23924.1| recA protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 377
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 249/324 (76%), Gaps = 3/324 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+++AL+ A+ I+ +FGKGS+ RLG+ +E P+G L LD+ALG GGLPKGRI+E
Sbjct: 14 MDKKQALEHALQQIDKNFGKGSIMRLGANDKVDIEAIPTGSLGLDIALGIGGLPKGRIIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH +AE QK GG +DAEHA DP Y+K LGV +E+L++ QPD GE
Sbjct: 74 IYGPESSGKTTLALHVVAEAQKRGGICAFIDAEHAIDPGYAKKLGVKIEDLLISQPDTGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ VDSV+ALTP+AE+EGE+G GLQARLMSQALRK++G+ S
Sbjct: 134 QALEIADTLVRSGAVDVLVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTGSIS 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C ++F+NQIR KIG+ +GNPE T+GG ALKF+ASVRL+IR G+IK + +E VG +
Sbjct: 194 KSKCMVVFINQIRMKIGIMFGNPETTTGGNALKFYASVRLDIRRIGQIK--EREETVGNQ 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+SK+G ++D IV + GAW SY R+GQG
Sbjct: 252 TRVKVVKNKVAPPFKQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWMSYNGDRIGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL++NP + EIE +R+
Sbjct: 312 RENAKTYLKENPKIAAEIENSIRA 335
>gi|335424601|ref|ZP_08553609.1| recombinase A [Salinisphaera shabanensis E1L3A]
gi|334888939|gb|EGM27234.1| recombinase A [Salinisphaera shabanensis E1L3A]
Length = 361
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 248/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL AA++ I FGKGSV R+G + + + SG LTLD+ALG GG P+GR++EI
Sbjct: 4 DRKKALAAALSQIERQFGKGSVMRMGDQDTSNIPSISSGSLTLDIALGIGGYPRGRVIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L AIAE QK GG A +DAEHA DP+Y++ALGVD+ENL++ QPD GE
Sbjct: 64 YGPESSGKTTLTLQAIAECQKAGGTAAFIDAEHALDPTYAEALGVDIENLLISQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RS A+D++ +DSV+ALTP+AEIEGE+G +GLQARLMSQALRK++ N +
Sbjct: 124 ALEIADMLVRSAAVDIVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T++F+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 184 TGTTVMFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIK--KGDEVIGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+++AEFEI++GEG S+ G ++D +++ + G+WYSY R+GQG+
Sbjct: 242 RVKVVKNKMAPPFRKAEFEILYGEGSSREGEIIDLGVANNLIEKAGSWYSYNGDRVGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
D A +L+DNP + +++E +R +
Sbjct: 302 DNARNFLKDNPEIAQQLEDSLREKL 326
>gi|325293276|ref|YP_004279140.1| recombinase A [Agrobacterium sp. H13-3]
gi|418408608|ref|ZP_12981924.1| recombinase A [Agrobacterium tumefaciens 5A]
gi|325061129|gb|ADY64820.1| recombinase A [Agrobacterium sp. H13-3]
gi|358005522|gb|EHJ97848.1| recombinase A [Agrobacterium tumefaciens 5A]
gi|444299298|emb|CCP29598.1| recombinase A [Agrobacterium genomosp. 1]
Length = 363
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 250/328 (76%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP + EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPEMASEIELALR 335
>gi|357007970|ref|ZP_09072969.1| recombinase A [Paenibacillus elgii B69]
Length = 350
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/322 (55%), Positives = 247/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VET PSG L LD+ALG GG P+GRI+E+
Sbjct: 3 DRRAALENALRQIEKQFGKGSIMKLGESTHMQVETIPSGSLALDIALGIGGFPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y+ LG++++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQRAGGTAAFIDAEHALDPLYASKLGINIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF++SVRL++R IK +G++ VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRRVETIK--QGNDMVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQA+ +I++GEG+S+ G ++D A MD++ + GAWYSY + RLGQGR
Sbjct: 241 RIKVVKNKVAPPFKQADIDIMYGEGISREGSIVDIATEMDVIQKSGAWYSYNNDRLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++NP + + IEK +R
Sbjct: 301 ENAKQFLKENPHIADVIEKKIR 322
>gi|406942572|gb|EKD74773.1| hypothetical protein ACD_44C00335G0003 [uncultured bacterium]
Length = 350
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 243/324 (75%), Gaps = 2/324 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R++ALDAA++ I FGKGSV RLG + VET +G L LD ALGGGLP+GR+VEI+
Sbjct: 4 NRKKALDAAISQIEKQFGKGSVMRLGDSAAVKVETISTGSLALDAALGGGLPRGRVVEIY 63
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL L IAE QK GG A +DAEHA DP Y++ LGV+V +L++ QPD GE A
Sbjct: 64 GPESSGKTTLTLQVIAECQKKGGAAAFIDAEHALDPIYAEKLGVNVSDLLISQPDTGEQA 123
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D + RSG +D++ +DSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GN ++
Sbjct: 124 LEITDMLVRSGGVDIVVIDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGNIKRS 183
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
++F+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK KG+E +G R
Sbjct: 184 NTLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRVGAIK--KGEEVIGSETR 241
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++QA FEI++GEG+S+ G ++D IV + GAWYS+G +R+GQG+D
Sbjct: 242 VKVVKNKVAPPFRQAMFEILYGEGISREGEIIDLGVEHGIVEKSGAWYSFGKERIGQGKD 301
Query: 390 KALQYLRDNPLLQEEIEKVVRSMM 413
YL++NP + + IE +R +
Sbjct: 302 NTRAYLKENPKIAKVIEDKIREKL 325
>gi|262376180|ref|ZP_06069410.1| recA protein [Acinetobacter lwoffii SH145]
gi|262308781|gb|EEY89914.1| recA protein [Acinetobacter lwoffii SH145]
Length = 347
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 250/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIAE QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID+I VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K+A F+I++G+GV+ LG ++D A +IV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFKEALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ ++YL ++ + + IEK++R +
Sbjct: 302 NNTIRYLEEHKEMAQTIEKLIRDQL 326
>gi|262279350|ref|ZP_06057135.1| DNA strand exchange and recombination protein RecA [Acinetobacter
calcoaceticus RUH2202]
gi|262259701|gb|EEY78434.1| DNA strand exchange and recombination protein RecA [Acinetobacter
calcoaceticus RUH2202]
Length = 348
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 248/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID+I VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+++A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFREALFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++ +NP + EIE+ +R +
Sbjct: 302 NNVIRHFEENPQMAGEIERNIREQL 326
>gi|198283178|ref|YP_002219499.1| recA protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665991|ref|YP_002425407.1| recA protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|226723623|sp|B5EQ47.1|RECA_ACIF5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226737749|sp|B7J7A9.1|RECA_ACIF2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|198247699|gb|ACH83292.1| recA protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518204|gb|ACK78790.1| recA protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 345
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/342 (56%), Positives = 249/342 (72%), Gaps = 7/342 (2%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
R +AL AA++ I+ FGKG+V RLG +E + +G L LDLALG GGLP+GR+VEI
Sbjct: 5 RSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIEVYSTGSLGLDLALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHAIA Q GG A +DAEHA DP Y+ LGVD+ENL++ QPD GE
Sbjct: 65 YGPESSGKTTLTLHAIASCQAAGGTAAFIDAEHALDPGYAHKLGVDLENLLISQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+DLI +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N S+
Sbjct: 125 ALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANISR 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK K DE VG
Sbjct: 185 TNTLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--KSDEVVGNDT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF I +GEG+S+L ++D DIV + GAWYSY +R+GQG+
Sbjct: 243 RVKVVKNKVAPPFREAEFAIYYGEGISRLSELVDLGVKFDIVEKSGAWYSYQGERIGQGK 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLP 430
D A QYL+++P L IE+ +R+ + H +F V+ P
Sbjct: 303 DNARQYLKEHPELAANIEQRIRAAAAG---HPLAFAEEVAEP 341
>gi|375308299|ref|ZP_09773585.1| Recombinase A [Paenibacillus sp. Aloe-11]
gi|375079723|gb|EHS57945.1| Recombinase A [Paenibacillus sp. Aloe-11]
Length = 353
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 256/347 (73%), Gaps = 13/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I FGKGS+ +LG + VET PSG + LD+ALG GG P+GRI+E+
Sbjct: 3 DRRAALDMALRQIEKQFGKGSIMKLGESTHMQVETIPSGSIALDIALGTGGFPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKTGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +++S+K G++ VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RVESLKMGNDIVGNR 239
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P++QAE +I++GEG+SK G ++D DIV + GAWYSY +RLGQG
Sbjct: 240 TRIKVVKNKVAPPFRQAEVDIMYGEGISKEGSLIDIGTEHDIVDKSGAWYSYEGERLGQG 299
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
R+ A Q+L++NP + IE+ +R + + V+ P +EE
Sbjct: 300 RENAKQFLKENPNIASTIEQKIRLA--------SNLITTVAPPTEEE 338
>gi|384261788|ref|YP_005416974.1| protein recA [Rhodospirillum photometricum DSM 122]
gi|378402888|emb|CCG08004.1| Protein recA [Rhodospirillum photometricum DSM 122]
Length = 372
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/330 (56%), Positives = 252/330 (76%), Gaps = 6/330 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
D +D+Q+AL+AA+ I SFGKGS+ RLG + E+ +G L LD+ALG GGLP+
Sbjct: 24 DKDTMDKQKALEAAVGQIERSFGKGSIMRLGQRERVVETESISTGSLGLDIALGVGGLPR 83
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLA+H IAE QK GG+ VDAEHAFDP Y + LG++++ L++ Q
Sbjct: 84 GRIVEIYGPESSGKTTLAMHVIAEAQKKGGSCAFVDAEHAFDPLYGRKLGLNLDELLISQ 143
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEIAD + RSGAID++ VDSV+AL P+AE+EG++G +GLQARLMSQALRK+
Sbjct: 144 PDTGEQALEIADTLVRSGAIDVLVVDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKL 203
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G S++ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR +I +VK E
Sbjct: 204 TGTVSRSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIR---RIGAVKDKE 260
Query: 323 D-VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
D VG + RV+V K+KV+ P+K EF+I++GEGVSK+G +LD +++ + GAW+SY
Sbjct: 261 DIVGNQTRVKVVKNKVAPPFKVVEFDIMYGEGVSKMGEILDLGVKANLIEKSGAWFSYNS 320
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
R+GQGR+ A Q+LRDNP++ EEIE +R+
Sbjct: 321 TRIGQGRENAKQFLRDNPVMAEEIENAIRA 350
>gi|209542693|ref|YP_002274922.1| recA protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530370|gb|ACI50307.1| recA protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 350
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGSV RLG V+ +G L LD+ALG GGLP+GRIVE
Sbjct: 7 IDKSKALEGALSQIERAFGKGSVMRLGQRANEAVDVISTGSLGLDIALGIGGLPRGRIVE 66
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVDV+NL++ QPD GE
Sbjct: 67 IYGPESSGKTTLALHAIAEAQKKGGVCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGE 126
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G S
Sbjct: 127 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVS 186
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IFLNQIR KIGV +G+PE T+GG ALKF+ASVR++IR G+IK DE VG +
Sbjct: 187 RSNTMMIFLNQIRLKIGVMFGSPETTTGGNALKFYASVRMDIRRIGQIKD--KDEVVGNQ 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D IV + GAW+SY QR+GQG
Sbjct: 245 TRVKVVKNKMAPPFRQVEFDIVYGEGISKMGELIDLGVKAGIVEKSGAWFSYDSQRIGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + QYLR++P + +IE+ VR
Sbjct: 305 RENSKQYLREHPEMAADIERRVR 327
>gi|386830820|ref|YP_006237474.1| recombinase A [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|417797935|ref|ZP_12445121.1| RecA protein [Staphylococcus aureus subsp. aureus 21310]
gi|418655437|ref|ZP_13217297.1| RecA protein [Staphylococcus aureus subsp. aureus IS-105]
gi|334277057|gb|EGL95296.1| RecA protein [Staphylococcus aureus subsp. aureus 21310]
gi|375037153|gb|EHS30206.1| RecA protein [Staphylococcus aureus subsp. aureus IS-105]
gi|385196212|emb|CCG15833.1| recombinase A [Staphylococcus aureus subsp. aureus HO 5096 0412]
Length = 347
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 252/334 (75%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V T +G +TLD ALG GG PKGRI+EI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D DIV + GAWYSY +R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM--SDGSVHQ 420
+ YL++NP ++EEI++ +R + SDG V +
Sbjct: 302 ENVKMYLKENPQIKEEIDRKLREKLGISDGDVEE 335
>gi|427431120|ref|ZP_18920760.1| RecA protein [Caenispirillum salinarum AK4]
gi|425877952|gb|EKV26675.1| RecA protein [Caenispirillum salinarum AK4]
Length = 362
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+Q+ALDAA++ I +FGKGS+ RLG + VE +G L LDLALG GGLPKGRI+
Sbjct: 14 MDKQKALDAAVSQIERAFGKGSIMRLGQRETVIDVEAISTGSLGLDLALGIGGLPKGRII 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
E++GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGV+++ L++ QPD G
Sbjct: 74 EVYGPESSGKTTLALHVVAEAQKKGGACAFVDAEHALDPVYARKLGVNLDELLISQPDAG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ +DSV+AL PRAE+EGE+G +GLQARLMSQALRK++G+
Sbjct: 134 EQALEIADTLVRSGAVDVLVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTGSV 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IF+NQIR KIGV +GNPE T+GG ALKF++SVR+EIR G IK DE VG
Sbjct: 194 SRSKTMVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRMEIRRIGAIKDR--DEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+KV+ P+KQ EF+I++GEGVSK G +LD IV + G+W+SY R+GQ
Sbjct: 252 QTRVKVVKNKVAPPFKQVEFDIMYGEGVSKTGELLDLGVKAGIVEKSGSWFSYNSTRIGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A YL++NP EIEK +R+
Sbjct: 312 GRENAKNYLKENPETAAEIEKAIRT 336
>gi|341614587|ref|ZP_08701456.1| recombinase A [Citromicrobium sp. JLT1363]
Length = 353
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/328 (56%), Positives = 247/328 (75%), Gaps = 3/328 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+DRQ+ALDAA+ I+ +FGKGS +LGS VE +G L LD+ALG GGLPKGR++E
Sbjct: 15 VDRQKALDAALAQIDRAFGKGSAMKLGSKEAMNVEAISTGSLGLDIALGVGGLPKGRVIE 74
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGVD++ LIV QPD GE
Sbjct: 75 VYGPESSGKTTLALHVLAECQKAGGTVAFVDAEHALDPVYARKLGVDIDELIVSQPDTGE 134
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ +
Sbjct: 135 QALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSIN 194
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE +G
Sbjct: 195 RSKCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKD--RDEIIGNS 252
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++G+G+SK+G +LD IV + G+W+SY R+GQG
Sbjct: 253 TRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDLGVKAGIVEKSGSWFSYDSTRIGQG 312
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSD 415
R+ A +L++NP + +++E +R D
Sbjct: 313 RENAKTFLKENPEICDKLEAAIRGKTDD 340
>gi|260554248|ref|ZP_05826501.1| RecA/RadA recombinase [Acinetobacter sp. RUH2624]
gi|424055351|ref|ZP_17792874.1| protein recA [Acinetobacter nosocomialis Ab22222]
gi|425741964|ref|ZP_18860089.1| RecA protein [Acinetobacter baumannii WC-487]
gi|260404628|gb|EEW98145.1| RecA/RadA recombinase [Acinetobacter sp. RUH2624]
gi|407438546|gb|EKF45089.1| protein recA [Acinetobacter nosocomialis Ab22222]
gi|425489173|gb|EKU55486.1| RecA protein [Acinetobacter baumannii WC-487]
Length = 350
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 253/335 (75%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+++A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFREAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVH 419
+ ++Y +N + EEIE+ +R + ++G+V
Sbjct: 302 NNVIRYFEENKHIAEEIERNIREQLLTTGTNGTVQ 336
>gi|302670998|ref|YP_003830958.1| DNA recombination protein RecA [Butyrivibrio proteoclasticus B316]
gi|302395471|gb|ADL34376.1| DNA recombination protein RecA [Butyrivibrio proteoclasticus B316]
Length = 358
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 259/347 (74%), Gaps = 11/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+Q+AL+AA+ I FGKG+V +LG + + VET P+G L+LD+ALG GG+PKGRI+E
Sbjct: 5 DKQKALEAALGQIEKQFGKGAVMKLGDSSDTMNVETIPTGSLSLDIALGLGGIPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ LH IAEVQK GG A +DAEHA DP Y+K +GVDV+NL + QPD+GE
Sbjct: 65 IYGPESSGKTTVTLHMIAEVQKRGGIAGFIDAEHALDPVYAKNIGVDVDNLYISQPDSGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGAID++ VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAIDIVVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ CT++F+NQ+R K+GV +GNPE T+GG ALKF++SVR+++R IK + E +G R
Sbjct: 185 KSNCTVVFINQLREKVGVMFGNPETTTGGRALKFYSSVRMDVRRIEAIK--QNGEVIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+K+AEF+I+FG+G+S G +LD A +DIV + GAWY Y +++GQG
Sbjct: 243 TRVKVVKNKIAPPFKEAEFDIMFGKGISATGDILDLAAGVDIVNKSGAWYQYEGEKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
R+ A YL +NP + EI+ VR+ H G + V++P++ E
Sbjct: 303 RENAKLYLENNPAILAEIDAKVRA-------HYGLPVNGVTVPDKGE 342
>gi|445431866|ref|ZP_21438919.1| RecA protein [Acinetobacter baumannii OIFC021]
gi|444759249|gb|ELW83725.1| RecA protein [Acinetobacter baumannii OIFC021]
Length = 350
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 253/335 (75%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+++A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFREAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVH 419
+ ++Y +N + EEIE+ +R + ++G+V
Sbjct: 302 NNVIRYFEENKHIAEEIERNIREQLLTTGTNGAVQ 336
>gi|395765153|ref|ZP_10445769.1| protein recA [Bartonella sp. DB5-6]
gi|395413006|gb|EJF79485.1| protein recA [Bartonella sp. DB5-6]
Length = 347
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/349 (55%), Positives = 256/349 (73%), Gaps = 7/349 (2%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK+GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + +V + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGVVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
GR+ A Q+LRD+ + EIE +R + + L NV N E +
Sbjct: 299 GRENAKQFLRDHAEIATEIETALR---QNAGLIAIELLENVGAENIEND 344
>gi|284047740|ref|YP_003398079.1| recA protein [Acidaminococcus fermentans DSM 20731]
gi|283951961|gb|ADB46764.1| recA protein [Acidaminococcus fermentans DSM 20731]
Length = 362
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/324 (54%), Positives = 251/324 (77%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I FGKGS+ +LG+A + +ET P+G L+LD+ALG GG+P+GRI+E
Sbjct: 6 EKNKALDAALKQIEKDFGKGSIMKLGAASAKMNIETIPTGALSLDIALGVGGIPRGRIIE 65
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAE QK GG A +DAEHA DP Y++ LGVD++NL++ QPD GE
Sbjct: 66 IYGPESSGKTTVALHMIAEAQKRGGYAAFIDAEHALDPEYARHLGVDIDNLLISQPDTGE 125
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGAID+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK++G +
Sbjct: 126 QALEICDALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGVIA 185
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +F+NQIR K+GV +GNPEVT+GG ALKF++++R+++R +KS G++ +G
Sbjct: 186 KSRTATVFINQIREKVGVMFGNPEVTTGGRALKFYSTIRMDVRRVESLKS--GNDIIGNH 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++GEG+S GC++D +I+ + GAWYSYGDQR+GQG
Sbjct: 244 TRVKVVKNKVAPPFKQAEFDIMYGEGISHEGCLVDLGVQYNILNKSGAWYSYGDQRIGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ +L+++P + E+E +R+
Sbjct: 304 RENTKTFLKEHPDMAAEVEARIRA 327
>gi|397905630|ref|ZP_10506474.1| RecA protein [Caloramator australicus RC3]
gi|397161313|emb|CCJ33809.1| RecA protein [Caloramator australicus RC3]
Length = 344
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/322 (58%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+ A++ I FGKGSV +LG +E +G L LD+ALG GG+P+GRIVEI
Sbjct: 4 EKIKALELAISQIEKQFGKGSVMKLGENSKLNIEAISTGSLDLDIALGIGGVPRGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH IAE QKLGG A +DAEHA DP Y+K LGVD+ENLIV QPD GE
Sbjct: 64 FGPESSGKTTVALHIIAEAQKLGGAAAFIDAEHALDPVYAKKLGVDIENLIVAQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 124 ALEIAEALVRSGAIDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGAINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+GV +GNPE T GG ALKF+ASVRL++R IK +G++ G R
Sbjct: 184 SRCVAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRKVDGIK--QGEDITGSRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++GEG+S+ +LD DI+ + GAW+SY D +LGQGR
Sbjct: 242 RVKVVKNKVAPPFKQAEFDIMYGEGISRESNILDVGVNCDIIQKSGAWFSYKDIKLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL++NP L EIE +R
Sbjct: 302 ENAKQYLKENPNLALEIENKIR 323
>gi|312111602|ref|YP_003989918.1| recA protein [Geobacillus sp. Y4.1MC1]
gi|336235977|ref|YP_004588593.1| protein recA [Geobacillus thermoglucosidasius C56-YS93]
gi|423720522|ref|ZP_17694704.1| DNA recombination and repair protein (ATPase) recA [Geobacillus
thermoglucosidans TNO-09.020]
gi|311216703|gb|ADP75307.1| recA protein [Geobacillus sp. Y4.1MC1]
gi|335362832|gb|AEH48512.1| Protein recA [Geobacillus thermoglucosidasius C56-YS93]
gi|383366577|gb|EID43867.1| DNA recombination and repair protein (ATPase) recA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 350
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ AL+ A+ I FGKGS+ RLG + T SG L LD+ALG GG P+GRI+EI
Sbjct: 4 DRQAALEQALKQIERQFGKGSIMRLGEQTDRKISTVSSGSLALDIALGVGGYPRGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPIYAQKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 124 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF+ASVRLE+R +IK +G+E VG +
Sbjct: 184 SKAIAIFINQIREKVGVMFGNPETTPGGRALKFYASVRLEVRRAEQIK--QGNEMVGNKT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K A+ +I++GEG+S+ G ++D A +DIV + G+WYSY D+RLGQGR
Sbjct: 242 KIKVVKNKVAPPFKTADVDIMYGEGISREGEIIDMASELDIVQKSGSWYSYKDERLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++NP + EEI + +R
Sbjct: 302 ENAKQFLKENPHIAEEIAQEIR 323
>gi|336427079|ref|ZP_08607084.1| recA [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336010281|gb|EGN40267.1| recA [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 372
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 257/325 (79%), Gaps = 6/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA++ I FGKG+V +LG + VET P+G L+LD+ALG GG+PKGR++E
Sbjct: 5 EKLKALDAALSQIEKQFGKGAVMKLGDPSTQMNVETIPTGSLSLDIALGLGGIPKGRVIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ LH IAEVQK GG A +DAEHA DP Y+K +GVD++NL + QPDNGE
Sbjct: 65 IYGPESSGKTTVTLHMIAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGAID++ VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAIDIVVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
K+ CT+IF+NQ+R K+G+ +GNPE T+GG ALKF++++RL++R +I+S+K G E VG
Sbjct: 185 KSNCTVIFINQLREKVGIMFGNPETTTGGRALKFYSTIRLDVR---RIESLKQGGEVVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+K++ P+K+AEF+I+FGEG+S++G +LD A ++IV + GAW++Y ++GQ
Sbjct: 242 RTRVKVVKNKIAPPFKEAEFDIMFGEGISRVGDILDLATNLNIVNKSGAWFAYEGNKIGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A +L+DNP + +EIE+ VR+
Sbjct: 302 GRENAKTFLKDNPAVCDEIEQKVRA 326
>gi|452990331|emb|CCQ98553.1| multifunctional SOS repair factor [Clostridium ultunense Esp]
Length = 359
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 255/335 (76%), Gaps = 4/335 (1%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGA-LVETFPSGCLTLDLALG-GG 139
D G+ + DR+ AL+ A++ I FGKGS+ RLG A A V SG + LD+ALG GG
Sbjct: 3 DKGEMKVSDRKAALEKALSQIEKQFGKGSIMRLGEASQANQVSVVTSGSIALDVALGVGG 62
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
P+GRI+EI+GPESSGKTT+ALHAIAEVQ++GG A +DAEHA DP+Y++ LGV+++ L+
Sbjct: 63 YPRGRIIEIYGPESSGKTTVALHAIAEVQRIGGTAAFIDAEHALDPTYAEKLGVNIDELL 122
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
+ QPD GE ALEI + + RSGAID++ +DSV+AL P+AEI+GE+G +GLQARLMSQAL
Sbjct: 123 ISQPDTGEQALEICEALVRSGAIDIVVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQAL 182
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK+SG +K+ IF+NQ+R K+GV +GNPE T GG ALKF+AS+RL++R IK +
Sbjct: 183 RKLSGAINKSKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASIRLDVRRAESIK--Q 240
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
G++ VG R +++V K+KV+ P++ A+ +I+FGEG+SK G ++D A +DI+V+ GAWYS+
Sbjct: 241 GNDMVGSRTKIKVVKNKVAPPFRSADVDIVFGEGISKEGSLIDMATDLDIIVKSGAWYSF 300
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMS 414
+QRLGQGR+ A Q+L++NP + EIE+++R S
Sbjct: 301 REQRLGQGRENAKQFLKENPAVAAEIEQLIREHYS 335
>gi|387129198|ref|YP_006292088.1| recombinase A [Methylophaga sp. JAM7]
gi|386270487|gb|AFJ01401.1| RecA protein [Methylophaga sp. JAM7]
Length = 347
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 247/326 (75%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
+R++AL A+ I FGKG+V RLG A +E +G + LD+ALG GGLP+GR++E
Sbjct: 4 NRKKALGVALGQIEKQFGKGAVMRLGDGSAARDIEAVSTGSIGLDVALGIGGLPRGRVIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LHAIAE+QK+GG A VDAEHA DP Y++ LGV++++L+V QPD GE
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPLYAEKLGVNIDDLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ VDSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N
Sbjct: 124 QALEIADMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 184 RSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--KGDEILGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+S+ G ++D +IV + GAWYSY R+GQG
Sbjct: 242 TRVKVVKNKVAPPFKQVEFDILYGEGISREGELIDLGVAANIVEKSGAWYSYDGNRIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+D QYL+DN + +IE +R++M
Sbjct: 302 KDNVRQYLKDNDAIAADIESKIRAVM 327
>gi|395789472|ref|ZP_10468992.1| protein recA [Bartonella taylorii 8TBB]
gi|395430015|gb|EJF96067.1| protein recA [Bartonella taylorii 8TBB]
Length = 347
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/351 (55%), Positives = 258/351 (73%), Gaps = 10/351 (2%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK+GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + +V + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGVVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNV---SLPNQEE 434
GR+ A Q+LRD+ + EIE +R + + L NV S+ N EE
Sbjct: 299 GRENAKQFLRDHVEIATEIETALR---QNAGLIAIELLENVGAESIENDEE 346
>gi|425743838|ref|ZP_18861906.1| RecA protein [Acinetobacter baumannii WC-323]
gi|425492702|gb|EKU58955.1| RecA protein [Acinetobacter baumannii WC-323]
Length = 348
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 247/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRI+EI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K +GDE G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EGDEITGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+K+A F+I++G+G ++LG ++D A DIV + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFKEAVFQIMYGKGTNQLGEVVDLAVQQDIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++ +NP + +EIEK +R +
Sbjct: 302 NNVIRHFEENPAMAQEIEKQIREQL 326
>gi|418454705|ref|ZP_13025967.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418457581|ref|ZP_13028784.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS11b]
gi|387745820|gb|EIK32570.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387747313|gb|EIK34022.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS11b]
Length = 347
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 252/334 (75%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V T +G +TLD ALG GG PKGRI+EI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D DIV + GAWYSY +R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM--SDGSVHQ 420
+ YL++NP ++EEI++ +R + SDG V +
Sbjct: 302 ENVKMYLKENPQIKEEIDRKLREKLGISDGDVEE 335
>gi|291561253|emb|CBL40052.1| protein RecA [butyrate-producing bacterium SS3/4]
Length = 354
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 251/325 (77%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ I ++GKGSV +LG +G + +ET P+G L+LD+ALG GGLPKGR+VE
Sbjct: 5 DKLKALDAALTQIEKAYGKGSVMKLGDSGANMNIETVPTGSLSLDIALGLGGLPKGRVVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPDNGE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAIIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K C +IF+NQ+R K+GV +GNPE T+GG ALKF++SVRL++R T +K + E +G
Sbjct: 185 KTNCIVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRLDVRRTESLK--QSGEVIGNH 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VRV+V K+K++ P+K+AEF+I+FG+G+S+ G +LD A +IV + G+WY+Y ++GQG
Sbjct: 243 VRVKVVKNKIAPPFKEAEFDIMFGKGISREGDVLDLAADANIVEKSGSWYAYKGAKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSM 412
R+ A YL NPL+ EEIE VR +
Sbjct: 303 RENAKTYLAQNPLICEEIENQVREL 327
>gi|15924275|ref|NP_371809.1| recombinase A [Staphylococcus aureus subsp. aureus Mu50]
gi|15926868|ref|NP_374401.1| recombinase A [Staphylococcus aureus subsp. aureus N315]
gi|21282897|ref|NP_645985.1| recombinase A [Staphylococcus aureus subsp. aureus MW2]
gi|49483448|ref|YP_040672.1| recombinase A [Staphylococcus aureus subsp. aureus MRSA252]
gi|49486124|ref|YP_043345.1| recombinase A [Staphylococcus aureus subsp. aureus MSSA476]
gi|57651855|ref|YP_186161.1| recombinase A [Staphylococcus aureus subsp. aureus COL]
gi|82750885|ref|YP_416626.1| recombinase A [Staphylococcus aureus RF122]
gi|148267775|ref|YP_001246718.1| recombinase A [Staphylococcus aureus subsp. aureus JH9]
gi|150393834|ref|YP_001316509.1| recombinase A [Staphylococcus aureus subsp. aureus JH1]
gi|151221406|ref|YP_001332228.1| recombinase A [Staphylococcus aureus subsp. aureus str. Newman]
gi|156979606|ref|YP_001441865.1| recombinase A [Staphylococcus aureus subsp. aureus Mu3]
gi|161509451|ref|YP_001575110.1| recombinase A [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221142519|ref|ZP_03567012.1| recombinase A [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|228937974|ref|YP_499795.2| recombinase A [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|229558720|ref|YP_493875.2| recombinase A [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|253316422|ref|ZP_04839635.1| recombinase A [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253731904|ref|ZP_04866069.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733477|ref|ZP_04867642.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006072|ref|ZP_05144673.2| recombinase A [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257425339|ref|ZP_05601764.1| RecA protein [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428000|ref|ZP_05604398.1| RecA protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430633|ref|ZP_05607015.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
68-397]
gi|257433393|ref|ZP_05609751.1| recombinase A protein [Staphylococcus aureus subsp. aureus E1410]
gi|257436235|ref|ZP_05612282.1| RecA protein [Staphylococcus aureus subsp. aureus M876]
gi|257795659|ref|ZP_05644638.1| RecA protein [Staphylococcus aureus A9781]
gi|258416062|ref|ZP_05682330.1| recombination protein RecA [Staphylococcus aureus A9763]
gi|258421645|ref|ZP_05684569.1| RecA protein [Staphylococcus aureus A9719]
gi|258423874|ref|ZP_05686759.1| RecA protein [Staphylococcus aureus A9635]
gi|258434801|ref|ZP_05688875.1| recombinase A [Staphylococcus aureus A9299]
gi|258444623|ref|ZP_05692952.1| recombination protein RecA [Staphylococcus aureus A8115]
gi|258447544|ref|ZP_05695688.1| recombinase A [Staphylococcus aureus A6300]
gi|258449386|ref|ZP_05697489.1| recombinase A [Staphylococcus aureus A6224]
gi|258452584|ref|ZP_05700590.1| recombinase A [Staphylococcus aureus A5948]
gi|258454765|ref|ZP_05702729.1| recombinase A protein [Staphylococcus aureus A5937]
gi|262048173|ref|ZP_06021060.1| recombinase A [Staphylococcus aureus D30]
gi|262051347|ref|ZP_06023570.1| recombinase A [Staphylococcus aureus 930918-3]
gi|269202902|ref|YP_003282171.1| recombinase A [Staphylococcus aureus subsp. aureus ED98]
gi|282892773|ref|ZP_06301008.1| RecA protein [Staphylococcus aureus A8117]
gi|282903840|ref|ZP_06311728.1| RecA protein [Staphylococcus aureus subsp. aureus C160]
gi|282905603|ref|ZP_06313458.1| RecA protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908579|ref|ZP_06316409.1| recombinase A protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910857|ref|ZP_06318660.1| recombinase A protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914062|ref|ZP_06321849.1| RecA protein [Staphylococcus aureus subsp. aureus M899]
gi|282916545|ref|ZP_06324303.1| RecA protein [Staphylococcus aureus subsp. aureus D139]
gi|282918984|ref|ZP_06326719.1| RecA protein [Staphylococcus aureus subsp. aureus C427]
gi|282920529|ref|ZP_06328250.1| RecA protein [Staphylococcus aureus A9765]
gi|282924107|ref|ZP_06331783.1| RecA protein [Staphylococcus aureus subsp. aureus C101]
gi|282927627|ref|ZP_06335243.1| RecA protein [Staphylococcus aureus A10102]
gi|283770349|ref|ZP_06343241.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
H19]
gi|283958028|ref|ZP_06375479.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284024278|ref|ZP_06378676.1| recombinase A [Staphylococcus aureus subsp. aureus 132]
gi|293501094|ref|ZP_06666945.1| RecA protein [Staphylococcus aureus subsp. aureus 58-424]
gi|293510056|ref|ZP_06668764.1| RecA protein [Staphylococcus aureus subsp. aureus M809]
gi|293526642|ref|ZP_06671327.1| RecA protein [Staphylococcus aureus subsp. aureus M1015]
gi|294848281|ref|ZP_06789028.1| RecA protein [Staphylococcus aureus A9754]
gi|295406222|ref|ZP_06816029.1| RecA protein [Staphylococcus aureus A8819]
gi|295427772|ref|ZP_06820404.1| RecA protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296274843|ref|ZP_06857350.1| recombinase A [Staphylococcus aureus subsp. aureus MR1]
gi|297208068|ref|ZP_06924499.1| recombination protein A [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297244450|ref|ZP_06928333.1| RecA protein [Staphylococcus aureus A8796]
gi|297591270|ref|ZP_06949908.1| recombination protein A [Staphylococcus aureus subsp. aureus MN8]
gi|300912150|ref|ZP_07129593.1| recombination protein A [Staphylococcus aureus subsp. aureus TCH70]
gi|304381151|ref|ZP_07363804.1| recombination protein A [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379014476|ref|YP_005290712.1| recombinase A [Staphylococcus aureus subsp. aureus VC40]
gi|379020996|ref|YP_005297658.1| recombinase A [Staphylococcus aureus subsp. aureus M013]
gi|384547528|ref|YP_005736781.1| recombinase A [Staphylococcus aureus subsp. aureus ED133]
gi|384861878|ref|YP_005744598.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|384864512|ref|YP_005749871.1| protein RecA [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384867829|ref|YP_005748025.1| recombination protein A [Staphylococcus aureus subsp. aureus TCH60]
gi|384869820|ref|YP_005752534.1| protein recA [Staphylococcus aureus subsp. aureus T0131]
gi|385781513|ref|YP_005757684.1| protein RecA [Staphylococcus aureus subsp. aureus 11819-97]
gi|386728971|ref|YP_006195354.1| Reca [Staphylococcus aureus subsp. aureus 71193]
gi|387142893|ref|YP_005731286.1| recombinase A [Staphylococcus aureus subsp. aureus TW20]
gi|387150428|ref|YP_005741992.1| RecA protein [Staphylococcus aureus 04-02981]
gi|387602562|ref|YP_005734083.1| protein RecA [Staphylococcus aureus subsp. aureus ST398]
gi|404478626|ref|YP_006710056.1| recombinase A [Staphylococcus aureus 08BA02176]
gi|415683875|ref|ZP_11449077.1| recombinase A [Staphylococcus aureus subsp. aureus CGS00]
gi|415686477|ref|ZP_11450566.1| recombinase A [Staphylococcus aureus subsp. aureus CGS01]
gi|415691135|ref|ZP_11453374.1| recombinase A [Staphylococcus aureus subsp. aureus CGS03]
gi|416839336|ref|ZP_11902730.1| recombinase A [Staphylococcus aureus O11]
gi|416844721|ref|ZP_11905407.1| recombinase A [Staphylococcus aureus O46]
gi|417649428|ref|ZP_12299227.1| RecA protein [Staphylococcus aureus subsp. aureus 21189]
gi|417651255|ref|ZP_12301018.1| RecA protein [Staphylococcus aureus subsp. aureus 21172]
gi|417653281|ref|ZP_12303015.1| RecA protein [Staphylococcus aureus subsp. aureus 21193]
gi|417797256|ref|ZP_12444454.1| RecA protein [Staphylococcus aureus subsp. aureus 21305]
gi|417887032|ref|ZP_12531171.1| RecA protein [Staphylococcus aureus subsp. aureus 21195]
gi|417892104|ref|ZP_12536161.1| RecA protein [Staphylococcus aureus subsp. aureus 21200]
gi|417892187|ref|ZP_12536241.1| RecA protein [Staphylococcus aureus subsp. aureus 21201]
gi|417896078|ref|ZP_12540045.1| RecA protein [Staphylococcus aureus subsp. aureus 21235]
gi|417898386|ref|ZP_12542306.1| RecA protein [Staphylococcus aureus subsp. aureus 21259]
gi|417901943|ref|ZP_12545819.1| RecA protein [Staphylococcus aureus subsp. aureus 21266]
gi|417903427|ref|ZP_12547274.1| RecA protein [Staphylococcus aureus subsp. aureus 21269]
gi|418281384|ref|ZP_12894195.1| RecA protein [Staphylococcus aureus subsp. aureus 21178]
gi|418282818|ref|ZP_12895575.1| RecA protein [Staphylococcus aureus subsp. aureus 21202]
gi|418284614|ref|ZP_12897331.1| RecA protein [Staphylococcus aureus subsp. aureus 21209]
gi|418306718|ref|ZP_12918491.1| RecA protein [Staphylococcus aureus subsp. aureus 21194]
gi|418309741|ref|ZP_12921292.1| RecA protein [Staphylococcus aureus subsp. aureus 21331]
gi|418312484|ref|ZP_12923993.1| RecA protein [Staphylococcus aureus subsp. aureus 21334]
gi|418317201|ref|ZP_12928625.1| RecA protein [Staphylococcus aureus subsp. aureus 21340]
gi|418317778|ref|ZP_12929194.1| RecA protein [Staphylococcus aureus subsp. aureus 21232]
gi|418321690|ref|ZP_12933029.1| RecA protein [Staphylococcus aureus subsp. aureus VCU006]
gi|418424426|ref|ZP_12997548.1| protein recA [Staphylococcus aureus subsp. aureus VRS1]
gi|418427421|ref|ZP_13000433.1| protein recA [Staphylococcus aureus subsp. aureus VRS2]
gi|418430261|ref|ZP_13003177.1| protein recA [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433227|ref|ZP_13006004.1| protein recA [Staphylococcus aureus subsp. aureus VRS4]
gi|418436898|ref|ZP_13008700.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS5]
gi|418439770|ref|ZP_13011477.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS6]
gi|418442822|ref|ZP_13014424.1| protein recA [Staphylococcus aureus subsp. aureus VRS7]
gi|418445881|ref|ZP_13017357.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS8]
gi|418448825|ref|ZP_13020217.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS9]
gi|418451649|ref|ZP_13022983.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS10]
gi|418559139|ref|ZP_13123685.1| RecA protein [Staphylococcus aureus subsp. aureus 21252]
gi|418566670|ref|ZP_13131043.1| RecA protein [Staphylococcus aureus subsp. aureus 21264]
gi|418569123|ref|ZP_13133463.1| RecA protein [Staphylococcus aureus subsp. aureus 21272]
gi|418570861|ref|ZP_13135122.1| RecA protein [Staphylococcus aureus subsp. aureus 21283]
gi|418572304|ref|ZP_13136516.1| RecA protein [Staphylococcus aureus subsp. aureus 21333]
gi|418579119|ref|ZP_13143214.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1114]
gi|418582119|ref|ZP_13146197.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1605]
gi|418597662|ref|ZP_13161184.1| RecA protein [Staphylococcus aureus subsp. aureus 21342]
gi|418599717|ref|ZP_13163197.1| RecA protein [Staphylococcus aureus subsp. aureus 21343]
gi|418603090|ref|ZP_13166481.1| RecA protein [Staphylococcus aureus subsp. aureus 21345]
gi|418638146|ref|ZP_13200449.1| RecA protein [Staphylococcus aureus subsp. aureus IS-3]
gi|418642800|ref|ZP_13204986.1| RecA protein [Staphylococcus aureus subsp. aureus IS-24]
gi|418646070|ref|ZP_13208185.1| RecA protein [Staphylococcus aureus subsp. aureus IS-55]
gi|418648317|ref|ZP_13210362.1| RecA protein [Staphylococcus aureus subsp. aureus IS-88]
gi|418649220|ref|ZP_13211248.1| RecA protein [Staphylococcus aureus subsp. aureus IS-91]
gi|418654642|ref|ZP_13216538.1| RecA protein [Staphylococcus aureus subsp. aureus IS-99]
gi|418660124|ref|ZP_13221766.1| RecA protein [Staphylococcus aureus subsp. aureus IS-111]
gi|418661523|ref|ZP_13223108.1| RecA protein [Staphylococcus aureus subsp. aureus IS-122]
gi|418873504|ref|ZP_13427799.1| RecA protein [Staphylococcus aureus subsp. aureus IS-125]
gi|418875221|ref|ZP_13429481.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC93]
gi|418878134|ref|ZP_13432369.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880964|ref|ZP_13435183.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883892|ref|ZP_13438087.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1769]
gi|418886547|ref|ZP_13440695.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1150]
gi|418889078|ref|ZP_13443214.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1524]
gi|418891918|ref|ZP_13446033.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1176]
gi|418894985|ref|ZP_13449080.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1057]
gi|418897823|ref|ZP_13451893.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900693|ref|ZP_13454750.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1214]
gi|418903498|ref|ZP_13457539.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1770]
gi|418906221|ref|ZP_13460248.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC345D]
gi|418908996|ref|ZP_13462999.1| protein RecA [Staphylococcus aureus subsp. aureus CIG149]
gi|418911892|ref|ZP_13465875.1| protein RecA [Staphylococcus aureus subsp. aureus CIG547]
gi|418914383|ref|ZP_13468355.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418917080|ref|ZP_13471039.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1267]
gi|418920364|ref|ZP_13474297.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC348]
gi|418922867|ref|ZP_13476784.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1233]
gi|418925522|ref|ZP_13479424.1| protein RecA [Staphylococcus aureus subsp. aureus CIG2018]
gi|418928545|ref|ZP_13482431.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1612]
gi|418931356|ref|ZP_13485197.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1750]
gi|418934188|ref|ZP_13488011.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC128]
gi|418947384|ref|ZP_13499758.1| RecA protein [Staphylococcus aureus subsp. aureus IS-157]
gi|418951341|ref|ZP_13503445.1| RecA protein [Staphylococcus aureus subsp. aureus IS-160]
gi|418955522|ref|ZP_13507462.1| RecA protein [Staphylococcus aureus subsp. aureus IS-189]
gi|418980008|ref|ZP_13527796.1| Reca [Staphylococcus aureus subsp. aureus DR10]
gi|418982198|ref|ZP_13529906.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1242]
gi|418985867|ref|ZP_13533553.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1500]
gi|418988107|ref|ZP_13535780.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1835]
gi|418993906|ref|ZP_13541542.1| protein RecA [Staphylococcus aureus subsp. aureus CIG290]
gi|419774335|ref|ZP_14300305.1| RecA protein [Staphylococcus aureus subsp. aureus CO-23]
gi|419784966|ref|ZP_14310724.1| RecA protein [Staphylococcus aureus subsp. aureus IS-M]
gi|421150237|ref|ZP_15609893.1| recombinase A [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|422742402|ref|ZP_16796408.1| protein RecA [Staphylococcus aureus subsp. aureus MRSA177]
gi|422745483|ref|ZP_16799422.1| protein RecA [Staphylococcus aureus subsp. aureus MRSA131]
gi|424768030|ref|ZP_18195323.1| RecA protein [Staphylococcus aureus subsp. aureus CM05]
gi|424785118|ref|ZP_18211921.1| RecA protein [Staphylococcus aureus CN79]
gi|440706054|ref|ZP_20886803.1| RecA protein [Staphylococcus aureus subsp. aureus 21282]
gi|440734731|ref|ZP_20914343.1| recombinase A [Staphylococcus aureus subsp. aureus DSM 20231]
gi|443636838|ref|ZP_21120931.1| RecA protein [Staphylococcus aureus subsp. aureus 21236]
gi|443639802|ref|ZP_21123803.1| RecA protein [Staphylococcus aureus subsp. aureus 21196]
gi|448741802|ref|ZP_21723759.1| recombinase A [Staphylococcus aureus KT/314250]
gi|448743357|ref|ZP_21725266.1| recombinase A [Staphylococcus aureus KT/Y21]
gi|56749519|sp|Q6G9S8.1|RECA_STAAS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56749566|sp|Q6GHF0.1|RECA_STAAR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56753678|sp|P68844.1|RECA_STAAN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56753679|sp|P68845.1|RECA_STAAU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56753680|sp|P68846.1|RECA_STAAW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|60392999|sp|P68843.1|RECA_STAAM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|71152037|sp|Q5HGE6.1|RECA_STAAC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123741033|sp|Q2YXN2.1|RECA_STAAB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220684|sp|A7X1S3.1|RECA_STAA1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|172048869|sp|A6QGI4.1|RECA_STAAE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039611|sp|A6U1A4.1|RECA_STAA2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039612|sp|A5ISG9.1|RECA_STAA9 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039613|sp|A8Z1V6.1|RECA_STAAT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|13183627|gb|AAK15276.1|AF317802_1 RecA [Staphylococcus aureus]
gi|463285|gb|AAA50463.1| putative [Staphylococcus aureus]
gi|13701085|dbj|BAB42380.1| RecA protein [Staphylococcus aureus subsp. aureus N315]
gi|14247055|dbj|BAB57447.1| RecA protein [Staphylococcus aureus subsp. aureus Mu50]
gi|21204336|dbj|BAB95033.1| RecA protein [Staphylococcus aureus subsp. aureus MW2]
gi|49241577|emb|CAG40263.1| recombinase A [Staphylococcus aureus subsp. aureus MRSA252]
gi|49244567|emb|CAG42996.1| recombinase A [Staphylococcus aureus subsp. aureus MSSA476]
gi|57286041|gb|AAW38135.1| recA protein [Staphylococcus aureus subsp. aureus COL]
gi|82656416|emb|CAI80836.1| recombinase A protein [Staphylococcus aureus RF122]
gi|147740844|gb|ABQ49142.1| RecA protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946286|gb|ABR52222.1| recA protein [Staphylococcus aureus subsp. aureus JH1]
gi|150374206|dbj|BAF67466.1| recombinase A [Staphylococcus aureus subsp. aureus str. Newman]
gi|156721741|dbj|BAF78158.1| RecA protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160368260|gb|ABX29231.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724314|gb|EES93043.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728531|gb|EES97260.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
TCH130]
gi|257271796|gb|EEV03934.1| RecA protein [Staphylococcus aureus subsp. aureus 55/2053]
gi|257274841|gb|EEV06328.1| RecA protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278761|gb|EEV09380.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
68-397]
gi|257281486|gb|EEV11623.1| recombinase A protein [Staphylococcus aureus subsp. aureus E1410]
gi|257284517|gb|EEV14637.1| RecA protein [Staphylococcus aureus subsp. aureus M876]
gi|257789631|gb|EEV27971.1| RecA protein [Staphylococcus aureus A9781]
gi|257839210|gb|EEV63686.1| recombination protein RecA [Staphylococcus aureus A9763]
gi|257842331|gb|EEV66756.1| RecA protein [Staphylococcus aureus A9719]
gi|257845903|gb|EEV69932.1| RecA protein [Staphylococcus aureus A9635]
gi|257849162|gb|EEV73144.1| recombinase A [Staphylococcus aureus A9299]
gi|257850116|gb|EEV74069.1| recombination protein RecA [Staphylococcus aureus A8115]
gi|257853735|gb|EEV76694.1| recombinase A [Staphylococcus aureus A6300]
gi|257857374|gb|EEV80272.1| recombinase A [Staphylococcus aureus A6224]
gi|257859802|gb|EEV82644.1| recombinase A [Staphylococcus aureus A5948]
gi|257863148|gb|EEV85912.1| recombinase A protein [Staphylococcus aureus A5937]
gi|259160722|gb|EEW45743.1| recombinase A [Staphylococcus aureus 930918-3]
gi|259163739|gb|EEW48294.1| recombinase A [Staphylococcus aureus D30]
gi|262075192|gb|ACY11165.1| recombinase A [Staphylococcus aureus subsp. aureus ED98]
gi|269940776|emb|CBI49158.1| recombinase A [Staphylococcus aureus subsp. aureus TW20]
gi|282314079|gb|EFB44471.1| RecA protein [Staphylococcus aureus subsp. aureus C101]
gi|282316794|gb|EFB47168.1| RecA protein [Staphylococcus aureus subsp. aureus C427]
gi|282319032|gb|EFB49384.1| RecA protein [Staphylococcus aureus subsp. aureus D139]
gi|282322130|gb|EFB52454.1| RecA protein [Staphylococcus aureus subsp. aureus M899]
gi|282325462|gb|EFB55771.1| recombinase A protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327641|gb|EFB57924.1| recombinase A protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330895|gb|EFB60409.1| RecA protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282590630|gb|EFB95707.1| RecA protein [Staphylococcus aureus A10102]
gi|282594191|gb|EFB99178.1| RecA protein [Staphylococcus aureus A9765]
gi|282595458|gb|EFC00422.1| RecA protein [Staphylococcus aureus subsp. aureus C160]
gi|282764770|gb|EFC04895.1| RecA protein [Staphylococcus aureus A8117]
gi|283460496|gb|EFC07586.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
H19]
gi|283470500|emb|CAQ49711.1| protein RecA [Staphylococcus aureus subsp. aureus ST398]
gi|283790177|gb|EFC28994.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816967|gb|ADC37454.1| RecA protein [Staphylococcus aureus 04-02981]
gi|290920714|gb|EFD97777.1| RecA protein [Staphylococcus aureus subsp. aureus M1015]
gi|291096099|gb|EFE26360.1| RecA protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291467000|gb|EFF09518.1| RecA protein [Staphylococcus aureus subsp. aureus M809]
gi|294825081|gb|EFG41503.1| RecA protein [Staphylococcus aureus A9754]
gi|294968810|gb|EFG44832.1| RecA protein [Staphylococcus aureus A8819]
gi|295128130|gb|EFG57764.1| RecA protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296887311|gb|EFH26213.1| recombination protein A [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297178480|gb|EFH37726.1| RecA protein [Staphylococcus aureus A8796]
gi|297576156|gb|EFH94872.1| recombination protein A [Staphylococcus aureus subsp. aureus MN8]
gi|298694577|gb|ADI97799.1| recombinase A protein [Staphylococcus aureus subsp. aureus ED133]
gi|300886396|gb|EFK81598.1| recombination protein A [Staphylococcus aureus subsp. aureus TCH70]
gi|302751107|gb|ADL65284.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340134|gb|EFM06075.1| recombination protein A [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312438334|gb|ADQ77405.1| recombination protein A [Staphylococcus aureus subsp. aureus TCH60]
gi|312829679|emb|CBX34521.1| protein RecA [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315131079|gb|EFT87063.1| recombinase A [Staphylococcus aureus subsp. aureus CGS03]
gi|315194173|gb|EFU24566.1| recombinase A [Staphylococcus aureus subsp. aureus CGS00]
gi|315198527|gb|EFU28856.1| recombinase A [Staphylococcus aureus subsp. aureus CGS01]
gi|320140898|gb|EFW32745.1| protein RecA [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144386|gb|EFW36152.1| protein RecA [Staphylococcus aureus subsp. aureus MRSA177]
gi|323441067|gb|EGA98774.1| recombinase A [Staphylococcus aureus O11]
gi|323443936|gb|EGB01547.1| recombinase A [Staphylococcus aureus O46]
gi|329313955|gb|AEB88368.1| Protein recA [Staphylococcus aureus subsp. aureus T0131]
gi|329727439|gb|EGG63895.1| RecA protein [Staphylococcus aureus subsp. aureus 21172]
gi|329727797|gb|EGG64248.1| RecA protein [Staphylococcus aureus subsp. aureus 21189]
gi|329733663|gb|EGG69991.1| RecA protein [Staphylococcus aureus subsp. aureus 21193]
gi|334267304|gb|EGL85768.1| RecA protein [Staphylococcus aureus subsp. aureus 21305]
gi|341840979|gb|EGS82451.1| RecA protein [Staphylococcus aureus subsp. aureus 21235]
gi|341845782|gb|EGS86984.1| RecA protein [Staphylococcus aureus subsp. aureus 21266]
gi|341848419|gb|EGS89582.1| RecA protein [Staphylococcus aureus subsp. aureus 21259]
gi|341850048|gb|EGS91181.1| RecA protein [Staphylococcus aureus subsp. aureus 21269]
gi|341851390|gb|EGS92319.1| RecA protein [Staphylococcus aureus subsp. aureus 21200]
gi|341858154|gb|EGS98955.1| RecA protein [Staphylococcus aureus subsp. aureus 21201]
gi|341858454|gb|EGS99244.1| RecA protein [Staphylococcus aureus subsp. aureus 21195]
gi|359830305|gb|AEV78283.1| RecA protein [Staphylococcus aureus subsp. aureus M013]
gi|364522502|gb|AEW65252.1| protein RecA [Staphylococcus aureus subsp. aureus 11819-97]
gi|365165206|gb|EHM57034.1| RecA protein [Staphylococcus aureus subsp. aureus 21178]
gi|365168415|gb|EHM59753.1| RecA protein [Staphylococcus aureus subsp. aureus 21202]
gi|365173162|gb|EHM63749.1| RecA protein [Staphylococcus aureus subsp. aureus 21209]
gi|365224305|gb|EHM65570.1| RecA protein [Staphylococcus aureus subsp. aureus VCU006]
gi|365237864|gb|EHM78703.1| RecA protein [Staphylococcus aureus subsp. aureus 21331]
gi|365238129|gb|EHM78966.1| RecA protein [Staphylococcus aureus subsp. aureus 21334]
gi|365239573|gb|EHM80375.1| RecA protein [Staphylococcus aureus subsp. aureus 21340]
gi|365245046|gb|EHM85698.1| RecA protein [Staphylococcus aureus subsp. aureus 21232]
gi|365246375|gb|EHM86931.1| RecA protein [Staphylococcus aureus subsp. aureus 21194]
gi|371969940|gb|EHO87378.1| RecA protein [Staphylococcus aureus subsp. aureus 21264]
gi|371975430|gb|EHO92724.1| RecA protein [Staphylococcus aureus subsp. aureus 21252]
gi|371978308|gb|EHO95558.1| RecA protein [Staphylococcus aureus subsp. aureus 21272]
gi|371983041|gb|EHP00189.1| RecA protein [Staphylococcus aureus subsp. aureus 21283]
gi|371984788|gb|EHP01897.1| RecA protein [Staphylococcus aureus subsp. aureus 21333]
gi|374363173|gb|AEZ37278.1| recombinase A [Staphylococcus aureus subsp. aureus VC40]
gi|374393724|gb|EHQ65028.1| RecA protein [Staphylococcus aureus subsp. aureus 21342]
gi|374393819|gb|EHQ65122.1| RecA protein [Staphylococcus aureus subsp. aureus 21345]
gi|374396375|gb|EHQ67616.1| RecA protein [Staphylococcus aureus subsp. aureus 21343]
gi|375014467|gb|EHS08148.1| RecA protein [Staphylococcus aureus subsp. aureus IS-99]
gi|375015913|gb|EHS09557.1| RecA protein [Staphylococcus aureus subsp. aureus IS-24]
gi|375021536|gb|EHS15032.1| RecA protein [Staphylococcus aureus subsp. aureus IS-55]
gi|375023370|gb|EHS16833.1| RecA protein [Staphylococcus aureus subsp. aureus IS-3]
gi|375026734|gb|EHS20113.1| RecA protein [Staphylococcus aureus subsp. aureus IS-88]
gi|375029593|gb|EHS22918.1| RecA protein [Staphylococcus aureus subsp. aureus IS-91]
gi|375033014|gb|EHS26225.1| RecA protein [Staphylococcus aureus subsp. aureus IS-111]
gi|375038705|gb|EHS31666.1| RecA protein [Staphylococcus aureus subsp. aureus IS-122]
gi|375366041|gb|EHS70053.1| RecA protein [Staphylococcus aureus subsp. aureus IS-125]
gi|375371005|gb|EHS74797.1| RecA protein [Staphylococcus aureus subsp. aureus IS-189]
gi|375373288|gb|EHS76974.1| RecA protein [Staphylococcus aureus subsp. aureus IS-160]
gi|375376127|gb|EHS79676.1| RecA protein [Staphylococcus aureus subsp. aureus IS-157]
gi|377694256|gb|EHT18621.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1165]
gi|377694791|gb|EHT19155.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1057]
gi|377697146|gb|EHT21501.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1114]
gi|377703161|gb|EHT27477.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1214]
gi|377704479|gb|EHT28788.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1242]
gi|377705685|gb|EHT29989.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1500]
gi|377710529|gb|EHT34767.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1605]
gi|377714638|gb|EHT38837.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1750]
gi|377714979|gb|EHT39177.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1769]
gi|377719895|gb|EHT44065.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1835]
gi|377725270|gb|EHT49385.1| protein RecA [Staphylococcus aureus subsp. aureus CIG547]
gi|377725500|gb|EHT49613.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1150]
gi|377731250|gb|EHT55307.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1176]
gi|377731857|gb|EHT55910.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1213]
gi|377736190|gb|EHT60220.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1233]
gi|377738457|gb|EHT62466.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1612]
gi|377742513|gb|EHT66498.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1770]
gi|377744591|gb|EHT68568.1| protein RecA [Staphylococcus aureus subsp. aureus CIG2018]
gi|377745956|gb|EHT69931.1| protein RecA [Staphylococcus aureus subsp. aureus CIG290]
gi|377750254|gb|EHT74192.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1267]
gi|377754034|gb|EHT77944.1| protein RecA [Staphylococcus aureus subsp. aureus CIG149]
gi|377754588|gb|EHT78497.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1524]
gi|377757885|gb|EHT81773.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377760858|gb|EHT84734.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC341D]
gi|377765521|gb|EHT89371.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377765723|gb|EHT89572.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC348]
gi|377770281|gb|EHT94043.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC93]
gi|377770931|gb|EHT94690.1| protein RecA [Staphylococcus aureus subsp. aureus CIGC128]
gi|379992171|gb|EIA13628.1| Reca [Staphylococcus aureus subsp. aureus DR10]
gi|383363567|gb|EID40899.1| RecA protein [Staphylococcus aureus subsp. aureus IS-M]
gi|383971861|gb|EID87923.1| RecA protein [Staphylococcus aureus subsp. aureus CO-23]
gi|384230264|gb|AFH69511.1| Reca [Staphylococcus aureus subsp. aureus 71193]
gi|387718656|gb|EIK06614.1| protein recA [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719008|gb|EIK06964.1| protein recA [Staphylococcus aureus subsp. aureus VRS2]
gi|387720333|gb|EIK08245.1| protein recA [Staphylococcus aureus subsp. aureus VRS1]
gi|387725667|gb|EIK13271.1| protein recA [Staphylococcus aureus subsp. aureus VRS4]
gi|387728002|gb|EIK15502.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS5]
gi|387730732|gb|EIK18093.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS6]
gi|387735809|gb|EIK22919.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS8]
gi|387737487|gb|EIK24553.1| protein recA [Staphylococcus aureus subsp. aureus VRS7]
gi|387738041|gb|EIK25095.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS9]
gi|387744530|gb|EIK31294.1| RecA protein @ group I intron-containing [Staphylococcus aureus
subsp. aureus VRS10]
gi|394329627|gb|EJE55729.1| recombinase A [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|402348667|gb|EJU83646.1| RecA protein [Staphylococcus aureus subsp. aureus CM05]
gi|404440115|gb|AFR73308.1| recombinase A [Staphylococcus aureus 08BA02176]
gi|421956528|gb|EKU08857.1| RecA protein [Staphylococcus aureus CN79]
gi|436431759|gb|ELP29112.1| recombinase A [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436507585|gb|ELP43265.1| RecA protein [Staphylococcus aureus subsp. aureus 21282]
gi|443406453|gb|ELS65033.1| RecA protein [Staphylococcus aureus subsp. aureus 21196]
gi|443406815|gb|ELS65385.1| RecA protein [Staphylococcus aureus subsp. aureus 21236]
gi|445547440|gb|ELY15709.1| recombinase A [Staphylococcus aureus KT/314250]
gi|445563286|gb|ELY19448.1| recombinase A [Staphylococcus aureus KT/Y21]
Length = 347
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 252/334 (75%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V T +G +TLD ALG GG PKGRI+EI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D DIV + GAWYSY +R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM--SDGSVHQ 420
+ YL++NP ++EEI++ +R + SDG V +
Sbjct: 302 ENVKMYLKENPQIKEEIDRKLREKLGISDGDVEE 335
>gi|444436558|gb|AGE09647.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/320 (59%), Positives = 246/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIV
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGRIV 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP + EIE
Sbjct: 301 GRENAKTFLRDNPEMANEIE 320
>gi|395787671|ref|ZP_10467263.1| protein recA [Bartonella birtlesii LL-WM9]
gi|395410293|gb|EJF76848.1| protein recA [Bartonella birtlesii LL-WM9]
Length = 347
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/349 (55%), Positives = 256/349 (73%), Gaps = 7/349 (2%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK+GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + +V + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGVVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
GR+ A Q+LRD+ + EIE +R + + L NV N E +
Sbjct: 299 GRENAKQFLRDHVEIATEIETALR---QNAGLIAIELLENVGAENIEND 344
>gi|379795652|ref|YP_005325650.1| recombinase A [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872642|emb|CCE58981.1| recombinase A [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 347
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 252/334 (75%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V T +G +TLD ALG GG PKGRI+EI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D DIV + GAWYSY +R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM--SDGSVHQ 420
+ YL++NP ++EEI++ +R + SDG V +
Sbjct: 302 ENVKMYLKENPQIKEEIDRKLREKLGISDGDVEE 335
>gi|444299276|emb|CCP29587.1| recombinase A, partial [Agrobacterium genomosp. 1]
Length = 322
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/320 (59%), Positives = 246/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIV
Sbjct: 2 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGRIV 61
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 62 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 121
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 122 EQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 181
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 182 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 239
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 240 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 299
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP + EIE
Sbjct: 300 GRENAKTFLRDNPEMASEIE 319
>gi|118588632|ref|ZP_01546040.1| recombinase A [Stappia aggregata IAM 12614]
gi|118438618|gb|EAV45251.1| recombinase A [Labrenzia aggregata IAM 12614]
Length = 344
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 249/323 (77%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +ALDAA++ I +FGKGS+ ++G V+ +G L LD+ALG GGLP+GRIVE
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMKMGQGQVVEVQAVSTGSLGLDIALGIGGLPRGRIVE 60
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHA++E QK GG +DAEHA DP Y++ LGVD++NL++ QPD GE
Sbjct: 61 IYGPESSGKTTLALHAVSEAQKTGGICAFIDAEHALDPIYARKLGVDIDNLLISQPDAGE 120
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ +DSV+ALTP+AE+EGE+G G+QARLMSQALRK++ + S
Sbjct: 121 QALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASIS 180
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE VG +
Sbjct: 181 KSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKDR--DEVVGNQ 238
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEGVSK G ++D +IV + GAW+SY QRLGQG
Sbjct: 239 TRVKVVKNKLAPPFRQVEFDIVYGEGVSKTGELIDLGVKGNIVEKSGAWFSYNSQRLGQG 298
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+L+DNP + +EIE +R
Sbjct: 299 RENAKQFLKDNPEIADEIELAIR 321
>gi|418562908|ref|ZP_13127358.1| RecA protein [Staphylococcus aureus subsp. aureus 21262]
gi|371972754|gb|EHO90126.1| RecA protein [Staphylococcus aureus subsp. aureus 21262]
Length = 347
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 252/334 (75%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V T +G +TLD ALG GG PKGRI+EI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D DIV + GAWYSY +R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM--SDGSVHQ 420
+ YL++NP ++EEI++ +R + SDG V +
Sbjct: 302 ENVKMYLKENPQIKEEIDRKLREKLGISDGDVEE 335
>gi|144123|gb|AAA22999.1| RecA protein [Brucella abortus]
Length = 360
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/324 (59%), Positives = 248/324 (76%), Gaps = 5/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGV +ENL++ QP G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVHLENLLISQPITG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQA+RK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSH-GLQARLMSQAVRKLTGSI 192
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 193 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 250
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 251 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 310
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 311 GRENAKQYLKDNPEVAREIETTLR 334
>gi|207366250|emb|CAQ58020.1| recombinase A [Agrobacterium tumefaciens]
gi|207366252|emb|CAQ58021.1| recombinase A [Agrobacterium tumefaciens]
gi|207366254|emb|CAQ58022.1| recombinase A [Agrobacterium tumefaciens]
gi|207366256|emb|CAQ58023.1| recombinase A [Agrobacterium tumefaciens]
gi|207366258|emb|CAQ58024.1| recombinase A [Agrobacterium tumefaciens]
gi|207366260|emb|CAQ58025.1| recombinase A [Agrobacterium tumefaciens]
gi|207366262|emb|CAQ58026.1| recombinase A [Agrobacterium tumefaciens]
gi|207366264|emb|CAQ58027.1| recombinase A [Agrobacterium tumefaciens]
gi|207366266|emb|CAQ58028.1| recombinase A [Agrobacterium tumefaciens]
gi|207366268|emb|CAQ58029.1| recombinase A [Agrobacterium tumefaciens]
gi|207366270|emb|CAQ58030.1| recombinase A [Agrobacterium tumefaciens]
gi|207366272|emb|CAQ58031.1| recombinase A [Agrobacterium tumefaciens]
gi|207366274|emb|CAQ58032.1| recombinase A [Agrobacterium tumefaciens]
gi|207366276|emb|CAQ58033.1| recombinase A [Agrobacterium tumefaciens]
gi|444436478|gb|AGE09607.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436480|gb|AGE09608.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436482|gb|AGE09609.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436484|gb|AGE09610.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436486|gb|AGE09611.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436488|gb|AGE09612.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436490|gb|AGE09613.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436492|gb|AGE09614.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436494|gb|AGE09615.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436496|gb|AGE09616.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436498|gb|AGE09617.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436500|gb|AGE09618.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436502|gb|AGE09619.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436504|gb|AGE09620.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436506|gb|AGE09621.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436508|gb|AGE09622.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436510|gb|AGE09623.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436512|gb|AGE09624.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436514|gb|AGE09625.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436516|gb|AGE09626.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436518|gb|AGE09627.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436520|gb|AGE09628.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436522|gb|AGE09629.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436524|gb|AGE09630.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436526|gb|AGE09631.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436528|gb|AGE09632.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436530|gb|AGE09633.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436532|gb|AGE09634.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436534|gb|AGE09635.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436536|gb|AGE09636.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436538|gb|AGE09637.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436540|gb|AGE09638.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436542|gb|AGE09639.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436544|gb|AGE09640.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436546|gb|AGE09641.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436548|gb|AGE09642.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436550|gb|AGE09643.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436552|gb|AGE09644.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436554|gb|AGE09645.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436556|gb|AGE09646.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436560|gb|AGE09648.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436562|gb|AGE09649.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/320 (59%), Positives = 246/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIV
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGRIV 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP + EIE
Sbjct: 301 GRENAKTFLRDNPEMASEIE 320
>gi|387780393|ref|YP_005755191.1| recombinase A [Staphylococcus aureus subsp. aureus LGA251]
gi|344177495|emb|CCC87964.1| recombinase A [Staphylococcus aureus subsp. aureus LGA251]
Length = 347
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 251/334 (75%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V T +G +TLD ALG GG PKGRI+EI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ALGVD+ NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDINNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D DIV + GAWYSY +R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM--SDGSVHQ 420
+ YL++NP ++EEI++ +R + SDG V +
Sbjct: 302 ENVKMYLKENPQIKEEIDRKLREKLGISDGDVEE 335
>gi|196247558|ref|ZP_03146260.1| recA protein [Geobacillus sp. G11MC16]
gi|196212342|gb|EDY07099.1| recA protein [Geobacillus sp. G11MC16]
Length = 346
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 247/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ AL+ A+ I FGKG++ +LG + T PSG L LD+ALG GG P+GRI+EI
Sbjct: 4 DRQAALEQALKQIERQFGKGAIMKLGEQAERQISTVPSGSLALDIALGVGGYPRGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPIYAQKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 124 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF+ASVRLE+R +IK +G++ VG +
Sbjct: 184 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYASVRLEVRRAEQIK--QGNDMVGNKT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K A+ +I++GEG+S+ G ++D A +DIV + G+WYSY D+RLGQGR
Sbjct: 242 KIKVVKNKVAPPFKTADVDIMYGEGISREGEIIDMAAELDIVQKSGSWYSYKDERLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++NP + EEI + +R
Sbjct: 302 ENAKQFLKENPHIAEEIARAIR 323
>gi|384550042|ref|YP_005739294.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302332891|gb|ADL23084.1| recombination protein RecA [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 347
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 251/334 (75%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V T +G +TLD ALG GG PKGRI+EI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D DIV + GAWYSY +R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM--SDGSVHQ 420
+ YL++NP +EEI++ +R + SDG V +
Sbjct: 302 ENVKMYLKENPQFKEEIDRKLREKLGISDGDVEE 335
>gi|403054210|ref|ZP_10908694.1| recombinase A [Acinetobacter bereziniae LMG 1003]
gi|445426086|ref|ZP_21437512.1| RecA protein [Acinetobacter sp. WC-743]
gi|444753039|gb|ELW77708.1| RecA protein [Acinetobacter sp. WC-743]
Length = 347
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 252/325 (77%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPDNGE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+++A F+I++G+GV+ LG ++D A ++V + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFREAIFQIMYGKGVNHLGELVDLAVAQELVQKAGAWYSYQGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++L +NP L +++++++R +
Sbjct: 302 NNVIRHLEENPQLAQDLDRMIREKL 326
>gi|162148079|ref|YP_001602540.1| protein recA (recombinase A) [Gluconacetobacter diazotrophicus PAl
5]
gi|161786656|emb|CAP56239.1| Protein recA (Recombinase A) [Gluconacetobacter diazotrophicus PAl
5]
Length = 381
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGSV RLG V+ +G L LD+ALG GGLP+GRIVE
Sbjct: 38 IDKSKALEGALSQIERAFGKGSVMRLGQRANEAVDVISTGSLGLDIALGIGGLPRGRIVE 97
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVDV+NL++ QPD GE
Sbjct: 98 IYGPESSGKTTLALHAIAEAQKKGGVCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGE 157
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G S
Sbjct: 158 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVS 217
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IFLNQIR KIGV +G+PE T+GG ALKF+ASVR++IR G+IK DE VG +
Sbjct: 218 RSNTMMIFLNQIRLKIGVMFGSPETTTGGNALKFYASVRMDIRRIGQIKD--KDEVVGNQ 275
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D IV + GAW+SY QR+GQG
Sbjct: 276 TRVKVVKNKMAPPFRQVEFDIVYGEGISKMGELIDLGVKAGIVEKSGAWFSYDSQRIGQG 335
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + QYLR++P + +IE+ VR
Sbjct: 336 RENSKQYLREHPEMAADIERRVR 358
>gi|430003827|emb|CCF19618.1| Recombinase A (recA) [Rhizobium sp.]
Length = 348
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/324 (59%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ +LG+ + ET +G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKSKALDAALSQIERSFGKGSIMKLGAKENVVETETVSTGSLSLDIALGIGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 181 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +L+DNP L EIE +R
Sbjct: 299 GRENAKTFLKDNPELAREIELALR 322
>gi|291519143|emb|CBK74364.1| protein RecA [Butyrivibrio fibrisolvens 16/4]
Length = 350
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 253/328 (77%), Gaps = 5/328 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ RALDAA++ I +GKGSV +LG VET P+G ++LDLALG GG PKGRI+EI
Sbjct: 5 DKLRALDAAISQIEKQYGKGSVMKLGEGANIQVETVPTGSISLDLALGQGGFPKGRIIEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALHA+AEVQK GG A +DAEHA DP Y+KA+GV++++L + QPDNGE
Sbjct: 65 YGPESSGKTTLALHAVAEVQKAGGIAGFIDAEHALDPKYAKAIGVNIDDLYISQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + M RSGA+D+I VDSV+AL P+AEI+G++G +GL ARLMSQA+RK++G +K
Sbjct: 125 ALEITETMVRSGAMDIIVVDSVAALVPKAEIDGDMGDSHVGLHARLMSQAMRKLTGIVAK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD-EDVGVR 327
C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R +I+++K + E +G R
Sbjct: 185 TNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASVRIDVR---RIEALKQNGEVIGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R ++ K+KV+ P+++AEF+I+FGEG+S+ G +LD A +DIV + GAWY+Y +++GQG
Sbjct: 242 TRAKIVKNKVAPPFREAEFDIMFGEGISREGDILDVATNLDIVQKSGAWYAYLGEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSD 415
R+ A YL+ NP + EEI +R ++
Sbjct: 302 RENAKMYLKQNPEVCEEIAAAIRDHYAE 329
>gi|49474376|ref|YP_032418.1| recombinase A [Bartonella quintana str. Toulouse]
gi|59798256|sp|Q6FZF0.1|RECA_BARQU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49239880|emb|CAF26278.1| recA protein [Bartonella quintana str. Toulouse]
Length = 347
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/349 (55%), Positives = 255/349 (73%), Gaps = 7/349 (2%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGSIKD--RDMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + IV + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
GR+ A Q+LR++ + EIE +R + + L N N E N
Sbjct: 299 GRENAKQFLREHAEIATEIETALR---QNAGLIAIELLENAGSENTESN 344
>gi|332981390|ref|YP_004462831.1| recA protein [Mahella australiensis 50-1 BON]
gi|332699068|gb|AEE96009.1| recA protein [Mahella australiensis 50-1 BON]
Length = 345
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/347 (52%), Positives = 256/347 (73%), Gaps = 4/347 (1%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRI 145
++++ AL+ A++ I FGKGS+ +LG L VE P+G L+LD+ALG GG+P+GR+
Sbjct: 1 MMEKEHALETALSQIEKRFGKGSIMKLGDDTARLNVEVIPTGSLSLDIALGVGGVPRGRV 60
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
VEIFGPESSGKTT+ALH +A+ QK+GG A +DAEHA DP+Y+K LGV++++L+V QPD
Sbjct: 61 VEIFGPESSGKTTVALHIVAQAQKIGGTAAFIDAEHALDPAYAKRLGVNIDDLLVSQPDT 120
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIA+ + RSGA+D++ +DSV+AL P+AEI+GE+G +GLQARLMSQALRK++G
Sbjct: 121 GEQALEIAEALVRSGAVDVVVIDSVAALVPQAEIDGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
SK+ IF+NQ+R K+GV YGNPE T GG ALKF+ASVRL++R IK+ G + +G
Sbjct: 181 ISKSKSVAIFINQLREKVGVMYGNPETTPGGRALKFYASVRLDVRKADTIKN--GADVIG 238
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
RV+V K+KV+ P+KQAEF+II+GEG+S+ +LD A DI+ + G+WYSY D R+G
Sbjct: 239 THTRVKVVKNKVAPPFKQAEFDIIYGEGISRESDILDLAVDQDIIAKSGSWYSYNDNRIG 298
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQ 432
QG++ A Q+L+DNP + +IE+ +R G V S + V P +
Sbjct: 299 QGKENAKQFLKDNPEICRDIEEKIREQYKLGKVKLISAVDEVEEPAE 345
>gi|323137974|ref|ZP_08073048.1| recA protein [Methylocystis sp. ATCC 49242]
gi|322396693|gb|EFX99220.1| recA protein [Methylocystis sp. ATCC 49242]
Length = 356
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG A+ +ET +G L LD+ALG GGLP+GR+V
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTL LH IAE QK+GG VDAEHA DP Y++ LGV++E L++ QPD G
Sbjct: 74 EIYGPESSGKTTLTLHVIAEAQKMGGVCAFVDAEHALDPVYARKLGVNLEELLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G Q GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDVQPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+++ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR TG IK DE +G
Sbjct: 194 ARSNTLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRTGSIKD--RDEAIGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+KV+ P+KQ EF+I++GEGVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELIDLGVKAGVVEKSGAWFSYDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR NP IE+ +R
Sbjct: 312 GRENAKNFLRQNPEAAARIEQAIR 335
>gi|83589927|ref|YP_429936.1| recA protein [Moorella thermoacetica ATCC 39073]
gi|83572841|gb|ABC19393.1| RecA protein [Moorella thermoacetica ATCC 39073]
Length = 348
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 243/323 (75%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++QRAL+ A++ I FGKGS+ RLG G L VE +G L LDLALG GGLP+GR++E
Sbjct: 8 EKQRALEMALSQIERHFGKGSIMRLGETGARLNVEAISTGALPLDLALGVGGLPRGRVIE 67
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTT+ALH IAE Q+ GG A +DAEHA DP Y+ LGVD +NL+V QPD GE
Sbjct: 68 IFGPESSGKTTVALHVIAEAQRAGGTAAFIDAEHALDPVYAHNLGVDTDNLLVSQPDTGE 127
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID+I +DSV+AL PRAE+EGE+G +GLQARLMSQALRK++G S
Sbjct: 128 QALEIAEALVRSGAIDVIVIDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLAGIIS 187
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ IF+NQ+R K+GV +GNPE T GG ALKF+ASVRL++R ++K+ G E VG R
Sbjct: 188 KSRTVAIFINQLREKVGVLFGNPETTPGGRALKFYASVRLDVRKVEQLKA--GTEIVGNR 245
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++QAEF+II+G G+ + GC+LD +DI+ + GAWYS G+ RLGQG
Sbjct: 246 TRVKVVKNKVAPPFRQAEFDIIYGRGIDREGCLLDMGTELDIIKKSGAWYSLGEDRLGQG 305
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +LR++P L +E +R
Sbjct: 306 REAAKDFLREHPDLAAALETKIR 328
>gi|417859682|ref|ZP_12504738.1| recombinase A [Agrobacterium tumefaciens F2]
gi|338822746|gb|EGP56714.1| recombinase A [Agrobacterium tumefaciens F2]
Length = 363
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPETANEIELALR 335
>gi|258516256|ref|YP_003192478.1| recA protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779961|gb|ACV63855.1| recA protein [Desulfotomaculum acetoxidans DSM 771]
Length = 343
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 251/326 (76%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+Q+AL+ A+ DI FGKG+V +LG + VE +G L+LD+ALG GG+P+GR+VEI
Sbjct: 4 DKQKALERALADIEKQFGKGAVMKLGESPAKNVEVISTGVLSLDIALGIGGVPRGRVVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QK GG A VDAEHA DP+Y++ LGVD+ENL+V QPD GE
Sbjct: 64 YGPESSGKTTVALHVVAEAQKDGGMAAFVDAEHALDPTYAQKLGVDIENLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL PRAEIEG++G +GLQARLMSQALRK++G SK
Sbjct: 124 ALEIAEALVRSGAVDVIVVDSVAALVPRAEIEGDMGDSHVGLQARLMSQALRKLTGVVSK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ CT+IF+NQ+R K+GV +GNPE T GG ALKF++S+RL++R IK +G + G R
Sbjct: 184 SNCTIIFINQLREKVGVMFGNPETTPGGRALKFYSSIRLDVRKGEPIK--QGADFTGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+KQAEF+I+FG G+S+ G +LD A ++I+ + GAWYSY ++RLGQGR
Sbjct: 242 KVKVVKNKMAPPFKQAEFDIMFGTGISREGTLLDVAVDLNIINKSGAWYSYNNERLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ L++ + EIE+ VR++++
Sbjct: 302 ENVKDLLKEKQEMAREIEQKVRALVN 327
>gi|421852716|ref|ZP_16285401.1| DNA recombinase RecA [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
gi|371479047|dbj|GAB30604.1| DNA recombinase RecA [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
Length = 344
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A+ I +FGKGSV RLG + P+G L LD+ALG GGLP+GR+VE
Sbjct: 4 MDKAKALEGALGQIERAFGKGSVMRLGQRPKVEADVIPTGSLGLDIALGIGGLPRGRVVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK G +DAEHA DPSY+K LGVDV+NL++ QPD GE
Sbjct: 64 IYGPESSGKTTLALHAIAEAQKRDGTCAFIDAEHALDPSYAKKLGVDVDNLLISQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G +
Sbjct: 124 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVA 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IFLNQIR KIGV +GNPE T+GG ALKF++SVR++IR G IK DE G +
Sbjct: 184 RSNTLMIFLNQIRLKIGVMFGNPETTTGGNALKFYSSVRMDIRRIGSIKD--KDEVTGNQ 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D +V + GAW+SY QR+GQG
Sbjct: 242 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGAWFSYDSQRIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+LRD+P + +IE+ VR
Sbjct: 302 RENAKQFLRDHPEMAADIERRVR 324
>gi|347736632|ref|ZP_08869218.1| RecA protein [Azospirillum amazonense Y2]
gi|346919818|gb|EGY01190.1| RecA protein [Azospirillum amazonense Y2]
Length = 358
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+Q+ALDAA+ I +FGKGS+ +LG+ ++ V+ +G L LD+ALG GGLP+GRI+
Sbjct: 12 MDKQKALDAALGQIERAFGKGSIMKLGAKEASMEVDAISTGSLGLDIALGIGGLPRGRII 71
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG VDAEHA DPSY++ LGV+V++L+V QPD G
Sbjct: 72 EIYGPESSGKTTLALHAIAEAQKSGGTCAFVDAEHALDPSYARKLGVNVDDLLVSQPDAG 131
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+AL PRAE+EGE+G +GLQARLMSQALRK++ +
Sbjct: 132 EQALEITDTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTSSI 191
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +GNPE T+GG ALKF+AS+RL+IR G IK D VG
Sbjct: 192 SKSNCLVIFINQIRLKIGVMFGNPETTTGGNALKFYASIRLDIRRIGAIKDR--DNVVGN 249
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P++ EF+I++GEGVSK+G ++D +V + GAW+SY QR+GQ
Sbjct: 250 QTRVKVVKNKLAPPFRVVEFDIMYGEGVSKVGELIDLGIQAGVVEKSGAWFSYDGQRVGQ 309
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A Q+LR NP + + IE+ VR+
Sbjct: 310 GRENAKQFLRTNPAIAKAIEEKVRA 334
>gi|330813880|ref|YP_004358119.1| recombinase A [Candidatus Pelagibacter sp. IMCC9063]
gi|327486975|gb|AEA81380.1| RecA protein [Candidatus Pelagibacter sp. IMCC9063]
Length = 376
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ++LDAA++ I+S+FGKGSV +LG +E+ +G L+LD+ALG GGLPK RIVEI
Sbjct: 20 ERQKSLDAAISQIDSNFGKGSVMKLGQRQVMDIESISTGSLSLDIALGIGGLPKSRIVEI 79
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLAL IAE QK GG +DAEHA DPSY+K LGV+ +L++ QPD GE
Sbjct: 80 YGPESSGKTTLALQVIAEAQKSGGTCAFIDAEHALDPSYAKKLGVNTTDLLISQPDTGEQ 139
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGAI ++ VDSV+ALTPRAE+EGE+G +GLQARLMSQALRK++G+ SK
Sbjct: 140 ALEITDTLVRSGAISVLVVDSVAALTPRAELEGEMGDHHMGLQARLMSQALRKLTGSISK 199
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK GDE VG +
Sbjct: 200 SNTMVIFINQIRMKIGVMFGSPETTAGGNALKFYSSVRLDIRRIGAIKD--GDEIVGNQT 257
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+K EF+I++G+G+SKLG ++D DIV + GAWYSY +++GQG+
Sbjct: 258 RVKVVKNKVAPPFKVVEFDIMYGKGISKLGELIDLGAKADIVEKAGAWYSYKGEKIGQGK 317
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ + +YL +NP + EIE +R+
Sbjct: 318 ENSKEYLINNPKISAEIEMAIRA 340
>gi|405980807|ref|ZP_11039136.1| protein recA [Actinomyces neuii BVS029A5]
gi|404392826|gb|EJZ87883.1| protein recA [Actinomyces neuii BVS029A5]
Length = 364
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 245/322 (76%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +ALD A+ I+ +FGKGSV RLG V P+G L LD+ALG GGLP+GR+VEI
Sbjct: 7 DRSKALDVALAQIDKAFGKGSVMRLGDQTHRAVSVIPTGSLALDIALGVGGLPRGRVVEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y+K LGV+ ++L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPEYAKKLGVNTDDLLVAQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G S
Sbjct: 127 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALSA 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R KIGV++G+PE T+GG ALKF++SVRL+IR +I+++K VG +
Sbjct: 187 SGTTAIFINQLREKIGVFFGSPETTTGGKALKFYSSVRLDIR---RIETLKDAGAPVGNK 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++GEG+S+ G ++D IV + G+W++YG +LGQG
Sbjct: 244 TRVKVVKNKMAPPFKQAEFDILYGEGISREGSLIDMGVETGIVRKSGSWFTYGSDQLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
R+ Q+L+DNP L EIE+ +
Sbjct: 304 RENVRQFLKDNPELANEIERKI 325
>gi|374323542|ref|YP_005076671.1| recombinase A [Paenibacillus terrae HPL-003]
gi|357202551|gb|AET60448.1| RecA protein (Recombinase A) [Paenibacillus terrae HPL-003]
Length = 353
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 256/347 (73%), Gaps = 13/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I FGKGS+ +LG + VET PSG + LD+ALG GG P+GR++EI
Sbjct: 3 DRRAALDMALRQIEKQFGKGSIMKLGESTHMQVETSPSGSIALDIALGTGGFPRGRVIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKAGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +I+S+K G++ VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RIESLKMGNDIVGNR 239
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P++QAE +I++GEG+S+ G ++D DIV + GAWYSY +RLGQG
Sbjct: 240 TRIKVVKNKVAPPFRQAEVDIMYGEGISREGSLIDIGTEHDIVDKSGAWYSYEGERLGQG 299
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
R+ A Q+L++NP + IE+ +R + + V+ P +EE
Sbjct: 300 RENAKQFLKENPNIASTIEQKIRVA--------SNLITTVAPPTEEE 338
>gi|116333847|ref|YP_795374.1| recombinase A [Lactobacillus brevis ATCC 367]
gi|122269466|sp|Q03R29.1|RECA_LACBA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|116099194|gb|ABJ64343.1| RecA protein [Lactobacillus brevis ATCC 367]
gi|402830025|gb|AFR11462.1| recombinase [Lactobacillus brevis]
Length = 377
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ ALD A+ I FGKGS+ RLG VET PSG L LD+ALG GG P+GRIVEI
Sbjct: 4 ERQAALDKALKKIEKDFGKGSIMRLGDNSNLEVETVPSGSLALDVALGVGGYPRGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AEVQK GG A +DAE+A DP+Y+ ALGV++++L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAVAEVQKRGGTAAYIDAENALDPAYATALGVNIDDLLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
L+IAD + SGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 124 GLQIADALISSGAIDIVVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGTINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPE T GG ALKF+A+VRLE+R +IK G + +G R
Sbjct: 184 TKTIALFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQIKD--GTDVIGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+K+AE +I++G+G+S+ G +LD A DIV + G+WYSYG+ R+GQGR
Sbjct: 242 RIKVVKNKVAPPFKRAEVDIMYGQGISQTGELLDMAVEKDIVDKSGSWYSYGEDRIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A QYL D+P + E+ + VR+
Sbjct: 302 ENAKQYLADHPDMMAEVNQRVRA 324
>gi|423713065|ref|ZP_17687325.1| protein recA [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395424691|gb|EJF90871.1| protein recA [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 347
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKAKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK+GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDAIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHAEIATEIETALR 322
>gi|403069115|ref|ZP_10910447.1| recombinase A [Oceanobacillus sp. Ndiop]
Length = 347
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I FGKGSV +LG ++T PSG L LD+ALG GG P+GR++EI
Sbjct: 3 DRKQALDMALRQIEKQFGKGSVMKLGETPMQKLDTIPSGSLALDVALGIGGYPRGRVIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE QK GG A +DAEHA DP+Y++ALGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEAQKKGGQAAFIDAEHALDPTYARALGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQ+R KIGV +GNPE T GG ALKF++SVRLE+R +K +G+E VG +
Sbjct: 183 SHSTAIFINQVREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNEMVGNKA 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++GEG+SK G +LD +DIV + GAWYSY +RLGQGR
Sbjct: 241 RIKVVKNKVAPPFKQAEVDIMYGEGISKEGEILDVGSELDIVDKSGAWYSYNGERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A +LR+N + EI +R S
Sbjct: 301 ENAKIFLRENEDIMGEIHAAIRKHYS 326
>gi|323692880|ref|ZP_08107105.1| recA [Clostridium symbiosum WAL-14673]
gi|355622149|ref|ZP_09046545.1| RecA protein [Clostridium sp. 7_3_54FAA]
gi|323503055|gb|EGB18892.1| recA [Clostridium symbiosum WAL-14673]
gi|354823121|gb|EHF07460.1| RecA protein [Clostridium sp. 7_3_54FAA]
Length = 364
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/331 (56%), Positives = 254/331 (76%), Gaps = 6/331 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ I ++GKGSV +LG +G + +ET P+G L+LD+ALG GG+PKGRIVE
Sbjct: 5 DKMKALDAALTQIEKAYGKGSVMKLGDSGANMNIETVPTGSLSLDIALGLGGVPKGRIVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y++ +GVD++NL + QPDNGE
Sbjct: 65 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ CT+IF+NQ+R K+GV +GNPE T+GG ALKF++SVRL++R +K +G E +G R
Sbjct: 185 KSNCTVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRLDVRRIETLK--QGGEMIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VRV+V K+K++ P+K+AEF+I+FG+G+SK G +LD A DIV + GAWY+Y ++GQG
Sbjct: 243 VRVKVVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAAKEDIVEKSGAWYAYNGSKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSM--MSDG 416
R+ A +L N L EIE VR ++DG
Sbjct: 303 RENAKNFLLANQELCAEIETKVRQKYGLADG 333
>gi|323483876|ref|ZP_08089253.1| recA [Clostridium symbiosum WAL-14163]
gi|323402830|gb|EGA95151.1| recA [Clostridium symbiosum WAL-14163]
Length = 364
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/331 (56%), Positives = 254/331 (76%), Gaps = 6/331 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ I ++GKGSV +LG +G + +ET P+G L+LD+ALG GG+PKGRIVE
Sbjct: 5 DKMKALDAALTQIEKAYGKGSVMKLGDSGANMNIETVPTGSLSLDIALGLGGVPKGRIVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y++ +GVD++NL + QPDNGE
Sbjct: 65 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ CT+IF+NQ+R K+GV +GNPE T+GG ALKF++SVRL++R +K +G E +G R
Sbjct: 185 KSNCTVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRLDVRRIETLK--QGGEMIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VRV+V K+K++ P+K+AEF+I+FG+G+SK G +LD A DIV + GAWY+Y ++GQG
Sbjct: 243 VRVKVVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAAKEDIVEKSGAWYAYNGSKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSM--MSDG 416
R+ A +L N L EIE VR ++DG
Sbjct: 303 RENAKNFLLANQELCAEIETKVRQKYGLADG 333
>gi|440700380|ref|ZP_20882633.1| RecA protein [Streptomyces turgidiscabies Car8]
gi|440277032|gb|ELP65215.1| RecA protein [Streptomyces turgidiscabies Car8]
Length = 374
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 243/322 (75%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S+
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALSQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SQTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +L+DNP L EIEK +
Sbjct: 302 KENARNFLKDNPDLANEIEKKI 323
>gi|420155536|ref|ZP_14662396.1| RecA protein [Clostridium sp. MSTE9]
gi|394759022|gb|EJF41834.1| RecA protein [Clostridium sp. MSTE9]
Length = 470
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/340 (55%), Positives = 250/340 (73%), Gaps = 3/340 (0%)
Query: 72 FDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLT 131
F G V S +D+ +ALD A+ I FGKG+V RLG VE +G +
Sbjct: 74 FSGSVITILERRSFSMAVDKSKALDTALAQIEKQFGKGAVMRLGQNQAMQVEAISTGSFS 133
Query: 132 LDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKA 190
LD+ALG GGLP+GRIVE++GPESSGKTTLALH IA+ QK GG A +D EHA DP Y++A
Sbjct: 134 LDMALGIGGLPRGRIVEVYGPESSGKTTLALHCIAQGQKNGGYAAFIDVEHALDPVYARA 193
Query: 191 LGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGL 250
LGVDV+ L+V QPD GE ALEI + + RSGAID+I VDSV+AL PRAEIEG++G +GL
Sbjct: 194 LGVDVDALLVSQPDTGEQALEITEALVRSGAIDVIVVDSVAALVPRAEIEGDMGDSHVGL 253
Query: 251 QARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIR 310
QARLMSQALRK++G SK+ C IF+NQ+R K+GV YG+PEVT GG ALKF+ASVR++IR
Sbjct: 254 QARLMSQALRKLAGAISKSNCVAIFINQLREKVGVIYGSPEVTPGGRALKFYASVRIDIR 313
Query: 311 STGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIV 370
T +K+ G E +G R R +V K+K++ P+++AEF++++G+G+S+ G +LD A +DIV
Sbjct: 314 KTETLKN--GTEQIGSRTRAKVVKNKIAPPFREAEFDVMYGQGISREGEILDLAAKLDIV 371
Query: 371 VRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
+ GAW+SYG+ RLGQGRD + ++L+ NP L EIE+ +R
Sbjct: 372 QKSGAWFSYGETRLGQGRDNSKEFLKGNPELMAEIEQKLR 411
>gi|49475766|ref|YP_033807.1| recombinase A [Bartonella henselae str. Houston-1]
gi|59798263|sp|Q6G2Z3.1|RECA_BARHE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49238573|emb|CAF27814.1| recA protein [Bartonella henselae str. Houston-1]
Length = 347
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKIKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + V + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGTVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++P + EIE +R
Sbjct: 299 GRENAKQFLREHPEIATEIETALR 322
>gi|344202749|ref|YP_004787892.1| protein recA [Muricauda ruestringensis DSM 13258]
gi|343954671|gb|AEM70470.1| Protein recA [Muricauda ruestringensis DSM 13258]
Length = 335
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 247/325 (76%), Gaps = 2/325 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G + VE PSG L LD+ALG GG P+GR++EI+
Sbjct: 8 KLKALKLTLDKLDKTYGKGAVMKMGDSVVEDVEVIPSGSLGLDIALGVGGYPRGRVIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y+K LGVD++NLI+ QPD+GE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAKKLGVDIDNLIISQPDHGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI + + RSGAID++ VDSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ SK
Sbjct: 128 LEITENLIRSGAIDIVIVDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTSTISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IKS GD G + R
Sbjct: 188 KCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKSTDGDVQ-GNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P+K AEF+I++GEG+SK+G +LD +IV + G+W+SYGD +LGQGRD
Sbjct: 247 VKVVKNKVAPPFKTAEFDIMYGEGISKIGEILDLGVAYEIVKKSGSWFSYGDTKLGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMS 414
L DNP L EE+E ++ ++
Sbjct: 307 AVKSLLMDNPELSEELEAKIKEAIT 331
>gi|403530664|ref|YP_006665193.1| recombinase A [Bartonella quintana RM-11]
gi|403232735|gb|AFR26478.1| recombinase A [Bartonella quintana RM-11]
Length = 347
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGSIKD--RDMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + IV + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHAEIATEIETALR 322
>gi|363580995|ref|ZP_09313805.1| recombinase A [Flavobacteriaceae bacterium HQM9]
Length = 338
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/328 (56%), Positives = 250/328 (76%), Gaps = 2/328 (0%)
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
S D D+ +AL+ + ++ ++GKG+V ++G A V+T +G L LDLALG GGLP
Sbjct: 2 SADKEKDDKLKALELTLAKLDKAYGKGAVMKMGDAAIVEVDTISTGSLGLDLALGVGGLP 61
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
+GR++EIFGPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVD+ENL++
Sbjct: 62 RGRVIEIFGPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAQKLGVDIENLVIS 121
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPDNGE ALEIAD + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK
Sbjct: 122 QPDNGEQALEIADNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRK 181
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
++ +K CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK+ G
Sbjct: 182 LTSTINKTNCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKNSNG- 240
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E G + RV+V K+KV+ P++ AEF+I++GEGVSK+G ++D +IV + G+W+SY D
Sbjct: 241 EVQGNKTRVKVVKNKVAPPFRTAEFDIMYGEGVSKVGEIIDIGVDYEIVKKSGSWFSYMD 300
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVV 409
+LGQGRD + L DNP L EE+E+ +
Sbjct: 301 SKLGQGRDAVKKLLLDNPELMEELEEKI 328
>gi|390934944|ref|YP_006392449.1| protein recA [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|300390225|gb|ADK10925.1| RecA [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570445|gb|AFK86850.1| Protein recA [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 343
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 247/324 (76%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+ALD A++ I FGKGS+ RLG ++ +G + LD+ALG GG+P+GRI+
Sbjct: 1 MIEKQKALDMAISQIERQFGKGSIMRLGDNSKLNIDVISTGSIDLDIALGVGGVPRGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTT+ALH +AE QKLGG +DAEHA DP Y+K +GV+++NL+V QPD G
Sbjct: 61 EIFGPESSGKTTIALHILAEAQKLGGTGAFIDAEHALDPVYAKNVGVNIDNLLVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D+I +DSV+AL P+AEI+G++G +GLQARLMSQALRK+SG
Sbjct: 121 EQALEIVEALVRSGAVDVIVIDSVAALVPKAEIDGDMGDAHVGLQARLMSQALRKLSGVI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK +F+NQ+R K+GV +GNPE T GG ALKF++++RL++R IK +G++ VG
Sbjct: 181 SKTKSVAVFINQLREKVGVMFGNPETTPGGRALKFYSTIRLDVRKVDGIK--QGNDIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P+KQAEF+I++GEG+S+ G +LD A +DI+ + GAWYSYGD RLGQ
Sbjct: 239 RTRVKVVKNKVAPPFKQAEFDIMYGEGISREGSILDLAASIDIIDKSGAWYSYGDIRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL++N + +EIE +R
Sbjct: 299 GRENAKQYLKENKAIADEIENKIR 322
>gi|297571228|ref|YP_003697002.1| recA protein [Arcanobacterium haemolyticum DSM 20595]
gi|296931575|gb|ADH92383.1| recA protein [Arcanobacterium haemolyticum DSM 20595]
Length = 348
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/332 (57%), Positives = 249/332 (75%), Gaps = 8/332 (2%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R +AL+ A+ I+ FGKGS RLG A V P+G L LD+ALG GGLP+GR+VEI+
Sbjct: 9 RAKALETALGQIDRQFGKGSAMRLGDAPPQRVSVIPTGSLALDVALGIGGLPRGRVVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHA+A QK GG A VDAEHA DP Y++ LGVD + LIV QPD GE A
Sbjct: 69 GPESSGKTTVALHAVANAQKAGGIAAFVDAEHALDPEYARKLGVDTDALIVSQPDTGEQA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S A
Sbjct: 129 LEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSAA 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVRV 328
G T IF+NQ+R KIGV+YGNPE T+GG ALKF+ASVRL++R +I+++K G VG R
Sbjct: 189 GTTAIFINQLREKIGVFYGNPETTTGGKALKFYASVRLDVR---RIETLKEGSTPVGNRT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++G+G+S G ++D A IV R G+WY+Y +LGQG+
Sbjct: 246 RVKVVKNKMAPPFKQAEFDILYGKGISTEGGIIDLAVDTGIVRRSGSWYTYEGDQLGQGK 305
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM---SDGS 417
+KA Q+L DNP + +EIE+ V + + DGS
Sbjct: 306 EKARQFLLDNPEISDEIERKVLATIGINKDGS 337
>gi|393718758|ref|ZP_10338685.1| recombinase A [Sphingomonas echinoides ATCC 14820]
Length = 367
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/333 (56%), Positives = 247/333 (74%), Gaps = 3/333 (0%)
Query: 80 SSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-G 138
S D +R +AL+AA+ I+ +FGKGS +LGS VE +G L LD+ALG G
Sbjct: 15 SDKQADKATAERAKALEAALAQIDRAFGKGSAMKLGSKQTMQVEVISTGSLGLDIALGVG 74
Query: 139 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENL 198
GLP+GR++EI+GPESSGKTTLALH IAE QK GG A VDAEHA DP Y+K LGV+++ L
Sbjct: 75 GLPRGRVIEIYGPESSGKTTLALHVIAEAQKGGGTAAFVDAEHALDPVYAKKLGVNIDEL 134
Query: 199 IVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 258
IV QPD GE ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+
Sbjct: 135 IVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQS 194
Query: 259 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318
LRK++G+ S++ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK
Sbjct: 195 LRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKD- 253
Query: 319 KGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYS 378
DE +G RV+V K+KV+ P+KQ EF+I++G+GVSK+G +LD +V + GAW+S
Sbjct: 254 -RDEIIGNTTRVKVVKNKVAPPFKQVEFDIMYGQGVSKIGEILDLGVKAGLVEKSGAWFS 312
Query: 379 YGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
Y R+GQGR+ A +L++N + + +EK +R+
Sbjct: 313 YDSVRIGQGRENAKTFLKENVEMSDRLEKAIRA 345
>gi|384097080|ref|ZP_09998201.1| recombinase A [Imtechella halotolerans K1]
gi|383837048|gb|EID76448.1| recombinase A [Imtechella halotolerans K1]
Length = 335
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/324 (55%), Positives = 247/324 (76%), Gaps = 2/324 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V +LG + VE P+G + LD+ALG GG P+GRI+EI+
Sbjct: 8 KLKALKLTLDKLDKTYGKGAVMKLGDSAVEQVEVIPTGSIGLDIALGVGGYPRGRIIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAESQKAGGIAAFIDAEHAFDRFYAEKLGVDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAIDL+ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ +K
Sbjct: 128 LEIADNLIRSGAIDLVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTATINKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G E G + R
Sbjct: 188 RCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDTDG-EAAGNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P+K AEF+I+FGEG+SK+G ++D +I+ + G+W+SYGD +LGQGRD
Sbjct: 247 VKVVKNKVAPPFKSAEFDIMFGEGISKIGEIIDIGVEYEIIKKSGSWFSYGDTKLGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMM 413
L+DNP L EE++ +R +
Sbjct: 307 AVKTLLQDNPELFEELDVKIREAL 330
>gi|86357938|ref|YP_469830.1| recombinase A [Rhizobium etli CFN 42]
gi|123751994|sp|Q2K7T3.1|RECA_RHIEC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|86282040|gb|ABC91103.1| recombinase A protein [Rhizobium etli CFN 42]
gi|388603163|gb|AFK76186.1| recombinase A [Rhizobium etli]
Length = 362
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G G+QARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELALR 335
>gi|207366314|emb|CAQ58052.1| recombinase A [Agrobacterium tumefaciens]
gi|207366316|emb|CAQ58053.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/320 (59%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIV
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIV 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPETANEIE 320
>gi|383641612|ref|ZP_09954018.1| recombinase A [Sphingomonas elodea ATCC 31461]
Length = 356
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/322 (58%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+Q+ALDAA+ I+ +FGKGS RLGS VE +G L LD+ALG GGLP+GR++E+
Sbjct: 17 DKQKALDAALAQIDRAFGKGSAMRLGSKETMQVEAISTGSLGLDIALGVGGLPRGRVIEV 76
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH IAE QK GG A VDAEHA DP Y+K LGV+++ LIV QPD GE
Sbjct: 77 YGPESSGKTTLALHVIAEAQKNGGVAAFVDAEHALDPVYAKKLGVNIDELIVSQPDTGEQ 136
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ S+
Sbjct: 137 ALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISR 196
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE +G
Sbjct: 197 SRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR--DEIIGNAT 254
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + GAW+SY R+GQGR
Sbjct: 255 RVKVVKNKVAPPFKQVEFDIMYGEGISKIGEILDLGVKAGLVEKSGAWFSYDSIRIGQGR 314
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ + +LR+NP + +E +R
Sbjct: 315 ENSKNFLRENPEVCARLEAAIR 336
>gi|347532069|ref|YP_004838832.1| recombinase A [Roseburia hominis A2-183]
gi|345502217|gb|AEN96900.1| recombinase A [Roseburia hominis A2-183]
Length = 371
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 252/327 (77%), Gaps = 4/327 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA++ I +GKGSV +LG + VE P+G L+LDLALG GGLPKGRI+E
Sbjct: 18 EKLKALDAAISHIEKQYGKGSVMKLGDNSAHMNVEAVPTGSLSLDLALGIGGLPKGRIIE 77
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHA+AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPD GE
Sbjct: 78 IYGPESSGKTTVALHAVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDCGE 137
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ M RSGA+D++ VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 138 QALEIAETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTSIVS 197
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R KIGV +GNPE T+GG ALKF++SVRL++R +K +G E VG
Sbjct: 198 KSNCIVIFINQLREKIGVMFGNPETTTGGRALKFYSSVRLDVRRVEALK--QGGEVVGNH 255
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P+K+AEF+I+FG+G+SK G +LD A I+ + GAWY+Y +++GQG
Sbjct: 256 TRVKIVKNKVAPPFKEAEFDIMFGQGISKEGDILDLAADAGIINKSGAWYAYNGEKIGQG 315
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMS 414
R+ A YL++NPL+ EE+E VR+ S
Sbjct: 316 RENAKNYLKENPLICEEVEAKVRAKYS 342
>gi|433463722|ref|ZP_20421264.1| recombinase A [Halobacillus sp. BAB-2008]
gi|432187164|gb|ELK44491.1| recombinase A [Halobacillus sp. BAB-2008]
Length = 347
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I FGKGS+ +LG + V T SG L LD+ALG GG P+GRI+EI
Sbjct: 3 DRKQALDMALRQIEKQFGKGSIMKLGESAEQRVNTVSSGSLALDVALGVGGYPRGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE Q+ GG A +DAEHA DP Y++ALGVD+E L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEAQRKGGQAAFIDAEHALDPVYARALGVDIEELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDMVVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K +G+E VG +
Sbjct: 183 SKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNEMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++GEG+S+ G ++D +D++ + G+WYSY ++RLGQGR
Sbjct: 241 RLKVVKNKVAPPFKQAEVDIMYGEGISREGELIDIGTDLDLIQKSGSWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++N + +E+++++R
Sbjct: 301 ENAKQFLKENVEIYDEVKRLIR 322
>gi|420244107|ref|ZP_14747942.1| protein RecA [Rhizobium sp. CF080]
gi|398056095|gb|EJL48120.1| protein RecA [Rhizobium sp. CF080]
Length = 362
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/328 (58%), Positives = 250/328 (76%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L+LD+ALG GGLPK
Sbjct: 10 EDKGVDKSKALEAALSQIERSFGKGSIMKLGSNENIVEIETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKIFLRDNPELAREIETSLR 335
>gi|254502491|ref|ZP_05114642.1| protein RecA [Labrenzia alexandrii DFL-11]
gi|222438562|gb|EEE45241.1| protein RecA [Labrenzia alexandrii DFL-11]
Length = 355
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 250/327 (76%), Gaps = 3/327 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
+S +D+ +ALDAA++ I +FGKGS+ R+G V++ +G L LD+ALG GGLPKG
Sbjct: 10 ESSQMDKTKALDAALSQIERAFGKGSIMRMGQGQVVEVQSVSTGSLGLDIALGIGGLPKG 69
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RIVEI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGVD++NL++ QP
Sbjct: 70 RIVEIYGPESSGKTTLALHTVAEAQKTGGICAFIDAEHALDPIYARKLGVDIDNLLISQP 129
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEIAD + RSGAID++ +DSV+ALTP+AE+EGE+G G+QARLMSQALRK++
Sbjct: 130 DAGEQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLT 189
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
+ SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE
Sbjct: 190 ASISKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKD--KDEV 247
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
VG + RV+V K+K++ P++Q EF+II+GEGVSK+G ++D IV + GAW+SY QR
Sbjct: 248 VGNQTRVKVVKNKLAPPFRQVEFDIIYGEGVSKMGELIDLGVKGGIVEKSGAWFSYNSQR 307
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVR 410
LGQGR+ + Q+LR+N + +EIE +R
Sbjct: 308 LGQGRENSKQFLRENKEIADEIELSIR 334
>gi|410458677|ref|ZP_11312434.1| recombinase A [Bacillus azotoformans LMG 9581]
gi|409931027|gb|EKN68015.1| recombinase A [Bacillus azotoformans LMG 9581]
Length = 347
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ DI FGKGS+ +LG + T SG L LD+ALG GG P+GRI+E+
Sbjct: 3 DRKAALERALKDIEKQFGKGSIMKLGEQAERKLATVSSGSLALDIALGVGGYPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ LHAIAEVQKLGG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVTLHAIAEVQKLGGTAAFIDAEHALDPVYAEKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIADALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R KIGV +GNPE T+GG ALKF++S+RLE+R IK +G+E VG +
Sbjct: 183 SKTIAIFINQVREKIGVMFGNPETTTGGRALKFYSSIRLEVRRAETIK--QGNEMVGSKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+++ G ++D A +DI+ + GAWYSY ++RLGQGR
Sbjct: 241 KIKVVKNKVAPPFKTAEVDIMYGEGITREGELIDIASELDIIQKSGAWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A Q+L++NP L EI +VR+
Sbjct: 301 ENAKQFLKENPDLYVEIRDLVRA 323
>gi|336172228|ref|YP_004579366.1| protein recA [Lacinutrix sp. 5H-3-7-4]
gi|334726800|gb|AEH00938.1| Protein recA [Lacinutrix sp. 5H-3-7-4]
Length = 334
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/326 (56%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++ A VE PSG L LD+ALG GG P+GR++EI+
Sbjct: 8 KLKALKLTLDKLDKAYGKGTVMKMSDAAVVDVEAIPSGSLGLDIALGVGGYPRGRVIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAEKLGVDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ VDSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ + SK
Sbjct: 128 LEIADNLIRSGAIDIVVVDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTASISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IKS G E G + R
Sbjct: 188 NCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKSTDG-EVRGNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P+K AEF+I++GEGVSK+G +LD A +IV + G+W+SY D +LGQGRD
Sbjct: 247 VKVVKNKVAPPFKLAEFDIMYGEGVSKVGEILDVAVEKEIVKKSGSWFSYEDTKLGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSD 415
++DNP L +E+E+ ++ + +
Sbjct: 307 AVKAIIKDNPELFDELEQKIKKAIKE 332
>gi|407473997|ref|YP_006788397.1| recombinase A [Clostridium acidurici 9a]
gi|407050505|gb|AFS78550.1| recombinase A [Clostridium acidurici 9a]
Length = 357
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+ A++ I FGKGS+ LG VE +G L LD+A+G GG P+GRI+EI
Sbjct: 3 EKAKALEMAISQIEKQFGKGSIMTLGEESKLNVEAVSTGALDLDIAIGIGGFPRGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE QK+GG A +DAEHA DP Y+K LGVD+ENLIV QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEHQKIGGVAAFIDAEHALDPQYAKNLGVDIENLIVSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G +
Sbjct: 123 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGAIKR 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL++R +K +G+E +G R
Sbjct: 183 SNTTAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDVRRIEALK--QGEEVIGSRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++G G+S+ G +LD DI+ + G+WYSYG RLGQGR
Sbjct: 241 RIKVVKNKVAAPFKQAEVDIMYGTGISREGNILDVGANCDIINKSGSWYSYGSHRLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ + ++LRDNP + +EI+K +R
Sbjct: 301 ENSKEFLRDNPDVTKEIDKKIR 322
>gi|418991149|ref|ZP_13538810.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1096]
gi|377723271|gb|EHT47396.1| protein RecA [Staphylococcus aureus subsp. aureus CIG1096]
Length = 347
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/334 (55%), Positives = 252/334 (75%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V T +G +TLD ALG GG PKGRI+EI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D DIV + GAWYSY +R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM--SDGSVHQ 420
+ +L++NP ++EEI++ +R + SDG V +
Sbjct: 302 ENVKMFLKENPQIKEEIDRKLREKLGISDGDVEE 335
>gi|229828465|ref|ZP_04454534.1| hypothetical protein GCWU000342_00527 [Shuttleworthia satelles DSM
14600]
gi|229793059|gb|EEP29173.1| hypothetical protein GCWU000342_00527 [Shuttleworthia satelles DSM
14600]
Length = 376
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/323 (56%), Positives = 251/323 (77%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++Q+AL+AA+ I +G+GSV +LG + VE +G ++LDLALG GGLPKGRI+E
Sbjct: 39 EKQKALEAAITHIEKQYGRGSVMKLGEGSQRMKVEAVSTGSISLDLALGVGGLPKGRIIE 98
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTT+ALH ++EVQK GG A +DAEHA DP Y++ +GVD++NL + QPDNGE
Sbjct: 99 IFGPESSGKTTVALHCVSEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGE 158
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ M RSGA+D+I VDSV+AL P+AEIEG++G +GLQARLMSQALRK++ S
Sbjct: 159 QALEIAETMVRSGAVDIIVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTSVVS 218
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+ C +IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL++R T IK +G + VG
Sbjct: 219 RTNCIVIFINQLREKIGVMFGNPETTTGGRALKFYASVRLDVRRTEAIK--QGGDVVGNH 276
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P+KQAEF+I+FG+G+S+ G +LD A +DI+ + GAWY+Y +++GQG
Sbjct: 277 TRVKIVKNKVAPPFKQAEFDIMFGQGISRSGDILDLAVDIDIINKSGAWYAYEGEKIGQG 336
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +YL ++P L E IE+++R
Sbjct: 337 RENAKKYLEEHPELMERIEQLIR 359
>gi|340027698|ref|ZP_08663761.1| recombinase A [Paracoccus sp. TRP]
Length = 356
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 249/332 (75%), Gaps = 4/332 (1%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GG 139
D D R D+Q+ALD+A+ I FGKGS+ RLG+ A +E +G L LD+ALG GG
Sbjct: 8 DMNDKRSADKQKALDSALAQIERQFGKGSIMRLGADSPVAEIEATSTGSLGLDIALGIGG 67
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
LPKGRI+E+FGPESSGKTTL LH +AE QK GG VDAEHA DP Y+K LGV++++L+
Sbjct: 68 LPKGRIIEVFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDDLL 127
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
+ QPD GE ALEI D + RSGA+ L+ VDSV+ALTP++EIEG++G Q+G QARLMSQA+
Sbjct: 128 ISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAM 187
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK++ + ++ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG IK
Sbjct: 188 RKLTASIGRSNCMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDR- 246
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
DE +G RV+V K+KV+ P++Q EF+I++GEG+SK+G ++D +V + G+WYSY
Sbjct: 247 -DEVIGNTTRVKVVKNKVAPPFRQVEFDIMYGEGISKVGELIDLGIKAGVVEKSGSWYSY 305
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
GD+R+GQGR+ A QYLRD+P + IE +R+
Sbjct: 306 GDERIGQGRENAKQYLRDHPDVAYAIEDKIRA 337
>gi|23099079|ref|NP_692545.1| recombinase A [Oceanobacillus iheyensis HTE831]
gi|30173249|sp|Q8CXG7.1|RECA_OCEIH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|22777307|dbj|BAC13580.1| multifunctional protein involved in homologous recombination
(recombinase) [Oceanobacillus iheyensis HTE831]
Length = 347
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I FGKGS+ ++G + T PSG L LD+ALG GG P+GR+VEI
Sbjct: 3 DRKQALDMALRQIEKQFGKGSIMKMGENEIPKIATIPSGSLALDVALGIGGYPRGRVVEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE QK GG A +DAEHA DP Y+KALGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K G++ VG +
Sbjct: 183 SKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKL--GNDAVGNKA 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++G+G+SK G +LD +DIV++ GAWYSY + RLGQGR
Sbjct: 241 RIKVVKNKVAPPFKQAEVDIMYGKGISKEGEVLDIGSDLDIVMKSGAWYSYNNDRLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL+++ + EI + +R
Sbjct: 301 ENAKQYLKEHEEVLTEIHQSIR 322
>gi|373109237|ref|ZP_09523516.1| protein recA [Myroides odoratimimus CCUG 10230]
gi|423129095|ref|ZP_17116770.1| protein recA [Myroides odoratimimus CCUG 12901]
gi|423132754|ref|ZP_17120401.1| protein recA [Myroides odoratimimus CIP 101113]
gi|423328364|ref|ZP_17306171.1| protein recA [Myroides odoratimimus CCUG 3837]
gi|371645235|gb|EHO10761.1| protein recA [Myroides odoratimimus CCUG 10230]
gi|371649471|gb|EHO14949.1| protein recA [Myroides odoratimimus CCUG 12901]
gi|371649921|gb|EHO15396.1| protein recA [Myroides odoratimimus CIP 101113]
gi|404604800|gb|EKB04416.1| protein recA [Myroides odoratimimus CCUG 3837]
Length = 334
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/321 (55%), Positives = 247/321 (76%), Gaps = 3/321 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V +LG VE SG L +DLALG GG P+GRI+EI+
Sbjct: 8 KLKALQLTLDKLDKTYGKGTVMKLGDTAVEEVEVISSGSLGIDLALGVGGFPRGRIIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAQKLGVDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIA+ + RSGAIDL+ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ SK
Sbjct: 128 LEIAENLIRSGAIDLVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTSTISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+ F+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G+ +G R +
Sbjct: 188 NCTVFFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRKSTQIKD--GENVIGNRTK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P++ AEF+I++GEG+SK+G +LD A +IV + G+W+SYGD +LGQGRD
Sbjct: 246 VKIVKNKVAPPFRTAEFDIMYGEGISKVGEVLDMAVDYEIVKKSGSWFSYGDTKLGQGRD 305
Query: 390 KALQYLRDNPLLQEEIEKVVR 410
++DNP L EE+E++++
Sbjct: 306 AVKSVIKDNPELMEELEQLIK 326
>gi|402298054|ref|ZP_10817778.1| recombinase A [Bacillus alcalophilus ATCC 27647]
gi|401726698|gb|EJS99914.1| recombinase A [Bacillus alcalophilus ATCC 27647]
Length = 349
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 253/347 (72%), Gaps = 11/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R+ ALD A+ I FGKGS+ +LG V T SG L LD+ALG GG P+GRI+E+
Sbjct: 3 ERKAALDMALRQIEKQFGKGSIMKLGEQTDQRVSTISSGSLALDIALGVGGYPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQRTGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAVNK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +F+NQ+R KIGV +GNPE T GG ALKF++SVRLE+R +K +G+E VG +
Sbjct: 183 SKTIAVFINQVREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNEMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+KQAE +I++GEG+S+ G +LD A +DIV + GAWYSY ++RLGQGR
Sbjct: 241 KIKVVKNKVAPPFKQAEVDIMYGEGISREGSILDIAAELDIVQKSGAWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS-DGSVHQGSFLRNVSLPNQEE 434
+ A Q+ ++N L EE+E+ +R DG + V P +EE
Sbjct: 301 ENAKQFFKENGNLTEEVERKIRQHHGLDGEIL-------VDAPTEEE 340
>gi|329114759|ref|ZP_08243516.1| Protein RecA [Acetobacter pomorum DM001]
gi|326695890|gb|EGE47574.1| Protein RecA [Acetobacter pomorum DM001]
Length = 367
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/323 (56%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A+ I +FGKGSV RLG + P+G L LD+ALG GGLP+GR+VE
Sbjct: 27 MDKAKALEGALGQIERAFGKGSVMRLGQRPKVEADVIPTGSLGLDIALGIGGLPRGRVVE 86
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y+K LGVDV+NL++ QPD GE
Sbjct: 87 IYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYAKKLGVDVDNLLISQPDAGE 146
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G +
Sbjct: 147 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVA 206
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IFLNQIR KIGV +GNPE T+GG ALKF++SVR++IR G IK DE G +
Sbjct: 207 RSNTLMIFLNQIRLKIGVMFGNPETTTGGNALKFYSSVRMDIRRIGSIKD--KDEVTGNQ 264
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D +V + G+W+SY QR+GQG
Sbjct: 265 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGSWFSYDSQRIGQG 324
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+LRD+P + +IE+ VR
Sbjct: 325 RENAKQFLRDHPEMAADIERRVR 347
>gi|222086163|ref|YP_002544695.1| recombinase A [Agrobacterium radiobacter K84]
gi|254790417|sp|B9JFS7.1|RECA_AGRRK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|221723611|gb|ACM26767.1| recombinase A protein [Agrobacterium radiobacter K84]
Length = 361
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPDLAREIELSLR 335
>gi|254419524|ref|ZP_05033248.1| protein RecA [Brevundimonas sp. BAL3]
gi|196185701|gb|EDX80677.1| protein RecA [Brevundimonas sp. BAL3]
Length = 359
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 251/327 (76%), Gaps = 4/327 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGA-LVETFPSGCLTLDLALG-GGLPKGRIVE 147
D+QRAL+AA+ I+ +FGKGSV +LG G A ++ + +G L LD+ALG GGLP+GR++E
Sbjct: 15 DKQRALEAAIAQIDRAFGKGSVMKLGKGGVADVIPSVSTGSLGLDMALGIGGLPRGRVIE 74
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
+FGPESSGKTTLALH +AEVQK GG A VDAEHA DP Y++ LGV++++L+V QPD GE
Sbjct: 75 VFGPESSGKTTLALHTVAEVQKAGGTAAFVDAEHALDPGYAQKLGVNLDDLLVSQPDTGE 134
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + S
Sbjct: 135 QALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASIS 194
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C ++F+NQIR+KIGV YG+PE T+GG ALKF+ASVRL+IR TG IK+ DE VG
Sbjct: 195 KSNCIVLFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGAIKNR--DEVVGNT 252
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+++ F+I++GEG+SKLG ++D ++ + G+W+SY R+GQG
Sbjct: 253 TRVKVVKNKVAPPFREVIFDIMYGEGISKLGEIIDLGVKAGVIEKSGSWFSYDSTRIGQG 312
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMS 414
R+ ++L+ NP + IEK VR+ S
Sbjct: 313 RENVREFLKQNPDIAASIEKAVRASTS 339
>gi|333897098|ref|YP_004470972.1| recombinase A [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112363|gb|AEF17300.1| Protein recA [Thermoanaerobacterium xylanolyticum LX-11]
Length = 343
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 246/324 (75%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+ALD A++ I FGKGS+ RLG ++ +G + LD+ALG GG+P+GRI+
Sbjct: 1 MIEKQKALDMAISQIERQFGKGSIMRLGDNSKLNIDVISTGSIDLDIALGVGGVPRGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTT+ALH +AE QKLGG +DAEHA DP Y+K +GV ++NL+V QPD G
Sbjct: 61 EIFGPESSGKTTIALHILAEAQKLGGTGAFIDAEHALDPVYAKNVGVKIDNLLVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D+I +DSV+AL P+AEI+G++G +GLQARLMSQALRK+SG
Sbjct: 121 EQALEIVEALVRSGAVDVIVIDSVAALVPKAEIDGDMGDAHVGLQARLMSQALRKLSGVI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK +F+NQ+R K+GV +GNPE T GG ALKF++++RL++R IK +G++ VG
Sbjct: 181 SKTKSVAVFINQLREKVGVMFGNPETTPGGRALKFYSTIRLDVRKVDGIK--QGNDIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P+KQAEF+I++GEG+S+ G +LD A +DI+ + GAWYSYGD RLGQ
Sbjct: 239 RTRVKVVKNKVAPPFKQAEFDIMYGEGISREGSILDLAASIDIIDKSGAWYSYGDIRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL++N + +EIE +R
Sbjct: 299 GRENAKQYLKENKAIADEIENKIR 322
>gi|378826124|ref|YP_005188856.1| recombinase A [Sinorhizobium fredii HH103]
gi|365179176|emb|CCE96031.1| RecA protein [Sinorhizobium fredii HH103]
Length = 361
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSKDSVIEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+AL PRAEIEGE+G G+QARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPDLLREIEMALR 335
>gi|209884571|ref|YP_002288428.1| recombinase A [Oligotropha carboxidovorans OM5]
gi|337741760|ref|YP_004633488.1| recombinase A [Oligotropha carboxidovorans OM5]
gi|386030776|ref|YP_005951551.1| recombinase A [Oligotropha carboxidovorans OM4]
gi|209872767|gb|ACI92563.1| protein RecA [Oligotropha carboxidovorans OM5]
gi|336095844|gb|AEI03670.1| recombinase A [Oligotropha carboxidovorans OM4]
gi|336099424|gb|AEI07247.1| recombinase A [Oligotropha carboxidovorans OM5]
Length = 360
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV RLG ++ +E SG L LD+ALG GGLPKGRIV
Sbjct: 14 MDKTKALTAALSQIERQFGKGSVMRLGKNDRSMDIEVISSGSLGLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHA+AE QK GG +DAEHA DP Y++ LGV+V++L++ QPD+G
Sbjct: 74 EIYGPESSGKTTLALHAVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ VDSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR TG IK + DE +G
Sbjct: 194 NKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRTGAIK--ERDEVIGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD IV + GAW+SY QRLGQ
Sbjct: 252 STRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LRDNP + +IE +R
Sbjct: 312 GRENAKSFLRDNPDMVAKIEAAIR 335
>gi|365824587|ref|ZP_09366661.1| recA [Actinomyces graevenitzii C83]
gi|365259647|gb|EHM89632.1| recA [Actinomyces graevenitzii C83]
Length = 394
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 246/328 (75%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL A+ I+ +FGKGSV RLG V P+G + LD+ALG GGLP+GR+VEI
Sbjct: 8 DRAKALSLALAQIDKNFGKGSVMRLGDDTRPPVAVIPTGSVALDVALGVGGLPRGRVVEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ LGVDV+NL+V QPD GE
Sbjct: 68 YGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPEYARKLGVDVDNLLVSQPDTGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG +D+I +DSV+AL P+AEI+GE+G +GLQARLMSQALRK++G S
Sbjct: 128 ALEIADMLIRSGGLDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKITGALSA 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR G +K GD+ VG R
Sbjct: 188 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDIRRIGALKD--GDQTVGNRT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+K AEF+I++GEG+S+ G +LD +V + GAWY+YG +LGQG+
Sbjct: 246 KVKVVKNKMAPPFKVAEFDILYGEGISREGGLLDLGVDTGVVRKSGAWYTYGTDQLGQGK 305
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ + +L+DNP L EIE+ + + + G
Sbjct: 306 ENSRNFLKDNPQLAAEIEEKILAALGVG 333
>gi|347753713|ref|YP_004861278.1| recombination protein RecA [Bacillus coagulans 36D1]
gi|347586231|gb|AEP02498.1| Protein recA [Bacillus coagulans 36D1]
Length = 355
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/335 (54%), Positives = 247/335 (73%), Gaps = 6/335 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ ALD A+ I FGKGS+ RLG +V T P+G L LD+ALG GG P+GR++EI
Sbjct: 3 DRQEALDKALKQIEKQFGKGSIMRLGEQTDRVVSTIPTGSLALDIALGVGGYPRGRVIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQAQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIVVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPEVT GG ALKF++SVRLE+R +IK +G + VG +
Sbjct: 183 SNTIAIFINQIREKVGVMFGNPEVTPGGRALKFYSSVRLEVRRAEQIK--QGSDIVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+SK G ++D +DI+ + GAWY+Y +RLGQGR
Sbjct: 241 KIKVVKNKVAPPFKTAEVDIMYGEGISKEGEIVDMGSDLDIIQKSGAWYAYNGERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRS---MMSDGSVHQ 420
+ A Q+L++N L+ EI +R + D H+
Sbjct: 301 ENAKQFLKENADLKNEIAAKIREHYDLTEDAGSHE 335
>gi|395790914|ref|ZP_10470373.1| protein recA [Bartonella alsatica IBS 382]
gi|395409210|gb|EJF75809.1| protein recA [Bartonella alsatica IBS 382]
Length = 347
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA+ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALLQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHAEIATEIETALR 322
>gi|187935438|ref|YP_001885485.1| recombinase A [Clostridium botulinum B str. Eklund 17B]
gi|238691622|sp|B2TJ69.1|RECA_CLOBB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|187723591|gb|ACD24812.1| protein RecA [Clostridium botulinum B str. Eklund 17B]
Length = 356
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 242/323 (74%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+++ +A++ AM I FGKGSV +LG ++ +GCL LD+ALG GG+PKGRIVE
Sbjct: 6 INKLKAIENAMGQIEKQFGKGSVMKLGENSVLNIDAISTGCLDLDIALGIGGVPKGRIVE 65
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH AE QK GG +DAEHA DPSY++ LGVD ENLIV QPD GE
Sbjct: 66 IYGPESSGKTTIALHIAAEAQKKGGAVGFIDAEHALDPSYARNLGVDTENLIVSQPDTGE 125
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
LEIA+ + RSGAID+I VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G S
Sbjct: 126 QGLEIAEALVRSGAIDVIIVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGTIS 185
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K C IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL++R IK +GD VG R
Sbjct: 186 KTNCIAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDVRRIDSIK--QGDGIVGNR 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAEF+I++ EG+S+ G ++D +IV + GAW+SYGD RLGQG
Sbjct: 244 TRIKVTKNKVAPPFKQAEFDIMYNEGISRQGNIVDVGVKEEIVQKSGAWFSYGDIRLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A QYL++NP + +IE +R
Sbjct: 304 RENAKQYLKENPEVALDIENQIR 326
>gi|164688502|ref|ZP_02212530.1| hypothetical protein CLOBAR_02147 [Clostridium bartlettii DSM
16795]
gi|164602915|gb|EDQ96380.1| RecA protein [Clostridium bartlettii DSM 16795]
Length = 355
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/343 (53%), Positives = 254/343 (74%), Gaps = 3/343 (0%)
Query: 94 ALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPE 152
AL+ + I FGKGS+ RLG A +V++ +G + LD+A+G GGLP+GRIVEI+GPE
Sbjct: 10 ALNHVLGKIEKDFGKGSIMRLGEASSMVVDSISTGSIGLDIAVGIGGLPRGRIVEIYGPE 69
Query: 153 SSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEI 212
SSGKTT+ALH++AE QK GG A +DAEHA DP Y++ALGVDV+NLI+ QPD GE ALEI
Sbjct: 70 SSGKTTVALHSVAEAQKNGGIAAFIDAEHALDPVYARALGVDVDNLIISQPDTGEQALEI 129
Query: 213 ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCT 272
+ + RSGAID+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK++G+ K+ C
Sbjct: 130 TEALIRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGSIKKSNCV 189
Query: 273 LIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRV 332
IF+NQ+R K+G+ +GNPE T+GG ALKF++SVRL++R IK +GD+ +G R RV+V
Sbjct: 190 AIFINQLREKVGIMFGNPETTTGGRALKFYSSVRLDVRKIDTIK--QGDKILGSRTRVKV 247
Query: 333 QKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKAL 392
K+KV+ P+KQAEF+I++GEG+SK+G +LD A +DIV + G+WY+Y D +LGQGR+
Sbjct: 248 VKNKVAPPFKQAEFDIMYGEGISKIGDLLDIAANVDIVKKSGSWYNYQDIKLGQGRENVK 307
Query: 393 QYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
++L DN L EIE+ VR G ++ ++ NQ N
Sbjct: 308 KFLADNMDLTNEIEEKVRKYYKLGPEYRDLEEDELNEDNQNAN 350
>gi|433445661|ref|ZP_20409967.1| recombinase A [Anoxybacillus flavithermus TNO-09.006]
gi|432000937|gb|ELK21825.1| recombinase A [Anoxybacillus flavithermus TNO-09.006]
Length = 345
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ AL+ A+ I FGKGS+ +LG + T SG L LD+ALG GG P+GRI+EI
Sbjct: 3 DRQAALEQALKQIEKQFGKGSIMKLGEQTDRQISTVSSGSLALDIALGVGGYPRGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPVYAEKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF+ASVRLE+R +IK +G++ VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYASVRLEVRRAEQIK--QGNDMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K A+ +I++GEG+SK G ++D +DI+ + GAWYSY D+RLGQGR
Sbjct: 241 KIKVVKNKVAPPFKTADVDIMYGEGISKEGEIIDMGAELDIIQKSGAWYSYKDERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++NP + EEI + +R
Sbjct: 301 ENAKQFLKENPHIMEEIAREIR 322
>gi|429757402|ref|ZP_19289938.1| RecA protein [Actinomyces sp. oral taxon 181 str. F0379]
gi|429175072|gb|EKY16525.1| RecA protein [Actinomyces sp. oral taxon 181 str. F0379]
Length = 363
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/322 (55%), Positives = 245/322 (76%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+ A++ I+ FGKGSV RLG V+ P+G L LD+ALG GGLP+GR++EI
Sbjct: 15 DRNKALELALSQIDKQFGKGSVMRLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVIEI 74
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ALGVD +NL+V QPD GE
Sbjct: 75 YGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYARALGVDTDNLLVSQPDTGEQ 134
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 135 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 194
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR+++R +I+++K VG R
Sbjct: 195 TGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRIDVR---RIETLKEAGAPVGNR 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R ++ K+K++ P+KQAEF+I++G+G+S+ G ++D I+ + G+W++YGD +LGQG
Sbjct: 252 TRAKIVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVETGIIRKSGSWFTYGDDQLGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ Q+L DNP L EIE+ +
Sbjct: 312 KENVRQFLSDNPELANEIEQKI 333
>gi|451942153|ref|YP_007462790.1| recombinase A [Bartonella vinsonii subsp. berkhoffii str. Winnie]
gi|451901540|gb|AGF76002.1| recombinase A [Bartonella vinsonii subsp. berkhoffii str. Winnie]
Length = 347
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKAKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGIGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C ++F+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDAIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHAEIATEIETALR 322
>gi|227822194|ref|YP_002826165.1| recombinase A [Sinorhizobium fredii NGR234]
gi|254790442|sp|C3MD93.1|RECA_RHISN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|227341194|gb|ACP25412.1| RecA protein [Sinorhizobium fredii NGR234]
Length = 361
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/328 (58%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSKDSVIEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+AL PRAEIEGE+G G+QARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPDLLREIEMALR 335
>gi|406670684|ref|ZP_11077929.1| protein recA [Facklamia hominis CCUG 36813]
gi|405582200|gb|EKB56206.1| protein recA [Facklamia hominis CCUG 36813]
Length = 353
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ+ALD A+ +I +FGKG++ RLG VET PSG L LD+ALG GG P+GRI+E
Sbjct: 5 NRQKALDQALKNIEKNFGKGAIMRLGEQADVKVETIPSGSLALDVALGIGGYPRGRIIEC 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIA VQK GG A +DAEHA DP+Y+ LGVDV+NL++ QPD GE
Sbjct: 65 YGPESSGKTTVALHAIASVQKNGGLAAFIDAEHALDPTYAAQLGVDVDNLLLSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGAID++ VDSV+AL PRAEIEGE+G IGLQARLMSQA+RK+SG+ +K
Sbjct: 125 GLEIADALVSSGAIDIVVVDSVAALVPRAEIEGEMGDSHIGLQARLMSQAMRKLSGSINK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
F+NQIR K+GV +GNPEVT GG ALKF++S+R+E+R +K GD G R
Sbjct: 185 TKTIAFFINQIREKVGVMFGNPEVTPGGRALKFYSSIRMEVRRQETLKQ-NGDA-YGNRT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R+++ K+K++ P+K+A +II+G+G+S++G ++D A +DI+ + G+WYSY ++R+GQGR
Sbjct: 243 RIKIVKNKMAPPFKEALVDIIYGQGISQVGELVDMAADLDIINKAGSWYSYHEERIGQGR 302
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL DNP L++EIE +VR
Sbjct: 303 ENAKQYLLDNPNLKDEIEGLVR 324
>gi|407976207|ref|ZP_11157108.1| recombinase A [Nitratireductor indicus C115]
gi|407428382|gb|EKF41065.1| recombinase A [Nitratireductor indicus C115]
Length = 361
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG+ + +ET +G L LD+ALG GGLP+GRI+
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGIGGLPRGRII 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D+I VDSV+ALTPRAEIEGE+G G+QARLMSQALRK++ +
Sbjct: 134 EQALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G +K DE VG
Sbjct: 194 SRSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGSVKDR--DETVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ R++V K+K++ P+KQ EF+I++GEGVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRIKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LRDNP + EIE +R
Sbjct: 312 GRENAKQFLRDNPEILNEIETALR 335
>gi|374291978|ref|YP_005039013.1| Recombinase A (recA) [Azospirillum lipoferum 4B]
gi|384872617|sp|P62209.2|RECA_AZOL4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|357423917|emb|CBS86779.1| Recombinase A (recA) [Azospirillum lipoferum 4B]
Length = 359
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/325 (58%), Positives = 248/325 (76%), Gaps = 6/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVET--FPSGCLTLDLALG-GGLPKGRI 145
+D+Q+ALDAA++ I +FGKGS+ +LG A LVET +G L LD+ALG GGLPKGRI
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLG-ARENLVETEVISTGSLGLDIALGIGGLPKGRI 72
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
VEI+GPESSGKTTLALHAIA+ QK GG VDAEHA DPSY++ LGV+++ L++ QPD
Sbjct: 73 VEIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDA 132
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK++G+
Sbjct: 133 GEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGS 192
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
SK+ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 193 ISKSNCLVIFINQIRLKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKDR--DTVVG 250
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
+ RV+V K+K++ P++ EF+I++GEGVSK+G +LD +V + GAW+SY R+G
Sbjct: 251 NQTRVKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVDKSGAWFSYDGTRIG 310
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVR 410
QGR+ A YLR+NP + + IE +R
Sbjct: 311 QGRENAKTYLRNNPEMADAIEAKIR 335
>gi|297584104|ref|YP_003699884.1| recA protein [Bacillus selenitireducens MLS10]
gi|297142561|gb|ADH99318.1| recA protein [Bacillus selenitireducens MLS10]
Length = 352
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/349 (52%), Positives = 256/349 (73%), Gaps = 11/349 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I FGKGS+ +LG V T SG L LD+ALG GG P+GR++E+
Sbjct: 3 DRKQALDMALKQIEKQFGKGSIMKLGEQAEQRVSTISSGVLALDIALGVGGYPRGRVIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y++ALGVD++NL++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQRNGGTAAFIDAEHALDPKYAQALGVDIDNLLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 123 ALEIAEALVRSGAVDMIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAVSK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +F+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K +G++ +G +
Sbjct: 183 SKTIAMFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNDMIGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+S+ G +LD A +DIV + GAWYSY R+GQGR
Sbjct: 241 KLKVVKNKVAPPFKTAEVDIMYGEGISREGSILDIASDLDIVQKSGAWYSYDGDRMGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSF-LRNVSLPNQEENI 436
+ A Q+L++N + EI++ +R H G +++V P ++E +
Sbjct: 301 ENAKQFLKENDEVSSEIDRKIRE-------HHGLLDVQDVPAPAEDEAL 342
>gi|355673321|ref|ZP_09058918.1| RecA protein [Clostridium citroniae WAL-17108]
gi|354814787|gb|EHE99386.1| RecA protein [Clostridium citroniae WAL-17108]
Length = 378
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 252/324 (77%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I ++GKGSV +LG + + +ET P+G ++LD+ALG GG+PKGRI+E
Sbjct: 18 EKLKALDAALTQIEKAYGKGSVMKLGDSRANMNIETVPTGSISLDIALGLGGVPKGRIIE 77
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y++ +GVD++NL + QPDNGE
Sbjct: 78 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGE 137
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++ S
Sbjct: 138 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVIS 197
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF++SVRL++R +K +G E G R
Sbjct: 198 KSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRLDVRRIETLK--QGGEVTGNR 255
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VRV+V K+K++ P+K+AEF+I+FG+G+SK G +LD A +I+ + GAW++YG ++GQG
Sbjct: 256 VRVKVVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAVKENIIEKSGAWFAYGGAKIGQG 315
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ + QYL DNP + E+E VR+
Sbjct: 316 RENSKQYLADNPAMMAEVEAKVRA 339
>gi|261407902|ref|YP_003244143.1| recA protein [Paenibacillus sp. Y412MC10]
gi|261284365|gb|ACX66336.1| recA protein [Paenibacillus sp. Y412MC10]
Length = 353
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 247/323 (76%), Gaps = 5/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VE PSG L LD+ALG GGLP+GRI+E+
Sbjct: 3 DRRAALEMALRQIEKQFGKGSIMKLGESTHMQVEIVPSGSLALDIALGTGGLPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKAGGQAAFIDAEHALDPSYANKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +I+S+K G++ VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RIESIKMGNDVVGNR 239
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAE +I++GEG+S+ G ++D +DIV + GAWYSY RLGQG
Sbjct: 240 TRIKVVKNKVAPPFKQAELDIMYGEGISREGSLIDIGTELDIVDKSGAWYSYAGDRLGQG 299
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+L++NP + IE +R
Sbjct: 300 RENAKQFLKENPEIASVIENKIR 322
>gi|405382935|ref|ZP_11036711.1| protein RecA [Rhizobium sp. CF142]
gi|397320696|gb|EJJ25128.1| protein RecA [Rhizobium sp. CF142]
Length = 363
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 250/328 (76%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNESIVEIETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKIFLRDNPDLAREIETGLR 335
>gi|222148885|ref|YP_002549842.1| recombinase A [Agrobacterium vitis S4]
gi|254790418|sp|B9JX56.1|RECA_AGRVS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|221735871|gb|ACM36834.1| RecA protein [Agrobacterium vitis S4]
Length = 362
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/328 (57%), Positives = 251/328 (76%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LG+ + VET +G L+LD+ALG GGLPK
Sbjct: 10 EDKTVDKSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ +DSV+ALTP+AEIEGE+G G+QARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G+ S++ C ++F+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K +E
Sbjct: 190 TGSISRSNCMVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKDR--EE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 IVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKAGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP + +EIE +R
Sbjct: 308 RLGQGRENAKIFLRDNPAVADEIETALR 335
>gi|118442927|ref|YP_878196.1| recombinase A [Clostridium novyi NT]
gi|166220640|sp|A0Q0P4.1|RECA_CLONN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|118133383|gb|ABK60427.1| recA protein [Clostridium novyi NT]
Length = 350
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 246/323 (76%), Gaps = 5/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA+ I FGKGSV +LG VE +G L+LD+ALG GG+P+GRI+EI
Sbjct: 4 EKMKALQAAITQIEKQFGKGSVMKLGEEHVLNVEAISTGSLSLDIALGIGGIPRGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+KALGVD++NLIV QPD GE
Sbjct: 64 FGPESSGKTTVALHIIAEAQKSGGTAAFIDAEHALDPVYAKALGVDIDNLIVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 124 ALEICEALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ C IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R KI+++K GDE +G R
Sbjct: 184 SKCATIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVR---KIETIKQGDEFLGSR 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G G+S G +LD +I+ + G+W+SY D RLGQG
Sbjct: 241 TRVKVVKNKVAPPFKQAEFDIMYGTGISFEGNVLDVGVDNEIIQKSGSWFSYNDTRLGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ Q+LR+NP + E+E +R
Sbjct: 301 RENVKQFLRENPSILLEVENKIR 323
>gi|319953059|ref|YP_004164326.1| protein reca [Cellulophaga algicola DSM 14237]
gi|319421719|gb|ADV48828.1| Protein recA [Cellulophaga algicola DSM 14237]
Length = 352
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/319 (56%), Positives = 245/319 (76%), Gaps = 2/319 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL ++ ++ ++GKG+V ++G + VE PSG L LD+ALG GG P+GR++EI+GP
Sbjct: 27 KALKLTLDKLDKTYGKGAVMKMGDSVAQDVEVIPSGSLGLDVALGVGGYPRGRVIEIYGP 86
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTL LHAIAE QK GG A +DAEHAFD Y+ LGVD++NLI+ QPDNGE LE
Sbjct: 87 ESSGKTTLTLHAIAEAQKNGGIAAFIDAEHAFDRFYAAKLGVDIDNLIISQPDNGEQGLE 146
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G+ SK C
Sbjct: 147 IADNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGSISKTKC 206
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
T+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G+ G + RV+
Sbjct: 207 TVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDTDGNVQ-GNKTRVK 265
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+KV+ P++Q EF+I++GEG+SK+G ++D +I+ + G+W+SYGD +LGQGRD
Sbjct: 266 VVKNKVAPPFRQTEFDIMYGEGISKVGEVIDLGVEYEIIKKSGSWFSYGDTKLGQGRDAV 325
Query: 392 LQYLRDNPLLQEEIEKVVR 410
L DNP LQEE++ +R
Sbjct: 326 KNLLLDNPELQEELDAKIR 344
>gi|329922220|ref|ZP_08277937.1| RecA protein [Paenibacillus sp. HGF5]
gi|328942333|gb|EGG38602.1| RecA protein [Paenibacillus sp. HGF5]
Length = 356
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 247/323 (76%), Gaps = 5/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VE PSG L LD+ALG GGLP+GRI+E+
Sbjct: 6 DRRAALEMALRQIEKQFGKGSIMKLGESTHMQVEIVPSGSLALDIALGTGGLPRGRIIEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 66 YGPESSGKTTVALHAIAEVQKAGGQAAFIDAEHALDPSYANKLGVNIDELLLSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK+SG +K
Sbjct: 126 ALEIAEALVRSGAVDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +I+S+K G++ VG R
Sbjct: 186 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RIESIKMGNDVVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAE +I++GEG+S+ G ++D +DIV + GAWYSY RLGQG
Sbjct: 243 TRIKVVKNKVAPPFKQAELDIMYGEGISREGSLIDIGTELDIVDKSGAWYSYAGDRLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+L++NP + IE +R
Sbjct: 303 RENAKQFLKENPEIASVIENKIR 325
>gi|239628382|ref|ZP_04671413.1| recA protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518528|gb|EEQ58394.1| recA protein [Clostridiales bacterium 1_7_47FAA]
Length = 389
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 253/324 (78%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I ++GKGSV +LG + + +ET P+G ++LD+ALG GG+PKGRI+E
Sbjct: 18 EKLKALDAALTQIEKAYGKGSVMKLGDSRANMNIETVPTGSISLDIALGLGGVPKGRIIE 77
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPDNGE
Sbjct: 78 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGE 137
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++ S
Sbjct: 138 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVIS 197
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVRL++R +K +G E +G R
Sbjct: 198 KSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYASVRLDVRRIETLK--QGGEVIGNR 255
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VRV+V K+K++ P+K+AEF+I+FG+G+SK+G +LD A +I+ + GAW++Y ++GQG
Sbjct: 256 VRVKVVKNKIAPPFKEAEFDIMFGKGISKVGDILDLAVKENIIEKSGAWFAYNGSKIGQG 315
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ + QYL DNP + E+E VR+
Sbjct: 316 RENSKQYLSDNPEMCAEVEAKVRA 339
>gi|294500865|ref|YP_003564565.1| RecA2 protein [Bacillus megaterium QM B1551]
gi|295706211|ref|YP_003599286.1| recombinase A [Bacillus megaterium DSM 319]
gi|384045283|ref|YP_005493300.1| recombinase A [Bacillus megaterium WSH-002]
gi|25004877|emb|CAD56684.1| RecA2 protein [Bacillus megaterium]
gi|294350802|gb|ADE71131.1| RecA2 protein [Bacillus megaterium QM B1551]
gi|294803870|gb|ADF40936.1| RecA2 protein [Bacillus megaterium DSM 319]
gi|345442974|gb|AEN87991.1| recombinase A [Bacillus megaterium WSH-002]
Length = 345
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/322 (56%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ ALD A+ I FGKGS+ +LG + T PSG L LD+ALG GG P+GR+VE+
Sbjct: 3 DRQAALDMALKQIEKQFGKGSIMKLGEQTEKRISTIPSGSLALDIALGVGGYPRGRVVEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G++ VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGNDIVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P++ AE +I++GEG+SK G +LD A +DIV + G+WYSY D+RLGQGR
Sbjct: 241 RIKVVKNKVAPPFRAAEVDIMYGEGISKEGEILDIASELDIVQKSGSWYSYNDERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++N +++EI VR
Sbjct: 301 ENAKQFLKENTDIRQEIAGQVR 322
>gi|379722824|ref|YP_005314955.1| recombinase A [Paenibacillus mucilaginosus 3016]
gi|386725599|ref|YP_006191925.1| recombinase A [Paenibacillus mucilaginosus K02]
gi|378571496|gb|AFC31806.1| RecA [Paenibacillus mucilaginosus 3016]
gi|384092724|gb|AFH64160.1| recombinase A [Paenibacillus mucilaginosus K02]
Length = 349
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/322 (55%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VET SG L LD+ALG GG P+GRI+E+
Sbjct: 3 DRRAALENALRQIEKQFGKGSIMKLGESTHMQVETISSGSLALDIALGIGGFPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y+ LG++++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKNGGTAAFIDAEHALDPLYASKLGINIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF++SVRL++R IK +G++ VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRRIETIK--QGNDMVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++GEG+S+ G ++D A MD++ + GAWYS+ + RLGQGR
Sbjct: 241 RIKVVKNKVAPPFKQAEIDIMYGEGISREGSIVDIATEMDVIQKSGAWYSFNNDRLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ Q+L++NP + E IEK +R
Sbjct: 301 ENVKQFLKENPQVAEVIEKKIR 322
>gi|429769102|ref|ZP_19301224.1| RecA protein [Brevundimonas diminuta 470-4]
gi|429187902|gb|EKY28801.1| RecA protein [Brevundimonas diminuta 470-4]
Length = 359
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GGLPKGRIVE 147
D+QRAL+AA+ I+ +FGKGSV +LG AG A +E+ +G L LD+ALG GGLP GR++E
Sbjct: 15 DKQRALEAAIAQIDRAFGKGSVMKLGKAGQVAEIESVSTGSLGLDMALGIGGLPVGRVIE 74
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
+FGPESSGKTTLALH +AEVQK GG A VDAEHA DP Y+ LGV++++L+V QPD GE
Sbjct: 75 VFGPESSGKTTLALHTVAEVQKKGGVAAFVDAEHALDPVYAHKLGVNLDDLLVSQPDAGE 134
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + S
Sbjct: 135 QALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASIS 194
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C ++F+NQIR+KIGV YG+PE T+GG ALKF+ASVRL+IR TG IK+ DE VG
Sbjct: 195 KSKCIVLFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGAIKNR--DEVVGNT 252
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+++ F+I++GEG+SK+G ++D IV + G+W+SY R+GQG
Sbjct: 253 TRVKVVKNKVAPPFREVIFDIMYGEGISKIGEIIDLGVKAGIVEKSGSWFSYDSTRIGQG 312
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A ++L++NP + IEK VR
Sbjct: 313 RENAKEFLKNNPDMAASIEKAVR 335
>gi|187779003|ref|ZP_02995476.1| hypothetical protein CLOSPO_02598 [Clostridium sporogenes ATCC
15579]
gi|187772628|gb|EDU36430.1| RecA protein [Clostridium sporogenes ATCC 15579]
Length = 355
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM I FGKGS+ +LG VE+ +G L LD+ALG GG+P+GRI+EI
Sbjct: 11 EKLKAIEAAMGQIEKQFGKGSIMKLGEDSILNVESISTGSLDLDIALGIGGVPRGRIIEI 70
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK+GG A +DAEHA DPSY++ LGVD++NLIV QPD GE
Sbjct: 71 FGPESSGKTTVALHILAEAQKIGGAAAFIDAEHALDPSYARNLGVDIDNLIVSQPDTGEQ 130
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 131 ALEITEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLAGSINK 190
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 191 SKCVAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIDSIK--QGDQILGNRT 248
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+K AEF+I++ EG+SK+G +LD ++V + G+W+SY D RLGQGR
Sbjct: 249 RVKINKNKVAPPFKMAEFDIMYNEGISKVGNILDVGVREELVEKSGSWFSYKDTRLGQGR 308
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L+DN + EIE +R
Sbjct: 309 ENAKQFLKDNMNIALEIENTIR 330
>gi|404371132|ref|ZP_10976442.1| protein recA [Clostridium sp. 7_2_43FAA]
gi|404301487|gb|EEH97949.2| protein recA [Clostridium sp. 7_2_43FAA]
Length = 387
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/334 (55%), Positives = 244/334 (73%), Gaps = 8/334 (2%)
Query: 94 ALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPE 152
A+D+ M I FGKGSV +LGS +ET +GCL LD+ALG GG+P+GRI+E++GPE
Sbjct: 10 AIDSVMKQIEKQFGKGSVIKLGSNPIMDIETISTGCLALDIALGVGGVPRGRIIEVYGPE 69
Query: 153 SSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEI 212
SSGKTT+ALH IAE QKLGG A +DAEHA DP+Y+K LGV E+LIV QPD GE ALEI
Sbjct: 70 SSGKTTIALHIIAEAQKLGGAAAFIDAEHALDPAYAKNLGVSTEDLIVSQPDTGEQALEI 129
Query: 213 ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCT 272
+ + RS A+D++ VDSV+AL PRAEIEGE+G IGLQARLMSQALRK++ +K+ C
Sbjct: 130 TEALVRSNAVDVLVVDSVAALVPRAEIEGEMGDSHIGLQARLMSQALRKLTAAINKSQCV 189
Query: 273 LIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRV 332
+IF+NQ+R KIG+ +GNPE T+GG ALKF+ASVRL+IR IK G+ +G R R++V
Sbjct: 190 VIFINQLREKIGIMFGNPETTTGGRALKFYASVRLDIRKIDTIKV--GENILGSRARIKV 247
Query: 333 QKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKAL 392
K+KV+ P+KQAEF+I++ EG+SK G +LD A DI+ + G W+SY D RLGQGR+ +
Sbjct: 248 IKNKVAPPFKQAEFDIMYNEGISKEGNLLDIAVNEDIINKSGTWFSYNDIRLGQGRENSK 307
Query: 393 QYLRDNPLLQEEIEKVVRS-----MMSDGSVHQG 421
YL++N L E+E +R ++ D V +G
Sbjct: 308 AYLKENKDLALEVENAIREKHNLPLVKDTKVQEG 341
>gi|150008088|ref|YP_001302831.1| recombinase A [Parabacteroides distasonis ATCC 8503]
gi|255014926|ref|ZP_05287052.1| recombinase A [Bacteroides sp. 2_1_7]
gi|298376559|ref|ZP_06986514.1| protein RecA [Bacteroides sp. 3_1_19]
gi|410105364|ref|ZP_11300272.1| protein recA [Parabacteroides sp. D25]
gi|423331392|ref|ZP_17309176.1| protein recA [Parabacteroides distasonis CL03T12C09]
gi|149936512|gb|ABR43209.1| RecA [Parabacteroides distasonis ATCC 8503]
gi|298266437|gb|EFI08095.1| protein RecA [Bacteroides sp. 3_1_19]
gi|409230688|gb|EKN23550.1| protein recA [Parabacteroides distasonis CL03T12C09]
gi|409232574|gb|EKN25420.1| protein recA [Parabacteroides sp. D25]
Length = 350
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/321 (57%), Positives = 249/321 (77%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL AAM+ I ++GKGS+ +LG +E P+G + L+ ALG GG PKGRIVEI
Sbjct: 24 DKLKALRAAMDKIEKNYGKGSIMKLGDENIEDIEVIPTGSIALNAALGVGGYPKGRIVEI 83
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+A+HAIAE QK GG A +DAEHAFD Y++ LGVDVENL + QPDNGE
Sbjct: 84 YGPESSGKTTIAIHAIAEAQKKGGIAAFIDAEHAFDRFYAEKLGVDVENLWISQPDNGEQ 143
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+++ RS A+D+I +DSV+ALTP+AEIEG++G ++GLQARLMSQALRK++ +K
Sbjct: 144 ALEIAEQLIRSSAVDIIVIDSVAALTPKAEIEGDMGDSKMGLQARLMSQALRKLTAAINK 203
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IRS GK+K GDE G +V
Sbjct: 204 TNTTCIFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRSIGKLKD--GDEIKGNQV 261
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF+I+FG+G+S+ G ++D ++I+ + G+WYSY D +LGQGR
Sbjct: 262 RVKVIKNKVAPPFRKAEFDIMFGQGISRSGEIIDLGSELNIIKKSGSWYSYNDTKLGQGR 321
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
D A Q + DNP L +E+ +++
Sbjct: 322 DAAKQCVEDNPELADELSELI 342
>gi|256840733|ref|ZP_05546241.1| recombination protein RecA [Parabacteroides sp. D13]
gi|262381338|ref|ZP_06074476.1| RecA protein [Bacteroides sp. 2_1_33B]
gi|256738005|gb|EEU51331.1| recombination protein RecA [Parabacteroides sp. D13]
gi|262296515|gb|EEY84445.1| RecA protein [Bacteroides sp. 2_1_33B]
Length = 350
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/321 (57%), Positives = 249/321 (77%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL AAM+ I ++GKGS+ +LG +E P+G + L+ ALG GG PKGRIVEI
Sbjct: 24 DKLKALRAAMDKIEKNYGKGSIMKLGDESIEDIEVIPTGSIALNAALGVGGYPKGRIVEI 83
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+A+HAIAE QK GG A +DAEHAFD Y++ LGVDVENL + QPDNGE
Sbjct: 84 YGPESSGKTTIAIHAIAEAQKKGGIAAFIDAEHAFDRFYAEKLGVDVENLWISQPDNGEQ 143
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+++ RS A+D+I +DSV+ALTP+AEIEG++G ++GLQARLMSQALRK++ +K
Sbjct: 144 ALEIAEQLIRSSAVDIIVIDSVAALTPKAEIEGDMGDSKMGLQARLMSQALRKLTAAINK 203
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IRS GK+K GDE G +V
Sbjct: 204 TNTTCIFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRSIGKLKD--GDEIKGNQV 261
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF+I+FG+G+S+ G ++D ++I+ + G+WYSY D +LGQGR
Sbjct: 262 RVKVIKNKVAPPFRKAEFDIMFGQGISRSGEIIDLGSELNIIKKSGSWYSYNDTKLGQGR 321
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
D A Q + DNP L +E+ +++
Sbjct: 322 DAAKQCVEDNPELADELSELI 342
>gi|329890680|ref|ZP_08269023.1| protein RecA [Brevundimonas diminuta ATCC 11568]
gi|328845981|gb|EGF95545.1| protein RecA [Brevundimonas diminuta ATCC 11568]
Length = 351
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/323 (57%), Positives = 252/323 (78%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GGLPKGRIVE 147
D+QRAL+AA+ I+ +FGKGSV +LG AG A +E+ +G L LD+ALG GGLP GR++E
Sbjct: 7 DKQRALEAAIAQIDRAFGKGSVMKLGKAGQVAEIESVSTGSLGLDMALGIGGLPVGRVIE 66
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
+FGPESSGKTTLALH +AEVQK GG A VDAEHA DP Y++ LGV++++L+V QPD GE
Sbjct: 67 VFGPESSGKTTLALHTVAEVQKKGGVAAFVDAEHALDPVYAQKLGVNLDDLLVSQPDAGE 126
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + S
Sbjct: 127 QALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASIS 186
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C ++F+NQIR+KIGV YG+PE T+GG ALKF+ASVRL+IR TG IK+ DE VG
Sbjct: 187 KSKCIVLFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGAIKNR--DEVVGNT 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+++ F+I++GEG+SK+G ++D +I+ + G+W+SY R+GQG
Sbjct: 245 TRVKVVKNKVAPPFREVIFDIMYGEGISKIGEIIDLGVKANIIEKSGSWFSYDSTRIGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A ++L++NP + IEK VR
Sbjct: 305 RENAKEFLKNNPDMALAIEKAVR 327
>gi|421588720|ref|ZP_16033969.1| recombinase A [Rhizobium sp. Pop5]
gi|403706515|gb|EJZ21764.1| recombinase A [Rhizobium sp. Pop5]
Length = 362
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELSLR 335
>gi|251779396|ref|ZP_04822316.1| protein RecA [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083711|gb|EES49601.1| protein RecA [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 356
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 242/323 (74%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+++ +A++ AM I FGKGSV +LG ++ +GCL LD+ALG GG+PKGRIVE
Sbjct: 6 INKLKAIENAMGQIEKQFGKGSVMKLGEDSVLNIDAISTGCLDLDIALGIGGVPKGRIVE 65
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH AE QK GG +DAEHA DPSY++ LGVD ENLIV QPD GE
Sbjct: 66 IYGPESSGKTTIALHIAAEAQKKGGAVGFIDAEHALDPSYARNLGVDTENLIVSQPDTGE 125
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
LEIA+ + RSGAID+I VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G S
Sbjct: 126 QGLEIAEALVRSGAIDVIIVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGTIS 185
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K C IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL++R IK +GD VG R
Sbjct: 186 KTNCIAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDVRRIDSIK--QGDGIVGNR 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAEF+I++ EG+S+ G ++D +IV + GAW+SYGD RLGQG
Sbjct: 244 TRIKVTKNKVAPPFKQAEFDIMYNEGISREGNIVDVGVKEEIVQKSGAWFSYGDIRLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A QYL++NP + +IE +R
Sbjct: 304 RENAKQYLKENPEVALDIENQIR 326
>gi|257056758|ref|YP_003134590.1| protein RecA [Saccharomonospora viridis DSM 43017]
gi|256586630|gb|ACU97763.1| protein RecA [Saccharomonospora viridis DSM 43017]
Length = 345
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/335 (56%), Positives = 252/335 (75%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALD A+ I+ FGKGSV RLG VE P+G + LD+ALG GGLP+GRIVEI
Sbjct: 6 DKGKALDLALAQIDKQFGKGSVMRLGEESRPPVEVIPTGAIALDIALGIGGLPRGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+KALGVD ++L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKALGVDTDSLLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 126 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALHN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 186 SGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGGEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G GVS+ G ++D IV + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDILYGVGVSREGSLIDMGVDQGIVRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
++ A ++LR+NP + EIEK ++ + G+ QGS
Sbjct: 303 KENARRFLRENPDVANEIEKKIKEKLGIGT--QGS 335
>gi|418937705|ref|ZP_13491312.1| Protein recA [Rhizobium sp. PDO1-076]
gi|375055572|gb|EHS51813.1| Protein recA [Rhizobium sp. PDO1-076]
Length = 361
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LG+ + VET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ +DSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K +E
Sbjct: 190 TASISKSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKDR--EE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKAGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L +EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPALAQEIELALR 335
>gi|424827596|ref|ZP_18252383.1| recombinase A [Clostridium sporogenes PA 3679]
gi|365980036|gb|EHN16077.1| recombinase A [Clostridium sporogenes PA 3679]
Length = 352
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 259/347 (74%), Gaps = 7/347 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM I FGKGS+ +LG VE+ +G L LD+ALG GG+P+GRI+EI
Sbjct: 8 EKLKAIEAAMGQIEKQFGKGSIMKLGEDSILNVESISTGSLDLDIALGIGGVPRGRIIEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK+GG A +DAEHA DPSY++ LGVD++NLIV QPD GE
Sbjct: 68 FGPESSGKTTVALHILAEAQKVGGAAAFIDAEHALDPSYARNLGVDIDNLIVSQPDTGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 128 ALEITEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLAGSINK 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 188 SKCVAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIDSIK--QGDQILGNRT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+K AEF+I++ EG+SK+G +LD ++V + G+W+SY D RLGQGR
Sbjct: 246 RVKINKNKVAPPFKMAEFDIMYNEGISKVGNILDVGVREELVEKSGSWFSYKDTRLGQGR 305
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ A Q+L+DN + EIE +R D V ++NV++ N++++
Sbjct: 306 ENAKQFLKDNMNIALEIENTIRK-KHDLPVAD---VKNVNIANKKQD 348
>gi|284030936|ref|YP_003380867.1| recA protein [Kribbella flavida DSM 17836]
gi|283810229|gb|ADB32068.1| recA protein [Kribbella flavida DSM 17836]
Length = 355
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 246/330 (74%), Gaps = 5/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL A+ I GKGSV RLG G A +E P+G + LD+ALG GGLP+GR+VEI
Sbjct: 13 DREKALATALTQIERQCGKGSVMRLGEQGKAPIEVIPTGSIALDVALGIGGLPRGRVVEI 72
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y++ LGVD + L+V QPD+GE
Sbjct: 73 YGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPDYARKLGVDTDALLVSQPDSGEQ 132
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+G S
Sbjct: 133 ALEIADMLIRSGAIDIVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGAVSG 192
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+S+K G + VG R
Sbjct: 193 TNTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIESLKDGTDFVGNR 249
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+II+G+G+S+ G +LD V + GAW++Y +LGQG
Sbjct: 250 TRVKVVKNKVAPPFKQAEFDIIYGQGISREGSLLDLGVEQGFVRKAGAWFTYESDQLGQG 309
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
R+ A +LRDNP L E+EK ++ M G+
Sbjct: 310 RENARNFLRDNPDLANELEKKIKEKMGIGT 339
>gi|86141084|ref|ZP_01059643.1| RecA [Leeuwenhoekiella blandensis MED217]
gi|85833026|gb|EAQ51475.1| RecA [Leeuwenhoekiella blandensis MED217]
Length = 336
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/315 (58%), Positives = 243/315 (77%), Gaps = 2/315 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL ++ ++ ++GKG+V ++G VE+ +G L LD+ALG GGLPKGRI+EI+GP
Sbjct: 10 KALKLTLDKMDKTYGKGTVMKMGDNAIIEVESISTGSLGLDMALGVGGLPKGRIIEIYGP 69
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTL LHAIAE QK GG A +DAEHAFD Y+ LGVD+ENLI+ QPDNGE ALE
Sbjct: 70 ESSGKTTLTLHAIAEAQKKGGIAAFIDAEHAFDRFYADKLGVDIENLIISQPDNGEQALE 129
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
I D + RSGAID+I VDSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G+ SK C
Sbjct: 130 ITDNLIRSGAIDIIVVDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGSISKTNC 189
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
T+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G E G + RV+
Sbjct: 190 TVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDSNG-EVQGNKTRVK 248
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+KV+ P++QAEF+I++GEG+SK+G +LD +I+ + G+W+SY D +LGQGRD
Sbjct: 249 VVKNKVAPPFRQAEFDIMYGEGISKVGEILDIGVDYEIIKKSGSWFSYQDTKLGQGRDAV 308
Query: 392 LQYLRDNPLLQEEIE 406
L+DNP L EE+E
Sbjct: 309 KAILKDNPDLLEELE 323
>gi|339443516|ref|YP_004709521.1| hypothetical protein CXIVA_24520 [Clostridium sp. SY8519]
gi|338902917|dbj|BAK48419.1| hypothetical protein CXIVA_24520 [Clostridium sp. SY8519]
Length = 355
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/323 (54%), Positives = 257/323 (79%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA++ I +GKG++ +LG +G AL VET P+G ++LD+ALG GG+P+GR++E
Sbjct: 5 DKLKALDAAISQIEKQYGKGAIMKLGDSGAALNVETIPTGSISLDIALGLGGIPRGRVIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP+Y++ +GVD++NL + QPDNGE
Sbjct: 65 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPAYARNIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++G +
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTGVIA 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ CT+IF+NQ+R K+GV +GNPE T+GG ALKF++S+R+++R IK + E+VG R
Sbjct: 185 KSNCTVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRMDVRRIEAIK--QNGENVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+K++ P+K+AEF+I+FG+G+S+ G +LD A ++V + GAWYSY +++GQG
Sbjct: 243 TRIKVVKNKIAPPFKEAEFDIMFGQGISREGDVLDLAAKCEVVDKSGAWYSYHGEKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +LR++ + +EIE+ VR
Sbjct: 303 RENAKAFLREHTDIFDEIERQVR 325
>gi|301309815|ref|ZP_07215754.1| protein RecA [Bacteroides sp. 20_3]
gi|423340289|ref|ZP_17318028.1| protein recA [Parabacteroides distasonis CL09T03C24]
gi|300831389|gb|EFK62020.1| protein RecA [Bacteroides sp. 20_3]
gi|409227724|gb|EKN20620.1| protein recA [Parabacteroides distasonis CL09T03C24]
Length = 350
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/321 (57%), Positives = 249/321 (77%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL AAM+ I ++GKGS+ +LG +E P+G + L+ ALG GG PKGRIVEI
Sbjct: 24 DKLKALRAAMDKIEKNYGKGSIMKLGDESIEDIEVIPTGSIALNAALGVGGYPKGRIVEI 83
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+A+HAIAE QK GG A +DAEHAFD Y++ LGVDVENL + QPDNGE
Sbjct: 84 YGPESSGKTTIAIHAIAEAQKKGGIAAFIDAEHAFDRFYAEKLGVDVENLWISQPDNGEQ 143
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+++ RS A+D+I +DSV+ALTP+AEIEG++G ++GLQARLMSQALRK++ +K
Sbjct: 144 ALEIAEQLIRSSAVDIIVIDSVAALTPKAEIEGDMGDSKMGLQARLMSQALRKLTAAINK 203
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IRS GK+K GDE G +V
Sbjct: 204 TNTTCIFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRSIGKLKD--GDEIKGNQV 261
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF+I+FG+G+S+ G ++D ++I+ + G+WYSY D +LGQGR
Sbjct: 262 RVKVIKNKVAPPFRKAEFDIMFGQGISRSGEIIDLGSELNIIKKSGSWYSYNDTKLGQGR 321
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
D A Q + DNP L +E+ +++
Sbjct: 322 DAAKQCVEDNPELADELSELI 342
>gi|451940784|ref|YP_007461422.1| recombinase A [Bartonella australis Aust/NH1]
gi|451900171|gb|AGF74634.1| recombinase A [Bartonella australis Aust/NH1]
Length = 347
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/326 (57%), Positives = 249/326 (76%), Gaps = 8/326 (2%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRI+
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGIGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH+IAE+QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHSIAEIQKSGGVCAFIDAEHALDPVYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+ GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED--V 324
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D D +
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIK----DRDIVI 236
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G + RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + IV + GAW+SY QRL
Sbjct: 237 GNQTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGAKVGIVEKSGAWFSYNSQRL 296
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVR 410
GQGR+ A Q+LR++P + EIE +R
Sbjct: 297 GQGRENAKQFLREHPEIAAEIETALR 322
>gi|132241|sp|P16238.1|RECA_THIFE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|154653|gb|AAA27385.1| recA protein [Acidithiobacillus ferrooxidans]
Length = 346
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 249/348 (71%), Gaps = 9/348 (2%)
Query: 89 LDRQRA--LDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGR 144
+D QR+ L AA++ I+ FGKG+V RLG +E + +G L LDLALG GGLP+GR
Sbjct: 1 MDEQRSKGLSAALSQIDKQFGKGAVMRLGDHNAIKDIEVYSTGSLGLDLALGVGGLPRGR 60
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
+VEI+GPESSGKTTL LHAIA Q GG A +DAEHA DP Y+ LGVD+ENL++ QPD
Sbjct: 61 VVEIYGPESSGKTTLTLHAIASCQAAGGTAAFIDAEHALDPGYAHKLGVDLENLLISQPD 120
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GE ALEIAD + RSGA+DLI +DSV+ALTP+AEIEGE+G +GLQARLMSQALR ++
Sbjct: 121 TGEQALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRNLTA 180
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
N S++ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK K DE V
Sbjct: 181 NISRSNTLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--KSDEVV 238
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G RV+V K+KV+ P+++AEF I +GEG+S+L ++D DIV + GAWYSY R+
Sbjct: 239 GNDTRVKVVKNKVAPPFREAEFAIYYGEGISRLSELVDLGVKFDIVEKSGAWYSYQGHRI 298
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQ 432
GQG+D A QYL+ +P L IE+ +R+ + H +F V P +
Sbjct: 299 GQGKDNARQYLKVHPELAANIEQRIRAAAAG---HPLAFAEEVESPQR 343
>gi|224476413|ref|YP_002634019.1| recombinase A [Staphylococcus carnosus subsp. carnosus TM300]
gi|254790446|sp|B9DPC5.1|RECA_STACT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|222421020|emb|CAL27834.1| RecA protein (recombinase A) [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 355
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/353 (52%), Positives = 258/353 (73%), Gaps = 5/353 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ+ALD + ++ SFGKG+V +LG V + SG +TLD ALG GG PKGRIVEI
Sbjct: 4 ERQKALDTVIKNMEKSFGKGAVMKLGDNKARRVSSISSGSVTLDNALGVGGYPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKQGGVAAFIDAEHALDPVYAEALGVDIDNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D+I VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIIVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ CT +F+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNCTAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D DIV + GAWYSY R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGDRMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS--DGSVHQGSFLRNVSLPNQEENILEE 439
+ YL+++P ++++I+ +R + DG + + + + N+ N+ +E
Sbjct: 302 ENVKNYLKEHPEIKQDIDNKLRQKLGIFDGDIEEKDEKQAEAEKNENTNLFDE 354
>gi|168184610|ref|ZP_02619274.1| recA protein [Clostridium botulinum Bf]
gi|237795840|ref|YP_002863392.1| recombinase A [Clostridium botulinum Ba4 str. 657]
gi|387818626|ref|YP_005678973.1| reca protein [Clostridium botulinum H04402 065]
gi|182672301|gb|EDT84262.1| recA protein [Clostridium botulinum Bf]
gi|229261898|gb|ACQ52931.1| recA protein [Clostridium botulinum Ba4 str. 657]
gi|322806670|emb|CBZ04239.1| reca protein [Clostridium botulinum H04402 065]
Length = 355
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/347 (53%), Positives = 257/347 (74%), Gaps = 7/347 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM I FGKGS+ +LG VE+ +G L LD+ALG GG+P+GRI+EI
Sbjct: 11 EKLKAIEAAMGQIEKQFGKGSIMKLGEDSILNVESISTGSLDLDIALGIGGVPRGRIIEI 70
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK+GG A +DAEHA DPSY++ LGVD++NLIV QPD GE
Sbjct: 71 FGPESSGKTTVALHILAEAQKIGGAAAFIDAEHALDPSYARNLGVDIDNLIVSQPDTGEQ 130
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 131 ALEITEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGSINK 190
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 191 SKCVAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIDSIK--QGDQILGNRT 248
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+K AEF+I++ EG+SK+G +LD ++V + G+W+SY D RLGQGR
Sbjct: 249 RVKINKNKVAPPFKMAEFDIMYNEGISKVGNILDVGVREELVDKSGSWFSYKDTRLGQGR 308
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ A Q+L+DN + EIE +R V +N+++ N++E+
Sbjct: 309 ENAKQFLKDNMNIALEIENTIRKKHDLPVVDA----KNLNIENKKED 351
>gi|340617789|ref|YP_004736242.1| recombinase A [Zobellia galactanivorans]
gi|339732586|emb|CAZ95854.1| Recombinase A [Zobellia galactanivorans]
Length = 335
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 251/325 (77%), Gaps = 2/325 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G + A VE PSG L LD+ALG GG P+GR++EI+
Sbjct: 8 KLKALKLTLDKLDKTYGKGAVMKMGDSVVADVEVIPSGSLGLDIALGVGGYPRGRVIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKNGGIAAFIDAEHAFDRFYAQKLGVDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ VDSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G+ SK
Sbjct: 128 LEIADNLIRSGAIDIVIVDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGSISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT++F+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G G + R
Sbjct: 188 NCTVVFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDTDGSVQ-GNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I++GEG+SK+G ++D +I+ + G+W+SYGD +LGQGRD
Sbjct: 247 VKVVKNKVAPPFRTAEFDIMYGEGISKVGEIIDLGVEYEIIKKSGSWFSYGDTKLGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMS 414
L DNP L EE+++ +R+ ++
Sbjct: 307 AVKSLLLDNPELFEELDEKIRAAIN 331
>gi|168180717|ref|ZP_02615381.1| recA protein [Clostridium botulinum NCTC 2916]
gi|226949757|ref|YP_002804848.1| recombinase A [Clostridium botulinum A2 str. Kyoto]
gi|182668391|gb|EDT80370.1| recA protein [Clostridium botulinum NCTC 2916]
gi|226841660|gb|ACO84326.1| recA protein [Clostridium botulinum A2 str. Kyoto]
Length = 355
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/347 (53%), Positives = 257/347 (74%), Gaps = 7/347 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM I FGKGS+ +LG VE+ +G L LD+ALG GG+P+GRI+EI
Sbjct: 11 EKLKAIEAAMGQIEKQFGKGSIMKLGEDSILNVESISTGSLDLDIALGIGGVPRGRIIEI 70
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK+GG A +DAEHA DPSY++ LGVD++NLIV QPD GE
Sbjct: 71 FGPESSGKTTVALHILAEAQKIGGAAAFIDAEHALDPSYARNLGVDIDNLIVSQPDTGEQ 130
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 131 ALEITEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGSINK 190
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 191 SKCVAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIDSIK--QGDQILGNRT 248
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+K AEF+I++ EG+SK+G +LD ++V + G+W+SY D RLGQGR
Sbjct: 249 RVKINKNKVAPPFKMAEFDIMYNEGISKVGNILDVGVREELVDKSGSWFSYKDTRLGQGR 308
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ A Q+L+DN + EIE +R V +N+++ N++E+
Sbjct: 309 ENAKQFLKDNMNIALEIENTIRKKHDLPVVDA----KNLNIENKKED 351
>gi|444299292|emb|CCP29595.1| recombinase A, partial [Rhizobium nepotum]
gi|444299294|emb|CCP29596.1| recombinase A, partial [Rhizobium nepotum]
Length = 323
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/320 (59%), Positives = 246/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLP+GRIV
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPRGRIV 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAECQKKGGICAFVDAEHALDPIYARKLGVDLQNLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEIVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP + EIE
Sbjct: 301 GRENAKTFLRDNPEMANEIE 320
>gi|398380107|ref|ZP_10538225.1| protein RecA [Rhizobium sp. AP16]
gi|397721423|gb|EJK81971.1| protein RecA [Rhizobium sp. AP16]
Length = 348
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/324 (59%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 181 SKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LRDNP L EIE +R
Sbjct: 299 GRENAKLFLRDNPDLAREIELSLR 322
>gi|209964227|ref|YP_002297142.1| recombinase A [Rhodospirillum centenum SW]
gi|226723637|sp|B6IS93.1|RECA_RHOCS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|209957693|gb|ACI98329.1| RecA protein [Rhodospirillum centenum SW]
Length = 358
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/325 (58%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+D+Q+ALDAA+ I +FGKGS+ +LG+ A E +G L LD+ALG GGLP+GRIV
Sbjct: 13 MDKQKALDAALGQIERAFGKGSIMKLGAREAMAETEAISTGSLGLDIALGIGGLPRGRIV 72
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG VDAEHA DP+Y++ LGVDV+ L++ QPD G
Sbjct: 73 EIYGPESSGKTTLALHAIAEAQKAGGTCAFVDAEHALDPAYARKLGVDVDELLISQPDAG 132
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK++G+
Sbjct: 133 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 192
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +GNPE T+GG ALKF+AS+RL+IR G IK D VG
Sbjct: 193 SKSRCLVIFINQIRLKIGVMFGNPETTTGGNALKFYASIRLDIRRIGAIKDR--DNVVGN 250
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P++ EF+I++GEGVSK+G +LD +V + GAW+SY QR+GQ
Sbjct: 251 QTRVKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVEKSGAWFSYDGQRIGQ 310
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A +LR+N + E IE VR+
Sbjct: 311 GRENAKTFLRNNAAVAEAIEAKVRA 335
>gi|121602844|ref|YP_989026.1| recombinase A [Bartonella bacilliformis KC583]
gi|421760829|ref|ZP_16197643.1| recombinase A [Bartonella bacilliformis INS]
gi|166199600|sp|A1USS3.1|RECA_BARBK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|120615021|gb|ABM45622.1| protein RecA [Bartonella bacilliformis KC583]
gi|411174597|gb|EKS44629.1| recombinase A [Bartonella bacilliformis INS]
Length = 347
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/351 (55%), Positives = 258/351 (73%), Gaps = 11/351 (3%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+++ALDAA++ I SFGKGS+ RLG G + +ET +G L+LD+ALG GGLPKGRI+
Sbjct: 1 MDKKKALDAALSQIERSFGKGSIMRLGQKEGVVEIETISTGSLSLDIALGVGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG VDAEHA DP Y++ LGVD+ENL V QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLENLFVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+ GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED--V 324
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D++ V
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK----DKELVV 236
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G + RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + IV + GAW+SY QRL
Sbjct: 237 GNQTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGAWFSYNSQRL 296
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
GQGR+ A Q+LR++ + EIE +R + + L NV N E +
Sbjct: 297 GQGRENAKQFLREHAEIAAEIETALR---QNAGLLAIELLENVGADNIEND 344
>gi|395793295|ref|ZP_10472700.1| protein recA [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395431609|gb|EJF97627.1| protein recA [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 347
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKAKALNAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK+GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDAIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + +V + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGVVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHAEIATEIETALR 322
>gi|296129392|ref|YP_003636642.1| recA protein [Cellulomonas flavigena DSM 20109]
gi|296021207|gb|ADG74443.1| recA protein [Cellulomonas flavigena DSM 20109]
Length = 346
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 249/329 (75%), Gaps = 3/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+AA++ I+ FGKGSV RLG G A VE P+G + LD+ALG GGLP+GRI+E+
Sbjct: 6 DRSKALEAALSQIDRQFGKGSVMRLGDEGRAPVEVIPTGSIALDVALGIGGLPRGRIIEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y+K LGVD + L+V QPDNGE
Sbjct: 66 YGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDNGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 126 ALEIMDTLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALNA 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR +K +G E VG R
Sbjct: 186 SGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRMDIRRIETLK--EGTEPVGNRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D V + GAW++Y +LGQG+
Sbjct: 244 RVKVVKNKMAPPFKQAEFDILYGVGISREGSLIDMGVEHGFVRKSGAWFTYEGDQLGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ A ++LRDNP L E++K ++ + G+
Sbjct: 304 ENARKFLRDNPDLANELDKKIKEKLGIGA 332
>gi|188588142|ref|YP_001920632.1| recombinase A [Clostridium botulinum E3 str. Alaska E43]
gi|238689703|sp|B2V4I3.1|RECA_CLOBA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|188498423|gb|ACD51559.1| protein RecA [Clostridium botulinum E3 str. Alaska E43]
Length = 356
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 242/323 (74%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+++ +A++ AM I FGKGSV +LG ++ +GCL LD+ALG GG+PKGRIVE
Sbjct: 6 INKLKAIENAMGQIEKQFGKGSVMKLGEDSVLNIDAISTGCLDLDIALGIGGVPKGRIVE 65
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH AE QK GG +DAEHA DPSY++ LGVD ENLIV QPD GE
Sbjct: 66 IYGPESSGKTTIALHIAAEAQKKGGAVGFIDAEHALDPSYARNLGVDTENLIVSQPDTGE 125
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
LEIA+ + RSGAID+I VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G S
Sbjct: 126 QGLEIAEALVRSGAIDVIIVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGTIS 185
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K C IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL++R IK +GD VG R
Sbjct: 186 KTNCIAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDVRRIDSIK--QGDGIVGNR 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAEF+I++ EG+S+ G ++D +IV + GAW+SYGD RLGQG
Sbjct: 244 TRIKVTKNKVAPPFKQAEFDIMYNEGISREGNIVDVGVKEEIVQKSGAWFSYGDIRLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A QYL++NP + +IE +R
Sbjct: 304 RENAKQYLKENPEVALDIENQIR 326
>gi|218463763|ref|ZP_03503854.1| recombinase A [Rhizobium etli Kim 5]
Length = 362
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELALR 335
>gi|153938095|ref|YP_001391702.1| recombinase A [Clostridium botulinum F str. Langeland]
gi|384462713|ref|YP_005675308.1| recA protein [Clostridium botulinum F str. 230613]
gi|152933991|gb|ABS39489.1| recA protein [Clostridium botulinum F str. Langeland]
gi|295319730|gb|ADG00108.1| recA protein [Clostridium botulinum F str. 230613]
Length = 352
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM I FGKGS+ +LG VE+ +G L LD+ALG GG+P+GRI+EI
Sbjct: 8 EKLKAIEAAMGQIEKQFGKGSIMKLGEDSILNVESISTGSLDLDIALGIGGVPRGRIIEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK+GG A +DAEHA DPSY++ LGVD++NLIV QPD GE
Sbjct: 68 FGPESSGKTTVALHILAEAQKIGGAAAFIDAEHALDPSYARNLGVDIDNLIVSQPDTGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 128 ALEITEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGSINK 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 188 SKCVAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIDSIK--QGDQILGNRT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+K AEF+I++ EG+SK+G +LD ++V + G+W+SY D RLGQGR
Sbjct: 246 RVKINKNKVAPPFKMAEFDIMYNEGISKVGNILDVGVREELVDKSGSWFSYKDTRLGQGR 305
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L+DN + EIE +R
Sbjct: 306 ENAKQFLKDNMNIALEIENTIR 327
>gi|326803744|ref|YP_004321562.1| RecA protein [Aerococcus urinae ACS-120-V-Col10a]
gi|326651270|gb|AEA01453.1| RecA protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 371
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ+ALD A+ I +FGKG++ ++G + V T PSG L+LD+ALG GG P+GRI+E+
Sbjct: 8 NRQKALDQALKQIEKNFGKGAIMKMGESTDTQVSTVPSGSLSLDIALGVGGYPRGRIIEV 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AEVQK GG A +DAE+A DP Y++ALGVD++ L++ QPD GE
Sbjct: 68 YGPESSGKTTVALHAVAEVQKQGGIAAFIDAENALDPEYARALGVDIDELLLSQPDTGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 128 GLEIADALVSSGAIDIVVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSINK 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPE T GG ALKF++++RLE+R +IKS G + +G R
Sbjct: 188 TKTIAMFINQIREKVGVMFGNPETTPGGRALKFYSTIRLEVRRGERIKS--GQDIIGNRT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+S+ G ++D A MDI+ + G+WYSYGD R+GQGR
Sbjct: 246 KIKVVKNKVAPPFKVAEVDIMYGQGISQAGELVDLAADMDIIKKSGSWYSYGDDRIGQGR 305
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A YL +NP + +EI+ VR+
Sbjct: 306 ENAKLYLTENPDIFKEIDSKVRA 328
>gi|395777979|ref|ZP_10458492.1| protein recA [Bartonella elizabethae Re6043vi]
gi|423715905|ref|ZP_17690126.1| protein recA [Bartonella elizabethae F9251]
gi|395418288|gb|EJF84615.1| protein recA [Bartonella elizabethae Re6043vi]
gi|395429207|gb|EJF95281.1| protein recA [Bartonella elizabethae F9251]
Length = 347
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKDR--DMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + IV + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHAEIAAEIETALR 322
>gi|424910654|ref|ZP_18334031.1| protein RecA [Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392846685|gb|EJA99207.1| protein RecA [Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 362
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+++L++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDTANEIELALR 335
>gi|336321147|ref|YP_004601115.1| recA protein [[Cellvibrio] gilvus ATCC 13127]
gi|336104728|gb|AEI12547.1| recA protein [[Cellvibrio] gilvus ATCC 13127]
Length = 346
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 249/328 (75%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+AA++ I+ FGKGS+ RLG G A VE P+G + LD+ALG GGLP+GRI+EI
Sbjct: 6 DREKALEAALSQIDRQFGKGSIMRLGDEGRAPVEVIPTGSIALDVALGIGGLPRGRIIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 126 ALEIMDMLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALNS 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR +K +G E VG R
Sbjct: 186 SGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRMDIRRIETLK--EGTEAVGNRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D V + GAW++Y +LGQG+
Sbjct: 244 RVKVVKNKMAPPFKQAEFDILYGVGISREGSLIDMGVEHGFVRKSGAWFTYEGDQLGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ A ++LRDNP L EE++K ++ + G
Sbjct: 304 ENARKFLRDNPDLAEELDKKIKEKLGIG 331
>gi|452821172|gb|EME28206.1| recombination protein RecA [Galdieria sulphuraria]
Length = 396
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/324 (54%), Positives = 248/324 (76%), Gaps = 5/324 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+QRAL+ + I ++G+GS+ RLG VET PSG +TLD ALGGG P+GR+VEIFG
Sbjct: 61 KQRALEGVLQQIEKTYGRGSIMRLGEIESMKVETTPSGSVTLDAALGGGYPRGRLVEIFG 120
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLALHAIAEVQK GG A VDAEHA DP+Y ALGVD+++L+V QPD GEMAL
Sbjct: 121 PESSGKTTLALHAIAEVQKSGGVAAFVDAEHALDPAYGSALGVDIQSLLVSQPDTGEMAL 180
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PR+EIEG++ QQ+G QARLMS+ALRK++G+ S++
Sbjct: 181 EIVDQLVRSAAVDIVVIDSVAALVPRSEIEGDMNDQQMGAQARLMSKALRKITGSMSRSQ 240
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IFLNQ+R KIGV +G+PEVTSGG+ALK+++SVRL+IR +K ++VG+R +V
Sbjct: 241 CTVIFLNQLRQKIGVLFGSPEVTSGGMALKYYSSVRLDIRRKDTLK-----DNVGIRCKV 295
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
++ K+K++ P++ E I+FG+G+ GC+LD AE + +V+RKG+WYSYG + QG+D
Sbjct: 296 KIAKNKIAPPFRVVELNILFGKGIDTYGCLLDAAEELGLVIRKGSWYSYGGNNIAQGKDA 355
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMS 414
++Y++ + ++E VR ++
Sbjct: 356 CVEYMKAHSDFVSQLELQVRGKLA 379
>gi|384081678|ref|ZP_09992853.1| recombinase A [gamma proteobacterium HIMB30]
Length = 347
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 247/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R++ALDAA++ I FGKG+V R+G A + +G L LD+ALG GGLPKGRIVEI
Sbjct: 4 NRRKALDAALSQIERQFGKGAVMRMGDAPRESIPAISTGSLGLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IAE QK GG A +DAEHA DP Y+ LGV+V++L+V QPD GE
Sbjct: 64 YGPESSGKTTLTLQTIAECQKAGGTAAFIDAEHALDPVYAGKLGVNVDDLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG++D++ VDSV+ALTPRAEIEG++G +GLQARLMSQALRK++GN +
Sbjct: 124 ALEIADMLVRSGSVDILVVDSVAALTPRAEIEGDMGDTHVGLQARLMSQALRKITGNIKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR G +K +GDE VG
Sbjct: 184 SNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSVK--QGDEVVGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KVS P++QAEF++++G+G+ +G +LD +V + GAWYSY QR+GQG+
Sbjct: 242 RVKVVKNKVSPPFRQAEFQVMYGQGIYHMGEVLDLGVQEGLVEKSGAWYSYSGQRIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
A Q+L +N ++ +EIEK++R +
Sbjct: 302 ANAAQFLDENRVMADEIEKMLRDRL 326
>gi|197303184|ref|ZP_03168226.1| hypothetical protein RUMLAC_01907 [Ruminococcus lactaris ATCC
29176]
gi|197297724|gb|EDY32282.1| RecA protein [Ruminococcus lactaris ATCC 29176]
Length = 373
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 256/325 (78%), Gaps = 6/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++ALDAA+ + FGKG+V +LG +G + VET P+GCL+LDLALG GG+PKGR++E
Sbjct: 16 EKKKALDAAIAKLEKDFGKGAVMKLGESGAHVSVETVPTGCLSLDLALGLGGVPKGRVIE 75
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH I+EVQK GG A +DAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 76 VYGPESSGKTTVALHMISEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDELYISQPDSGD 135
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ M RSGAID+I +DSV+AL P+ EIEG++G +GLQARLMSQALRK++ S
Sbjct: 136 QALEIAETMVRSGAIDIIVIDSVAALVPKQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 195
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD-EDVGV 326
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R +I+++K + E VG
Sbjct: 196 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASVRMDVR---RIETLKQNGEIVGN 252
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R R+++ K+K++ P+K+AEF+I+FG+G+S+ G +LD A +DIV + GAWY+Y ++GQ
Sbjct: 253 RTRIKIVKNKIAPPFKEAEFDIMFGKGISREGDILDLASKIDIVKKSGAWYAYEGDKIGQ 312
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A YL +P + EEIE+ VR+
Sbjct: 313 GRENAKSYLESHPEVMEEIERKVRA 337
>gi|408378032|ref|ZP_11175631.1| recombinase A [Agrobacterium albertimagni AOL15]
gi|407748146|gb|EKF59663.1| recombinase A [Agrobacterium albertimagni AOL15]
Length = 362
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LG+ + VET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G G+QARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K +E
Sbjct: 190 TASISKSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKD--REE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP + +EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPAVSQEIEMALR 335
>gi|374332412|ref|YP_005082596.1| recombinase A [Pseudovibrio sp. FO-BEG1]
gi|359345200|gb|AEV38574.1| recombinase A [Pseudovibrio sp. FO-BEG1]
Length = 354
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +ALDAA++ I +FGKGS+ R+G +++ +G L+LD+ALG GGLPKGRI+E
Sbjct: 14 MDKNKALDAALSQIERAFGKGSIMRMGQGQAVEIQSVSTGSLSLDIALGIGGLPKGRIIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTTLALH +A Q+ GG VDAEHA DP Y++ LGV++++L++ QPD GE
Sbjct: 74 VYGPESSGKTTLALHTVASAQRDGGICAFVDAEHALDPVYARKLGVNIDDLLISQPDAGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ +DSV+ALTP+AE+EGE+G GLQARLMSQALRK++ + S
Sbjct: 134 QALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTASIS 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE VG +
Sbjct: 194 KSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKDR--DEIVGNQ 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQ EF+II+GEG+SK+G +LD IV + GAW+SY QRLGQG
Sbjct: 252 TRVKVVKNKLAPPFKQVEFDIIYGEGISKMGELLDLGVKGGIVEKSGAWFSYNSQRLGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + +LR+NP L EEIE +R
Sbjct: 312 RENSKTFLRENPELAEEIELAIR 334
>gi|153814514|ref|ZP_01967182.1| hypothetical protein RUMTOR_00728 [Ruminococcus torques ATCC 27756]
gi|317500555|ref|ZP_07958777.1| hypothetical protein HMPREF1026_00720 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089345|ref|ZP_08338245.1| recA [Lachnospiraceae bacterium 3_1_46FAA]
gi|336438741|ref|ZP_08618365.1| recA [Lachnospiraceae bacterium 1_1_57FAA]
gi|145848008|gb|EDK24926.1| RecA protein [Ruminococcus torques ATCC 27756]
gi|316898065|gb|EFV20114.1| hypothetical protein HMPREF1026_00720 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330405408|gb|EGG84943.1| recA [Lachnospiraceae bacterium 3_1_46FAA]
gi|336017873|gb|EGN47627.1| recA [Lachnospiraceae bacterium 1_1_57FAA]
Length = 363
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/330 (54%), Positives = 253/330 (76%), Gaps = 4/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++ALDAA+ + FGKG+V +LG +G + VET P+GCL+LD+ALG GG+PKGR++E
Sbjct: 6 EKKKALDAAIAKLEKDFGKGAVMKLGESGAHVAVETVPTGCLSLDIALGLGGVPKGRVIE 65
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH IAEVQK GG A +DAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 66 VYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDELYISQPDSGD 125
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ M RSGAID+I VDSV+AL PR EIEG++G +GLQARLMSQALRK++ S
Sbjct: 126 QALEIAETMARSGAIDIIVVDSVAALVPRQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 185
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R T +K + E VG
Sbjct: 186 KSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYASVRMDVRKTETLK--QSGEMVGNH 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R+++ K+K++ P+K+AEF+I+FG+G+SK G +LD A +D+V + GAWY+Y ++GQG
Sbjct: 244 TRIKIVKNKIAPPFKEAEFDIMFGKGISKEGDILDLATKLDLVKKSGAWYAYEGDKIGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
R+ A YL +P + EE+EK VR G+
Sbjct: 304 RENAKTYLSAHPEIMEELEKKVREHYQLGT 333
>gi|148380359|ref|YP_001254900.1| recombinase A [Clostridium botulinum A str. ATCC 3502]
gi|153932434|ref|YP_001384579.1| recombinase A [Clostridium botulinum A str. ATCC 19397]
gi|153937504|ref|YP_001388095.1| recombinase A [Clostridium botulinum A str. Hall]
gi|421836048|ref|ZP_16270639.1| recombinase A [Clostridium botulinum CFSAN001627]
gi|148289843|emb|CAL83951.1| RecA protein [Clostridium botulinum A str. ATCC 3502]
gi|152928478|gb|ABS33978.1| recA protein [Clostridium botulinum A str. ATCC 19397]
gi|152933418|gb|ABS38917.1| recA protein [Clostridium botulinum A str. Hall]
gi|409742161|gb|EKN41672.1| recombinase A [Clostridium botulinum CFSAN001627]
Length = 352
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/347 (53%), Positives = 257/347 (74%), Gaps = 7/347 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM I FGKGS+ +LG VE+ +G L LD+ALG GG+P+GRI+EI
Sbjct: 8 EKLKAIEAAMGQIEKQFGKGSIMKLGEDSILNVESISTGSLDLDIALGIGGVPRGRIIEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK+GG A +DAEHA DPSY++ LGVD++NLIV QPD GE
Sbjct: 68 FGPESSGKTTVALHILAEAQKIGGAAAFIDAEHALDPSYARNLGVDIDNLIVSQPDTGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 128 ALEITEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGSINK 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 188 SKCVAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIDSIK--QGDQILGNRT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+K AEF+I++ EG+SK+G +LD ++V + G+W+SY D RLGQGR
Sbjct: 246 RVKINKNKVAPPFKMAEFDIMYNEGISKVGNILDVGVREELVDKSGSWFSYKDTRLGQGR 305
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ A Q+L+DN + EIE +R V +N+++ N++E+
Sbjct: 306 ENAKQFLKDNMNIALEIENTIRKKHDLPVVDA----KNLNIENKKED 348
>gi|144900462|emb|CAM77326.1| RecA bacterial DNA recombination protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 358
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 246/328 (75%), Gaps = 3/328 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
D +DRQ+AL+AA++ I +FGKGS+ ++G E +G L LD+ALG GGLP+G
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKMGQKETVETEVVSTGSLGLDIALGIGGLPRG 69
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RI+EI+GPESSGKTTLALH +AE QK GG +DAEHA DPSY++ LGV++++L++ QP
Sbjct: 70 RIIEIYGPESSGKTTLALHVLAEAQKKGGTCAFIDAEHALDPSYARKLGVNLDDLLISQP 129
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEI D + RSGA+D++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK++
Sbjct: 130 DAGEQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLT 189
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
G+ SK+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVR+EIR G IK DE
Sbjct: 190 GSVSKSKTIVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMEIRRVGAIKDR--DEV 247
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
VG + RV+V K+K++ P+K +F+I++GEG+SK G ++D ++V + GAW+SY R
Sbjct: 248 VGNQTRVKVVKNKLAPPFKVVDFDIMYGEGISKTGELIDLGVKANVVEKSGAWFSYNSTR 307
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+GQGR+ A Q+LRDNP + EIE +R+
Sbjct: 308 VGQGRENAKQFLRDNPAMAGEIEATIRA 335
>gi|56963964|ref|YP_175695.1| recombinase A [Bacillus clausii KSM-K16]
gi|59798129|sp|Q5WFX1.1|RECA_BACSK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56910207|dbj|BAD64734.1| recombination protein A [Bacillus clausii KSM-K16]
Length = 350
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I FGKGS+ +LG V T SG L LD+ALG GG PKGR++E+
Sbjct: 3 DRKQALDMALRHIEKQFGKGSIMKLGEQAEQRVSTVSSGTLALDIALGVGGYPKGRVIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQRNGGQAAFIDAEHALDPVYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K +G+E VG R
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEALK--QGNEIVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++GEG+S+ G MLD A +DIV + GAWYSY RLGQGR
Sbjct: 241 KIKVVKNKVAPPFRLAEVDIMYGEGISREGSMLDIASELDIVEKSGAWYSYKGDRLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ + Q+L++NP + EIE+++R
Sbjct: 301 ENSKQFLKENPEITAEIERLIR 322
>gi|154248001|ref|YP_001418959.1| recombinase A [Xanthobacter autotrophicus Py2]
gi|154162086|gb|ABS69302.1| recA protein [Xanthobacter autotrophicus Py2]
Length = 361
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I FGKGS+ RLG G AL +E+ P+G L LD+A+G GGLPKGR+V
Sbjct: 14 MDKTKALDAALSQIERHFGKGSIMRLGKGGKALEIESVPTGSLGLDIAIGIGGLPKGRVV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV++++L++ QPD G
Sbjct: 74 EIFGPESSGKTTLALHTVAEAQKRGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+ALTPRAE++GE+G Q G+QARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDSQPGMQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGMIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEG+SK G +LD +V + GAW+S+ QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGEGISKTGELLDLGVKAGVVEKSGAWFSHDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +L+ N + IE +R
Sbjct: 312 GRENAKTFLKQNQEIAGRIEAAIR 335
>gi|163868622|ref|YP_001609831.1| recombinase A [Bartonella tribocorum CIP 105476]
gi|189039590|sp|A9IVY9.1|RECA_BART1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|161018278|emb|CAK01836.1| RecA protein [Bartonella tribocorum CIP 105476]
Length = 347
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + IV + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHAEIAAEIETALR 322
>gi|333369804|ref|ZP_08461900.1| recombination protein A [Psychrobacter sp. 1501(2011)]
gi|332969626|gb|EGK08643.1| recombination protein A [Psychrobacter sp. 1501(2011)]
Length = 350
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +AL AA+ I FGK ++ LG AL V+ +G L LD+ALG GGLPKGRIVE
Sbjct: 4 NKAKALKAALGQIEKQFGKNTIMHLGDNSAALDVDVVSTGSLGLDIALGIGGLPKGRIVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L AIAE QK GG +DAEHA DP Y++ LGV+ ++L+V QPDNGE
Sbjct: 64 IYGPESSGKTTLTLQAIAECQKQGGTCAFIDAEHALDPVYARKLGVNTDDLLVSQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D+I +DSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GNA
Sbjct: 124 QALEITDMLVRSGALDMIVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +KS GDE +G +
Sbjct: 184 RSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKS--GDEIIGNQ 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++QAEFEI +GEG + L ++D + +V + GAWYSYGD+++GQG
Sbjct: 242 TRVKVIKNKMAPPFRQAEFEITYGEGTNHLAEVIDLGVEIGVVGKAGAWYSYGDEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
+ ++ +L+DNP + EEIE +R+
Sbjct: 302 KANSVLFLKDNPAIAEEIEAKIRA 325
>gi|218675164|ref|ZP_03524833.1| recombinase A [Rhizobium etli GR56]
Length = 349
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 181 SKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LRDNP L EIE +R
Sbjct: 299 GRENAKTFLRDNPDLAREIELALR 322
>gi|254292634|ref|YP_003058657.1| recA protein [Hirschia baltica ATCC 49814]
gi|254041165|gb|ACT57960.1| recA protein [Hirschia baltica ATCC 49814]
Length = 364
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 247/324 (76%), Gaps = 3/324 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+Q+AL+ A+ I +FGKGS+ RLG VE +G L+LD+ALG GGLPKGRI+E
Sbjct: 14 MDKQKALETALGQIERNFGKGSIMRLGDNASMDVEAVSTGSLSLDIALGIGGLPKGRIIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH IAE QK GG A VDAEHA DP Y+ LGVD+ +L+V QPD GE
Sbjct: 74 IYGPESSGKTTLALHCIAEAQKNGGVAAFVDAEHALDPIYAGKLGVDLGDLLVSQPDTGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
+LEIAD + RSGA+D++ +DSV+ALTPRAE+EGE+G GLQARLMSQALRK++G+ S
Sbjct: 134 QSLEIADTLVRSGAVDVLVIDSVAALTPRAELEGEMGDSLPGLQARLMSQALRKLTGSIS 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G +K DE +G +
Sbjct: 194 KSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGALKDR--DEVIGNQ 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++Q EF+II+GEG+SK G ++D +V + G+WYSYG +R+GQG
Sbjct: 252 TRVKVVKNKVAPPFRQVEFDIIYGEGISKTGELIDLGVKAGVVDKAGSWYSYGSERIGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A +L+ NP + EIE+ +R+
Sbjct: 312 RENARTFLKANPSIAAEIEEKIRA 335
>gi|29829034|ref|NP_823668.1| recombinase A [Streptomyces avermitilis MA-4680]
gi|37537927|sp|Q82KB1.1|RECA_STRAW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|29606140|dbj|BAC70203.1| putative recombination protein RecA [Streptomyces avermitilis
MA-4680]
Length = 377
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/329 (55%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|359790738|ref|ZP_09293620.1| recombinase A [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253328|gb|EHK56478.1| recombinase A [Mesorhizobium alhagi CCNWXJ12-2]
Length = 362
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +ALDAA++ I +FGKGS+ RLG+ + +ET P+G L LD+ALG GGLP+
Sbjct: 10 EDKSVDKSKALDAALSQIERAFGKGSIMRLGANEKIVEIETVPTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEICDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + S++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K DE
Sbjct: 190 TASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKDR--DE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D +V + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPDTAREIELALR 335
>gi|190892009|ref|YP_001978551.1| recombinase A [Rhizobium etli CIAT 652]
gi|417105487|ref|ZP_11961728.1| recombinase A protein [Rhizobium etli CNPAF512]
gi|238692491|sp|B3PPU4.1|RECA_RHIE6 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|190697288|gb|ACE91373.1| recombinase A protein [Rhizobium etli CIAT 652]
gi|327190520|gb|EGE57614.1| recombinase A protein [Rhizobium etli CNPAF512]
Length = 362
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELALR 335
>gi|375012424|ref|YP_004989412.1| protein RecA [Owenweeksia hongkongensis DSM 17368]
gi|359348348|gb|AEV32767.1| protein RecA [Owenweeksia hongkongensis DSM 17368]
Length = 331
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/319 (58%), Positives = 243/319 (76%), Gaps = 3/319 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL M+ ++ ++GKG+V R+G + VE+ SG L LD+ALG G PKGR+VEI+GP
Sbjct: 10 KALQLTMDKMDKTYGKGAVMRMGDSPVVSVESISSGSLGLDVALGIAGYPKGRVVEIYGP 69
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTL LHAIAE QK GG A +DAEHAFD +Y++ LG++ E LI+ QPDNGE ALE
Sbjct: 70 ESSGKTTLTLHAIAETQKKGGIAAFIDAEHAFDRTYAENLGINTEELIISQPDNGEQALE 129
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD + RSGAIDLI +DSV+ALTP+AEIEGE+G ++GLQARLMSQALRK++ SK C
Sbjct: 130 IADNLIRSGAIDLIVIDSVAALTPKAEIEGEMGDSKMGLQARLMSQALRKLTSTISKTNC 189
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR +IK D +G R RV+
Sbjct: 190 CCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRASQIKD--NDGVIGNRTRVK 247
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+KV+ P+KQAEF+I++G+G+SK+G ++D +IV + G+W+SYGD +LGQGRD
Sbjct: 248 VVKNKVAPPFKQAEFDIMYGQGISKVGEIIDLGVDHEIVKKSGSWFSYGDTKLGQGRDAV 307
Query: 392 LQYLRDNPLLQEEIEKVVR 410
Q L DNP L +EIE ++R
Sbjct: 308 KQLLLDNPELADEIEGLIR 326
>gi|254692312|emb|CBA10404.1| recombinase A [Agrobacterium larrymoorei]
Length = 323
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP + EIE
Sbjct: 301 GRENAKGFLRDNPAVANEIE 320
>gi|283481769|emb|CBA10139.1| recombinase A [Agrobacterium larrymoorei]
Length = 323
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP + EIE
Sbjct: 301 GRENAKGFLRDNPAVANEIE 320
>gi|440226825|ref|YP_007333916.1| recombination protein RecA [Rhizobium tropici CIAT 899]
gi|440038336|gb|AGB71370.1| recombination protein RecA [Rhizobium tropici CIAT 899]
Length = 361
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKIFLRDNPDLSREIELSLR 335
>gi|406884802|gb|EKD32143.1| hypothetical protein ACD_77C00170G0009 [uncultured bacterium]
Length = 344
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/327 (54%), Positives = 248/327 (75%), Gaps = 3/327 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL A ++ + +GKG+V ++G + T SG + LD ALG GG P+GR++EI
Sbjct: 17 DKLKALQATLDKLEKDYGKGTVMKMGEQPKWEISTIGSGSIALDHALGIGGYPRGRVIEI 76
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA+HA+AE QKLGG A ++DAEHAFD +Y+K LGV+V+ L++ QPDNGE
Sbjct: 77 YGPESSGKTTLAIHAVAEAQKLGGIAAIIDAEHAFDRTYAKNLGVNVDTLLISQPDNGEQ 136
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGAID+I +DSV+ALTP+AEIEGE+G ++GLQARLMSQALRK++ N SK
Sbjct: 137 ALEITDALIRSGAIDIIVIDSVAALTPKAEIEGEMGDSKMGLQARLMSQALRKLTANISK 196
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQ+R KIGV +GNPEVT+GG ALKF+ASVR+++R +IK G+E G RV
Sbjct: 197 TNTCCIFINQLREKIGVMFGNPEVTTGGNALKFYASVRVDVRKITQIKD--GEEATGNRV 254
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R ++ K+K+S P+++AEF+I+FGEG+SK+G ++D +I+ + G+W+SYGD +L QGR
Sbjct: 255 RAKIVKNKMSPPFRKAEFDIVFGEGISKIGEIVDLGVEFEIIKKSGSWFSYGDSKLAQGR 314
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSD 415
D Q L DNP L +EIE +R +++
Sbjct: 315 DAVKQVLTDNPALMDEIEAKIRLKLTE 341
>gi|395779782|ref|ZP_10460251.1| protein recA [Bartonella washoensis 085-0475]
gi|395420157|gb|EJF86442.1| protein recA [Bartonella washoensis 085-0475]
Length = 347
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRI+
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTSAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C ++F+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDAIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHEEIATEIETALR 322
>gi|295696220|ref|YP_003589458.1| recA protein [Kyrpidia tusciae DSM 2912]
gi|295411822|gb|ADG06314.1| recA protein [Kyrpidia tusciae DSM 2912]
Length = 351
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
DR+ ALD A+ I FGKGS+ +LG A ++ VE +G L LD+ALG GG P+GR++E
Sbjct: 3 DRKAALDMALRQIEKQFGKGSIMKLGEAQASMNVEVVSTGALALDIALGVGGFPRGRVIE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHAIAEVQKLGG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 IYGPESSGKTTVALHAIAEVQKLGGQAAFIDAEHALDPVYARNLGVNIDELLISQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGA+D+I +DSV+AL P+AE+EG++G +GLQARLMSQALRK+SG S
Sbjct: 123 QALEIAEALVRSGAVDIIVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKLSGAIS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ IF+NQIR K+GV +GNPE T+GG ALKF++SVRLE+R +K +G+E +G R
Sbjct: 183 KSRTIAIFINQIREKVGVMFGNPETTTGGRALKFYSSVRLEVRRAEALK--QGNELIGNR 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQA+ +I+FGEG+S+ G ++D MD++ + GAWYS+ +RLGQG
Sbjct: 241 TRIKVVKNKVAPPFKQADVDIMFGEGISREGSIVDLGVEMDVIEKSGAWYSFEGERLGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSM 412
R+ A Q+L+++P + + IE +RSM
Sbjct: 301 RENAKQFLKEHPEIADRIEGKIRSM 325
>gi|229916160|ref|YP_002884806.1| recA protein [Exiguobacterium sp. AT1b]
gi|259563336|sp|C4L2V3.1|RECA_EXISA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|229467589|gb|ACQ69361.1| recA protein [Exiguobacterium sp. AT1b]
Length = 349
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+ A+ I FGKGS+ RLG V PSG + LD+ALG GG P+GR++E+
Sbjct: 3 DRKQALEMALRQIEKQFGKGSIMRLGENTDQQVSVIPSGSIALDVALGAGGYPRGRVIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A VDAEHA DP Y+K LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKRGGQAAFVDAEHALDPKYAKNLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGATNK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIG+ +GNPE T GG ALKF++SVRLE+R +K +G + VG R
Sbjct: 183 SKTIVIFINQIREKIGIMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGQDMVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
++++ K+K++ P+K AE +I++GEG+S+ G ++D +DIV + GAWYS+ ++RLGQGR
Sbjct: 241 KIKIVKNKIAPPFKTAEVDIMYGEGISREGELIDIGADLDIVQKSGAWYSFNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QY+++NP + E+E+ +R
Sbjct: 301 ENAKQYMKENPAIAAEVEQQIR 322
>gi|297617235|ref|YP_003702394.1| recA protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145072|gb|ADI01829.1| recA protein [Syntrophothermus lipocalidus DSM 12680]
Length = 340
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 243/325 (74%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR AL++A+ I FG+GS+ +LG A V P+GCL+LD+ALG GGLP+GR+VEI
Sbjct: 6 DRLEALESAIRKIEKDFGRGSIMKLGEAAAMNVAVVPTGCLSLDMALGVGGLPRGRVVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH IAE QK GG A +D EHA DP Y+K LGV++ +L+V QPD GE
Sbjct: 66 FGPESSGKTTVALHVIAEAQKDGGIAAFIDVEHALDPLYAKRLGVNINDLLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AE+EGE+G +GLQARLMSQALRK++G SK
Sbjct: 126 ALEIAEALVRSGAVDVLVVDSVAALVPKAELEGEMGDIHVGLQARLMSQALRKLTGTISK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV YGNPE T GG ALKF+ASVRLE+R IK +G E VG R
Sbjct: 186 SRTCAIFINQIREKVGVVYGNPETTPGGRALKFYASVRLEVRKVDNIK--QGTETVGSRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++GEG+SK G +LD + I+ + GAWYSY +R+GQGR
Sbjct: 244 RVKVVKNKVAPPFKQAEFDIMYGEGISKEGDLLDLGVELKILQKSGAWYSYEGERIGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +LR NP + +E+E +R+ +
Sbjct: 304 ENVKDFLRANPDVFKEVESRIRTAL 328
>gi|240850807|ref|YP_002972207.1| recombinase A [Bartonella grahamii as4aup]
gi|240267930|gb|ACS51518.1| recombinase A [Bartonella grahamii as4aup]
Length = 347
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C ++F+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDAIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHAEIATEIESALR 322
>gi|150396733|ref|YP_001327200.1| recombinase A [Sinorhizobium medicae WSM419]
gi|166220683|sp|A6U9N5.1|RECA_SINMW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|150028248|gb|ABR60365.1| recA protein [Sinorhizobium medicae WSM419]
Length = 361
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I +FGKGS+ +LG+ + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERAFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+AL PRAEIEGE+G G+QARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPELLREIETALR 335
>gi|255281677|ref|ZP_05346232.1| protein RecA [Bryantella formatexigens DSM 14469]
gi|255267744|gb|EET60949.1| RecA protein [Marvinbryantia formatexigens DSM 14469]
Length = 387
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/323 (54%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA++ I FGKGSV +LG +G L VET P+G L+LD+ALG GG+PKGRIVE
Sbjct: 5 EKMKALDAALSQIEKQFGKGSVMKLGDSGKNLNVETVPTGSLSLDIALGLGGIPKGRIVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+ +GVD++NL + QPDNGE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGVAGFIDAEHALDPVYASRIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
A+EI + + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QAMEITETLVRSGAVDIIIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R KIGV +GNPE T+GG ALKF++S+RL++R +K + E +G
Sbjct: 185 KSNCIVIFINQLREKIGVMFGNPETTTGGRALKFYSSIRLDVRKGEALK--QAGEVIGNH 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+K++ P+K+AEF+I+FG+G+S+ G ++D A + ++ + GAWY+Y D ++GQG
Sbjct: 243 TRIKVVKNKIAPPFKEAEFDIMFGQGISREGDIIDLAANIGVINKSGAWYAYNDAKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A YLR+NP + +E+E VR
Sbjct: 303 RENAKAYLRENPAIMDEVEAKVR 325
>gi|126698927|ref|YP_001087824.1| recombinase A [Clostridium difficile 630]
gi|254974873|ref|ZP_05271345.1| RecA protein (recombinase A) [Clostridium difficile QCD-66c26]
gi|255092260|ref|ZP_05321738.1| RecA protein (recombinase A) [Clostridium difficile CIP 107932]
gi|255100349|ref|ZP_05329326.1| RecA protein (recombinase A) [Clostridium difficile QCD-63q42]
gi|255306286|ref|ZP_05350457.1| RecA protein (recombinase A) [Clostridium difficile ATCC 43255]
gi|255314000|ref|ZP_05355583.1| RecA protein (recombinase A) [Clostridium difficile QCD-76w55]
gi|255516680|ref|ZP_05384356.1| RecA protein (recombinase A) [Clostridium difficile QCD-97b34]
gi|255649779|ref|ZP_05396681.1| RecA protein (recombinase A) [Clostridium difficile QCD-37x79]
gi|260682936|ref|YP_003214221.1| recombinase A [Clostridium difficile CD196]
gi|260686534|ref|YP_003217667.1| RecA protein (recombinase A) [Clostridium difficile R20291]
gi|306519883|ref|ZP_07406230.1| RecA protein (recombinase A) [Clostridium difficile QCD-32g58]
gi|384360523|ref|YP_006198375.1| recombinase A [Clostridium difficile BI1]
gi|423082283|ref|ZP_17070875.1| RecA protein [Clostridium difficile 002-P50-2011]
gi|423087675|ref|ZP_17076061.1| RecA protein [Clostridium difficile 050-P50-2011]
gi|423090916|ref|ZP_17079202.1| RecA protein [Clostridium difficile 70-100-2010]
gi|122974146|sp|Q18BJ4.1|RECA_CLOD6 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|115250364|emb|CAJ68186.1| Protein RecA (Recombinase A) [Clostridium difficile 630]
gi|260209099|emb|CBA62262.1| RecA protein (recombinase A) [Clostridium difficile CD196]
gi|260212550|emb|CBE03518.1| RecA protein (recombinase A) [Clostridium difficile R20291]
gi|357543989|gb|EHJ25995.1| RecA protein [Clostridium difficile 050-P50-2011]
gi|357548609|gb|EHJ30469.1| RecA protein [Clostridium difficile 002-P50-2011]
gi|357556031|gb|EHJ37653.1| RecA protein [Clostridium difficile 70-100-2010]
Length = 348
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/334 (54%), Positives = 251/334 (75%), Gaps = 3/334 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+ A+ I FGKGSV +LG A ++ +G + LD+A+G GGLP+GRIVE+
Sbjct: 6 EKLKALNEALGKIEKDFGKGSVMKLGEATSMSIDVISTGAIGLDIAIGIGGLPRGRIVEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+AL +A QK GG A +DAEHA DP Y+KALGVDV+NLI+ QPD GE
Sbjct: 66 YGPESSGKTTVALSCVASAQKDGGIAAFIDAEHALDPVYAKALGVDVDNLIISQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I +DSV+AL P+AEI+G++G +GLQARLMSQALRK++G+ K
Sbjct: 126 ALEIAEALIRSGAIDIIVIDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTGSIKK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T+GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 186 SNCVAIFINQLREKVGIMFGNPETTTGGRALKFYSSVRLDVRKIDTIK--QGDKVIGSRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++GEG+SK+G +LD A +DIV + G+WYSY D +LGQGR
Sbjct: 244 RVKVVKNKVAPPFKQAEFDIMYGEGISKIGDLLDIAADVDIVKKSGSWYSYNDTKLGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
+ ++L DN L EI++ VR+ + H+ S
Sbjct: 304 ENVKKFLEDNLDLTTEIDEKVRAFYNLNEEHEES 337
>gi|335040835|ref|ZP_08533956.1| Protein recA [Caldalkalibacillus thermarum TA2.A1]
gi|334179270|gb|EGL81914.1| Protein recA [Caldalkalibacillus thermarum TA2.A1]
Length = 352
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/354 (54%), Positives = 255/354 (72%), Gaps = 14/354 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAG-GALVETFPSGCLTLDLALG-GGLPKGRIVE 147
DR+ ALD A+ I FGKGS+ +LG A V T SG L LD+ALG GG P+GRIVE
Sbjct: 4 DRRAALDMALRQIEKQFGKGSIMKLGEAAVNNQVSTISSGSLALDIALGVGGYPRGRIVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHAIAE QK+GG A +DAEHA DP Y+K LGV+++ L++ QPD GE
Sbjct: 64 IYGPESSGKTTVALHAIAEAQKMGGQAAFIDAEHALDPQYAKNLGVNIDELLLSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG S
Sbjct: 124 QALEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAIS 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ IF+NQIR K+GV +GNPE T GG ALKF+AS+RL++R IK +G++ +G +
Sbjct: 184 KSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYASIRLDVRRAETIK--QGNDLIGNK 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
+++V K+KV+ P+K + +I++GEG+S+ G +LD A +DI+ + GAWYSY DQRLGQG
Sbjct: 242 TKIKVVKNKVAPPFKSCDVDIMYGEGISREGSVLDMASDLDIIQKSGAWYSYNDQRLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLP-NQEENILEEF 440
R+ A QYL ++P L EIE +R H G L V+ P NQ + + EE
Sbjct: 302 RENAKQYLVEHPDLCLEIENKIRQ-------HFG--LEAVTYPENQNQEVKEEL 346
>gi|304321908|ref|YP_003855551.1| recombinase A [Parvularcula bermudensis HTCC2503]
gi|303300810|gb|ADM10409.1| recombinase A [Parvularcula bermudensis HTCC2503]
Length = 360
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I+ +FGKGSV +LGS + +E +G L LD+ALG GGLPKGRIV
Sbjct: 12 MDKSKALEAALSQIDKAFGKGSVMKLGSQDKIVQIEGISTGSLGLDIALGIGGLPKGRIV 71
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH AE QK GG A +DAEHA DP Y+ LGV ++ L++ QPD G
Sbjct: 72 EIYGPESSGKTTLALHCAAESQKAGGTAAFIDAEHALDPIYASKLGVKLDELLISQPDTG 131
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ +DSV+ALTP+AE+EGE+G GLQARLMSQALRK++G+
Sbjct: 132 EQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTGSI 191
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K+ DE +G
Sbjct: 192 SRSNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGALKAR--DEVIGN 249
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD + +IV + G+WYSY +R+GQ
Sbjct: 250 QTRVKVVKNKVAPPFKQVEFDIMYGEGISKVGELLDLGVLGNIVEKSGSWYSYNSERIGQ 309
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GRD A +L+DNP + IE+ VR
Sbjct: 310 GRDNAKSFLKDNPDIAAAIEQAVR 333
>gi|207366288|emb|CAQ58039.1| recombinase A [Agrobacterium tumefaciens]
gi|207366290|emb|CAQ58040.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/320 (59%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIV
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIV 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+++L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPETANEIE 320
>gi|371776311|ref|ZP_09482633.1| recombinase A [Anaerophaga sp. HS1]
Length = 351
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/321 (56%), Positives = 251/321 (78%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL ++ I+ ++GKG++ R+G + V +F SG + LD ALG GG P+GR++EI
Sbjct: 23 EKLKALQLTIDKIDKTYGKGAIMRMGESVAENVPSFSSGSIALDRALGVGGYPRGRVIEI 82
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA+HA+AEVQKLGG A ++DAEHAFD Y++ LGVDVENL++ QPDNGE
Sbjct: 83 YGPESSGKTTLAIHAMAEVQKLGGIAAIIDAEHAFDRFYAEKLGVDVENLLISQPDNGEQ 142
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD++ RS AIDL+ VDSV+ALTP+AEIEGE+G ++GLQARLMSQALRK++ N SK
Sbjct: 143 ALEIADQLIRSSAIDLVVVDSVAALTPKAEIEGEMGDNKMGLQARLMSQALRKLTSNISK 202
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR +IK+ G+E +G
Sbjct: 203 TNTCCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRVSQIKN--GEEVIGSHT 260
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF+I++GEG+SK+G ++D I+ + G+W+SYG+ +LGQGR
Sbjct: 261 RVKVVKNKVAPPFRKAEFDIMYGEGISKVGEIIDLGVEHGIIKKSGSWFSYGETKLGQGR 320
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
+ + +RDNP L +E+EK +
Sbjct: 321 EAVKEVIRDNPELADELEKKI 341
>gi|372220690|ref|ZP_09499111.1| recombinase A [Mesoflavibacter zeaxanthinifaciens S86]
Length = 335
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 248/325 (76%), Gaps = 2/325 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G + VE PSG L LDLALG G PKGRI+EI+
Sbjct: 8 KLKALKLTLDKLDKTYGKGAVMKMGDSVVEDVEVIPSGSLGLDLALGVSGYPKGRIIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHA+AE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPD+GE A
Sbjct: 68 GPESSGKTTLTLHAMAEAQKAGGIAAFIDAEHAFDRFYAQKLGVDIDNLIISQPDHGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ SK
Sbjct: 128 LEIADNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTSTISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IKS G E +G + R
Sbjct: 188 QCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKSTDG-EVMGNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P+K AEF+I++GEGVSK+G +LD +I+ + G+W+SYGD +LGQGRD
Sbjct: 247 VKVVKNKVAPPFKTAEFDIMYGEGVSKVGEILDLGVAYEIIKKSGSWFSYGDTKLGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMS 414
+ DNP L EE+E ++ ++
Sbjct: 307 AVKTLIDDNPELAEELEGKIKEAIA 331
>gi|254470359|ref|ZP_05083763.1| protein RecA [Pseudovibrio sp. JE062]
gi|211960670|gb|EEA95866.1| protein RecA [Pseudovibrio sp. JE062]
Length = 354
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 246/323 (76%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +ALDAA++ I +FGKGS+ R+G +++ +G L+LD+ LG GGLPKGRI+E
Sbjct: 14 MDKNKALDAALSQIERAFGKGSIMRMGQGQAVEIQSVSTGSLSLDIGLGIGGLPKGRIIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH +A Q+ GG VDAEHA DP Y++ LGV++++L++ QPD GE
Sbjct: 74 IYGPESSGKTTLALHTVASAQREGGICAFVDAEHALDPVYARKLGVNIDDLLISQPDAGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ +DSV+ALTP+AE+EGE+G GLQARLMSQALRK++ + S
Sbjct: 134 QALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTASIS 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK DE VG +
Sbjct: 194 KSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKDR--DEIVGNQ 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQ EF+II+GEG+SK+G +LD IV + GAW+SY QRLGQG
Sbjct: 252 TRVKVVKNKLAPPFKQVEFDIIYGEGISKMGELLDLGVKGGIVEKSGAWFSYNSQRLGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + +LR+NP L EEIE +R
Sbjct: 312 RENSKTFLRENPELAEEIELAIR 334
>gi|28210974|ref|NP_781918.1| recombinase A [Clostridium tetani E88]
gi|37537945|sp|Q895I5.1|RECA_CLOTE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|28203413|gb|AAO35855.1| recA protein [Clostridium tetani E88]
Length = 350
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/322 (56%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM +I FGKGSV +LG +E +GCL +D+ALG GG+PKGRIVEI
Sbjct: 4 EKLKAIEAAMGNIEKQFGKGSVMKLGEKNILDIEAISTGCLGMDIALGIGGVPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH IAE QK GG A +DAEHA DPSY++ LGVD++NLIV QPD GE
Sbjct: 64 YGPESSGKTTVALHIIAEAQKNGGVAAFIDAEHALDPSYARKLGVDIDNLIVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RS AID++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++G+ +K
Sbjct: 124 GLEIAEALVRSNAIDIVVVDSVAALVPKAEIQGEMGDSHVGLQARLMSQALRKLAGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +G+PE T GG ALKF++SVRL++R IK +GDE +G R
Sbjct: 184 SNCVAIFINQLREKVGIMFGSPETTPGGRALKFYSSVRLDVRRIDTIK--QGDEFLGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+K AEF+I++ EG+S+ G +LD +IV + G+W+SY D RLGQGR
Sbjct: 242 RVKVTKNKVAPPFKNAEFDIMYNEGISRTGDVLDLGVKEEIVQKSGSWFSYNDVRLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L+DNP L EIE +R
Sbjct: 302 ENAKQFLKDNPELLYEIENTIR 323
>gi|78485933|ref|YP_391858.1| recA protein [Thiomicrospira crunogena XCL-2]
gi|123741557|sp|Q31F89.1|RECA_THICR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|78364219|gb|ABB42184.1| RecA protein [Thiomicrospira crunogena XCL-2]
Length = 347
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/326 (55%), Positives = 247/326 (75%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL+AA+ I FGKGS+ R+G G +++ +G L LD+ALG GGLP+GR+VE
Sbjct: 4 NKKKALEAALGQIEKQFGKGSIMRMGDKGAIRDIDSVSTGSLGLDVALGIGGLPRGRVVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LHAIAE+QK+GG A VDAEHA DP Y++ LGVD++NL+V QPD GE
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPIYAEKLGVDIDNLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N
Sbjct: 124 QALEITDSLVRSGAVDIVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+ +IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR G IK KGDE +G
Sbjct: 184 RTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIK--KGDEILGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KVS P+KQ EFEI++G+G+S+ G ++D ++ + GAWYSY Q++GQG
Sbjct: 242 TRVKVVKNKVSPPFKQVEFEILYGQGISREGEVIDLGVKEKLIEKAGAWYSYQGQKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+D Q+L+DNP + E ++ ++ +
Sbjct: 302 KDNVRQFLKDNPDIYETLQVQIKERL 327
>gi|170755068|ref|YP_001781947.1| recombinase A [Clostridium botulinum B1 str. Okra]
gi|170761563|ref|YP_001787715.1| recombinase A [Clostridium botulinum A3 str. Loch Maree]
gi|169120280|gb|ACA44116.1| recA protein [Clostridium botulinum B1 str. Okra]
gi|169408552|gb|ACA56963.1| recA protein [Clostridium botulinum A3 str. Loch Maree]
Length = 355
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/347 (52%), Positives = 257/347 (74%), Gaps = 7/347 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM I FGKGS+ +LG VE+ +G L LD+ALG GG+P+GRI+EI
Sbjct: 11 EKLKAIEAAMGQIEKQFGKGSIMKLGEDSILNVESISTGSLDLDIALGIGGVPRGRIIEI 70
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK+GG A +DAEHA DP+Y++ LGVD++NLIV QPD GE
Sbjct: 71 FGPESSGKTTVALHILAEAQKIGGAAAFIDAEHALDPAYARNLGVDIDNLIVSQPDTGEQ 130
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 131 ALEITEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGSINK 190
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 191 SKCVAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIDSIK--QGDQILGNRT 248
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+K AEF+I++ EG+SK+G +LD ++V + G+W+SY D RLGQGR
Sbjct: 249 RVKINKNKVAPPFKMAEFDIMYNEGISKVGNILDVGVREELVDKSGSWFSYKDTRLGQGR 308
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ A Q+L+DN + EIE +R V +N+++ N++E+
Sbjct: 309 ENAKQFLKDNMNIALEIENTIRKKHDLPVVDA----KNLNIENKKED 351
>gi|114771070|ref|ZP_01448510.1| recombinase A [Rhodobacterales bacterium HTCC2255]
gi|114548352|gb|EAU51238.1| recombinase A [alpha proteobacterium HTCC2255]
Length = 362
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/343 (54%), Positives = 253/343 (73%), Gaps = 15/343 (4%)
Query: 71 EFDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGC 129
EF+GK + +D+++AL++A+ I FGKGS+ +LG L +E +G
Sbjct: 7 EFNGK-----------KSMDKEKALESALGQIERQFGKGSIMKLGDESARLDIEATSTGS 55
Query: 130 LTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYS 188
L LD+ALG GGLPKGRI+EI+GPESSGKTTL LHAIAE QK GG VDAEHA DP+Y+
Sbjct: 56 LGLDIALGIGGLPKGRIIEIYGPESSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPTYA 115
Query: 189 KALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQI 248
K LGVD++ L++ QPD GE ALEI D + RSGA+ ++ VDSV+ALTPRAE+EG++G Q+
Sbjct: 116 KRLGVDIDELLISQPDAGEQALEITDTLVRSGAVSMVVVDSVAALTPRAELEGDMGDHQV 175
Query: 249 GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLE 308
G QARLMSQA+RK++G+ +K+GC +IF+NQIR KIGV +G+PE TSGG ALKF++SVRL+
Sbjct: 176 GAQARLMSQAMRKLTGSIAKSGCMVIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRLD 235
Query: 309 IRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMD 368
IR G IK DE VG RV+V K+KVS P+KQ EF+I++G+G+SK G ++D +
Sbjct: 236 IRRIGAIKDR--DEIVGNHTRVKVVKNKVSPPFKQVEFDIMYGQGISKRGELIDLGVKLG 293
Query: 369 IVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
V + G+W+S GD+R+GQGR+ A YL+DNP + EIE +R+
Sbjct: 294 FVEKSGSWFSCGDERIGQGRENAKTYLKDNPKMAYEIEDKIRA 336
>gi|255655339|ref|ZP_05400748.1| RecA protein (recombinase A) [Clostridium difficile QCD-23m63]
gi|296451325|ref|ZP_06893065.1| recombination protein A [Clostridium difficile NAP08]
gi|296880323|ref|ZP_06904286.1| recombination protein A [Clostridium difficile NAP07]
gi|296259931|gb|EFH06786.1| recombination protein A [Clostridium difficile NAP08]
gi|296428564|gb|EFH14448.1| recombination protein A [Clostridium difficile NAP07]
Length = 348
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/332 (54%), Positives = 250/332 (75%), Gaps = 3/332 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+ A+ I FGKGSV +LG A ++ +G + LD+A+G GGLP+GRIVE+
Sbjct: 6 EKLKALNEALGKIEKDFGKGSVMKLGEATSMSIDVISTGAIGLDIAIGIGGLPRGRIVEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+AL +A QK GG A +DAEHA DP Y+KALGVDV+NLI+ QPD GE
Sbjct: 66 YGPESSGKTTVALSCVASAQKDGGIAAFIDAEHALDPVYAKALGVDVDNLIISQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I +DSV+AL P+AEI+G++G +GLQARLMSQALRK++G+ K
Sbjct: 126 ALEIAEALIRSGAIDIIVIDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTGSIKK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T+GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 186 SNCVAIFINQLREKVGIMFGNPETTTGGRALKFYSSVRLDVRKIDTIK--QGDKVIGSRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++GEG+SK+G +LD A +DIV + G+WYSY D +LGQGR
Sbjct: 244 RVKVVKNKVAPPFKQAEFDIMYGEGISKIGDLLDIAADVDIVKKSGSWYSYNDTKLGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQ 420
+ ++L DN L EI++ VR+ + H+
Sbjct: 304 ENVKKFLEDNLDLTNEIDEKVRAFYNLNEEHE 335
>gi|379728099|ref|YP_005320284.1| recombinase A [Melissococcus plutonius DAT561]
gi|376319002|dbj|BAL62789.1| RecA protein [Melissococcus plutonius DAT561]
Length = 362
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 242/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKGS+ +LG V T PSG L LD+ALG GG P+GRIVEI
Sbjct: 4 DRKTALDAALKKIEKNFGKGSIMKLGEKADQQVATVPSGSLALDVALGVGGYPRGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHAIAE+QK GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVSLHAIAEIQKQGGTAAFIDAEHALDPQYAQKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGAID++ VDSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ SK
Sbjct: 124 GLEIADALVSSGAIDIVVVDSVAALVPRAEIDGEMGASHVGLQARLMSQALRKLSGSISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE T GG ALKF+A+VRLE+R ++K +G + VG R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQLK--QGTDIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+S+ G +LD A DI+ + GAWYSY ++R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGQGISQEGELLDMAVEQDIIDKSGAWYSYNEERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ Y+ ++P + EEI K VR
Sbjct: 302 ENVKNYMIEHPEMVEEISKKVR 323
>gi|336437081|ref|ZP_08616790.1| RecA protein [Lachnospiraceae bacterium 1_4_56FAA]
gi|336006215|gb|EGN36251.1| RecA protein [Lachnospiraceae bacterium 1_4_56FAA]
Length = 390
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 253/324 (78%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++ALDAA+ + FGKG+V +LG +G + VET P+GCL+LDLALG GG+PKGR++E
Sbjct: 20 EKKKALDAAIAKLEKDFGKGAVMKLGESGAHVNVETVPTGCLSLDLALGLGGVPKGRVIE 79
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH IAEVQK GG A VDAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 80 VYGPESSGKTTIALHMIAEVQKRGGIAGFVDAEHALDPVYAKNIGVDIDELYISQPDSGD 139
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ M RSGAID+I +DSV+AL P+ EIEG++G +GLQARLMSQALRK++ S
Sbjct: 140 QALEIAETMVRSGAIDIIVIDSVAALVPKQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 199
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +G+PE T+GG ALKF+ASVR+++R +K + E VG R
Sbjct: 200 KSNCIVIFINQLREKVGVMFGSPETTTGGRALKFYASVRMDVRRIETLK--QSGEMVGNR 257
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R+++ K+K++ P+K+AEF+I+FG+GVSK G +LD A +D+V + G+WY+Y +++GQG
Sbjct: 258 TRIKIVKNKIAPPFKEAEFDIMFGKGVSKSGDILDLASGIDVVKKSGSWYAYEGEKIGQG 317
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL +P + +EIE+ VR+
Sbjct: 318 RENAKSYLESHPEMMDEIEQKVRA 341
>gi|418299453|ref|ZP_12911286.1| recombinase A [Agrobacterium tumefaciens CCNWGS0286]
gi|355534918|gb|EHH04214.1| recombinase A [Agrobacterium tumefaciens CCNWGS0286]
Length = 350
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/324 (58%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD G
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 181 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LRDNP EIE +R
Sbjct: 299 GRENAKTFLRDNPETANEIELALR 322
>gi|402771503|ref|YP_006591040.1| protein RecA (Recombinase A) [Methylocystis sp. SC2]
gi|401773523|emb|CCJ06389.1| Protein RecA (Recombinase A) [Methylocystis sp. SC2]
Length = 341
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 245/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG A+ +ET +G L LD+ALG GGLP+GR+V
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTL LH IAE QKLGG VDAEHA DP Y++ LGV++E+L++ QPD G
Sbjct: 61 EIYGPESSGKTTLTLHVIAEAQKLGGVCAFVDAEHALDPIYARKLGVNLEDLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G Q GLQARLMSQALRK++ +
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDVQPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+++ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK +E G
Sbjct: 181 ARSNTLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIKD--REETTGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+KV+ P+KQ EF+I++GEGVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKVAPPFKQVEFDIMYGEGVSKFGELIDLGVKAGVVEKSGAWFSYDSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +L+ NP + IE+ +R
Sbjct: 299 GRENAKSFLKQNPEAAQRIEQAIR 322
>gi|333985518|ref|YP_004514728.1| recombinase A [Methylomonas methanica MC09]
gi|333809559|gb|AEG02229.1| Protein recA [Methylomonas methanica MC09]
Length = 351
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 246/323 (76%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I FGKGSV R+G + +E +G L+LD+ALG GGLP+GR++E
Sbjct: 4 NKKKALGAALMQIEKQFGKGSVMRMGDVAASRDIEVVSTGSLSLDIALGVGGLPRGRVIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L IA++QKLGG A VDAEHA DP Y++ +GV++++L+V QPD GE
Sbjct: 64 IYGPESSGKTTLTLQTIAQMQKLGGTAAFVDAEHALDPVYAEKIGVNIDDLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N
Sbjct: 124 QALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 184 RSNTLVIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--KGDEVIGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQA+FEI++GEGVS G ++D V + G+WYSYG++++GQG
Sbjct: 242 TRVKVVKNKVAPPFKQADFEILYGEGVSFYGELVDLGVAFGFVQKSGSWYSYGNEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
+D A Q+L+DNP E+EK +R
Sbjct: 302 KDNAKQFLKDNPDKAAELEKAIR 324
>gi|393725026|ref|ZP_10344953.1| recombinase A [Sphingomonas sp. PAMC 26605]
Length = 358
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R +AL+AA+ I+ +FGKGS +LGS VE +G L LD+ALG GGLP+GR++EI
Sbjct: 15 ERAKALEAALAQIDRAFGKGSAMKLGSKQTMQVEVISTGSLGLDIALGVGGLPRGRVIEI 74
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH IAE QK GG A VDAEHA DP Y+K LGV+++ LIV QPD GE
Sbjct: 75 YGPESSGKTTLALHVIAEAQKTGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPDTGEQ 134
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ S+
Sbjct: 135 ALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISR 194
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK DE +G
Sbjct: 195 SRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDR--DEIIGNTT 252
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQ EF+I++G+GVSK+G +LD +V + GAW+SY R+GQGR
Sbjct: 253 RVKVVKNKVAPPFKQVEFDIMYGQGVSKIGEILDLGVKAGLVEKSGAWFSYDSVRIGQGR 312
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ + +L+++P + + +E +R+
Sbjct: 313 ENSKTFLKEHPEMSDRLEASIRA 335
>gi|339009469|ref|ZP_08642041.1| protein RecA [Brevibacillus laterosporus LMG 15441]
gi|421872705|ref|ZP_16304322.1| protein RecA [Brevibacillus laterosporus GI-9]
gi|338773947|gb|EGP33478.1| protein RecA [Brevibacillus laterosporus LMG 15441]
gi|372458120|emb|CCF13871.1| protein RecA [Brevibacillus laterosporus GI-9]
Length = 352
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/348 (52%), Positives = 256/348 (73%), Gaps = 8/348 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL++A+ I FGKGS+ ++G + V T +G L LD+ALG GG P+GRI+EI
Sbjct: 3 DRRAALESALRQIEKQFGKGSIMKMGEMAHSQVSTVSTGALALDIALGVGGFPRGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y+ LGV++E L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPVYAAKLGVNIEELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF+ASVRL++R IK +G++ VG +
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRKAEGIK--QGNDIVGTKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+SK G +LD +DIV + GAWY++ ++RLGQGR
Sbjct: 241 KIKVVKNKVAPPFKVAEVDIMYGEGISKEGSILDIGAELDIVAKSGAWYAFNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS--DGSVHQGSFLRNVSLPNQEE 434
+ A Q+L++NP + +I++ +R S S+ +G + + P Q+E
Sbjct: 301 ENAKQFLKENPAIAAQIDQKIREYYSLNPNSIPEGEAVLD---PEQDE 345
>gi|289208783|ref|YP_003460849.1| recA protein [Thioalkalivibrio sp. K90mix]
gi|288944414|gb|ADC72113.1| recA protein [Thioalkalivibrio sp. K90mix]
Length = 348
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 247/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R++AL AA+ I FGKG+V R+G V +G L LD+ALG GG+P+GR+VEI
Sbjct: 4 NRKKALTAALGQIERQFGKGAVMRMGDQQAVDVPAISTGSLALDIALGIGGVPRGRVVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L +AE QKLGG A VDAEHA DP+Y++ LGV+V++L+V QPD GE
Sbjct: 64 YGPESSGKTTLTLQVVAEAQKLGGTAAFVDAEHALDPTYAEKLGVNVDDLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++ N +
Sbjct: 124 ALEIADMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIGV +G+PE T+GG ALKF++SVR++IR G IK KGDE +G
Sbjct: 184 SNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRMDIRRIGAIK--KGDEVIGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+++A FEI++GEG+S++G +++ ++ + GAWYSY +R+GQG+
Sbjct: 242 RVKVVKNKMAPPFREAYFEILYGEGISRVGEIIEMGVKEGLIDKAGAWYSYNGERIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ A QYL+DNP + EE+EK +R +
Sbjct: 302 ENARQYLKDNPQIAEEVEKTLRERL 326
>gi|384085451|ref|ZP_09996626.1| recA protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 345
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 242/323 (74%), Gaps = 4/323 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
R +AL AA++ I+ FGKG+V RLG + + +G L LDLALG GGLP+GR+VEI
Sbjct: 5 RSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIAVYSTGSLGLDLALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHAIA Q+ GG A +DAEHA DP Y+ LGVD+ENL+V QPD GE
Sbjct: 65 YGPESSGKTTLTLHAIASCQQAGGTAAFIDAEHALDPGYAHKLGVDLENLLVSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+DLI VDSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N S+
Sbjct: 125 ALEIADMLVRSGAVDLIVVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANISR 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 185 TNTLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--KGDEVMGNDT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF I +GEG+S+L ++D +IV + GAWYSY +R+GQG+
Sbjct: 243 RVKVVKNKVAPPFREAEFAIYYGEGISRLSELVDLGVKFEIVEKSGAWYSYQGERIGQGK 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
D A QYL+++ L IE+ VR+
Sbjct: 303 DNARQYLKEHQELATRIEQQVRA 325
>gi|212639361|ref|YP_002315881.1| recombinase A [Anoxybacillus flavithermus WK1]
gi|212560841|gb|ACJ33896.1| RecA/RadA recombinase (multifunctional SOS repair regulator)
[Anoxybacillus flavithermus WK1]
Length = 391
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/333 (54%), Positives = 247/333 (74%), Gaps = 3/333 (0%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
F G DRQ AL+ A+ I FGKGS+ +LG + T SG L LD+ALG
Sbjct: 38 FCKYKGGVSLNDRQAALEQALKQIEKQFGKGSIMKLGEQTDRQISTVSSGSLALDIALGV 97
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG P+GRI+EI+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ LGV+++
Sbjct: 98 GGYPRGRIIEIYGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPVYAEKLGVNIDE 157
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
L++ QPD GE ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQ
Sbjct: 158 LLLSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQ 217
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRK+SG +K+ IF+NQIR K+GV +GNPE T GG ALKF+ASVRLE+R +IK
Sbjct: 218 ALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYASVRLEVRRAEQIK- 276
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
+G++ VG + +++V K+KV+ P+K A+ +I++GEG+SK G ++D +DI+ + GAWY
Sbjct: 277 -QGNDMVGNKTKIKVVKNKVAPPFKTADVDIMYGEGISKEGEIIDMGAELDIIQKSGAWY 335
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
SY D+RLGQGR+ A Q+L++NP + EEI + +R
Sbjct: 336 SYKDERLGQGRENAKQFLKENPHIMEEIAREIR 368
>gi|255287396|emb|CAQ58037.2| recombinase A [Agrobacterium tumefaciens]
Length = 320
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+++L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPDTANEIE 320
>gi|291288669|ref|YP_003505485.1| recA protein [Denitrovibrio acetiphilus DSM 12809]
gi|290885829|gb|ADD69529.1| recA protein [Denitrovibrio acetiphilus DSM 12809]
Length = 342
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 251/346 (72%), Gaps = 11/346 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+Q+ALDAAM I FGKG+V RLG + PSG L+LD+ALG GG P+GRI+EI
Sbjct: 4 DKQKALDAAMGKIEKDFGKGAVMRLGDKPVEKLPVIPSGILSLDIALGVGGFPRGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+G ESSGKTT+ALHAIAE QKLGG A VDAEHA DP Y+KA+GVD +NLIV QPD+GE+
Sbjct: 64 YGAESSGKTTIALHAIAEAQKLGGAAAFVDAEHALDPIYAKAIGVDTDNLIVSQPDSGEV 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID+I VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++ +K
Sbjct: 124 ALEITETLVRSGAIDIIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLTSIVNK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ TL+F+NQ R KIGV YGNPE T+GG ALKF+AS+RLEI+ T +K + +E VG
Sbjct: 184 SKTTLVFINQTRSKIGVVYGNPETTTGGNALKFYASMRLEIKKTQALK--EKEEVVGNHG 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V K+KV+ P+K AEF+I++G GVS+ G ++D V + GAW+SY D +LGQG+
Sbjct: 242 LAKVVKNKVAPPFKTAEFDILYGVGVSREGLLIDMGVDAGFVNKAGAWFSYNDAKLGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
+ + YL++NP + +EIE +R+ + + + LP ++E
Sbjct: 302 ENSRTYLKENPEIAQEIEDKIRTKL--------GMIEPIILPPEDE 339
>gi|296393357|ref|YP_003658241.1| recA protein [Segniliparus rotundus DSM 44985]
gi|296180504|gb|ADG97410.1| recA protein [Segniliparus rotundus DSM 44985]
Length = 346
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/333 (55%), Positives = 249/333 (74%), Gaps = 5/333 (1%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGR 144
++ LDR +AL+ A++ I+ SFGKGSV RLG + P+G + LD+ALG GGLPKGR
Sbjct: 2 AQALDRNKALELALSQIDKSFGKGSVMRLGDQASQPIAVIPTGSIALDVALGIGGLPKGR 61
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
++EI+GPESSGKTT+ALHA+A Q GG A +DAEHA DP Y+K LGVD ENL+V QPD
Sbjct: 62 VIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTENLLVSQPD 121
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G
Sbjct: 122 TGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTG 181
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDED 323
+ +G T IF+NQ+R KIGV +G E T+GG ALKF+ASVRL++R +I+++K G E
Sbjct: 182 ALNNSGTTAIFINQLREKIGVMFGPTETTTGGKALKFYASVRLDVR---RIETLKDGTEA 238
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
V R RV++ K+KV+ P+KQAEF+II+G G+S+ G ++D ++ + GAWY+YGD++
Sbjct: 239 VANRTRVKIVKNKVAPPFKQAEFDIIYGAGISREGSIIDLGVEHGLIRKSGAWYTYGDEQ 298
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
LGQG++ A ++L NP EEIE ++R + G
Sbjct: 299 LGQGKENARKFLIANPDKAEEIEMLLRDKLQIG 331
>gi|268317727|ref|YP_003291446.1| recA protein [Rhodothermus marinus DSM 4252]
gi|262335261|gb|ACY49058.1| recA protein [Rhodothermus marinus DSM 4252]
Length = 347
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/324 (55%), Positives = 246/324 (75%), Gaps = 3/324 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL+ A+ I +GKG++ RLG A V+ P+G L LD ALG GG+P+GRIVEI+
Sbjct: 8 KAKALELAVKHIEKQYGKGAIMRLGDAPAISVDVIPTGSLALDAALGVGGVPRGRIVEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +AE QKLGG +DAEHAFD Y+ LGVD++NL+V QPD GE A
Sbjct: 68 GPESSGKTTLALHIMAEAQKLGGACAFIDAEHAFDARYAANLGVDLDNLLVAQPDTGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
L I D + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQALRK++G ++
Sbjct: 128 LNICDTLVRSGALDVIVVDSVAALVPQAEIQGDMGDSHVGLQARLMSQALRKLTGTINRT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
LIF+NQ+R KIGV YGNPE T+GG+ALKF+ASVR++IR G IK +G E VG R +
Sbjct: 188 RTVLIFINQLRQKIGVMYGNPETTTGGLALKFYASVRMDIRRIGAIK--EGSEVVGNRTK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P+++AEF+II+GEG+S LG ++D A +I+ + G+WY+YG++R+GQGR+
Sbjct: 246 VKIVKNKVAPPFREAEFDIIYGEGISVLGELVDLAVEYNIIQKSGSWYAYGEERIGQGRE 305
Query: 390 KALQYLRDNPLLQEEIEKVVRSMM 413
A +LR+ P LQEEI + V+ M
Sbjct: 306 AAKAWLRERPELQEEIRRQVKEAM 329
>gi|414161981|ref|ZP_11418228.1| protein recA [Afipia felis ATCC 53690]
gi|410879761|gb|EKS27601.1| protein recA [Afipia felis ATCC 53690]
Length = 360
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV RLG A ++ +E SG L LD+ALG GGLPKGR+V
Sbjct: 14 MDKTKALTAALSQIERQFGKGSVMRLGKADRSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV+V+ L++ QPD+G
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ VDSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR TG IK + DE +G
Sbjct: 194 NKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRTGAIK--ERDEVIGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
RV+V K+K++ P+KQ EF+I++GEG+SK+G +LD IV + GAW+SY QRLGQ
Sbjct: 252 STRVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ + +LRDNP + +IE +R
Sbjct: 312 GRENSKAFLRDNPDMTAKIEAAIR 335
>gi|254489873|ref|ZP_05103068.1| protein RecA [Methylophaga thiooxidans DMS010]
gi|224464958|gb|EEF81212.1| protein RecA [Methylophaga thiooxydans DMS010]
Length = 347
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 245/326 (75%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I FGKG+V R+G AG A + +G + LD+ALG GGLP+GR++E
Sbjct: 4 NKKKALGAALGQIEKQFGKGAVMRMGDAGAARDIAAVSTGSIGLDVALGIGGLPRGRVIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LHAIAE+QK+GG A VDAEHA DP Y++ LGVD+++L+V QPD GE
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPVYAEKLGVDIDDLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N
Sbjct: 124 QALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 184 RSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--KGDEILGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+S+ G ++D ++V + GAWYSY R+GQG
Sbjct: 242 TRVKVVKNKVAPPFKQVEFDILYGEGISREGELIDLGVSQNLVEKSGAWYSYNGTRIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+D +LR+N + EIE +R M
Sbjct: 302 KDNVRAFLRENTEMAAEIEAKIREAM 327
>gi|354581498|ref|ZP_09000402.1| recA protein [Paenibacillus lactis 154]
gi|353201826|gb|EHB67279.1| recA protein [Paenibacillus lactis 154]
Length = 353
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/323 (55%), Positives = 248/323 (76%), Gaps = 5/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VE PSG L LD+ALG GGLP+GRI+E+
Sbjct: 3 DRRAALEMALRQIEKQFGKGSIMKLGESTHMQVEIVPSGSLALDIALGTGGLPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKTGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +++S+K G++ VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RVESIKMGNDVVGNR 239
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAE +I++GEG+S+ G ++D +DIV + GAWYS+G RLGQG
Sbjct: 240 TRIKVVKNKVAPPFKQAELDIMYGEGISREGSLIDIGTELDIVDKSGAWYSFGGDRLGQG 299
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+L+++P + IE +R
Sbjct: 300 RENAKQFLKEHPEVANVIENKIR 322
>gi|319784063|ref|YP_004143539.1| recA protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169951|gb|ADV13489.1| recA protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 365
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 247/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +ALDAA++ I +FGKGS+ RLG+ + +ET P+G L LD+ALG GGLP+
Sbjct: 10 EDKAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + S++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K DE
Sbjct: 190 TASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDR--DE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+K EF+I++GEGVSK G ++D +V + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPDTAREIELALR 335
>gi|345302567|ref|YP_004824469.1| protein recA [Rhodothermus marinus SG0.5JP17-172]
gi|345111800|gb|AEN72632.1| Protein recA [Rhodothermus marinus SG0.5JP17-172]
Length = 347
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/324 (55%), Positives = 246/324 (75%), Gaps = 3/324 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL+ A+ I +GKG++ RLG A V+ P+G L LD ALG GG+P+GRIVEI+
Sbjct: 8 KAKALELAVKHIEKQYGKGAIMRLGDAPAISVDVIPTGSLALDAALGVGGVPRGRIVEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +AE QKLGG +DAEHAFD Y+ LGVD++NL+V QPD GE A
Sbjct: 68 GPESSGKTTLALHIMAEAQKLGGACAFIDAEHAFDARYAANLGVDLDNLLVAQPDTGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
L I D + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQALRK++G ++
Sbjct: 128 LNICDTLVRSGALDVIVVDSVAALVPQAEIQGDMGDSHVGLQARLMSQALRKLTGTINRT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
LIF+NQ+R KIGV YGNPE T+GG+ALKF+ASVR++IR G IK +G E VG R +
Sbjct: 188 RTVLIFINQLRQKIGVMYGNPETTTGGLALKFYASVRMDIRRIGAIK--EGSEVVGNRTK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P+++AEF+II+GEG+S LG ++D A +I+ + G+WY+YG++R+GQGR+
Sbjct: 246 VKIVKNKVAPPFREAEFDIIYGEGISVLGELVDLAVEYNIIQKSGSWYAYGEERIGQGRE 305
Query: 390 KALQYLRDNPLLQEEIEKVVRSMM 413
A +LR+ P LQEEI + V+ M
Sbjct: 306 AAKAWLRERPELQEEIRRQVKEAM 329
>gi|310827659|ref|YP_003960016.1| recA protein [Eubacterium limosum KIST612]
gi|308739393|gb|ADO37053.1| recA protein [Eubacterium limosum KIST612]
Length = 386
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 247/322 (76%), Gaps = 4/322 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
+Q AL+AA+ +I +FGKG+V RLG + V+ + + +D+ALG GG+P+GRI+EI
Sbjct: 20 KQEALNAALKNIEKTFGKGAVMRLGDESAKMDVDVISTSSIGIDMALGIGGVPRGRIIEI 79
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QK GGNA +DAEHA DP Y+KALGVDV+NLIV QPD GE
Sbjct: 80 YGPESSGKTTIALHIVAEAQKAGGNAAFIDAEHALDPVYAKALGVDVDNLIVSQPDTGEQ 139
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID+ VDSV+AL PRAEI+GE+G +GLQARLMSQALRK++G K
Sbjct: 140 ALEILEALVRSGAIDVAVVDSVAALVPRAEIDGEMGDSHVGLQARLMSQALRKLAGIIKK 199
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV YGNPEVT+GG ALKF++SVR++IR +K KG + +G R
Sbjct: 200 SNTAAIFINQLREKVGVMYGNPEVTTGGRALKFYSSVRMDIRRIETLK--KGTDMIGNRT 257
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R ++ K+K++ P+K AEF+I++GEG+S+ G +LD A ++I+ + G+W+SYG++RLGQGR
Sbjct: 258 RAKIVKNKMAPPFKTAEFDIMYGEGISREGDILDMAVELNIIKKSGSWFSYGEERLGQGR 317
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
DK +YL++NP + +E+ +R
Sbjct: 318 DKVKEYLKENPEFADAVEQKIR 339
>gi|429244770|ref|ZP_19208196.1| recombinase A [Clostridium botulinum CFSAN001628]
gi|428758209|gb|EKX80655.1| recombinase A [Clostridium botulinum CFSAN001628]
Length = 352
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/347 (52%), Positives = 257/347 (74%), Gaps = 7/347 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A++AAM I FGKGS+ +LG VE+ +G L LD+ALG GG+P+GRI+EI
Sbjct: 8 EKLKAIEAAMGQIEKQFGKGSIMKLGEDSILNVESISTGSLDLDIALGIGGVPRGRIIEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK+GG A +DAEHA DP+Y++ LGVD++NLIV QPD GE
Sbjct: 68 FGPESSGKTTVALHILAEAQKIGGAAAFIDAEHALDPAYARNLGVDIDNLIVSQPDTGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 128 ALEITEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGSINK 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK +GD+ +G R
Sbjct: 188 SKCVAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIDSIK--QGDQILGNRT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+K AEF+I++ EG+SK+G +LD ++V + G+W+SY D RLGQGR
Sbjct: 246 RVKINKNKVAPPFKMAEFDIMYNEGISKVGNILDVGVREELVDKSGSWFSYKDTRLGQGR 305
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ A Q+L+DN + EIE +R V +N+++ N++E+
Sbjct: 306 ENAKQFLKDNMNIALEIENTIRKKHDLPVVDA----KNLNIENKKED 348
>gi|395493566|ref|ZP_10425145.1| recombinase A [Sphingomonas sp. PAMC 26617]
gi|404253892|ref|ZP_10957860.1| recombinase A [Sphingomonas sp. PAMC 26621]
Length = 359
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R +AL+AA+ I+ +FGKGS +LGS VE +G L LD+ALG GGLP+GR++EI
Sbjct: 15 ERAKALEAALAQIDRAFGKGSAMKLGSKQTMQVEVISTGSLGLDIALGVGGLPRGRVIEI 74
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH IAE QK GG A VDAEHA DP Y+K LGV+++ LIV QPD GE
Sbjct: 75 YGPESSGKTTLALHVIAEAQKGGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPDTGEQ 134
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RS AID++ VDSV+AL PRAEIEGE+G +GLQARLMSQ+LRK++G+ S+
Sbjct: 135 ALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISR 194
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR TG+IK +E +G
Sbjct: 195 SRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKD--REEIIGNTT 252
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQ EF+I++G+GVSK+G +LD +V + GAW+SY R+GQGR
Sbjct: 253 RVKVVKNKVAPPFKQVEFDIMYGQGVSKIGEILDLGVKAGLVEKSGAWFSYDSVRIGQGR 312
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A +L++N + + +EK +R+
Sbjct: 313 ENAKTFLKNNVEMSDRLEKAIRT 335
>gi|13470353|ref|NP_101919.1| recombinase A [Mesorhizobium loti MAFF303099]
gi|20178054|sp|Q98NQ6.1|RECA_RHILO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|14021092|dbj|BAB47705.1| recombination protein; RecA [Mesorhizobium loti MAFF303099]
Length = 365
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 247/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +ALDAA++ I +FGKGS+ RLG+ + +ET P+G L LD+ALG GGLP+
Sbjct: 10 EDKAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + S++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K DE
Sbjct: 190 TASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDR--DE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+K EF+I++GEGVSK G ++D +V + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPDTAREIELALR 335
>gi|331085030|ref|ZP_08334117.1| recA [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330408730|gb|EGG88195.1| recA [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 347
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ + FGKG+V +LG A + VET P+G L+LD+ALG GG+PKGRI+E
Sbjct: 5 DKLKALDAAIAKLEKDFGKGAVMKLGDAAANVSVETVPTGSLSLDIALGLGGVPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAEVQK GG A +DAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 65 IYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDELYISQPDSGD 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D+I VDSV+AL PR EIEG++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAMDIIVVDSVAALVPRQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+AS+R+++R T +K +G E VG R
Sbjct: 185 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASIRMDVRRTETLK--QGGEMVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+K++ P+K+AEF+I+FG+G+SK G +LD A +DI+ + GAWY+Y ++GQG
Sbjct: 243 TRIKVVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAAGLDIINKSGAWYAYNGDKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL +P + EEIE VR+
Sbjct: 303 RENAKTYLSTHPEVMEEIETKVRA 326
>gi|390954084|ref|YP_006417842.1| protein RecA [Aequorivita sublithincola DSM 14238]
gi|390420070|gb|AFL80827.1| protein RecA [Aequorivita sublithincola DSM 14238]
Length = 335
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 249/325 (76%), Gaps = 2/325 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G A VE P+G L LD+ALG GG P+GR++EI+
Sbjct: 8 KLKALKLTLDKLDKTYGKGTVMKMGDAAVEDVEVIPTGSLGLDVALGVGGYPRGRVIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHA+AE QK GG A +DAEHAFD Y++ LGVDVENLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAMAEAQKKGGIAAFIDAEHAFDRGYAEKLGVDVENLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G+ SK
Sbjct: 128 LEIADNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGSISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK + +G + R
Sbjct: 188 KCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDSDSNA-MGNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P+KQ EF+I++GEG+SK+G ++D +I+ + G+W+SY + +LGQGRD
Sbjct: 247 VKVVKNKVAPPFKQVEFDIMYGEGISKVGEIIDLGVDFEIIKKAGSWFSYDETKLGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMS 414
L DNP L +E+EK ++ ++
Sbjct: 307 AVKNLLLDNPELMDELEKKIKDAIA 331
>gi|337269281|ref|YP_004613336.1| recA protein [Mesorhizobium opportunistum WSM2075]
gi|433775682|ref|YP_007306149.1| protein RecA [Mesorhizobium australicum WSM2073]
gi|336029591|gb|AEH89242.1| recA protein [Mesorhizobium opportunistum WSM2075]
gi|433667697|gb|AGB46773.1| protein RecA [Mesorhizobium australicum WSM2073]
Length = 366
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 247/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +ALDAA++ I +FGKGS+ RLG+ + +ET P+G L LD+ALG GGLP+
Sbjct: 10 EDKAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + S++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K DE
Sbjct: 190 TASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDR--DE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+K EF+I++GEGVSK G ++D +V + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPDTAREIELALR 335
>gi|251797369|ref|YP_003012100.1| recA protein [Paenibacillus sp. JDR-2]
gi|247544995|gb|ACT02014.1| recA protein [Paenibacillus sp. JDR-2]
Length = 351
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VET PSG + LD+ALG GGLP+GRI+E
Sbjct: 3 DRRAALEMALRQIEKQFGKGSIMKLGESTHMQVETVPSGSIALDIALGIGGLPRGRIIEC 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ++GG A +DAEHA DP Y+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQRIGGQAAFIDAEHALDPLYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK+ G SK
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLGGAISK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF++SVRLE+R IK +G++ VG R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLEVRRIETIK--QGNDMVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++GEG+S+ G ++D MDIV + GAW+SY RLGQGR
Sbjct: 241 RIKVVKNKVAPPFKQAEIDIMYGEGISREGSLVDIGVEMDIVQKSGAWFSYNGDRLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L+D+P + IEK +R
Sbjct: 301 ENAKQFLKDHPEVAAVIEKQIR 322
>gi|159900707|ref|YP_001546954.1| recombinase A [Herpetosiphon aurantiacus DSM 785]
gi|238687059|sp|A9AXA6.1|RECA_HERA2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|159893746|gb|ABX06826.1| recA protein [Herpetosiphon aurantiacus DSM 785]
Length = 358
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 251/324 (77%), Gaps = 6/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL AA++ I+ FGKG++ R+ S +E P+G + LDLALG GG+P+GR++EI
Sbjct: 6 EKEKALAAALSQIDRQFGKGAIMRM-SDQRLSIEAIPTGSIALDLALGVGGIPRGRVIEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL H +AE QK+GG A +DAEHAFDP Y+ GV+VE+L+V QPD GE
Sbjct: 65 YGPESSGKTTLTQHIVAETQKMGGVAAFIDAEHAFDPVYAANCGVNVEDLLVSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID+I VDSV+AL PRAEIEG++G +GLQARLMSQALRK+SG SK
Sbjct: 125 ALEICETLVRSGAIDVIVVDSVAALVPRAEIEGDMGDSHVGLQARLMSQALRKLSGAVSK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV-GVR 327
+ LIF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR K++S+K +DV G R
Sbjct: 185 SRTALIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIR---KVESIKQGQDVTGAR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++QAEF+I++ EG+S+ G ++D M+I+ + GAW+ GD RLGQG
Sbjct: 242 ARVKVVKNKVAPPFRQAEFDIMYNEGISREGNIVDVGVTMEILRKSGAWFYLGDDRLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A Q+L+DNP L +EIEK++R+
Sbjct: 302 RENAKQFLKDNPALADEIEKMIRA 325
>gi|160933139|ref|ZP_02080528.1| hypothetical protein CLOLEP_01982 [Clostridium leptum DSM 753]
gi|156868213|gb|EDO61585.1| RecA protein [Clostridium leptum DSM 753]
Length = 391
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/331 (56%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 82 DSG--DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-G 138
DSG ++ +D+ +AL+ A+ I FGKG+V RLG V+ P+G L+LDLALG G
Sbjct: 13 DSGGNETMAVDKSKALETALGQIEKQFGKGAVMRLGQNEAMHVDAIPTGSLSLDLALGIG 72
Query: 139 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENL 198
GLP+GRIVEI+GPESSGKTTLALH IAE QK GG A +D EHA DP Y++ALGVDV++L
Sbjct: 73 GLPRGRIVEIYGPESSGKTTLALHCIAEGQKSGGYAAFIDVEHALDPVYARALGVDVDSL 132
Query: 199 IVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 258
+V QPD GE ALEI + + RSGAID+I VDSV+AL PRAEIEGE+G +GLQARLMSQA
Sbjct: 133 LVSQPDTGEQALEITEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQA 192
Query: 259 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318
LRK++G SK+ C IF+NQ+R K+GV YGNPEVT GG ALKF++SVR++IR +K+
Sbjct: 193 LRKLAGAISKSNCVAIFINQLREKVGVMYGNPEVTPGGRALKFYSSVRIDIRRIETLKA- 251
Query: 319 KGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYS 378
G E +G R R +V K+K++ P+++AEF++++G G+S+ G +LD A +D+V + GAW+S
Sbjct: 252 -GGEMIGSRTRAKVVKNKIAPPFREAEFDVMYGRGISREGELLDLAVKLDVVQKSGAWFS 310
Query: 379 YGDQRLGQGRDKALQYLRDNPLLQEEIEKVV 409
+ +RLGQGRD +Y R +P +IEK V
Sbjct: 311 FNGERLGQGRDNVKEYFRSHPDFAAKIEKQV 341
>gi|415721004|ref|ZP_11468248.1| recombinase A [Gardnerella vaginalis 00703Bmash]
gi|415724612|ref|ZP_11469990.1| recombinase A [Gardnerella vaginalis 00703C2mash]
gi|388061265|gb|EIK83922.1| recombinase A [Gardnerella vaginalis 00703Bmash]
gi|388062408|gb|EIK85025.1| recombinase A [Gardnerella vaginalis 00703C2mash]
Length = 385
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/333 (54%), Positives = 248/333 (74%), Gaps = 6/333 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R R+ AL+ A+ ++ +GKGS RLG VE P+G L LD+ALG
Sbjct: 14 IDADKADPR---RKAALEMALANVEKQYGKGSAMRLGDKPLQDVEVIPTGSLALDMALGI 70
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++
Sbjct: 71 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDS 130
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 131 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 190
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF++SVR++IR IK+
Sbjct: 191 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYSSVRMDIRRVSTIKN 250
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
G+E VG R +V++ K+K++ P+K AEF++++GEG+S G ++D A D++ + G+W+
Sbjct: 251 --GEEAVGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMAVQCDVIKKSGSWF 308
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
+Y ++LGQGR+ Q+L+DNP + EEI V+
Sbjct: 309 TYEGEQLGQGRENVRQFLKDNPAITEEISDKVK 341
>gi|357029345|ref|ZP_09091343.1| recombinase A [Mesorhizobium amorphae CCNWGS0123]
gi|355535264|gb|EHH04553.1| recombinase A [Mesorhizobium amorphae CCNWGS0123]
Length = 353
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/353 (55%), Positives = 255/353 (72%), Gaps = 7/353 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG+ + +ET P+G L LD+ALG GGLP+GRIV
Sbjct: 1 MDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 121 EQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K DE VG
Sbjct: 181 SRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDR--DEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+K EF+I++GEGVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
GR+ A +LRDNP EIE +R + + FL N E++ EE
Sbjct: 299 GRENAKLFLRDNPDTAREIELALR---QNAGLIAEKFLENGGPERGEDDGFEE 348
>gi|315648061|ref|ZP_07901162.1| recA protein [Paenibacillus vortex V453]
gi|315276707|gb|EFU40050.1| recA protein [Paenibacillus vortex V453]
Length = 353
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 246/323 (76%), Gaps = 5/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VE PSG L LD+ALG GGLPKGRI+E+
Sbjct: 3 DRRAALEMALRQIEKQFGKGSIMKLGESTHMQVEIVPSGSLALDIALGTGGLPKGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DPSY+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKAGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK+SG +K
Sbjct: 123 GLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R +I+S+K G++ VG R
Sbjct: 183 SKTITIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVR---RIESIKMGNDVVGNR 239
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAE +I++GEG+S+ G ++D +DIV + GAWYSY RLGQG
Sbjct: 240 TRIKVVKNKVAPPFKQAELDIMYGEGISREGSLIDIGTELDIVDKSGAWYSYSGDRLGQG 299
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+L+++P + IE +R
Sbjct: 300 RENAKQFLKEHPEIASVIENKIR 322
>gi|418403219|ref|ZP_12976714.1| recombinase A [Sinorhizobium meliloti CCNWSX0020]
gi|359502831|gb|EHK75398.1| recombinase A [Sinorhizobium meliloti CCNWSX0020]
Length = 361
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LG+ + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ +DSV+AL PRAEIEGE+G G+QARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LR+NP L EIE +R
Sbjct: 308 RLGQGRENAKLFLRENPELLREIETALR 335
>gi|116252383|ref|YP_768221.1| recombinase A [Rhizobium leguminosarum bv. viciae 3841]
gi|424870873|ref|ZP_18294535.1| protein RecA [Rhizobium leguminosarum bv. viciae WSM1455]
gi|122988509|sp|Q1MFZ8.1|RECA_RHIL3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|115257031|emb|CAK08125.1| putative recombinase [Rhizobium leguminosarum bv. viciae 3841]
gi|393166574|gb|EJC66621.1| protein RecA [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 364
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLP+
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELSLR 335
>gi|159184959|ref|NP_354855.2| RecA protein [Agrobacterium fabrum str. C58]
gi|335036228|ref|ZP_08529555.1| recombinase A [Agrobacterium sp. ATCC 31749]
gi|417633|sp|P33156.1|RECA_AGRT5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|159140237|gb|AAK87640.2| RecA protein [Agrobacterium fabrum str. C58]
gi|333792119|gb|EGL63489.1| recombinase A [Agrobacterium sp. ATCC 31749]
Length = 363
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+++L++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ +DSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDTANEIELALR 335
>gi|207366280|emb|CAQ58035.1| recombinase A [Agrobacterium tumefaciens]
gi|207366286|emb|CAQ58038.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+++L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPDTANEIE 320
>gi|228992467|ref|ZP_04152395.1| hypothetical protein bpmyx0001_32080 [Bacillus pseudomycoides DSM
12442]
gi|228767288|gb|EEM15923.1| hypothetical protein bpmyx0001_32080 [Bacillus pseudomycoides DSM
12442]
Length = 341
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/340 (53%), Positives = 253/340 (74%), Gaps = 7/340 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ ALD A+ I FGKGS+ +LG + T PSG L LD+ALG GG P+GR++EI
Sbjct: 3 DRQAALDMALKQIEKQFGKGSIMKLGEQAERRISTIPSGSLALDVALGVGGYPRGRVIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHAIAEVQ+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 GLEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF+++VRLE+R ++K +G++ VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTVRLEVRRAEQLK--QGNDIVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++GEG+S+ G +LD A +DIV + GAWYSY ++RLGQGR
Sbjct: 241 KIKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIVQKSGAWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVHQGSFL 424
+ A Q+L++NP L++EI +R G++ +G+ L
Sbjct: 301 ENAKQFLKENPELRDEIAFFIREHHGIGEDSGNLEEGAIL 340
>gi|207366292|emb|CAQ58041.1| recombinase A [Agrobacterium tumefaciens]
gi|207366294|emb|CAQ58042.1| recombinase A [Agrobacterium tumefaciens]
gi|207366296|emb|CAQ58043.1| recombinase A [Agrobacterium tumefaciens]
gi|207366298|emb|CAQ58044.1| recombinase A [Agrobacterium tumefaciens]
gi|207366300|emb|CAQ58045.1| recombinase A [Agrobacterium tumefaciens]
gi|207366302|emb|CAQ58046.1| recombinase A [Agrobacterium tumefaciens]
gi|207366304|emb|CAQ58047.1| recombinase A [Agrobacterium tumefaciens]
gi|207366306|emb|CAQ58048.1| recombinase A [Agrobacterium tumefaciens]
gi|207366308|emb|CAQ58049.1| recombinase A [Agrobacterium tumefaciens]
gi|207366310|emb|CAQ58050.1| recombinase A [Agrobacterium tumefaciens]
gi|207366312|emb|CAQ58051.1| recombinase A [Agrobacterium tumefaciens]
gi|207366348|emb|CAQ58069.1| recombinase A [Agrobacterium tumefaciens]
gi|444436566|gb|AGE09651.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436574|gb|AGE09655.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436604|gb|AGE09670.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/320 (59%), Positives = 244/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIV
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIV 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPETANEIE 320
>gi|325661213|ref|ZP_08149840.1| recA [Lachnospiraceae bacterium 4_1_37FAA]
gi|325472720|gb|EGC75931.1| recA [Lachnospiraceae bacterium 4_1_37FAA]
Length = 347
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+ + FGKG+V +LG A + VET P+G L+LD+ALG GG+PKGRI+E
Sbjct: 5 DKLKALDAAIAKLEKDFGKGAVMKLGDAAANVSVETVPTGSLSLDIALGLGGVPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAEVQK GG A +DAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 65 IYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDELYISQPDSGD 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D+I VDSV+AL PR EIEG++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAMDIIVVDSVAALVPRQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+AS+R+++R T +K +G E VG R
Sbjct: 185 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASIRMDVRRTETLK--QGGEMVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+K++ P+K+AEF+I+FG+G+SK G +LD A +DI+ + GAWY+Y ++GQG
Sbjct: 243 TRIKVVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAAGLDIINKSGAWYAYNGDKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL +P + EEIE VR+
Sbjct: 303 RENAKTYLSTHPEVMEEIEAKVRA 326
>gi|225375593|ref|ZP_03752814.1| hypothetical protein ROSEINA2194_01218 [Roseburia inulinivorans DSM
16841]
gi|225212572|gb|EEG94926.1| hypothetical protein ROSEINA2194_01218 [Roseburia inulinivorans DSM
16841]
Length = 350
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 257/335 (76%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA++ I +GKGS+ +LG + VET P+G L+LD+ALG GGLPKGRI+E
Sbjct: 5 DKLKALDAAISQIEKQYGKGSIMKLGDNSAHMNVETIPTGSLSLDIALGLGGLPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHA+AEVQK GG A +DAEHA DP+Y+K +GV+++ L + QPD GE
Sbjct: 65 IYGPESSGKTTVALHAVAEVQKRGGIAGFIDAEHALDPAYAKNIGVNIDELYISQPDCGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF++SVR+++R +I+S+K E VG
Sbjct: 185 KSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRMDVR---RIESLKQAGEVVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV++ K+KV+ P+K+AEF+I+FG+G+SK G +LD A I+V+ GAWY+Y ++GQ
Sbjct: 242 RTRVKIVKNKVAPPFKEAEFDIMFGKGISKEGDILDLAADCGIIVKSGAWYAYNGDKIGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMS-DGSVHQ 420
GR+ A YLR+NPL+ EE+E VR DG+ +
Sbjct: 302 GRENAKTYLRENPLVCEEVEAKVREKFQLDGTAEE 336
>gi|444436564|gb|AGE09650.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436568|gb|AGE09652.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436570|gb|AGE09653.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436572|gb|AGE09654.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436576|gb|AGE09656.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436578|gb|AGE09657.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436580|gb|AGE09658.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436582|gb|AGE09659.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436584|gb|AGE09660.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436586|gb|AGE09661.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436588|gb|AGE09662.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436590|gb|AGE09663.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436592|gb|AGE09664.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436594|gb|AGE09665.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436596|gb|AGE09666.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436598|gb|AGE09667.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436600|gb|AGE09668.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436602|gb|AGE09669.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436606|gb|AGE09671.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436608|gb|AGE09672.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436610|gb|AGE09673.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436612|gb|AGE09674.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436614|gb|AGE09675.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/320 (59%), Positives = 244/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIV
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIV 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPETANEIE 320
>gi|339627937|ref|YP_004719580.1| recA protein [Sulfobacillus acidophilus TPY]
gi|379007570|ref|YP_005257021.1| protein recA [Sulfobacillus acidophilus DSM 10332]
gi|339285726|gb|AEJ39837.1| recA protein [Sulfobacillus acidophilus TPY]
gi|361053832|gb|AEW05349.1| Protein recA [Sulfobacillus acidophilus DSM 10332]
Length = 343
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 246/327 (75%), Gaps = 4/327 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GGLPKGRIV 146
+DR++ALD A+ I FGKGS+ RLG ++ P+GC+TLDLA+G GGLP+GR+V
Sbjct: 3 MDREKALDLALAQIEKQFGKGSIMRLGQESTRTAIDVIPTGCITLDLAMGVGGLPRGRVV 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+G ESSGKTT+ALHAIAE QK GG A +D EHA DP Y+ LGV++++L++ QPD G
Sbjct: 63 EIYGQESSGKTTIALHAIAEAQKGGGVAAFIDVEHALDPLYASKLGVNLDDLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 123 EQALEIAEALVRSGAVDIVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +F+NQ+R K+GV +GNPE T GG ALKF+AS+RLE+R +K +G+E VG
Sbjct: 183 SKSRTIAVFINQLREKVGVMFGNPETTPGGRALKFYASIRLEVRRVDSLK--QGNEVVGS 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P+KQAEF+I++GEG+S+ G +LD A + +V + GAWY+Y D RLGQ
Sbjct: 241 RTRVKVVKNKVAPPFKQAEFDILYGEGISREGSILDLAVDLGLVQKSGAWYAYQDTRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMM 413
GR+ ++L+ NP L E+E +R +
Sbjct: 301 GRENTREFLKTNPDLANELETRIRQQV 327
>gi|357053792|ref|ZP_09114884.1| RecA protein [Clostridium clostridioforme 2_1_49FAA]
gi|355385418|gb|EHG32470.1| RecA protein [Clostridium clostridioforme 2_1_49FAA]
Length = 378
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 251/324 (77%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I ++GKGSV +LG + + +ET P+G ++LD+ALG GG+PKGRIVE
Sbjct: 18 EKLKALDAALTQIEKAYGKGSVMKLGDSRANMNIETVPTGSISLDIALGLGGVPKGRIVE 77
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y++ +GVD++NL + QPDNGE
Sbjct: 78 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGE 137
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++ S
Sbjct: 138 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVIS 197
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVRL++R +K +G E G R
Sbjct: 198 KSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYASVRLDVRRIETLK--QGGEVTGNR 255
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VR++V K+K++ P+K+AEF+I+FG+G+SK G +LD A +I+ + GAW++Y ++GQG
Sbjct: 256 VRIKVVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAVKENIIEKSGAWFAYNGAKIGQG 315
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ + QYL DNP + E+E VR+
Sbjct: 316 RENSKQYLSDNPAICAEVEAKVRA 339
>gi|160937429|ref|ZP_02084790.1| hypothetical protein CLOBOL_02320 [Clostridium bolteae ATCC
BAA-613]
gi|158439498|gb|EDP17248.1| hypothetical protein CLOBOL_02320 [Clostridium bolteae ATCC
BAA-613]
Length = 388
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I ++GKGSV +LG + + +ET P+G ++LD+ALG GG+PKGRIVE
Sbjct: 28 EKLKALDAALTQIEKAYGKGSVMKLGDSRANMNIETVPTGSISLDIALGLGGVPKGRIVE 87
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y++ +GVD++NL + QPDNGE
Sbjct: 88 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGE 147
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++ S
Sbjct: 148 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVIS 207
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVRL++R +K +G E G R
Sbjct: 208 KSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYASVRLDVRRIETLK--QGGEVTGNR 265
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VRV+V K+K++ P+K+AEF+I+FG G+SK G +LD A +I+ + GAW++Y ++GQG
Sbjct: 266 VRVKVVKNKIAPPFKEAEFDIMFGRGISKEGDILDLAVKENIIEKSGAWFAYNGSKIGQG 325
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ + QYL DNP + E+E VR+
Sbjct: 326 RENSKQYLSDNPAVCAEVEAKVRA 349
>gi|403746505|ref|ZP_10955038.1| recA protein [Alicyclobacillus hesperidum URH17-3-68]
gi|403120836|gb|EJY55190.1| recA protein [Alicyclobacillus hesperidum URH17-3-68]
Length = 345
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/315 (56%), Positives = 244/315 (77%), Gaps = 4/315 (1%)
Query: 98 AMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSG 155
A+ I FGKGS+ RLG A ++ VET P+G + LD+ALG GGLP+GRI+EI+GPESSG
Sbjct: 2 ALKQIEKQFGKGSIMRLGEASASMNVETVPTGSIALDIALGVGGLPRGRIIEIYGPESSG 61
Query: 156 KTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADR 215
KTT+ALH +AEVQKLGG A +DAEHA DP Y++ LGV+++ L++ QPD GE ALEIA+
Sbjct: 62 KTTVALHTVAEVQKLGGQAAFIDAEHALDPVYAQKLGVNIDELLISQPDTGEQALEIAEA 121
Query: 216 MCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIF 275
+ RSGA+D+I VDSV+AL P+ E+EG++G +GLQARLMSQALRK++G SK+ IF
Sbjct: 122 LVRSGAVDVIVVDSVAALVPKNELEGDMGDSHVGLQARLMSQALRKLAGAISKSKTIAIF 181
Query: 276 LNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKS 335
+NQIR K+GV +GNPE T+GG ALKF+ASVRLE+R IK +G++ VG R R++V K+
Sbjct: 182 INQIREKVGVMFGNPETTTGGRALKFYASVRLEVRRAEAIK--QGNDVVGSRTRIKVVKN 239
Query: 336 KVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYL 395
KV+ P++QA+ +I+FGEG+S+ G ++D A +DI+ + GAWYSY ++RLGQGR+ A +L
Sbjct: 240 KVAPPFRQADVDIMFGEGISREGSLIDIATEIDIIQKSGAWYSYNEERLGQGRENAKLFL 299
Query: 396 RDNPLLQEEIEKVVR 410
+++P L +IE VR
Sbjct: 300 KEHPELAAQIETAVR 314
>gi|207366278|emb|CAQ58034.1| recombinase A [Agrobacterium tumefaciens]
gi|207366342|emb|CAQ58066.1| recombinase A [Agrobacterium tumefaciens]
gi|207366344|emb|CAQ58067.1| recombinase A [Agrobacterium tumefaciens]
gi|255287394|emb|CAQ58036.2| recombinase A [Agrobacterium tumefaciens]
gi|444299282|emb|CCP29590.1| recombinase A, partial [Agrobacterium genomosp. 7]
gi|444299290|emb|CCP29594.1| recombinase A, partial [Agrobacterium genomosp. 9]
Length = 323
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+++L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPDTANEIE 320
>gi|21224115|ref|NP_629894.1| recombinase A [Streptomyces coelicolor A3(2)]
gi|6225931|sp|O50487.1|RECA_STRCO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|2687334|emb|CAA15875.1| recombinase A [Streptomyces coelicolor A3(2)]
Length = 374
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/332 (55%), Positives = 247/332 (74%), Gaps = 6/332 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GG+P+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRTNEPIEVIPTGSTALDVALGVGGIPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVH 419
++ A +L+DNP L EIEK ++ + G VH
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKQKLGVG-VH 332
>gi|325265014|ref|ZP_08131741.1| protein RecA [Clostridium sp. D5]
gi|324029704|gb|EGB90992.1| protein RecA [Clostridium sp. D5]
Length = 370
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 253/324 (78%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+++AL+AA+ + FGKG+V +LG G + VET P+GCL+LDLALG GG+PKGR++E
Sbjct: 7 DKKKALEAAIAKLEKDFGKGTVMKLGEPGAHVAVETVPTGCLSLDLALGLGGVPKGRVIE 66
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH IAEVQK GG A VDAEHA DP Y+K++GVD++ L + QPD+G+
Sbjct: 67 VYGPESSGKTTVALHMIAEVQKRGGIAGFVDAEHALDPVYAKSIGVDIDELYISQPDSGD 126
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGAID+I +DSV+AL PR EIEG++G +GLQARLMSQALRK++ S
Sbjct: 127 QALEITETMVRSGAIDIIVIDSVAALVPRQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 186
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R +K + E VG R
Sbjct: 187 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASVRMDVRRIETLK--QSGEMVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R+++ K+K++ P+K+AEF+I+FG+G+SK G +LD A +D+V + GAWY+Y +++GQG
Sbjct: 245 TRIKIVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAAGIDVVKKSGAWYAYEGEKIGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL ++P + EE+++ VR+
Sbjct: 305 RENAKAYLTEHPEVMEELDRKVRA 328
>gi|269795614|ref|YP_003315069.1| protein RecA [Sanguibacter keddieii DSM 10542]
gi|269097799|gb|ACZ22235.1| protein RecA [Sanguibacter keddieii DSM 10542]
Length = 359
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 251/330 (76%), Gaps = 5/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+AA+ I+ +FGKGS+ RLG G A VE P+G + LD+ALG GGLP+GR+VE+
Sbjct: 6 DREKALEAALAQIDRNFGKGSIMRLGEDGRAPVEVIPTGSIALDIALGIGGLPRGRVVEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVASAQRNGGIAAFIDAEHALDPDYAKKLGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 126 ALEIADMLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSS 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G E VG R
Sbjct: 186 SGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDIR---RIETLKEGTEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D V + G+W++Y +LGQG
Sbjct: 243 TRVKVVKNKMAPPFKQAEFDILYGHGISREGGLIDMGVEHGFVRKSGSWFTYDGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++ A +L+DNP L E+EK ++ + G+
Sbjct: 303 KENARTFLKDNPDLANELEKRIKEKLGVGA 332
>gi|415886647|ref|ZP_11548427.1| recombinase A [Bacillus methanolicus MGA3]
gi|387587334|gb|EIJ79657.1| recombinase A [Bacillus methanolicus MGA3]
Length = 346
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ AL+ A+ I FGKGS+ +LG + T PSG L LD ALG GG P+GRI+EI
Sbjct: 3 DRQAALEMALKQIEKQFGKGSIMKLGEQTDRRISTVPSGSLALDAALGVGGYPRGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ LGG A +DAEHA DP Y++ LGVD++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQALGGQAAFIDAEHALDPIYAQKLGVDIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF++++RLE+R ++K +G++ VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTIRLEVRRAEQLK--QGNDMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++GEG+SK G ++D +DI+ + G+WYSY D+RLGQGR
Sbjct: 241 KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGSELDIIQKSGSWYSYNDERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL++N L+ EI++ +R
Sbjct: 301 ENAKQYLKENVELRNEIQQKIR 322
>gi|289550923|ref|YP_003471827.1| RecA protein [Staphylococcus lugdunensis HKU09-01]
gi|385784550|ref|YP_005760723.1| recombinase A [Staphylococcus lugdunensis N920143]
gi|418414222|ref|ZP_12987438.1| protein recA [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635626|ref|ZP_13197997.1| RecA protein [Staphylococcus lugdunensis VCU139]
gi|289180455|gb|ADC87700.1| RecA protein [Staphylococcus lugdunensis HKU09-01]
gi|339894806|emb|CCB54102.1| recombinase A [Staphylococcus lugdunensis N920143]
gi|374841655|gb|EHS05115.1| RecA protein [Staphylococcus lugdunensis VCU139]
gi|410877860|gb|EKS25752.1| protein recA [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 348
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/334 (55%), Positives = 250/334 (74%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V + +G +TLD ALG GG PKGRI+EI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSVSTGSVTLDNALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y+ ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKNGGIAAFIDAEHALDPEYAAALGVDIDNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G + VG R
Sbjct: 184 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQDIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+SK G ++D DIV + GAWYSY R+GQG+
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGQGISKEGELIDLGVEHDIVDKSGAWYSYNGDRMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS--DGSVHQ 420
+ YL++NP ++++I++ +R + DG V +
Sbjct: 302 ENVKTYLKENPEVRDDIDRKLREKLGIFDGDVEE 335
>gi|323339760|ref|ZP_08080030.1| recombination protein A [Lactobacillus ruminis ATCC 25644]
gi|335996356|ref|ZP_08562274.1| recombination protein A [Lactobacillus ruminis SPM0211]
gi|417973787|ref|ZP_12614623.1| recombinase A [Lactobacillus ruminis ATCC 25644]
gi|323092839|gb|EFZ35441.1| recombination protein A [Lactobacillus ruminis ATCC 25644]
gi|335352171|gb|EGM53661.1| recombination protein A [Lactobacillus ruminis SPM0211]
gi|346329817|gb|EGX98100.1| recombinase A [Lactobacillus ruminis ATCC 25644]
Length = 362
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 246/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I +FGKGS+ R+G + T P+G L+LD ALG GG P+GRIVEI
Sbjct: 4 DRKAALDNALKKIEKNFGKGSIMRMGDKADTRISTVPTGSLSLDEALGVGGFPRGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AEVQK GG A +DAE+A DP+Y++ALGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAVAEVQKRGGTAAYIDAENALDPAYAQALGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEI D + SGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 124 GLEICDALVSSGAIDIVVVDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLSGTINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPE T GG ALKF+++VRLE+R +IK G + +G RV
Sbjct: 184 TKTIALFINQIREKVGVMFGNPETTPGGRALKFYSTVRLEVRRAEQIKD--GSDIIGNRV 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+K AE +I++GEG+SK G ++D A +IV + G+W+SYG++R+GQGR
Sbjct: 242 RIKVVKNKVAPPFKTAEVDIMYGEGISKTGELIDMAVEKEIVKKSGSWFSYGEERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A +Y++++P + EE+ K VR+
Sbjct: 302 ENAKKYMKEHPDIMEEVTKKVRA 324
>gi|207366346|emb|CAQ58068.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 244/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPETANEIE 320
>gi|374605160|ref|ZP_09678099.1| recombinase A [Paenibacillus dendritiformis C454]
gi|374389222|gb|EHQ60605.1| recombinase A [Paenibacillus dendritiformis C454]
Length = 352
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VE PSG L LD+ALG GGLP+GRI+E+
Sbjct: 3 DRRAALEMALRQIEKQFGKGSIMKLGESNHMQVEIVPSGSLALDIALGIGGLPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE QK+GG A +DAEHA DP+Y+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEAQKVGGQAAFIDAEHALDPTYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAISK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF++++RL++R IK +G++ +G R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTIRLDVRRVETIK--QGNDMIGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQA+ +I++GEG+S+ G ++D MDI+ + GAWYSY +RLGQGR
Sbjct: 241 RIKVVKNKVAPPFKQADIDIMYGEGISREGSIVDIGTEMDIIQKSGAWYSYEGERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++N L IE VR
Sbjct: 301 ENAKQFLKENGELALTIENKVR 322
>gi|195970165|ref|NP_385905.2| recombinase A [Sinorhizobium meliloti 1021]
gi|334316434|ref|YP_004549053.1| protein recA [Sinorhizobium meliloti AK83]
gi|384529619|ref|YP_005713707.1| protein recA [Sinorhizobium meliloti BL225C]
gi|384536050|ref|YP_005720135.1| recombinase A [Sinorhizobium meliloti SM11]
gi|407720741|ref|YP_006840403.1| recombinase A [Sinorhizobium meliloti Rm41]
gi|433613582|ref|YP_007190380.1| protein RecA [Sinorhizobium meliloti GR4]
gi|187904183|emb|CAC46378.2| DNA strand exchange and recombination protein [Sinorhizobium
meliloti 1021]
gi|333811795|gb|AEG04464.1| Protein recA [Sinorhizobium meliloti BL225C]
gi|334095428|gb|AEG53439.1| Protein recA [Sinorhizobium meliloti AK83]
gi|336032942|gb|AEH78874.1| recombinase A [Sinorhizobium meliloti SM11]
gi|407318973|emb|CCM67577.1| recombinase A [Sinorhizobium meliloti Rm41]
gi|429551772|gb|AGA06781.1| protein RecA [Sinorhizobium meliloti GR4]
Length = 361
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LG+ + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ +DSV+AL PRAEIEGE+G G+QARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LR+NP L EIE +R
Sbjct: 308 RLGQGRENAKLFLRENPELLREIETALR 335
>gi|347525259|ref|YP_004832007.1| recombinase A [Lactobacillus ruminis ATCC 27782]
gi|345284218|gb|AEN78071.1| Recombinase A [Lactobacillus ruminis ATCC 27782]
Length = 362
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 246/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I +FGKGS+ R+G + T P+G L+LD ALG GG P+GRIVEI
Sbjct: 4 DRKAALDNALKKIEKNFGKGSIMRMGDKADTRISTVPTGSLSLDEALGVGGFPRGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AEVQK GG A +DAE+A DP+Y++ALGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAVAEVQKRGGTAAYIDAENALDPAYAQALGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEI D + SGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 124 GLEICDALVSSGAIDIVVVDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLSGTINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPE T GG ALKF+++VRLE+R +IK G + +G RV
Sbjct: 184 TKTIALFINQIREKVGVMFGNPETTPGGRALKFYSTVRLEVRRAEQIKD--GSDIIGNRV 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+K AE +I++GEG+SK G ++D A +IV + G+W+SYG++R+GQGR
Sbjct: 242 RIKVVKNKVAPPFKTAEVDIMYGEGISKTGELIDMAVEKEIVKKSGSWFSYGEERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A +Y++++P + EE+ K VR+
Sbjct: 302 ENAKKYMKEHPDIMEEVTKKVRA 324
>gi|416157769|ref|ZP_11605292.1| recombinase A [Moraxella catarrhalis 101P30B1]
gi|416224493|ref|ZP_11626556.1| recombinase A [Moraxella catarrhalis 103P14B1]
gi|416235610|ref|ZP_11630241.1| recombinase A [Moraxella catarrhalis 12P80B1]
gi|416253822|ref|ZP_11638423.1| recombinase A [Moraxella catarrhalis O35E]
gi|326562574|gb|EGE12887.1| recombinase A [Moraxella catarrhalis 103P14B1]
gi|326564101|gb|EGE14341.1| recombinase A [Moraxella catarrhalis 12P80B1]
gi|326573518|gb|EGE23481.1| recombinase A [Moraxella catarrhalis 101P30B1]
gi|326577768|gb|EGE27641.1| recombinase A [Moraxella catarrhalis O35E]
Length = 349
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 245/325 (75%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I FGK ++ LG L V+ +G L LD+ALG GGLPKGRI+E
Sbjct: 4 NKEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTTL L IAE QK GG +DAEHA DP Y+K LGV++++L+V QPDNGE
Sbjct: 64 IFGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA
Sbjct: 124 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K GDE +G
Sbjct: 184 RSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKD--GDEIIGSE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+++LG ++D + V + GAWYSYGD ++GQG
Sbjct: 242 TRVKVIKNKMAPPFRQTEFQIMYGEGINRLGEVIDLGVDIGAVGKSGAWYSYGDGKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSM 412
+ ++YL++NP + EIE VR +
Sbjct: 302 KANTVKYLQENPAIASEIEAKVREI 326
>gi|295688601|ref|YP_003592294.1| recombination protein RecA [Caulobacter segnis ATCC 21756]
gi|295430504|gb|ADG09676.1| recA protein [Caulobacter segnis ATCC 21756]
Length = 356
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 253/322 (78%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+QRAL+AA+ I+ +FGKGSV +LG G +E+ +G L LD+ALG GGLPKGRI+E+
Sbjct: 16 DKQRALEAALAQIDRAFGKGSVMKLGEKGKVEMESVSTGSLGLDIALGIGGLPKGRIIEV 75
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH +AEVQK GG A VDAEHA DPSY+ LGV++++L+V QPDNGE
Sbjct: 76 YGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAHKLGVNLDSLLVSQPDNGEQ 135
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ +DSV+ALTP+AEIEGE+G GLQARLMSQALRK++ + +K
Sbjct: 136 ALEITDTLVRSGAVDIVVIDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTASINK 195
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
A +IF+NQIR+KIGV YG+PE T+GG ALKF+ASVRL+IR TG +K V+ DE +G V
Sbjct: 196 ANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGSVK-VR-DEIIGNNV 253
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++ EF+I++GEG+SKLG ++D I+ + G+W+SYG QR+GQGR
Sbjct: 254 RVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIEKAGSWFSYGSQRIGQGR 313
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
D ++L++NP + IE VR
Sbjct: 314 DNVREFLKNNPDIASSIEAAVR 335
>gi|159037027|ref|YP_001536280.1| recombinase A [Salinispora arenicola CNS-205]
gi|189039604|sp|A8M7V5.1|RECA_SALAI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157915862|gb|ABV97289.1| recA protein [Salinispora arenicola CNS-205]
Length = 348
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/320 (57%), Positives = 244/320 (76%), Gaps = 5/320 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+RALD A+ I+ FGKGSV RLG P+G + LD+ALG GGLP+GR++E+
Sbjct: 6 DRERALDLALAQIDKQFGKGSVMRLGERPVVQTAVVPTGSIALDVALGVGGLPRGRVIEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A VDAEHA DP Y++ALGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQRAGGIAAFVDAEHALDPEYARALGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+G S
Sbjct: 126 ALEIADMLVRSGALDIIIIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGVLSN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+S+K G + VG R
Sbjct: 186 TGTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDVR---RIESLKDGTDVVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAAPFKQAEFDIMYGKGISREGSLIDVGVEQAIIRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEK 407
++KA ++LR+NP + EIEK
Sbjct: 303 KEKAREFLRENPDVAAEIEK 322
>gi|395782692|ref|ZP_10463064.1| protein recA [Bartonella rattimassiliensis 15908]
gi|395416570|gb|EJF82940.1| protein recA [Bartonella rattimassiliensis 15908]
Length = 347
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALNAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDMIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + IV + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ Q+LR++ + EIE +R
Sbjct: 299 GRENVKQFLREHAEIATEIETALR 322
>gi|83858788|ref|ZP_00952310.1| recombinase A [Oceanicaulis sp. HTCC2633]
gi|83853611|gb|EAP91463.1| recombinase A [Oceanicaulis sp. HTCC2633]
Length = 360
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+Q+AL+AA+ I+ +FGKGSV +LG+ ++ +G L LD+ALG GGLPKGRIVE
Sbjct: 14 MDKQKALEAALTQIDRAFGKGSVMKLGAKPDQDIQAISTGSLGLDIALGVGGLPKGRIVE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH +AE QK GG A VDAEHA DP Y++ LGVDV L+V QPD GE
Sbjct: 74 IYGPESSGKTTLALHTVAECQKSGGTAAFVDAEHALDPVYARKLGVDVSELLVSQPDAGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ +DSV+ALTPRAE+EG++G GLQARLMSQALRK++ + S
Sbjct: 134 QALEIADTLVRSGAIDVLVIDSVAALTPRAELEGDMGDSLPGLQARLMSQALRKLTASIS 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK+ DE +G +
Sbjct: 194 KSKCLVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKNR--DEVIGNQ 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+++ EF+I++GEG+SK G +LD +I+ + G+WYS+ +R+GQG
Sbjct: 252 TRVKVVKNKVAPPFREVEFDILYGEGISKTGELLDLGVKGNIIEKSGSWYSHDSERIGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+L DNP + + IE VR
Sbjct: 312 RENARQFLLDNPEIADRIEAQVR 334
>gi|315658425|ref|ZP_07911297.1| recombination protein A [Staphylococcus lugdunensis M23590]
gi|315496754|gb|EFU85077.1| recombination protein A [Staphylococcus lugdunensis M23590]
Length = 367
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/334 (55%), Positives = 250/334 (74%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG G V + +G +TLD ALG GG PKGRI+EI
Sbjct: 23 DRQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSVSTGSVTLDNALGVGGYPKGRIIEI 82
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y+ ALGVD++NL + QPD+GE
Sbjct: 83 YGPESSGKTTVALHAIAEVQKNGGIAAFIDAEHALDPEYAAALGVDIDNLYLSQPDHGEQ 142
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 143 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 202
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G + VG R
Sbjct: 203 SNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQDIVGNRT 260
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+SK G ++D DIV + GAWYSY R+GQG+
Sbjct: 261 KIKVVKNKVAPPFKVAEVDIMYGQGISKEGELIDLGVEHDIVDKSGAWYSYNGDRMGQGK 320
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS--DGSVHQ 420
+ YL++NP ++++I++ +R + DG V +
Sbjct: 321 ENVKTYLKENPEVRDDIDRKLREKLGIFDGDVEE 354
>gi|329849340|ref|ZP_08264186.1| protein RecA [Asticcacaulis biprosthecum C19]
gi|328841251|gb|EGF90821.1| protein RecA [Asticcacaulis biprosthecum C19]
Length = 360
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/324 (59%), Positives = 255/324 (78%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++QRAL+AA+ I+ +FGKGSV RLG G A VE+ +G L LD+ALG GGLPKGR++E
Sbjct: 15 EKQRALEAALAQIDRAFGKGSVMRLGVGGKIAEVESISTGSLGLDIALGIGGLPKGRVIE 74
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH +AE+QK GG A VDAEHA DP+Y+ LGV++E L+V QPDNGE
Sbjct: 75 IYGPESSGKTTLALHTVAEIQKAGGTAAFVDAEHALDPTYAGKLGVNLEELLVSQPDNGE 134
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTPRAEIEG++G GLQARLMSQALRK++G+ S
Sbjct: 135 QALEITDTLVRSGAVDIVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTGSIS 194
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IRS GKIK V+ DE +G
Sbjct: 195 KSKCIVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRSIGKIK-VR-DEIIGNN 252
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
V+V+V K+KV+ P+++ EF+I++G+G+SKLG ++D I+ + G+W+SY R+GQG
Sbjct: 253 VKVKVVKNKVAPPFREVEFDILYGQGISKLGEIIDMGVKASIIEKAGSWFSYNSTRIGQG 312
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A +L+ NP + EIEK +R+
Sbjct: 313 RENARDFLKANPEMTAEIEKAIRN 336
>gi|108804260|ref|YP_644197.1| recA protein [Rubrobacter xylanophilus DSM 9941]
gi|123177369|sp|Q1AW43.1|RECA_RUBXD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|108765503|gb|ABG04385.1| RecA protein [Rubrobacter xylanophilus DSM 9941]
Length = 344
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 248/322 (77%), Gaps = 3/322 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
LD+ +ALD A++ I FGKGS+ R+G V + +G L LDLALG GG+P+GRIVE
Sbjct: 3 LDKSKALDTAVSQIERQFGKGSIMRMGDRASQKVASISTGSLALDLALGVGGVPRGRIVE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTTLALH IAE Q+ GG A +DAEHA DP+Y++A+GVD+ENL QPD+GE
Sbjct: 63 IFGPESSGKTTLALHIIAEAQRAGGLAAFIDAEHALDPTYAEAIGVDLENLYFSQPDSGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D + +DSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG+ S
Sbjct: 123 QALEIADTLVRSGALDAVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSLS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++G T IF+NQ+R KIGV +G+PE T GG ALKF+ASVR++IR G +K+ G+E VG +
Sbjct: 183 RSGTTAIFINQLREKIGVMFGSPETTPGGRALKFYASVRMDIRRIGALKA--GNETVGNQ 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P+K+ F+I++GEG+S+ G +LD ++ + GAW++YG++R+GQG
Sbjct: 241 TRVKIVKNKVAPPFKEVTFDIMYGEGISREGSLLDVGIEQGVIQKSGAWFAYGEERIGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
R+ A ++L+++P +++ I + V
Sbjct: 301 RENARKFLKEHPEIRDRITREV 322
>gi|332670081|ref|YP_004453089.1| recA protein [Cellulomonas fimi ATCC 484]
gi|332339119|gb|AEE45702.1| recA protein [Cellulomonas fimi ATCC 484]
Length = 346
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 249/329 (75%), Gaps = 3/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+AA++ I+ FGKGS+ RLG G VE P+G + LD+ALG GGLP+GRI+E+
Sbjct: 6 DREKALEAALSQIDRQFGKGSIMRLGDEGRPPVEVIPTGSIALDVALGIGGLPRGRIIEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 126 ALEIMDMLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALNA 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR +K +G + VG R
Sbjct: 186 SGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRMDIRRIETLK--EGTDAVGNRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+K++ P+KQAEF+I++G G+S+ G ++D V + GAWY+Y +LGQG+
Sbjct: 244 RVKIVKNKMAPPFKQAEFDILYGVGISREGSLIDLGVEHGFVRKSGAWYTYEGDQLGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ A ++LRDNP L +EI+K ++ + G+
Sbjct: 304 ENARKFLRDNPDLADEIDKKIKEKLGIGA 332
>gi|433603504|ref|YP_007035873.1| Protein RecA [Saccharothrix espanaensis DSM 44229]
gi|407881357|emb|CCH29000.1| Protein RecA [Saccharothrix espanaensis DSM 44229]
Length = 346
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 250/331 (75%), Gaps = 5/331 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+ A+ I+ FGKGSV RLG G A +E P+G + LD+ALG GGLP+GR+VEI
Sbjct: 6 DRDKALELALAQIDKQFGKGSVMRLGEDGRAPIEVIPTGAIALDVALGIGGLPRGRVVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y++ LGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQRNGGIAAFIDAEHALDPDYARKLGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 126 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDNHVGLQARLMSQALRKITGALSS 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 186 SGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGGEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDILYGLGISREGSLIDMGVDQAILRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
++ A ++LRDNP + EIEK ++ + G+
Sbjct: 303 KENARKFLRDNPDVANEIEKRIKDKLGIGAT 333
>gi|399042548|ref|ZP_10737258.1| protein RecA [Rhizobium sp. CF122]
gi|398058991|gb|EJL50859.1| protein RecA [Rhizobium sp. CF122]
Length = 362
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 IIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPDLLREIETALR 335
>gi|207366318|emb|CAQ58054.1| recombinase A [Agrobacterium tumefaciens]
gi|207366320|emb|CAQ58055.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/320 (59%), Positives = 244/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIV
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIV 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPDTANEIE 320
>gi|331269615|ref|YP_004396107.1| recA protein [Clostridium botulinum BKT015925]
gi|329126165|gb|AEB76110.1| recA protein [Clostridium botulinum BKT015925]
Length = 348
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 250/347 (72%), Gaps = 15/347 (4%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA+ I FGKGSV +LG +E +G L+LD+ALG GG+P+GRI+EI
Sbjct: 4 EKMKALQAALTQIEKQFGKGSVMKLGEEKVLNIEAISTGSLSLDIALGIGGIPRGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK GG A +DAEHA DP Y+KALGVD++NLIV QPD GE
Sbjct: 64 FGPESSGKTTVALHIVAEAQKAGGTAAFIDAEHALDPVYAKALGVDIDNLIVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 124 ALEICEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLTGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF+ASVRL++R IK +GD +G R
Sbjct: 184 SKCAAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRKIEIIK--QGDAFLGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++G G+S G +LD +I+ + G+W+SY D RLGQGR
Sbjct: 242 RVKVVKNKVAPPFKQAEFDIMYGSGISYEGNVLDVGVENEIIQKSGSWFSYKDTRLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ Q+L++NP + E+E +R+ N+ L N+ EN
Sbjct: 302 ENVKQFLKENPNILVEVENQIRAK------------HNLQLRNENEN 336
>gi|71361898|gb|AAZ30056.1| recombinant protein A [Moraxella catarrhalis O35E]
Length = 349
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 245/325 (75%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I FGK ++ LG L V+ +G L LD+ALG GGLPKGRI+E
Sbjct: 4 NKEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTTL L IAE QK GG +DAEHA DP Y+K LGV++++L+V QPDNGE
Sbjct: 64 IFGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA
Sbjct: 124 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K GDE +G
Sbjct: 184 RSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKD--GDEIIGSE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+++LG ++D + V + GAWYSYGD ++GQG
Sbjct: 242 TRVKVIKNKMAPPFRQTEFQIMYGEGINRLGEVIDLGVDIGAVGKSGAWYSYGDGKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSM 412
+ ++YL++NP + EIE VR +
Sbjct: 302 KANTVKYLQENPAIASEIEAKVREI 326
>gi|410667508|ref|YP_006919879.1| protein RecA [Thermacetogenium phaeum DSM 12270]
gi|409105255|gb|AFV11380.1| protein RecA [Thermacetogenium phaeum DSM 12270]
Length = 348
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/336 (54%), Positives = 254/336 (75%), Gaps = 7/336 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +AL+ A++ I +FG+GS+ RLG L V+ PSG L LDLALG GG+P+GRI+E
Sbjct: 3 DKLKALELALSHIEKAFGRGSIMRLGDTPAQLNVDVIPSGNLPLDLALGVGGIPRGRIIE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AE QK GG A +DAEHA DP Y++ALGVD++NL V QPD GE
Sbjct: 63 IYGPESSGKTTVALHVVAEAQKRGGMAAFIDAEHALDPVYAQALGVDIDNLYVSQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + + RSGA+D+I +DSV+AL PRAE+EGE+G +GLQARLMSQALRK++G S
Sbjct: 123 QALEITETLVRSGALDVIVIDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLTGTIS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K T IF+NQIR K+GV +GNPEVT+GG ALKF+ASVRLE++ IK +G + VG R
Sbjct: 183 KTKTTAIFINQIREKVGVMFGNPEVTTGGRALKFYASVRLEVKKIDLIK--QGTDIVGSR 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQ E ++++G+G+S+ G +LD I+ + G+W++YG++RLGQG
Sbjct: 241 TRIKVVKNKVAPPFKQVECDLMYGKGISREGGLLDLGLEFGIISKSGSWFAYGEERLGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSF 423
R+ A ++LR++P + +EIE+ +R + S+ QG F
Sbjct: 301 RENAKEFLREHPEIAQEIEQKIREVT---SIKQGIF 333
>gi|398353909|ref|YP_006399373.1| protein RecA [Sinorhizobium fredii USDA 257]
gi|390129235|gb|AFL52616.1| protein RecA [Sinorhizobium fredii USDA 257]
Length = 361
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSKDSVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR++EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+ENL++ Q
Sbjct: 70 GRVIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+AL PRAEIEGE+G G+QARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LR+NP L EIE +R
Sbjct: 308 RLGQGRENAKLFLRENPDLAREIEMSLR 335
>gi|415716524|ref|ZP_11466516.1| recombinase A [Gardnerella vaginalis 1400E]
gi|388057141|gb|EIK79974.1| recombinase A [Gardnerella vaginalis 1400E]
Length = 384
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/333 (53%), Positives = 248/333 (74%), Gaps = 6/333 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R R+ AL+ A+ ++ +GKGS RLG VE P+G + LD+ALG
Sbjct: 14 IDADKADPR---RKAALETALANVEKQYGKGSAMRLGDKPLQDVEVIPTGSIALDMALGI 70
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++
Sbjct: 71 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGIAAFIDAEHALDPVYARKLGVDTDS 130
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 131 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 190
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF++SVR++IR IK+
Sbjct: 191 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYSSVRMDIRRVSTIKN 250
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
G+E VG R +V++ K+K++ P+K AEF++++GEG+S G ++D A D++ + G+W+
Sbjct: 251 --GEEAVGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMAVQCDVIKKSGSWF 308
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
+Y ++LGQGR+ Q+L+DNP + EEI V+
Sbjct: 309 TYEGEQLGQGRENVRQFLKDNPAITEEISDKVK 341
>gi|386817726|ref|ZP_10104944.1| Protein recA [Thiothrix nivea DSM 5205]
gi|386422302|gb|EIJ36137.1| Protein recA [Thiothrix nivea DSM 5205]
Length = 347
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I FGKG+V R+G V+ +G LTLD+ALG GGLPKGR+VE
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDTNAIRDVDVISTGSLTLDIALGIGGLPKGRVVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L IAE QK GG A VDAEHA DP Y++ LGV+V++L+V QPD GE
Sbjct: 64 IYGPESSGKTTLTLQVIAECQKQGGTAAFVDAEHALDPIYAQKLGVNVDDLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++GN
Sbjct: 124 QALEIADMLVRSGAVDIVVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR G IK KGDE G
Sbjct: 184 RSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIK--KGDEITGSE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEFEI++GEG+S+ G ++D ++V + GAWYSY +++GQG
Sbjct: 242 TRVKVVKNKMAPPFKQAEFEILYGEGISREGELIDLGVKQELVGKAGAWYSYKGEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
+D A YL+++P + EIE+ +R+
Sbjct: 302 KDNARTYLKEHPEIAAEIEQAIRA 325
>gi|297626494|ref|YP_003688257.1| recombinase A [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922259|emb|CBL56831.1| RecA (Recombinase A) [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 372
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 247/323 (76%), Gaps = 5/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +ALDAA+ I + GKGSV RLG A +E+ P+G + LD+ALG GGLP+GRIVE+
Sbjct: 5 DRNKALDAALAQIEKAHGKGSVMRLGDQAYAQIESIPTGSVALDIALGIGGLPRGRIVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIA Q GG +DAEHA DPSY+ ALGV+ + L+V QPDNGE
Sbjct: 65 YGPESSGKTTVALHAIANAQAEGGICAFIDAEHALDPSYAHALGVNTDELLVSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA++L+ +DSV+ALTPRAEIEGE+G +GLQARLMSQALRKM+G
Sbjct: 125 ALEIADTLVRSGALELLVIDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKMTGAIKS 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
A T+IF+NQ+R KIGV +G+PE T+GG ALKF++SVRL++R +I+S+K G+E VG R
Sbjct: 185 ANTTVIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVR---RIESLKNGNEIVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D IV + GAW++YGD +LGQG
Sbjct: 242 TRVKVAKNKVAPPFKQAEFDILYGKGISREGSLIDMGVDAGIVRKAGAWFTYGDDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
++ A +L +P + +IE +R
Sbjct: 302 KENARTFLITHPEVASDIEHKIR 324
>gi|365867010|ref|ZP_09406600.1| recombinase A [Streptomyces sp. W007]
gi|364003541|gb|EHM24691.1| recombinase A [Streptomyces sp. W007]
Length = 381
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 244/322 (75%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 8 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QKLGG+ +DAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 68 YGPESSGKTTLTLHAVANAQKLGGSVAFIDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 128 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 188 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 245 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVDHGFVRKAGAWYTYEGDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +L+DNP L EIEK +
Sbjct: 305 KENARNFLKDNPDLANEIEKKI 326
>gi|110633616|ref|YP_673824.1| recombinase A [Chelativorans sp. BNC1]
gi|123058023|sp|Q11IW6.1|RECA_MESSB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|110284600|gb|ABG62659.1| RecA protein [Chelativorans sp. BNC1]
Length = 360
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG+ + +ET +G L LD+ALG GGLP+GRI+
Sbjct: 14 VDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D+I VDSV+ALTPRAEIEGE+G G+QARLMSQALRK++ +
Sbjct: 134 EQALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K +E VG
Sbjct: 194 SRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDR--EETVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKAGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LRDNP + EIE +R
Sbjct: 312 GRENAKLFLRDNPEVAREIELALR 335
>gi|424895240|ref|ZP_18318814.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393179467|gb|EJC79506.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 362
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLP+
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELSLR 335
>gi|163794127|ref|ZP_02188100.1| RecA protein [alpha proteobacterium BAL199]
gi|159180741|gb|EDP65260.1| RecA protein [alpha proteobacterium BAL199]
Length = 360
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I +FGKGSV +LG GA+ ++T +G + LD+ALG GGLP+GR+V
Sbjct: 13 MDKSKALEAALSQIERAFGKGSVMKLGQREGAVEIDTVSTGSIGLDIALGIGGLPRGRVV 72
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTL+LH +AE QK GG VDAEHA DP Y++ LGVDV+ L++ QPD G
Sbjct: 73 EIYGPESSGKTTLSLHVVAEAQKAGGTCAFVDAEHALDPIYARKLGVDVDELLISQPDTG 132
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G +GLQARLMSQALRK++G+
Sbjct: 133 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDTHVGLQARLMSQALRKLTGSI 192
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK DE VG
Sbjct: 193 SKSRCMVIFINQIRQKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKDR--DEVVGN 250
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P++ EF+I++GEGVSK+G +LD IV + GAW+S+G R+GQ
Sbjct: 251 QTRVKVVKNKLAPPFRVVEFDIMYGEGVSKMGELLDLGVNAGIVEKSGAWFSHGGNRIGQ 310
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR NP + + IE+ +R
Sbjct: 311 GRENAKTFLRQNPDVAQIIERKIR 334
>gi|163814166|ref|ZP_02205558.1| hypothetical protein COPEUT_00320 [Coprococcus eutactus ATCC 27759]
gi|158450615|gb|EDP27610.1| RecA protein [Coprococcus eutactus ATCC 27759]
Length = 354
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 250/326 (76%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+++ALDAA+ I +GKGSV +LG + + ++ P+G L+LD+ALG GG+P+GRI+E
Sbjct: 13 DKKKALDAAIAQIEKQYGKGSVMKLGDSNANMNIDVIPTGSLSLDIALGLGGIPRGRIIE 72
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
+FGPESSGKTT+ALH +AE+QK GG A +DAEHA DP+Y+K +GVD++NL + QPD GE
Sbjct: 73 VFGPESSGKTTVALHIVAEIQKRGGIAGFIDAEHALDPTYAKNIGVDIDNLYISQPDCGE 132
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GL ARLMSQALRK++ S
Sbjct: 133 QALEITETMVRSGAVDVVIVDSVAALVPKAEIDGEMGDSHMGLHARLMSQALRKLTAVVS 192
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K C +IF+NQ+R K+GV +GNPEVT+GG ALKF+ASVRL++R ++ +G E VG R
Sbjct: 193 KTNCVVIFINQLREKVGVVFGNPEVTTGGRALKFYASVRLDVRRIDTLR--QGGEIVGNR 250
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P+K+AEF+I+FG+G+SK+G +LD A DIV + GAWY+Y ++GQG
Sbjct: 251 TRVKIVKNKVAPPFKEAEFDIVFGKGISKVGDILDLAVANDIVDKSGAWYAYNGNKIGQG 310
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
R+ A YL +N + EIE+ VR ++
Sbjct: 311 RENAKMYLENNETICSEIEQKVREIL 336
>gi|167759044|ref|ZP_02431171.1| hypothetical protein CLOSCI_01391 [Clostridium scindens ATCC 35704]
gi|336421524|ref|ZP_08601681.1| recA [Lachnospiraceae bacterium 5_1_57FAA]
gi|167663451|gb|EDS07581.1| RecA protein [Clostridium scindens ATCC 35704]
gi|336000408|gb|EGN30558.1| recA [Lachnospiraceae bacterium 5_1_57FAA]
Length = 357
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
D++RALDAA+ + FGKG+V +LG A VET P+G L+LDLALG GG+PKGR+VE
Sbjct: 5 DKKRALDAAIAKLEKDFGKGTVMKLGDPAAQVAVETIPTGSLSLDLALGLGGVPKGRVVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH IAEVQK GG A +DAEHA DP+Y+K +GVD++ L + QPD+G+
Sbjct: 65 VYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPAYAKNIGVDIDELYISQPDSGD 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ M RSGA+D+I VDSV+AL PR EIEG++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEIAETMVRSGAMDIIVVDSVAALVPRQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+AS+R+++R +K + E VG R
Sbjct: 185 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASIRMDVRRIETLK--QSGEMVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+K++ P+K+AEF+I+FG+G+SK G +LD A +D+V + GAW++Y ++GQG
Sbjct: 243 TRVKIVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAVSIDLVNKSGAWFAYNGNKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A YL ++P + EE+EK +R
Sbjct: 303 RENAKSYLAEHPEVMEELEKKIR 325
>gi|227875221|ref|ZP_03993363.1| recombination protein A [Mobiluncus mulieris ATCC 35243]
gi|269978112|ref|ZP_06185062.1| protein RecA [Mobiluncus mulieris 28-1]
gi|306818483|ref|ZP_07452206.1| recombination protein A [Mobiluncus mulieris ATCC 35239]
gi|307700702|ref|ZP_07637727.1| RecA protein [Mobiluncus mulieris FB024-16]
gi|227844126|gb|EEJ54293.1| recombination protein A [Mobiluncus mulieris ATCC 35243]
gi|269933621|gb|EEZ90205.1| protein RecA [Mobiluncus mulieris 28-1]
gi|304648656|gb|EFM45958.1| recombination protein A [Mobiluncus mulieris ATCC 35239]
gi|307613697|gb|EFN92941.1| RecA protein [Mobiluncus mulieris FB024-16]
Length = 372
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 249/323 (77%), Gaps = 6/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
DR +AL+ A+ I+ FGKGSV RLG +A G + P+G + LD+ALG GGLP+GRIVE
Sbjct: 5 DRAKALETALGQIDKQFGKGSVMRLGDNAAGKDIAVIPTGSVALDVALGIGGLPRGRIVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ LGVD++NL+V QPD GE
Sbjct: 65 IYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYAQKLGVDIDNLLVSQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSG +D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK++G S
Sbjct: 125 QALEIADMLIRSGGLDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKITGALS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR+++R +I+++K G +G
Sbjct: 185 ATGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDVR---RIETMKDGTNPIGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R R ++ K+K++ P++QAEF+I++GEG+S+ G ++D DIV + G+W++YG+ +LGQ
Sbjct: 242 RTRAKIVKNKMAPPFRQAEFDIMYGEGISREGGLIDLGVDCDIVTKSGSWFTYGEIQLGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVV 409
G++ A ++LRDNP L E+E +
Sbjct: 302 GKENARKFLRDNPELAAELENKI 324
>gi|207366328|emb|CAQ58059.1| recombinase A [Agrobacterium tumefaciens]
gi|207366330|emb|CAQ58060.1| recombinase A [Agrobacterium tumefaciens]
gi|207366332|emb|CAQ58061.1| recombinase A [Agrobacterium tumefaciens]
gi|207366334|emb|CAQ58062.1| recombinase A [Agrobacterium tumefaciens]
gi|207366336|emb|CAQ58063.1| recombinase A [Agrobacterium tumefaciens]
gi|207366338|emb|CAQ58064.1| recombinase A [Agrobacterium tumefaciens]
gi|207366340|emb|CAQ58065.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/320 (58%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+++L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ +DSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKTFLRDNPDTANEIE 320
>gi|383451976|ref|YP_005358697.1| recombinase A [Flavobacterium indicum GPTSA100-9]
gi|380503598|emb|CCG54640.1| Recombinase A [Flavobacterium indicum GPTSA100-9]
Length = 333
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/326 (53%), Positives = 249/326 (76%), Gaps = 3/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G + VE SG L LDLALG GG PKGRI+EI+
Sbjct: 8 KLKALQLTLDKLDKTYGKGTVMKMGDSAVEEVEVISSGSLGLDLALGVGGYPKGRIIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAEKLGVDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIA+ + RSGA+D++ +DSV+ALTP++EIEG++G ++GL ARLMSQALRK++G K
Sbjct: 128 LEIAESLIRSGAVDIVVIDSVAALTPKSEIEGDMGDSKMGLHARLMSQALRKLTGTIHKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+ F+NQ+R KIGV +GNPE T+GG ALKF+ASVR++IR + +IK G+ +G R +
Sbjct: 188 NCTVFFINQLRDKIGVMFGNPETTTGGNALKFYASVRVDIRKSSQIKD--GENVIGNRAK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P++ AEF+I++GEGVSK+G +LD A +I+ + G+W+SYG+ +LGQGRD
Sbjct: 246 VKIVKNKVAPPFRTAEFDIMYGEGVSKVGEVLDLAVEFEIIKKSGSWFSYGETKLGQGRD 305
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSD 415
Q ++DNP L +E+E ++ + +
Sbjct: 306 AVKQLIKDNPELMDEVEAKIKETLKE 331
>gi|424881821|ref|ZP_18305453.1| protein RecA [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518184|gb|EIW42916.1| protein RecA [Rhizobium leguminosarum bv. trifolii WU95]
Length = 364
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLP+
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELSLR 335
>gi|241204889|ref|YP_002975985.1| recombinase A [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858779|gb|ACS56446.1| recA protein [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 364
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLP+
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELSLR 335
>gi|229000603|ref|ZP_04160143.1| hypothetical protein bmyco0003_51360 [Bacillus mycoides Rock3-17]
gi|229006025|ref|ZP_04163714.1| hypothetical protein bmyco0002_29460 [Bacillus mycoides Rock1-4]
gi|228755224|gb|EEM04580.1| hypothetical protein bmyco0002_29460 [Bacillus mycoides Rock1-4]
gi|228759158|gb|EEM08164.1| hypothetical protein bmyco0003_51360 [Bacillus mycoides Rock3-17]
Length = 341
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/340 (53%), Positives = 253/340 (74%), Gaps = 7/340 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ ALD A+ I FGKGS+ +LG + T PSG L LD+ALG GG P+GR++EI
Sbjct: 3 DRQAALDMALKQIEKQFGKGSIMKLGEQAERRISTIPSGSLALDVALGVGGYPRGRVIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHAIAEVQ+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 GLEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF+++VRLE+R ++K +G++ VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTVRLEVRRAEQLK--QGNDIVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++GEG+S+ G +LD A +DIV + GAWYSY ++RLGQGR
Sbjct: 241 KIKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIVQKSGAWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM----SDGSVHQGSFL 424
+ A Q+L++NP L++EI +R G++ +G+ L
Sbjct: 301 ENAKQFLKENPELRDEIAFFIREHHGIGEDAGNLEEGAIL 340
>gi|387926959|ref|ZP_10129638.1| recombinase A [Bacillus methanolicus PB1]
gi|387589103|gb|EIJ81423.1| recombinase A [Bacillus methanolicus PB1]
Length = 346
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/347 (52%), Positives = 256/347 (73%), Gaps = 11/347 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ AL+ A+ I FGKGS+ +LG + T PSG L LD ALG GG P+GRI+EI
Sbjct: 3 DRQAALEMALKQIEKQFGKGSIMKLGEQTDRRISTVPSGSLALDAALGVGGYPRGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ LGVD++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQAQGGQAAFIDAEHALDPIYAQKLGVDIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF++++RLE+R ++K +G++ VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTIRLEVRRAEQLK--QGNDMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++GEG+SK G ++D +DI+ + G+WYSY D+RLGQGR
Sbjct: 241 KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDMGSELDIIQKSGSWYSYNDERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQG-SFLRNVSLPNQEE 434
+ A QYL++N L+ EI++ +R H G + ++ ++ P+++E
Sbjct: 301 ENAKQYLKENVELRNEIQQKIRE-------HFGLNEIKTITEPDEQE 340
>gi|358011907|ref|ZP_09143717.1| recombinase A [Acinetobacter sp. P8-3-8]
Length = 348
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 251/325 (77%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL+AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAVDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE VG
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+++A F+I++G+GV+ LG ++D A ++V + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKMAPPFREAVFQIMYGKGVNHLGELVDLAVAQELVQKAGAWYSYQGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ +++L + P L +++++++R +
Sbjct: 302 NNVIRHLEEKPQLAQDLDRMIREKL 326
>gi|409437565|ref|ZP_11264674.1| Recombinase A (recA) [Rhizobium mesoamericanum STM3625]
gi|358029543|emb|CCA94648.1| recombinase A [Rhizobium sp. STM 3625]
gi|408750601|emb|CCM75832.1| Recombinase A (recA) [Rhizobium mesoamericanum STM3625]
Length = 362
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D I+ + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIIEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKLFLRDNPDLLREIETALR 335
>gi|315604454|ref|ZP_07879520.1| recombination protein A [Actinomyces sp. oral taxon 180 str. F0310]
gi|315314160|gb|EFU62211.1| recombination protein A [Actinomyces sp. oral taxon 180 str. F0310]
Length = 363
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/321 (55%), Positives = 242/321 (75%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+ A++ I+ FGKGSV RLG V+ P+G L LD+ALG GGLP+GR++EI
Sbjct: 15 DRNKALEVALSQIDKQFGKGSVMRLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVIEI 74
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ALGVD ++L+V QPD GE
Sbjct: 75 YGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTGEQ 134
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 135 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 194
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR+++R +K + VG R
Sbjct: 195 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDVRRIETLK--EAGAPVGNRT 252
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R +V K+K++ P+KQAEF+I++G+G+S+ G ++D IV + G+W++YGD +LGQG+
Sbjct: 253 RAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGIVRKSGSWFTYGDDQLGQGK 312
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
+ Q+L DNP L EIE+ +
Sbjct: 313 ENVRQFLADNPELANEIEQKI 333
>gi|384566970|ref|ZP_10014074.1| protein RecA [Saccharomonospora glauca K62]
gi|384522824|gb|EIF00020.1| protein RecA [Saccharomonospora glauca K62]
Length = 345
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/330 (56%), Positives = 248/330 (75%), Gaps = 5/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALD A+ I+ FGKGSV RLG VE P+G + LD+ALG GGLP+GRIVEI
Sbjct: 6 DKGKALDLALAQIDKQFGKGSVMRLGENTRPPVEVIPTGAIALDIALGIGGLPRGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+KALGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKALGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 126 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALHN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 186 SGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGGEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G GVS+ G ++D IV + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDILYGIGVSREGSLIDMGVDQGIVRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++ A ++LR+NP + EIEK ++ + G+
Sbjct: 303 KENARRFLRENPDVANEIEKKIKEKLGIGA 332
>gi|283783473|ref|YP_003374227.1| recombinase A [Gardnerella vaginalis 409-05]
gi|298252554|ref|ZP_06976348.1| RecA/RadA DNA recombinase [Gardnerella vaginalis 5-1]
gi|283442058|gb|ADB14524.1| RecA protein [Gardnerella vaginalis 409-05]
gi|297532918|gb|EFH71802.1| RecA/RadA DNA recombinase [Gardnerella vaginalis 5-1]
Length = 379
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/336 (53%), Positives = 249/336 (74%), Gaps = 6/336 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R RQ AL+ A+ ++ +GKGS RLG VE P+G L LD ALG
Sbjct: 14 IDADKTDPR---RQAALETALANVERQYGKGSAMRLGDRPMQDVEVIPTGSLALDTALGI 70
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD +
Sbjct: 71 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDA 130
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 131 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 190
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR++IR IK
Sbjct: 191 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRMDIRRVSTIK- 249
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
+G+E VG R +V++ K+K++ P+K AEF++++GEG+S G ++D +++ + G+W+
Sbjct: 250 -EGEEAVGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQAEVIKKSGSWF 308
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMM 413
+Y ++LGQGR+ ++L+DNP + EEI + V++++
Sbjct: 309 TYDGEQLGQGRENVRKFLKDNPAITEEISEKVKALL 344
>gi|296112538|ref|YP_003626476.1| recombination protein RecA [Moraxella catarrhalis RH4]
gi|416216870|ref|ZP_11623904.1| recombinase A [Moraxella catarrhalis 7169]
gi|416229548|ref|ZP_11628086.1| recombinase A [Moraxella catarrhalis 46P47B1]
gi|416240237|ref|ZP_11632301.1| recombinase A [Moraxella catarrhalis BC1]
gi|416242132|ref|ZP_11633266.1| recombinase A [Moraxella catarrhalis BC7]
gi|416247761|ref|ZP_11635908.1| recombinase A [Moraxella catarrhalis BC8]
gi|416249097|ref|ZP_11636375.1| recombinase A [Moraxella catarrhalis CO72]
gi|421779352|ref|ZP_16215845.1| recombination protein RecA [Moraxella catarrhalis RH4]
gi|295920232|gb|ADG60583.1| recombination protein RecA [Moraxella catarrhalis BBH18]
gi|326561307|gb|EGE11665.1| recombinase A [Moraxella catarrhalis 7169]
gi|326562548|gb|EGE12863.1| recombinase A [Moraxella catarrhalis 46P47B1]
gi|326566176|gb|EGE16330.1| recombinase A [Moraxella catarrhalis BC1]
gi|326569092|gb|EGE19155.1| recombinase A [Moraxella catarrhalis BC8]
gi|326571693|gb|EGE21708.1| recombinase A [Moraxella catarrhalis BC7]
gi|326576322|gb|EGE26232.1| recombinase A [Moraxella catarrhalis CO72]
gi|407813492|gb|EKF84273.1| recombination protein RecA [Moraxella catarrhalis RH4]
Length = 349
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 244/323 (75%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I FGK ++ LG L V+ +G L LD+ALG GGLPKGRI+E
Sbjct: 4 NKEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTTL L IAE QK GG +DAEHA DP Y+K LGV++++L+V QPDNGE
Sbjct: 64 IFGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA
Sbjct: 124 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K GDE +G
Sbjct: 184 RSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKD--GDEIIGSE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+++LG ++D + V + GAWYSYGD ++GQG
Sbjct: 242 TRVKVIKNKMAPPFRQTEFQIMYGEGINRLGEVIDLGVDIGAVGKSGAWYSYGDGKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
+ ++YL++NP + EIE VR
Sbjct: 302 KANTVKYLQENPAIASEIEAKVR 324
>gi|148653778|ref|YP_001280871.1| recombinase A [Psychrobacter sp. PRwf-1]
gi|172048565|sp|A5WGY0.1|RECA_PSYWF RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|148572862|gb|ABQ94921.1| recA protein [Psychrobacter sp. PRwf-1]
Length = 349
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 245/324 (75%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +AL AA+ I FGK ++ LG L V+ +G L LD+ALG GGLPKGRI+E
Sbjct: 4 NKAKALKAALGQIEKQFGKNTIMHLGDNSATLDVDVVSTGSLGLDIALGIGGLPKGRIIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L AIAE QK GG +DAEHA DP Y++ LGV+ ++L+V QPDNGE
Sbjct: 64 IYGPESSGKTTLTLQAIAECQKQGGTCAFIDAEHALDPIYARKLGVNTDDLLVSQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D+I +DSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GNA
Sbjct: 124 QALEITDMLVRSGALDMIVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +KS GDE +G +
Sbjct: 184 RSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKS--GDEIIGNQ 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++QAEFEI +GEG + L ++D + +V + GAWYSYGD+++GQG
Sbjct: 242 TRVKVIKNKMAPPFRQAEFEITYGEGTNHLAEVIDLGVEIGVVGKAGAWYSYGDEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
+ ++ +L+DNP + EEIE +R+
Sbjct: 302 KANSVLFLKDNPAIAEEIEAKIRA 325
>gi|424887837|ref|ZP_18311440.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393173386|gb|EJC73430.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 362
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLP+
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELSLR 335
>gi|182679357|ref|YP_001833503.1| recA protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635240|gb|ACB96014.1| recA protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 343
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 251/325 (77%), Gaps = 6/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + A+ +ET +G L LD+ALG GGLP+GR++
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGKSQKAIEIETISTGSLGLDIALGVGGLPRGRVI 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTL LH IAE QK GG +DAEHA DP Y++ LGV++++L++ QPD G
Sbjct: 61 EIYGPESSGKTTLTLHVIAEAQKKGGVCAFIDAEHALDPVYARKLGVNLDDLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ +DSV+ALTPRAEIEGE+G Q GLQARLMSQALRK++ +
Sbjct: 121 EQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDNQPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV-G 325
S++ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR +I S+K ED+ G
Sbjct: 181 SRSQTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIR---RIGSIKDREDITG 237
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
+ RV+V K+KV+ P+KQ EF+I++GEGVSK+G ++D +V + GAW+SY QRLG
Sbjct: 238 NQTRVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELVDLGVKAGVVEKSGAWFSYDSQRLG 297
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVR 410
QGR+ A +L++NP + ++IE +R
Sbjct: 298 QGRENAKTFLKNNPEVADKIEMTIR 322
>gi|111225078|ref|YP_715872.1| recombinase A [Frankia alni ACN14a]
gi|123142675|sp|Q0RDW5.1|RECA_FRAAA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|111152610|emb|CAJ64351.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Frankia alni ACN14a]
Length = 346
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 245/327 (74%), Gaps = 5/327 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
LDR +ALD A+ I+ +FGKGSV RLG ++ P+G + LD+ALG GGLPKGR++E
Sbjct: 5 LDRDKALDNALAQIDKAFGKGSVMRLGDDTRPPIQAIPTGSIALDVALGIGGLPKGRVIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHA+A Q GG A +DAEHA DP Y+ LGVD++NL+V QPD GE
Sbjct: 65 IYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDIDNLLVSQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+ +
Sbjct: 125 QALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTAALA 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG
Sbjct: 185 NSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGTEAVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P++ AEF+I++G G+S+ G ++D I+ + GAWY+Y +LGQ
Sbjct: 242 RTRVKVVKNKVAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMM 413
G++ A +LRDNP L EIEK ++ +
Sbjct: 302 GKENARSFLRDNPDLANEIEKKIKEKL 328
>gi|125973565|ref|YP_001037475.1| recA protein [Clostridium thermocellum ATCC 27405]
gi|256003384|ref|ZP_05428375.1| recA protein [Clostridium thermocellum DSM 2360]
gi|281417770|ref|ZP_06248790.1| recA protein [Clostridium thermocellum JW20]
gi|385778513|ref|YP_005687678.1| recA protein [Clostridium thermocellum DSM 1313]
gi|419723659|ref|ZP_14250774.1| Protein recA [Clostridium thermocellum AD2]
gi|419724516|ref|ZP_14251578.1| Protein recA [Clostridium thermocellum YS]
gi|125713790|gb|ABN52282.1| recA protein [Clostridium thermocellum ATCC 27405]
gi|255992674|gb|EEU02765.1| recA protein [Clostridium thermocellum DSM 2360]
gi|281409172|gb|EFB39430.1| recA protein [Clostridium thermocellum JW20]
gi|316940193|gb|ADU74227.1| recA protein [Clostridium thermocellum DSM 1313]
gi|380772063|gb|EIC05921.1| Protein recA [Clostridium thermocellum YS]
gi|380780341|gb|EIC10024.1| Protein recA [Clostridium thermocellum AD2]
Length = 349
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 250/324 (77%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++++AL+ + I FGKG+V +LG +ET P+G L LD+ALG GG+P+GRIV
Sbjct: 1 MIEKKKALEMVLGQIEKQFGKGAVMKLGENTHMNIETIPTGALGLDIALGVGGVPRGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+K LGVD+ENLIV QPD G
Sbjct: 61 EIFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKNLGVDIENLIVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGAID+I +DSV+AL P+AEI+GE+G +GLQARLMSQALRK++G
Sbjct: 121 EQALEIAEALVRSGAIDVIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGVI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ T IF+NQ+R K+GV +GNPE T GG ALKF+ASVRL++R IK +G+E +G
Sbjct: 181 NKSRTTAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRRLESIK--QGNEVIGS 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R +V+V K+KV+ P+K+AEF+II+G+G+SK G +LD A +DIV + GAW+SY Q++GQ
Sbjct: 239 RTKVKVVKNKVAPPFKEAEFDIIYGQGISKEGNILDVAVNLDIVNKSGAWFSYNGQKIGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L++NP + +EIE +R
Sbjct: 299 GRENAKQFLKENPEIAKEIETKIR 322
>gi|163786978|ref|ZP_02181425.1| DNA recombination protein [Flavobacteriales bacterium ALC-1]
gi|159876866|gb|EDP70923.1| DNA recombination protein [Flavobacteriales bacterium ALC-1]
Length = 334
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 249/324 (76%), Gaps = 2/324 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL ++ ++ ++GKG+V ++ V+ SG L LD+ALG GG P+GR++EI+GP
Sbjct: 10 KALKLTLDKLDKAYGKGTVMKMSDQAIEDVDAISSGSLGLDIALGVGGYPRGRVIEIYGP 69
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVD+ENLI+ QPDNGE ALE
Sbjct: 70 ESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAEKLGVDLENLIISQPDNGEQALE 129
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD + RSGAID+I +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ + SK C
Sbjct: 130 IADNLVRSGAIDIIVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTASISKTNC 189
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
T++F+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK + +G + RV+
Sbjct: 190 TMVFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDSNSNV-MGNKTRVK 248
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+KV+ P++ AEF+I++GEG+SK+G +LD A DIV + G+W+SY D +LGQGRD
Sbjct: 249 VVKNKVAPPFRLAEFDIMYGEGISKVGEVLDLAVEHDIVKKSGSWFSYQDTKLGQGRDAV 308
Query: 392 LQYLRDNPLLQEEIEKVVRSMMSD 415
++DNP L +E+E+ VR++++D
Sbjct: 309 KALIKDNPDLMDELEEKVRALIND 332
>gi|209549552|ref|YP_002281469.1| recombinase A [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|402487937|ref|ZP_10834752.1| recombinase A [Rhizobium sp. CCGE 510]
gi|424913756|ref|ZP_18337120.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM597]
gi|226723636|sp|B5ZRG2.1|RECA_RHILW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|209535308|gb|ACI55243.1| recA protein [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|363399254|gb|AEW16333.1| recombination protein A [Rhizobium sp. CCGE 510]
gi|392849932|gb|EJB02453.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM597]
gi|401813105|gb|EJT05452.1| recombinase A [Rhizobium sp. CCGE 510]
Length = 362
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLP+
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP L EIE +R
Sbjct: 308 RLGQGRENAKTFLRDNPDLAREIELSLR 335
>gi|283798535|ref|ZP_06347688.1| protein RecA [Clostridium sp. M62/1]
gi|291073798|gb|EFE11162.1| RecA protein [Clostridium sp. M62/1]
gi|295090129|emb|CBK76236.1| protein RecA [Clostridium cf. saccharolyticum K10]
gi|295115571|emb|CBL36418.1| protein RecA [butyrate-producing bacterium SM4/1]
Length = 365
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/324 (55%), Positives = 252/324 (77%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I ++GKGSV +LG +G + +ET P+G L+LD+ALG GG+P+GRI+E
Sbjct: 9 EKLKALDAALTQIEKAYGKGSVMKLGDSGANMNIETVPTGSLSLDIALGLGGVPRGRIIE 68
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPDNGE
Sbjct: 69 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGE 128
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+GE+G +GLQARLMSQALRK++ S
Sbjct: 129 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAIIS 188
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R +K +G E VG R
Sbjct: 189 KSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYASVRMDVRRIETLK--QGGEMVGNR 246
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VR++V K+K++ P+K+AEF+I+FG+G+SK G +LD A +IV + GAWY+Y ++GQG
Sbjct: 247 VRIKVVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAAKENIVEKSGAWYAYNGSKIGQG 306
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A +L+ N L +EIE VR+
Sbjct: 307 RENAKNFLQANQELCQEIEAKVRA 330
>gi|207366322|emb|CAQ58056.1| recombinase A [Agrobacterium tumefaciens]
gi|207366326|emb|CAQ58058.1| recombinase A [Agrobacterium tumefaciens]
gi|207366356|emb|CAQ58073.1| recombinase A [Agrobacterium tumefaciens]
gi|207366358|emb|CAQ58074.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 244/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKIFLRDNPETANEIE 320
>gi|225017549|ref|ZP_03706741.1| hypothetical protein CLOSTMETH_01476 [Clostridium methylpentosum
DSM 5476]
gi|224949699|gb|EEG30908.1| hypothetical protein CLOSTMETH_01476 [Clostridium methylpentosum
DSM 5476]
Length = 392
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 247/328 (75%), Gaps = 3/328 (0%)
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
SG D+++AL+ A+ I FG+G+V +LG A VE +G + +D+ALG GG+P
Sbjct: 13 SGSDILSDKKKALETALAQIEKQFGQGAVMKLGQATAMNVEAISTGSIGMDIALGIGGVP 72
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
+GRIVEI+GPESSGKTT+AL +A+ QK GG A +D EHA DP Y+KALGVD+++L+V
Sbjct: 73 RGRIVEIYGPESSGKTTVALSIVAQAQKAGGEAAFIDVEHALDPVYAKALGVDIDSLLVS 132
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QP++GE ALEIA+ + RSGAID+I +DSV+A+T +AEIEGE+G +GLQARLMSQA+RK
Sbjct: 133 QPNSGEQALEIAEALVRSGAIDVIVIDSVAAMTTKAEIEGEMGDTHVGLQARLMSQAMRK 192
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
++G K C +F+NQ+R KIGV YGNPE T GG ALKF++SVR+EIR + +IK+ G
Sbjct: 193 LTGIIGKTNCVALFINQVREKIGVMYGNPETTPGGRALKFYSSVRMEIRRSEQIKN--GS 250
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E +G R R +V K+KV+ P+K+AEF+I++GEG+S+ G +LD A +DIV R GAWY+Y
Sbjct: 251 EVIGNRTRCKVVKNKVAPPFKEAEFDIMYGEGISQTGEILDLATNLDIVNRSGAWYNYNG 310
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVV 409
+RLGQGRD A YL +NP L EE+ K+V
Sbjct: 311 ERLGQGRDNAKAYLAENPELCEELRKLV 338
>gi|397618145|gb|EJK64774.1| hypothetical protein THAOC_14458 [Thalassiosira oceanica]
Length = 401
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/323 (56%), Positives = 242/323 (74%), Gaps = 5/323 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
++ ALD + I ++G+GSV LG A V+ F SG +TLD ALGGG PKGR+VEI+G
Sbjct: 62 KKAALDGVLQRIERNYGRGSVVMLGDADRMTVDCFGSGSMTLDTALGGGYPKGRVVEIYG 121
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLALHA+AE Q GG A VDAEHA DPSY+ ALGVDV+NL+V QPD+GEMAL
Sbjct: 122 PESSGKTTLALHALAEAQMNGGIAAFVDAEHALDPSYAAALGVDVDNLLVSQPDSGEMAL 181
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
+I D++ RS A+D+I VDSV+AL PRAE+EGE+ Q+GLQARLMS+A+RK++ + S +
Sbjct: 182 DIVDQLVRSSAVDVIVVDSVAALVPRAELEGEMSDMQVGLQARLMSKAMRKITASLSMSQ 241
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IFLNQ+R K+GV YG+PEVTSGG ALKF+ASVRL+ R + E++G+R +V
Sbjct: 242 CTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRREVLP-----ENMGIRAKV 296
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
++ K+KV+ P+K E +I+FG+G+ K G +LD A +D+V RKG+WYSY +Q QGR
Sbjct: 297 KIVKNKVAAPFKVVELDILFGQGIDKFGSLLDAALDLDVVQRKGSWYSYNNQNFAQGRIN 356
Query: 391 ALQYLRDNPLLQEEIEKVVRSMM 413
A YL++NP + ++IE VR M
Sbjct: 357 ASHYLKENPAIAKKIESEVRDAM 379
>gi|415711479|ref|ZP_11464216.1| recombinase A [Gardnerella vaginalis 55152]
gi|388058313|gb|EIK81110.1| recombinase A [Gardnerella vaginalis 55152]
Length = 384
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/333 (53%), Positives = 248/333 (74%), Gaps = 6/333 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R R+ AL+ A+ ++ +GKGS RLG VE P+G + LD+ALG
Sbjct: 14 IDADKADPR---RKAALETALANVEKQYGKGSAMRLGDKPLQDVEVIPTGSIALDMALGI 70
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++
Sbjct: 71 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGIAAFIDAEHALDPVYARKLGVDTDS 130
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 131 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 190
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF++SVR++IR IK+
Sbjct: 191 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYSSVRMDIRRVSTIKN 250
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
G+E VG R +V++ K+K++ P+K AEF++++GEG+S G ++D A D++ + G+W+
Sbjct: 251 --GEEAVGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMAVQCDVIKKSGSWF 308
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
+Y ++LGQGR+ Q+L+DNP + EEI V+
Sbjct: 309 TYEGEQLGQGRENVRQFLKDNPAITEEISDKVK 341
>gi|132237|sp|P27865.1|RECA_RHIME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|581521|emb|CAA42580.1| RecA protein [Sinorhizobium meliloti]
Length = 348
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LG+ + +ET +G L LD+ALG GGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ +DSV+AL PRAEIEGE+G G+QARLMSQALRK++ +
Sbjct: 121 EQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 181 SKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR+NP L EIE +R
Sbjct: 299 GRENAKLFLRENPELLREIETALR 322
>gi|354605274|ref|ZP_09023263.1| recA [Alistipes indistinctus YIT 12060]
gi|353347853|gb|EHB92129.1| recA [Alistipes indistinctus YIT 12060]
Length = 335
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 248/326 (76%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ + L A M+ I FGKG++ ++ S +V SG +TLD ALG GG PKGR++EI
Sbjct: 10 EKLKVLSAVMDKIEKDFGKGAIMKMSSKAVEIVPVIRSGSITLDQALGIGGYPKGRVIEI 69
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA+HAIAE QK GG A +DAEHAFD +Y++ LGVD++ L++ QPDNGE
Sbjct: 70 YGPESSGKTTLAIHAIAEAQKAGGIAAFIDAEHAFDSTYAQKLGVDIDELLISQPDNGEQ 129
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RS AID++ +DSV+ALTP+AEIEGE+G ++GLQARLMSQALRK++ + SK
Sbjct: 130 ALEIADHLIRSSAIDIVVIDSVAALTPKAEIEGEMGEAKMGLQARLMSQALRKLTASISK 189
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G IF+NQ+R KIGV YGNPE T+GG ALKF+ASVR++IR IK G+E +G R
Sbjct: 190 TGTVCIFINQLRDKIGVVYGNPETTTGGNALKFYASVRVDIRKASVIKD--GEEQMGARA 247
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V++ K+K++ P+++AEF+I++GEG+SKLG ++D I+ + G+W+SYGDQ+LGQGR
Sbjct: 248 KVKIVKNKLAPPFRRAEFDIMYGEGISKLGEIIDLGVDNGIIKKSGSWFSYGDQKLGQGR 307
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
D + L++N L++EIE VR+ ++
Sbjct: 308 DAVKEALKNNDALRDEIETKVRAALT 333
>gi|320094021|ref|ZP_08025846.1| recombination protein A [Actinomyces sp. oral taxon 178 str. F0338]
gi|319979065|gb|EFW10583.1| recombination protein A [Actinomyces sp. oral taxon 178 str. F0338]
Length = 375
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/322 (55%), Positives = 244/322 (75%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL A++ I+ FGKGSV RLG V+ P+G L LD+ALG GGLP+GR++EI
Sbjct: 29 DRNKALQVALSQIDKQFGKGSVMRLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVIEI 88
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ALGVD ++L+V QPD GE
Sbjct: 89 YGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTGEQ 148
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 149 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 208
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR+++R +I+++K VG R
Sbjct: 209 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDVR---RIETLKEAGAPVGNR 265
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+K++ P+KQAEF+I++G+G+S+ G ++D IV + G+W++YGD +LGQG
Sbjct: 266 TRAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVDTGIVRKSGSWFTYGDDQLGQG 325
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ Q+L DNP L EIE+ +
Sbjct: 326 KENVRQFLADNPALAGEIEQKI 347
>gi|315607474|ref|ZP_07882469.1| recombination protein A [Prevotella buccae ATCC 33574]
gi|402307217|ref|ZP_10826244.1| RecA protein [Prevotella sp. MSX73]
gi|315250657|gb|EFU30651.1| recombination protein A [Prevotella buccae ATCC 33574]
gi|400379057|gb|EJP31906.1| RecA protein [Prevotella sp. MSX73]
Length = 341
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 240/323 (74%), Gaps = 3/323 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL AAM I FGKGS+ R+G VE +G + LD+ALG GG P+GRI+EI+GP
Sbjct: 17 KALQAAMAKIEKDFGKGSIMRMGDEQIENVEVIHTGSIALDVALGVGGYPRGRIIEIYGP 76
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTLA+HAIAE QK GG A +DAEHAFD Y+ LGVDV+NL + QPDNGE ALE
Sbjct: 77 ESSGKTTLAIHAIAEAQKAGGIAAFIDAEHAFDRFYAAKLGVDVDNLWISQPDNGEQALE 136
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD++ RS AID++ +DSV+ALTP+ EIEG++G +GLQARLMSQALRK++ SK
Sbjct: 137 IADQLIRSSAIDILVIDSVAALTPKKEIEGDMGDSAVGLQARLMSQALRKLTSTISKTNT 196
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR T IK GD+ +G +VRV+
Sbjct: 197 TCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRKTTSIKD--GDQIIGNQVRVK 254
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+KV+ P+++AEFEI FGEG+SK+G +LD DIV + G+W+SY +LGQGRD
Sbjct: 255 VIKNKVAPPFRKAEFEITFGEGISKVGEILDLGVEYDIVKKSGSWFSYNGSKLGQGRDAT 314
Query: 392 LQYLRDNPLLQEEIEKVVRSMMS 414
L+DNP L EE+E ++ ++
Sbjct: 315 KNLLKDNPELCEELEAKIKEAIA 337
>gi|300776146|ref|ZP_07086005.1| recombination protein A [Chryseobacterium gleum ATCC 35910]
gi|300505279|gb|EFK36418.1| recombination protein A [Chryseobacterium gleum ATCC 35910]
Length = 333
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 255/333 (76%), Gaps = 5/333 (1%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKG 143
S D+++AL ++ ++ ++GKG+V LG A +E PSG L LD+ALG GG PKG
Sbjct: 2 SNIDDKKKALALVLDKLDKTYGKGTVMTLGDDAVDTTIEVIPSGSLGLDIALGVGGYPKG 61
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RI+EI+GPESSGKTTL LHAIAE QK GG A +DAEHAFD +Y+ LG+D+ENLI+ QP
Sbjct: 62 RIIEIYGPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRTYAAKLGIDLENLIISQP 121
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
DNGE ALEIAD + RSGAID++ +DSV+ALTP+AEIEGE+G ++GL ARLMSQALRK++
Sbjct: 122 DNGEQALEIADNLIRSGAIDIVVIDSVAALTPKAEIEGEMGDSKMGLHARLMSQALRKLT 181
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIR-STGKIKSVKGDE 322
S+ CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVR++IR ++ IK +GDE
Sbjct: 182 ATISRTKCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRIDIRKASAPIK--QGDE 239
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G RV+V++ K+KV+ P+KQAEF+I++GEGVSK+G +LD A M IV + G+W+SY +
Sbjct: 240 AIGSRVKVKIVKNKVAPPFKQAEFDIMYGEGVSKVGEILDTAVDMGIVKKSGSWFSYEET 299
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSD 415
+LGQGRD LRDNP L EE+E ++ M +
Sbjct: 300 KLGQGRDAVKDVLRDNPDLAEELEAKIKEEMKN 332
>gi|451339111|ref|ZP_21909636.1| RecA protein [Amycolatopsis azurea DSM 43854]
gi|449418284|gb|EMD23882.1| RecA protein [Amycolatopsis azurea DSM 43854]
gi|452957561|gb|EME62925.1| recombination protein RecA [Amycolatopsis decaplanina DSM 44594]
Length = 346
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 249/329 (75%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL+ A+ I+ +GKGSV RLG G A +E P+G + LD+ALG GGLP+GR++EI
Sbjct: 7 DKDKALELALAQIDKQYGKGSVMRLGEEGRAPIEVIPTGAIALDVALGIGGLPRGRVIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHAVANAQKNGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+G +
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDNHVGLQARLMSQALRKMTGAMNN 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 187 SGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGGEPVGNR 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+GVS+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 244 TRVKVVKNKVAPPFKQAEFDILYGKGVSREGSLIDMGVDQGILRKSGAWYTYEGDQLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A ++L DNP + EIEK ++ + G
Sbjct: 304 KENARKFLLDNPDIANEIEKRIKEKLGIG 332
>gi|396585089|ref|ZP_10485520.1| RecA protein [Actinomyces sp. ICM47]
gi|395547179|gb|EJG14669.1| RecA protein [Actinomyces sp. ICM47]
Length = 365
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 242/321 (75%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+ A++ I+ FGKGSV RLG V+ P+G L LD+ALG GGLP+GR++E+
Sbjct: 15 DRNKALEVALSQIDKQFGKGSVMRLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVIEV 74
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ALGVD ++L+V QPD GE
Sbjct: 75 YGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTGEQ 134
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 135 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 194
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR+++R +K + VG R
Sbjct: 195 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDVRRIETLK--EAGSPVGNRT 252
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R +V K+K++ P+KQAEF+I++G+G+S+ G ++D IV + G+W++YGD +LGQG+
Sbjct: 253 RAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGIVRKSGSWFTYGDDQLGQGK 312
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
+ Q+L DNP L EIE+ +
Sbjct: 313 ENVRQFLVDNPELANEIEQKI 333
>gi|299131743|ref|ZP_07024938.1| recA protein [Afipia sp. 1NLS2]
gi|298591880|gb|EFI52080.1| recA protein [Afipia sp. 1NLS2]
Length = 360
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 245/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV RLG A ++ +E SG L LD+ALG GGLPKGR+V
Sbjct: 14 MDKTKALTAALSQIERQFGKGSVMRLGKADRSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV+V+ L++ QPD+G
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ VDSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK + DE +G
Sbjct: 194 NKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--ERDEVIGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD IV + GAW+SY QRLGQ
Sbjct: 252 STRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ + +LRDNP + +IE +R
Sbjct: 312 GRENSKAFLRDNPDMTAKIEAAIR 335
>gi|114569557|ref|YP_756237.1| recA protein [Maricaulis maris MCS10]
gi|114340019|gb|ABI65299.1| RecA protein [Maricaulis maris MCS10]
Length = 359
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 252/328 (76%), Gaps = 3/328 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
+ + +D+++A++AA++ I+ +FGKGSV +LG +ET +G L LD+ALG GGLPKG
Sbjct: 11 NEKNMDKEKAIEAALSQIDKAFGKGSVMKLGQKPAMEIETISTGSLGLDIALGIGGLPKG 70
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RI+EI+GPESSGKTTLALH +AE QK GG A VDAEHA DP Y+ LGVD+ L++ QP
Sbjct: 71 RIIEIYGPESSGKTTLALHTVAEAQKAGGVAAFVDAEHALDPVYAGKLGVDLGELLISQP 130
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEIAD + RSGAID++ +DSV+ALTPRAE+EGE+G GLQARLMSQALRK++
Sbjct: 131 DTGEQALEIADTLVRSGAIDILVIDSVAALTPRAELEGEMGDSLPGLQARLMSQALRKLT 190
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
G+ SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK+ DE
Sbjct: 191 GSISKSKCLVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKNR--DEV 248
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
+G + RV+V K+KV+ P+++ EF+I++GEG+SK+G ++D D++ + G+WYSY +R
Sbjct: 249 IGNQTRVKVVKNKVAPPFREVEFDILYGEGISKMGELIDLGVKGDVIEKSGSWYSYNSER 308
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+GQGR+ A Q+L ++ + +IE VRS
Sbjct: 309 IGQGRENARQFLLEHGDIAADIEARVRS 336
>gi|288924592|ref|ZP_06418529.1| protein RecA [Prevotella buccae D17]
gi|288338379|gb|EFC76728.1| protein RecA [Prevotella buccae D17]
Length = 349
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 240/323 (74%), Gaps = 3/323 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL AAM I FGKGS+ R+G VE +G + LD+ALG GG P+GRI+EI+GP
Sbjct: 25 KALQAAMAKIEKDFGKGSIMRMGDEQIENVEVIHTGSIALDVALGVGGYPRGRIIEIYGP 84
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTLA+HAIAE QK GG A +DAEHAFD Y+ LGVDV+NL + QPDNGE ALE
Sbjct: 85 ESSGKTTLAIHAIAEAQKAGGIAAFIDAEHAFDRFYAAKLGVDVDNLWISQPDNGEQALE 144
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD++ RS AID++ +DSV+ALTP+ EIEG++G +GLQARLMSQALRK++ SK
Sbjct: 145 IADQLIRSSAIDILVIDSVAALTPKKEIEGDMGDSAVGLQARLMSQALRKLTSTISKTNT 204
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR T IK GD+ +G +VRV+
Sbjct: 205 TCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRKTTSIKD--GDQIIGNQVRVK 262
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+KV+ P+++AEFEI FGEG+SK+G +LD DIV + G+W+SY +LGQGRD
Sbjct: 263 VIKNKVAPPFRKAEFEITFGEGISKVGEILDLGVEYDIVKKSGSWFSYNGSKLGQGRDAT 322
Query: 392 LQYLRDNPLLQEEIEKVVRSMMS 414
L+DNP L EE+E ++ ++
Sbjct: 323 KNLLKDNPELCEELEAKIKEAIA 345
>gi|37700516|gb|AAR00257.1| RecA [Azospirillum lipoferum]
Length = 369
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/325 (58%), Positives = 247/325 (76%), Gaps = 6/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVET--FPSGCLTLDLALG-GGLPKGRI 145
+D+Q+ALDAA++ I +FGKGS+ +LG A LVET +G L LD+ALG GGLPKGRI
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLG-ARENLVETEVISTGSLGLDIALGIGGLPKGRI 72
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
VEI+GPESSGKTTLALHAIA+ QK GG VDAEHA DPSY++ LGV+++ L++ QPD
Sbjct: 73 VEIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDA 132
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G GL ARLMSQALRK++G+
Sbjct: 133 GEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDAMSGLHARLMSQALRKLTGS 192
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
SK+ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 193 ISKSNCLVIFINQIRLKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKDR--DTVVG 250
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
+ RV+V K+K++ P++ EF+I++GEGVSK+G +LD +V + GAW+SY R+G
Sbjct: 251 NQTRVKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVDKSGAWFSYDGTRIG 310
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVR 410
QGR+ A YLR+NP + + IE +R
Sbjct: 311 QGRENAKTYLRNNPEMADAIEAKIR 335
>gi|388256999|ref|ZP_10134179.1| recombinase A [Cellvibrio sp. BR]
gi|387939203|gb|EIK45754.1| recombinase A [Cellvibrio sp. BR]
Length = 347
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/323 (54%), Positives = 246/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL AA++ I FGKG+V R+G + +G L LD+ALG GGLPKGRI+EI
Sbjct: 4 NKEKALQAALSQIERQFGKGTVMRMGDKEQVAIPAISTGSLGLDVALGIGGLPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IAE Q++GG +DAEHA DP Y+ LGV+VE+LI+ QPD GE
Sbjct: 64 YGPESSGKTTLTLQVIAEAQRMGGTCAFIDAEHALDPIYASKLGVNVEDLIISQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALE+ D + RSGA+D++ VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GN
Sbjct: 124 ALEVTDMLVRSGAVDVLVVDSVAALTPRAEIEGEMGDHHVGLQARLMSQALRKITGNIKN 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
A C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G +K +G+E VG
Sbjct: 184 ANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVK--EGEEVVGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++G G++++G ++D + ++ + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKVAPPFKQAEFQILYGSGINRMGEVVDYGVKLGMIDKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ +++L++NP++ +E+E+ VR+
Sbjct: 302 NNVMKFLQENPIIAQELEQRVRT 324
>gi|389775396|ref|ZP_10193362.1| recombinase A [Rhodanobacter spathiphylli B39]
gi|388437437|gb|EIL94238.1| recombinase A [Rhodanobacter spathiphylli B39]
Length = 345
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 244/325 (75%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL +A+ I FGKG+V R+G +ET +G L LD+ALG GGLP+GR+VEI
Sbjct: 4 NKRKALTSALGQIEKQFGKGAVMRMGDRVNEAIETISTGSLGLDIALGVGGLPRGRVVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA Q+ GG A +DAEHA DP+Y++ LGV V++L+V QPD GE
Sbjct: 64 YGPESSGKTTMTLQAIASCQRAGGTAAFIDAEHALDPTYAEKLGVKVDDLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ VDSV+ALTP+AEIEGE+G +GL ARLMSQALRK++ N K
Sbjct: 124 ALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHARLMSQALRKLTANIKK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+GC +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K KGDE +G
Sbjct: 184 SGCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--KGDEIIGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P++Q EFEI++GEG S+ G +++ +++ + GAWYSY R+GQG+
Sbjct: 242 RVKVVKNKVAPPFRQTEFEILYGEGTSREGEIIELGVAQNLIDKSGAWYSYNGDRIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ Q+LRDNP + EI+K +R +
Sbjct: 302 ENVRQFLRDNPAIANEIDKQLRERL 326
>gi|207366324|emb|CAQ58057.1| recombinase A [Agrobacterium tumefaciens]
gi|207366354|emb|CAQ58072.1| recombinase A [Agrobacterium tumefaciens]
gi|207366360|emb|CAQ58075.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 244/320 (76%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKIFLRDNPETANEIE 320
>gi|347727092|gb|AEP19904.1| multifunctional SOS repair factor [Exiguobacterium sp. N39]
Length = 349
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+ A+ I FGKGS+ RLG V PSG + LD+ALG GG P+GR++E+
Sbjct: 3 DRKQALEMALRQIEKQFGKGSIMRLGENTDQQVSVTPSGSIALDIALGAGGYPRGRVIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A VDAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKRGGQAAFVDAEHALDPKYAQNLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGATNK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIG+ +GNPE T GG ALKF++SVRLE+R +K +G + VG R
Sbjct: 183 SKTIVIFINQIREKIGIMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGQDMVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+K++ P+K AE +I++GEG+S+ G ++D +DIV + GAWYSY ++RLGQGR
Sbjct: 241 KIKVVKNKIAPPFKTAEVDIMYGEGISREGELIDIGADLDIVQKSGAWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QY+++NP + +E+ +R
Sbjct: 301 ENAKQYMKENPSVAASVEERIR 322
>gi|328957009|ref|YP_004374395.1| recombinase A [Carnobacterium sp. 17-4]
gi|328673333|gb|AEB29379.1| recombinase A [Carnobacterium sp. 17-4]
Length = 347
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/323 (54%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I +FGKGSV +LG + T PSG L LD+ALG GG P+GRI+E+
Sbjct: 4 DRKQALDAALKKIEKNFGKGSVMKLGEKVDTRISTVPSGSLALDVALGVGGFPRGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AEVQK GG A +DAE+A DP Y+ ALGVD++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAVAEVQKQGGIAAFIDAENALDPKYAAALGVDIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAVDIVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPE+T GG ALKF+A++RLE+R +IK +G + +G R
Sbjct: 184 TKTIALFINQIREKVGVMFGNPEITPGGRALKFYATIRLEVRRAEQIK--QGTDIMGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++GEG+S++G ++D DI+ + GAWYSYG +R+GQGR
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGEGISQVGELVDMGSDKDIIDKAGAWYSYGGERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A ++ ++NP L+ E+E+ VR+
Sbjct: 302 ENAKKFFKNNPELRAEVEQKVRA 324
>gi|256375557|ref|YP_003099217.1| recA protein [Actinosynnema mirum DSM 43827]
gi|255919860|gb|ACU35371.1| recA protein [Actinosynnema mirum DSM 43827]
Length = 347
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/331 (54%), Positives = 250/331 (75%), Gaps = 5/331 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+ A+ I+ FGKGSV RLG G A +E P+G + LD+ALG GGLP+GR+VEI
Sbjct: 7 DRDKALELALAQIDKQFGKGSVMRLGEDGRAPIEVIPTGAIALDVALGIGGLPRGRVVEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y++ LGVD + L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHAVANAQRNGGIAAFIDAEHALDPDYARKLGVDTDALLVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 127 ALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDNHVGLQARLMSQALRKITGALNS 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 187 SGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGGEPVGNR 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 244 TRVKVVKNKVAPPFKQAEFDILYGHGISREGSLIDMGVDQGILRKSGAWYTYEGDQLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
++ A ++LR+NP + EIEK ++ + G+
Sbjct: 304 KENARKFLRENPDVANEIEKRIKEKLGIGAT 334
>gi|347726981|gb|AEP19849.1| multifunctional SOS repair factor [Exiguobacterium sp. EPVM]
gi|347727028|gb|AEP19872.1| multifunctional SOS repair factor [Exiguobacterium sp. 11-28]
Length = 349
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+ A+ I FGKGS+ RLG V PSG + LD+ALG GG P+GR++E+
Sbjct: 3 DRKQALEMALRQIEKQFGKGSIMRLGENTDQQVSVTPSGSIALDIALGAGGYPRGRVIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A VDAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKRGGQAAFVDAEHALDPKYAQNLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGATNK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIG+ +GNPE T GG ALKF++SVRLE+R +K +G + VG R
Sbjct: 183 SKTIVIFINQIREKIGIMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGQDMVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+K++ P+K AE +I++GEG+S+ G ++D +DIV + GAWYSY ++RLGQGR
Sbjct: 241 KIKVVKNKIAPPFKTAEVDIMYGEGISREGELIDIGADLDIVQKSGAWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QY+++NP + +E+ +R
Sbjct: 301 ENAKQYMKENPSVAASVEERIR 322
>gi|289768695|ref|ZP_06528073.1| RecA protein [Streptomyces lividans TK24]
gi|1350565|sp|P48294.1|RECA_STRLI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|416193|emb|CAA53674.1| reca peptidase [Streptomyces lividans TK24]
gi|289698894|gb|EFD66323.1| RecA protein [Streptomyces lividans TK24]
gi|744164|prf||2014251A recA peptidase
Length = 374
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/332 (55%), Positives = 247/332 (74%), Gaps = 6/332 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GG+P+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRTNEPIEVIPTGSTALDVALGVGGIPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVH 419
++ A +L+DNP L EIEK ++ + G VH
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKQKLGVG-VH 332
>gi|46200836|ref|ZP_00056375.2| COG0468: RecA/RadA recombinase [Magnetospirillum magnetotacticum
MS-1]
Length = 351
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 246/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
D +DRQ+AL+AA++ I +FGKGS+ +LG + E +G L LD+ALG GG+P+
Sbjct: 2 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 61
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+E++GPESSGKTTLALH IAE QK GG VDAEHA DPSY++ LGV ++ L++ Q
Sbjct: 62 GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVALDELLISQ 121
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEIAD + RSGA+D++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK+
Sbjct: 122 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 181
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G+ SK+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVR+EIR G IK DE
Sbjct: 182 TGSVSKSKTIVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMEIRRVGAIKDR--DE 239
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+K +F+I++GEG+SK+G ++D ++V + GAW+SY
Sbjct: 240 VVGNQTRVKVVKNKLAPPFKVVDFDIMYGEGISKMGELIDLGVKANVVEKSGAWFSYNST 299
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A Q+LRDNP + EIE +R
Sbjct: 300 RIGQGRENAKQFLRDNPAMAAEIEGAIR 327
>gi|90020935|ref|YP_526762.1| recombinase A [Saccharophagus degradans 2-40]
gi|123277374|sp|Q21L79.1|RECA_SACD2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|89950535|gb|ABD80550.1| recA protein [Saccharophagus degradans 2-40]
Length = 348
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL+AA++ I+ FGKG+V RLG G + +G L LD+ALG GGLPKGRIVEI+
Sbjct: 5 KSKALEAALSQIDRQFGKGTVMRLGDKGREKMPAISTGSLGLDVALGIGGLPKGRIVEIY 64
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL L IAE Q+ GG VDAEHA DP Y++ LGV+V++LI+ QPDNGE A
Sbjct: 65 GPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNGEQA 124
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LE+AD + RSGA+D++ VDSV+ALTP+AEIEG++G +GLQARLMSQALRK++GN A
Sbjct: 125 LEVADMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNIKNA 184
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
C IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR G +K +GDE VG R
Sbjct: 185 NCLAIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSVK--EGDEVVGSDTR 242
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P+KQAEF+I++G+G+++LG ++D + ++ + GAWYSY ++GQG+
Sbjct: 243 VKVVKNKVAPPFKQAEFQILYGQGINRLGEIVDFGVKLGLIDKAGAWYSYNGDKIGQGKA 302
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
A+QYLRDN + E +E+ +++
Sbjct: 303 NAMQYLRDNKEVAEFLEQKIKA 324
>gi|395767195|ref|ZP_10447730.1| protein recA [Bartonella doshiae NCTC 12862]
gi|395414508|gb|EJF80950.1| protein recA [Bartonella doshiae NCTC 12862]
Length = 347
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/312 (59%), Positives = 242/312 (77%), Gaps = 4/312 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK+GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDAIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDN 398
GR+ A Q+LR++
Sbjct: 299 GRENAKQFLREH 310
>gi|335429613|ref|ZP_08556511.1| RecA/RadA recombinase (multifunctional SOS repair regulator)
[Haloplasma contractile SSD-17B]
gi|334889623|gb|EGM27908.1| RecA/RadA recombinase (multifunctional SOS repair regulator)
[Haloplasma contractile SSD-17B]
Length = 350
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/326 (53%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R++AL +A+ I FGKG++ +LG + SG + LD ALG GG PKGRI+EI
Sbjct: 4 NREKALGSALKQIEKQFGKGAIMKLGGQANRKISAISSGSIALDSALGVGGYPKGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT ALHA+AEVQK GGNA +DAEHA DP Y++ LGVD++ L++ QPD GE
Sbjct: 64 YGPESSGKTTFALHALAEVQKSGGNAAFIDAEHAVDPEYARNLGVDIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID++ +DSV+AL PRAEIEGE+G +GLQARLMSQA+RK++G S+
Sbjct: 124 ALEIAEALVRSGAIDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQAMRKLAGAISQ 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C IF+NQIR K+G+ +GNPE T GG ALKF++SVR+EIR +K +G + +G +
Sbjct: 184 VNCIAIFINQIREKVGIMFGNPETTPGGRALKFYSSVRVEIRRGETLK--QGTDILGNKA 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQ E +I++GEG+SK G +LD DI+ + G+WYSY ++++GQGR
Sbjct: 242 RVKIVKNKVAPPFKQVEIDIMYGEGISKEGEILDLGVEHDIIGKAGSWYSYNNEKIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A Q+LRDNPL+++E+E+ +R ++
Sbjct: 302 ENAKQFLRDNPLIKDEVERAIRKSLN 327
>gi|308235288|ref|ZP_07666025.1| recombinase A [Gardnerella vaginalis ATCC 14018 = JCM 11026]
gi|311114751|ref|YP_003985972.1| recombination protein A [Gardnerella vaginalis ATCC 14019]
gi|385801646|ref|YP_005838049.1| recombinase A [Gardnerella vaginalis HMP9231]
gi|415703533|ref|ZP_11459349.1| recombinase A [Gardnerella vaginalis 284V]
gi|415705230|ref|ZP_11460501.1| recombinase A [Gardnerella vaginalis 75712]
gi|415707166|ref|ZP_11462013.1| recombinase A [Gardnerella vaginalis 0288E]
gi|417556770|ref|ZP_12207827.1| RecA protein [Gardnerella vaginalis 315-A]
gi|310946245|gb|ADP38949.1| recombination protein A [Gardnerella vaginalis ATCC 14019]
gi|333394045|gb|AEF31963.1| RecA protein [Gardnerella vaginalis HMP9231]
gi|333602458|gb|EGL13888.1| RecA protein [Gardnerella vaginalis 315-A]
gi|388051952|gb|EIK74976.1| recombinase A [Gardnerella vaginalis 75712]
gi|388052573|gb|EIK75595.1| recombinase A [Gardnerella vaginalis 284V]
gi|388054166|gb|EIK77111.1| recombinase A [Gardnerella vaginalis 0288E]
Length = 384
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/333 (53%), Positives = 248/333 (74%), Gaps = 6/333 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R R+ AL+ A+ ++ +GKGS RLG VE P+G + LD+ALG
Sbjct: 14 IDADKADPR---RKAALETALANVEKQYGKGSAMRLGDKPLQDVEVIPTGSIALDMALGI 70
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++
Sbjct: 71 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGIAAFIDAEHALDPVYARKLGVDTDS 130
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 131 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 190
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF++SVR++IR IK+
Sbjct: 191 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYSSVRMDIRRVSTIKN 250
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
G+E VG R +V++ K+K++ P+K AEF++++GEG+S G ++D A D++ + G+W+
Sbjct: 251 --GEEAVGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMAVQCDVIKKSGSWF 308
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
+Y ++LGQGR+ Q+L+DNP + EEI V+
Sbjct: 309 TYEGEQLGQGRENVRQFLKDNPAITEEISDKVK 341
>gi|238063453|ref|ZP_04608162.1| recA protein [Micromonospora sp. ATCC 39149]
gi|237885264|gb|EEP74092.1| recA protein [Micromonospora sp. ATCC 39149]
Length = 348
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/320 (57%), Positives = 244/320 (76%), Gaps = 5/320 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I+ FGKGSV RLG P+G + LD+ALG GGLP+GR+VEI
Sbjct: 6 DREKALDLALAQIDKQFGKGSVMRLGERPVVQTSVIPTGSIALDVALGVGGLPRGRVVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y+KALGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKALGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 126 ALEIADMLVRSGAIDIVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGVLNN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+S+K G + VG R
Sbjct: 186 TGTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDVR---RIESLKDGTDVVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAAPFKQAEFDIMYGKGISREGSLIDVGVEQAIIRKSGAWYTYDGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEK 407
++KA ++LR+NP + EIEK
Sbjct: 303 KEKAREFLRENPDVAAEIEK 322
>gi|389805851|ref|ZP_10202998.1| recombinase A [Rhodanobacter thiooxydans LCS2]
gi|388447092|gb|EIM03106.1| recombinase A [Rhodanobacter thiooxydans LCS2]
Length = 345
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 244/325 (75%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL +A+ I FGKG+V R+G VET +G L LD+ALG GGLP+GR+VEI
Sbjct: 4 NKRKALTSALGQIEKQFGKGAVMRMGDRVNEPVETVSTGSLGLDIALGVGGLPRGRVVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA Q+ GG A +DAEHA DPSY++ LGV V++L+V QPD GE
Sbjct: 64 YGPESSGKTTMTLQAIANCQRAGGTAAFIDAEHALDPSYAEKLGVKVDDLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ VDSV+ALTP+AEIEGE+G +GL ARLMSQALRK++ N K
Sbjct: 124 ALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHARLMSQALRKLTANIKK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+GC +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K KGDE +G
Sbjct: 184 SGCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--KGDEIIGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P++Q EFEI++GEG S+ G +++ +++ + GAWYSY R+GQG+
Sbjct: 242 RVKVVKNKVAPPFRQCEFEILYGEGTSREGEIIELGVAQNLIDKSGAWYSYNGDRIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ Q+LRDNP + EI+K +R +
Sbjct: 302 ENVRQFLRDNPAIANEIDKQLRERL 326
>gi|145593972|ref|YP_001158269.1| recombinase A [Salinispora tropica CNB-440]
gi|189039606|sp|A4X4U1.1|RECA_SALTO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|145303309|gb|ABP53891.1| recA protein [Salinispora tropica CNB-440]
Length = 348
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/320 (57%), Positives = 244/320 (76%), Gaps = 5/320 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+RALD A+ I+ FGKGSV RLG P+G + LD+ALG GGLP+GR++E+
Sbjct: 6 DRERALDLALAQIDKQFGKGSVMRLGERPVVETAVVPTGSIALDVALGVGGLPRGRVIEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A VDAEHA DP Y++ALGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQRSGGIAAFVDAEHALDPEYARALGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+G S
Sbjct: 126 ALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGVLSH 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T +F+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+S+K G + VG R
Sbjct: 186 TGTTAVFINQLREKIGVMFGSPETTTGGRALKFYASVRLDVR---RIESLKDGTDVVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAAPFKQAEFDIMYGKGISREGSLIDVGVEQAIIRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEK 407
++KA ++LR+NP + EIEK
Sbjct: 303 KEKAREFLRENPDVAAEIEK 322
>gi|375101879|ref|ZP_09748142.1| protein RecA [Saccharomonospora cyanea NA-134]
gi|374662611|gb|EHR62489.1| protein RecA [Saccharomonospora cyanea NA-134]
Length = 345
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 248/330 (75%), Gaps = 5/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALD A+ I+ FGKGSV RLG VE P+G + LD+ALG GGLP+GR+VEI
Sbjct: 6 DKGKALDLALAQIDKQFGKGSVMRLGEDSRPPVEVIPTGAIALDIALGIGGLPRGRVVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+KALGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKALGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 126 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALHN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 186 SGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGGEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G GVS+ G ++D IV + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDILYGVGVSREGSLIDMGVDQGIVRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++ A ++LR+NP + EIEK ++ + G+
Sbjct: 303 KENARRFLRENPDVANEIEKKIKEKLGIGA 332
>gi|381397036|ref|ZP_09922450.1| Protein recA [Microbacterium laevaniformans OR221]
gi|380775995|gb|EIC09285.1| Protein recA [Microbacterium laevaniformans OR221]
Length = 351
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 250/329 (75%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL++A+ I+ FGKGSV RLGS A VE P+G + LD+ALG GGLP+GRI+EI
Sbjct: 6 DREKALESALAQIDRQFGKGSVMRLGSDDRAPVEVIPTGSIALDVALGVGGLPRGRIIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHAIA VQ+ GG A +DAEHA DP Y++ LGVD++ L+V QPD GE
Sbjct: 66 YGPESSGKTTLTLHAIANVQRAGGIAAFIDAEHALDPDYAQKLGVDIDQLLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDL+ +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G ++
Sbjct: 126 ALEIADMLVRSGAIDLVVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGGLNQ 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
T+IF+NQ+R KIGV++G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 186 TNTTMIFINQLREKIGVFFGSPETTAGGKALKFYASVRLDIR---RIETLKDGTDAVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D +V + GAWY+Y ++LGQG
Sbjct: 243 TRVKVVKNKMAPPFKQAEFDILYGTGISREGSLIDFGVEHALVKKSGAWYTYDGEQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L NP + EIE ++ + G
Sbjct: 303 KENARNFLLKNPDIAAEIETKIKQKLGIG 331
>gi|415727111|ref|ZP_11471339.1| recombinase A [Gardnerella vaginalis 00703Dmash]
gi|388062840|gb|EIK85445.1| recombinase A [Gardnerella vaginalis 00703Dmash]
Length = 380
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/336 (52%), Positives = 248/336 (73%), Gaps = 6/336 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R RQ AL+ A+ ++ +GKGS RLG VE P+G + LD ALG
Sbjct: 15 IDADKADPR---RQAALETALANVERQYGKGSAMRLGDRPMQDVEVIPTGSIALDTALGI 71
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD +
Sbjct: 72 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDA 131
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 132 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 191
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR++IR IK
Sbjct: 192 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRMDIRRVSTIK- 250
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
+G+E +G R +V++ K+K++ P+K AEF++++GEG+S G ++D D++ + G+W+
Sbjct: 251 -EGEEAIGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQADVIKKSGSWF 309
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMM 413
+Y ++LGQGR+ ++L+DNP + EEI + +++ +
Sbjct: 310 TYEGEQLGQGRENVRKFLKDNPAITEEISEKIKAAL 345
>gi|269956042|ref|YP_003325831.1| recA protein [Xylanimonas cellulosilytica DSM 15894]
gi|269304723|gb|ACZ30273.1| recA protein [Xylanimonas cellulosilytica DSM 15894]
Length = 376
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 251/329 (76%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+AA+ I+ SFGKGSV RLG A VE P+G + LD+ALG GGLP+GR++EI
Sbjct: 6 DREKALEAALAQIDRSFGKGSVMRLGEETRAPVEVIPTGSIALDVALGIGGLPRGRVIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVASAQRAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 126 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALNS 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G + IF+NQ+R KIGV++G+PE T+GG ALKF+ASVRL+IR +I+++K G E VG R
Sbjct: 186 SGTSAIFINQLREKIGVFFGSPETTTGGKALKFYASVRLDIR---RIETLKEGTEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D +V + G+W++Y +LGQG
Sbjct: 243 TRVKVVKNKMAPPFKQAEFDILYGVGISREGGLIDMGVEHGLVRKSGSWFTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +LRDNP L EIEK ++ + G
Sbjct: 303 KENARGFLRDNPDLANEIEKRIKEKLGVG 331
>gi|386382731|ref|ZP_10068324.1| recombinase A [Streptomyces tsukubaensis NRRL18488]
gi|385669842|gb|EIF92992.1| recombinase A [Streptomyces tsukubaensis NRRL18488]
Length = 374
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 246/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG+ VDAEHA DP Y+K LGVD+++LI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGSVAFVDAEHALDPEYAKKLGVDIDSLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|456387681|gb|EMF53171.1| recA protein [Streptomyces bottropensis ATCC 25435]
Length = 378
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR++E+
Sbjct: 8 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVIEV 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+ GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 68 YGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 128 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 188 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 245 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 305 KENARNFLKDNPDLANEIEKKIKEKLGVG 333
>gi|148260042|ref|YP_001234169.1| recombinase A [Acidiphilium cryptum JF-5]
gi|326403005|ref|YP_004283086.1| recombinase A [Acidiphilium multivorum AIU301]
gi|338988950|ref|ZP_08633843.1| Protein recA [Acidiphilium sp. PM]
gi|189039588|sp|A5FXB8.1|RECA_ACICJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|146401723|gb|ABQ30250.1| recA protein [Acidiphilium cryptum JF-5]
gi|325049866|dbj|BAJ80204.1| recombinase A [Acidiphilium multivorum AIU301]
gi|338206126|gb|EGO94369.1| Protein recA [Acidiphilium sp. PM]
Length = 343
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 247/325 (76%), Gaps = 4/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++ +ALDAA+ I +FGKGS+ R+GS + ++ +G L LDLALG GGLP+GR++
Sbjct: 1 MEKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVI 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHA+AE QK GG VDAEHA DP Y++ LGVDV+NL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK++G+
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IFLNQIR KIGV +GNPE T+GG ALKF+AS+R++IR G IK +E G
Sbjct: 181 SRSKTLVIFLNQIRLKIGVMFGNPETTTGGNALKFYASIRMDIRRIGSIKDR--EEVTGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P++Q EF+I++GEG+SK+G +LD IV + GAW+S QR+GQ
Sbjct: 239 QTRVKVVKNKLAPPFRQVEFDIMYGEGISKVGELLDLGVKAGIVEKSGAWFSCDSQRIGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS 411
GR+ A Q+LRDNP + IE+ +R+
Sbjct: 299 GRENAKQFLRDNPDVAASIEQRIRA 323
>gi|345868223|ref|ZP_08820217.1| protein RecA [Bizionia argentinensis JUB59]
gi|344047437|gb|EGV43067.1| protein RecA [Bizionia argentinensis JUB59]
Length = 333
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/322 (54%), Positives = 247/322 (76%), Gaps = 2/322 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL ++ ++ ++GKG+V ++ VE+ SG L LD+ALG G P+GR++EI+GP
Sbjct: 10 KALQLTLDKLDKAYGKGTVMKMSDQAVVDVESISSGSLGLDIALGVNGYPRGRVIEIYGP 69
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTL LHAIAE QK GG A +DAEHAFD +Y++ LG+D++NLI+ QPDNGE ALE
Sbjct: 70 ESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRTYAEKLGIDIDNLIISQPDNGEQALE 129
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD + RSGAID++ +DSV+ALTP+AEIEGE+G ++GL ARLMSQALRK++ + SK C
Sbjct: 130 IADNLIRSGAIDIVVIDSVAALTPKAEIEGEMGDSKMGLHARLMSQALRKLTASISKTNC 189
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
T+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G+ G + RV+
Sbjct: 190 TVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDTDGNVQ-GNKTRVK 248
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+KV+ P++ AEF+I++GEG+SK+G +LD A ++V + G+W+SYGD +LGQGRD
Sbjct: 249 VVKNKVAPPFRLAEFDIMYGEGISKVGEILDIAVEYEVVKKAGSWFSYGDTKLGQGRDAV 308
Query: 392 LQYLRDNPLLQEEIEKVVRSMM 413
++DNP L +E+E ++ ++
Sbjct: 309 KALIKDNPELMDELETKIKELI 330
>gi|402495893|ref|ZP_10842611.1| recombinase A [Aquimarina agarilytica ZC1]
Length = 340
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/320 (55%), Positives = 246/320 (76%), Gaps = 2/320 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL+ + ++ ++GKG+V ++G A V+T +G L LDLALG GGLP+GR++EIF
Sbjct: 10 KLKALELTLAKLDKAYGKGAVMKMGDAAIVEVDTISTGSLGLDLALGVGGLPRGRVIEIF 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVD+ENL++ QPDNGE A
Sbjct: 70 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAQKLGVDIENLVISQPDNGEQA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ +K
Sbjct: 130 LEITDNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTSTINKT 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G E +G + R
Sbjct: 190 NCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDSNG-EVMGNKTR 248
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I++G+GVSK+G ++D +IV + G+W+SY D +LGQGRD
Sbjct: 249 VKVVKNKVAPPFRTAEFDIMYGQGVSKVGEIIDIGVDYEIVKKSGSWFSYMDSKLGQGRD 308
Query: 390 KALQYLRDNPLLQEEIEKVV 409
+ L DNP L EE+E+ +
Sbjct: 309 AVKKLLLDNPELMEELEEKI 328
>gi|291550041|emb|CBL26303.1| protein RecA [Ruminococcus torques L2-14]
Length = 379
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/324 (54%), Positives = 252/324 (77%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++ALDAA+ + FGKG+V RLG +G + VET P+GCL+LDLALG GG+PKGR++E
Sbjct: 15 EKKKALDAAIAKLEKDFGKGAVMRLGESGAHVAVETVPTGCLSLDLALGLGGVPKGRVIE 74
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH I+EVQK GG A +DAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 75 VYGPESSGKTTVALHMISEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDELYISQPDSGD 134
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ M RSGAID+I +DSV+AL P+ EIEG++G +GLQARLMSQALRK++ S
Sbjct: 135 QALEIAETMVRSGAIDIIVIDSVAALVPKQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 194
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R +K + E VG R
Sbjct: 195 KSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYASVRMDVRRIETLK--QSGEMVGNR 252
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R+R+ K+K++ P+K+AEF+I+FG+G+S+ G +LD A +D+V + GAWY+Y +++GQG
Sbjct: 253 TRIRIVKNKIAPPFKEAEFDIMFGKGISRAGDILDLATNIDLVKKSGAWYAYEGEKIGQG 312
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL +P + E +++ VR+
Sbjct: 313 RENAKAYLESHPEVMETLDQKVRA 336
>gi|407476870|ref|YP_006790747.1| recA protein [Exiguobacterium antarcticum B7]
gi|407060949|gb|AFS70139.1| recA protein [Exiguobacterium antarcticum B7]
Length = 347
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/322 (54%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ RLG V SG +TLD+ALG GG P+GR++E+
Sbjct: 3 DRKAALEMALRQIEKQFGKGSIMRLGENADQRVSVISSGSITLDIALGAGGYPRGRVIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP+Y+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPAYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGATNK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIGV +GNPE T GG ALKF++SVRLE+R +K+ G + VG R
Sbjct: 183 SKTIVIFINQIREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAEALKN--GTDIVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+K++ P+KQAE +I++G+G+SK G ++D +DIV + GAWYSY +RLGQGR
Sbjct: 241 KLKVVKNKIAPPFKQAEVDIMYGQGISKFGELIDLGTDLDIVQKSGAWYSYNSERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QY+ ++P + +E+E+++R
Sbjct: 301 ENAKQYMIEHPEVADEVERLIR 322
>gi|381162590|ref|ZP_09871820.1| protein RecA [Saccharomonospora azurea NA-128]
gi|379254495|gb|EHY88421.1| protein RecA [Saccharomonospora azurea NA-128]
Length = 345
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 248/330 (75%), Gaps = 5/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALD A+ I+ FGKGSV RLG VE P+G + LD+ALG GGLP+GRIVEI
Sbjct: 6 DKGKALDLALAQIDKQFGKGSVMRLGEDTRPPVEVIPTGAIALDIALGIGGLPRGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+KALGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGVAAFIDAEHALDPEYAKALGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 126 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALHN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R K+GV +G+PE T+GG ALKF++SVRL++R +I+++K G E VG R
Sbjct: 186 SGTTAIFINQLREKVGVMFGSPETTTGGKALKFYSSVRLDVR---RIETLKDGGEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G GVS+ G ++D IV + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDILYGVGVSREGSLIDMGVDQAIVRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++ A ++LR+NP + EIEK ++ + G+
Sbjct: 303 KENARRFLRENPDVANEIEKKIKEKLGIGA 332
>gi|374307593|ref|YP_005054024.1| recombinase A [Filifactor alocis ATCC 35896]
gi|291166395|gb|EFE28441.1| RecA protein [Filifactor alocis ATCC 35896]
Length = 378
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/338 (53%), Positives = 248/338 (73%), Gaps = 3/338 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R++ LDA ++ I FGKG+V LG +ET +G L LDLA+G GGLPKGRI+EI
Sbjct: 20 ERKKVLDATISKIERDFGKGAVMMLGDNIDMNIETISTGSLGLDLAIGVGGLPKGRIIEI 79
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AE QK GG A +DAEHA DP Y+KALGVD++NLI+ QPDNGE
Sbjct: 80 YGPESSGKTTVALHAVAEAQKAGGLAAFIDAEHAMDPVYAKALGVDIDNLIISQPDNGEQ 139
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + +SG ID++ +DSV+AL PR+EIEG++G +GLQARLMSQALRK++ + ++
Sbjct: 140 ALEIAESLVKSGVIDILVIDSVAALVPRSEIEGDMGDSHVGLQARLMSQALRKLTASTNR 199
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+IF+NQ+R KIGV +GNPE T+GG ALKF++++RL+IR IK K D VG R
Sbjct: 200 FKTVIIFINQLREKIGVMFGNPETTTGGRALKFYSTLRLDIRKFDTIK--KNDVVVGNRT 257
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P++QAEF+I++GEG+S+ G ++D A I+ + G+WYSY D ++GQGR
Sbjct: 258 RVKVVKNKVAPPFRQAEFDIMYGEGISRAGEIVDIASQYGIIEKAGSWYSYNDMKIGQGR 317
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRN 426
+ Q+L DN + EEIE VR + V + + +
Sbjct: 318 ENVKQFLLDNQEMMEEIEGQVRRTLLKSHVSENDLIED 355
>gi|418459594|ref|ZP_13030709.1| protein RecA [Saccharomonospora azurea SZMC 14600]
gi|359740276|gb|EHK89121.1| protein RecA [Saccharomonospora azurea SZMC 14600]
Length = 345
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 248/330 (75%), Gaps = 5/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALD A+ I+ FGKGSV RLG VE P+G + LD+ALG GGLP+GRIVEI
Sbjct: 6 DKGKALDLALAQIDKQFGKGSVMRLGEDTRPPVEVIPTGAIALDIALGIGGLPRGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+KALGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKALGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 126 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALHN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R K+GV +G+PE T+GG ALKF++SVRL++R +I+++K G E VG R
Sbjct: 186 SGTTAIFINQLREKVGVMFGSPETTTGGKALKFYSSVRLDVR---RIETLKDGGEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G GVS+ G ++D IV + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDILYGVGVSREGSLIDMGVDQAIVRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++ A ++LR+NP + EIEK ++ + G+
Sbjct: 303 KENARRFLRENPDVANEIEKKIKEKLGIGA 332
>gi|390451215|ref|ZP_10236794.1| recombinase A [Nitratireductor aquibiodomus RA22]
gi|389661356|gb|EIM72975.1| recombinase A [Nitratireductor aquibiodomus RA22]
Length = 361
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG+ + +ET +G L LD+ALG GGLP+GRI+
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D+I VDSV+ALTPRAEIEGE+G G+QARLMSQALRK++ +
Sbjct: 134 EQALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G +K DE VG
Sbjct: 194 SRSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGSVKDR--DEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ R++V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 252 QTRIKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L DNP +EIE +R
Sbjct: 312 GRENAKQFLHDNPEAAQEIELALR 335
>gi|366090358|ref|ZP_09456724.1| recombinase A [Lactobacillus acidipiscis KCTC 13900]
Length = 367
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 241/322 (74%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ ALDAA+ I +FGKGS+ R+G + T PSG L LD ALG GG P+GRIVEI
Sbjct: 5 ERQAALDAALKKIEKNFGKGSIMRMGDKADTQISTIPSGSLALDEALGVGGYPRGRIVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AEVQ GG A +DAE+A DP Y+ ALGV+++ L++ QPD GE
Sbjct: 65 YGPESSGKTTVALHAVAEVQAQGGTAAYIDAENALDPVYASALGVNIDELLLSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 125 GLEIADALVSSGAVDIVVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGTINK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPE T GG ALKF+A++RLEIR +IK G + VG RV
Sbjct: 185 TKTIALFINQIREKVGVMFGNPETTPGGRALKFYATIRLEIRRAEQIKD--GSDIVGNRV 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+++AE +I++GEG+SK G ++D A DIV + G+W+SYG++R+GQGR
Sbjct: 243 RIKVVKNKVAPPFRKAEVDIMYGEGISKSGELIDMAVEKDIVHKSGSWFSYGEERIGQGR 302
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A +Y+ D+P + E+ VR
Sbjct: 303 ENAKKYMADHPEMMNEVTTKVR 324
>gi|290956979|ref|YP_003488161.1| DNA recombinase A [Streptomyces scabiei 87.22]
gi|260646505|emb|CBG69602.1| DNA recombinase A [Streptomyces scabiei 87.22]
Length = 375
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR++E+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVIEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+ GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|399524213|ref|ZP_10764781.1| RecA protein [Atopobium sp. ICM58]
gi|398374655|gb|EJN52233.1| RecA protein [Atopobium sp. ICM58]
Length = 363
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+ A++ I+ FGKGSV RLG V+ P+G L LD+ALG GGLP+GR++E+
Sbjct: 15 DRNKALEVALSQIDKQFGKGSVMRLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVIEV 74
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ALGVD ++L+V QPD GE
Sbjct: 75 YGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTGEQ 134
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 135 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 194
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR+++R +K + VG R
Sbjct: 195 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDVRRIETLK--EAGSPVGNRT 252
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R +V K+K++ P+KQAEF+I++G+G+S+ G ++D IV + G+W++YGD +LGQG+
Sbjct: 253 RAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGIVRKSGSWFTYGDDQLGQGK 312
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
+ Q+L DNP L EIE +
Sbjct: 313 ENVRQFLVDNPELANEIENKI 333
>gi|415717489|ref|ZP_11466852.1| recombinase A [Gardnerella vaginalis 1500E]
gi|388060836|gb|EIK83511.1| recombinase A [Gardnerella vaginalis 1500E]
Length = 380
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/336 (52%), Positives = 248/336 (73%), Gaps = 6/336 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R RQ AL+ A+ ++ +GKGS RLG VE P+G + LD ALG
Sbjct: 15 IDADKADPR---RQAALETALANVERQYGKGSAMRLGDRPMQDVEVIPTGSIALDTALGI 71
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD +
Sbjct: 72 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDA 131
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 132 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 191
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR++IR IK
Sbjct: 192 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRMDIRRVSTIK- 250
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
+G+E +G R +V++ K+K++ P+K AEF++++GEG+S G ++D D++ + G+W+
Sbjct: 251 -EGEEAIGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQADVIKKSGSWF 309
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMM 413
+Y ++LGQGR+ ++L+DNP + EEI + +++ +
Sbjct: 310 TYEGEQLGQGRENVRKFLKDNPAITEEISEKIKAAL 345
>gi|375096415|ref|ZP_09742680.1| protein RecA [Saccharomonospora marina XMU15]
gi|374657148|gb|EHR51981.1| protein RecA [Saccharomonospora marina XMU15]
Length = 346
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 248/330 (75%), Gaps = 5/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALD A+ I+ FGKGSV RLG +E P+G + LD+ALG GGLP+GR+VE+
Sbjct: 6 DKGKALDLALAQIDKQFGKGSVMRLGEETRPPIEVIPTGAIALDIALGIGGLPRGRVVEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+KALGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKALGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 126 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALHN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 186 SGTTAIFINQLREKVGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGGEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G GVS+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDILYGIGVSREGSLIDMGVDQGILRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++ A ++LRDNP + EIEK ++ + G+
Sbjct: 303 KENARRFLRDNPDIANEIEKRIKEKLGIGA 332
>gi|222151124|ref|YP_002560278.1| recombinase A [Macrococcus caseolyticus JCSC5402]
gi|254790437|sp|B9EBH1.1|RECA_MACCJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|222120247|dbj|BAH17582.1| recombinase RecA [Macrococcus caseolyticus JCSC5402]
Length = 353
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 248/329 (75%), Gaps = 3/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ+ALD + ++ SFGKG+V +LG V T SG +TLD ALG GG PKGRI+EI
Sbjct: 3 ERQKALDTVIKNMEKSFGKGAVMKLGDRTDRNVSTVSSGSITLDSALGVGGYPKGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y+K LGVD+ENL + QPD+GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQRQGGVAAFIDAEHALDPVYAKNLGVDIENLYLSQPDHGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D+I VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG+ SK
Sbjct: 123 GLEIAEAFVRSGAVDIIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLSGSVSK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R KIGV +GNPE T GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 183 SNTIAIFINQVREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+S+ G ++D +++ + GAWYSY +R+GQGR
Sbjct: 241 KIKVVKNKVAPPFKVAEVDIMYGKGISREGEIVDLGAEYEVLQKSGAWYSYDGERIGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ YL++NP +++EI++ +R M G+
Sbjct: 301 ENIKTYLKENPEVRDEIDQKIRKAMGVGA 329
>gi|297191664|ref|ZP_06909062.1| recombinase A [Streptomyces pristinaespiralis ATCC 25486]
gi|197721599|gb|EDY65507.1| recombinase A [Streptomyces pristinaespiralis ATCC 25486]
Length = 375
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGAVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|226322616|ref|ZP_03798134.1| hypothetical protein COPCOM_00388 [Coprococcus comes ATCC 27758]
gi|225208953|gb|EEG91307.1| RecA protein [Coprococcus comes ATCC 27758]
Length = 375
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 253/330 (76%), Gaps = 4/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++++ALDAA+ + FGKG+V +LG A VET P+G L+LDLALG GG+PKGRI+E
Sbjct: 24 NKKKALDAAIAKLEKDFGKGAVMKLGDPAAQVHVETVPTGSLSLDLALGVGGVPKGRIIE 83
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAEVQK GG A +DAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 84 IYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDELYISQPDSGD 143
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGAID+I VDSV+AL P+ EIEG++G +GLQARLMSQALRK++ S
Sbjct: 144 QALEITETMVRSGAIDIIVVDSVAALVPKQEIEGDMGDTHVGLQARLMSQALRKLTPVIS 203
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF++SVR+++R T +K +G E VG
Sbjct: 204 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRMDVRRTETLK--QGGEMVGNH 261
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VRV++ K+K++ P+K+AEF+I+FG+G+S+ G +LD A +D+V + GAWY+Y +++GQG
Sbjct: 262 VRVKIVKNKIAPPFKEAEFDIMFGKGISREGDILDLATKIDLVNKSGAWYAYNGEKIGQG 321
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
R+ A YL +P + EEIE+ VR+ G+
Sbjct: 322 RENAKSYLTAHPEIMEEIEEKVRAHYGIGA 351
>gi|407777783|ref|ZP_11125051.1| recombinase A [Nitratireductor pacificus pht-3B]
gi|407300583|gb|EKF19707.1| recombinase A [Nitratireductor pacificus pht-3B]
Length = 360
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG+ + +ET +G L LD+ALG GGLP+GRI+
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTT+ALH +AE QK GG +DAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTMALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D+I VDSV+ALTPRAEIEGE+G G+QARLMSQALRK++ +
Sbjct: 134 EQALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K +E VG
Sbjct: 194 SRSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDR--EETVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ R++V K+K++ P+KQ EF+I++GEGVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRIKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LRDNP EIE +R
Sbjct: 312 GRENAKQFLRDNPETAGEIELTLR 335
>gi|415729569|ref|ZP_11472595.1| recombinase A [Gardnerella vaginalis 6119V5]
gi|388064603|gb|EIK87137.1| recombinase A [Gardnerella vaginalis 6119V5]
Length = 380
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/336 (52%), Positives = 248/336 (73%), Gaps = 6/336 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R RQ AL+ A+ ++ +GKGS RLG VE P+G + LD ALG
Sbjct: 15 IDADKADPR---RQAALETALANVERQYGKGSAMRLGDRPMQDVEVIPTGSIALDTALGI 71
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD +
Sbjct: 72 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDA 131
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 132 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 191
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR++IR IK
Sbjct: 192 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRMDIRRVSTIK- 250
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
+G+E +G R +V++ K+K++ P+K AEF++++GEG+S G ++D D++ + G+W+
Sbjct: 251 -EGEEAIGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQADVIKKSGSWF 309
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMM 413
+Y ++LGQGR+ ++L+DNP + EEI + +++ +
Sbjct: 310 TYEGEQLGQGRENVRKFLKDNPAITEEISEKIKAAL 345
>gi|5103048|dbj|BAA78779.1| RecA protein [Rhodopseudomonas palustris]
Length = 363
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV +LG A+ +ET SG L LD+ALG GGLPKGRIV
Sbjct: 15 MDKSKALSAALSQIERQFGKGSVMKLGKNDRAMEIETISSGSLGLDIALGVGGLPKGRIV 74
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV+V++L++ QPD+G
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 134
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK + DE +G
Sbjct: 195 NKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--ERDEVIGN 252
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD IV + GAW+SY QRLGQ
Sbjct: 253 QTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQ 312
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR NP + +IE +R
Sbjct: 313 GRENAKSFLRSNPDMTAKIEAAIR 336
>gi|444299288|emb|CCP29593.1| recombinase A, partial [Agrobacterium fabrum]
Length = 321
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/322 (58%), Positives = 245/322 (76%), Gaps = 4/322 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+++L++ QPD GE
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 120
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ +DSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + SK
Sbjct: 121 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG +
Sbjct: 181 SKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGNQT 238
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQGR
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A +LRDNP EIE +R
Sbjct: 299 ENAKTFLRDNPDTANEIELALR 320
>gi|1172888|sp|P24543.2|RECA_RHIET RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|683661|emb|CAA44346.1| RecA [Rhizobium phaseoli]
Length = 361
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 247/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQG + A +LRDNP L EIE +R
Sbjct: 308 RLGQGGENAKTFLRDNPDLAREIELALR 335
>gi|302866030|ref|YP_003834667.1| recA protein [Micromonospora aurantiaca ATCC 27029]
gi|315502590|ref|YP_004081477.1| reca protein [Micromonospora sp. L5]
gi|302568889|gb|ADL45091.1| recA protein [Micromonospora aurantiaca ATCC 27029]
gi|315409209|gb|ADU07326.1| recA protein [Micromonospora sp. L5]
Length = 349
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/320 (57%), Positives = 244/320 (76%), Gaps = 5/320 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I+ FGKGSV RLG P+G + LD+ALG GGLP+GR+VEI
Sbjct: 6 DREKALDLALAQIDKQFGKGSVMRLGERPVVQTAVIPTGSIALDVALGVGGLPRGRVVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y++ALGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYARALGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 126 ALEIADMLVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGVLNN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+S+K G + VG R
Sbjct: 186 TGTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDVR---RIESLKDGTDVVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAAPFKQAEFDIMYGKGISREGSLIDVGVEQAIIRKSGAWYTYDGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEK 407
++KA ++LR+NP + EIEK
Sbjct: 303 KEKAREFLRENPDVAAEIEK 322
>gi|291301648|ref|YP_003512926.1| recA protein [Stackebrandtia nassauensis DSM 44728]
gi|290570868|gb|ADD43833.1| recA protein [Stackebrandtia nassauensis DSM 44728]
Length = 349
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/334 (55%), Positives = 249/334 (74%), Gaps = 5/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALD A+ I+ FGKGSV +LG ++ P+G + LD+ALG GGLP+GRI+EI
Sbjct: 6 DKTKALDLALAQIDKQFGKGSVMKLGERPKVDIKAIPTGSIALDVALGIGGLPRGRIIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPE+SGKT+LALHAIA VQ GG A +VDAEHA DP Y+ LGV+ + L+V QPD GE
Sbjct: 66 YGPEASGKTSLALHAIANVQAEGGIAAIVDAEHALDPVYAGNLGVNTDELLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 126 ALEIADMLVRSGAVDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGGLNN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R K+GV++G+PE TSGG ALKF+ASVRL+IR +I+++K G E VG R
Sbjct: 186 TGTTAIFINQLREKVGVFFGSPETTSGGKALKFYASVRLDIR---RIETMKDGGEAVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KVS P++QAEF+I++GEG+S+ G ++D IV + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVSSPFRQAEFDILYGEGISREGSLIDLGVEEGIVRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQG 421
++K +L++NP L EIEK ++ + G +G
Sbjct: 303 KEKVRAFLKENPDLANEIEKKIKEKLGVGVTSEG 336
>gi|254512103|ref|ZP_05124170.1| protein RecA [Rhodobacteraceae bacterium KLH11]
gi|221535814|gb|EEE38802.1| protein RecA [Rhodobacteraceae bacterium KLH11]
Length = 354
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 247/328 (75%), Gaps = 3/328 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
D + D+Q+ALD+A+ I FGKGS+ +LG +E +G L LD+ALG GGLP G
Sbjct: 9 DKKNADKQKALDSALAQIERQFGKGSIMKLGEDAKQDIEASSTGSLGLDIALGIGGLPMG 68
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RIVEI+GPESSGKTTL LH IAE QK GG VDAEHA DP Y++ LGVD++ L++ QP
Sbjct: 69 RIVEIYGPESSGKTTLTLHCIAEQQKRGGVCAFVDAEHALDPQYARKLGVDLDELLISQP 128
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEI D + RSGA++++ VDSV+ALTP++E+EG++G +G+QARLMSQA+RK++
Sbjct: 129 DTGEQALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMRKLT 188
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
G+ S++ C +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK DE
Sbjct: 189 GSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKDR--DEV 246
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
VG + RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + G+W+SYGD+R
Sbjct: 247 VGNQTRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVKAGVVEKSGSWFSYGDER 306
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+GQGR+ A QYLRDN + +IE +R+
Sbjct: 307 IGQGRENAKQYLRDNARIALDIEDKIRA 334
>gi|258654119|ref|YP_003203275.1| recA protein [Nakamurella multipartita DSM 44233]
gi|258557344|gb|ACV80286.1| recA protein [Nakamurella multipartita DSM 44233]
Length = 352
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/330 (55%), Positives = 247/330 (74%), Gaps = 5/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL A+ I +GKGS+ RLG G A VE P+G + LD+ALG GGLP+GR++EI
Sbjct: 12 DREKALGIALAQIEKQYGKGSIMRLGDDGRAPVEVIPTGSIALDVALGIGGLPRGRVIEI 71
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A VQ GG A +DAEHA DP Y+++LGVD + L+V QPD GE
Sbjct: 72 YGPESSGKTTLTLHAVASVQAAGGIAAFIDAEHALDPEYARSLGVDTDALLVSQPDTGEQ 131
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDL+ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 132 ALEIADMLIRSGAIDLVVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIAGALST 191
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
T+IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G E VG R
Sbjct: 192 TNTTMIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDIR---RIEALKDGAEVVGNR 248
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+II+G G+S+ G ++D +V + GAWY+Y ++LGQG
Sbjct: 249 TRVKVVKNKMAPPFKQAEFDIIYGRGISREGSLIDVGVEQGLVRKAGAWYTYDGEQLGQG 308
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++ +LR+NP + EIEK ++ + G+
Sbjct: 309 KENVRTFLRENPDIANEIEKRIKEKLGVGA 338
>gi|415708667|ref|ZP_11462681.1| recombinase A [Gardnerella vaginalis 6420LIT]
gi|415710249|ref|ZP_11463638.1| recombinase A [Gardnerella vaginalis 6420B]
gi|388054566|gb|EIK77504.1| recombinase A [Gardnerella vaginalis 6420LIT]
gi|388055489|gb|EIK78390.1| recombinase A [Gardnerella vaginalis 6420B]
Length = 379
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/336 (53%), Positives = 248/336 (73%), Gaps = 6/336 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R RQ AL+ A+ ++ +GKGS RLG VE P+G L LD ALG
Sbjct: 14 IDADKTDPR---RQAALETALANVERQYGKGSAMRLGDRPMQDVEVIPTGSLALDTALGI 70
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD +
Sbjct: 71 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDA 130
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 131 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 190
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR++IR IK
Sbjct: 191 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRMDIRRVSTIK- 249
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
+G+E VG R +V++ K+K++ P+K AEF++++GEG+S G ++D +++ + G+W+
Sbjct: 250 -EGEEAVGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQAEVIKKSGSWF 308
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMM 413
+Y ++LGQGR+ ++L+DNP + EEI + V++ +
Sbjct: 309 TYDGEQLGQGRENVRKFLKDNPAITEEISEKVKASL 344
>gi|256825586|ref|YP_003149546.1| RecA protein [Kytococcus sedentarius DSM 20547]
gi|256688979|gb|ACV06781.1| RecA protein [Kytococcus sedentarius DSM 20547]
Length = 367
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 248/329 (75%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R R+LDA M+ I GKG+V RLG + T P+G + LD+ALG GGLP+GR++E+
Sbjct: 12 ERTRSLDAVMSQIEKQHGKGAVMRLGDDTRPPIATIPTGSIALDVALGLGGLPRGRVIEV 71
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+K LGVDV+NL+V QPD GE
Sbjct: 72 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKKLGVDVDNLLVSQPDTGEQ 131
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 132 ALEIADMLIRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALSN 191
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR+++R +I+++K G + VG R
Sbjct: 192 TGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRIDVR---RIETLKDGTDAVGNR 248
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R ++ K+KVS P+KQAEF+I++G+G+S+ G ++D + + GAWY+Y +LGQG
Sbjct: 249 TRAKIVKNKVSPPFKQAEFDILYGQGISREGGIIDMGVEHGFIRKSGAWYTYEGDQLGQG 308
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A Q+L+DNP L EE+++ +++ + G
Sbjct: 309 KENARQFLKDNPDLTEELDRKIKAKLGIG 337
>gi|218325541|emb|CAV24649.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 243/320 (75%), Gaps = 4/320 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+
Sbjct: 3 VDXSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD G
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 122
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG
Sbjct: 183 SKSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 241 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIE 406
GR+ A +LRDNP EIE
Sbjct: 301 GRENAKIFLRDNPETANEIE 320
>gi|420151065|ref|ZP_14658215.1| RecA protein [Actinomyces georgiae F0490]
gi|394772829|gb|EJF51746.1| RecA protein [Actinomyces georgiae F0490]
Length = 361
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/321 (55%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL A++ I+ FGKGSV RLG V+ P+G L LD+ALG GGLP+GR++EI
Sbjct: 15 DRNKALQVALSQIDKQFGKGSVMRLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVIEI 74
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ALGVD ++L+V QPD GE
Sbjct: 75 YGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTGEQ 134
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 135 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 194
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR+++R +K + VG R
Sbjct: 195 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDVRRIETLK--EAGAPVGNRT 252
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R +V K+K++ P+KQAEF+I++G+G+S+ G ++D IV + G+W++YGD +LGQG+
Sbjct: 253 RAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVDTGIVRKSGSWFTYGDDQLGQGK 312
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
+ Q+L DNP L EIE+ +
Sbjct: 313 ENVRQFLVDNPALAGEIEQKI 333
>gi|319408737|emb|CBI82394.1| RecA protein [Bartonella schoenbuchensis R1]
Length = 347
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/347 (54%), Positives = 253/347 (72%), Gaps = 7/347 (2%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALD+A++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRI+
Sbjct: 1 MDKTKALDSALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG VDAEHA DP Y++ LGV +E+L++ QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGVCAFVDAEHALDPIYARKLGVKLEDLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGAID++ VDSV+ALTPRAEI+GE+ GLQARLMS+ALRK++ +
Sbjct: 121 EQALEIAETLVRSGAIDVLVVDSVAALTPRAEIDGEMNDSVPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D +G
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGAIKD--RDMVIGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D IV + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKAGIVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQE 433
GR+ A Q+L +N + EIE +R + + L N L N E
Sbjct: 299 GRENAKQFLHENAEIATEIESALR---QNAGLLAIELLENAGLENTE 342
>gi|117928699|ref|YP_873250.1| recA protein [Acidothermus cellulolyticus 11B]
gi|166199593|sp|A0LV04.1|RECA_ACIC1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|117649162|gb|ABK53264.1| recA protein [Acidothermus cellulolyticus 11B]
Length = 345
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 245/329 (74%), Gaps = 3/329 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
DR++AL+ A+ I + GKGS+ RLG A ++ P+G + LD+ALG GGLP+GRIVE
Sbjct: 5 FDREKALEHAIAQIERAHGKGSLMRLGDEARAPIDVIPTGSIALDVALGIGGLPRGRIVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHA+A Q+ GG A +DAEHA DP Y+K LGVD +NL+V QPD GE
Sbjct: 65 IYGPESSGKTTLALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDNLLVSQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 125 QALEIADTLIRSGAIDVVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+G T IF+NQ+R K+GV++G+PE T+GG ALKF+AS+RL++R IK +G E +G R
Sbjct: 185 HSGTTAIFINQLREKVGVFFGSPETTTGGKALKFYASIRLDVRRIDTIK--EGQEAIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K + P++QAEF+I++ G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKCASPFRQAEFDILYNVGISREGSLIDMGVEHGIIRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +LR+NP L +EIEK ++ + G
Sbjct: 303 KENARNFLRENPDLADEIEKKIKEKLGIG 331
>gi|288556912|ref|YP_003428847.1| recombinase A [Bacillus pseudofirmus OF4]
gi|288548072|gb|ADC51955.1| recombinase A [Bacillus pseudofirmus OF4]
Length = 349
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 247/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I FGKGS+ +LG V T SG L LD+ALG GG P+GRI+E+
Sbjct: 3 DRKAALDMALRQIEKQFGKGSIMKLGEQVDQRVSTVSSGALALDIALGVGGYPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE+Q+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEIQRNGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDMIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +F+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K +G++ VG +
Sbjct: 183 SKTIAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNDMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++QAE +I++GEG+S+ G +LD A +DIV++ GAWYS+ ++RLGQGR
Sbjct: 241 KIKVVKNKVAPPFRQAEVDIMYGEGISREGSILDIAADLDIVLKSGAWYSFKEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ + QYL++NP + EIE ++R
Sbjct: 301 ENSKQYLKENPDVASEIETLIR 322
>gi|395784151|ref|ZP_10463990.1| protein recA [Bartonella melophagi K-2C]
gi|395423906|gb|EJF90094.1| protein recA [Bartonella melophagi K-2C]
Length = 347
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/349 (54%), Positives = 254/349 (72%), Gaps = 7/349 (2%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALD+A++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRI+
Sbjct: 1 MDKTKALDSALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG VDAEHA DP Y++ LGV +E+L++ QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVKLEDLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGAID++ VDSV+ALTPRAEI+GE+ GLQARLMS+ALRK++ +
Sbjct: 121 EQALEIAETLVRSGAIDVLVVDSVAALTPRAEIDGEMNDSVPGLQARLMSKALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D +G
Sbjct: 181 FRSNCMVIFINQIRIKIGVMFGSPETTTGGNALKFYASVRLDIRRVGAIKD--RDMVIGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D IV + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKAGIVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
GR+ A Q+L +N + EIE +R + + L N L N E +
Sbjct: 299 GRENAKQFLHENAEIATEIESTLR---QNAGLLAIELLENAGLENTEND 344
>gi|334137176|ref|ZP_08510620.1| RecA protein [Paenibacillus sp. HGF7]
gi|333605260|gb|EGL16630.1| RecA protein [Paenibacillus sp. HGF7]
Length = 359
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/342 (53%), Positives = 250/342 (73%), Gaps = 12/342 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VET PSG L LD+ALG GG P+GRI+EI
Sbjct: 9 DRRAALEMALRQIEKQFGKGSIMKLGESTHMQVETIPSGSLALDIALGTGGFPRGRIIEI 68
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y+ LG++++ L++ QPD GE
Sbjct: 69 YGPESSGKTTVALHAIAEVQKSGGQAAFIDAEHALDPLYASKLGINIDELLLSQPDTGEQ 128
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 129 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 188
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF+++VRL++R IK +G++ VG R
Sbjct: 189 SKVIAIFINQLREKVGVMFGNPETTPGGRALKFYSTVRLDVRRVETIK--QGNDMVGNRT 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQA+ +I++GEG+S+ G ++D +DIV + GAWYSY RLGQGR
Sbjct: 247 RVKVVKNKVAPPFKQADIDIMYGEGISREGSIIDIGTELDIVNKSGAWYSYNGDRLGQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLP 430
+ + Q+L++N + + IE+ +R + S L NV P
Sbjct: 307 ENSKQFLKENKEIADVIEQKIR---------EASNLTNVVPP 339
>gi|296269101|ref|YP_003651733.1| recA protein [Thermobispora bispora DSM 43833]
gi|296091888|gb|ADG87840.1| recA protein [Thermobispora bispora DSM 43833]
Length = 365
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 247/329 (75%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+ A+ I FGKGSV RLG A +E P+G + LD+ALG GG P+GRIVE+
Sbjct: 5 DREKALETALAQIERQFGKGSVMRLGDEARAPIEVIPTGSIALDVALGIGGFPRGRIVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALHA+A QK GG A +DAEHA DP Y++ LGVDV+ L+V QPD GE
Sbjct: 65 FGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYARKLGVDVDALLVSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 125 ALEIADMLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKVAGALSH 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
T IF+NQ+R KIGV +GNPE T+GG ALKF+AS+RL++R +I+++K G E +G R
Sbjct: 185 TRTTAIFINQLREKIGVMFGNPETTTGGKALKFYASIRLDVR---RIETLKDGTEPIGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++QA+F+I++G G+S+ G +LD IV + GAWY+Y ++LGQG
Sbjct: 242 TRVKVVKNKLAPPFRQADFDILYGVGISREGGLLDMGVEQGIVRKAGAWYTYEGEQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +LR+NP + +EIEK ++ + G
Sbjct: 302 KENARNFLRNNPDIADEIEKKIKEKLGIG 330
>gi|359407389|ref|ZP_09199866.1| protein RecA [SAR116 cluster alpha proteobacterium HIMB100]
gi|356677428|gb|EHI49772.1| protein RecA [SAR116 cluster alpha proteobacterium HIMB100]
Length = 357
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/347 (52%), Positives = 256/347 (73%), Gaps = 8/347 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +AL+AA+ I +FGKGSV +LG + ++ +G L LD+ALG GG PKGRI+E
Sbjct: 14 DKSKALEAAIGQIEKAFGKGSVMKLGQRDSVVDIQAVSTGSLGLDIALGIGGFPKGRIIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHA+AE Q GGN VDAEHA DP+Y++ LGV++++L++ QPD GE
Sbjct: 74 IYGPESSGKTTLALHAVAEAQAAGGNCAFVDAEHALDPTYARKLGVNLDDLLISQPDAGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ +DSV+AL PRAE+EGE+G +GL ARLMSQALRK++ + +
Sbjct: 134 QALEIADTLVRSGAIDVLVIDSVAALVPRAELEGEMGDTHVGLHARLMSQALRKLTSSIA 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK D+ VG +
Sbjct: 194 RSNCLVIFINQIRLKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKD--KDDVVGNQ 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+KV+ P++ EF+I++GEG+SK G +LD +V + GAW+SYG QR+GQG
Sbjct: 252 TRVKIVKNKVAAPFRTVEFDIMYGEGISKTGELLDLGVAAGLVEKSGAWFSYGTQRIGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
R+ A ++R+NP + E+E +R+ + G V + + + S+ N EE
Sbjct: 312 RENAKNFMRENPDISNELETAIRA--NAGLVQEQ--MMDASIANDEE 354
>gi|365154978|ref|ZP_09351374.1| protein recA [Bacillus smithii 7_3_47FAA]
gi|363628903|gb|EHL79604.1| protein recA [Bacillus smithii 7_3_47FAA]
Length = 351
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ AL+ A+ I FGKGS+ +LG V T PSG L LD ALG GG P+GRI+EI
Sbjct: 3 DRQAALEMALKQIEKQFGKGSIMKLGEQTDRKVSTVPSGSLALDAALGVGGYPRGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ LGVD++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQAQGGQAAFIDAEHALDPVYAQKLGVDIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF++S+RLE+R +K +G+E VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSIRLEVRRAETLK--QGNEMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P++ A+ +I++GEG+SK G ++D +DI+ + G+WYSY ++RLGQGR
Sbjct: 241 RIKVVKNKVAPPFRTADVDIMYGEGISKEGEIIDLGSELDIIQKSGSWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L++NP +++EI +R
Sbjct: 301 ENAKQFLKENPEIRDEIMYKIR 322
>gi|452963778|gb|EME68836.1| recombinase A [Magnetospirillum sp. SO-1]
Length = 359
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/328 (56%), Positives = 244/328 (74%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
D +DRQ+AL+AA++ I +FGKGS+ ++G + E +G L LD+ALG GGLP+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKMGQKDQVVETEVISTGSLGLDVALGIGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGV+++ L++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHVIAEAQKKGGTCAFVDAEHALDPIYARKLGVNLDELLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G+ SK+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRLEIR G IK DE
Sbjct: 190 TGSVSKSKTIVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLEIRRVGAIKDR--DE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+K +F+I++GEGVSK+G ++D +V + GAW+SY
Sbjct: 248 VVGNQTRVKVVKNKLAPPFKVVDFDIMYGEGVSKMGELIDLGVKASVVEKSGAWFSYNST 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A Q+LRDN + EIE +R
Sbjct: 308 RIGQGRENAKQFLRDNQAMAAEIEGTIR 335
>gi|332685813|ref|YP_004455587.1| recombinase A [Melissococcus plutonius ATCC 35311]
gi|332369822|dbj|BAK20778.1| RecA protein [Melissococcus plutonius ATCC 35311]
Length = 362
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 242/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKGS+ +LG V T PSG L LD+ALG GG P+GRIVEI
Sbjct: 4 DRKTALDAALKKIEKNFGKGSIMKLGEKADQQVATVPSGSLALDVALGVGGYPRGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++L+AIAE+QK GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVSLNAIAEIQKQGGTAAFIDAEHALDPQYAQKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGAID++ VDSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ SK
Sbjct: 124 GLEIADALVSSGAIDIVVVDSVAALVPRAEIDGEMGASHVGLQARLMSQALRKLSGSISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE T GG ALKF+A+VRLE+R ++K +G + VG R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQLK--QGTDIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+S+ G +LD A DI+ + GAWYSY ++R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGQGISQEGELLDMAVEQDIIDKSGAWYSYNEERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ Y+ ++P + EEI K VR
Sbjct: 302 ENVKNYMIEHPEMVEEISKKVR 323
>gi|374087442|gb|AEY82524.1| RecA [Rhizobium sp. LPU83]
Length = 361
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ + +D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNESVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+ + SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E
Sbjct: 190 TASISKSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
+G + RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY Q
Sbjct: 248 VIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ A +LRDNP + EIE +R
Sbjct: 308 RLGQGRENAKIFLRDNPEVLREIEASLR 335
>gi|730487|sp|P41054.1|RECA_STRAM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|511133|emb|CAA82979.1| RecA [Streptomyces ambofaciens]
Length = 372
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR++E+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRSKEPIEVIPTGSTALDVALGVGGLPRGRVIEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y++ LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAQKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|253681765|ref|ZP_04862562.1| protein RecA [Clostridium botulinum D str. 1873]
gi|253561477|gb|EES90929.1| protein RecA [Clostridium botulinum D str. 1873]
Length = 348
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA+ I FGKGSV +LG +E +G L+LD+ALG GG+P+GRI+EI
Sbjct: 4 EKMKALQAALTQIEKQFGKGSVMKLGEEQVLNIEAISTGSLSLDIALGIGGIPRGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH +AE QK GG A +DAEHA DP Y+KALGVD++NLIV QPD GE
Sbjct: 64 FGPESSGKTTVALHIVAEAQKAGGTAAFIDAEHALDPIYAKALGVDIDNLIVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 124 ALEICEALVRSGAVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPE T GG ALKF+ASVRL++R IK +GD +G R
Sbjct: 184 SKCAAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRKIEIIK--QGDAFLGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++G G+S G +LD +I+ + G+W+SY D RLGQGR
Sbjct: 242 RVKVVKNKVAPPFKQAEFDIMYGSGISYEGNVLDVGVENEIIQKSGSWFSYKDTRLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ Q+L++NP + E+E +R+
Sbjct: 302 ENVKQFLKENPNILVEVENQIRA 324
>gi|288958054|ref|YP_003448395.1| recombination protein [Azospirillum sp. B510]
gi|288910362|dbj|BAI71851.1| recombination protein [Azospirillum sp. B510]
Length = 359
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/325 (57%), Positives = 248/325 (76%), Gaps = 6/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVET--FPSGCLTLDLALG-GGLPKGRI 145
+D+Q+ALDAA++ I +FGKGS+ +LG A LVET +G L LD+ALG GGLP+GRI
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLG-ARENLVETEVVSTGSLGLDIALGIGGLPRGRI 72
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
VEI+GPESSGKTTLALHAIA+ QK GG VDAEHA DPSY++ LGV+++ L++ QPD
Sbjct: 73 VEIYGPESSGKTTLALHAIAQAQKNGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDA 132
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK++G+
Sbjct: 133 GEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGS 192
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
+K+ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 193 IAKSNCLVIFINQIRLKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKDR--DTVVG 250
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
+ RV+V K+K++ P++ EF+I++GEGVSK+G +LD +V + GAW+SY R+G
Sbjct: 251 NQTRVKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVDKSGAWFSYDGTRIG 310
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVR 410
QGR+ A +LR+NP + + IE +R
Sbjct: 311 QGRENAKTFLRNNPEMADAIEAKIR 335
>gi|260888185|ref|ZP_05899448.1| protein RecA [Selenomonas sputigena ATCC 35185]
gi|330838472|ref|YP_004413052.1| recA protein [Selenomonas sputigena ATCC 35185]
gi|260862019|gb|EEX76519.1| protein RecA [Selenomonas sputigena ATCC 35185]
gi|329746236|gb|AEB99592.1| recA protein [Selenomonas sputigena ATCC 35185]
Length = 361
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 248/327 (75%), Gaps = 4/327 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+DR+ AL A+ I FGKGS+ RLG A + VET P+G L LD+ALG GGLP+GRIV
Sbjct: 1 MDREEALKNALKHIEKEFGKGSIMRLGEASANMNVETIPTGILPLDVALGVGGLPRGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
E++GPESSGKTT+ LH IAEVQK GG A +DAEHA DP Y+K LGV+++ L++ QPD G
Sbjct: 61 EVYGPESSGKTTVTLHMIAEVQKNGGIAAFIDAEHALDPVYAKKLGVNIDELLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E AL+I D + RSGAID+I VDSV+AL P+AEI+G++G Q +G+ ARLMS+A+RK++G
Sbjct: 121 EQALDIVDALVRSGAIDIIVVDSVAALVPKAEIDGDMGDQVVGMHARLMSRAMRKLTGFI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +F+NQIR K+GV +G+PE T+GG ALKF+++VRL++R T KI ++G E +G
Sbjct: 181 SKSRTVAVFINQIREKVGVMFGSPETTTGGRALKFYSTVRLDVRKTDKI--MQGQEMIGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R +VRV K+KV+ P+K AEF+I++GEGVS++G +LD A DI+ + G+WYSY RLGQ
Sbjct: 239 RTKVRVVKNKVAPPFKTAEFDIMYGEGVSRVGTVLDIATDFDIIEKSGSWYSYNGSRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMM 413
G++ A + L++ P L EIE+ VR+ +
Sbjct: 299 GKENAKKALKEKPELAAEIEEKVRAKL 325
>gi|332799245|ref|YP_004460744.1| protein recA [Tepidanaerobacter acetatoxydans Re1]
gi|438002374|ref|YP_007272117.1| RecA protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696980|gb|AEE91437.1| Protein recA [Tepidanaerobacter acetatoxydans Re1]
gi|432179168|emb|CCP26141.1| RecA protein [Tepidanaerobacter acetatoxydans Re1]
Length = 345
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/323 (54%), Positives = 248/323 (76%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL+ A+ I FGKGS+ +LG A +E +G L LD+ALG GG+P+GR++E
Sbjct: 3 EKEKALEMAITQIERQFGKGSIMKLGEAAARFNIEAISTGALPLDIALGVGGVPRGRVIE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
IFGPESSGKTT+ALH IAE QK GG A +DAEHA DP+Y+K LGV+ ++L++ QPD GE
Sbjct: 63 IFGPESSGKTTVALHIIAEAQKGGGTAAFIDAEHALDPTYAKNLGVNTDDLLISQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGA+D++ +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG S
Sbjct: 123 QALEIAETLVRSGAVDVVVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAIS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R +K +G+E +G R
Sbjct: 183 KSNTVAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRRIETLK--QGEEMLGNR 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+II+GEG+S+ GC+LD A ++ + GAWYSYG +++GQG
Sbjct: 241 TRVKVVKNKVAPPFKQAEFDIIYGEGISREGCVLDFAVEEGLIQKSGAWYSYGKEKIGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A QYLR++P + +++E V+
Sbjct: 301 RENAKQYLREHPEILQDVELQVK 323
>gi|444299278|emb|CCP29588.1| recombinase A, partial [Rhizobium pusense]
gi|444299280|emb|CCP29589.1| recombinase A, partial [Rhizobium pusense]
Length = 319
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/318 (59%), Positives = 243/318 (76%), Gaps = 4/318 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD+++L++ QPD GE
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 120
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + SK
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG +
Sbjct: 181 SKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGNQT 238
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQGR
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 389 DKALQYLRDNPLLQEEIE 406
+ A +LRDNP EIE
Sbjct: 299 ENAKTFLRDNPDTANEIE 316
>gi|253578515|ref|ZP_04855787.1| RecA protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850833|gb|EES78791.1| RecA protein [Ruminococcus sp. 5_1_39BFAA]
Length = 354
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++Q+AL+AA+ I +GKGSV +LG +G + VET P+G L+LD+ALG GG+PKGRI+E
Sbjct: 5 EKQKALEAALGQIEKHYGKGSVMKLGESGANMQVETVPTGSLSLDIALGVGGVPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPDNGE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF++S+R+++R +K +G E VG
Sbjct: 185 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRMDVRRVETLK--QGGEMVGNH 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAEF+I+FG G+SK G +LD A IV + GAWY+Y ++GQG
Sbjct: 243 TRIKVVKNKVAPPFKQAEFDIMFGTGISKEGDILDLAAECGIVNKSGAWYAYNGDKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +L+++P + +EIEK VR
Sbjct: 303 RENAKIFLKEHPDICDEIEKQVR 325
>gi|373454706|ref|ZP_09546570.1| protein recA [Dialister succinatiphilus YIT 11850]
gi|371935569|gb|EHO63314.1| protein recA [Dialister succinatiphilus YIT 11850]
Length = 352
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/348 (52%), Positives = 253/348 (72%), Gaps = 7/348 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL++AM+ I FG GS+ RLG G L ++ P+G L LD+A+G GG P+GR++E
Sbjct: 10 EKKKALESAMHQITKEFGAGSIMRLGDMGDKLDIDVIPTGSLALDIAVGVGGYPRGRVIE 69
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QKLGG A +DAEHA DP Y+ LGVD ++L++ QPD+GE
Sbjct: 70 IYGPESSGKTTLALHAIAEAQKLGGVAAFIDAEHALDPMYAHHLGVDTKDLLISQPDSGE 129
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
AL I + + RSGA+D++ +DSV+AL P+ EIEG+I Q +GLQARLMS+ALRK++G S
Sbjct: 130 QALSICESLVRSGAVDIVVIDSVAALVPKQEIEGDISDQSVGLQARLMSKALRKLTGIIS 189
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +IF+NQIR K+GV +GNPE T+GG ALKF+AS+R+EIR IKS G E +G R
Sbjct: 190 KSRTIVIFINQIREKVGVMFGNPETTTGGRALKFYASMRIEIRRAEAIKS--GTEVIGNR 247
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+K AEF+I++GEG+SK G +LD A MDI+ + GAWYSY R+ QG
Sbjct: 248 TRAKVVKNKVAPPFKVAEFDIMYGEGISKEGTLLDIAVNMDIIQKSGAWYSYKGNRISQG 307
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
R+ A YL+++P + +EI+K++R + V F V EEN
Sbjct: 308 REAAKTYLKEHPDVAQEIDKIIRDTL---VVEPDHFEDGVLSEQDEEN 352
>gi|345002449|ref|YP_004805303.1| recA protein [Streptomyces sp. SirexAA-E]
gi|344318075|gb|AEN12763.1| recA protein [Streptomyces sp. SirexAA-E]
Length = 376
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/322 (56%), Positives = 244/322 (75%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QKLGG+ +DAEHA DP Y+K LGVD+++LI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKLGGSVAFIDAEHALDPEYAKKLGVDIDSLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +L+DNP L EIEK +
Sbjct: 302 KENARNFLKDNPDLANEIEKKI 323
>gi|317497517|ref|ZP_07955836.1| recA bacterial DNA recombination protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895200|gb|EFV17363.1| recA bacterial DNA recombination protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 351
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/323 (54%), Positives = 246/323 (76%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I +GKGSV +LG +E P+G ++LD+ALG GG+PKGRI+E
Sbjct: 5 EKLKALDAALVKIEKDYGKGSVMKLGEYQADRTIEVTPTGSISLDIALGVGGVPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPD GE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
LEI + M RSGAID+I VDSV+AL P+AEI+G++G +GLQARLMSQALRK++G S
Sbjct: 125 QGLEITETMVRSGAIDIIIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTGVVS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K CT+IF+NQ+R K+GV +GNPE T+GG ALKF++S+RL++R T +K + E +G R
Sbjct: 185 KFNCTVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRLDVRRTETLK--QAGEMIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAEF+I+FG+G+SK G +LD A DI+ + GAWY+Y +++GQG
Sbjct: 243 TRIKVVKNKVAPPFKQAEFDIMFGKGISKYGDILDLAADADIIHKSGAWYAYNGEKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + +YL D+P + E +E +R
Sbjct: 303 RENSKKYLEDHPDIAETVEHAIR 325
>gi|298292139|ref|YP_003694078.1| recA protein [Starkeya novella DSM 506]
gi|296928650|gb|ADH89459.1| recA protein [Starkeya novella DSM 506]
Length = 360
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I FGKGS+ RLG + +ET +G L LD+ALG GGLP+GRIV
Sbjct: 14 MDKAKALDAALSQIERHFGKGSIMRLGKNDKIMEIETVSTGSLGLDIALGIGGLPRGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH IAE QK GG +DAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 74 EIFGPESSGKTTLALHTIAESQKKGGVCAFIDAEHALDPIYARKLGVDLDNLLISQPDAG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ VDSV+ALTPRAE++GE+G Q G+QARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAVDVLVVDSVAALTPRAELDGEMGDNQPGMQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+++ +IF+NQIR KIGV YG+PE T+GG ALKF++SVRL+IR G IK + DE VG
Sbjct: 194 NRSQTMVIFINQIRMKIGVMYGSPETTTGGNALKFYSSVRLDIRRIGAIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELIDLGIKAGVVEKSGAWFSYDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR NP + IE +R
Sbjct: 312 GRENAKNFLRQNPDVAGRIEATIR 335
>gi|297243442|ref|ZP_06927375.1| RecA/RadA DNA recombinase [Gardnerella vaginalis AMD]
gi|296888689|gb|EFH27428.1| RecA/RadA DNA recombinase [Gardnerella vaginalis AMD]
Length = 379
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/336 (53%), Positives = 248/336 (73%), Gaps = 6/336 (1%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+D D R RQ AL+ A+ ++ +GKGS RLG VE P+G L LD ALG
Sbjct: 14 IDADKTDPR---RQAALETALANVERQYGKGSAMRLGDRPMQDVEVIPTGSLALDTALGI 70
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG+P+GRIVE++GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD +
Sbjct: 71 GGVPRGRIVEVYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDA 130
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
LIV QPDNGE ALEIAD + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQ
Sbjct: 131 LIVSQPDNGEQALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQ 190
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRKM+G S+AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVR++IR IK
Sbjct: 191 ALRKMTGALSQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRMDIRRVSTIK- 249
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
+G+E VG R +V++ K+K++ P+K AEF++++GEG+S G ++D +++ + G+W+
Sbjct: 250 -EGEEAVGNRTKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQAEVIKKSGSWF 308
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMM 413
+Y ++LGQGR+ ++L+DNP + EEI + V++ +
Sbjct: 309 TYEGEQLGQGRENVRKFLKDNPAITEEISEKVKASL 344
>gi|225010383|ref|ZP_03700855.1| recA protein [Flavobacteria bacterium MS024-3C]
gi|225005862|gb|EEG43812.1| recA protein [Flavobacteria bacterium MS024-3C]
Length = 335
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 246/322 (76%), Gaps = 2/322 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL ++ ++ ++GKG+V ++G + VE SG L LDLALG GG P+GR++EI+GP
Sbjct: 10 KALQLTLDKLDKTYGKGAVMKMGDSVAQDVEVISSGSLGLDLALGVGGYPRGRVIEIYGP 69
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTL LHA+AE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPDNGE ALE
Sbjct: 70 ESSGKTTLTLHAMAEAQKAGGIAAFIDAEHAFDRFYAQKLGVDIDNLIISQPDNGEQALE 129
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G+ SK C
Sbjct: 130 IADNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGSISKTNC 189
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
T+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK GD G + RV+
Sbjct: 190 TVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDTDGDVQ-GNKTRVK 248
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+KV+ P+K AEF+I++G+GVSK+G ++D +I+ + G+W+SYG+ +LGQGRD
Sbjct: 249 VVKNKVAPPFKTAEFDIMYGQGVSKVGEVIDLGVDFEIIKKSGSWFSYGETKLGQGRDAV 308
Query: 392 LQYLRDNPLLQEEIEKVVRSMM 413
L DNP L +E+E ++ +
Sbjct: 309 KTLLLDNPDLMDELEGKIKEAL 330
>gi|372208782|ref|ZP_09496584.1| recombinase A [Flavobacteriaceae bacterium S85]
Length = 337
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL ++ ++ ++GKG+V ++G VE SG L LDLALG GG PKGRI+EI
Sbjct: 10 DKLKALQLTLDKLDKTYGKGAVMKMGDMAAQDVEVISSGSLGLDLALGVGGYPKGRIIEI 69
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL +HAIAE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPD+GE
Sbjct: 70 YGPESSGKTTLTIHAIAEAQKAGGIAAFIDAEHAFDRFYAENLGVDIDNLIISQPDHGEQ 129
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G SK
Sbjct: 130 ALEIAENLIRSGAIDIIVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGTISK 189
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVR++IR ++K GD +G
Sbjct: 190 TKCTVIFINQLRDKIGVMFGNPETTTGGNALKFYASVRVDIRRRTQLKD--GDTVIGNST 247
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V++ K+KV+ P++QAEF+I++GEG+SK+G +LD I+ + G+W+SYGD +LGQGR
Sbjct: 248 KVKIVKNKVAPPFQQAEFDIMYGEGISKVGEILDIGVNYGIIKKSGSWFSYGDTKLGQGR 307
Query: 389 DKALQYLRDNPLLQEEIE-KVVRSM 412
D ++DNP L EE+E K++ ++
Sbjct: 308 DAVKSLIKDNPELAEELEAKIIEAI 332
>gi|405980451|ref|ZP_11038790.1| protein recA [Actinomyces turicensis ACS-279-V-Col4]
gi|404390444|gb|EJZ85513.1| protein recA [Actinomyces turicensis ACS-279-V-Col4]
Length = 364
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/328 (54%), Positives = 242/328 (73%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+ A++ I+ FGKGSV RLG V+ P+G L LD+ALG GGLP+GR++EI
Sbjct: 16 DRNKALEVALSQIDKQFGKGSVMRLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVIEI 75
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y+KALGVD + L+V QPD GE
Sbjct: 76 YGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDALLVSQPDTGEQ 135
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 136 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 195
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR+++R +K VG R
Sbjct: 196 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDVRRIETLKEAGA--PVGNRT 253
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R +V K+K++ P+KQAEF+I++G+G+S+ G ++D +V + G+W++YGD +LGQG+
Sbjct: 254 RAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGVVRKSGSWFTYGDDQLGQGK 313
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ Q+L DNP L EIE + + + G
Sbjct: 314 ENVRQFLIDNPELATEIENKILAALGIG 341
>gi|167748884|ref|ZP_02421011.1| hypothetical protein ANACAC_03658 [Anaerostipes caccae DSM 14662]
gi|317470274|ref|ZP_07929668.1| recA bacterial DNA recombination protein [Anaerostipes sp.
3_2_56FAA]
gi|167651854|gb|EDR95983.1| RecA protein [Anaerostipes caccae DSM 14662]
gi|316902247|gb|EFV24167.1| recA bacterial DNA recombination protein [Anaerostipes sp.
3_2_56FAA]
Length = 349
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/324 (54%), Positives = 253/324 (78%), Gaps = 6/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I +GKG+V +LG + +ET P+G L+LD+ALG GG+P+GR++E
Sbjct: 5 EKLKALDAALTKIEKDYGKGAVMKLGEYQADMSIETTPTGSLSLDIALGVGGIPRGRVIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y++ +GVDV+NL + QPD GE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAQNIGVDVDNLYISQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
LEIA+ M RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QGLEIAETMVRSGAVDIIIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAIIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED-VGV 326
K+ CT+IF+NQ+R K+GV +GNPE T+GG ALKF++S+RL++R +I+++K D VG
Sbjct: 185 KSNCTVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRLDVR---RIETLKQAGDMVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R R++V K+KV+ P+KQAEF+I+FGEG+SK G +LD A +D++ + GAWY+Y +++GQ
Sbjct: 242 RTRIKVVKNKVAPPFKQAEFDIMFGEGISKEGDILDLAAGVDVIKKSGAWYAYQGEKIGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A YL+++P + +E+E VR
Sbjct: 302 GRENAKTYLKEHPEVAQEVESAVR 325
>gi|154509073|ref|ZP_02044715.1| hypothetical protein ACTODO_01590 [Actinomyces odontolyticus ATCC
17982]
gi|153798707|gb|EDN81127.1| RecA protein [Actinomyces odontolyticus ATCC 17982]
Length = 363
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+ A++ I+ FGKGSV RLG V+ P+G L LD+ALG GGLP+GR++E+
Sbjct: 15 DRNKALEVALSQIDKQFGKGSVMRLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVIEV 74
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ALGVD ++L+V QPD GE
Sbjct: 75 YGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTGEQ 134
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 135 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 194
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR+++R +K VG R
Sbjct: 195 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDVRRIETLKEAGA--PVGNRT 252
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R +V K+K++ P+KQAEF+I++G+G+S+ G ++D IV + G+W++YGD +LGQG+
Sbjct: 253 RAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGIVRKSGSWFTYGDDQLGQGK 312
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
+ Q+L DNP L EIE+ +
Sbjct: 313 ENVRQFLVDNPELANEIEQKI 333
>gi|132236|sp|P24074.1|RECA_RHILV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|581514|emb|CAA42578.1| RecA protein [Rhizobium leguminosarum]
Length = 351
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 245/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ +LGS + +ET +G L LD+ALG GGLP+GRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD G
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSG +D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 121 EQALEITDTLVRSGRVDVLVVDSVAALTPRAEIEGEMGDTVPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E +G
Sbjct: 181 SKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVIGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LRDNP L EIE +R
Sbjct: 299 GRENAKTFLRDNPDLAREIELSLR 322
>gi|293192297|ref|ZP_06609408.1| protein RecA [Actinomyces odontolyticus F0309]
gi|399526449|ref|ZP_10766228.1| RecA protein [Actinomyces sp. ICM39]
gi|292820212|gb|EFF79206.1| protein RecA [Actinomyces odontolyticus F0309]
gi|398363067|gb|EJN46717.1| RecA protein [Actinomyces sp. ICM39]
Length = 363
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +AL+ A++ I+ FGKGSV RLG V+ P+G L LD+ALG GGLP+GR++E+
Sbjct: 15 DRNKALEVALSQIDKQFGKGSVMRLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVIEV 74
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GGNA +DAEHA DP Y++ALGVD ++L+V QPD GE
Sbjct: 75 YGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTGEQ 134
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 135 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 194
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR+++R +K VG R
Sbjct: 195 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRIDVRRIETLKEAGA--PVGNRT 252
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R +V K+K++ P+KQAEF+I++G+G+S+ G ++D IV + G+W++YGD +LGQG+
Sbjct: 253 RAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGIVRKSGSWFTYGDDQLGQGK 312
Query: 389 DKALQYLRDNPLLQEEIEKVV 409
+ Q+L DNP L EIE+ +
Sbjct: 313 ENVRQFLVDNPELANEIEQKI 333
>gi|149202695|ref|ZP_01879667.1| recombinase A [Roseovarius sp. TM1035]
gi|149143977|gb|EDM32011.1| recombinase A [Roseovarius sp. TM1035]
Length = 357
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 243/329 (73%), Gaps = 4/329 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ R D+Q+ALD+A+ I FGKGS+ +LG +E +G L LD+ALG GG+PK
Sbjct: 11 NKRNADKQKALDSALAQIERQFGKGSIMKLGGDNAVKDIEATSTGSLGLDIALGIGGIPK 70
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTL LH +AE QK GG VDAEHA DP Y++ LGVD++ L++ Q
Sbjct: 71 GRIVEIYGPESSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPVYARKLGVDLDELLISQ 130
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+ +I VDSV+ALTP++E+EGE+G +G+ ARLMSQA+RK+
Sbjct: 131 PDTGEQALEIVDTLVRSGAVSMIVVDSVAALTPKSELEGEMGDSSVGVHARLMSQAMRKL 190
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G+ S+ CT+IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK DE
Sbjct: 191 TGSISRTNCTVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGSIKDR--DE 248
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG RV+V K+KV+ P+KQ EF+I+FGEG+SK G ++D +V + G+WYSYGDQ
Sbjct: 249 VVGNTTRVKVVKNKVAPPFKQVEFDIMFGEGISKTGELIDIGVKAGVVEKSGSWYSYGDQ 308
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
R+GQGR+ +LRDNP + EIE +R+
Sbjct: 309 RIGQGRENTKGFLRDNPAMAIEIEDKIRA 337
>gi|444299284|emb|CCP29591.1| recombinase A, partial [Agrobacterium genomosp. 7]
gi|444299286|emb|CCP29592.1| recombinase A, partial [Agrobacterium genomosp. 7]
Length = 319
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/318 (59%), Positives = 242/318 (76%), Gaps = 4/318 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD GE
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 120
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + SK
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG +
Sbjct: 181 SKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGNQT 238
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQGR
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 389 DKALQYLRDNPLLQEEIE 406
+ A +LRDNP EIE
Sbjct: 299 ENAKMFLRDNPETANEIE 316
>gi|294672854|ref|YP_003573470.1| RecA protein [Prevotella ruminicola 23]
gi|2500093|sp|Q59717.1|RECA_PRER2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|1420927|gb|AAC44506.1| RecA [Prevotella ruminicola]
gi|294472544|gb|ADE81933.1| RecA protein [Prevotella ruminicola 23]
Length = 340
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 242/327 (74%), Gaps = 3/327 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AAM+ I +GKGS+ R+G VE P+G + L+ ALG GG PKGRI+EI
Sbjct: 14 EKLKALQAAMSKIEKDYGKGSIMRMGDEQIDNVEVIPTGSIGLNAALGVGGYPKGRIIEI 73
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA+HAIAE QK GG A +DAEHAFD Y+ LGVDVENL + QPDNGE
Sbjct: 74 YGPESSGKTTLAIHAIAECQKNGGIAAFIDAEHAFDRFYAAHLGVDVENLYISQPDNGEQ 133
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD++ RS AID+I +DSV+ALTP+ EIEG++G +GLQARLMSQALRK++ SK
Sbjct: 134 ALEIADQLIRSSAIDIIVIDSVAALTPKKEIEGDMGDSAVGLQARLMSQALRKLTSTISK 193
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR IK GD +G +V
Sbjct: 194 TNTTCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRKVTAIKD--GDNIIGNQV 251
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEFEI FGEG+SK+G ++D +I+ + G+W+SYGD +L QGR
Sbjct: 252 RVKVIKNKVAPPFRKAEFEITFGEGISKIGEIVDLGVEYEIIKKSGSWFSYGDSKLAQGR 311
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSD 415
D L+DNP L EE+E + ++D
Sbjct: 312 DAVKALLKDNPELCEELEAKIMEAIAD 338
>gi|357402111|ref|YP_004914036.1| multifunctional SOS repair factor [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|386358181|ref|YP_006056427.1| DNA recombinase A [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337768520|emb|CCB77233.1| multifunctional SOS repair factor [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|365808689|gb|AEW96905.1| DNA recombinase A [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 375
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 247/329 (75%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEIIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+ GG VDAEHA DP Y+K LGVD+++LI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQRAGGAVAFVDAEHALDPEYAKKLGVDIDSLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL+IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D + + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFIRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLADEIEKKIKEKLGIG 330
>gi|379737064|ref|YP_005330570.1| recombinase A [Blastococcus saxobsidens DD2]
gi|378784871|emb|CCG04542.1| Recombinase A (recA) [Blastococcus saxobsidens DD2]
Length = 345
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 245/329 (74%), Gaps = 3/329 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
LDR +ALD A+ I+ FGKGSV RLG + ++ P+G + LD+ALG GGLP+GR+VE
Sbjct: 5 LDRDKALDMALAQIDKQFGKGSVMRLGDSPEVAIKVIPTGSIALDIALGIGGLPRGRVVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALHA+A Q GG A +DAEHA DP Y++A+GVD + L+V QPD GE
Sbjct: 65 VYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYARAIGVDTDALLVSQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 125 QALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+G T IF+NQ+R K+GV YG+PEVT+GG ALKF++SVRL++R +K +G + +G R
Sbjct: 185 NSGTTAIFINQLREKVGVVYGSPEVTTGGRALKFYSSVRLDVRRIETLK--QGTDAIGSR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAE +I++G+G S+ G ++D IV + GAWY+Y +LGQG
Sbjct: 243 TRIKVVKNKVAAPFKQAELDILWGQGFSREGGIVDAGVEQGIVKKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ +L+DNP L +EIEK V+ + G
Sbjct: 303 KENVRNFLKDNPDLADEIEKKVKEKLGIG 331
>gi|220932026|ref|YP_002508934.1| recA protein [Halothermothrix orenii H 168]
gi|219993336|gb|ACL69939.1| recA protein [Halothermothrix orenii H 168]
Length = 357
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL+ A+ I FG+GS+ +LG A VE P+G L LDLALG GG+P+GRI+EI
Sbjct: 8 EKEKALEMAVKRIEKQFGQGSIMKLGEATALNVEVIPTGALPLDLALGVGGVPRGRIIEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH IAE QK G A +DAEHA DP YS+ LGV+++NL++ QP+NGE
Sbjct: 68 YGPESSGKTTLALHIIAEAQKRNGVAAFIDAEHALDPKYSENLGVNIDNLLISQPNNGEE 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RS AID+I +DSV+AL P+AE++GE+G +GLQARLMSQA+RK+SG SK
Sbjct: 128 ALEIAEALVRSNAIDVIVIDSVAALVPKAELDGEMGDSHVGLQARLMSQAMRKLSGAISK 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF++SVR+EIR T +K+ GDE VG +
Sbjct: 188 SKTVCIFINQIREKVGVMFGNPETTPGGRALKFYSSVRMEIRKTQTLKN--GDEIVGSQT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++A F+I++G G+S GC+LD I+ R G+WYSYGD+RLGQGR
Sbjct: 246 RVKVVKNKVAPPFRRAIFDIMYGTGISTSGCILDMGVDTGIIDRAGSWYSYGDERLGQGR 305
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A +L DNP + +EIE ++
Sbjct: 306 ENAKNFLEDNPDIMKEIEMKIK 327
>gi|146328886|ref|YP_001209208.1| DNA recombination protein RecA [Dichelobacter nodosus VCS1703A]
gi|166220643|sp|A5EW90.1|RECA_DICNV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|146232356|gb|ABQ13334.1| DNA recombination protein RecA [Dichelobacter nodosus VCS1703A]
Length = 350
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 248/332 (74%), Gaps = 4/332 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL A + ++ FGKG+V RLG A ++ +G LTLD+ALG GGLPKGRIVE
Sbjct: 4 EQKKALTAVLTQLDKQFGKGTVMRLGEQVAAHDIQAISTGSLTLDIALGIGGLPKGRIVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ LH IAE QK GG A +DAEHA DP Y++ LGV+ ++L V QPD GE
Sbjct: 64 IYGPESSGKTTMMLHVIAEAQKNGGTAAFIDAEHALDPIYARKLGVNTDDLYVTQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA D+I VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GN
Sbjct: 124 QALEICDALVRSGAFDVIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+A ++F+NQIR KIGV +G+PE T+GG ALKF+ASVR++IR G IK +GDE +G
Sbjct: 184 RANTLVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRMDIRRIGSIK--EGDEVLGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+GVS+ G ++ A DI+ + GAWYSY D+++GQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGVSREGEIIQLAVNADIMQKSGAWYSYRDEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVH 419
++K YL+++P + +EIE +R G +H
Sbjct: 302 KEKVRLYLKEHPDVAQEIETKIREKFIGGELH 333
>gi|295810382|emb|CBL81075.1| recombinase A [Agrobacterium larrymoorei]
Length = 319
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/318 (59%), Positives = 242/318 (76%), Gaps = 4/318 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD GE
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + SK
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG +
Sbjct: 181 SKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGNQT 238
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQGR
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 389 DKALQYLRDNPLLQEEIE 406
A +LRDNP + EIE
Sbjct: 299 XNAKGFLRDNPAVANEIE 316
>gi|256618079|ref|ZP_05474925.1| protein recA [Enterococcus faecalis ATCC 4200]
gi|256597606|gb|EEU16782.1| protein recA [Enterococcus faecalis ATCC 4200]
Length = 348
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/332 (53%), Positives = 248/332 (74%), Gaps = 5/332 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKGS+ +LG + T PSG L LD+ALG GG P+GRI+E+
Sbjct: 4 DRKVALDAALKKIEKNFGKGSIMKLGEKADQKISTIPSGSLALDVALGVGGYPRGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHAIAEVQ+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVSLHAIAEVQRNGGTAAFIDAEHALDPQYAEKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
+LEIAD + SGAID++ +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 SLEIADALVSSGAIDIVVIDSVAALVPRAEIDGEMGASHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE T GG ALKF+A+VRLE+R ++K +G + VG R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQLK--QGTDIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+S+ G +LD A D++ + GAWY Y ++R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGQGISQEGELLDMAVEKDLISKSGAWYGYKEERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSM--MSDGSV 418
+ A QY+ D+P + E+ K+VR + DGS
Sbjct: 302 ENAKQYMADHPEMMAEVSKLVRDAYGIGDGST 333
>gi|429761199|ref|ZP_19293630.1| RecA protein [Anaerostipes hadrus DSM 3319]
gi|429184340|gb|EKY25360.1| RecA protein [Anaerostipes hadrus DSM 3319]
Length = 351
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/323 (54%), Positives = 246/323 (76%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I +GKGSV +LG +E P+G ++LD+ALG GG+PKGRI+E
Sbjct: 5 EKLKALDAALVKIEKDYGKGSVMKLGEYQADRTIEVTPTGSISLDIALGVGGVPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPD GE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
LEI + M RSGAID+I VDSV+AL P+AEI+G++G +GLQARLMSQALRK++G S
Sbjct: 125 QGLEITETMVRSGAIDIIIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTGVVS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K CT+IF+NQ+R K+GV +GNPE T+GG ALKF++S+RL++R T +K + E +G R
Sbjct: 185 KFNCTVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRLDVRRTETLK--QAGEMIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAEF+I+FG+G+SK G +LD A DI+ + GAWY+Y +++GQG
Sbjct: 243 TRIKVVKNKVAPPFKQAEFDIMFGKGISKYGDILDLAADADIIHKSGAWYAYNGEKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + +YL D+P + E +E +R
Sbjct: 303 RENSKKYLEDHPDIAETVEHAIR 325
>gi|213964486|ref|ZP_03392686.1| protein RecA [Corynebacterium amycolatum SK46]
gi|213952679|gb|EEB64061.1| protein RecA [Corynebacterium amycolatum SK46]
Length = 403
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/343 (53%), Positives = 251/343 (73%), Gaps = 5/343 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +ALD A+ +I FGKG+V RLG ++ PSG + +D+ALG GG P+GRIVEI
Sbjct: 50 DRLKALDVALANIEKDFGKGAVMRLGDDNRPPIQVIPSGNIAIDVALGLGGFPRGRIVEI 109
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE Q+ GG A +DAEHA DP Y++ LGVD +NL+V QPD GE
Sbjct: 110 YGPESSGKTTVALHAIAEAQRQGGIAAFIDAEHALDPVYARKLGVDTDNLLVSQPDTGEQ 169
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGAID+I VDSV+ALTP+AEI+GE+G +GLQARLMSQALRKM+G S
Sbjct: 170 ALEITDMLVRSGAIDIIVVDSVAALTPKAEIDGEMGDSHVGLQARLMSQALRKMTGALSN 229
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED-VGVR 327
G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR ++R +I+++K +D VG R
Sbjct: 230 TGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRCDVR---RIQTLKDGQDAVGNR 286
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KVS P+KQAEF+II+GEG+S+ G ++D IV + G+W++Y +LGQG
Sbjct: 287 TRLKVVKNKVSPPFKQAEFDIIYGEGISREGSLIDMGVDNGIVKKSGSWFTYEGDQLGQG 346
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLP 430
++KA +LR+NP + +EIE ++ + G + ++ P
Sbjct: 347 KEKARMHLRENPEIAQEIEVKIKKKLGVGEFAEVEDETDIDAP 389
>gi|399926367|ref|ZP_10783725.1| recombinase A [Myroides injenensis M09-0166]
Length = 334
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/326 (53%), Positives = 248/326 (76%), Gaps = 3/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V +LG +E SG L +DLALG GG PKGRI+EI+
Sbjct: 8 KLKALQLTLDKLDKTYGKGTVMKLGDTAIEEMEVISSGSLGIDLALGVGGYPKGRIIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LG+D++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAQKLGIDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIA+ + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ SK
Sbjct: 128 LEIAENLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTSTISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+ F+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR + +IK GD +G R +
Sbjct: 188 NCTVFFINQLRDKIGVMFGSPETTTGGNALKFYASVRVDIRKSTQIKD--GDNVIGNRTK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P++ AEF++++GEGVSK+G +LD A ++V + G+W+SYGD +LGQGRD
Sbjct: 246 VKIVKNKVAPPFRTAEFDVMYGEGVSKVGEILDLAVEYEVVKKSGSWFSYGDTKLGQGRD 305
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSD 415
++DNP L EE+E ++ ++ +
Sbjct: 306 AVKALIKDNPELMEELEVKIKEIIQN 331
>gi|398782012|ref|ZP_10545875.1| recombinase A [Streptomyces auratus AGR0001]
gi|396997028|gb|EJJ08004.1| recombinase A [Streptomyces auratus AGR0001]
Length = 373
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 246/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR++E+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERSKEPIEVIPTGSTALDVALGVGGLPRGRVIEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG+ +DAEHA DP Y+K LGVD ++LI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGSVAFIDAEHALDPEYAKKLGVDTDSLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEITDMLIRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KVS P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVSPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKSGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLADEIEKKIKEKLGIG 330
>gi|291436881|ref|ZP_06576271.1| recA [Streptomyces ghanaensis ATCC 14672]
gi|291339776|gb|EFE66732.1| recA [Streptomyces ghanaensis ATCC 14672]
Length = 373
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERSKEPIEVIPTGSTALDVALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|344199960|ref|YP_004784286.1| protein recA [Acidithiobacillus ferrivorans SS3]
gi|343775404|gb|AEM47960.1| Protein recA [Acidithiobacillus ferrivorans SS3]
Length = 348
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/342 (55%), Positives = 247/342 (72%), Gaps = 7/342 (2%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
R +AL AA++ I+ FGKG+V RLG + + +G L LDLALG GGLP+GR+VEI
Sbjct: 5 RSKALAAALSQIDKQFGKGAVMRLGDHNAIKDIAVYSTGSLGLDLALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LH IA Q GG A +DAEHA DPSY+ LGVD+ENL++ QPD GE
Sbjct: 65 YGPESSGKTTLTLHVIASCQAAGGTAAFIDAEHALDPSYAHKLGVDLENLLISQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+DLI +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N S+
Sbjct: 125 ALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANISR 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK K DE VG
Sbjct: 185 TNTLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--KSDEVVGNDT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++AEF I +GEG+S+L ++D DIV + GAWYS +R+GQG+
Sbjct: 243 RVKVVKNKVAPPFREAEFAIYYGEGISRLSELVDLGVKFDIVEKSGAWYSCQGERIGQGK 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLP 430
D A QYL+++P L IE+ +R+ + H +F +V P
Sbjct: 303 DNARQYLKEHPELAVNIEQRIRAAAAG---HPLAFAEDVVEP 341
>gi|167766689|ref|ZP_02438742.1| hypothetical protein CLOSS21_01195 [Clostridium sp. SS2/1]
gi|167711626|gb|EDS22205.1| RecA protein [Clostridium sp. SS2/1]
gi|291558369|emb|CBL37169.1| protein RecA [butyrate-producing bacterium SSC/2]
Length = 351
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/323 (54%), Positives = 246/323 (76%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I +GKGSV +LG +E P+G ++LD+ALG GG+PKGRI+E
Sbjct: 5 EKLKALDAALVKIEKDYGKGSVMKLGEYQADRTIEVTPTGSISLDIALGVGGVPKGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPD GE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
LEI + M RSGAID+I VDSV+AL P+AEI+G++G +GLQARLMSQALRK++G S
Sbjct: 125 QGLEITETMVRSGAIDIIIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTGVVS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K CT+IF+NQ+R K+GV +GNPE T+GG ALKF++S+RL++R T +K + E +G R
Sbjct: 185 KFNCTVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRLDVRRTETLK--QAGEMIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+KQAEF+I+FG+G+SK G +LD A DI+ + GAWY+Y +++GQG
Sbjct: 243 TRIKVVKNKVAPPFKQAEFDIMFGKGISKYGDILDLAADADIIHKSGAWYAYNGEKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ + +YL D+P + E +E +R
Sbjct: 303 RENSKKYLEDHPDIAETVEHAIR 325
>gi|114330801|ref|YP_747023.1| recombinase A [Nitrosomonas eutropha C91]
gi|122314264|sp|Q0AHX4.1|RECA_NITEC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|114307815|gb|ABI59058.1| RecA protein [Nitrosomonas eutropha C91]
Length = 343
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/324 (54%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +AL AA+ I +GKGS+ RLG + A ++ +G L+LD+ALG GGLP+GRI+E
Sbjct: 4 NKNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGRIIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L IAE+QKLGG A +DAEHA DP Y++ +GV+V+ L++ QPDNGE
Sbjct: 64 IYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSG++D++ +DSV+ALTPRAEIEGE+G Q+GLQARLMSQALRK++ N
Sbjct: 124 QALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGEPQMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+ T+IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG IK +G+E VG
Sbjct: 184 RTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIK--RGEEIVGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQA+F I++GEG+S+ +++ + ++ + GAWYSY +++GQG
Sbjct: 242 TRVKVVKNKVAPPFKQADFAILYGEGISRESEIIELGVLHKLIEKAGAWYSYNGEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
RD YL+++ L EIE+ +R+
Sbjct: 302 RDNVRDYLKEHKDLAHEIEQKIRA 325
>gi|262277415|ref|ZP_06055208.1| protein RecA [alpha proteobacterium HIMB114]
gi|262224518|gb|EEY74977.1| protein RecA [alpha proteobacterium HIMB114]
Length = 376
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/324 (55%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+Q+AL+AA+ I+ +FGKGSV +LG AL +E +G L+LD+ALG GGLPK RIVE
Sbjct: 18 DKQKALEAAIGQIDQNFGKGSVMKLGQKDQALDIEAISTGSLSLDIALGIGGLPKSRIVE 77
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLAL IAE QK GG VDAEHA DP+Y++ LGVD L++ QPD GE
Sbjct: 78 IYGPESSGKTTLALQVIAEAQKTGGVCAFVDAEHALDPTYARKLGVDTSELLISQPDTGE 137
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+ ++ VDSV+ALTPRAE+EG++G +GLQARLMSQALRK++G+ S
Sbjct: 138 QALEIADTLVRSGAVSVLVVDSVAALTPRAELEGDMGDTHVGLQARLMSQALRKLTGSIS 197
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +IF+NQIR KIGV +G+PE T+GG ALKF++SVR++IR G IK + DE +G +
Sbjct: 198 KSNTMVIFINQIRMKIGVMFGSPETTAGGNALKFYSSVRMDIRRIGAIK--EKDEIIGNQ 255
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+K EF+I++GEG+SK+G ++D +I+ + GAWYSY +++GQG
Sbjct: 256 TRVKVVKNKVAPPFKVVEFDIMYGEGISKMGELIDLGAKANIIEKSGAWYSYKGEKIGQG 315
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
++ A QYL++N + EIE +R+
Sbjct: 316 KENAKQYLKNNLNIAAEIEMAIRA 339
>gi|295810384|emb|CBL81076.1| recombinase A [Agrobacterium larrymoorei]
Length = 316
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/318 (58%), Positives = 243/318 (76%), Gaps = 4/318 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
+ +AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD GE
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + SK
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG +
Sbjct: 181 SKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGNQT 238
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQGR
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 389 DKALQYLRDNPLLQEEIE 406
+ A ++RDNP + EIE
Sbjct: 299 ENAKGFVRDNPAVANEIE 316
>gi|429198541|ref|ZP_19190362.1| RecA protein [Streptomyces ipomoeae 91-03]
gi|428665755|gb|EKX64957.1| RecA protein [Streptomyces ipomoeae 91-03]
Length = 376
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERSKEPIEVIPTGSTALDVALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y++ LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|407800325|ref|ZP_11147187.1| RecA [Oceaniovalibus guishaninsula JLT2003]
gi|407057554|gb|EKE43528.1| RecA [Oceaniovalibus guishaninsula JLT2003]
Length = 357
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 249/332 (75%), Gaps = 4/332 (1%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GG 139
D D R D+Q+ALD+A+ I FGKGS+ +LG E+ +G L LD+ALG GG
Sbjct: 8 DMADKRSGDKQKALDSALAQIERQFGKGSIMKLGGDNPLPDFESTSTGSLGLDIALGIGG 67
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
LPKGRIVEI+GPESSGKTTL LH +AE QK GG VDAEHA DP Y++ LGV+++ L+
Sbjct: 68 LPKGRIVEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYARRLGVNLDELL 127
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
+ QPD GE ALEI D + RSGA++L+ VDSV+ALTP++E+EG++G +G+ ARLMSQA+
Sbjct: 128 ISQPDTGEQALEIVDTLVRSGAVNLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAM 187
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK++G+ S++GC +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK
Sbjct: 188 RKLTGSISRSGCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGSIKDR- 246
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
DE VG + RV+V K+KV+ P+KQ EF+I++GEG+SK G +LD +V + G+W+SY
Sbjct: 247 -DEVVGNQTRVKVVKNKVAPPFKQVEFDIMYGEGISKAGELLDLGVKAGVVDKSGSWFSY 305
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
GD+R+GQGR+ A Q+LRDNP + +IE +R+
Sbjct: 306 GDERIGQGRENAKQFLRDNPAMAMQIEDKIRA 337
>gi|376316683|emb|CCG00068.1| recombinase A [uncultured Flavobacteriia bacterium]
Length = 341
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 252/330 (76%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL ++ ++ ++GKG+V RLG + VET +G +TLD +LG GGLPKGRIVE+
Sbjct: 5 EKEKALKLTLDKLDKAYGKGAVMRLGDSQVVEVETISTGSITLDASLGIGGLPKGRIVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHAIAE QK GG A +DAEHAFD +Y+K LGV+VE L++ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAIAEAQKQGGVAAFIDAEHAFDKAYAKNLGVNVEELLIAQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
AL+I + + RSGA+D+ +DSV+AL PR+E+EG++G ++GLQARLMSQA+RK++G +K
Sbjct: 125 ALDITEHLIRSGAVDICVIDSVAALVPRSELEGDMGDSKMGLQARLMSQAMRKLTGTINK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
GC IF+NQ+R KIGV +G+PE T+GG ALKF++SVRL+IR G IK DE G R
Sbjct: 185 TGCCCIFINQLRDKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKD--KDEITGNRT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+++AEF+I++GEG+SKLG ++D +DI+ + G+WYSYGD +LGQGR
Sbjct: 243 RVKVVKNKMAPPFRKAEFDIMYGEGISKLGEIIDLGVDLDILNKSGSWYSYGDTKLGQGR 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
+ L+DNP L EE+E +R ++ + +
Sbjct: 303 EGVKDLLKDNPELAEEVEGKIRGVLMNSEI 332
>gi|47678158|emb|CAF21842.1| RecA recombinase [Enterococcus sulfureus ATCC 49903]
Length = 344
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/329 (53%), Positives = 245/329 (74%), Gaps = 3/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKG+V +LG + T PSG L LD+ALG GG P+GRI+E+
Sbjct: 4 DRKAALDAALKKIEKNFGKGAVMKLGEKVDQQISTIPSGSLALDVALGVGGYPRGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y+ LGV++++L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKNGGTAAFIDAEHALDPKYASNLGVNIDDLLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D++ VDSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAVDMVVVDSVAALVPRAEIDGEMGASHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE T GG ALKF+A++RLE+R ++KS G + +G R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATIRLEVRRAEQLKS--GTDIIGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
++++ K+KV+ P++ AE +I++GEG+S++G +LD A MDI+ + GAWYSY R+GQGR
Sbjct: 242 KIKIVKNKVAPPFRIAEVDIMYGEGISQVGELLDMAAEMDIIDKSGAWYSYKGDRIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ QY++++P + EE+ VR G+
Sbjct: 302 ENVKQYMKEHPEMVEEVSARVRDAYGIGT 330
>gi|119716568|ref|YP_923533.1| recA protein [Nocardioides sp. JS614]
gi|166220661|sp|A1SJ61.1|RECA_NOCSJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|119537229|gb|ABL81846.1| RecA protein [Nocardioides sp. JS614]
Length = 350
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/322 (57%), Positives = 246/322 (76%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ +I FGKGSV RLG A +E PSG + LD+ALG GG P+GR+VEI
Sbjct: 5 DREKALDAALANIEKQFGKGSVMRLGDEVRAPLEIIPSGSIALDVALGLGGFPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG +DAEHA DP Y+K LGVD + L+V QPD+GE
Sbjct: 65 YGPESSGKTTVALHAVANAQRAGGIVAFIDAEHALDPDYAKNLGVDTDALLVSQPDSGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+G +
Sbjct: 125 ALEIADMLIRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T+IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G + VG R
Sbjct: 185 SKTTMIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGTDMVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D +V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDIMYGKGISREGGLIDVGVEAGLVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +LRDNP L E+EK +
Sbjct: 302 KENARAFLRDNPDLANELEKKI 323
>gi|302338561|ref|YP_003803767.1| recA protein [Spirochaeta smaragdinae DSM 11293]
gi|301635746|gb|ADK81173.1| recA protein [Spirochaeta smaragdinae DSM 11293]
Length = 381
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAG-GALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL+AA I FGKGS+ +LG +ET PSG + LD ALG GG PKGRIVE
Sbjct: 17 EKEKALEAARLQIEKQFGKGSLMKLGGENRQGNIETIPSGSILLDAALGVGGYPKGRIVE 76
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALHAIAE QK GG A +DAEHA DP Y++ LGV+++ + V QPD GE
Sbjct: 77 IYGPESSGKTTLALHAIAECQKQGGIAAFIDAEHALDPVYARNLGVNIDEMWVSQPDTGE 136
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGA+D+I VDSV+ALTP+AEIEG++G +GLQARLMSQALRK++G S
Sbjct: 137 QALEIAESLVRSGAVDIIVVDSVAALTPQAEIEGDMGDSHMGLQARLMSQALRKLTGIIS 196
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+G LIF+NQIR KIGV +GNPE T+GG ALKF++SVR+E+R I S DE +G R
Sbjct: 197 KSGACLIFINQIRMKIGVMFGNPETTTGGKALKFYSSVRIEVRRIETI-SKGADEAIGNR 255
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VR+++ K+KV+ P+K+AE EIIFG+G+S +LD A +++ + G+WYSYG++R+GQG
Sbjct: 256 VRIKIAKNKVAPPFKKAELEIIFGKGISASASLLDAALKFEVIQKSGSWYSYGEERIGQG 315
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
R+ A +L N + EEI+K VR ++
Sbjct: 316 RENAKLFLETNADVAEEIDKKVRVLL 341
>gi|374295835|ref|YP_005046026.1| protein RecA [Clostridium clariflavum DSM 19732]
gi|359825329|gb|AEV68102.1| protein RecA [Clostridium clariflavum DSM 19732]
Length = 352
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 249/324 (76%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++++AL+ A+ I FGKG+V RLG +ET P+G + LD+ALG GG+P+GRIV
Sbjct: 1 MIEKKKALEMALGQIEKQFGKGAVMRLGENTHMNIETIPTGAMGLDIALGVGGVPRGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+K LGV+++NLIV QPD G
Sbjct: 61 EIFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKNLGVNIDNLIVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGAID+I +DSV+AL P+AEI+GE+G +GLQARLMSQALRK+SG
Sbjct: 121 EQALEIAEALVRSGAIDVIVIDSVAALVPKAEIDGEMGDAHVGLQARLMSQALRKLSGVI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ T IF+NQ+R K+G+ +GNPE T GG ALKF++SVRL++R IK +G E +G
Sbjct: 181 NKSKTTAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRKIDSIK--QGTEIIGS 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R +V+V K+KV+ P+K+AEF+II+G+G+SK G +LD A +DIV + GAW+SY +Q++GQ
Sbjct: 239 RTKVKVVKNKVAPPFKEAEFDIIYGKGISKEGSILDVAVNLDIVNKSGAWFSYNNQKIGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L +NP + EIE +R
Sbjct: 299 GRENAKQFLMENPQILNEIENKIR 322
>gi|338738241|ref|YP_004675203.1| recombinase A [Hyphomicrobium sp. MC1]
gi|337758804|emb|CCB64629.1| recombinase A [Hyphomicrobium sp. MC1]
Length = 377
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 246/324 (75%), Gaps = 3/324 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+++AL+ A+ I+ +FGKGS+ RLG+ +E +G L LD+ALG GGLPKGRI+E
Sbjct: 14 MDKKQALEQALAQIDKTFGKGSIMRLGANEKLDIEAISTGSLGLDIALGIGGLPKGRIIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTTLAL IAE QK GG VDAEHA DP Y+K LGV VE+L++ QPD GE
Sbjct: 74 VYGPESSGKTTLALQVIAESQKKGGVCAFVDAEHAIDPGYAKKLGVKVEDLLISQPDTGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+ALTP+AE+EGE+G +G QARLMSQALRK++ + S
Sbjct: 134 QALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGEATMGAQARLMSQALRKLTASIS 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+A +IF+NQIR KIG+ +GNPE T+GG ALKF+ASVRL+IR G+IK + +E VG +
Sbjct: 194 RANTMVIFINQIRMKIGIMFGNPETTTGGNALKFYASVRLDIRRIGQIK--EREETVGNQ 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+SK+G ++D +V + GAW SY R+GQG
Sbjct: 252 TRVKVVKNKVAPPFKQVEFDIMYGEGISKVGELIDLGVKAGLVEKSGAWLSYNGDRIGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A YL++NP + EIE+ +R+
Sbjct: 312 RENAKTYLKENPRVAAEIERAIRA 335
>gi|47678134|emb|CAF21830.1| RecA recombinase [Enterococcus columbae DSM 7374 = ATCC 51263]
Length = 349
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 246/330 (74%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKG++ +LG + T PSG L LD+ALG GG P+GRI+E+
Sbjct: 4 DRKAALDAALKKIEKNFGKGAIMKLGEKADQQISTIPSGSLALDVALGVGGYPRGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP+Y+K LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKNGGTAAFIDAEHALDPAYAKKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D+I +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAVDVIVIDSVAALVPRAEIDGEMGDTHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE T GG ALKF+A++RLE+R + ++KS G + +G R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATIRLEVRRSEQLKS--GTDIIGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+S+ G +LD A +DI+ + GAWYSY R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKTAEIDIMYGEGISQEGELLDMAVDVDIIDKSGAWYSYKGDRIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
+ Y++++P + E+ +VR+ G V
Sbjct: 302 ENVKNYMKEHPEMVAEVSALVRNAYGIGDV 331
>gi|305665727|ref|YP_003862014.1| recombinase A [Maribacter sp. HTCC2170]
gi|88710486|gb|EAR02718.1| recombinase A [Maribacter sp. HTCC2170]
Length = 354
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 248/325 (76%), Gaps = 2/325 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G + VE PSG L LD+ALG GG P+GR++EI+
Sbjct: 28 KLKALKLTLDKLDKTYGKGAVMKMGDSVVEDVEVIPSGSLGLDIALGVGGYPRGRVIEIY 87
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LG+D++NLI+ QPDNGE A
Sbjct: 88 GPESSGKTTLTLHAIAEAQKNGGIAAFIDAEHAFDRFYAEKLGIDIDNLIISQPDNGEQA 147
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ VDSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G+ SK
Sbjct: 148 LEIADNLIRSGAIDIVVVDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGSISKT 207
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G G + R
Sbjct: 208 HCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDTDGAVR-GNKTR 266
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I++GEG+SK+G ++D +I+ + G+W+SYGD +LGQGRD
Sbjct: 267 VKVVKNKVAPPFRLAEFDIMYGEGISKVGEIIDLGVEYEIIKKSGSWFSYGDTKLGQGRD 326
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMS 414
L DNP L EE++ +R ++
Sbjct: 327 AVKALLNDNPELYEELDVKIREAIT 351
>gi|313884175|ref|ZP_07817941.1| RecA protein [Eremococcus coleocola ACS-139-V-Col8]
gi|312620622|gb|EFR32045.1| RecA protein [Eremococcus coleocola ACS-139-V-Col8]
Length = 346
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/328 (54%), Positives = 245/328 (74%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ+ALD A+ +I +FGKG++ +LG + T P+G L LD+ALG GG P+GRI+E
Sbjct: 5 ERQKALDLALKNIEKNFGKGAIMKLGEKTDTKISTIPTGSLALDVALGVGGYPRGRIIEC 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y+ LGVDV+ L++ QPD GE
Sbjct: 65 YGPESSGKTTVALHAIAEVQKQGGTAAFIDAEHALDPDYAANLGVDVDELLLSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D+I VDSV+AL PRAEIEG++G +GLQARLMSQALRK+SG+ +K
Sbjct: 125 GLEIADALVASGAVDIIVVDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKLSGSVNK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
F+NQIR K+G+ +GNPE T GG ALKF++++RLE+R IK+ E +G R
Sbjct: 185 TKTICFFINQIREKVGIMFGNPETTPGGRALKFYSTIRLEVRRAETIKN--SGEMIGNRT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+K+A +I++G+G+S+ G ++D A +DI+ + G+WYSYGD+R+GQGR
Sbjct: 243 RIKVVKNKVAPPFKEAMVDIMYGQGISQEGELVDMAADLDIINKAGSWYSYGDERIGQGR 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ A Q+L DNP ++EEI VR+ + G
Sbjct: 303 ENAKQFLIDNPAVREEINSKVRAHYNIG 330
>gi|377573148|ref|ZP_09802222.1| protein RecA [Mobilicoccus pelagius NBRC 104925]
gi|377538183|dbj|GAB47387.1| protein RecA [Mobilicoccus pelagius NBRC 104925]
Length = 367
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/340 (54%), Positives = 251/340 (73%), Gaps = 6/340 (1%)
Query: 80 SSDSGDSRFLD-RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+S + D + +D R ++LD M I ++GKG+V RLG + T P+G + LD+ALG
Sbjct: 6 TSTNADQKAMDQRVKSLDTVMAQIEKNYGKGAVMRLGDDVRPPIGTIPTGSVALDIALGI 65
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GGLP+GRIVEI+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+K LGVD +
Sbjct: 66 GGLPRGRIVEIYGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKKLGVDTDA 125
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
L+V QPD GE ALEIAD + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQ
Sbjct: 126 LLVSQPDTGEQALEIADMLIRSGALDIIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQ 185
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRK++G + G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I++
Sbjct: 186 ALRKLTGALNSTGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIET 242
Query: 318 VK-GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAW 376
+K G E VG R RV+V K+KVS P+KQAEF+I++G+G+S+ G +LD V + GAW
Sbjct: 243 LKDGTEPVGNRTRVKVVKNKVSPPFKQAEFDILYGQGISREGGLLDMGVEQGFVRKSGAW 302
Query: 377 YSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
Y+Y +LGQG++ A +L+DNP L +E+E+ + + + G
Sbjct: 303 YTYDGDQLGQGKENARNFLKDNPELTDELERKILTKLGIG 342
>gi|326776175|ref|ZP_08235440.1| recA protein [Streptomyces griseus XylebKG-1]
gi|326656508|gb|EGE41354.1| recA protein [Streptomyces griseus XylebKG-1]
Length = 374
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/322 (56%), Positives = 244/322 (75%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QKLGG+ +DAEHA DP Y+K LGVD+++LI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKLGGSVAFIDAEHALDPEYAKKLGVDIDSLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +L+DNP L EIEK +
Sbjct: 302 KENARNFLKDNPDLANEIEKKI 323
>gi|295396971|ref|ZP_06807092.1| recombination protein A [Aerococcus viridans ATCC 11563]
gi|294974788|gb|EFG50494.1| recombination protein A [Aerococcus viridans ATCC 11563]
Length = 363
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/361 (52%), Positives = 259/361 (71%), Gaps = 14/361 (3%)
Query: 79 FSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG- 137
+ D DS +RQ+ALD AM I +FGKGS+ ++G G + T P+G LTLD++LG
Sbjct: 1 MTMDKNDS---NRQKALDDAMKKIERNFGKGSIMKMGERGDTRISTVPTGSLTLDISLGV 57
Query: 138 GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVEN 197
GG P+GRI+E++GPESSGKTT++LHAIAEVQK GG A +DAE+A DP Y+ LGV+V+
Sbjct: 58 GGYPRGRIIEVYGPESSGKTTVSLHAIAEVQKRGGIAAFIDAENALDPEYAAKLGVNVDE 117
Query: 198 LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 257
L++ QPD GE LEIAD + SGAID+I VDSV+AL PRAEIEGE+G IGLQARLMSQ
Sbjct: 118 LLLSQPDTGEQGLEIADALVSSGAIDIIVVDSVAALVPRAEIEGEMGDSHIGLQARLMSQ 177
Query: 258 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 317
ALRK+SG +K IF+NQIR K+GV +G+PE T GG ALKF+++VRLE+R +IK
Sbjct: 178 ALRKLSGTINKTKTIAIFINQIREKVGVMFGSPETTPGGRALKFYSTVRLEVRRGEQIK- 236
Query: 318 VKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWY 377
+ +G R ++++ K+KV+ P+K AE +I++GEG+S+ G ++D A +DI+ + G+WY
Sbjct: 237 -ESGSAIGNRTKIKIVKNKVAPPFKVAEVDIMYGEGISQEGELVDLAAELDIINKSGSWY 295
Query: 378 SYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENIL 437
SYG+ R+GQGR+ A Q+LR+NP ++E I+ VR H G F +N L +E + L
Sbjct: 296 SYGEDRIGQGRENAKQFLRENPEIRETIDGQVRQ-------HFG-FGQNGKLSEEELDAL 347
Query: 438 E 438
E
Sbjct: 348 E 348
>gi|283481767|emb|CBA10138.1| recombinase A [Agrobacterium tumefaciens]
Length = 317
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/316 (59%), Positives = 241/316 (76%), Gaps = 4/316 (1%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFG 150
+AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIVEI+G
Sbjct: 2 KALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEIYG 61
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD GE AL
Sbjct: 62 PESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQAL 121
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + SK+
Sbjct: 122 EITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSK 181
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG + RV
Sbjct: 182 CMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGNQTRV 239
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQGR+
Sbjct: 240 KVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGREN 299
Query: 391 ALQYLRDNPLLQEEIE 406
A +LRDNP EIE
Sbjct: 300 AKTFLRDNPETANEIE 315
>gi|182435538|ref|YP_001823257.1| recombinase A [Streptomyces griseus subsp. griseus NBRC 13350]
gi|178464054|dbj|BAG18574.1| putative RecA protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 376
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/322 (56%), Positives = 244/322 (75%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QKLGG+ +DAEHA DP Y+K LGVD+++LI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKLGGSVAFIDAEHALDPEYAKKLGVDIDSLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +L+DNP L EIEK +
Sbjct: 302 KENARNFLKDNPDLANEIEKKI 323
>gi|392426451|ref|YP_006467445.1| protein RecA [Desulfosporosinus acidiphilus SJ4]
gi|391356414|gb|AFM42113.1| protein RecA [Desulfosporosinus acidiphilus SJ4]
Length = 343
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/338 (52%), Positives = 252/338 (74%), Gaps = 6/338 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +ALD A+ I FGKGS+ +LG + ++ P+G L LDLALG GG+P+GRI+EI
Sbjct: 5 NKLKALDVALAQIEKQFGKGSIMKLGESATMSIDVIPTGSLALDLALGVGGVPRGRIIEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH IAE QKLGG A +DAEHA DP Y+KALGV++E+L+V QPD GE
Sbjct: 65 YGPESSGKTTVALHIIAEAQKLGGVAAFIDAEHALDPVYAKALGVNLEDLLVSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEI + + RS A+D+I +DSV+AL PRAEIEGE+G +GL ARLMSQALRK++G+ SK
Sbjct: 125 GLEICEALVRSAAVDVIVLDSVAALVPRAEIEGEMGDNHVGLHARLMSQALRKLTGSISK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ ++F+NQIR KIGV +G+PE T+GG ALKF+A++R++IR +K +G E +G +
Sbjct: 185 SNTCVVFINQIREKIGVMFGSPETTTGGRALKFYATIRIDIRRQEALK--QGQEIIGNKT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+K AEF+I++GEG+SK G ++D M+I+ + GAWYSY +RLGQGR
Sbjct: 243 RIKVVKNKVAPPFKSAEFDIMYGEGISKEGSIVDIGTEMEIITKSGAWYSYNGERLGQGR 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS---DGSVHQGSF 423
+ +YL+ +P + ++E+++RS M+ + GSF
Sbjct: 303 ENVKEYLKQHPDMALKLEELIRSNMNAVPSAPIEDGSF 340
>gi|47678146|emb|CAF21836.1| RecA recombinase [Enterococcus pallens]
Length = 350
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 254/351 (72%), Gaps = 5/351 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+AAM I ++GKGS+ +LG + T PSG L LD+ALG GG P+GRI+EI
Sbjct: 4 DRKAALEAAMKKIEKNYGKGSIMKLGDKIDQQISTIPSGSLALDVALGVGGYPRGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKQGGTAAFIDAEHALDPQYAQHLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D+I +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAVDIIVIDSVAALVPRAEIDGEMGASHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+G+ +GNPE T GG ALKF+A+VRLE+R ++K+ G + VG R
Sbjct: 184 TKTIAVFINQIREKVGIMFGNPETTPGGRALKFYATVRLEVRRAEQLKN--GTDIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+S+ G +LD A DI+ + GAWYSY ++R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGQGISQEGELLDMAAEQDIIDKSGAWYSYKEERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
+ A +YL ++P + E+ VR+ G + +V P QEE LE+
Sbjct: 302 ENAKKYLAEHPDMTAEVSSRVRAAYGIGEPVE--VPEDVEEPGQEELPLED 350
>gi|160880571|ref|YP_001559539.1| recA protein [Clostridium phytofermentans ISDg]
gi|160429237|gb|ABX42800.1| recA protein [Clostridium phytofermentans ISDg]
Length = 347
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/324 (54%), Positives = 254/324 (78%), Gaps = 6/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +AL++A+ I +GKGSV +LG G + VET P+G ++LD+ALG GG+PKGR+VE
Sbjct: 5 DKIKALESALAQIEKQYGKGSVMKLGETGTRMNVETVPTGSISLDIALGLGGIPKGRVVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPDNGE
Sbjct: 65 VYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF++S+RL++R +I+++K G + VG
Sbjct: 185 KSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRLDVR---RIEALKLGGDIVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R R++V K+K++ P+K+AEF+I+FG+G+S+ G +LD A I+V+ GAWY+Y + ++GQ
Sbjct: 242 RTRIKVVKNKIAPPFKEAEFDIMFGQGISREGDILDLAANEGIIVKSGAWYAYNESKIGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +L++NP + EE+E VR
Sbjct: 302 GRENAKVFLKENPNILEEVEVQVR 325
>gi|189462741|ref|ZP_03011526.1| hypothetical protein BACCOP_03438 [Bacteroides coprocola DSM 17136]
gi|189430541|gb|EDU99525.1| RecA protein [Bacteroides coprocola DSM 17136]
Length = 348
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/351 (53%), Positives = 256/351 (72%), Gaps = 8/351 (2%)
Query: 66 KKISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETF 125
KK F+G V +S ++ +AL AAM+ I SFGKGS+ ++G VE
Sbjct: 3 KKDELAFEGGV-----ESPQPNNSEKLKALQAAMDKIEKSFGKGSIMKMGDNHVQEVEVI 57
Query: 126 PSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFD 184
P+G + L+ ALG GG PKGRI+EI+GPESSGKTTLA+HAIAE QK GG A +DAEHAFD
Sbjct: 58 PTGSIALNAALGVGGYPKGRIIEIYGPESSGKTTLAIHAIAEAQKAGGIAAFIDAEHAFD 117
Query: 185 PSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIG 244
Y+ LGVD++NL + QPDNGE ALEIA+++ RS AID+I +DSV+ALTP+AEIEG++G
Sbjct: 118 RFYAAKLGVDIDNLWISQPDNGEQALEIAEQLIRSSAIDIIVIDSVAALTPKAEIEGDMG 177
Query: 245 MQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS 304
++GLQARLMSQALRK++ SK T IF+NQ+R KIGV +GNPE T+GG ALKF+AS
Sbjct: 178 DNRVGLQARLMSQALRKLTSAISKTNTTCIFINQLREKIGVMFGNPETTTGGNALKFYAS 237
Query: 305 VRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCA 364
VRL+IR IK G++ +G + RV++ K+KV+ P+++AEF+I+FGEG+S+ G ++D
Sbjct: 238 VRLDIRKGQPIKD--GEDIIGNQTRVKIVKNKVAPPFRKAEFDIMFGEGISRSGEIIDLG 295
Query: 365 EMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSD 415
+ I+ + G+WYSY + +LGQGRD A Q ++DNP L EE+E ++ + + D
Sbjct: 296 AELGIIKKSGSWYSYNETKLGQGRDAAKQCIQDNPELAEELEGLIFTALKD 346
>gi|302382290|ref|YP_003818113.1| recA protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192918|gb|ADL00490.1| recA protein [Brevundimonas subvibrioides ATCC 15264]
Length = 367
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/327 (56%), Positives = 247/327 (75%), Gaps = 4/327 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGA-LVETFPSGCLTLDLALG-GGLPKGRIVE 147
D+QRAL+AA+ I+ +FGKGSV +LG G A ++ + +G L LD+ALG GGLP+GR++E
Sbjct: 23 DKQRALEAAIAQIDRAFGKGSVMKLGKGGIADVIPSVSTGSLGLDMALGIGGLPRGRVIE 82
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
+FGPESSGKTTLALH +AE+QK GG A VDAEHA DP Y++ LGV++++L+V QPD GE
Sbjct: 83 VFGPESSGKTTLALHTVAEIQKSGGTAAFVDAEHALDPGYAQKLGVNLDDLLVSQPDTGE 142
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + S
Sbjct: 143 QALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASIS 202
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C ++F+NQIR+KIGV YG+PE T+GG ALKF+ASVRL+IR TG IK DE VG
Sbjct: 203 KSNCIVLFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGAIKDR--DEVVGNT 260
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+++ F+I++GEG+SKLG ++D I+ + G+W+SY R+GQG
Sbjct: 261 TRVKVVKNKVAPPFREVIFDIMYGEGISKLGEIIDLGVKAGIIEKSGSWFSYDSTRIGQG 320
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMS 414
R+ +L+ NP + IE VR S
Sbjct: 321 RENVRAFLKANPDMAAAIEDKVRKSTS 347
>gi|260591294|ref|ZP_05856752.1| protein RecA [Prevotella veroralis F0319]
gi|260536660|gb|EEX19277.1| protein RecA [Prevotella veroralis F0319]
Length = 339
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 242/324 (74%), Gaps = 3/324 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL AAM+ I FGKGS+ R+G V+ P+G +TLD ALG GG P+GRI+EI+GP
Sbjct: 15 KALQAAMSKIEKDFGKGSIMRMGDEQIENVDVIPTGSVTLDTALGVGGYPRGRIIEIYGP 74
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTLA+HAIAE QK GG A +DAEHAFD Y++ LGVDV+NL + QPDNGE ALE
Sbjct: 75 ESSGKTTLAIHAIAEAQKQGGIAAFIDAEHAFDRFYAEKLGVDVDNLWISQPDNGEQALE 134
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD++ RS AID++ VDSV+ALTP+ EIEG++G +GLQARLMSQALRK++ SK
Sbjct: 135 IADQLIRSSAIDILVVDSVAALTPKKEIEGDMGDSAVGLQARLMSQALRKLTSTISKTNT 194
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
IF+NQ+R KIGV +GNPE T+GG ALKF++SVRL+IR IK+ GD+ +G +VRV+
Sbjct: 195 CCIFINQLREKIGVMFGNPETTTGGNALKFYSSVRLDIRRVTSIKN--GDQVIGNQVRVK 252
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
+ K+KV+ P+++AEFEI FGEG+SK+G ++D +I+ + G+W+SY +L QGRD
Sbjct: 253 IVKNKVAPPFRKAEFEITFGEGISKIGEIVDLGVQYNIIQKSGSWFSYNGTKLAQGRDAT 312
Query: 392 LQYLRDNPLLQEEIEKVVRSMMSD 415
L+DNP L EEIE +++ + D
Sbjct: 313 KTMLKDNPELAEEIEGLIKQAIVD 336
>gi|350564305|ref|ZP_08933123.1| recA protein [Thioalkalimicrobium aerophilum AL3]
gi|349777783|gb|EGZ32145.1| recA protein [Thioalkalimicrobium aerophilum AL3]
Length = 347
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/326 (55%), Positives = 245/326 (75%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++Q+AL AA+ I FGKGS+ R+G S +E +G L LD+ALG GGLPKGR++E
Sbjct: 4 NKQKALAAALGQIEKQFGKGSIMRMGDSTASRDIEAISTGSLGLDIALGIGGLPKGRVIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LHAIAE QK GG A VDAEHA DPSY++ LGVDV+NL+V QPD GE
Sbjct: 64 IYGPESSGKTTLTLHAIAEAQKKGGVAAFVDAEHALDPSYAEKLGVDVDNLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSG +D++ +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N
Sbjct: 124 QALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK KG+E +G
Sbjct: 184 RTNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIK--KGEEILGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+S+ G ++D ++ + G+WYSY +++GQG
Sbjct: 242 TRVKVVKNKVAPPFKQVEFDILYGEGISREGEIIDLGVKEGLIDKAGSWYSYNGEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+D QYL+DNP + E ++ +++ +
Sbjct: 302 KDNVRQYLKDNPAVSEGLQTELKARL 327
>gi|312195020|ref|YP_004015081.1| recA protein [Frankia sp. EuI1c]
gi|311226356|gb|ADP79211.1| recA protein [Frankia sp. EuI1c]
Length = 345
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 244/326 (74%), Gaps = 5/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +ALD A+ I+ FGKGSV RLG A ++ P+G + LD+ALG GGLP+GRI+EI
Sbjct: 5 DRDKALDNALAQIDKQFGKGSVMRLGDETRAPIQAIPTGSIALDVALGIGGLPRGRIIEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q GG A +DAEHA DP Y+ LGVD +NL+V QPD GE
Sbjct: 65 YGPESSGKTTVALHAVASAQAAGGIAAFIDAEHALDPDYAGKLGVDTDNLLVSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+G S
Sbjct: 125 ALEIADLLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALSN 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G + VG R
Sbjct: 185 SNTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGADAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++ AEF+I++G G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFRTAEFDIVYGGGISREGSLIDMGVEHAIIRKSGAWYTYDGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
++ A +LRDNP L +EIEK ++ +
Sbjct: 302 KENARNFLRDNPDLADEIEKRIKEKL 327
>gi|89894689|ref|YP_518176.1| hypothetical protein DSY1943 [Desulfitobacterium hafniense Y51]
gi|423074673|ref|ZP_17063398.1| RecA protein [Desulfitobacterium hafniense DP7]
gi|89334137|dbj|BAE83732.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361854362|gb|EHL06433.1| RecA protein [Desulfitobacterium hafniense DP7]
Length = 346
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/330 (55%), Positives = 253/330 (76%), Gaps = 4/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALD A++ I FGKGS+ RLG A + VE P+GCL +D+ALG GG+P+GR++E
Sbjct: 5 DKLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRVIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH AE QKLGG A +DAEHA DP Y+KALGV+++NL+V QPD GE
Sbjct: 65 IYGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLVSQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + + RSGAID+I +DSV+AL PRAEIEGE+G +GL ARLMSQALRK++G S
Sbjct: 125 QALEICEALVRSGAIDVIIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +IF+NQIR K+G+ +GNPE T+GG ALKF+ASVRLE+R +K +G + +G R
Sbjct: 185 KSNTCVIFINQIREKVGIMFGNPETTTGGRALKFYASVRLEVRRADTLK--QGQDMIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
+V+V K+KV+ P+KQAEF+I++GEG+S+ G M+D +DI+ + GAWYSY +RLGQG
Sbjct: 243 TKVKVVKNKVAPPFKQAEFDIMYGEGISREGSMVDVGAELDIINKSGAWYSYKGERLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
R+ ++L+ NP + EIE+ +R+ +++ S
Sbjct: 303 RENVKEFLKKNPEIAAEIEQGIRASIANVS 332
>gi|29377621|ref|NP_816775.1| recombinase A [Enterococcus faecalis V583]
gi|227517221|ref|ZP_03947270.1| recombination protein A [Enterococcus faecalis TX0104]
gi|227554589|ref|ZP_03984636.1| recombination protein A [Enterococcus faecalis HH22]
gi|229547403|ref|ZP_04436128.1| recombination protein A [Enterococcus faecalis TX1322]
gi|229547976|ref|ZP_04436701.1| recombination protein A [Enterococcus faecalis ATCC 29200]
gi|255970636|ref|ZP_05421222.1| recombinase A [Enterococcus faecalis T1]
gi|255974216|ref|ZP_05424802.1| recombinase A [Enterococcus faecalis T2]
gi|256761011|ref|ZP_05501591.1| recombinase A [Enterococcus faecalis T3]
gi|256854839|ref|ZP_05560203.1| recombinase A [Enterococcus faecalis T8]
gi|256958446|ref|ZP_05562617.1| protein recA [Enterococcus faecalis DS5]
gi|256960511|ref|ZP_05564682.1| recA [Enterococcus faecalis Merz96]
gi|256963004|ref|ZP_05567175.1| recA [Enterococcus faecalis HIP11704]
gi|257078242|ref|ZP_05572603.1| recA [Enterococcus faecalis JH1]
gi|257080437|ref|ZP_05574798.1| recombinase A [Enterococcus faecalis E1Sol]
gi|257083159|ref|ZP_05577520.1| recA [Enterococcus faecalis Fly1]
gi|257088275|ref|ZP_05582636.1| RecA/RadA recombinase [Enterococcus faecalis D6]
gi|257091406|ref|ZP_05585767.1| recombinase recA [Enterococcus faecalis CH188]
gi|257418010|ref|ZP_05595004.1| recombinase A recA [Enterococcus faecalis T11]
gi|257420388|ref|ZP_05597378.1| recombinase recA [Enterococcus faecalis X98]
gi|293385293|ref|ZP_06631109.1| protein RecA [Enterococcus faecalis R712]
gi|293389694|ref|ZP_06634138.1| protein RecA [Enterococcus faecalis S613]
gi|294779161|ref|ZP_06744571.1| RecA protein [Enterococcus faecalis PC1.1]
gi|300861650|ref|ZP_07107734.1| protein RecA [Enterococcus faecalis TUSoD Ef11]
gi|307270513|ref|ZP_07551811.1| protein RecA [Enterococcus faecalis TX4248]
gi|307273670|ref|ZP_07554898.1| protein RecA [Enterococcus faecalis TX0855]
gi|307276602|ref|ZP_07557720.1| protein RecA [Enterococcus faecalis TX2134]
gi|307284801|ref|ZP_07564957.1| protein RecA [Enterococcus faecalis TX0860]
gi|307288392|ref|ZP_07568384.1| protein RecA [Enterococcus faecalis TX0109]
gi|307292190|ref|ZP_07572054.1| protein RecA [Enterococcus faecalis TX0411]
gi|312902017|ref|ZP_07761279.1| protein RecA [Enterococcus faecalis TX0470]
gi|312905475|ref|ZP_07764589.1| protein RecA [Enterococcus faecalis TX0635]
gi|312906644|ref|ZP_07765644.1| protein RecA [Enterococcus faecalis DAPTO 512]
gi|312910895|ref|ZP_07769730.1| protein RecA [Enterococcus faecalis DAPTO 516]
gi|312953274|ref|ZP_07772118.1| protein RecA [Enterococcus faecalis TX0102]
gi|384514403|ref|YP_005709496.1| recombination protein A [Enterococcus faecalis OG1RF]
gi|384516967|ref|YP_005704272.1| recombination protein A [Enterococcus faecalis 62]
gi|397701312|ref|YP_006539100.1| recombination protein A [Enterococcus faecalis D32]
gi|422686951|ref|ZP_16745141.1| protein RecA [Enterococcus faecalis TX4000]
gi|422689903|ref|ZP_16747993.1| protein RecA [Enterococcus faecalis TX0630]
gi|422692484|ref|ZP_16750505.1| protein RecA [Enterococcus faecalis TX0031]
gi|422696018|ref|ZP_16753995.1| protein RecA [Enterococcus faecalis TX4244]
gi|422698559|ref|ZP_16756451.1| protein RecA [Enterococcus faecalis TX1346]
gi|422700391|ref|ZP_16758238.1| protein RecA [Enterococcus faecalis TX1342]
gi|422704148|ref|ZP_16761963.1| protein RecA [Enterococcus faecalis TX1302]
gi|422708069|ref|ZP_16765603.1| protein RecA [Enterococcus faecalis TX0043]
gi|422711209|ref|ZP_16768142.1| protein RecA [Enterococcus faecalis TX0027]
gi|422713824|ref|ZP_16770572.1| protein RecA [Enterococcus faecalis TX0309A]
gi|422718551|ref|ZP_16775204.1| protein RecA [Enterococcus faecalis TX0309B]
gi|422720904|ref|ZP_16777511.1| protein RecA [Enterococcus faecalis TX0017]
gi|422723496|ref|ZP_16780031.1| protein RecA [Enterococcus faecalis TX2137]
gi|422725495|ref|ZP_16781955.1| protein RecA [Enterococcus faecalis TX0312]
gi|422728635|ref|ZP_16785043.1| protein RecA [Enterococcus faecalis TX0012]
gi|422732761|ref|ZP_16789090.1| protein RecA [Enterococcus faecalis TX0645]
gi|422736098|ref|ZP_16792363.1| protein RecA [Enterococcus faecalis TX1341]
gi|422740011|ref|ZP_16795168.1| protein RecA [Enterococcus faecalis TX2141]
gi|422867032|ref|ZP_16913635.1| RecA protein [Enterococcus faecalis TX1467]
gi|424673538|ref|ZP_18110479.1| RecA protein [Enterococcus faecalis 599]
gi|424677425|ref|ZP_18114277.1| RecA protein [Enterococcus faecalis ERV103]
gi|424680959|ref|ZP_18117755.1| RecA protein [Enterococcus faecalis ERV116]
gi|424685208|ref|ZP_18121908.1| RecA protein [Enterococcus faecalis ERV129]
gi|424688673|ref|ZP_18125278.1| RecA protein [Enterococcus faecalis ERV25]
gi|424690646|ref|ZP_18127178.1| RecA protein [Enterococcus faecalis ERV31]
gi|424694381|ref|ZP_18130784.1| RecA protein [Enterococcus faecalis ERV37]
gi|424697891|ref|ZP_18134203.1| RecA protein [Enterococcus faecalis ERV41]
gi|424701445|ref|ZP_18137617.1| RecA protein [Enterococcus faecalis ERV62]
gi|424704604|ref|ZP_18140699.1| RecA protein [Enterococcus faecalis ERV63]
gi|424711733|ref|ZP_18143945.1| RecA protein [Enterococcus faecalis ERV65]
gi|424716511|ref|ZP_18145822.1| RecA protein [Enterococcus faecalis ERV68]
gi|424722027|ref|ZP_18151094.1| RecA protein [Enterococcus faecalis ERV72]
gi|424724655|ref|ZP_18153593.1| RecA protein [Enterococcus faecalis ERV73]
gi|424727636|ref|ZP_18156265.1| RecA protein [Enterococcus faecalis ERV81]
gi|424744419|ref|ZP_18172713.1| RecA protein [Enterococcus faecalis ERV85]
gi|424753833|ref|ZP_18181762.1| RecA protein [Enterococcus faecalis ERV93]
gi|424759117|ref|ZP_18186790.1| RecA protein [Enterococcus faecalis R508]
gi|428768276|ref|YP_007154387.1| recA family protein [Enterococcus faecalis str. Symbioflor 1]
gi|430361217|ref|ZP_19426557.1| protein recA [Enterococcus faecalis OG1X]
gi|430372324|ref|ZP_19429711.1| hypothetical protein EFM7_2498 [Enterococcus faecalis M7]
gi|30179884|sp|P42444.2|RECA_ENTFA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|29345089|gb|AAO82845.1| recA protein [Enterococcus faecalis V583]
gi|227075318|gb|EEI13281.1| recombination protein A [Enterococcus faecalis TX0104]
gi|227176266|gb|EEI57238.1| recombination protein A [Enterococcus faecalis HH22]
gi|229306852|gb|EEN72848.1| recombination protein A [Enterococcus faecalis ATCC 29200]
gi|229307435|gb|EEN73422.1| recombination protein A [Enterococcus faecalis TX1322]
gi|255961654|gb|EET94130.1| recombinase A [Enterococcus faecalis T1]
gi|255967088|gb|EET97710.1| recombinase A [Enterococcus faecalis T2]
gi|256682262|gb|EEU21957.1| recombinase A [Enterococcus faecalis T3]
gi|256710399|gb|EEU25443.1| recombinase A [Enterococcus faecalis T8]
gi|256948942|gb|EEU65574.1| protein recA [Enterococcus faecalis DS5]
gi|256951007|gb|EEU67639.1| recA [Enterococcus faecalis Merz96]
gi|256953500|gb|EEU70132.1| recA [Enterococcus faecalis HIP11704]
gi|256986272|gb|EEU73574.1| recA [Enterococcus faecalis JH1]
gi|256988467|gb|EEU75769.1| recombinase A [Enterococcus faecalis E1Sol]
gi|256991189|gb|EEU78491.1| recA [Enterococcus faecalis Fly1]
gi|256996305|gb|EEU83607.1| RecA/RadA recombinase [Enterococcus faecalis D6]
gi|257000218|gb|EEU86738.1| recombinase recA [Enterococcus faecalis CH188]
gi|257159838|gb|EEU89798.1| recombinase A recA [Enterococcus faecalis T11]
gi|257162212|gb|EEU92172.1| recombinase recA [Enterococcus faecalis X98]
gi|291077493|gb|EFE14857.1| protein RecA [Enterococcus faecalis R712]
gi|291080941|gb|EFE17904.1| protein RecA [Enterococcus faecalis S613]
gi|294453794|gb|EFG22186.1| RecA protein [Enterococcus faecalis PC1.1]
gi|300849111|gb|EFK76864.1| protein RecA [Enterococcus faecalis TUSoD Ef11]
gi|306496696|gb|EFM66249.1| protein RecA [Enterococcus faecalis TX0411]
gi|306500692|gb|EFM70017.1| protein RecA [Enterococcus faecalis TX0109]
gi|306503060|gb|EFM72317.1| protein RecA [Enterococcus faecalis TX0860]
gi|306506712|gb|EFM75864.1| protein RecA [Enterococcus faecalis TX2134]
gi|306509683|gb|EFM78725.1| protein RecA [Enterococcus faecalis TX0855]
gi|306513094|gb|EFM81728.1| protein RecA [Enterococcus faecalis TX4248]
gi|310627292|gb|EFQ10575.1| protein RecA [Enterococcus faecalis DAPTO 512]
gi|310628779|gb|EFQ12062.1| protein RecA [Enterococcus faecalis TX0102]
gi|310631204|gb|EFQ14487.1| protein RecA [Enterococcus faecalis TX0635]
gi|311288763|gb|EFQ67319.1| protein RecA [Enterococcus faecalis DAPTO 516]
gi|311290953|gb|EFQ69509.1| protein RecA [Enterococcus faecalis TX0470]
gi|315026529|gb|EFT38461.1| protein RecA [Enterococcus faecalis TX2137]
gi|315028305|gb|EFT40237.1| protein RecA [Enterococcus faecalis TX4000]
gi|315031853|gb|EFT43785.1| protein RecA [Enterococcus faecalis TX0017]
gi|315034874|gb|EFT46806.1| protein RecA [Enterococcus faecalis TX0027]
gi|315144204|gb|EFT88220.1| protein RecA [Enterococcus faecalis TX2141]
gi|315146532|gb|EFT90548.1| protein RecA [Enterococcus faecalis TX4244]
gi|315150789|gb|EFT94805.1| protein RecA [Enterococcus faecalis TX0012]
gi|315152843|gb|EFT96859.1| protein RecA [Enterococcus faecalis TX0031]
gi|315154590|gb|EFT98606.1| protein RecA [Enterococcus faecalis TX0043]
gi|315159538|gb|EFU03555.1| protein RecA [Enterococcus faecalis TX0312]
gi|315161295|gb|EFU05312.1| protein RecA [Enterococcus faecalis TX0645]
gi|315164370|gb|EFU08387.1| protein RecA [Enterococcus faecalis TX1302]
gi|315167043|gb|EFU11060.1| protein RecA [Enterococcus faecalis TX1341]
gi|315171149|gb|EFU15166.1| protein RecA [Enterococcus faecalis TX1342]
gi|315172879|gb|EFU16896.1| protein RecA [Enterococcus faecalis TX1346]
gi|315573192|gb|EFU85383.1| protein RecA [Enterococcus faecalis TX0309B]
gi|315577071|gb|EFU89262.1| protein RecA [Enterococcus faecalis TX0630]
gi|315581306|gb|EFU93497.1| protein RecA [Enterococcus faecalis TX0309A]
gi|323479100|gb|ADX78539.1| recombination protein A [Enterococcus faecalis 62]
gi|327536292|gb|AEA95126.1| recombination protein A [Enterococcus faecalis OG1RF]
gi|329577821|gb|EGG59244.1| RecA protein [Enterococcus faecalis TX1467]
gi|397337951|gb|AFO45623.1| recombination protein A [Enterococcus faecalis D32]
gi|402352221|gb|EJU87074.1| RecA protein [Enterococcus faecalis 599]
gi|402352346|gb|EJU87197.1| RecA protein [Enterococcus faecalis ERV116]
gi|402354457|gb|EJU89264.1| RecA protein [Enterococcus faecalis ERV103]
gi|402359189|gb|EJU93831.1| RecA protein [Enterococcus faecalis ERV129]
gi|402360015|gb|EJU94630.1| RecA protein [Enterococcus faecalis ERV25]
gi|402363673|gb|EJU98139.1| RecA protein [Enterococcus faecalis ERV31]
gi|402370875|gb|EJV05062.1| RecA protein [Enterococcus faecalis ERV37]
gi|402371476|gb|EJV05633.1| RecA protein [Enterococcus faecalis ERV62]
gi|402374276|gb|EJV08308.1| RecA protein [Enterococcus faecalis ERV41]
gi|402381626|gb|EJV15329.1| RecA protein [Enterococcus faecalis ERV63]
gi|402382943|gb|EJV16569.1| RecA protein [Enterococcus faecalis ERV65]
gi|402387918|gb|EJV21375.1| RecA protein [Enterococcus faecalis ERV68]
gi|402389941|gb|EJV23316.1| RecA protein [Enterococcus faecalis ERV72]
gi|402394075|gb|EJV27271.1| RecA protein [Enterococcus faecalis ERV73]
gi|402396106|gb|EJV29180.1| RecA protein [Enterococcus faecalis ERV81]
gi|402398954|gb|EJV31856.1| RecA protein [Enterococcus faecalis ERV85]
gi|402403502|gb|EJV36168.1| RecA protein [Enterococcus faecalis ERV93]
gi|402405089|gb|EJV37690.1| RecA protein [Enterococcus faecalis R508]
gi|427186449|emb|CCO73673.1| recA family protein [Enterococcus faecalis str. Symbioflor 1]
gi|429512565|gb|ELA02169.1| protein recA [Enterococcus faecalis OG1X]
gi|429514668|gb|ELA04205.1| hypothetical protein EFM7_2498 [Enterococcus faecalis M7]
Length = 348
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/332 (53%), Positives = 247/332 (74%), Gaps = 5/332 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKGS+ +LG + T PSG L LD+ALG GG P+GRI+E+
Sbjct: 4 DRKVALDAALKKIEKNFGKGSIMKLGEKADQKISTIPSGSLALDVALGVGGYPRGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHAIAEVQ+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVSLHAIAEVQRNGGTAAFIDAEHALDPQYAEKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGAID++ +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAIDIVVIDSVAALVPRAEIDGEMGASHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE T GG ALKF+A+VRLE+R ++K +G + VG R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQLK--QGTDIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+S+ G +LD A D++ + GAWY Y ++R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGQGISQEGELLDMAVEKDLISKSGAWYGYKEERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSM--MSDGSV 418
+ A QY+ D+P + E+ K+VR + DGS
Sbjct: 302 ENAKQYMADHPEMMAEVSKLVRDAYGIGDGST 333
>gi|300784251|ref|YP_003764542.1| recombination protein RecA [Amycolatopsis mediterranei U32]
gi|384147515|ref|YP_005530331.1| recombination protein RecA [Amycolatopsis mediterranei S699]
gi|399536136|ref|YP_006548798.1| recombination protein RecA [Amycolatopsis mediterranei S699]
gi|11387038|sp|Q9REV6.1|RECA_AMYMU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|6606547|gb|AAF19203.1|AF208682_1 recombination repairing protein [Amycolatopsis mediterranei U32]
gi|299793765|gb|ADJ44140.1| recombination protein RecA [Amycolatopsis mediterranei U32]
gi|340525669|gb|AEK40874.1| recombination protein RecA [Amycolatopsis mediterranei S699]
gi|398316906|gb|AFO75853.1| recombination protein RecA [Amycolatopsis mediterranei S699]
Length = 348
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 252/343 (73%), Gaps = 5/343 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL+ A+ I+ +GKGSV RLG G A + P+G + LD+ALG GGLP+GR++E+
Sbjct: 6 DKDKALELALAQIDKQYGKGSVMRLGEEGRAPIAVIPTGAIALDVALGIGGLPRGRVIEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQRNGGIAAFIDAEHALDPDYAKKLGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+G +
Sbjct: 126 ALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGAMNN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 186 SGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGGEAVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKMAPPFKQAEFDILYGHGISREGSLIDMGVDQAILRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLP 430
++ A ++LRDNP + EIEK ++ + G+ + V P
Sbjct: 303 KENARKFLRDNPDIANEIEKRIKEKLGIGAQLDAEAVEAVPAP 345
>gi|337757325|emb|CCA61584.1| recombinase A [Agrobacterium vitis]
Length = 319
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/318 (58%), Positives = 245/318 (77%), Gaps = 4/318 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
+ +AL+AA++ I SFGKGS+ +LG+ + VET +G L+LD+ALG GGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++NL++ QPD GE
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGAID++ +DSV+ALTP+AEIEGE+G G+QARLMSQALRK++G+ S+
Sbjct: 121 ALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTGSISR 180
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C ++F+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K +E VG +
Sbjct: 181 SNCMVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKD--REEIVGNQT 238
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQGR
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKAGAWFSYNSQRLGQGR 298
Query: 389 DKALQYLRDNPLLQEEIE 406
+ A +LRDNP + +EIE
Sbjct: 299 ENAKIFLRDNPAVADEIE 316
>gi|219669130|ref|YP_002459565.1| recA protein [Desulfitobacterium hafniense DCB-2]
gi|219539390|gb|ACL21129.1| recA protein [Desulfitobacterium hafniense DCB-2]
Length = 346
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/330 (55%), Positives = 253/330 (76%), Gaps = 4/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALD A++ I FGKGS+ RLG A + VE P+GCL +D+ALG GG+P+GR++E
Sbjct: 5 DKLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRVIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH AE QKLGG A +DAEHA DP Y+KALGV+++NL+V QPD GE
Sbjct: 65 IYGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLVSQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + + RSGAID+I +DSV+AL PRAEIEGE+G +GL ARLMSQALRK++G S
Sbjct: 125 QALEICEALVRSGAIDVIIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +IF+NQIR K+G+ +GNPE T+GG ALKF+ASVRLE+R +K +G + +G R
Sbjct: 185 KSNTCVIFINQIREKVGIMFGNPETTTGGRALKFYASVRLEVRRADTLK--QGQDMIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
+V+V K+KV+ P+KQAEF+I++GEG+S+ G M+D +DI+ + GAWYSY +RLGQG
Sbjct: 243 TKVKVVKNKVAPPFKQAEFDIMYGEGISREGSMVDVGAELDIINKSGAWYSYKGERLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
R+ ++L+ NP + EIE+ +R+ +++ S
Sbjct: 303 RENVKEFLKKNPEIAAEIEQGIRASIANVS 332
>gi|387127527|ref|YP_006296132.1| recombinase A [Methylophaga sp. JAM1]
gi|386274589|gb|AFI84487.1| RecA protein [Methylophaga sp. JAM1]
Length = 346
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 247/326 (75%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I FGKG+V RLG ++ +G + LD+ALG GGLP+GR+VE
Sbjct: 4 NKKKALGAALGQIEKQFGKGAVMRLGDGTAHRDIDAVSTGSIGLDVALGIGGLPRGRVVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LHAIAE+QKLGG A VDAEHA DP Y++ LGV++++L+V QPD GE
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKLGGTAAFVDAEHALDPLYAEKLGVNIDDLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTP+AEIEG++G +GLQARLMSQALRK++ N
Sbjct: 124 QALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 184 RSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--KGDEILGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+S+ G ++D +IV + GAWYSY R+GQG
Sbjct: 242 TRVKVVKNKVAPPFKQVEFDILYGEGISREGELIDLGVSENIVEKSGAWYSYDGNRIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+D YL+++P + ++IE +R++M
Sbjct: 302 KDNVRIYLKEHPEMAKDIEAKIRAVM 327
>gi|218780785|ref|YP_002432103.1| recA protein [Desulfatibacillum alkenivorans AK-01]
gi|218762169|gb|ACL04635.1| recA protein [Desulfatibacillum alkenivorans AK-01]
Length = 353
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 247/328 (75%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +ALD A++ I FGKGSV +LG V P+G + LDLALG GGLP+GRIVEI
Sbjct: 6 DKTKALDTAISQIERQFGKGSVMKLGDQVAMKVPVIPTGSIALDLALGIGGLPRGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALHA+AE Q GG A VDAEHA D SY+K LGV+ + L+V QPD GE
Sbjct: 66 YGPESSGKTTLALHAVAEAQARGGVAAFVDAEHALDVSYAKKLGVNCDELLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++G +K
Sbjct: 126 ALEIADMLVRSGAVDILVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGTINK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
LIF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK +G E VG R
Sbjct: 186 TRTCLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--EGTESVGNRA 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+VRV K+K++ P+K+AEF++++GEG+SK G +LD ++I+ + GAWYS+ +R+GQGR
Sbjct: 244 KVRVVKNKMAPPFKEAEFDVMYGEGISKTGDLLDAGVNLEIIDKSGAWYSFDGERIGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ ++ ++NP + ++ K++R+ + G
Sbjct: 304 ENVKRFFKENPDVYDKALKMIRNKLGIG 331
>gi|207366350|emb|CAQ58070.1| recombinase A [Agrobacterium tumefaciens]
Length = 316
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/316 (59%), Positives = 241/316 (76%), Gaps = 4/316 (1%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFG 150
+AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRIVEI+G
Sbjct: 1 KALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEIYG 60
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD GE AL
Sbjct: 61 PESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQAL 120
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + SK+
Sbjct: 121 EITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSK 180
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG + RV
Sbjct: 181 CMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--EREEVVGNQTRV 238
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQGR+
Sbjct: 239 KVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGREN 298
Query: 391 ALQYLRDNPLLQEEIE 406
A +LRDNP EIE
Sbjct: 299 AKTFLRDNPETANEIE 314
>gi|257417292|ref|ZP_05594286.1| RecA recombinase [Enterococcus faecalis ARO1/DG]
gi|257159120|gb|EEU89080.1| RecA recombinase [Enterococcus faecalis ARO1/DG]
Length = 348
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/332 (53%), Positives = 247/332 (74%), Gaps = 5/332 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKGS+ +LG + T PSG L LD+ALG GG P+GRI+E+
Sbjct: 4 DRKVALDAALKKIEKNFGKGSIMKLGEKADQKISTIPSGSLALDVALGVGGYPRGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHAIAEVQ+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVSLHAIAEVQRNGGTAAFIDAEHALDPQYAEKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGAID++ +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAIDIVVIDSVAALVPRAEIDGEMGASHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE T GG ALKF+A+VRLE+R ++K +G + VG R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQLK--QGTDIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+S+ G +LD A D++ + GAWY Y ++R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGQGISQEGELLDMAVEKDLISKSGAWYGYKEERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSM--MSDGSV 418
+ A QY+ D+P + E+ K+VR + DGS
Sbjct: 302 ENAKQYMADHPEMMAEVSKLVRDAYGIGDGST 333
>gi|408528884|emb|CCK27058.1| Protein RecA [Streptomyces davawensis JCM 4913]
Length = 372
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERSMEPIEVIPTGSTALDVALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|411006311|ref|ZP_11382640.1| recombinase A [Streptomyces globisporus C-1027]
Length = 374
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 244/322 (75%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+LGG+ +DAEHA DP Y+K LGVD+++LI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQRLGGSVAFIDAEHALDPEYAKKLGVDIDSLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEITDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +L+DNP L EIEK +
Sbjct: 302 KENARNFLKDNPDLANEIEKKI 323
>gi|346992739|ref|ZP_08860811.1| recombinase A [Ruegeria sp. TW15]
Length = 354
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 246/328 (75%), Gaps = 3/328 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
D + D+Q+ALD+A+ I FGKGS+ +LG +E +G L LD+ALG GGLP G
Sbjct: 9 DKKNADKQKALDSALAQIERQFGKGSIMKLGEDSKQDIEASSTGSLGLDIALGIGGLPMG 68
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RIVEI+GPESSGKTTL LH IAE QK GG VDAEHA DP Y++ LGVD++ L++ QP
Sbjct: 69 RIVEIYGPESSGKTTLTLHCIAEQQKRGGVCAFVDAEHALDPQYARKLGVDLDELLISQP 128
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEI D + RSGA++++ VDSV+ALTP++E+EG++G +G+QARLMSQA+RK++
Sbjct: 129 DTGEQALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRKLT 188
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
G+ +++ C +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK DE
Sbjct: 189 GSINRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKDR--DEV 246
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
VG + RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + G+W+SYGD+R
Sbjct: 247 VGNQTRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVKAGVVEKSGSWFSYGDER 306
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+GQGR+ A QYLRDN EIE +R+
Sbjct: 307 IGQGRENAKQYLRDNSRAALEIEDKIRA 334
>gi|347761691|ref|YP_004869252.1| DNA recombinase RecA [Gluconacetobacter xylinus NBRC 3288]
gi|347580661|dbj|BAK84882.1| DNA recombinase RecA [Gluconacetobacter xylinus NBRC 3288]
Length = 348
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGS+ R+G V+ +G L LD+ALG GGLP+GRIVE
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERPSEQVDVISTGSLGLDIALGIGGLPRGRIVE 66
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHAIAE Q+ GG +DAEHA DP Y++ LGVDV+NL++ QPD GE
Sbjct: 67 IYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGE 126
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G+ S
Sbjct: 127 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVS 186
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ LIFLNQIR KIGV +G+PE T+GG ALKF+ASVR++IR G IK DE G +
Sbjct: 187 RSNTMLIFLNQIRLKIGVMFGSPETTTGGNALKFYASVRMDIRRIGSIKD--KDEVTGNQ 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D IV + GAW+S QR+GQG
Sbjct: 245 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+LRD+P + +IE+ VR
Sbjct: 305 RENAKQFLRDHPEMAADIERRVR 327
>gi|414084129|ref|YP_006992837.1| protein RecA [Carnobacterium maltaromaticum LMA28]
gi|412997713|emb|CCO11522.1| protein RecA [Carnobacterium maltaromaticum LMA28]
Length = 359
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/321 (56%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+Q AL A++ I FGKG++ +LG +ET SG + LD+ALG GG PKGRI+E++
Sbjct: 19 KQAALSKALSKIEKDFGKGAIMKLGEKTSMKIETISSGSIALDVALGVGGYPKGRILEVY 78
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHAIAE QK GG A +DAEHA DP Y+ ALGV++++L++ QPD GE A
Sbjct: 79 GPESSGKTTMALHAIAEAQKAGGTAAFIDAEHALDPKYAAALGVNIDDLLLSQPDTGEQA 138
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + SGA+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG+ +
Sbjct: 139 LEIADALVSSGAVDILVVDSVAALVPRAEIEGEMGQSHVGLQARLMSQALRKLSGSINNT 198
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
IF+NQIR K+GV +GNPEVT GG ALKF+A++RLE+R +IK+ G + +G R +
Sbjct: 199 KTICIFINQIREKVGVMFGNPEVTPGGRALKFYATIRLEVRRAEQIKT--GTDILGNRTK 256
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
++V K+KV+ P+K AE +I++GEG+S+ G ++D A DI+ + GAWYSY +R+GQGR+
Sbjct: 257 LKVVKNKVAPPFKIAEVDIMYGEGISRAGELVDMASDSDIIDKAGAWYSYNGERIGQGRE 316
Query: 390 KALQYLRDNPLLQEEIEKVVR 410
A +YL DNP L EIEK VR
Sbjct: 317 NAKKYLLDNPELYAEIEKKVR 337
>gi|383639196|ref|ZP_09951602.1| recombinase A [Streptomyces chartreusis NRRL 12338]
Length = 374
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRTKEPIEVIPTGSTALDVALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|302558031|ref|ZP_07310373.1| RecA protein [Streptomyces griseoflavus Tu4000]
gi|302475649|gb|EFL38742.1| RecA protein [Streptomyces griseoflavus Tu4000]
Length = 375
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 8 DREKALDAALAQIERQFGKGAVMRMGERSMEPIEVIPTGSTALDVALGVGGLPRGRVVEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 68 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 128 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 188 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 245 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 305 KENARNFLKDNPDLANEIEKKIKEKLGVG 333
>gi|357044008|ref|ZP_09105693.1| recA [Prevotella histicola F0411]
gi|355367865|gb|EHG15292.1| recA [Prevotella histicola F0411]
Length = 339
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/323 (56%), Positives = 240/323 (74%), Gaps = 3/323 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL AAM+ I FGKGS+ R+G VE P+G + LD ALG GG P+GRI+EI+GP
Sbjct: 15 KALQAAMSKIEKDFGKGSIMRMGDEQIENVEVIPTGSVALDTALGVGGYPRGRIIEIYGP 74
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTLA+HAIAE QK GG A +DAEHAFD YS+ LGVDV+NL + QPDNGE ALE
Sbjct: 75 ESSGKTTLAIHAIAEAQKQGGIAAFIDAEHAFDRFYSEKLGVDVDNLWISQPDNGEQALE 134
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD++ RS AID++ +DSV+ALTP+ EIEG++G +GLQARLMSQALRK++ SK
Sbjct: 135 IADQLIRSSAIDILVIDSVAALTPKKEIEGDMGDSAVGLQARLMSQALRKLTSTISKTNT 194
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR IK GD+ +G +VRV+
Sbjct: 195 CCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRVTAIKD--GDQVIGNQVRVK 252
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
+ K+KV+ P+++AEFEI FGEG+SK+G ++D +I+ + G+W+SY +L QGRD
Sbjct: 253 IVKNKVAPPFRKAEFEITFGEGISKIGELVDLGVQYNIIQKSGSWFSYNGTKLAQGRDAT 312
Query: 392 LQYLRDNPLLQEEIEKVVRSMMS 414
L+DNP L EEIE +++ ++
Sbjct: 313 KTMLKDNPELAEEIEGLIKQAIA 335
>gi|365961059|ref|YP_004942626.1| recombinase A [Flavobacterium columnare ATCC 49512]
gi|365737740|gb|AEW86833.1| recombinase A [Flavobacterium columnare ATCC 49512]
Length = 334
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/326 (53%), Positives = 247/326 (75%), Gaps = 3/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G VE SG L +DLALG GG PKGRI+EIF
Sbjct: 8 KLKALQLTLDKLDKAYGKGTVMKMGDKAIEEVEVISSGSLGVDLALGVGGYPKGRIIEIF 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LG+D++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAEKLGIDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIA+ + RSGA+D++ +DSV+ALTP++EIEG++G ++GL ARLMSQALRK++ SK
Sbjct: 128 LEIAESLIRSGAVDIVVIDSVAALTPKSEIEGDMGDSKMGLHARLMSQALRKLTATISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+ F+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK G+ +G R +
Sbjct: 188 NCTVFFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRRSSQIKD--GENVLGNRTK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P+K AEF+I++GEGVSK G +LD A +++ + G+W+SYG+ +LGQGRD
Sbjct: 246 VKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFEVIKKSGSWFSYGETKLGQGRD 305
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSD 415
++DNP L EE+E ++ ++ +
Sbjct: 306 SVKSLIKDNPELAEELEIKIKELIKN 331
>gi|207366352|emb|CAQ58071.1| recombinase A [Agrobacterium tumefaciens]
Length = 322
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/320 (59%), Positives = 243/320 (75%), Gaps = 4/320 (1%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFG 150
+AL+AA++ I SFGKGS+ +LGS + VET +G L+LD+ALG GGLPKGRI+EI+G
Sbjct: 1 KALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEIYG 60
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLAL IAE QK GG VDAEHA DP Y++ LGVD++ L++ QPD GE AL
Sbjct: 61 PESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQAL 120
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D + RSGA+D++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ + SK+
Sbjct: 121 EITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSK 180
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K + +E VG + RV
Sbjct: 181 CMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVK--EREEVVGNQTRV 238
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+K++ P+KQ EF+I++GEGVSK G ++D IV + GAW+SY QRLGQGR+
Sbjct: 239 KVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGREN 298
Query: 391 ALQYLRDNPLLQEEIEKVVR 410
A +LRDNP EIE +R
Sbjct: 299 AKIFLRDNPETANEIELALR 318
>gi|400976499|ref|ZP_10803730.1| recombinase A [Salinibacterium sp. PAMC 21357]
Length = 386
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 249/326 (76%), Gaps = 6/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+++L+ A+ I+ FGKGSV RLGS A VE P+G + LD+ALG GGLP+GRIVEI
Sbjct: 6 DREKSLETALAQIDRQFGKGSVMRLGSDERAPVEVIPTGSIALDVALGIGGLPRGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHAIA Q+ GG A +DAEHA DP Y+ LGVD++ L+V QPD GE
Sbjct: 66 YGPESSGKTTLTLHAIANAQRNGGIAAFIDAEHALDPEYAAKLGVDIDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG+IDLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S+
Sbjct: 126 ALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLTGGLSQ 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
T+IF+NQ+R KIGV++G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 186 TNTTMIFINQLREKIGVFFGSPETTAGGKALKFYASVRLDIR---RIETLKDGTDAVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D +IV + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKMAPPFKQAEFDILYGIGISREGSLIDFGVDHEIVRKSGAWYTYDGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIE-KVVRSM 412
++K+ +L NP + EIE K++R +
Sbjct: 303 KEKSRAFLLQNPAIALEIEQKIMRKL 328
>gi|383807189|ref|ZP_09962750.1| recombinase A [Candidatus Aquiluna sp. IMCC13023]
gi|383299619|gb|EIC92233.1| recombinase A [Candidatus Aquiluna sp. IMCC13023]
Length = 362
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/330 (54%), Positives = 250/330 (75%), Gaps = 6/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I+ FGKGSV RLGS A + + +G + LD+ALG GGLP+GRIVE+
Sbjct: 6 DREKALDTALAQIDRQFGKGSVMRLGSEERAPIASISTGSIALDVALGIGGLPRGRIVEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPE+SGKTT+ALHAIA QK GG A +DAEHA DP Y+ LGVD++ L+V QPD GE
Sbjct: 66 YGPEASGKTTIALHAIASAQKAGGTAAFIDAEHALDPIYAAKLGVDIDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSG+ID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 126 ALEITDMLIRSGSIDVIVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLTGAISN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED--VGV 326
T IF+NQ+R KIGV++G+PE TSGG ALKF+ASVRL+IR +I+++K ++ VG
Sbjct: 186 TDTTAIFINQLREKIGVFFGSPETTSGGKALKFYASVRLDIR---RIETLKDGQNNAVGN 242
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+K++ P+KQAEF+IIFGEG+S+ G ++D DIV + GAWY++ ++LGQ
Sbjct: 243 RSRVKVVKNKLASPFKQAEFDIIFGEGISREGSLIDFGVEQDIVNKSGAWYTFDGEQLGQ 302
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
G++ + ++L++NP + IE+ +++ + G
Sbjct: 303 GKENSRKFLKENPEIAATIEQKIKAKLGVG 332
>gi|395777268|ref|ZP_10457783.1| recombinase A [Streptomyces acidiscabies 84-104]
Length = 378
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GG+P+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERPNEPIEVIPTGSTALDVALGVGGIPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+ GG +DAEHA DP Y++ LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQRAGGQVAFIDAEHALDPEYARKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGHGISREGGLIDMGVENGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLADEIEKKIKEKLGVG 330
>gi|172057063|ref|YP_001813523.1| recA protein [Exiguobacterium sibiricum 255-15]
gi|229892799|sp|B1YMB9.1|RECA_EXIS2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|171989584|gb|ACB60506.1| recA protein [Exiguobacterium sibiricum 255-15]
Length = 347
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/322 (54%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + V SG +TLD+ALG GG P+GR++E+
Sbjct: 3 DRKAALEMALRQIEKQFGKGSIMKLGESADQRVSVISSGSITLDIALGAGGYPRGRVIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT++LHAIAEVQK GG A +DAEHA DP+Y+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVSLHAIAEVQKQGGQAAFIDAEHALDPAYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGATNK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIGV +GNPE T GG ALKF++SVRLE+R +K+ G + VG R
Sbjct: 183 SKTIVIFINQIREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAEALKN--GTDIVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+K++ P+KQAE +I++G+G+SK G ++D +DIV + GAWYSY +RLGQGR
Sbjct: 241 KLKVVKNKIAPPFKQAEVDIMYGQGISKFGELIDLGTDLDIVQKSGAWYSYNSERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QY+ ++P + +E+E+++R
Sbjct: 301 ENAKQYMIEHPDVADEVERLIR 322
>gi|297202809|ref|ZP_06920206.1| recombinase A [Streptomyces sviceus ATCC 29083]
gi|297148206|gb|EFH28888.1| recombinase A [Streptomyces sviceus ATCC 29083]
Length = 377
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GG+P+GR+VE+
Sbjct: 8 DREKALDAALAQIERQFGKGAVMRMGERPNEPIEVIPTGSTALDVALGVGGIPRGRVVEV 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG +DAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 68 YGPESSGKTTLTLHAVANAQKAGGQVAFIDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 128 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G + VG R
Sbjct: 188 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRMDIR---RIETLKDGTDAVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 245 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 305 KENARNFLKDNPDLANEIEKKIKEKLGVG 333
>gi|330993236|ref|ZP_08317172.1| Protein recA [Gluconacetobacter sp. SXCC-1]
gi|329759638|gb|EGG76146.1| Protein recA [Gluconacetobacter sp. SXCC-1]
Length = 348
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGS+ R+G V+ +G L LD+ALG GGLP+GRIVE
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERPSEQVDVISTGSLGLDIALGIGGLPRGRIVE 66
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHAIAE Q+ GG +DAEHA DP Y++ LGVDV+NL++ QPD GE
Sbjct: 67 IYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGE 126
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G+ S
Sbjct: 127 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVS 186
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ LIFLNQIR KIGV +G+PE T+GG ALKF+ASVR++IR G IK DE G +
Sbjct: 187 RSNTMLIFLNQIRLKIGVMFGSPETTTGGNALKFYASVRMDIRRIGSIKD--KDEVTGNQ 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D IV + GAW+S QR+GQG
Sbjct: 245 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+LRD+P + +IE+ VR
Sbjct: 305 RENAKQFLRDHPEMAADIERRVR 327
>gi|357410802|ref|YP_004922538.1| recA protein [Streptomyces flavogriseus ATCC 33331]
gi|320008171|gb|ADW03021.1| recA protein [Streptomyces flavogriseus ATCC 33331]
Length = 376
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 244/322 (75%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+LGG+ +DAEHA DP Y+K LGVD+++LI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQRLGGSVAFIDAEHALDPEYAKKLGVDIDSLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +L+DNP L EIEK +
Sbjct: 302 KENARNFLKDNPDLANEIEKKI 323
>gi|237668259|ref|ZP_04528243.1| protein RecA [Clostridium butyricum E4 str. BoNT E BL5262]
gi|237656607|gb|EEP54163.1| protein RecA [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 359
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A+++AM++I FGKGSV +LG ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 EKLKAIESAMSNIEKQFGKGSVMKLGDHNVTTMDAISTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+AL AE QK GG +DAEHA DPSY++ +GVDVE+LI+ QPD GE
Sbjct: 67 YGPESSGKTTVALSIAAEAQKKGGAVGYIDAEHALDPSYAQKIGVDVESLIISQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGAID++ VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G +K
Sbjct: 127 GLEIAEALVRSGAIDVLVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL+IR IK +GD +G R
Sbjct: 187 TNCVAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDIRRIDSIK--QGDSIIGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P++QAEF+I++ EG+S+ G +LD +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKVMKNKVAPPFRQAEFDIMYNEGISRTGNVLDVGVKEEIVQKSGAWFSYGDVRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ + YL+DNP + +IE +R+
Sbjct: 305 ENSKVYLKDNPDVALDIENQIRA 327
>gi|325983480|ref|YP_004295882.1| recA protein [Nitrosomonas sp. AL212]
gi|325532999|gb|ADZ27720.1| recA protein [Nitrosomonas sp. AL212]
Length = 344
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 249/326 (76%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
+R +ALD A+ I FGKGS+ RLG+ A ++ +G L LD+ALG GGLP+GRIVE
Sbjct: 4 NRSKALDVALAQIEKQFGKGSIMRLGANDVAYDIQVVSTGSLGLDIALGVGGLPRGRIVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L IAE+QK+GG A +DAEHA DP Y++ +GV+V+ L++ QPDNGE
Sbjct: 64 IYGPESSGKTTLTLQVIAEMQKVGGTAAFIDAEHALDPQYAQKIGVNVKELLISQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSG++D+I +DSV+ALTPRAEIEG++G Q+GLQARLMSQALRK++ N
Sbjct: 124 QALEIADMLVRSGSVDIIVIDSVAALTPRAEIEGDMGDPQMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG IK KGDE +G
Sbjct: 184 RSNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIK--KGDETIGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQA+F+I++GEG+S+ +++ + ++ + GAWY+Y +++GQG
Sbjct: 242 TRVKVVKNKVAPPFKQADFDILYGEGISRESEIIELGVLHKLIDKAGAWYAYKGEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+D YL+++ + EIE+ +RS++
Sbjct: 302 KDNVRDYLKEHKDIALEIEQKIRSIV 327
>gi|377809456|ref|YP_005004677.1| protein RecA [Pediococcus claussenii ATCC BAA-344]
gi|361056197|gb|AEV95001.1| protein RecA [Pediococcus claussenii ATCC BAA-344]
Length = 350
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R+ ALD A+ I +FGKGS+ R+G A + T PSG L LD ALG GG PKGRIVEI
Sbjct: 4 ERKTALDNALKKIEKNFGKGSIMRMGDAVDTKISTIPSGSLALDEALGVGGFPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AEVQK GG A +DAE+A DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAVAEVQKRGGTAAYIDAENAMDPVYAQNLGVNIDELLLSQPDTGEE 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGAIDL+ +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAIDLVVIDSVAALVPRAEIDGEMGDAHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPEVT GG ALKF+A++RLE+R ++K G + +G RV
Sbjct: 184 TKTIALFINQIREKVGVMFGNPEVTPGGRALKFYATIRLEVRRAEQLKD--GSDVIGNRV 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+++AE +I++G G+S+ G ++D A +IV + G+WYSYGD R+GQGR
Sbjct: 242 RIKVVKNKVAPPFRKAEVDIMYGHGISQTGELIDMAAEKEIVKKSGSWYSYGDDRIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL D+P ++EE+ VR
Sbjct: 302 ENAKQYLVDHPDVKEELFAKVR 323
>gi|325290320|ref|YP_004266501.1| recombinase A [Syntrophobotulus glycolicus DSM 8271]
gi|324965721|gb|ADY56500.1| RecA protein [Syntrophobotulus glycolicus DSM 8271]
Length = 348
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALD A+ I FGKG+V RLG A + +E +G L LD+ALG GG+P+GR+VE
Sbjct: 5 DKLKALDIALGQIEKQFGKGAVMRLGEASTKMAIEVISTGALALDVALGAGGVPRGRVVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+KALGV+ + L++ QPD GE
Sbjct: 65 IYGPESSGKTTVALHVIAEAQKAGGVAAFIDAEHALDPEYAKALGVNTDELLISQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + + RSGAID++ +DSV+AL PRAEIEGE+G +GL ARLMSQALRK++G S
Sbjct: 125 QALEICEALVRSGAIDVVVIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ ++F+NQIR K+G+ +GNPE T+GG ALKF+ASVRLE++ IK +G + +G R
Sbjct: 185 KSRTCVVFINQIREKVGIMFGNPETTTGGRALKFYASVRLEVKKQDVIK--QGQDVIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+ A+F+II+GEG+S+ G ++D IV + GAWYSY +RLGQG
Sbjct: 243 TRVKVVKNKIAPPFNHADFDIIYGEGISREGSLVDLGAETTIVTKSGAWYSYQGERLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
R+ A +YLRD+P +++EIE +R +
Sbjct: 303 RESAKEYLRDHPEVRQEIEAKIREKL 328
>gi|307690446|ref|ZP_07632892.1| recombinase A [Clostridium cellulovorans 743B]
Length = 350
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +A+ AAM I FGKG++ LG V++ P+GCL LD+ALG GG+P+GRIVEI
Sbjct: 4 DKLKAIQAAMTQIEKQFGKGAIMTLGENSILDVDSIPTGCLALDVALGIGGVPRGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QK GG A +D EHA DP+Y++ +GV+ E+LIV QPD GE
Sbjct: 64 YGPESSGKTTVALHVVAEAQKQGGAAAFIDVEHALDPAYARRVGVNTEDLIVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 124 ALEITEALVRSGAVDVVIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLAGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+G+ +GNPE T GG ALKF+ASVRL+IR T IK +G++ +G R
Sbjct: 184 SKCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDIRKTDSIK--QGEDVLGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AEF+I++ EG+SK G +LD +IV + GAW+SYGD RLGQGR
Sbjct: 242 KIKVIKNKVAPPFKLAEFDIMYNEGISKSGNILDVGVKEEIVQKSGAWFSYGDIRLGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+ +NP L E+E +R
Sbjct: 302 ENAKQFFVENPELALEVENKIR 323
>gi|410666362|ref|YP_006918733.1| recombinase A [Simiduia agarivorans SA1 = DSM 21679]
gi|409028719|gb|AFV01004.1| recombinase A [Simiduia agarivorans SA1 = DSM 21679]
Length = 347
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/334 (54%), Positives = 247/334 (73%), Gaps = 3/334 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL AA++ I FGKG+V R+G + + +G L LD+ALG GGLPKGRIVEI
Sbjct: 4 NKEKALQAALSQIERQFGKGTVMRMGDREQVAIPSISTGSLGLDVALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IAE QK GG VDAEHA DP Y++ LGV+V+ LIV QPD GE
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKAGGVCAFVDAEHALDPIYAEKLGVNVDELIVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALE+AD + RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GN
Sbjct: 124 ALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGEMGDHHVGLQARLMSQALRKITGNIKN 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
A C IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR TG +K GDE +G
Sbjct: 184 ANCLAIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGAVKD--GDEVIGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++G+G++ G ++D + ++ + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKVAPPFKQAEFQILYGQGINLQGEIIDFGVKLGLIDKAGAWYSYKGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGS 422
+ +++L +NP +Q+EIE VR+ + G V S
Sbjct: 302 NNVVKFLLENPDIQKEIETQVRAELLGGKVKATS 335
>gi|381183450|ref|ZP_09892184.1| recombinase A [Listeriaceae bacterium TTU M1-001]
gi|380316653|gb|EIA20038.1| recombinase A [Listeriaceae bacterium TTU M1-001]
Length = 349
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/353 (52%), Positives = 259/353 (73%), Gaps = 10/353 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ ALD A+ I FGKGS+ +LG + T SG L LD+ALG GG P+GRI+E
Sbjct: 3 DRQAALDQALKSIEKQFGKGSIMKLGEHSDQNISTVSSGSLALDIALGVGGYPRGRIIET 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP+Y+K LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQKQGGTAAFIDAEHALDPTYAKNLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDILVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGVINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF+++VRLE+R ++K +G + +G +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTVRLEVRRAEQLK--QGTDVIGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++GEG+S+ G ++D A +D++ + G+WYSY ++R+GQGR
Sbjct: 241 KIKVVKNKVAPPFRVAEVDIMYGEGISREGELVDMASEVDVINKSGSWYSYNEERIGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE--NILEE 439
+ A Q+L+++P +++EI K VR M D V S P+ +E N+LEE
Sbjct: 301 ENAKQFLKEHPEIRDEISKRVR-MEYDIDVTG----EQASAPDADEEFNLLEE 348
>gi|83309721|ref|YP_419985.1| recombinase A [Magnetospirillum magneticum AMB-1]
gi|123754202|sp|Q2W9P9.1|RECA_MAGSA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|82944562|dbj|BAE49426.1| RecA protein [Magnetospirillum magneticum AMB-1]
Length = 359
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 246/328 (75%), Gaps = 4/328 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
D +DRQ+AL+AA++ I +FGKGS+ +LG + E +G L LD+ALG GG+P+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRI+E++GPESSGKTTLALH IAE QK GG VDAEHA DPSY++ LGV+++ L++ Q
Sbjct: 70 GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEIAD + RSGA+D++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G+ SK+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVR+EIR G IK DE
Sbjct: 190 TGSVSKSKTIVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMEIRRVGAIKDR--DE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+K++ P+K +F+I++GEG+SK+G ++D ++V + GAW+SY
Sbjct: 248 VVGNQTRVKVVKNKLAPPFKVVDFDIMYGEGISKMGELIDLGVKANVVEKSGAWFSYNST 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A +LR+NP + EIE +R
Sbjct: 308 RIGQGRENAKTFLRENPAMAAEIEGAIR 335
>gi|304570555|ref|YP_266064.2| recA protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 383
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 245/332 (73%), Gaps = 3/332 (0%)
Query: 80 SSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-G 138
S+ + S ++ +ALDAAM+ I +FGKGSV +LG VE+ +G L+LD+ALG G
Sbjct: 11 STKAQQSEGNEKNKALDAAMSQIIDNFGKGSVMKLGQRRAMDVESISTGSLSLDVALGIG 70
Query: 139 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENL 198
GLPKGR++E++GPESSGKTTLAL +AE QK GG +DAEHA DP Y+K LGVD E L
Sbjct: 71 GLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEEL 130
Query: 199 IVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 258
++ QPD GE ALEIAD + +SG+I +I +DSV+ALTPRAEIEGE+G +GLQ+RLMSQA
Sbjct: 131 LISQPDTGEQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQA 190
Query: 259 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318
LRK++G+ S +IF+NQIR KIGV +G+PE TSGG ALKF++SVR++IR G IK+
Sbjct: 191 LRKLTGSISSTNTMMIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRMDIRRIGAIKN- 249
Query: 319 KGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYS 378
GDE +G RV+V K+KV+ P+K EF++++G+G+SK+G ++D DIV + GAWY+
Sbjct: 250 -GDEIIGNSTRVKVVKNKVAPPFKVVEFDLMYGKGISKVGELVDLGSKADIVEKAGAWYA 308
Query: 379 YGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
Y +++GQGR+ A YL NP + EIE +R
Sbjct: 309 YKGEKIGQGRENAKTYLEQNPKIAAEIEMAIR 340
>gi|170781613|ref|YP_001709945.1| recombinase A [Clavibacter michiganensis subsp. sepedonicus]
gi|169156181|emb|CAQ01323.1| recombinase A [Clavibacter michiganensis subsp. sepedonicus]
Length = 405
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 248/323 (76%), Gaps = 5/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+++L+ A+ I+ FGKGSV RLGS A V P+G + LD+ALG GGLP+GRIVEI
Sbjct: 49 DREKSLETALAQIDRQFGKGSVMRLGSDERAPVAVIPTGSVALDVALGIGGLPRGRIVEI 108
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHAIA Q+ GG A +DAEHA DP Y+K LGVD++ L+V QPD GE
Sbjct: 109 YGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPEYAKKLGVDIDALLVSQPDTGEQ 168
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG+IDL+ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G ++
Sbjct: 169 ALEIADMLVRSGSIDLVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGGLNQ 228
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
T+IF+NQ+R KIGV++G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 229 TQTTMIFINQLREKIGVFFGSPETTAGGKALKFYASVRLDIR---RIETLKDGTDAVGNR 285
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D +IV + GAWY+Y +LGQG
Sbjct: 286 TRVKVVKNKMAPPFKQAEFDILYGTGISREGSLIDFGVEHEIVRKSGAWYTYDGDQLGQG 345
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
++ + ++L +NP + EIE+ ++
Sbjct: 346 KENSRKHLLNNPEIAAEIEQKIK 368
>gi|154503919|ref|ZP_02040979.1| hypothetical protein RUMGNA_01745 [Ruminococcus gnavus ATCC 29149]
gi|336431950|ref|ZP_08611791.1| recA [Lachnospiraceae bacterium 2_1_58FAA]
gi|153795518|gb|EDN77938.1| putative RecA protein [Ruminococcus gnavus ATCC 29149]
gi|336019701|gb|EGN49424.1| recA [Lachnospiraceae bacterium 2_1_58FAA]
Length = 358
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/322 (54%), Positives = 248/322 (77%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++ALDAA+ + FGKG+V +LG VET P+GCL+LDLALG GG+PKGR++E+
Sbjct: 5 EKKKALDAAIAKLEKDFGKGTVMKLGEGSHVAVETVPTGCLSLDLALGLGGVPKGRVIEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ LH IAEVQK GG A +DAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 65 YGPESSGKTTVTLHMIAEVQKRGGIAGFIDAEHALDPVYAKKIGVDIDELYISQPDSGDQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ M RSGA+D+I +DSV+AL P+ EIEG++G +GLQARLMSQALRK++ SK
Sbjct: 125 ALEIAETMVRSGAVDIIVIDSVAALVPKQEIEGDMGDSHVGLQARLMSQALRKLTPVISK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R +K + E VG R
Sbjct: 185 SNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASVRMDVRRIETLK--QSGEMVGNRT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R+++ K+K++ P+K+AEF+I+FG+G+SK G +LD A +D+V + GAWY+Y +++GQGR
Sbjct: 243 RIKIVKNKIAPPFKEAEFDIMFGKGISKEGDVLDLAVGIDLVKKSGAWYAYEGEKIGQGR 302
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A YL +P + EE+++ VR
Sbjct: 303 ENAKAYLTSHPEVMEELDRKVR 324
>gi|455652064|gb|EMF30745.1| recombinase A [Streptomyces gancidicus BKS 13-15]
Length = 370
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERSKEPIEVIPTGSTALDVALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIE+ ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIERKIKEKLGVG 330
>gi|354807397|ref|ZP_09040866.1| protein RecA [Lactobacillus curvatus CRL 705]
gi|354514119|gb|EHE86097.1| protein RecA [Lactobacillus curvatus CRL 705]
Length = 352
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 242/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ ALDAA+ I +FGKGS+ R+G V T SG L LD ALG GG P+GRIVEI
Sbjct: 5 ERQAALDAALKKIEKNFGKGSIMRMGEKVDTQVSTVSSGSLALDEALGVGGYPRGRIVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AEVQK GG A +DAE+A DP Y+ ALGV++++L++ QPD GE
Sbjct: 65 YGPESSGKTTVALHAVAEVQKQGGTAAYIDAENAMDPKYATALGVNIDDLLLSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 125 GLEIADALVSSGAVDILVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGTINK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPEVT GG ALKF+++VRLE+R IK+ G + +G R
Sbjct: 185 TKTIALFINQIREKVGVMFGNPEVTPGGRALKFYSTVRLEVRRAETIKN--GTDMIGNRA 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+K AE +I++G+G+S+ G ++D A DI+ + G+WYSYGD+R+GQGR
Sbjct: 243 RIKVVKNKVAPPFKVAEVDIMYGQGISQTGELVDMAVEKDIINKSGSWYSYGDERIGQGR 302
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A YL D+P +Q+E+ VR
Sbjct: 303 ENAKNYLADHPEVQDEVRLKVR 324
>gi|302874936|ref|YP_003843569.1| recA protein [Clostridium cellulovorans 743B]
gi|302577793|gb|ADL51805.1| recA protein [Clostridium cellulovorans 743B]
Length = 357
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +A+ AAM I FGKG++ LG V++ P+GCL LD+ALG GG+P+GRIVEI
Sbjct: 11 DKLKAIQAAMTQIEKQFGKGAIMTLGENSILDVDSIPTGCLALDVALGIGGVPRGRIVEI 70
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QK GG A +D EHA DP+Y++ +GV+ E+LIV QPD GE
Sbjct: 71 YGPESSGKTTVALHVVAEAQKQGGAAAFIDVEHALDPAYARRVGVNTEDLIVSQPDTGEQ 130
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G+ +K
Sbjct: 131 ALEITEALVRSGAVDVVIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLAGSINK 190
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+G+ +GNPE T GG ALKF+ASVRL+IR T IK +G++ +G R
Sbjct: 191 SKCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDIRKTDSIK--QGEDVLGNRT 248
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AEF+I++ EG+SK G +LD +IV + GAW+SYGD RLGQGR
Sbjct: 249 KIKVIKNKVAPPFKLAEFDIMYNEGISKSGNILDVGVKEEIVQKSGAWFSYGDIRLGQGR 308
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+ +NP L E+E +R
Sbjct: 309 ENAKQFFVENPELALEVENKIR 330
>gi|403378732|ref|ZP_10920789.1| recombinase A [Paenibacillus sp. JC66]
Length = 334
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/306 (57%), Positives = 239/306 (78%), Gaps = 3/306 (0%)
Query: 106 FGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAI 164
FGKGSV +LG + VET SG L LD+ALG GG P+GRI+E++GPESSGKTT+ALHAI
Sbjct: 2 FGKGSVMKLGESTHMQVETVSSGSLALDIALGIGGFPRGRIIEVYGPESSGKTTVALHAI 61
Query: 165 AEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDL 224
AEVQK+GG A +DAEHA DP Y+K LG+D++ L++ QPD GE ALEIA+ + RSGA+D+
Sbjct: 62 AEVQKIGGQAAFIDAEHALDPQYAKKLGIDIDELLLSQPDTGEQALEIAEALVRSGAVDI 121
Query: 225 ICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIG 284
I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K+ IF+NQ+R K+G
Sbjct: 122 IVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINKSKVIAIFINQLREKVG 181
Query: 285 VYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQA 344
V +GNPEVT GG ALKF++++RL++R +K +G++ +G R R++V K+KV+ P+KQA
Sbjct: 182 VMFGNPEVTPGGRALKFYSTIRLDVRRVETLK--QGNDMIGNRTRIKVVKNKVAPPFKQA 239
Query: 345 EFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEE 404
+ +I++GEG+S+ G ++D MDIV + GAWYS+ ++RLGQGR+ A QYLR+N + E
Sbjct: 240 DIDIMYGEGISREGSIIDIGTEMDIVDKSGAWYSFENERLGQGRENAKQYLRENSKIAEA 299
Query: 405 IEKVVR 410
IEK +R
Sbjct: 300 IEKKIR 305
>gi|350551783|ref|ZP_08920995.1| Protein recA [Thiorhodospira sibirica ATCC 700588]
gi|349796474|gb|EGZ50261.1| Protein recA [Thiorhodospira sibirica ATCC 700588]
Length = 352
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 244/325 (75%), Gaps = 8/325 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALV---ETFPSGCLTLDLALG-GGLPKGRI 145
DR++ L AA+ I FGKG+V R+G GGA V E +G L LD+ALG GGLPKGR+
Sbjct: 4 DRKKQLSAALTQIERQFGKGAVIRMG--GGAAVRDIEAISTGSLALDIALGIGGLPKGRV 61
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
VEIFGPESSGKTTL L IA+ Q+ GG A +DAEHA DP Y++ +GVD++ L+V QPD
Sbjct: 62 VEIFGPESSGKTTLTLQVIAQAQRAGGTAAFIDAEHALDPGYARRIGVDIDELLVSQPDT 121
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIAD + RSG +D++ +DSV+ALTP+AEIEGE+G +GLQARLMSQALRK++ N
Sbjct: 122 GEQALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLTAN 181
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 182 IQRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--KGDEVIG 239
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
RV+V K+K++ P+K+A FEI++GEG+S+LG ++D ++ + G+WYSY +R+G
Sbjct: 240 NDTRVKVIKNKMAPPFKEATFEILYGEGISRLGELIDIGVKDGLIDKSGSWYSYQGERIG 299
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVR 410
QG+D A Q+L++ P L +EIE+ +R
Sbjct: 300 QGKDNARQFLKEKPELAQEIEQQIR 324
>gi|210615819|ref|ZP_03290800.1| hypothetical protein CLONEX_03018 [Clostridium nexile DSM 1787]
gi|210150155|gb|EEA81164.1| hypothetical protein CLONEX_03018 [Clostridium nexile DSM 1787]
Length = 347
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 259/335 (77%), Gaps = 7/335 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+Q+ALDAA+ + FGKG+V +LG AG + VET P+G L+LD+ALG GG+PKGR++E
Sbjct: 12 DKQKALDAAILKLEKDFGKGTVMKLGDAGANVSVETVPTGSLSLDIALGLGGVPKGRVIE 71
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ LH IAEVQK GG A +DAEHA DP Y+K +GV+++ L + QPD+G+
Sbjct: 72 VYGPESSGKTTVTLHMIAEVQKRGGIAGFIDAEHALDPVYAKNIGVNIDELYISQPDSGD 131
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ M RSGA+D+I +DSV+AL P+ EIEG++G +GLQARLMSQALRK++ S
Sbjct: 132 QALEIAETMVRSGAMDIIVIDSVAALVPKQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 191
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD-EDVGV 326
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R +I+++K + E VG
Sbjct: 192 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASVRMDVR---RIETLKQNGEMVGN 248
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R R+++ K+K++ P+K+AEF+I+FG+G+SK G +LD A +D+V + GAWY+Y ++GQ
Sbjct: 249 RTRIKIVKNKIAPPFKEAEFDIMFGKGISKEGDILDLATKLDLVNKSGAWYAYNGDKIGQ 308
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMS-DGSVHQ 420
GR+ A YL +P + EE+E+ +R+ DGSV +
Sbjct: 309 GRENAKIYLGQHPEIMEELEEKIRAHYHLDGSVEK 343
>gi|119383349|ref|YP_914405.1| recombinase A [Paracoccus denitrificans PD1222]
gi|119373116|gb|ABL68709.1| recA protein [Paracoccus denitrificans PD1222]
Length = 356
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 246/332 (74%), Gaps = 4/332 (1%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GG 139
D D R D+Q+ALD+A+ I FGKGS+ +LG+ A +E +G L LD+ALG GG
Sbjct: 8 DMNDKRSADKQKALDSALAQIERQFGKGSIMKLGADNPVAEIEATSTGSLGLDIALGIGG 67
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
LPKGRI+EIFGPESSGKTTL LH +AE QK GG VDAEHA DP Y+K LGV+++ L+
Sbjct: 68 LPKGRIIEIFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELL 127
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
+ QPD GE ALEI D + RSGA+ L+ VDSV+ALTP++EIEG++G Q+G QARLMSQA+
Sbjct: 128 ISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAM 187
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK++ + ++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK
Sbjct: 188 RKLTASIGRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRAGSIKDR- 246
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
DE G RV+V K+KV+ P++Q EF+I++GEG+SK+G ++D +V + G+WYSY
Sbjct: 247 -DEVTGNATRVKVVKNKVAPPFRQVEFDIMYGEGISKVGELIDLGIKAGVVEKSGSWYSY 305
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
GD+R+GQGR+ A Q+LRD+P + IE +R+
Sbjct: 306 GDERIGQGRENAKQFLRDHPDMAHAIEDKIRA 337
>gi|336117764|ref|YP_004572532.1| protein RecA [Microlunatus phosphovorus NM-1]
gi|334685544|dbj|BAK35129.1| protein RecA [Microlunatus phosphovorus NM-1]
Length = 350
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/329 (56%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+ A+ I+ +GKGSV RLG +E P+G + LD+ALG GGLP+GR+VEI
Sbjct: 7 DREKALETALAQIDKQYGKGSVMRLGEEVRTPIEVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIA Q GG +DAEHA DP Y+ LGVD ++L+V QPDNGE
Sbjct: 67 YGPESSGKTTVALHAIANAQAAGGICAFIDAEHALDPDYAAKLGVDTDSLLVSQPDNGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+ LI +DSV+ALTPRAEIEGE+G +GLQARLMSQALRKM+G S
Sbjct: 127 ALEIADMLVRSGALALIVIDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKMTGALSG 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
AG T IF+NQ+R KIGV +G+PE T+GG ALKF++SVRL++R +I+++K G E VG R
Sbjct: 187 AGTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVR---RIETLKDGQEMVGNR 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G G+S+ G +LD I+ + GAW++Y +LGQG
Sbjct: 244 TRVKVVKNKVAPPFKQAEFDILYGRGISREGSLLDLGVEAGIIRKAGAWFTYDTDQLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
R+ A YL NP L E+EK ++ M+ G
Sbjct: 304 RENARNYLLANPDLANELEKKIKERMNIG 332
>gi|403251213|ref|ZP_10917565.1| RecA/RadA recombinase [actinobacterium SCGC AAA027-L06]
gi|402915468|gb|EJX36439.1| RecA/RadA recombinase [actinobacterium SCGC AAA027-L06]
Length = 371
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
D R DR ++LD A+ I FGKGSV ++G +E P+G + LD+ALG GGLP+G
Sbjct: 22 DKRSSDRAKSLDTALAQIERQFGKGSVMKMGDRKAVAMEVIPTGSVALDIALGVGGLPRG 81
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
R+VEI+GPESSGKTT+ALHAIA QK GG A +DAEHA DP Y+K LGVD++ L+V QP
Sbjct: 82 RVVEIYGPESSGKTTVALHAIANAQKAGGIAAFIDAEHALDPEYAKKLGVDIDALLVSQP 141
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEI D + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRKM+
Sbjct: 142 DTGEQALEIMDMLVRSGAIDIVVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKMT 201
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDE 322
G ++ T IF+NQ+R KIGV++G+PE T+GG ALKF+AS+R+++R +I+++K G E
Sbjct: 202 GALHQSNTTAIFINQLRDKIGVFFGSPETTTGGKALKFYASIRMDVR---RIETLKDGQE 258
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG R RV++ K+KV+ P+KQAEF+II+G G+S+ G ++D IV + GAW++Y
Sbjct: 259 AVGNRTRVKIVKNKVAPPFKQAEFDIIYGVGISREGSLIDLGVEAGIVKKSGAWFTYEGD 318
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+LGQG++ A +L DNP L +IE +R+
Sbjct: 319 QLGQGKENARAFLIDNPDLANDIETKIRA 347
>gi|317125294|ref|YP_004099406.1| recA protein [Intrasporangium calvum DSM 43043]
gi|315589382|gb|ADU48679.1| recA protein [Intrasporangium calvum DSM 43043]
Length = 347
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/329 (56%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL + M I +FGKG+V RLG A +E P+G + LD+ALG GGLP+GR+VEI
Sbjct: 6 DKDKALSSVMGQIEKNFGKGAVMRLGDDVRAPIEVIPTGSIALDVALGIGGLPRGRVVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y++ LGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPDYAQRLGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 126 ALEIADMLIRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGALNS 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 186 TGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGTEPVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDILYGLGISREGGIIDMGVEHGFVRKAGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +LRDNP L +EIEK V+ + G
Sbjct: 303 KENARNFLRDNPDLADEIEKKVKEKLGVG 331
>gi|386842939|ref|YP_006247997.1| recombinase A [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374103240|gb|AEY92124.1| recombinase A [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451796231|gb|AGF66280.1| recombinase A [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 378
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 8 DREKALDAALAQIERQFGKGAVMRMGERSKEPIEVIPTGSTALDVALGVGGLPRGRVVEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y++ LGVD++NLI+ QPDNGE
Sbjct: 68 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 128 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 188 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 245 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 305 KENARNFLKDNPDLANEIEKKIKEKLGVG 333
>gi|347758444|ref|YP_004866006.1| protein RecA [Micavibrio aeruginosavorus ARL-13]
gi|347590962|gb|AEP10004.1| protein RecA [Micavibrio aeruginosavorus ARL-13]
Length = 383
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 248/324 (76%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRL-GSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +ALDAA+ I +FGKGS+ +L G + VE +G L LD+ALG GGLP+GRI+E
Sbjct: 15 EKTKALDAALAQIERAFGKGSIMKLTGDSNPMQVEAVSTGSLGLDIALGIGGLPRGRIIE 74
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
+FGPESSGKTTLAL IAE QK GG +VDAEHA DPSY+K LGV++++L++ QPD GE
Sbjct: 75 VFGPESSGKTTLALQVIAEAQKAGGTCAIVDAEHALDPSYAKKLGVNIDDLLISQPDTGE 134
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ +DSV+AL PRAE+EGE+G +GLQARLMSQALRK++G+ S
Sbjct: 135 QALEIADTLVRSGALDVLVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKITGSIS 194
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + VG +
Sbjct: 195 RSRTIVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGTIKD--KENPVGNQ 252
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I+FGEG+SK+G ++D ++V + GAW+SY QR+GQG
Sbjct: 253 TRVKVVKNKMAPPFRQVEFDIMFGEGISKMGELIDLGVQGNLVEKSGAWFSYDGQRIGQG 312
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A Q++RDNP + ++E +R+
Sbjct: 313 RENAKQFMRDNPEVAAKLENEIRT 336
>gi|88798291|ref|ZP_01113877.1| recombinase A [Reinekea blandensis MED297]
gi|88779067|gb|EAR10256.1| recombinase A [Reinekea sp. MED297]
Length = 365
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/323 (56%), Positives = 239/323 (73%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL AA++ I FGKGSV R+G V +G L LD+ALG GGLPKGR+VEI
Sbjct: 9 NKEKALSAALSQIERQFGKGSVMRMGDQEKVNVPAISTGSLGLDIALGIGGLPKGRVVEI 68
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IAE QK GG VDAEHA DP+Y+ LGV+V++L+V QPD GE
Sbjct: 69 YGPESSGKTTLTLQVIAEAQKAGGTCAFVDAEHALDPNYAGKLGVNVDDLLVSQPDTGEQ 128
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RS A+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++GN
Sbjct: 129 ALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDHHVGLQARLMSQALRKITGNIKT 188
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
A C +IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR TG IK GDE VG
Sbjct: 189 ANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGTIKD--GDEVVGSET 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++G+G+ LG ++D + +V + GAWYSY ++GQG+
Sbjct: 247 RVKVVKNKVAPPFKQAEFQIMYGKGIYHLGEVIDLGVKIGLVEKSGAWYSYKGNKIGQGK 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
A ++L +NP + +EIE +R+
Sbjct: 307 ANAAKFLGENPEMAQEIEAAIRA 329
>gi|311030057|ref|ZP_07708147.1| recombinase A [Bacillus sp. m3-13]
Length = 346
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/352 (51%), Positives = 256/352 (72%), Gaps = 11/352 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALD A+ I FGKGS+ +LG + T PSG L LD+ALG GG P+GR+VEI
Sbjct: 3 DRKAALDMALKQIEKQFGKGSIMKLGEQTERKISTIPSGSLALDVALGAGGYPRGRVVEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R ++K +G + VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLK--QGHDIVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+K++ P+K AE +I++GEG+S+ G ++D +DIV + G+WYSY ++RLGQGR
Sbjct: 241 KIKVVKNKIAPPFKVAEVDIMYGEGISREGEVIDMGSDLDIVQKSGSWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEEF 440
+ A Q+L++N + +EI + +R H G ++++ P +EE EE
Sbjct: 301 ENAKQFLKENKDILKEIHQQIRD-------HHG-LDKDLTAPAEEEMDQEEL 344
>gi|352081858|ref|ZP_08952700.1| recA protein [Rhodanobacter sp. 2APBS1]
gi|389796541|ref|ZP_10199593.1| recombinase A [Rhodanobacter sp. 116-2]
gi|351682764|gb|EHA65860.1| recA protein [Rhodanobacter sp. 2APBS1]
gi|388448465|gb|EIM04449.1| recombinase A [Rhodanobacter sp. 116-2]
Length = 345
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/325 (54%), Positives = 244/325 (75%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL +A+ I FGKG+V R+G +ET +G L LD+ALG GGLP+GR+VEI
Sbjct: 4 NKRKALTSALGQIEKQFGKGAVMRMGDRVNEAIETISTGSLGLDIALGVGGLPRGRVVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA Q+ GG A +DAEHA DP+Y++ LGV V++L+V QPD GE
Sbjct: 64 YGPESSGKTTMTLQAIASCQRAGGTAAFIDAEHALDPTYAEKLGVKVDDLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ VDSV+ALTP+AEIEGE+G +GL ARLMSQALRK++ N K
Sbjct: 124 ALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHARLMSQALRKLTANIKK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+GC +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K KG+E +G
Sbjct: 184 SGCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVK--KGEEIIGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P++Q EFEI++GEG S+ G +++ +++ + GAWYSY R+GQG+
Sbjct: 242 RVKVVKNKVAPPFRQCEFEILYGEGTSREGEIIELGVAQNLIDKSGAWYSYNGDRIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ Q+LRDNP + EI+K +R +
Sbjct: 302 ENVRQFLRDNPAIANEIDKQLRERL 326
>gi|451818179|ref|YP_007454380.1| protein RecA [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451784158|gb|AGF55126.1| protein RecA [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 363
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/326 (55%), Positives = 245/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A+++AM+ I FGKG+V +LG + ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 EKLKAIESAMSHIEKQFGKGAVMKLGDHNISNMDAISTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH AE QK GG +DAEHA DPSY++ LGVDV++LI+ QPD GE
Sbjct: 67 YGPESSGKTTIALHIAAESQKKGGAVGYIDAEHALDPSYAQKLGVDVDSLIISQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGAID++ VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G +K
Sbjct: 127 GLEIAEALVRSGAIDVLVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL+IR IK +GD +G R
Sbjct: 187 TNCVAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDIRRIDSIK--QGDAIIGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAEF+I++ EG+S+ G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RIKVTKNKVAPPFKQAEFDIMYNEGISRFGNIVDVGVKEEIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A YL++NP + +IE +R S
Sbjct: 305 ENAKLYLKENPEVALDIENQIREKYS 330
>gi|422022022|ref|ZP_16368531.1| recombinase A [Providencia sneebia DSM 19967]
gi|414097772|gb|EKT59425.1| recombinase A [Providencia sneebia DSM 19967]
Length = 354
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/354 (52%), Positives = 250/354 (70%), Gaps = 8/354 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q+AL AA+ I FGKGS+ RLG VET +G L+LD+ALG GGLP GRIVEI
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDVALGAGGLPLGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IA Q+ G +DAEHA DP Y+K LGVD++NL+ QPD GE
Sbjct: 66 YGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D+I VDSV+ALTP+AEIEGEIG +GL AR+MSQA+RK++GN
Sbjct: 126 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKT 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ LIF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G +K+ GDE VG
Sbjct: 186 SNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKN--GDEVVGSET 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++GEG++ G ++D ++ + GAWYSY ++GQG+
Sbjct: 244 RVKVVKNKVAAPFKQAEFQILYGEGINTYGELIDLGVKHKLIEKAGAWYSYNGDKIGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVS--LPNQEENILEEF 440
+ YL+++P + +EI+K +R M+ + H G F + + + EE EEF
Sbjct: 304 ANSTTYLKEHPAIADEIDKKLREMLLN---HTGEFSSAATDFIEDSEEQAPEEF 354
>gi|387789482|ref|YP_006254547.1| protein RecA [Solitalea canadensis DSM 3403]
gi|379652315|gb|AFD05371.1| protein RecA [Solitalea canadensis DSM 3403]
Length = 339
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/332 (56%), Positives = 254/332 (76%), Gaps = 3/332 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
L++ +AL ++ + S+GKG++ +LG +E +G L LD+ALG GGLPKGRI+E
Sbjct: 6 LEKLKALQLTLDKLEKSYGKGTIMKLGDTAIEPIEAISTGSLGLDIALGIGGLPKGRIIE 65
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLA+HAIAE QK GG A ++DAEHAFD Y+K LGVDV+NL++ QPDNGE
Sbjct: 66 IYGPESSGKTTLAIHAIAESQKKGGIAAIIDAEHAFDKFYAKKLGVDVDNLLISQPDNGE 125
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID+I +DSV+AL P+ EIEGE+G ++GLQARLMSQALRK++G S
Sbjct: 126 QALEIADNLIRSGAIDIIVIDSVAALVPKGEIEGEMGDSKMGLQARLMSQALRKLTGTIS 185
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K GC IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR TG+IK G+E G R
Sbjct: 186 KTGCCCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRTGQIKD--GEEVAGNR 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
V+V++ K+KV+ P++ AEF+I++GEG+SK G ++D +I+ + G+W+SYGD +LGQG
Sbjct: 244 VKVKIVKNKVAPPFRLAEFDIMYGEGISKAGEIIDLGVEYEIIKKSGSWFSYGDSKLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVH 419
RD Q + DNP L EE+E +R +++ S+
Sbjct: 304 RDAVKQLILDNPELMEELEGKIRHVVTGESMQ 335
>gi|319405870|emb|CBI79502.1| RecA protein [Bartonella sp. AR 15-3]
Length = 347
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/324 (56%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL++A++ I SFGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRI+
Sbjct: 1 MDKTKALESALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGIGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH+IAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMSQALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D +G
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKD--RDTIIGS 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + +V + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELVDLGVKVGLVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR++ + EIE +R
Sbjct: 299 GRENAKQFLREHTEIASEIETALR 322
>gi|394989244|ref|ZP_10382078.1| recombinase A [Sulfuricella denitrificans skB26]
gi|393791663|dbj|GAB71717.1| recombinase A [Sulfuricella denitrificans skB26]
Length = 343
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 248/326 (76%), Gaps = 8/326 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALV---ETFPSGCLTLDLALG-GGLPKGRI 145
++ +AL AA++ I FGKGS+ RLG G +V + +G L LD+ALG GGLP+GR+
Sbjct: 4 NKNKALAAALSQIEKQFGKGSIMRLGD--GEVVKDIQVVSTGSLGLDIALGVGGLPRGRV 61
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
VEI+GPESSGKTTL L IAE+QKLGG A +DAEHA DP Y++ LGV+V +L++ QPD
Sbjct: 62 VEIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKLGVNVSDLLISQPDT 121
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIAD + RSG++D++ +DSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GN
Sbjct: 122 GEQALEIADMLVRSGSVDIVVIDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGN 181
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG IK KGDE +G
Sbjct: 182 IKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIK--KGDEVIG 239
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
RV+V K+KV+ P+KQAEF+I++GEG+S+ G +++ + +V + GAWYSY +++G
Sbjct: 240 SETRVKVVKNKVAPPFKQAEFDILYGEGISREGEIIELGVVHKLVEKSGAWYSYKGEKIG 299
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVRS 411
QG+D + +YL+++ + EIE VR+
Sbjct: 300 QGKDNSREYLKEHKDIAAEIEAKVRA 325
>gi|260427837|ref|ZP_05781816.1| protein RecA [Citreicella sp. SE45]
gi|260422329|gb|EEX15580.1| protein RecA [Citreicella sp. SE45]
Length = 359
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 242/324 (74%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
DRQ+ALD+A+ I FGKGS+ +LG +E +G L LD+ALG GGLPKGRI+E
Sbjct: 16 DRQKALDSALAQIERQFGKGSIMKLGGDNAMKDIEATSTGSLGLDIALGIGGLPKGRIIE 75
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LH +AE QK GG VDAEHA DP Y+K LGVD++ L++ QPD GE
Sbjct: 76 IYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLISQPDTGE 135
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+ L+ VDSV+ALTP++E+EG++G +G+ ARLMSQA+RK++G+ S
Sbjct: 136 QALEITDTLVRSGAVSLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSIS 195
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK DE VG +
Sbjct: 196 RSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGSIKDR--DEVVGNQ 253
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQ EF+I++GEG+SK G +LD +V + GAWYSYGD+R+GQG
Sbjct: 254 TRVKVVKNKVAPPFKQVEFDIMYGEGISKTGELLDLGVKAGVVDKSGAWYSYGDERIGQG 313
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A +LR+NP EIE +R+
Sbjct: 314 RENAKTFLRENPRQAMEIEDKIRA 337
>gi|39936912|ref|NP_949188.1| recombinase A [Rhodopseudomonas palustris CGA009]
gi|192292742|ref|YP_001993347.1| recombinase A [Rhodopseudomonas palustris TIE-1]
gi|39650769|emb|CAE29292.1| recombination protein recA [Rhodopseudomonas palustris CGA009]
gi|192286491|gb|ACF02872.1| recA protein [Rhodopseudomonas palustris TIE-1]
Length = 363
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV RLG ++ +ET SG L LD+ALG GGLPKGRIV
Sbjct: 15 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIV 74
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGV+V++L++ QPD+G
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHG 134
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G+IK + DE VG
Sbjct: 195 NKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGQIK--ERDEVVGN 252
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD IV + GAW+S+ QRLGQ
Sbjct: 253 QTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSHDSQRLGQ 312
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +L+ NP + +IE +R
Sbjct: 313 GRENAKAFLKANPDMTAKIEAAIR 336
>gi|238917051|ref|YP_002930568.1| Ca2+-transporting ATPase [Eubacterium eligens ATCC 27750]
gi|238872411|gb|ACR72121.1| Ca2+-transporting ATPase [Eubacterium eligens ATCC 27750]
Length = 356
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 253/324 (78%), Gaps = 6/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA+++I FGKGSV +LG + L VE P+G L+LD+ALG GG+PKGR+VE
Sbjct: 5 DKMKALDAAISNIEKQFGKGSVMKLGESTANLNVECIPTGSLSLDIALGIGGVPKGRVVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y+K +GVD++NL + QPD+GE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDSGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D++ VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTPVVS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD-EDVGV 326
K C +IF+NQ+R K+GV +GNPE T+GG ALKF++SVRL++R KI+++K + E +G
Sbjct: 185 KNNCVVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRLDVR---KIETLKQNGEVIGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV++ K+KV+ P+++AEF+I+FG+G+S G ++D A I+ + GAW+SY ++GQ
Sbjct: 242 RTRVKIVKNKVAPPFREAEFDILFGKGISTEGDLVDLASNAGIIQKSGAWFSYEGNKIGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L DNP ++EE+++ VR
Sbjct: 302 GRENAKQFLLDNPEIREEVDRRVR 325
>gi|294677288|ref|YP_003577903.1| RecA protein [Rhodobacter capsulatus SB 1003]
gi|294476108|gb|ADE85496.1| RecA protein [Rhodobacter capsulatus SB 1003]
Length = 355
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 244/324 (75%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
D+Q+AL++A+ I FGKGS+ +LG +E +G L LD+ALG GGLPKGRIVE
Sbjct: 16 DKQKALESALAQIERQFGKGSIMKLGGDTPPPEIEATSTGSLGLDIALGIGGLPKGRIVE 75
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LH IAE QK GG VDAEHA DP Y+K LGV +E+L++ QPD GE
Sbjct: 76 IYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPYYAKKLGVSLEDLLISQPDTGE 135
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+ L+ VDSV+ALTP+AEIEG++G +G QARLMSQA+RK++ +
Sbjct: 136 QALEIVDTLVRSGAVSLVVVDSVAALTPKAEIEGDMGDATVGAQARLMSQAMRKLTASIG 195
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV +G+PE TSGG ALKF+ASVRL+IR TG IK DE +G +
Sbjct: 196 RSNCMVIFINQIRMKIGVMFGSPETTSGGNALKFYASVRLDIRRTGAIKDR--DEVIGNQ 253
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+++ EF+I++GEG+SK+G ++D +V + GAWYSYGD+R+GQG
Sbjct: 254 TRVKVVKNKVAPPFREVEFDILYGEGISKVGELVDLGVKAGVVAKSGAWYSYGDERIGQG 313
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A Q+LRDNP + EIE +R+
Sbjct: 314 RENAKQFLRDNPDIAYEIEDKIRA 337
>gi|326443836|ref|ZP_08218570.1| recombinase A [Streptomyces clavuligerus ATCC 27064]
Length = 374
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRTQEPIEIIPTGSTALDVALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+ GG VDAEHA DP Y++ LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYESGQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLADEIEKKIKDKLGVG 330
>gi|358458882|ref|ZP_09169087.1| Protein recA [Frankia sp. CN3]
gi|357077844|gb|EHI87298.1| Protein recA [Frankia sp. CN3]
Length = 345
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 243/326 (74%), Gaps = 5/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +ALD A+ I+ FGKGSV RLG ++ P+G + LD+ALG GGLP+GRI+EI
Sbjct: 5 DRDKALDNALAQIDKQFGKGSVMRLGDETRMPIQVIPTGSIALDVALGIGGLPRGRIIEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q GG A +DAEHA DP Y+ LGVD +NL+V QPD GE
Sbjct: 65 YGPESSGKTTVALHAVASAQAAGGIAAFIDAEHALDPDYASKLGVDTDNLLVSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+G S
Sbjct: 125 ALEIADLLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALSN 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 185 SHTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGAEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++ AEF+I++G G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFRTAEFDIVYGGGISREGSLIDMGVEHAIIRKSGAWYTYDGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
++ A +LRDNP L +EIEK ++ +
Sbjct: 302 KENARNFLRDNPDLADEIEKRIKEKL 327
>gi|229820934|ref|YP_002882460.1| recA protein [Beutenbergia cavernae DSM 12333]
gi|229566847|gb|ACQ80698.1| recA protein [Beutenbergia cavernae DSM 12333]
Length = 350
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 246/328 (75%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL+AA+ I+ FGKGSV RLG VE P+ + LD+ALG GGLP+GR+VEI
Sbjct: 7 DKSKALEAALGQIDRQFGKGSVMRLGDDTRPPVEVIPTSSIALDVALGIGGLPRGRVVEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+LGG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHAVANAQRLGGIAGFIDAEHALDPEYAKRLGVDTDALLVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D++ +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 127 ALEIADMLIRSGALDIVVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+G T IF+NQ+R KIGV++G+PE TSGG ALKF+ASVRL++R +K +G + VG R
Sbjct: 187 SGTTAIFINQLREKIGVFFGSPETTSGGKALKFYASVRLDVRRIETLK--EGTDAVGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D IV + GAWY+Y +LGQG+
Sbjct: 245 RVKVVKNKMAPPFKQAEFDILYGHGISREGGLIDLGVDQGIVRKSGAWYTYEGDQLGQGK 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ A ++L+DNP L +EIE ++ + G
Sbjct: 305 ENARKFLKDNPELADEIETRIKEKLGIG 332
>gi|508860|gb|AAB36572.1| RecA protein [Streptomyces venezuelae ATCC 10712]
Length = 377
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E +G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRTQEPIEVISTGSTALDIALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIE+ ++ + G
Sbjct: 302 KENARNFLKDNPDLADEIERKIKEKLGVG 330
>gi|389865925|ref|YP_006368166.1| recombinase A [Modestobacter marinus]
gi|388488129|emb|CCH89700.1| Recombinase A (recA) [Modestobacter marinus]
Length = 346
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 244/329 (74%), Gaps = 3/329 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
LDR +ALD A+ I+ FGKGSV RLG + ++ P+G + LD+ALG GGLP+GR+VE
Sbjct: 4 LDRDKALDMALAQIDKQFGKGSVMRLGDSPEVAMKVIPTGSIALDIALGVGGLPRGRVVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPE+SGKTT+ALHA+A Q GG VDAEHA DP Y++A+GVD + L++ QPD GE
Sbjct: 64 VYGPEASGKTTVALHAVANAQAAGGIVAFVDAEHALDPDYARAIGVDTDALLISQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 124 QALEIADMLIRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALS 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+G T IF+NQ+R K+GV YG+PEVT+GG ALKF++SVRL++R +K +G + VG R
Sbjct: 184 NSGTTCIFINQLREKVGVVYGSPEVTTGGRALKFYSSVRLDVRRIETLK--QGTDAVGSR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
VR++V K+KV+ P+KQAE ++I+G G S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 VRIKVVKNKVAAPFKQAELDLIWGTGFSREGGLIDIGVEQGFVRKSGAWYTYDGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +LRDNP L +EIEK ++ + G
Sbjct: 302 KENARNFLRDNPDLADEIEKKIKEKLGIG 330
>gi|408681142|ref|YP_006880969.1| RecA protein [Streptomyces venezuelae ATCC 10712]
gi|341941949|sp|P48295.2|RECA_STRVP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|328885471|emb|CCA58710.1| RecA protein [Streptomyces venezuelae ATCC 10712]
Length = 378
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E +G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRTQEPIEVISTGSTALDIALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIE+ ++ + G
Sbjct: 302 KENARNFLKDNPDLADEIERKIKEKLGVG 330
>gi|349686592|ref|ZP_08897734.1| DNA recombinase RecA [Gluconacetobacter oboediens 174Bp2]
Length = 348
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGS+ R+G V+ +G L LD+ALG GGLP+GRI+E
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERPTEQVDVISTGSLGLDIALGIGGLPRGRIIE 66
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHAIAE Q+ GG +DAEHA DP Y++ LGVDV+NL++ QPD GE
Sbjct: 67 IYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGE 126
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G+ S
Sbjct: 127 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVS 186
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ LIFLNQIR KIGV +G+PE T+GG ALKF+ASVR++IR G IK DE G +
Sbjct: 187 RSNTMLIFLNQIRLKIGVMFGSPETTTGGNALKFYASVRMDIRRIGSIKD--KDEVTGNQ 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D IV + GAW+S QR+GQG
Sbjct: 245 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+LRD+P + +IE+ VR
Sbjct: 305 RENAKQFLRDHPEMAADIERRVR 327
>gi|294815485|ref|ZP_06774128.1| Protein recA [Streptomyces clavuligerus ATCC 27064]
gi|294328084|gb|EFG09727.1| Protein recA [Streptomyces clavuligerus ATCC 27064]
Length = 417
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 48 DREKALDAALAQIERQFGKGAVMRMGDRTQEPIEIIPTGSTALDVALGVGGLPRGRVVEI 107
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+ GG VDAEHA DP Y++ LGVD++NLI+ QPDNGE
Sbjct: 108 YGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDNGEQ 167
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 168 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 227
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 228 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 284
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 285 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYESGQLGQG 344
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIEK ++ + G
Sbjct: 345 KENARNFLKDNPDLADEIEKKIKDKLGVG 373
>gi|86742207|ref|YP_482607.1| recombinase A [Frankia sp. CcI3]
gi|123750817|sp|Q2J764.1|RECA_FRASC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|86569069|gb|ABD12878.1| recA protein [Frankia sp. CcI3]
Length = 345
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 243/327 (74%), Gaps = 5/327 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
LDR++ALD A+ I+ FGKGSV RLG V+ P+G + LD+ALG GGLP+GRI+E
Sbjct: 4 LDREKALDNALAQIDKQFGKGSVMRLGDDTRPPVQAIPTGSIALDVALGIGGLPRGRIIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHA+A Q GG A +DAEHA DP Y+ LGVD + L+V QPD GE
Sbjct: 64 IYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDGLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+ +
Sbjct: 124 QALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTAALA 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG
Sbjct: 184 NSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGTEAVGN 240
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P++ AEF+I++G G+S+ G ++D I+ + GAWY+Y +LGQ
Sbjct: 241 RTRVKVVKNKVAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQ 300
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMM 413
G++ A +LRDNP L EIEK ++ +
Sbjct: 301 GKENARSFLRDNPDLANEIEKKIKEKL 327
>gi|359148557|ref|ZP_09181698.1| recombinase A [Streptomyces sp. S4]
gi|421738381|ref|ZP_16176741.1| protein RecA [Streptomyces sp. SM8]
gi|406693222|gb|EKC96883.1| protein RecA [Streptomyces sp. SM8]
Length = 374
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G VE P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERPNEPVEVIPTGSTALDIALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRCKVVKNKVAPPFKQAEFDILYGHGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIE+ ++ + G
Sbjct: 302 KENARNFLKDNPDLADEIERKIKEKLGVG 330
>gi|6225929|sp|Q9ZIQ0.1|RECA_RHOVI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|3769371|gb|AAC64504.1| RecA protein [Blastochloris viridis]
Length = 348
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/324 (56%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA+ I +FGKGS+ RLG +G AL VET +G L LD+ALG GGLP+GR+V
Sbjct: 1 MDKTKALDAALTQIERAFGKGSIMRLGKSGAALEVETISTGSLGLDIALGIGGLPRGRVV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV++++L++ QPD G
Sbjct: 61 EIFGPESSGKTTLALHTVAEAQKKGGVCAFIDAEHALDPLYARKLGVNLDDLLISQPDAG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G Q G+QARLMSQALRK++ +
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSQPGMQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 181 SRSNCMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--ERDEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEG+SK G ++D +V + G+W+S+ QR+GQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIMYGEGISKAGELIDLGVKAGVVDKSGSWFSHDSQRIGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ +L+ +P + IE +R
Sbjct: 299 GRENVKGFLKGHPDVAGRIEAAIR 322
>gi|62288901|sp|Q9XBC1.3|RECA_RHOPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
Length = 349
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV RLG ++ +ET SG L LD+ALG GGLPKGRIV
Sbjct: 1 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGV+V++L++ QPD+G
Sbjct: 61 EIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 121 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G+IK + DE VG
Sbjct: 181 NKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGQIK--ERDEVVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD IV + GAW+S+ QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSHDSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +L+ NP + +IE +R
Sbjct: 299 GRENAKAFLKANPDMTAKIEAAIR 322
>gi|398792411|ref|ZP_10553042.1| protein RecA [Pantoea sp. YR343]
gi|398213140|gb|EJM99735.1| protein RecA [Pantoea sp. YR343]
Length = 356
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/346 (53%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q+AL AA+ I FGKGS+ RLG VET +G L+LD+ALG GGLP GRIVEI
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IA Q+ G +DAEHA DP Y+K LGVD++NL+ QPD GE
Sbjct: 66 YGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D+I VDSV+ALTP+AEIEGEIG +GL AR+MSQA+RK++GN +
Sbjct: 126 ALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ LIF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK +GDE VG
Sbjct: 186 SNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--EGDEVVGSET 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++GEG++ G ++D +V + GAWYSY +++GQG+
Sbjct: 244 RVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLVEKAGAWYSYNGEKIGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
+ +L++NP + EI+K +R ++ G V + +S ++EE
Sbjct: 304 ANSTNFLKENPAIANEIDKKLRDLLLSGEVAAADTAK-ISADDREE 348
>gi|417002224|ref|ZP_11941613.1| RecA protein [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479365|gb|EGC82461.1| RecA protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 353
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/327 (53%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q+ALD A +I +GKG++ ++G A V P+G + LD+ALG GG+P+GR++EI
Sbjct: 4 EKQKALDQAFKNIEKKYGKGAIMKMGEAPKISVSAIPTGAVNLDMALGVGGIPRGRVIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTLALH +AE QK +DAEHA D Y+K LGVD++NLI+ QPD GE
Sbjct: 64 FGPESSGKTTLALHIVAEDQKEDQTCAFIDAEHALDAEYAKNLGVDIDNLILSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
L+IA+ + RSGA+DLI VDSV+AL P+AEIEGE+G +GLQARLMSQALR+++G +K
Sbjct: 124 GLDIAESLVRSGAVDLIVVDSVAALVPKAEIEGEMGASHVGLQARLMSQALRRLTGVIAK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV-KGDEDVGVR 327
+ T+IF+NQ+R K+GV +GNPE T GG ALKF++SVRL+IR ++K++ +GDE +G R
Sbjct: 184 SNTTVIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDIR---RLKTITQGDESIGSR 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+K EF+I++G+G+SK G +LD A +D+V + G+W+SY D++LGQG
Sbjct: 241 TRVKVVKNKVAPPFKVVEFDIMYGQGISKSGVLLDTAVDLDVVDKAGSWFSYKDEKLGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMS 414
R+K YL +NP L +IE VR+ ++
Sbjct: 301 REKVKDYLEENPELASQIEADVRATIN 327
>gi|284097292|ref|ZP_06385430.1| recombinase A [Candidatus Poribacteria sp. WGA-A3]
gi|283831198|gb|EFC35170.1| recombinase A [Candidatus Poribacteria sp. WGA-A3]
Length = 349
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 246/321 (76%), Gaps = 6/321 (1%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFG 150
+AL+ A+ I FGKGS+ +LG+ + V+ +G L LDLALG GGLP+GR+VEIFG
Sbjct: 2 KALELAVTQIEKQFGKGSIMKLGTGDVSDDVQATSTGSLALDLALGVGGLPRGRVVEIFG 61
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTL LHAIAE QK GG+A +DAEHA D SY+K LGV +++L+V QPD GE AL
Sbjct: 62 PESSGKTTLCLHAIAEAQKTGGSAAFIDAEHALDVSYAKKLGVKIDDLLVAQPDTGEQAL 121
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EIA+ + RSGAIDL+ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G SK+
Sbjct: 122 EIAETLVRSGAIDLVVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLTGAISKSL 181
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVRVR 329
T++F+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR +I+S+K G E +G RVR
Sbjct: 182 TTVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIR---RIESIKDGQEVIGSRVR 238
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K + P++QAEF+I+F EGVSK+G ++D I+ + GAWYSY ++RLGQGR+
Sbjct: 239 VKVVKNKTAPPFRQAEFDIMFAEGVSKVGELIDLGVEKKIIDKAGAWYSYREERLGQGRE 298
Query: 390 KALQYLRDNPLLQEEIEKVVR 410
+L++NP +EIE +R
Sbjct: 299 AVKAFLKENPETAKEIETKIR 319
>gi|73662789|ref|YP_301570.1| recombinase A [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|418576329|ref|ZP_13140475.1| recombinase A [Staphylococcus saprophyticus subsp. saprophyticus
KACC 16562]
gi|123775345|sp|Q49X73.1|RECA_STAS1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|72495304|dbj|BAE18625.1| RecA recombinase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|379325391|gb|EHY92523.1| recombinase A [Staphylococcus saprophyticus subsp. saprophyticus
KACC 16562]
Length = 349
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/348 (54%), Positives = 258/348 (74%), Gaps = 5/348 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALD + ++ SFGKG+V +LG V + SG +TLD ALG GG PKGRIVEI
Sbjct: 4 DRQKALDTVIKNMEKSFGKGAVMKLGDNKARKVSSVSSGSVTLDNALGVGGYPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ALGVD++NL + QPD+GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVYAEALGVDIQNLYLSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 124 GLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T +F+NQIR K+GV +GNPEVT GG ALKF++SVRLE+R ++K +G E VG R
Sbjct: 184 SNTTAVFINQIREKVGVMFGNPEVTPGGRALKFYSSVRLEVRRAEQLK--QGQEIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++G+G+SK G ++D +IV + GAWYSY +R+GQG+
Sbjct: 242 KIKVVKNKVAPPFRVAEVDIMYGKGISKEGELIDLGAEHEIVNKSGAWYSYNGERMGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS--DGSVHQGSFLRNVSLPNQEE 434
+ YL++NP ++EEI++ +R + DG V + +L ++EE
Sbjct: 302 ENVKLYLKENPAIREEIDQKLREKLGIFDGDVEEKEAESPATLFDEEE 349
>gi|319899071|ref|YP_004159164.1| recombinase A [Bartonella clarridgeiae 73]
gi|319403035|emb|CBI76590.1| RecA protein [Bartonella clarridgeiae 73]
Length = 347
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL+AA++ I SFGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRI+
Sbjct: 1 MDKTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH+IAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMSQALRK++ +
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSQALRKLTASI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D +G
Sbjct: 181 FRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKD--RDTVIGS 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SKLG ++D + +V + G+W+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGLVEKSGSWFSYNSQRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+LR+ + EIE +R
Sbjct: 299 GRENAKQFLREYAEIAAEIETALR 322
>gi|410727047|ref|ZP_11365270.1| protein RecA [Clostridium sp. Maddingley MBC34-26]
gi|410599382|gb|EKQ53935.1| protein RecA [Clostridium sp. Maddingley MBC34-26]
Length = 362
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 245/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A+++AM+ I FGKGSV +LG + ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 EKLKAIESAMSHIEKQFGKGSVMKLGDHNISNMDAISTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH AE QK GG +DAEHA DPSY++ LGVDV++LI+ QPD GE
Sbjct: 67 YGPESSGKTTVALHIAAESQKKGGAVGYIDAEHALDPSYAQKLGVDVDSLIISQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGAID++ VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G +K
Sbjct: 127 GLEIAEALVRSGAIDVLVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C IF+NQ+R K+GV +G+PE T+GG ALKF+AS+RL+IR IK +GD +G R
Sbjct: 187 TNCVAIFINQLREKVGVMFGSPETTTGGRALKFYASIRLDIRRIDSIK--QGDAIIGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++ EG+S+ G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKVTKNKVAPPFKQAEFDIMYNEGISRYGNIVDVGVKEEIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A YL++NP + +IE +R S
Sbjct: 305 ENAKLYLKENPEVALDIENQIREKYS 330
>gi|294631803|ref|ZP_06710363.1| RecA protein [Streptomyces sp. e14]
gi|292835136|gb|EFF93485.1| RecA protein [Streptomyces sp. e14]
Length = 375
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERSKEPIEVIPTGSTALDVALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y++ LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIE+ ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIERKIKEKLGVG 330
>gi|256822657|ref|YP_003146620.1| recA protein [Kangiella koreensis DSM 16069]
gi|256796196|gb|ACV26852.1| recA protein [Kangiella koreensis DSM 16069]
Length = 346
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/326 (57%), Positives = 245/326 (75%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I FGKGS+ RLG A + T +G L LD+ALG GGLPKGR+VE
Sbjct: 4 NKKKALGAALTQIERQFGKGSIMRLGDNSAARGIGTISTGSLGLDIALGIGGLPKGRVVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLAL AIA QK GG A VDAEHA DP+Y++ LGV++++LIV QPD GE
Sbjct: 64 IYGPESSGKTTLALQAIASCQKDGGTAAFVDAEHALDPTYAEKLGVNLDDLIVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++ N
Sbjct: 124 QALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +F+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G+IK +GDE VG
Sbjct: 184 RSNTLCVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQIK--QGDEIVGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++GEG S G +LD D+V + GAWYSY ++GQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFQILYGEGTSLEGEILDWGVKHDLVEKSGAWYSYNGNKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+ +Q+L+DN ++EEIE +RS +
Sbjct: 302 KQNVIQFLKDNADIKEEIEGKLRSEL 327
>gi|291454543|ref|ZP_06593933.1| RecA protein [Streptomyces albus J1074]
gi|291357492|gb|EFE84394.1| RecA protein [Streptomyces albus J1074]
Length = 377
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G VE P+G LD+ALG GGLP+GR+VE+
Sbjct: 8 DREKALDAALAQIERQFGKGAVMRMGERPNEPVEVIPTGSTALDIALGVGGLPRGRVVEV 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 68 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 128 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G + VG R
Sbjct: 188 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTDAVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 245 TRCKVVKNKVAPPFKQAEFDILYGHGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIE+ ++ + G
Sbjct: 305 KENARNFLKDNPDLADEIERKIKEKLGVG 333
>gi|340779200|ref|ZP_08699143.1| recA protein [Acetobacter aceti NBRC 14818]
Length = 343
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/323 (55%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGS+ RLG + +G L LD+ALG GG+P+GRIVE
Sbjct: 3 MDKTKALEGALSQIERAFGKGSIMRLGQRPKEEADAISTGSLGLDIALGIGGMPRGRIVE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH IAE QK GG +DAEHA DP Y++ LGVDV+NL++ QPD GE
Sbjct: 63 IYGPESSGKTTLALHIIAEAQKKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G S
Sbjct: 123 QALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ L+FLNQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK DE VG +
Sbjct: 183 RSNTLLVFLNQIRLKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKD--KDEVVGNQ 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D +V + GAW+SY QR+GQG
Sbjct: 241 TRVKVVKNKMAPPFRQVEFDIMYGEGISKMGELIDLGVKAGVVEKSGAWFSYDSQRVGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A +LR++P + IE +R
Sbjct: 301 RENAKNFLREHPEMAHAIEHRIR 323
>gi|307566245|ref|ZP_07628691.1| protein RecA [Prevotella amnii CRIS 21A-A]
gi|307345049|gb|EFN90440.1| protein RecA [Prevotella amnii CRIS 21A-A]
Length = 341
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 242/324 (74%), Gaps = 3/324 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL AAM I FGKG++ ++G ++ P+G L LD+ALG GG P+GRIVEIF
Sbjct: 16 KLKALQAAMAKIEKDFGKGAIMKMGDRITEKIDVIPTGSLGLDVALGVGGFPRGRIVEIF 75
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE QK GG A +DAEHAFDP+Y+ ALGVD++NL + QPDNGE A
Sbjct: 76 GPESSGKTTLALHAIAEAQKQGGVAAFIDAEHAFDPTYAAALGVDIDNLWISQPDNGEQA 135
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
L+IAD++ S A+DL+ VDSV+ALTP+ EIEGE+G +GL ARLMSQALRK++ SK
Sbjct: 136 LQIADQLISSSAVDLLVVDSVAALTPKKEIEGEMGDSVVGLHARLMSQALRKLTSTISKT 195
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
IF+NQ+R KIG+ +GNPE T+GG ALKF+ASVR+++R + +IK GD +G +
Sbjct: 196 NTCCIFINQLREKIGMTFGNPETTTGGNALKFYASVRVDVRKSTQIKD--GDNVLGNLTK 253
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P+++ EF+IIFGEG+SKLG ++D DI+ + G+W+SYGD +L QGRD
Sbjct: 254 VKIVKNKVAPPFRKCEFDIIFGEGISKLGEIIDLGVEYDIIKKSGSWFSYGDTKLAQGRD 313
Query: 390 KALQYLRDNPLLQEEIEKVVRSMM 413
L+DNP L EE+E++++ +
Sbjct: 314 GVKNMLKDNPELSEELERLIKEAI 337
>gi|406837216|ref|ZP_11096810.1| recombinase A [Lactobacillus vini DSM 20605]
Length = 347
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/322 (55%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R+ ALDAA+ I +FGKGS+ R+G + T SG L LD ALG GG P+GRI+EI
Sbjct: 4 ERKAALDAALKKIEKNFGKGSIMRMGDKADTKISTVSSGSLALDEALGVGGYPRGRIIEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AE+QK GG A +DAE+A DP+Y+ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAVAEIQKQGGVAAYIDAENALDPAYATNLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEI D + SGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEITDALVSSGAIDIVVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE T GG ALKF++++RLE+R +IK+ G + +G RV
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTIRLEVRRAEQIKN--GTDIIGNRV 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+K+AE +I++GEG+SK G ++D A D++ + G+WYSYGD+R+GQGR
Sbjct: 242 RIKVVKNKVAPPFKRAEVDIMYGEGISKTGELVDMAVEKDLLNKSGSWYSYGDERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A QYL+D+P L E+ K VR
Sbjct: 302 ENAKQYLKDHPDLMAELIKKVR 323
>gi|402819550|ref|ZP_10869118.1| hypothetical protein IMCC14465_03520 [alpha proteobacterium
IMCC14465]
gi|402511697|gb|EJW21958.1| hypothetical protein IMCC14465_03520 [alpha proteobacterium
IMCC14465]
Length = 363
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/324 (56%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
DR +AL+AA+ I ++GKGSV +LG + + + P+G L LD+ALG GGLP+GRI+E
Sbjct: 14 DRNKALEAALGQIERNYGKGSVMKLGDPKNIVEIGSIPTGSLGLDIALGIGGLPQGRIIE 73
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH +AE QK GG +DAEHA DP Y+ LG DVE L++ QPDNGE
Sbjct: 74 IYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPLYASKLGADVEELLISQPDNGE 133
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID++ +DSV+ALTPRAE+EG++G GLQARLMSQALRK++ + S
Sbjct: 134 QALEIADTLVRSGAIDVLVIDSVAALTPRAELEGDMGDSLPGLQARLMSQALRKLTASIS 193
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +IF+NQIR KIGV +G+PE T+GG ALKF+AS RL+IR G IK +E VG +
Sbjct: 194 KSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASCRLDIRRIGAIKDR--EEVVGNQ 251
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++ EF+I++GEG+SK G ++D ++V + G+WYSYGDQR+GQG
Sbjct: 252 TRVKVVKNKVAPPFRVVEFDIMYGEGISKTGELIDLGVKAEVVDKSGSWYSYGDQRIGQG 311
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
++ A Q+L+DNP + EIE+ VR+
Sbjct: 312 KENARQFLKDNPEIAAEIEEKVRA 335
>gi|374709733|ref|ZP_09714167.1| recombinase A [Sporolactobacillus inulinus CASD]
Length = 348
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/345 (52%), Positives = 250/345 (72%), Gaps = 3/345 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R+ ALD+A+ I FGKGS+ RLG V T SG L LD+A+G GG P+GRI+EI
Sbjct: 6 ERKAALDSALRQIEKQFGKGSIMRLGERPEQRVSTVSSGSLALDIAMGVGGYPRGRIIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE Q+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 66 YGPESSGKTTVALHAIAEAQQSGGQAAFIDAEHALDPVYAEHLGVNIDELLLSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 126 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAISK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF+ASVRLE+R +K G++ VG R
Sbjct: 186 SKTTAIFINQIREKVGVMFGNPETTPGGRALKFYASVRLEVRRAETLKI--GNDIVGNRA 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++G+G+S+ G +LD +D++ + G+WYSY +RLGQGR
Sbjct: 244 RIKVVKNKVAPPFKQAEVDIMYGQGISQEGEILDIGSDLDVIEKSGSWYSYNKERLGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQE 433
+ A YL++N ++E+I+ +R + + +LP +E
Sbjct: 304 ENAKLYLKENEPVKEDIKHQIRVHYHLDETAEETADEAATLPTKE 348
>gi|357384882|ref|YP_004899606.1| recombinase A [Pelagibacterium halotolerans B2]
gi|351593519|gb|AEQ51856.1| RecA protein [Pelagibacterium halotolerans B2]
Length = 357
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 247/327 (75%), Gaps = 3/327 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
D +D+ +AL+AA+ I +FGKGS+ +LG VE+ +G L LD+ALG GGLP+G
Sbjct: 10 DGGSMDKNKALEAALGQIERNFGKGSIMKLGENTQVNVESISTGSLGLDIALGIGGLPRG 69
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RI+E+FGPESSGKTTLALH +AE QK GG +DAEHA DP+Y++ LGV++++L++ QP
Sbjct: 70 RIIEVFGPESSGKTTLALHVLAEAQKSGGICAFIDAEHALDPTYARKLGVNIDDLLISQP 129
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEIAD + RSGAID++ VDSV+ALTPRAE+EGE+G GLQARLMSQA+RK++
Sbjct: 130 DAGEQALEIADTLVRSGAIDVLVVDSVAALTPRAELEGEMGDSLPGLQARLMSQAMRKLT 189
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
+ SK+ +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK +E
Sbjct: 190 ASISKSKAMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKDR--EEV 247
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
VG + RV+V K+K++ P++Q EF+I++GEG+SK G +LD IV + GAW+SY QR
Sbjct: 248 VGNQTRVKVVKNKMAPPFRQVEFDIMYGEGISKTGELLDLGVKAGIVEKSGAWFSYDSQR 307
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVR 410
LGQGR+ + Q+L+DNP + +IE VR
Sbjct: 308 LGQGRENSRQFLKDNPEIAHQIENGVR 334
>gi|317129135|ref|YP_004095417.1| recA protein [Bacillus cellulosilyticus DSM 2522]
gi|315474083|gb|ADU30686.1| recA protein [Bacillus cellulosilyticus DSM 2522]
Length = 349
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 244/326 (74%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I FGKGS+ +LG V T SG L LD+ALG GG PKGRI+EI
Sbjct: 3 DRKQALDMALRQIEKQFGKGSIMKLGEQAEQRVSTVSSGALALDIALGVGGYPKGRIIEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAE Q+ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAETQRNGGQAAFIDAEHALDPIYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D++ +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K +G++ VG +
Sbjct: 183 SKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLK--QGNDMVGNKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++GEG+S+ G +LD A +DIV + GAWYSY ++RLGQGR
Sbjct: 241 KIKVVKNKVAPPFRTAEVDIMYGEGISREGSLLDIASDLDIVQKSGAWYSYNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ + Q+L++N + IEK +R S
Sbjct: 301 ENSKQFLKENEEITLAIEKQIREYHS 326
>gi|316932870|ref|YP_004107852.1| recA protein [Rhodopseudomonas palustris DX-1]
gi|315600584|gb|ADU43119.1| recA protein [Rhodopseudomonas palustris DX-1]
Length = 363
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV +LG A+ +ET SG L LD+ALG GGLPKGRIV
Sbjct: 15 MDKSKALSAALSQIERQFGKGSVMKLGKNDRAMEIETISSGSLGLDIALGVGGLPKGRIV 74
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV+V++L++ QPD+G
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 134
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 195 NKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--ERDEVVGN 252
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD IV + GAW+S+ QRLGQ
Sbjct: 253 QTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSHDSQRLGQ 312
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR NP + +IE +R
Sbjct: 313 GRENAKAFLRANPDMTAKIEAAIR 336
>gi|398814335|ref|ZP_10573016.1| protein RecA [Brevibacillus sp. BC25]
gi|398036604|gb|EJL29813.1| protein RecA [Brevibacillus sp. BC25]
Length = 352
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/348 (52%), Positives = 253/348 (72%), Gaps = 8/348 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL++A+ I FGKGS+ +LG + T SG L LD+ALG GG P+GRIVEI
Sbjct: 3 DRRAALESALRQIEKQFGKGSIMKLGEVSNIQISTASSGALALDIALGVGGFPRGRIVEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ+ GG A +DAEHA DP Y+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQRQGGQAAFIDAEHALDPVYAAKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I VDSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG +K
Sbjct: 123 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF+ASVRL++R IK G++ +G +
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRKAESIKV--GNDILGSKT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+S+ G +LD +D+V + GAWYS+ ++RLGQGR
Sbjct: 241 KIKVVKNKVAPPFKVAEVDIMYGEGISREGSILDIGSEIDVVQKSGAWYSFNEERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS--DGSVHQGSFLRNVSLPNQEE 434
+ + +L++NP + +IE VR S GSV +G + + P Q+E
Sbjct: 301 ENSKVFLKENPHIASQIETKVREYFSLNPGSVPEGEAVND---PEQDE 345
>gi|296448224|ref|ZP_06890120.1| recA protein [Methylosinus trichosporium OB3b]
gi|296254264|gb|EFH01395.1| recA protein [Methylosinus trichosporium OB3b]
Length = 358
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 242/324 (74%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG A+ +ET +G L LD+ALG GGLP+GR+V
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTL LH IAE QK GG VDAEHA DP Y++ LGV++E L++ QPD G
Sbjct: 74 EIYGPESSGKTTLTLHVIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLEELLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ VDSV+ALTPRAEIEGE+G Q GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGEVQPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK DE G
Sbjct: 194 SRSNTLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGSIKDR--DEVTGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+KV+ P+KQ EF+I++GEGVSK+G ++D +V + GAW+S+ QRLGQ
Sbjct: 252 QTRVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELVDLGVKAGVVDKSGAWFSFDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +L+ N E IE +R
Sbjct: 312 GRENAKAFLKQNKEAAERIEAAIR 335
>gi|256832273|ref|YP_003161000.1| recA protein [Jonesia denitrificans DSM 20603]
gi|256685804|gb|ACV08697.1| recA protein [Jonesia denitrificans DSM 20603]
Length = 364
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/319 (56%), Positives = 241/319 (75%), Gaps = 3/319 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+AA+ I+ FGKGS+ RLG V+ P+G + LD+ALG GGLP+GRIVE+
Sbjct: 6 DREKALEAALGQIDRQFGKGSIMRLGDDNRPKVDIIPTGSIALDVALGIGGLPRGRIVEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y++ LGVD + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQKNGGIAAFIDAEHALDPVYAQKLGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGAIDLI VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 126 ALEITDMLIRSGAIDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALST 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR +K +G E VG R
Sbjct: 186 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRMDIRRIETLK--EGSEPVGNRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D IV + G+W++Y +LGQG+
Sbjct: 244 RVKVVKNKMAPPFKQAEFDILYGVGISREGSLIDMGVDNGIVRKSGSWFTYEGDQLGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEK 407
+ A ++LRDNP L EIE+
Sbjct: 304 ENARKFLRDNPELAAEIER 322
>gi|254449721|ref|ZP_05063158.1| protein RecA [Octadecabacter arcticus 238]
gi|198264127|gb|EDY88397.1| protein RecA [Octadecabacter arcticus 238]
Length = 371
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/328 (54%), Positives = 244/328 (74%), Gaps = 3/328 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
D + D+Q+ALD+A+ I FGKGS+ LG +E+ +G L LD+ALG GG+PKG
Sbjct: 11 DKKSADKQKALDSALAQIERQFGKGSIMTLGGNAIQEIESTSTGSLGLDIALGIGGIPKG 70
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
R+VEI+GPESSGKTTL LH +AE QK GG VDAEHA DP Y+K LGV+++ L++ QP
Sbjct: 71 RVVEIYGPESSGKTTLTLHCLAEEQKKGGVCAFVDAEHALDPGYAKKLGVNLDELLISQP 130
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEI D + RSGA+ +I VDSV+ALTP++E+EG++G +G+ ARLMSQA+RK++
Sbjct: 131 DTGEQALEIVDTLVRSGAVSMIVVDSVAALTPKSELEGDMGDHSVGVHARLMSQAMRKLT 190
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
G+ S+ CT+IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G +K DE
Sbjct: 191 GSISRTKCTVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGSVKDR--DEI 248
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
VG RV+V K+KV+ P+KQ EF+I++GEG+SKLG ++D IV + G+W+SYGD+R
Sbjct: 249 VGNSTRVKVVKNKVAPPFKQVEFDIMYGEGISKLGELVDMGVKAGIVEKSGSWFSYGDER 308
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+GQGR+ A +LR+NP EIE +R+
Sbjct: 309 IGQGRENAKTFLRENPHFANEIEDKIRA 336
>gi|402817478|ref|ZP_10867066.1| protein RecA [Paenibacillus alvei DSM 29]
gi|402505000|gb|EJW15527.1| protein RecA [Paenibacillus alvei DSM 29]
Length = 387
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/327 (55%), Positives = 245/327 (74%), Gaps = 4/327 (1%)
Query: 86 SRFL-DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKG 143
S F+ DR+ AL+ A+ I FGKGS+ +LG + VE PSG L LD+ALG GGLP+G
Sbjct: 33 SEFVSDRRAALEMALRQIEKQFGKGSIMKLGESNHMQVEIVPSGSLALDIALGIGGLPRG 92
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RI+E++GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y+ LGV+++ L++ QP
Sbjct: 93 RIIEVYGPESSGKTTVALHAIAEVQKTGGQAAFIDAEHALDPLYASKLGVNIDELLLSQP 152
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
D GE ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+S
Sbjct: 153 DTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLS 212
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 323
G SK+ IF+NQ+R K+GV +GNPE T GG ALKF++SVRLE+R IK +G +
Sbjct: 213 GAISKSKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLEVRRVETIK--QGTDM 270
Query: 324 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQR 383
+G R R++V K+KV+ P+KQA+ +I++GEG+S+ G ++D MDIV + GAWYS+ +R
Sbjct: 271 IGNRTRIKVVKNKVAPPFKQADIDIMYGEGISREGSIVDIGTEMDIVQKSGAWYSFEGER 330
Query: 384 LGQGRDKALQYLRDNPLLQEEIEKVVR 410
LGQGR+ A Q+L+++ + IE +R
Sbjct: 331 LGQGRENAKQFLKEHSEIALSIENQIR 357
>gi|392382934|ref|YP_005032131.1| recombinase A (recA) [Azospirillum brasilense Sp245]
gi|356877899|emb|CCC98755.1| recombinase A (recA) [Azospirillum brasilense Sp245]
Length = 359
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/324 (56%), Positives = 244/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+Q+ALDAA+ I +FGKGS+ +LG+ + E +G L LD+ALG GGLP+GRI+
Sbjct: 14 MDKQKALDAALAQIERAFGKGSIMKLGARENTVETEVVSTGSLGLDIALGIGGLPRGRII 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIA+ QK GG VDAEHA DPSY++ LGV+V+ L++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKGGGTCAFVDAEHALDPSYARKLGVNVDELLISQPDAG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ VDSV+AL PRAE+EGE+G +GL ARLMSQALRK++G+
Sbjct: 134 EQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ C +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK + VG
Sbjct: 194 AKSNCLVIFINQIRLKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKDR--ETVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P++ EF+I++GEGVSK+G +LD +V + GAW+SY R+GQ
Sbjct: 252 QTRVKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVEKSGAWFSYDGTRIGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A YLR+NP + IE +R
Sbjct: 312 GRENAKNYLRNNPATADAIEAKIR 335
>gi|88855434|ref|ZP_01130098.1| recombination repairing protein [marine actinobacterium PHSC20C1]
gi|88815341|gb|EAR25199.1| recombination repairing protein [marine actinobacterium PHSC20C1]
Length = 386
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 249/326 (76%), Gaps = 6/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+++L+ A+ I+ FGKGSV RLGS A VE P+G + LD+ALG GGLP+GRIVEI
Sbjct: 6 DREKSLETALAQIDRQFGKGSVMRLGSDERAPVEVIPTGSIALDVALGIGGLPRGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHAIA Q+ GG A +DAEHA DP Y+ LGVD++ L+V QPD GE
Sbjct: 66 YGPESSGKTTLTLHAIANAQRNGGIAAFIDAEHALDPEYAAKLGVDIDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG+IDLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S+
Sbjct: 126 ALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLTGGLSQ 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
T+IF+NQ+R KIGV++G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 186 TNTTMIFINQLREKIGVFFGSPETTAGGKALKFYASVRLDIR---RIETLKDGTDAVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D +IV + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKMAPPFKQAEFDILYGIGISREGSLIDFGVDHEIVRKSGAWYTYDGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIE-KVVRSM 412
++K+ +L NP + EIE K++R +
Sbjct: 303 KEKSRAFLIQNPAIALEIEQKIMRKL 328
>gi|183601363|ref|ZP_02962733.1| recombinase A [Bifidobacterium animalis subsp. lactis HN019]
gi|219683419|ref|YP_002469802.1| recombinase A [Bifidobacterium animalis subsp. lactis AD011]
gi|241191138|ref|YP_002968532.1| recombinase A [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196544|ref|YP_002970099.1| recombinase A [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|384191391|ref|YP_005577139.1| recombinase A [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192537|ref|YP_005578284.1| recombinase A [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|384194131|ref|YP_005579877.1| recombinase A, RecA protein [Bifidobacterium animalis subsp. lactis
BLC1]
gi|384195696|ref|YP_005581441.1| recombinase A [Bifidobacterium animalis subsp. lactis V9]
gi|387821003|ref|YP_006301046.1| recombinase A [Bifidobacterium animalis subsp. lactis B420]
gi|387822681|ref|YP_006302630.1| recombinase A [Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679664|ref|ZP_17654540.1| recombinase A [Bifidobacterium animalis subsp. lactis BS 01]
gi|183218969|gb|EDT89610.1| recombinase A [Bifidobacterium animalis subsp. lactis HN019]
gi|219621069|gb|ACL29226.1| protein RecA [Bifidobacterium animalis subsp. lactis AD011]
gi|240249530|gb|ACS46470.1| recombinase A [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251098|gb|ACS48037.1| recombinase A [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|289178883|gb|ADC86129.1| RecA [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794127|gb|ADG33662.1| recombinase A [Bifidobacterium animalis subsp. lactis V9]
gi|340365274|gb|AEK30565.1| RecA [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|345282990|gb|AEN76844.1| recombinase A, RecA protein [Bifidobacterium animalis subsp. lactis
BLC1]
gi|366041308|gb|EHN17812.1| recombinase A [Bifidobacterium animalis subsp. lactis BS 01]
gi|386653704|gb|AFJ16834.1| RecA protein [Bifidobacterium animalis subsp. lactis B420]
gi|386655289|gb|AFJ18418.1| RecA protein [Bifidobacterium animalis subsp. lactis Bi-07]
Length = 382
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/322 (55%), Positives = 244/322 (75%), Gaps = 5/322 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R+ AL++A+ + FGKGS RLG +E P+G L LD ALG GGLP+GRIVEI+
Sbjct: 24 REDALNSALAQVEKQFGKGSAMRLGDRPEQDIEVIPTGSLALDTALGIGGLPRGRIVEIY 83
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++LIV QPDNGE A
Sbjct: 84 GPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDTDSLIVSQPDNGEQA 143
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRKM+G ++A
Sbjct: 144 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALAQA 203
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG-DEDVGVRV 328
T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR +I+++K DE +G R
Sbjct: 204 NTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRMDIR---RIQTLKDKDEPIGNRT 260
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+K AEF++++G+G+S+ G +LD A D+V + G+W++Y ++LGQGR
Sbjct: 261 RVKVVKNKMAPPFKTAEFDMLYGQGISQEGSILDMALETDVVRKSGSWFTYNGEQLGQGR 320
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ ++L DNP L EEI V+
Sbjct: 321 ENVRKFLIDNPKLAEEISTQVK 342
>gi|297539361|ref|YP_003675130.1| recombination protein RecA [Methylotenera versatilis 301]
gi|297258708|gb|ADI30553.1| recA protein [Methylotenera versatilis 301]
Length = 342
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/326 (54%), Positives = 244/326 (74%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAG-GALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +AL AA+ I FGKGS+ R+G G ++ +G L LD+ALG GGLP+GR++E
Sbjct: 4 NKSKALSAALAQIEKQFGKGSIMRMGDGNIGEDIQAVSTGSLGLDIALGIGGLPRGRVIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L IA++QK GG A +DAEHA DP Y+ LGV+V +L++ QPD GE
Sbjct: 64 IYGPESSGKTTLTLSVIAQMQKSGGVAAFIDAEHALDPQYAAKLGVNVPDLLISQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSG++D++ +DSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GN
Sbjct: 124 QALEIVDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLTGNIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG IK KGDE +G
Sbjct: 184 RTNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIK--KGDEVIGSE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++GEG+S+ G +++ + +V + G+WYSY +++GQG
Sbjct: 242 TRVKVIKNKVAPPFKQAEFDILYGEGISREGEIIELGANLKMVEKAGSWYSYNGEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+D A ++LR NP + EI+ +R+ M
Sbjct: 302 KDNAREFLRSNPAIANEIDAKIRANM 327
>gi|325298694|ref|YP_004258611.1| protein recA [Bacteroides salanitronis DSM 18170]
gi|324318247|gb|ADY36138.1| Protein recA [Bacteroides salanitronis DSM 18170]
Length = 350
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/351 (54%), Positives = 262/351 (74%), Gaps = 6/351 (1%)
Query: 66 KKISCEFDGKVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETF 125
KK F+G + G SS +S +R +AL AAM+ I SFGKGS+ ++G VE
Sbjct: 3 KKDELAFEGGIEGASSKPNNS---ERLKALQAAMDKIEKSFGKGSIMKMGDDHVEEVEVI 59
Query: 126 PSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFD 184
P+G + L+ ALG GG PKGRI+EI+GPESSGKTTLA+HAIAE QKLGG A +DAEHAFD
Sbjct: 60 PTGSIALNAALGVGGYPKGRIIEIYGPESSGKTTLAIHAIAEAQKLGGIAAFIDAEHAFD 119
Query: 185 PSYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIG 244
Y+ LGVD++NL + QPDNGE ALEIA+++ RS AID+I +DSV+ALTP+AEIEG++G
Sbjct: 120 RFYAAKLGVDIDNLWISQPDNGEQALEIAEQLIRSSAIDIIVIDSVAALTPKAEIEGDMG 179
Query: 245 MQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS 304
++GLQARLMSQALRK++ SK T IF+NQ+R KIGV +GNPE T+GG ALKF+AS
Sbjct: 180 DNKVGLQARLMSQALRKLTSAISKTNTTCIFINQLREKIGVMFGNPETTTGGNALKFYAS 239
Query: 305 VRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCA 364
VRL+IR ++K G++ +G +VRV+V K+KV+ P+++AEF+I+FGEG+S+ G ++D
Sbjct: 240 VRLDIRRISQLKD--GEDVIGNQVRVKVVKNKVAPPFRKAEFDIMFGEGISRSGEIIDLG 297
Query: 365 EMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSD 415
+ I+ + G+WYSY D +LGQGRD A Q ++DNP L EE+E ++ + + D
Sbjct: 298 SELGIIKKSGSWYSYNDTKLGQGRDAAKQCIQDNPELAEELEGLIFTALKD 348
>gi|260437155|ref|ZP_05790971.1| protein RecA [Butyrivibrio crossotus DSM 2876]
gi|292810467|gb|EFF69672.1| protein RecA [Butyrivibrio crossotus DSM 2876]
Length = 343
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/334 (53%), Positives = 255/334 (76%), Gaps = 6/334 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ RALDAA++ I SFGKG+V +LG A+ VET P+G L+LD+ALG GG+PKGRIVE
Sbjct: 5 DKLRALDAALSSIERSFGKGAVMKLGDPAAAMNVETVPTGSLSLDIALGMGGVPKGRIVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH +AEVQK GG A +DAEHA DP Y++ +GV+++ L + QPDNGE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVNIDELYISQPDNGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + + RSGA+D+I VDSV+AL P+AEI+G++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETLVRSGAVDIIIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD-EDVGV 326
K C +IF+NQ+R K+GV +GNPE T+GG ALKF++S+R+++R +I+S+K + E VG
Sbjct: 185 KTNCIVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRMDVR---RIESLKANGEVVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+K++ P+++AEF+I+FG+G+S+ G +LD ++V + GAW++Y ++GQ
Sbjct: 242 RTRVKVVKNKIAPPFREAEFDIMFGKGISREGDILDLGVTSNVVQKSGAWFAYNGDKIGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQ 420
GR+ A YL ++P + EEIE+ VR + H+
Sbjct: 302 GRENAKIYLSEHPDIMEEIEQKVREHFAVDVSHE 335
>gi|349699591|ref|ZP_08901220.1| DNA recombinase RecA [Gluconacetobacter europaeus LMG 18494]
Length = 348
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/323 (55%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGS+ R+G V+ +G L LD+ALG GGLP+GRI+E
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERPTEQVDVISTGSLGLDIALGIGGLPRGRIIE 66
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHAIAE Q+ GG +DAEHA DP Y++ LGVDV+NL++ QPD GE
Sbjct: 67 IYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGE 126
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G+ S
Sbjct: 127 QALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVS 186
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ LIFLNQIR KIGV +G+PE T+GG ALKF+ASVR++IR G IK DE G +
Sbjct: 187 RSNTMLIFLNQIRLKIGVMFGSPETTTGGNALKFYASVRMDIRRIGSIKD--KDEVTGNQ 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D IV + GAW+S QR+GQG
Sbjct: 245 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+LRD+P + +IE+ VR
Sbjct: 305 RENAKQFLRDHPEMAADIERRVR 327
>gi|182416662|ref|ZP_02948069.1| protein RecA [Clostridium butyricum 5521]
gi|182379488|gb|EDT76977.1| protein RecA [Clostridium butyricum 5521]
Length = 359
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A+++AM++I FGKGSV +LG ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 EKLKAIESAMSNIEKQFGKGSVMKLGDHNVTTMDAISTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+AL AE QK GG +DAEHA DPSY++ +GVDVE+LI+ QPD GE
Sbjct: 67 YGPESSGKTTVALSIAAEAQKKGGAVGYIDAEHALDPSYAQKIGVDVESLIISQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGAID++ VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G +K
Sbjct: 127 CLEIAEALVRSGAIDVLVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL+IR IK +GD +G R
Sbjct: 187 TNCVAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDIRRIDSIK--QGDSIIGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P++QAEF+I++ EG+S+ G +LD +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKVMKNKVAPPFRQAEFDIMYNEGISRTGNVLDVGVKEEIVQKSGAWFSYGDVRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ + YL+DNP + +IE +R+
Sbjct: 305 ENSKVYLKDNPDVALDIENQIRA 327
>gi|443289541|ref|ZP_21028635.1| Protein recA [Micromonospora lupini str. Lupac 08]
gi|385887156|emb|CCH16709.1| Protein recA [Micromonospora lupini str. Lupac 08]
Length = 348
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/320 (56%), Positives = 244/320 (76%), Gaps = 5/320 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALD A+ I+ FGKGSV RLG P+G + LD+ALG GGLP+GR+VEI
Sbjct: 6 DREKALDLALAQIDKQFGKGSVMRLGDRPVVQTAIIPTGSIALDVALGIGGLPRGRVVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y+KALGVD + ++V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVANAQRNGGIAAFIDAEHALDPEYAKALGVDTDAMLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 126 ALEIADMLIRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGVLSN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+S+K G + VG R
Sbjct: 186 TGTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDVR---RIESLKDGTDVVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAAPFKQAEFDIMYGKGISREGSLIDVGVEQAIIRKSGAWYTYDGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEK 407
++KA ++L++NP + EIEK
Sbjct: 303 KEKAREFLKENPDVAAEIEK 322
>gi|88858311|ref|ZP_01132953.1| RecA protein (Recombinase A) [Pseudoalteromonas tunicata D2]
gi|88819928|gb|EAR29741.1| RecA protein (Recombinase A) [Pseudoalteromonas tunicata D2]
Length = 353
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/325 (54%), Positives = 245/325 (75%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL AA++ I FGKGS+ +LG + +E+ +G L +D+ALG GGLP GRIVEI
Sbjct: 4 NKEKALSAALSQIERQFGKGSIMKLGDSQALDIESISTGSLGIDIALGIGGLPAGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTL L IAE QK G +DAEHA DP Y++ LGV++++L+V QPD GE
Sbjct: 64 FGPESSGKTTLTLQVIAEAQKKGKTCAFIDAEHALDPVYAEKLGVNIKDLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++GN +
Sbjct: 124 ALEICDMLVRSGAVDVVIIDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKLTGNIKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVR++IR TG +K +GDE VG
Sbjct: 184 SNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRIDIRRTGSVK--EGDEVVGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQAEF I++GEG+SK G ++D V + GAWYSY ++GQG+
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKHGELIDLGVQHKFVEKAGAWYSYQGNKVGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
++++L++NP + +EIEK +R M+
Sbjct: 302 SNSIKFLKENPAIADEIEKKLRDML 326
>gi|392946689|ref|ZP_10312331.1| protein RecA [Frankia sp. QA3]
gi|392289983|gb|EIV96007.1| protein RecA [Frankia sp. QA3]
Length = 346
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 244/327 (74%), Gaps = 5/327 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
LDR++ALD A+ I+ +FGKGSV RLG ++ P+G + LD+ALG GGLP+GR++E
Sbjct: 5 LDREKALDNALAQIDKAFGKGSVMRLGDDTRPPIQAIPTGSIALDVALGIGGLPRGRVIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHA+A Q GG A +DAEHA DP Y+ LGVD + L+V QPD GE
Sbjct: 65 IYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDGLLVSQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRKM+ +
Sbjct: 125 QALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTAALA 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG
Sbjct: 185 NSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGTEAVGN 241
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+KV+ P++ AEF+I++G G+S+ G ++D I+ + GAWY+Y +LGQ
Sbjct: 242 RTRVKVVKNKVAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQ 301
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMM 413
G++ A +LRDNP L EIEK ++ +
Sbjct: 302 GKENARSFLRDNPDLANEIEKKIKEKL 328
>gi|430376258|ref|ZP_19430661.1| recombinase A [Moraxella macacae 0408225]
gi|429541489|gb|ELA09517.1| recombinase A [Moraxella macacae 0408225]
Length = 361
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/313 (57%), Positives = 239/313 (76%), Gaps = 4/313 (1%)
Query: 102 INSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTL 159
I S+GK ++ RLG +V+ P+G L LD+ALG GGLPKGRIVEI+GPESSGKTTL
Sbjct: 27 IEKSYGKNTIMRLGDESARQVVDVIPTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTL 86
Query: 160 ALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIADRMCRS 219
L AIA+ QK GG +DAEHA DP Y+K LGVDV+NL+V QPDNGE ALEI D + RS
Sbjct: 87 TLQAIAQCQKQGGTCAFIDAEHALDPIYAKKLGVDVDNLLVTQPDNGEQALEITDMLVRS 146
Query: 220 GAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQI 279
GAID+I VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA ++ C +IF+NQ+
Sbjct: 147 GAIDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNCMVIFINQL 206
Query: 280 RYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSR 339
R KIGV +G+PE T+GG ALKF+ASVRL+IR G +K GD +G +V+V K+K++
Sbjct: 207 RMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKD--GDAIIGNETKVKVIKNKLAP 264
Query: 340 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNP 399
P+++ +F+I++GEG + LG +LD +D+V + GAWYSY D ++GQGR+KA+ +L++NP
Sbjct: 265 PFRETKFDILYGEGSNFLGEVLDIGVELDLVKKSGAWYSYNDNKIGQGRNKAIVFLQENP 324
Query: 400 LLQEEIEKVVRSM 412
+ EIE VR +
Sbjct: 325 HIAHEIETKVREI 337
>gi|91762224|ref|ZP_01264189.1| recA protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91718026|gb|EAS84676.1| recA protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 383
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 245/332 (73%), Gaps = 3/332 (0%)
Query: 80 SSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-G 138
S+ + S ++ +ALDAAM+ I +FGKGSV +LG VE+ +G L+LD+ALG G
Sbjct: 11 STKAQQSEGNEKNKALDAAMSQIIDNFGKGSVMKLGQRRAMDVESISTGSLSLDVALGIG 70
Query: 139 GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENL 198
GLPKGR++E++GPESSGKTTLAL +AE QK GG +DAEHA DP Y+K LGVD E L
Sbjct: 71 GLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEEL 130
Query: 199 IVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 258
++ QPD GE ALEIAD + +SG+I +I +DSV+ALTPRAEIEGE+G +GLQ+RLMSQA
Sbjct: 131 LISQPDTGEQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQA 190
Query: 259 LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318
LRK++G+ S +IF+NQIR KIGV +G+PE TSGG ALKF++SVR++IR G IK+
Sbjct: 191 LRKLTGSISSTNTMMIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRMDIRRIGAIKN- 249
Query: 319 KGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYS 378
GDE +G RV+V K+KV+ P+K EF++++G+G+SK+G ++D DIV + GAWY+
Sbjct: 250 -GDEIIGNSTRVKVVKNKVAPPFKVVEFDLMYGKGISKVGELVDLGAKADIVEKAGAWYA 308
Query: 379 YGDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
Y +++GQGR+ A YL NP + EIE +R
Sbjct: 309 YKGEKIGQGRENAKIYLEQNPQIAAEIEMAIR 340
>gi|1172889|sp|P42447.1|RECA_RHOCA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|558631|emb|CAA57673.1| recA [Rhodobacter capsulatus]
gi|1581748|prf||2117248A recA gene
Length = 355
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 243/324 (75%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
D+Q+AL+ A+ I FGKGS+ +LG +E +G L LD+ALG GGLPKGRIVE
Sbjct: 16 DKQKALECALAQIERQFGKGSIMKLGGDTPPPEIEATSTGSLGLDIALGIGGLPKGRIVE 75
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LH IAE QK GG VDAEHA DP Y+K LGV +E+L++ QPD GE
Sbjct: 76 IYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPYYAKKLGVSLEDLLISQPDTGE 135
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+ L+ VDSV+ALTP+AEIEG++G +G QARLMSQA+RK++ +
Sbjct: 136 QALEIVDTLVRSGAVSLVVVDSVAALTPKAEIEGDMGDATVGAQARLMSQAMRKLTASIG 195
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C +IF+NQIR KIGV +G+PE TSGG ALKF+ASVRL+IR TG IK DE +G +
Sbjct: 196 RSNCMVIFINQIRMKIGVMFGSPETTSGGNALKFYASVRLDIRRTGAIKDR--DEVIGNQ 253
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+++ EF+I++GEG+SK+G ++D +V + GAWYSYGD+R+GQG
Sbjct: 254 TRVKVVKNKVAPPFREVEFDILYGEGISKVGELVDLGVKAGVVAKSGAWYSYGDERIGQG 313
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A Q+LRDNP + EIE +R+
Sbjct: 314 RENAKQFLRDNPDIAYEIEDKIRA 337
>gi|402851912|ref|ZP_10900035.1| RecA protein [Rhodovulum sp. PH10]
gi|402497811|gb|EJW09600.1| RecA protein [Rhodovulum sp. PH10]
Length = 365
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 245/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA+ I +FGKGS+ RLG + +E +G L LD+ALG GGLP+GR+V
Sbjct: 14 MDKTKALDAALTQIERAFGKGSIMRLGKGSKPIEIEAVSTGSLGLDIALGIGGLPRGRVV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH +AE QK GG VDAEHA DP Y++ LGV++++L++ QPD G
Sbjct: 74 EIFGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNLDDLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ +DSV+AL PRAE+EGE+G Q G+QARLMSQALRK++G+
Sbjct: 134 EQALEIADTLVRSGAVDVLVIDSVAALVPRAELEGEMGDAQPGMQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ ++F+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNTMVVFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK G +LD +V + GAW+SY R+GQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGEGVSKFGEILDLGVKAGLVEKSGAWFSYDSTRIGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR+NP + +IE +R
Sbjct: 312 GRENAKTFLRNNPDVTAKIEAAIR 335
>gi|257454120|ref|ZP_05619393.1| protein RecA [Enhydrobacter aerosaccus SK60]
gi|257448448|gb|EEV23418.1| protein RecA [Enhydrobacter aerosaccus SK60]
Length = 351
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 243/324 (75%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++ +AL AA++ I FGK ++ RLG + V+ +G L LD+ALG GGLPKGRIVE
Sbjct: 4 NKAKALTAALSQIEKQFGKNTIMRLGDESAKINVDVVSTGSLGLDIALGIGGLPKGRIVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L AIA+ QK GG +DAEHA DP Y+K LGVDV+ L+V QPDNGE
Sbjct: 64 IYGPESSGKTTLTLQAIAQCQKQGGTCAFIDAEHALDPIYAKKLGVDVDALLVTQPDNGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D+I VDSV+ALTPRAEIEGE+G +GLQARLMSQALRK++GNA
Sbjct: 124 QALEITDMLVRSGAVDMIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ C ++F+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G +K G+ VG
Sbjct: 184 RSNCMVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKD--GENIVGSE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++QAEF+I++G G + LG ++D +D V + GAWYSY D ++GQG
Sbjct: 242 TRVKVIKNKLAPPFRQAEFDIMYGTGTNHLGEVVDLGVDIDAVKKSGAWYSYNDSKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
+ A+++L +NP + +EIE VR+
Sbjct: 302 KANAIRFLEENPQIAQEIEAKVRA 325
>gi|406916498|gb|EKD55510.1| hypothetical protein ACD_60C00004G0020 [uncultured bacterium]
Length = 347
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/326 (54%), Positives = 246/326 (75%), Gaps = 4/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA++ I FGKGSV RLG A +E +G L LD+ALG GGLP+GR+VE
Sbjct: 4 NKKKALGAALSQIERQFGKGSVMRLGDASSTRDIEVISTGSLALDIALGVGGLPRGRVVE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L IA Q+ GG A VDAEHA DP+Y+K LGV+V+ L++ QPD GE
Sbjct: 64 IYGPESSGKTTLTLQVIAACQRQGGTAAFVDAEHALDPAYAKRLGVNVDELLISQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RS A+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++ N
Sbjct: 124 QALEITDMLVRSSAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG +K+ GDE VG
Sbjct: 184 RSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSVKN--GDEVVGSE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++QAEF+I++ EG+S+ G +++ + ++V + GAW+SY +QR+GQG
Sbjct: 242 TRVKVVKNKVAPPFRQAEFDILYNEGISREGEIIELGVLHNLVDKAGAWFSYKNQRIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMM 413
+D A +L+++ + EEIEK +R +
Sbjct: 302 KDNARIFLKEHKEIAEEIEKQIREKL 327
>gi|348171421|ref|ZP_08878315.1| DNA recombination/repair [Saccharopolyspora spinosa NRRL 18395]
Length = 346
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/331 (54%), Positives = 249/331 (75%), Gaps = 5/331 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL+ A+ I+ +GKGSV RLG A +E P+G ++LD+ALG GGLP+GRIVEI
Sbjct: 6 DKGKALELALAQIDKQYGKGSVMRLGDESRAPIEVIPTGSISLDVALGIGGLPRGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKT++ALHA+A QKLGG A +DAEHA DP Y+KA+GVD + L+V QPD GE
Sbjct: 66 YGPESSGKTSVALHAVANAQKLGGTAAFIDAEHALDPEYAKAIGVDTDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++
Sbjct: 126 ALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTSALYN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
A T IF+NQ+R K+GV +G+PE T+GG ALKF++SVRL++R +I+++K G + VG R
Sbjct: 186 AKTTAIFINQLREKVGVMFGSPETTTGGKALKFYSSVRLDVR---RIETLKDGSDAVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+II+G G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDIIYGVGISREGSLIDMGVEQSIIRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
++ A +++R+NP + EIEK ++ + G+
Sbjct: 303 KENARKFMRENPDIANEIEKRIKEKLGIGAT 333
>gi|148273206|ref|YP_001222767.1| recombinase A [Clavibacter michiganensis subsp. michiganensis NCPPB
382]
gi|166220639|sp|A5CSL7.1|RECA_CLAM3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|147831136|emb|CAN02088.1| recombinase A [Clavibacter michiganensis subsp. michiganensis NCPPB
382]
Length = 362
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 248/323 (76%), Gaps = 5/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+++L+ A+ I+ FGKGSV RLGS A V P+G + LD+ALG GGLP+GRIVEI
Sbjct: 6 DREKSLETALAQIDRQFGKGSVMRLGSDERAPVAVIPTGSVALDVALGIGGLPRGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHAIA Q+ GG A +DAEHA DP Y+K LGVD++ L+V QPD GE
Sbjct: 66 YGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPEYAKKLGVDIDALLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG+IDL+ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G ++
Sbjct: 126 ALEIADMLVRSGSIDLVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGGLNQ 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
T+IF+NQ+R KIGV++G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 186 TQTTMIFINQLREKIGVFFGSPETTAGGKALKFYASVRLDIR---RIETLKDGTDAVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++G G+S+ G ++D +IV + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKMAPPFKQAEFDILYGTGISREGSLIDFGVEHEIVRKSGAWYTYDGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
++ + ++L +NP + EIE+ ++
Sbjct: 303 KENSRKHLLNNPEIAAEIEQKIK 325
>gi|75675472|ref|YP_317893.1| recombinase A [Nitrobacter winogradskyi Nb-255]
gi|123745720|sp|Q3ST50.1|RECA_NITWN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|74420342|gb|ABA04541.1| RecA protein [Nitrobacter winogradskyi Nb-255]
Length = 362
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV +LG ++ VE SG L LD+ALG GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
E++GPESSGKTTLALHA+AE QK GG +DAEHA DP Y++ LGV+V++L++ QPD+G
Sbjct: 74 EVYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ +DSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 NKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEG+SK+G +LD IV + GAW+SY QR+GQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSYDSQRMGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR NP + ++E +R
Sbjct: 312 GRENAKAFLRANPDITAKVEMAIR 335
>gi|402832783|ref|ZP_10881412.1| RecA protein [Selenomonas sp. CM52]
gi|402282266|gb|EJU30824.1| RecA protein [Selenomonas sp. CM52]
Length = 361
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/327 (54%), Positives = 247/327 (75%), Gaps = 4/327 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+DR+ AL A+ I FGKGS+ RLG A + VET P+G L LD+ALG GGLP+GRIV
Sbjct: 1 MDREEALANALKHIEKEFGKGSIMRLGEASANMNVETIPTGILPLDVALGVGGLPRGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
E++GPESSGKTT+ LH IAE QK GG A +DAEHA DP Y+K LGV+++ L++ QPD G
Sbjct: 61 EVYGPESSGKTTVTLHMIAEAQKNGGIAAFIDAEHALDPVYAKKLGVNIDELLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E AL+I D + RSGAID+I VDSV+AL P+AEI+G++G Q +G+ ARLMS+A+RK++G
Sbjct: 121 EQALDIVDALVRSGAIDIIVVDSVAALVPKAEIDGDMGDQVVGMHARLMSRAMRKLTGFI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ +F+NQIR K+GV +G+PE T+GG ALKF+++VRL++R T KI ++G E +G
Sbjct: 181 SKSRTVAVFINQIREKVGVMFGSPETTTGGRALKFYSTVRLDVRKTDKI--MQGQEMIGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R +VRV K+KV+ P+K AEF+I++GEGVS++G +LD A DI+ + G+WYSY RLGQ
Sbjct: 239 RTKVRVVKNKVAPPFKTAEFDIMYGEGVSRVGTVLDIATDFDIIEKSGSWYSYDGSRLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMM 413
G++ A + L++ P L EIE+ VR+ +
Sbjct: 299 GKENAKKALKEKPELAAEIEEKVRAKL 325
>gi|167630439|ref|YP_001680938.1| reca protein [Heliobacterium modesticaldum Ice1]
gi|238687993|sp|B0TII6.1|RECA_HELMI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|167593179|gb|ABZ84927.1| reca protein [Heliobacterium modesticaldum Ice1]
Length = 346
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 248/330 (75%), Gaps = 8/330 (2%)
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGL 140
+GD++ +AL A+N I +FGKGS+ RLG A L VE P+G + LD+ALG GG+
Sbjct: 3 AGDNKL----QALQQALNSIEKAFGKGSIMRLGEASAKLLVEVIPTGSIALDMALGIGGV 58
Query: 141 PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIV 200
P+GRIVE++GPESSGKTT+ALH IAE QK+GG A +DAEHA DP Y++ LGVD++NL+V
Sbjct: 59 PRGRIVEVYGPESSGKTTVALHIIAEAQKMGGMAAFIDAEHALDPVYARNLGVDIDNLLV 118
Query: 201 CQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 260
QPD GE ALEI + + RSGAID++ +DSV+AL P+AEI+GE+G +GLQARLMSQALR
Sbjct: 119 SQPDTGEQALEICEALVRSGAIDVVVIDSVAALVPKAEIDGEMGDAHVGLQARLMSQALR 178
Query: 261 KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 320
K++G SK+ +F+NQIR K+GV +GNPE T GG ALKF++SVRLE+R +K +G
Sbjct: 179 KLTGVVSKSKTCCLFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRKVDTLK--QG 236
Query: 321 DEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYG 380
+ +G R RV+V K+KV+ P+K A+F+I++GEG+S+ G ++D A M IV + GAWYSY
Sbjct: 237 SDMIGSRTRVKVVKNKVAPPFKVADFDIMYGEGISREGSLVDLAVDMGIVEKSGAWYSYK 296
Query: 381 DQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
RLGQGR+ ++LR++P L EIE ++R
Sbjct: 297 GDRLGQGRENVKEFLRNHPALAAEIESMIR 326
>gi|325954957|ref|YP_004238617.1| protein recA [Weeksella virosa DSM 16922]
gi|323437575|gb|ADX68039.1| Protein recA [Weeksella virosa DSM 16922]
Length = 332
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/322 (58%), Positives = 251/322 (77%), Gaps = 4/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL ++ ++ ++GKG+V R+G SA +E PSG L LD+ALG GG P+GR++E
Sbjct: 6 NKKKALQLVLDKMDKAYGKGTVMRMGDSAIDDKIEVIPSGSLGLDIALGVGGYPRGRVIE 65
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGV++E LIV QPDNGE
Sbjct: 66 IYGPESSGKTTLTLHAIAEAQKQGGIAAFIDAEHAFDRYYAEKLGVNIEELIVSQPDNGE 125
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGAID+I +DSV+ALTP+AEIEGE+G ++GLQARLMSQALRK++ +
Sbjct: 126 QALEIADNLIRSGAIDIIVIDSVAALTPKAEIEGEMGDSRMGLQARLMSQALRKLTATIN 185
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K CT IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK+ GDE +G
Sbjct: 186 KTKCTAIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKN--GDEVIGNH 243
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
+V+V K+KV+ P++QAEF+I++GEG+SK+G +LD A IV + G+WYSY + +LGQG
Sbjct: 244 TKVKVVKNKVAPPFRQAEFDIMYGEGISKVGEILDLAVEKGIVQKSGSWYSYNESKLGQG 303
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
RD + LRDNP L EEIE+ +
Sbjct: 304 RDAVKEVLRDNPELSEEIEEKI 325
>gi|332289091|ref|YP_004419943.1| recombinase A [Gallibacterium anatis UMN179]
gi|330431987|gb|AEC17046.1| recombinase A [Gallibacterium anatis UMN179]
Length = 355
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 240/322 (74%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D++RAL AA+ I FGKGS+ RLG VE +G L LD+ALG GGLP GRIVEI
Sbjct: 7 DKERALAAALGQIEKQFGKGSIMRLGDTQTLDVEAVSTGSLALDVALGIGGLPMGRIVEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTL L IA+ QK G +DAEHA DP Y+ LGVDV++L+V QPDNGE
Sbjct: 67 FGPESSGKTTLTLSVIAQAQKEGKTCAFIDAEHALDPIYASKLGVDVQSLLVSQPDNGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D+I +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++G+
Sbjct: 127 ALEICDALVRSGAVDVIIIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGHIKT 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
A C ++F+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG I GDE +G
Sbjct: 187 ANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSI--TDGDEVIGNET 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P++QAEF+I++GEG+SK G +++ ++ + GAWYSY D+++GQGR
Sbjct: 245 RVKVVKNKVAAPFRQAEFQILYGEGISKNGELIELGVKHKLLNKSGAWYSYNDEKIGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
A+++L ++P + E+E+ +R
Sbjct: 305 TNAMKWLAEHPEVAAELERKLR 326
>gi|406980815|gb|EKE02373.1| hypothetical protein ACD_20C00395G0003 [uncultured bacterium]
Length = 355
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 252/331 (76%), Gaps = 5/331 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+AL+ A++ I FGKGS+ RLG VE+ P+G L+LDLALG GG+P+GRIVEI
Sbjct: 18 DRQKALEIALDKIEKDFGKGSIMRLGDKASVAVESIPTGALSLDLALGIGGVPRGRIVEI 77
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH +AE QK GG A VDAEHA DP YS+ LGV V+ L+V QPD GE
Sbjct: 78 YGPESSGKTTLALHILAEAQKKGGIAAFVDAEHALDPEYSRKLGVKVDELLVSQPDTGEQ 137
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
AL+I + + RSGA+D+I +DSV+AL PRAEI+GE+G +GLQARLMSQALRK++ K
Sbjct: 138 ALDITEELVRSGAVDVIVIDSVAALVPRAEIDGEMGDSHMGLQARLMSQALRKLTAVVGK 197
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD-EDVGVR 327
T+IF+NQ+R KIG+ YGNPE T+GG ALK++AS+RL+IR +I+++K D ++ G R
Sbjct: 198 TKTTVIFINQLRSKIGIVYGNPETTTGGNALKYYASLRLDIR---RIETLKKDGQEYGNR 254
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
+V+V K+KV+ P++ AEF+II+GEG+SK+GC++D A +I+ + G W++YGD + GQG
Sbjct: 255 AKVKVVKNKVAPPFRIAEFDIIYGEGISKIGCIIDVAVATNIINKSGTWFNYGDIKFGQG 314
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
++K YL +NP L +EI+ VR +S+ +V
Sbjct: 315 KEKVKDYLMENPKLLDEIDAKVRQNLSEMTV 345
>gi|383811902|ref|ZP_09967350.1| RecA protein [Prevotella sp. oral taxon 306 str. F0472]
gi|383355498|gb|EID33034.1| RecA protein [Prevotella sp. oral taxon 306 str. F0472]
Length = 334
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/324 (55%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL AAM+ I FGKGS+ R+G V+ P+G + LD ALG GG P+GRI+EI+GP
Sbjct: 10 KALQAAMSKIEKDFGKGSIMRMGDEQIENVDVIPTGSVALDTALGVGGYPRGRIIEIYGP 69
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTLA+HAIAE QK GG A +DAEHAFD Y++ LGVDV+NL + QPDNGE ALE
Sbjct: 70 ESSGKTTLAIHAIAEAQKQGGIAAFIDAEHAFDRFYAEKLGVDVDNLWISQPDNGEQALE 129
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD++ RS AID++ VDSV+ALTP+ EIEG++G +GLQARLMSQALRK++ SK
Sbjct: 130 IADQLIRSSAIDILVVDSVAALTPKKEIEGDMGDSAVGLQARLMSQALRKLTSTISKTNT 189
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
IF+NQ+R KIGV +GNPE T+GG ALKF++SVRL+IR IK+ GD+ +G +VRV+
Sbjct: 190 CCIFINQLREKIGVMFGNPETTTGGNALKFYSSVRLDIRRVTSIKN--GDQVIGNQVRVK 247
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
+ K+KV+ P+++AEFEI FGEG+SK+G ++D +I+ + G+W+SY +L QGRD
Sbjct: 248 IVKNKVAPPFRKAEFEITFGEGISKIGEIVDLGVQYNIIQKSGSWFSYNGTKLAQGRDAT 307
Query: 392 LQYLRDNPLLQEEIEKVVRSMMSD 415
L+DNP L EEIE +++ + D
Sbjct: 308 KTMLKDNPELAEEIEGLIKQAIVD 331
>gi|357030598|ref|ZP_09092542.1| recombinase A [Gluconobacter morbifer G707]
gi|356415292|gb|EHH68935.1| recombinase A [Gluconobacter morbifer G707]
Length = 345
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/324 (54%), Positives = 246/324 (75%), Gaps = 3/324 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGS+ R+G + +G L LD+ALG GG+P+GRIVE
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRMGQRPKEQADVISTGSLGLDIALGIGGMPRGRIVE 60
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV++++L++ QPD GE
Sbjct: 61 IYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDDLLLSQPDAGE 120
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G +
Sbjct: 121 QALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVA 180
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IFLNQIR KIGV +GNPE T+GG ALKF++S+RL+IR G IK DE VG +
Sbjct: 181 RSNTLVIFLNQIRMKIGVMFGNPETTTGGNALKFYSSIRLDIRRIGSIKD--KDEVVGNQ 238
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G +LD +IV + GAW+S+ QR+GQG
Sbjct: 239 TRVKVVKNKMAPPFRQVEFDIMYGEGISKMGELLDLGVKGNIVEKSGAWFSFDSQRIGQG 298
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A Q+LR++P + EIE+ +RS
Sbjct: 299 RENAKQFLREHPEMANEIERRIRS 322
>gi|399023940|ref|ZP_10725989.1| protein RecA [Chryseobacterium sp. CF314]
gi|398081668|gb|EJL72441.1| protein RecA [Chryseobacterium sp. CF314]
Length = 333
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/333 (56%), Positives = 256/333 (76%), Gaps = 5/333 (1%)
Query: 86 SRFLDRQRALDAAMNDINSSFGKGSVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKG 143
S D+++AL ++ ++ ++GKG+V LG S+ +E PSG L LD+ALG GG P+G
Sbjct: 2 SNIDDKKKALALVLDKLDKTYGKGTVMTLGDSSVDNTIEVIPSGSLGLDIALGVGGYPRG 61
Query: 144 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQP 203
RI+EI+GPESSGKTTL LHAIAE QK GG A +DAEHAFD +Y+ LG+D+ENLI+ QP
Sbjct: 62 RIIEIYGPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRTYAAKLGIDLENLIISQP 121
Query: 204 DNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 263
DNGE ALEIAD + RSGAID++ +DSV+ALTP+AEIEGE+G ++GL ARLMSQALRK++
Sbjct: 122 DNGEQALEIADNLIRSGAIDIVVIDSVAALTPKAEIEGEMGDSKMGLHARLMSQALRKLT 181
Query: 264 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIR-STGKIKSVKGDE 322
S+ CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVR++IR ++ IK+ GDE
Sbjct: 182 ATISRTKCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRVDIRKASAPIKN--GDE 239
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG RV+V++ K+KV+ P+KQAEF+I++GEGVSK G +LD A + IV + G+W+SY +
Sbjct: 240 AVGSRVKVKIVKNKVAPPFKQAEFDIMYGEGVSKTGEILDQAVELGIVKKSGSWFSYEET 299
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSD 415
+LGQGRD L+DNP L EE+E ++ ++ +
Sbjct: 300 KLGQGRDAVKDVLKDNPELSEELENKIKEVLKN 332
>gi|386867274|ref|YP_006280268.1| recombinase A [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|385701357|gb|AFI63305.1| recombinase A [Bifidobacterium animalis subsp. animalis ATCC 25527]
Length = 382
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/322 (55%), Positives = 244/322 (75%), Gaps = 5/322 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R+ AL++A+ + FGKGS RLG +E P+G L LD ALG GGLP+GRIVEI+
Sbjct: 24 REDALNSALAQVEKQFGKGSAMRLGDRPEQDIEVIPTGSLALDTALGIGGLPRGRIVEIY 83
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP Y++ LGVD ++LIV QPDNGE A
Sbjct: 84 GPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDTDSLIVSQPDNGEQA 143
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEG++G +GLQARLMSQALRKM+G ++A
Sbjct: 144 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALAQA 203
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG-DEDVGVRV 328
T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR +I+++K DE +G R
Sbjct: 204 NTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRMDIR---RIQTLKDKDEPIGNRT 260
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+K AEF++++G+G+S+ G +LD A D+V + G+W++Y ++LGQGR
Sbjct: 261 RVKVVKNKMAPPFKTAEFDMLYGQGISQEGSILDMALETDVVRKSGSWFTYNGEQLGQGR 320
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ ++L DNP L EEI V+
Sbjct: 321 ENVRKFLIDNPKLAEEISTQVK 342
>gi|311744185|ref|ZP_07717990.1| recombination protein A [Aeromicrobium marinum DSM 15272]
gi|311312540|gb|EFQ82452.1| recombination protein A [Aeromicrobium marinum DSM 15272]
Length = 361
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 250/329 (75%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R +A+D A+ I+ + GKG+V RLG G ++ P+G LD+ALG GGLP+GR+VEI
Sbjct: 20 ERTKAIDNAIAQIDRAHGKGAVMRLGERGRTKIDVIPTGATALDVALGIGGLPRGRVVEI 79
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y++ALGVD + L++ QPD+GE
Sbjct: 80 YGPESSGKTTVALHAVANAQKSGGVAAFIDAEHALDPEYARALGVDTDALLISQPDSGEQ 139
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEI+GE+G +GLQARLMSQALRKM+G +
Sbjct: 140 ALEIADMLIRSGALDIIVIDSVAALVPRAEIDGEMGDSHVGLQARLMSQALRKMTGAING 199
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G + VG R
Sbjct: 200 SGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGTDMVGNR 256
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+I++G+G+S+ G ++D +V + GAWY+Y +LGQG
Sbjct: 257 TRVKVVKNKLAPPFKQAEFDIMYGKGISREGSLIDVGVDCGLVRKAGAWYTYEGDQLGQG 316
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A Q+L DNP L EE+EK ++ M G
Sbjct: 317 KENARQFLHDNPDLAEELEKRIKDQMGVG 345
>gi|403713499|ref|ZP_10939599.1| protein RecA [Kineosphaera limosa NBRC 100340]
gi|403212263|dbj|GAB94282.1| protein RecA [Kineosphaera limosa NBRC 100340]
Length = 369
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 246/332 (74%), Gaps = 5/332 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+Q +L+ M I +FGKG+V RLG +E P+G + LD+ALG GGLP+GR+VEI+
Sbjct: 7 KQNSLNTVMAQIEKNFGKGAVMRLGDDVRPPIEVIPTGAIALDVALGIGGLPRGRVVEIY 66
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y+K LGVD + L+V QPD GE A
Sbjct: 67 GPESSGKTTVALHAVASAQKAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQA 126
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G + +
Sbjct: 127 LEIADMLIRSGALDIIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGALNSS 186
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVRV 328
G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+++K G E VG R
Sbjct: 187 GTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVR---RIETLKDGSEPVGNRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KVS P+KQAEF+II+G+G+S+ G ++D V + G+WY+Y +LGQG+
Sbjct: 244 RVKVVKNKVSPPFKQAEFDIIYGQGISREGGLIDMGVDQGFVKKSGSWYTYEGDQLGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQ 420
+ A +LRDNP L +E+E +++ + G Q
Sbjct: 304 ENARSFLRDNPGLADELEIKIKAKLGVGRAAQ 335
>gi|427390254|ref|ZP_18884660.1| protein recA [Actinobaculum massiliae ACS-171-V-Col2]
gi|425733269|gb|EKU96075.1| protein recA [Actinobaculum massiliae ACS-171-V-Col2]
Length = 382
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 251/326 (76%), Gaps = 6/326 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R++A+++A+ I+ FGKGSV RLG VE P+G + LD+ALG GGLP+GR+VE+
Sbjct: 12 NREKAIESALEQIDKQFGKGSVMRLGDQPARRVEVIPTGSVALDIALGIGGLPRGRVVEV 71
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y++ LGV+ + LIV QPD GE
Sbjct: 72 YGPESSGKTTVALHAVASAQRNGGIAAFIDAEHALDPEYARNLGVNTDELIVSQPDTGEQ 131
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ +DSV+AL P+AEIEG++G +GLQARLMSQALRK++G S
Sbjct: 132 ALEIMDMLIRSGALDIVVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKITGALSA 191
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+G T IF+NQ+R KIGV++GNPE T+GG ALKF++SVRL++R +I+++K G VG R
Sbjct: 192 SGTTAIFINQLREKIGVFFGNPETTTGGKALKFYSSVRLDVR---RIETLKDGGTPVGNR 248
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P+KQAEF+II+GEG+S+ G +LD IV + GAW++Y +LGQG
Sbjct: 249 TRVKVVKNKMAPPFKQAEFDIIYGEGISREGGILDMGVDEGIVRKSGAWFTYEGDQLGQG 308
Query: 388 RDKALQYLRDNPLLQEEIE-KVVRSM 412
++KA Q+L+DNP L EEIE K++R +
Sbjct: 309 KEKARQFLKDNPDLCEEIEDKILRKV 334
>gi|153855273|ref|ZP_01996439.1| hypothetical protein DORLON_02453 [Dorea longicatena DSM 13814]
gi|149752272|gb|EDM62203.1| RecA protein [Dorea longicatena DSM 13814]
Length = 353
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/330 (54%), Positives = 250/330 (75%), Gaps = 4/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D++RALDAA+ + FGKG+V RLG + VET P+G L+LDLALG GG+PKGRIVE
Sbjct: 5 DKKRALDAAIAKLEKDFGKGTVMRLGDPSAQVAVETIPTGSLSLDLALGLGGVPKGRIVE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH IAEVQK GG A +DAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 65 IYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDELYISQPDSGD 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D+I VDSV+AL P+ EIEG++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEITETMVRSGAMDIIVVDSVAALVPKQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF++SVR+++R +K + E VG R
Sbjct: 185 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRMDVRRIETLK--QSGEMVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV++ K+K++ P+K+AEF+I+FG+G+SK G +LD A D+V + GAW++Y ++GQG
Sbjct: 243 TRVKIVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAVKCDLVSKSGAWFAYNGDKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
R+ A YL ++P + EE+E+ +R+ G+
Sbjct: 303 RENAKTYLSEHPEIMEELEQKIRAHYHIGA 332
>gi|404329074|ref|ZP_10969522.1| recombinase A [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 354
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R+ ALD+A+ I FGKGS+ RLG V T SG L LD+ALG GG P+GRI+EI
Sbjct: 6 ERKAALDSALRQIEKQFGKGSIMRLGEQPDQRVSTVSSGSLALDIALGVGGYPRGRIIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 66 YGPESSGKTTVALHAIAEVQNAGGQAAFIDAEHALDPVYAQNLGVNIDELLLSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 126 ALEIVEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGVISK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR K+GV +GNPEVT GG ALKF++SVRLE+R +K G++ VG R
Sbjct: 186 SKTVAIFINQIREKVGVMFGNPEVTPGGRALKFYSSVRLEVRRAETLKM--GNDIVGNRA 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAE +I++G+G+S G +LD +DIV + G+WYSY +RLGQGR
Sbjct: 244 RIKVVKNKVAPPFKQAEVDIMYGKGISSEGEILDIGSDLDIVEKSGSWYSYNKERLGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A +L++N ++E+I+K +R+
Sbjct: 304 ENAKLFLQENEPVKEKIKKAIRT 326
>gi|418469400|ref|ZP_13039984.1| RecA protein [Streptomyces coelicoflavus ZG0656]
gi|371549996|gb|EHN77559.1| RecA protein [Streptomyces coelicoflavus ZG0656]
Length = 374
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIEKKIKEKLGVG 330
>gi|47678132|emb|CAF21829.1| RecA recombinase [Enterococcus cecorum DSM 20682 = ATCC 43198]
Length = 348
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/322 (55%), Positives = 242/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKGS+ +LG + T PSG L LD+ALG GG P+GRI+E+
Sbjct: 4 DRKTALDAALKKIEKNFGKGSIMKLGEKADQQISTVPSGSLALDVALGVGGYPRGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP+Y+K LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKQGGTAAFIDAEHALDPAYAKKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D+I +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG +K
Sbjct: 124 GLEIADALVSSGAVDIIVIDSVAALVPRAEIDGEMGDTHVGLQARLMSQALRKLSGTINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE T GG ALKF+A+VRLE+R + ++K +G + VG R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRSEQLK--QGSDIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+S+ G +LD A +D+V + GAWYSY +R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEIDIMYGEGISQEGELLDMAVDVDLVDKSGAWYSYNGERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ Y++D+P + E+ VR
Sbjct: 302 ENVKNYMKDHPEMVSELLVKVR 323
>gi|78173105|gb|ABB29469.1| RecA [Streptomyces argillaceus]
Length = 376
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 245/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR++E+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRSKEPIEVIPTGSTALDVALGVGGLPRGRVIEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+ GG VDAEHA DP Y++ LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYAQKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIE+ ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIERKIKEKLGVG 330
>gi|85703237|ref|ZP_01034341.1| recombinase A [Roseovarius sp. 217]
gi|85672165|gb|EAQ27022.1| recombinase A [Roseovarius sp. 217]
Length = 357
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 244/329 (74%), Gaps = 4/329 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
+ R D+Q+ALD+A+ I FGKGS+ +LG +E+ +G L LD+ALG GG+PK
Sbjct: 11 NKRNADKQKALDSALAQIERQFGKGSIMKLGGENPIKDIESTSTGSLGLDIALGIGGIPK 70
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVE++GPESSGKTTL LH +AE QK GG VDAEHA DP Y++ LGVD++ L++ Q
Sbjct: 71 GRIVEVYGPESSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPIYARKLGVDLDELLISQ 130
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEI D + RSGA+ +I VDSV+ALTP++E+EGE+G +G+ ARLMSQA+RK+
Sbjct: 131 PDTGEQALEIVDTLVRSGAVSMIVVDSVAALTPKSELEGEMGDSSVGVHARLMSQAMRKL 190
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G+ S+ CT+IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G +K DE
Sbjct: 191 TGSISRTNCTVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAVKDR--DE 248
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG RV+V K+KV+ P+KQ EF+I++GEG+SK G ++D +V + G+WYSYGD+
Sbjct: 249 IVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKTGELVDMGVKAGVVEKSGSWYSYGDE 308
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
R+GQGR+ A YLRDNP EIE +R+
Sbjct: 309 RIGQGRENAKTYLRDNPATALEIEDKIRA 337
>gi|262273677|ref|ZP_06051490.1| RecA protein [Grimontia hollisae CIP 101886]
gi|262222092|gb|EEY73404.1| RecA protein [Grimontia hollisae CIP 101886]
Length = 347
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/345 (52%), Positives = 249/345 (72%), Gaps = 4/345 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q+AL AA+ I FGKGS+ RLG +ET +G L+LD+ALG GGLP GRIVEI
Sbjct: 4 NKQKALAAALGQIEKQFGKGSIMRLGDDRTMDIETVSTGSLSLDIALGAGGLPYGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IAE QK G +DAEHA DP Y++ L VD++NL+V QPD GE
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKQGKTCAFIDAEHALDPIYARKLNVDIDNLLVSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+ALTP+AEIEGE+G +GLQAR++SQA+RK++ N
Sbjct: 124 ALEIADALTRSGAVDVIIIDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTANIKN 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK +GDE VG
Sbjct: 184 SNTLMIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIK--EGDEVVGNDT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++GEG++ G ++D +V + GAWYSY +++GQG+
Sbjct: 242 RVKVVKNKIAAPFKQAEFQILYGEGINLYGELIDLGVKHKLVEKAGAWYSYNGEKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQE 433
A ++L++NP + +E++K +R M+ Q ++ LP +E
Sbjct: 302 ANACKFLKENPEIAKELDKTLRDMLLQNGQPQAEN-KDAELPEEE 345
>gi|50122291|ref|YP_051458.1| recombinase A [Pectobacterium atrosepticum SCRI1043]
gi|59798238|sp|Q6D1S8.1|RECA_ERWCT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49612817|emb|CAG76267.1| RecA protein (recombinase A) [Pectobacterium atrosepticum SCRI1043]
Length = 357
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/346 (53%), Positives = 249/346 (71%), Gaps = 7/346 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q+AL AA+ I FGKGS+ RLG VET +G L+LD+ALG GGLP GRIVEI
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IA Q+ G +DAEHA DP Y+K LGVD++NL+ QPD GE
Sbjct: 66 YGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D+I VDSV+ALTP+AEIEGEIG +GL AR+MSQA+RK++GN +
Sbjct: 126 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
A LIF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR TG IK +G+E VG
Sbjct: 186 ANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIK--EGEEVVGSET 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++GEG++ G ++D ++ + GAWYSY ++GQG+
Sbjct: 244 RVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
A +L++NP + E++K +R M+ +H+G+ L+ + N +
Sbjct: 304 ANACNFLKENPTISAELDKKLREML----LHKGNELKPAAAGNSHD 345
>gi|313206274|ref|YP_004045451.1| reca protein [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|383485582|ref|YP_005394494.1| reca protein [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|386321741|ref|YP_006017903.1| RecA1 [Riemerella anatipestifer RA-GD]
gi|416110630|ref|ZP_11592174.1| RecA protein [Riemerella anatipestifer RA-YM]
gi|442314537|ref|YP_007355840.1| RecA/RadA recombinase [Riemerella anatipestifer RA-CH-2]
gi|312445590|gb|ADQ81945.1| recA protein [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|315023044|gb|EFT36057.1| RecA protein [Riemerella anatipestifer RA-YM]
gi|325336284|gb|ADZ12558.1| RecA1 [Riemerella anatipestifer RA-GD]
gi|380460267|gb|AFD55951.1| reca protein [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|441483460|gb|AGC40146.1| RecA/RadA recombinase [Riemerella anatipestifer RA-CH-2]
Length = 343
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/332 (56%), Positives = 254/332 (76%), Gaps = 11/332 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL---VETFPSGCLTLDLALG-GGLPKGRI 145
D+++AL A + ++ ++GKG+V +LG G + +E PSG L LDLALG GG PKGRI
Sbjct: 12 DKKKALAAVLEKLDKTYGKGTVMKLGD--GTVDHNIEVIPSGSLGLDLALGVGGYPKGRI 69
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
VEI+GPESSGKTTL LHAIAE QK+GG A +DAEHAFD Y++ LG+++E LIV QPDN
Sbjct: 70 VEIYGPESSGKTTLTLHAIAEAQKVGGTAAFIDAEHAFDMHYAEKLGINLEELIVSQPDN 129
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIAD + RSG +D++ VDSV+ALTP+AEI+G++G ++GL ARLMSQALRK++ +
Sbjct: 130 GEQALEIADSLIRSGGVDIVVVDSVAALTPKAEIDGDMGDSKMGLHARLMSQALRKLTSS 189
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIR----STGKIKSVKGD 321
SK CT+IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR TGKIK G
Sbjct: 190 ISKTKCTVIFINQLRDKIGVMFGSPETTTGGNALKFYASVRIDIRRSLSDTGKIKDKSG- 248
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E +G R +V+V K+KV+ P+K AEF+I++GEGVSK+G +LD A +DI+ + G+W+SY D
Sbjct: 249 EVIGNRTKVKVVKNKVAPPFKSAEFDIMYGEGVSKVGEILDVATDLDIIQKSGSWFSYQD 308
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRSMM 413
+LGQGRD + ++DNP L EE+E +R +
Sbjct: 309 TKLGQGRDTVKELIKDNPELAEELEAKIREKL 340
>gi|126652531|ref|ZP_01724696.1| RecA [Bacillus sp. B14905]
gi|126590659|gb|EAZ84775.1| RecA [Bacillus sp. B14905]
Length = 353
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/323 (55%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I +FGKGS+ +LG + T SG L LD ALG GG P+GRI+E+
Sbjct: 3 DRKAALEQALKQIEKNFGKGSIMKLGEKTDLEIATSSSGSLALDAALGVGGYPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQARGGQAAFIDAEHALDPIYAQKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAID+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK+SG+ +K
Sbjct: 123 ALEIAEALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGSINK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR KIGV +GNPE T GG ALKF++SVRLE+R IK +G++ VG R
Sbjct: 183 SKTIAIFINQIREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAEAIK--QGNDIVGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
++++ K+KV+ P++ AE +I++GEG+SK G +D +DIV + G+WY+YGD+RLGQGR
Sbjct: 241 KIKIVKNKVAPPFRTAEVDIMYGEGISKEGETVDLGVELDIVQKSGSWYAYGDERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A QYL++N + EEI +RS
Sbjct: 301 ENAKQYLKENTAVLEEISNKIRS 323
>gi|423712844|ref|ZP_17687142.1| protein recA [Bartonella washoensis Sb944nv]
gi|395410540|gb|EJF77094.1| protein recA [Bartonella washoensis Sb944nv]
Length = 347
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/310 (59%), Positives = 239/310 (77%), Gaps = 4/310 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I SFGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRI+
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALHAIAE QK GG +DAEHA DP Y++ LGVD+ENL + QPD G
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ VDSV+ALTPRAEI+GE+G GLQARLMS+ALRK++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTSAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
++ C ++F+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK D VG
Sbjct: 181 FRSNCMVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKD--RDAIVGN 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+II+GEG+SK+G ++D + IV + GAW+SY QRLGQ
Sbjct: 239 QTRVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQ 298
Query: 387 GRDKALQYLR 396
GR+ A Q+LR
Sbjct: 299 GRENAKQFLR 308
>gi|386774383|ref|ZP_10096761.1| recombination protein RecA [Brachybacterium paraconglomeratum LC44]
Length = 372
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 244/325 (75%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +LD A+ I+ FGKGS+ RLG VE P+G + LD ALG GGLP+GRIVEI
Sbjct: 14 DRGSSLDNALAQIDRQFGKGSIMRLGDDTRPPVEVIPTGSVALDAALGVGGLPRGRIVEI 73
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 74 YGPESSGKTTVALHAVANAQRNGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 133
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 134 ALEITDMLIRSGALDIVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSS 193
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR +KS G + VG R
Sbjct: 194 SGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRMDIRRIETLKS--GSDAVGNRT 251
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++GEG+S+ G ++D +V + GAW++Y +LGQG+
Sbjct: 252 RVKVVKNKMAPPFKQAEFDILYGEGISREGGLIDLGVEHGVVRKSGAWFTYEGDQLGQGK 311
Query: 389 DKALQYLRDNPLLQEEI-EKVVRSM 412
+ + Q+L+DNP L EI EK++R++
Sbjct: 312 ENSRQFLKDNPDLAAEIEEKILRTL 336
>gi|153954070|ref|YP_001394835.1| recombinase A [Clostridium kluyveri DSM 555]
gi|219854683|ref|YP_002471805.1| hypothetical protein CKR_1340 [Clostridium kluyveri NBRC 12016]
gi|146346951|gb|EDK33487.1| RecA [Clostridium kluyveri DSM 555]
gi|219568407|dbj|BAH06391.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 363
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/322 (55%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A+++AM I FGKG++ +LG V+ +GCL LD+ALG GG+P+GR++EI
Sbjct: 7 EKLQAIESAMLQIEKQFGKGAIMKLGENSILNVDVVSTGCLDLDIALGIGGVPRGRVIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALH IAE QK GG A +DAEHA DPSY+K LGVD+ENLIV QPD GE
Sbjct: 67 FGPESSGKTTVALHIIAEAQKTGGAAAFIDAEHALDPSYAKNLGVDIENLIVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RS AID++ VDSV+AL P+AEIEGE+G +GLQARLMSQALRK++ + +K
Sbjct: 127 ALEIAEALVRSNAIDVLVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTSSINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C IF+NQ+R K+G+ +GNPEVT GG ALKF++SVR+++R IK +GD VG R
Sbjct: 187 SKCVTIFINQLREKVGIMFGNPEVTPGGRALKFYSSVRMDVRRIDSIK--QGDTMVGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P+KQAEF+I++ +G+S+ G +LD D V + GAW+SY + RLGQGR
Sbjct: 245 KVKVIKNKVAPPFKQAEFDIMYNQGISREGNVLDVGVREDFVQKSGAWFSYKEIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+LR+N + EIE +R
Sbjct: 305 ENAKQFLRENTDILFEIENKIR 326
>gi|255533438|ref|YP_003093810.1| recA protein [Pedobacter heparinus DSM 2366]
gi|255346422|gb|ACU05748.1| recA protein [Pedobacter heparinus DSM 2366]
Length = 337
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 249/326 (76%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL ++ + S+GKG+V +LG +E+ +G ++LD+ALG GG+PKGRI+EI
Sbjct: 6 DKLKALQLTLDKLEKSYGKGTVMKLGDNAVEPIESISTGSISLDIALGIGGVPKGRIIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA H IAE QK GG A +VDAEHAFD Y+K LGVDV+NL++ QPDNGE
Sbjct: 66 YGPESSGKTTLATHIIAEAQKKGGIAAIVDAEHAFDKGYAKKLGVDVDNLLISQPDNGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAID+I +DSV+AL P+AEIEGE+G ++GL ARLMSQALRK++G SK
Sbjct: 126 ALEIADNLIRSGAIDVIVIDSVAALVPKAEIEGEMGDSKMGLHARLMSQALRKLTGTISK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
GC IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR T +IK DE G RV
Sbjct: 186 TGCCCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRTSQIKD--SDEVSGNRV 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V++ K+KV+ P++ AEF+I+FGEG+SK G ++D +I+ + G+W+SYGD +LGQGR
Sbjct: 244 KVKIVKNKVAPPFRIAEFDIMFGEGISKTGEIIDLGVDFNIIKKAGSWFSYGDTKLGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
D Q L DNP L EEIE +R+ ++
Sbjct: 304 DAVKQLLMDNPELSEEIEAKIRAEVT 329
>gi|85715199|ref|ZP_01046183.1| recombinase A [Nitrobacter sp. Nb-311A]
gi|85698114|gb|EAQ35987.1| recombinase A [Nitrobacter sp. Nb-311A]
Length = 362
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV +LG ++ VE SG L LD+ALG GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVVSSGSLGLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
E++GPESSGKTTLALHA+AE QK GG +DAEHA DP Y++ LGV+V++L++ QPD+G
Sbjct: 74 EVYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ +DSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 NKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEG+SK+G +LD IV + GAW+SY QR+GQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSYDSQRMGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +LR NP + ++E +R
Sbjct: 312 GRENAKAFLRANPDITAKVEMAIR 335
>gi|239991215|ref|ZP_04711879.1| recombinase A [Streptomyces roseosporus NRRL 11379]
gi|291448212|ref|ZP_06587602.1| recombinase A [Streptomyces roseosporus NRRL 15998]
gi|291351159|gb|EFE78063.1| recombinase A [Streptomyces roseosporus NRRL 15998]
Length = 375
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 243/322 (75%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 8 DREKALDAALAQIERQFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A Q+ GG+ +DAEHA DP Y+K LGVD+++LI+ QPDNGE
Sbjct: 68 YGPESSGKTTLTLHAVANAQRQGGSVAFIDAEHALDPEYAKKLGVDIDSLILSQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 128 ALEITDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 188 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 245 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +L+DNP L EIEK +
Sbjct: 305 KENARNFLKDNPDLANEIEKKI 326
>gi|421860663|ref|ZP_16292769.1| RecA/RadA recombinase [Paenibacillus popilliae ATCC 14706]
gi|410829849|dbj|GAC43206.1| RecA/RadA recombinase [Paenibacillus popilliae ATCC 14706]
Length = 352
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/322 (54%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ AL+ A+ I FGKGS+ +LG + VE PSG L LD+ALG GGLP+GRI+E+
Sbjct: 3 DRRAALEMALRQIEKQFGKGSIMKLGESNHMQVEIVPSGSLALDIALGIGGLPRGRIIEV 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQ++GG A +DAEHA DP+Y+ LGV+++ L++ QPD GE
Sbjct: 63 YGPESSGKTTVALHAIAEVQRVGGQAAFIDAEHALDPAYASKLGVNIDELLLSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK+SG SK
Sbjct: 123 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAISK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +GNPE T GG ALKF++++RL++R IK +G + +G R
Sbjct: 183 SKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSTIRLDVRRVETIK--QGTDMIGNRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQA+ +I++GEG+S+ G ++D +DI+ + GAWYS+ +RLGQGR
Sbjct: 241 RIKVVKNKVAPPFKQADIDIMYGEGISREGSIVDIGTELDIIQKSGAWYSFEGERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L+++ L IE VR
Sbjct: 301 ENAKQFLKEHAELALTIENKVR 322
>gi|315640316|ref|ZP_07895433.1| recombination protein A [Enterococcus italicus DSM 15952]
gi|315483978|gb|EFU74457.1| recombination protein A [Enterococcus italicus DSM 15952]
Length = 347
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/329 (53%), Positives = 245/329 (74%), Gaps = 3/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKG+V +LG + T PSG L LD+ALG GG P+GRIVE+
Sbjct: 4 DRKAALDAALKRIEKNFGKGAVMKLGEKVDQKISTIPSGSLALDVALGVGGYPRGRIVEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ LGV++++L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKNGGTAAFIDAEHALDPQYAQNLGVNIDDLLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D++ +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAVDIVVIDSVAALVPRAEIDGEMGDTHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPE+T GG ALKF+A++RLE+R ++KS G + +G R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPEITPGGRALKFYATIRLEVRRAEQLKS--GTDIIGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P++ AE +I++GEG+S++G +LD A MDI+ + GAWYSY R+GQGR
Sbjct: 242 KIKVVKNKVAPPFRIAEVDIMYGEGISQVGELLDMAAEMDIIDKSGAWYSYKGDRIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ Y++++P + E+ VR GS
Sbjct: 302 ENVKSYMKEHPEMVAEVSARVRDAYGIGS 330
>gi|392531140|ref|ZP_10278277.1| recombinase A [Carnobacterium maltaromaticum ATCC 35586]
Length = 359
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/321 (55%), Positives = 240/321 (74%), Gaps = 3/321 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ AL A++ I FGKG++ +LG +ET SG + LD+ALG GG PKGRI+E++
Sbjct: 19 KHAALSKALSKIEKDFGKGAIMKLGEKTSMKIETISSGSIALDVALGVGGYPKGRILEVY 78
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHAIAE QK GG A +DAEHA DP Y+ ALGV++++L++ QPD GE A
Sbjct: 79 GPESSGKTTMALHAIAEAQKAGGTAAFIDAEHALDPKYAAALGVNIDDLLLSQPDTGEQA 138
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + SGA+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG+ +
Sbjct: 139 LEIADALVSSGAVDILVVDSVAALVPRAEIEGEMGQSHVGLQARLMSQALRKLSGSINNT 198
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
IF+NQIR K+GV +GNPEVT GG ALKF+A++RLE+R +IK+ G + +G R +
Sbjct: 199 KTICIFINQIREKVGVMFGNPEVTPGGRALKFYATIRLEVRRAEQIKT--GTDILGNRTK 256
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
++V K+KV+ P+K AE +I++GEG+S+ G ++D A DI+ + GAWYSY +R+GQGR+
Sbjct: 257 LKVVKNKVAPPFKIAEVDIMYGEGISRAGELVDMASDSDIIDKAGAWYSYNGERIGQGRE 316
Query: 390 KALQYLRDNPLLQEEIEKVVR 410
A +YL DNP L EIEK VR
Sbjct: 317 NAKKYLLDNPELYAEIEKKVR 337
>gi|302392234|ref|YP_003828054.1| recombinase A [Acetohalobium arabaticum DSM 5501]
gi|302204311|gb|ADL12989.1| RecA protein [Acetohalobium arabaticum DSM 5501]
Length = 349
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 238/323 (73%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+++ AL + I GKGS+ RLG A VE P+G L+LD+ALG GG+P+GRIVE+
Sbjct: 4 EKEEALKRTLKQIEKEHGKGSIMRLGEANTLDVEAIPTGALSLDVALGVGGIPRGRIVEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPE+SGKTT+ALH IAE QK+ G A +DAEHA DP Y+K LGVD++ L++ QP+ GE
Sbjct: 64 FGPEASGKTTVALHMIAETQKMDGVAAFIDAEHALDPKYAKNLGVDIDELLISQPNTGEE 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ VDSV+AL P AEIEGE+G +GLQARLMSQA+RK+SG SK
Sbjct: 124 ALEICESLVRSGAIDIVVVDSVAALVPEAEIEGEMGDSHVGLQARLMSQAMRKLSGTISK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T IF+NQIR K+GV +GNPE T GG ALKF++SVRL+IR IK GDE +G +
Sbjct: 184 SKTTCIFINQIREKVGVRFGNPETTPGGRALKFYSSVRLDIRRRKAIKD--GDEFLGNKT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ-RLGQG 387
RV+V K+KV+ P+K AEF+I++G G+SK GC+LD A DIV R GAWYSYGD LGQG
Sbjct: 242 RVKVVKNKVAPPFKTAEFDIMYGTGISKTGCILDMAVDHDIVERSGAWYSYGDDVTLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R + + L +NP L EIEK V+
Sbjct: 302 RANSKEALEENPELLAEIEKKVK 324
>gi|386852107|ref|YP_006270120.1| recombinase A [Actinoplanes sp. SE50/110]
gi|359839611|gb|AEV88052.1| recombinase A [Actinoplanes sp. SE50/110]
Length = 371
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/320 (55%), Positives = 243/320 (75%), Gaps = 5/320 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++AL+ A+ I+ FGKGSV RLG P+ + LD+ALG GGLP+GR++E+
Sbjct: 29 DREKALELALAQIDKQFGKGSVMRLGERPVVQTAVIPTSSIALDVALGVGGLPRGRVIEV 88
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A QK GG A +DAEHA DP Y++ALGVD + L+V QPD GE
Sbjct: 89 YGPESSGKTTVALHAVANAQKAGGTAAFIDAEHALDPDYARALGVDTDALLVSQPDTGEQ 148
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +
Sbjct: 149 ALEIADMLIRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGVLNN 208
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
G T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +I+S+K G + VG R
Sbjct: 209 TGTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDVR---RIESLKDGTDVVGNR 265
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 266 TRVKVVKNKVAAPFKQAEFDIMYGKGISREGSLIDVGVEQSIIRKSGAWYTYDGDQLGQG 325
Query: 388 RDKALQYLRDNPLLQEEIEK 407
++KA ++L++NP + EIEK
Sbjct: 326 KEKAREFLKENPDVAAEIEK 345
>gi|429726206|ref|ZP_19261012.1| RecA protein [Prevotella sp. oral taxon 473 str. F0040]
gi|429147451|gb|EKX90477.1| RecA protein [Prevotella sp. oral taxon 473 str. F0040]
Length = 358
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/325 (57%), Positives = 243/325 (74%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL AAM+ I FGKGS+ ++G VE P+G ++LD LG GG P+GRI+EI
Sbjct: 14 DKLKALQAAMSKIEKDFGKGSIMKMGDQEVEHVEVIPTGSISLDHVLGVGGYPRGRIIEI 73
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA+HAIAE QK GG A +DAEHAFD Y+K LGVD++NL + QPDNGE
Sbjct: 74 YGPESSGKTTLAIHAIAEAQKRGGIAAFIDAEHAFDRFYAKELGVDIDNLYISQPDNGEQ 133
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD++ RS AID+I +DSV+ALTP+AEIEG++G ++GLQARLMSQALRK++ SK
Sbjct: 134 ALEIADQLIRSSAIDIIVIDSVAALTPKAEIEGDMGDNKVGLQARLMSQALRKITATISK 193
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
T IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR IK G+ +G
Sbjct: 194 TNTTCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRASVIKD--GETPIGAIT 251
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+++ EFE+ FG+G+S+LG + D DI+ + G+WYSYG+ RLGQGR
Sbjct: 252 RVKVVKNKVAPPFQRCEFEMAFGKGISRLGEIADLGVEYDIIKKSGSWYSYGETRLGQGR 311
Query: 389 DKALQYLRDNPLLQEEI-EKVVRSM 412
+ + L DNP L EEI EK+V +M
Sbjct: 312 EGLKRVLTDNPELCEEITEKLVAAM 336
>gi|289548826|ref|YP_003473814.1| recA protein [Thermocrinis albus DSM 14484]
gi|289182443|gb|ADC89687.1| recA protein [Thermocrinis albus DSM 14484]
Length = 332
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 244/328 (74%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL++ + I FGKG++ L +A +VE P+G + LD+A G GG+P+GRIVE+
Sbjct: 6 EKKKALESVLASIERKFGKGAIMPLKNAERVVVEAIPTGSIALDIATGVGGIPRGRIVEL 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTLALH IAE QK GG A+ +DAEHA DP Y++ +GVD E L + QPD GE
Sbjct: 66 FGPESSGKTTLALHVIAEAQKNGGVAVFIDAEHALDPRYAEKIGVDTERLFISQPDYGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + SGA+D+I VDSV+AL P+ E+EG + +G QARLMSQALRK+ G A K
Sbjct: 126 ALEIAESLLSSGAVDVIVVDSVAALVPKDELEGSMEDIHVGKQARLMSQALRKLKGLAHK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
A +IF+NQ+R KIGV YGNPE T GG ALKFFA +RL+IR G +K +GD VG RV
Sbjct: 186 ANAAVIFINQLREKIGVMYGNPETTPGGRALKFFADMRLDIRKVGDLK--EGDGKVGSRV 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RVR+ K+K++ P+++AEF++I+GEG+ KL ++D A I+ + GAWYSYGD RLGQGR
Sbjct: 244 RVRIVKNKLAPPFQEAEFDVIYGEGICKLCDLIDTATQYGIIKKSGAWYSYGDVRLGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
D+ ++L++NP L EEIEK +R +++ G
Sbjct: 304 DQVKKFLQENPTLTEEIEKKLRELLNHG 331
>gi|374986096|ref|YP_004961591.1| recombinase A [Streptomyces bingchenggensis BCW-1]
gi|297156748|gb|ADI06460.1| recombinase A [Streptomyces bingchenggensis BCW-1]
Length = 378
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTL LHA+A Q+ GG VDAEHA DP Y++ LGVD ++LI+ QPDNGE
Sbjct: 65 FGPESSGKTTLTLHAVANAQRAGGAVAFVDAEHALDPDYAQKLGVDTDSLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 125 ALEITDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G E VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTEAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKSGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIE+ ++ + G
Sbjct: 302 KENARNFLKDNPDLANEIERKIKEKLGIG 330
>gi|217979628|ref|YP_002363775.1| recA protein [Methylocella silvestris BL2]
gi|217505004|gb|ACK52413.1| recA protein [Methylocella silvestris BL2]
Length = 355
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 250/332 (75%), Gaps = 7/332 (2%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET P+G L LD+ALG GGLP+GR+V
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNQKVVEIETVPTGSLGLDVALGVGGLPRGRVV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTL LH IAE QK GG +DAEHA D Y++ LGV++E+L+V QPD G
Sbjct: 74 EIYGPESSGKTTLTLHVIAEAQKKGGVCAFIDAEHALDTIYARKLGVNLEDLLVSQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGA+D++ +DSV+ALTPRAEIEGE+G Q GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSQPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G IK +E +G
Sbjct: 194 SRSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGSIKD--HEEVIGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+KV+ P+KQ EF+I++GEG+SK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKVAPPFKQVEFDIMYGEGISKIGELIDLGVKAGVVEKSGAWFSYDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRS---MMSD 415
GR+ + +L+ +P + ++IE +R M++D
Sbjct: 312 GRENSKAFLKAHPEIADKIELAIRENAGMIAD 343
>gi|375088958|ref|ZP_09735295.1| protein recA [Dolosigranulum pigrum ATCC 51524]
gi|374561125|gb|EHR32474.1| protein recA [Dolosigranulum pigrum ATCC 51524]
Length = 369
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 252/337 (74%), Gaps = 5/337 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ+ALD A+ +I +FGKGS+ ++G V + PSG L LD+ALG GG P+GRI+E+
Sbjct: 5 ERQKALDKALKNIEKNFGKGSIMKMGEKVDTEVRSVPSGSLALDVALGIGGYPRGRIIEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIA VQ+ GG A +DAEHA DP Y++ALGVDV+ L++ QPD GE
Sbjct: 65 YGPESSGKTTVALHAIAAVQEEGGVAAFIDAEHALDPKYARALGVDVDELLLSQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + SGAID+I VDSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 125 ALEITDALVASGAIDIIVVDSVAALVPRAEIDGEMGDAHVGLQARLMSQALRKLSGSINK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR KIGV +GNPE T GG ALKF++SVRLE+R KIKS G + G R
Sbjct: 185 TKTICMFINQIREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAEKIKS--GSDLTGNRT 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
++++ K+KV+ P+K A +I++G+G+S++G ++D D++ + GAWYSYG++RLGQGR
Sbjct: 243 KIKIVKNKVAPPFKTAMVDIMYGQGISQVGELVDMGADADVITKAGAWYSYGEERLGQGR 302
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
+ A ++L +N +++EI++ VR ++ G + + F R
Sbjct: 303 ENAKEFLEENLEIRKEIDRKVR--LAYGVIDEEEFER 337
>gi|15607092|ref|NP_214474.1| recombinase A [Aquifex aeolicus VF5]
gi|6225921|sp|O67905.1|RECA_AQUAE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|2984348|gb|AAC07868.1| recombination protein RecA [Aquifex aeolicus VF5]
Length = 345
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/322 (56%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++++AL+ A+++I FGKG+V L S VET P+G L LD+A G GG+PKGRI EI
Sbjct: 7 EKKKALEVALSNIEKRFGKGAVMPLKSVEKVQVETIPTGSLALDIATGVGGIPKGRITEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FG ESSGKTTLALH IAE QK GG A+ +DAEHA DP Y+K LGVDVENL + QPD GE
Sbjct: 67 FGVESSGKTTLALHVIAEAQKRGGVAVFIDAEHALDPKYAKKLGVDVENLYISQPDYGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + SGA+D+I VDSV+AL P+ E+EGE+G Q+G QARLMSQALRK+ G K
Sbjct: 127 ALEIAESLINSGAVDVIVVDSVAALVPKDELEGEMGEAQVGKQARLMSQALRKLKGAVHK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ LIF+NQIR KIGV +GNPE T GG ALKFF+ +RLE+R G +K +G E G RV
Sbjct: 187 SNTALIFINQIREKIGVMFGNPETTPGGRALKFFSDMRLEVRRLGDVK--EGGEKKGYRV 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+VRV K+K++ P+++AEF+II+GEG+ KL +++ A + I + G+WYSYGD+RLGQG+
Sbjct: 245 KVRVVKNKLAPPFQEAEFDIIYGEGICKLCDLIEVATNLGIFTKSGSWYSYGDKRLGQGK 304
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
++ +YL+++P L +EI++ VR
Sbjct: 305 EQVKKYLQEHPELIDEIDQKVR 326
>gi|227495167|ref|ZP_03925483.1| recombination protein A [Actinomyces coleocanis DSM 15436]
gi|226831619|gb|EEH64002.1| recombination protein A [Actinomyces coleocanis DSM 15436]
Length = 370
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/325 (53%), Positives = 244/325 (75%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR ++L+ A++ I+ FGKGSV RLG ++ P+G L LD+ALG GG P+GRI+E+
Sbjct: 6 DRNKSLELALSQIDKQFGKGSVMRLGDENRPAIQVIPTGSLALDVALGVGGFPRGRIIEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GGNA +DAEHA DP Y+K LGV+ + L+V QPD GE
Sbjct: 66 YGPESSGKTTVALHAVASAQRQGGNAAFIDAEHALDPEYAKKLGVNTDELLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSG ID+I +DSV+AL P+AEIEG++G +GLQARLMSQALRK++G S
Sbjct: 126 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGALSA 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVRL++R +K +G VG R
Sbjct: 186 TGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRLDVRRIETLK--EGSNPVGNRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++G+G+S+ G ++D +++ + G+W++YG +LGQG+
Sbjct: 244 RVKVVKNKMAPPFKQAEFDILYGQGISREGSIIDMGVETNVIKKSGSWFTYGSDQLGQGK 303
Query: 389 DKALQYLRDNPLLQEEIE-KVVRSM 412
+ +L+DNP L EIE K++ +M
Sbjct: 304 ENVRNFLKDNPELANEIEHKILVAM 328
>gi|217969145|ref|YP_002354379.1| recombinase A [Thauera sp. MZ1T]
gi|217506472|gb|ACK53483.1| recA protein [Thauera sp. MZ1T]
Length = 345
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 245/325 (75%), Gaps = 8/325 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL---VETFPSGCLTLDLALG-GGLPKGRI 145
++ +AL AA++ I FGKGS+ R+G G++ ++T +G L LD+ALG GGLP+GR+
Sbjct: 4 NKAKALSAALSQIEKQFGKGSIMRMGD--GSIERDIQTVSTGSLGLDIALGLGGLPRGRV 61
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
VEI+GPESSGKTTL L IAE+QKLGG A +DAEHA D Y++ LGVD+E+L++ QPD
Sbjct: 62 VEIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDVGYAEKLGVDIEDLLISQPDT 121
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEIAD + RSG +D++ +DSV+ALTP+AEIEGE+G Q GLQARLMSQALRK++ N
Sbjct: 122 GEQALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTAN 181
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
+ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVR++IR TG IK KGDE VG
Sbjct: 182 IKRTNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRMDIRRTGTIK--KGDEVVG 239
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
RV+V K+KVS P+K+A F+I++GEG+S+ G ++D IV + GAWY+Y ++G
Sbjct: 240 SETRVKVVKNKVSPPFKEAHFDILYGEGISREGEIIDLGVEHKIVDKSGAWYAYKGDKIG 299
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVR 410
QG+D + ++LR NP+L EIE VR
Sbjct: 300 QGKDNSREFLRANPVLAREIENKVR 324
>gi|261368036|ref|ZP_05980919.1| protein RecA [Subdoligranulum variabile DSM 15176]
gi|282570024|gb|EFB75559.1| RecA protein [Subdoligranulum variabile DSM 15176]
Length = 392
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/323 (54%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D++ AL+ A+ I FGKG+V +LG+ V+ P+G L LDLALG GGLP+GRI+EI
Sbjct: 17 DKKAALETALAQIEKQFGKGAVMKLGANVTMQVDAIPTGSLGLDLALGIGGLPRGRIIEI 76
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLAL +AE QK+GG +D EHA DP+Y+ ALGVD+++L+V QPD GE
Sbjct: 77 YGPESSGKTTLALQVLAEAQKMGGEVAFIDVEHALDPAYASALGVDIDSLLVSQPDTGEQ 136
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
A+EI + + RSGAID + VDSV+A+ PRAEIEGE+G +GLQARLMSQALRK++G K
Sbjct: 137 AMEICEALVRSGAIDAVVVDSVAAMVPRAEIEGEMGDSHVGLQARLMSQALRKLTGVIGK 196
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQ+R K+G+ YGNPEVT+GG ALK+++SVR+++R +K G +G R
Sbjct: 197 TNTVCIFINQLREKVGIVYGNPEVTTGGRALKYYSSVRIDVRRIEGLKDSTG-AFIGNRT 255
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R ++ K+KV+ P+++AEF+I+FGEG+SK+G +LD + IV + GAW++YG+ RLGQGR
Sbjct: 256 RAKIVKNKVAPPFREAEFDIMFGEGISKIGEILDLGVKLGIVQKSGAWFNYGEMRLGQGR 315
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
D A Q+L+++P + +EIEK+VR+
Sbjct: 316 DNAKQFLKEHPEVSDEIEKIVRA 338
>gi|260061218|ref|YP_003194298.1| recombinase A [Robiginitalea biformata HTCC2501]
gi|88785350|gb|EAR16519.1| recombinase A [Robiginitalea biformata HTCC2501]
Length = 335
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/310 (57%), Positives = 239/310 (77%), Gaps = 2/310 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G VE PSG L LD+ALG GG P+GR+VEI+
Sbjct: 8 KLKALKLTLDKLDKTYGKGTVMKMGDDVAQDVEVIPSGSLGLDVALGVGGYPRGRVVEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y+K LGVD++NLI+ QPD+GE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAKNLGVDIDNLIISQPDHGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID+I VDSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ + SK
Sbjct: 128 LEIADNLIRSGAIDIIVVDSVAALTPKSEIEGEMGDSKVGLHARLMSQALRKLTASISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF++SVRL+IR + +IK+ GD G + R
Sbjct: 188 HCTVIFINQLREKIGVMFGNPETTTGGNALKFYSSVRLDIRRSTQIKNTDGDVQ-GNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ EF+I++GEG+SK+G +LD +I+ + G+W+SYGD +LGQGRD
Sbjct: 247 VKVVKNKVAPPFRTVEFDIMYGEGISKVGEILDIGVDYEIIQKSGSWFSYGDTKLGQGRD 306
Query: 390 KALQYLRDNP 399
L+DNP
Sbjct: 307 AVKILLKDNP 316
>gi|332291715|ref|YP_004430324.1| recA protein [Krokinobacter sp. 4H-3-7-5]
gi|332169801|gb|AEE19056.1| recA protein [Krokinobacter sp. 4H-3-7-5]
Length = 335
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/317 (55%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G VE+ P+G L LD+ALG GG P+GR++EI+
Sbjct: 8 KLKALKLTLDKLDKTYGKGAVMKMGDQAIVDVESIPTGSLGLDVALGVGGYPRGRVIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIA+ QK GG A +DAEHAFD Y++ LGVD++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAQAQKAGGIAAFIDAEHAFDRFYAEKLGVDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ VDSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G+ SK
Sbjct: 128 LEIADNLIRSGAIDIVVVDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGSISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK + +G + R
Sbjct: 188 NCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDSNANV-MGNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I++GEG+SK+G ++D +IV + G+W+SY D +LGQGRD
Sbjct: 247 VKVVKNKVAPPFRMAEFDIMYGEGISKVGEIIDIGVNYEIVKKAGSWFSYQDTKLGQGRD 306
Query: 390 KALQYLRDNPLLQEEIE 406
L DNP L +E+E
Sbjct: 307 AVKALLLDNPDLMDELE 323
>gi|257068236|ref|YP_003154491.1| recombination protein RecA [Brachybacterium faecium DSM 4810]
gi|256559054|gb|ACU84901.1| protein RecA [Brachybacterium faecium DSM 4810]
Length = 368
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 244/325 (75%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR +LD A+ I+ FGKGS+ RLG VE P+G + LD ALG GGLP+GRIVEI
Sbjct: 14 DRGSSLDNALAQIDRQFGKGSIMRLGDDTRPPVEVIPTGSVALDAALGVGGLPRGRIVEI 73
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALHA+A Q+ GG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 74 YGPESSGKTTLALHAVANAQRNGGIAAFIDAEHAMDPEYAKKLGVDTDALLVSQPDTGEQ 133
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 134 ALEITDMLIRSGALDIVVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSS 193
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR +K+ G + VG R
Sbjct: 194 SGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRMDIRRIETLKA--GTDSVGNRT 251
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++GEG+S+ G +LD +V + GAW++Y +LGQG+
Sbjct: 252 RVKVVKNKMAPPFKQAEFDILYGEGISREGGLLDLGVEHGVVRKSGAWFTYEGDQLGQGK 311
Query: 389 DKALQYLRDNPLLQEEI-EKVVRSM 412
+ + Q+L+DNP L EI EK++R++
Sbjct: 312 ENSRQFLKDNPDLAAEIEEKILRTL 336
>gi|150016100|ref|YP_001308354.1| recombinase A [Clostridium beijerinckii NCIMB 8052]
gi|172046855|sp|P42441.2|RECA_CLOB8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|149902565|gb|ABR33398.1| recA protein [Clostridium beijerinckii NCIMB 8052]
Length = 361
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +A+++AM+ I FGKGSV +LG + ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 EKLKAIESAMSHIEKQFGKGSVMKLGDHNISNMDAISTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH AE QK GG +DAEHA DPSY++ LGVDV++LI+ QPD GE
Sbjct: 67 YGPESSGKTTIALHIAAESQKKGGAVGYIDAEHALDPSYAQKLGVDVDSLIISQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIA+ + RSGAID++ VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G +K
Sbjct: 127 GLEIAEALVRSGAIDVLVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C IF+NQ+R K+GV +G+PE T+GG ALKF+ASVRL+IR IK +GD +G R
Sbjct: 187 TNCVAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDIRRIDSIK--QGDSIIGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQAEF+I++ EG+S+ G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RIKVMKNKVAPPFKQAEFDIMYNEGISRCGNIVDVGVKEEIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A YL++NP + +IE +R
Sbjct: 305 ENAKLYLKENPEVALDIENQIR 326
>gi|260583531|ref|ZP_05851279.1| protein RecA [Granulicatella elegans ATCC 700633]
gi|260158157|gb|EEW93225.1| protein RecA [Granulicatella elegans ATCC 700633]
Length = 351
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/328 (53%), Positives = 248/328 (75%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQRALD A+ I S+GKG+V +LG + V+T SG L LD+ALG GG PKGRI+EI
Sbjct: 6 NRQRALDDALKKIEKSYGKGAVMKLGEKADSQVQTVSSGSLALDIALGAGGYPKGRIIEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTT+ALHA+AEVQK GG A +DAEHA DP Y++ALGV++E L++ QPD GE
Sbjct: 66 FGPESSGKTTVALHAVAEVQKRGGVAAFIDAEHALDPEYARALGVNIEELLLSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
L IAD + SGA+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK+SG ++
Sbjct: 126 GLGIADALVASGAVDIVIVDSVAALVPRAEIEGDMGQSHVGLQARLMSQALRKLSGTINR 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQ+R K+G+ +GNPE T GG ALKF+AS+RL++R + +IK+ G E +G
Sbjct: 186 TKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASIRLDVRRSDQIKN--GAEILGNHT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+S++G +LD A +D+V + GAWY+Y D+++GQGR
Sbjct: 244 KIKVVKNKVAPPFKTAEVDIMYGEGISQIGEILDMASDLDLVKKSGAWYAYNDEKIGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ A +YL ++P + + + + +R+ + G
Sbjct: 304 ENAKKYLTEHPEIVDVLTQKIRAHYNIG 331
>gi|86134785|ref|ZP_01053367.1| protein RecA [Polaribacter sp. MED152]
gi|85821648|gb|EAQ42795.1| protein RecA [Polaribacter sp. MED152]
Length = 335
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/326 (54%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKGSV +LG V+ SG L LDLALG GG P+GR++EI+
Sbjct: 10 KLKALQLTLDKLDKTYGKGSVMKLGDVVTEDVDAISSGSLGLDLALGVGGYPRGRVIEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL +HAIAE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPD+GE A
Sbjct: 70 GPESSGKTTLTIHAIAEAQKAGGIAAFIDAEHAFDKFYAENLGVDIDNLIISQPDHGEQA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G SK
Sbjct: 130 LEIADNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGTISKT 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR +IK GD +G +
Sbjct: 190 NCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRRTQIKD--GDRVIGNSTK 247
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P++ AEF+I++G+G+SK+G +LD + IV + G+W+SYGD +LGQGRD
Sbjct: 248 VKIVKNKVAPPFQIAEFDIMYGQGISKVGEILDIGVELGIVKKSGSWFSYGDTKLGQGRD 307
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSD 415
++DNP L EE+E ++ + +
Sbjct: 308 AVKGLIKDNPELMEELEMKIKDAIEN 333
>gi|126662800|ref|ZP_01733799.1| recombinase A [Flavobacteria bacterium BAL38]
gi|126626179|gb|EAZ96868.1| recombinase A [Flavobacteria bacterium BAL38]
Length = 334
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 168/328 (51%), Positives = 251/328 (76%), Gaps = 3/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V +LG + +E PSG L +DLALG G P+GR++EI+
Sbjct: 8 KLKALQLTLDKLDKTYGKGTVMKLGDSAVEEIEAIPSGSLGIDLALGVNGYPRGRVIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LG+D++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAEKLGIDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIA+ + RSGA+D++ +DSV+ALTP++EIEG++G ++GL ARLMSQALRK++G K
Sbjct: 128 LEIAESLIRSGAVDIVVIDSVAALTPKSEIEGDMGDSKMGLHARLMSQALRKLTGTIHKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+ F+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR + +IK GD +G R +
Sbjct: 188 NCTVFFINQLRDKIGVMFGSPETTTGGNALKFYASVRIDIRKSTQIKD--GDNVLGNRTK 245
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P++ AEF+I++GEG+SK+G +LD A +++ + G+W+SYG+ +LGQGRD
Sbjct: 246 VKIVKNKVAPPFRTAEFDIMYGEGISKVGEVLDLAVEFEVIKKSGSWFSYGETKLGQGRD 305
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++DNP L +E+E+ ++ ++ + +
Sbjct: 306 AVKALIKDNPELMDELEQKIKDLIKENN 333
>gi|225936948|emb|CAJ82771.1| recA recombinase [Enterococcus dispar ATCC 51266]
Length = 345
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/331 (54%), Positives = 245/331 (74%), Gaps = 5/331 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I ++GKG+V +LG + T PSG L LD+ALG GG P+GRIVEI
Sbjct: 4 DRKSALDAALKKIEKNYGKGAVMKLGEKADQQISTIPSGSLALDVALGVGGYPRGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKNGGTAAFIDAEHALDPLYAQNLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGAID++ +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAIDIVVIDSVAALVPRAEIDGEMGDAHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+G+ +GNPE T GG ALKF+A++RLE+R ++KS G + +G R
Sbjct: 184 TKTIAVFINQIREKVGIMFGNPETTPGGRALKFYATIRLEVRRAEQLKS--GTDIIGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE ++++G+G+S+ G +LD A DIV + GAWYSY R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDLMYGQGISQEGELLDMASEQDIVDKSGAWYSYKGDRIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSM--MSDGS 417
D A Y++++P ++ EI VR + DGS
Sbjct: 302 DNAKNYMKEHPEMKAEISTRVREAYGIGDGS 332
>gi|585797|sp|Q08327.1|RECA_ACEPO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|300185|gb|AAC60438.1| RecA [Gluconacetobacter polyoxogenes]
gi|391592|dbj|BAA02478.1| RecA protein [Gluconacetobacter polyoxogenes]
Length = 348
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/323 (55%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGS+ R+G V+ +G L LD+ALG GGLP+GRI+E
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERPTEQVDVISTGSLGLDIALGIGGLPRGRIIE 66
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALHAIAE Q+ GG +DAEHA DP Y++ LGVDV+NL++ QPD GE
Sbjct: 67 IYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGE 126
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G+ S
Sbjct: 127 QALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVS 186
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ LIFLNQIR KIGV +G+PE T+GG ALKF+ASVR++IR G IK DE G +
Sbjct: 187 RSNTMLIFLNQIRLKIGVMFGSPESTTGGNALKFYASVRMDIRRIGSIKD--KDEVTGNQ 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G ++D IV + GAW+S QR+GQG
Sbjct: 245 TRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A Q+LRD+P + +IE+ VR
Sbjct: 305 RENAKQFLRDHPEMAADIERRVR 327
>gi|225936942|emb|CAJ82767.1| recA recombinase [Enterococcus asini]
Length = 348
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I ++GKG+V +LG + PSG L LD+ALG GG P+GRI+E+
Sbjct: 4 DRKTALDAALKKIEKNYGKGAVMKLGEKIDQQIAVIPSGSLALDVALGVGGYPRGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ LGVD++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKSGGTAAFIDAEHALDPLYAQKLGVDIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAVDIVVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR KIGV +GNPE T GG ALKF+A++RLE+R ++KS G + +G R
Sbjct: 184 TKTIAIFINQIREKIGVMFGNPETTPGGRALKFYATIRLEVRRAEQLKS--GTDIIGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++G+G+S+ G +LD A DIV + GAWY+Y R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKLAEVDIMYGQGISQEGELLDMAVDKDIVDKSGAWYAYKGDRIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
D A Y++++P ++ EI ++VR+
Sbjct: 302 DNAKNYMKEHPEMKAEINQLVRA 324
>gi|380301953|ref|ZP_09851646.1| recombination protein RecA [Brachybacterium squillarum M-6-3]
Length = 365
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 244/325 (75%), Gaps = 4/325 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+R LDAA+ I+ FGKGSV RLG VE P+G + LD ALG GGLP+GRIVE+
Sbjct: 10 ERASTLDAALAQIDRQFGKGSVMRLGEDTRPPVEVIPTGSVALDAALGIGGLPRGRIVEV 69
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+A Q+ GG A +DAEHA DP Y+K LGVD + L+V QPD GE
Sbjct: 70 YGPESSGKTTVALHAVASAQRNGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 129
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G S
Sbjct: 130 ALEIADMLVRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSA 189
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+G T IF+NQ+R KIGV++G+PE T+GG ALKF+ASVR++IR +KS G + VG R
Sbjct: 190 SGTTAIFINQLREKIGVFFGSPETTTGGKALKFYASVRMDIRRIETLKS--GQDSVGNRT 247
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++GEG+S+ G ++D +V + GAW++Y +LGQG+
Sbjct: 248 RVKVVKNKMAPPFKQAEFDILYGEGISREGGLIDLGVEHGVVRKSGAWFTYEGDQLGQGK 307
Query: 389 DKALQYLRDNPLLQEEI-EKVVRSM 412
+ A Q+L+DN L EI EK++R++
Sbjct: 308 ENARQFLKDNTDLAAEIEEKILRTL 332
>gi|414155169|ref|ZP_11411484.1| Protein RecA [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453219|emb|CCO09388.1| Protein RecA [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 348
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 258/345 (74%), Gaps = 7/345 (2%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+Q+AL+ A+ I FGKGS+ +LG A VE +G L+LD+ALG GGLP+GR+VEI
Sbjct: 3 DKQKALELALAHIEKHFGKGSIMKLGDATKLNVEAISTGALSLDIALGVGGLPRGRVVEI 62
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH IAE Q+ G A +DAEHA DP Y++ LGVD+ENL+V QPD GE
Sbjct: 63 YGPESSGKTTVALHVIAEAQRNNGMAAFIDAEHALDPVYARRLGVDIENLLVSQPDTGEQ 122
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G SK
Sbjct: 123 ALEICEALVRSGAIDVVVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGIVSK 182
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ T+IF+NQIR K+G+ YG+PEVT+GG ALKF+ASVR+E+R IK +G + +G R
Sbjct: 183 SKTTVIFINQIREKVGIVYGSPEVTTGGRALKFYASVRMEVRKHENIK--QGTDIIGSRT 240
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQAEF+I++G G+SK G +LD A + I+ + GAWYSYGD+RLGQGR
Sbjct: 241 RVKIVKNKVAPPFKQAEFDIMYGTGISKEGSLLDVATDLKIISKSGAWYSYGDERLGQGR 300
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQE 433
+ + L++ P L +EIE+ VR ++ G G+ L V+ P +
Sbjct: 301 ENVKELLKERPELAQEIERKVREKLAMG----GAELPTVNGPTDD 341
>gi|443623641|ref|ZP_21108138.1| putative protein RecA [Streptomyces viridochromogenes Tue57]
gi|443342884|gb|ELS57029.1| putative protein RecA [Streptomyces viridochromogenes Tue57]
Length = 377
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 243/329 (73%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E +G LD+ALG GGLP+GR+VEI
Sbjct: 8 DREKALDAALAQIERQFGKGAVMRMGERSKEPIEVISTGSTALDVALGVGGLPRGRVVEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 68 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 128 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G E VG R
Sbjct: 188 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTEAVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 245 TRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIEK ++ + G
Sbjct: 305 KENARNFLKDNPDLANEIEKKIKEKLGVG 333
>gi|299144062|ref|ZP_07037142.1| protein RecA [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518547|gb|EFI42286.1| protein RecA [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 341
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 254/324 (78%), Gaps = 5/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+++++AL+ A++ I +GKGS+ +LG+ +ET P+G L LDL+LG GG+PKGRI+E
Sbjct: 3 IEKKKALELAISQIEKQYGKGSIMKLGADSKLDIETIPTGSLALDLSLGVGGIPKGRIIE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTTLALH +AE QK+GG +DAEHA DPSY+K LGVDVENLIV QPD GE
Sbjct: 63 VYGPESSGKTTLALHILAESQKMGGIGAFIDAEHALDPSYAKNLGVDVENLIVSQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + + RS A+D++ VDSV+AL P+AEIEGE+G IGLQARLMSQALRK++G +
Sbjct: 123 QALEIIESLVRSNAVDIVIVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLTGAIN 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGV 326
K+ ++IF+NQ+R K+GV +GNPE T+GG ALKF++S+RLEIR K++++K G+E VG
Sbjct: 183 KSKASVIFINQLREKVGVMFGNPETTTGGRALKFYSSIRLEIR---KVENLKLGEEIVGN 239
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
RVRV+V K+KV+ P+KQAEF+I++G+G+SK G ++D D+V + GAWYSYG+ RLGQ
Sbjct: 240 RVRVKVVKNKVAPPFKQAEFDIMYGKGISKEGTLIDVGVQTDVVTKSGAWYSYGEHRLGQ 299
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A ++L NP + EIE ++
Sbjct: 300 GRENAKEFLLANPDISREIEMKIK 323
>gi|377555585|ref|ZP_09785313.1| recombinase A [endosymbiont of Bathymodiolus sp.]
Length = 341
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/322 (54%), Positives = 240/322 (74%), Gaps = 4/322 (1%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEI 148
+++AL A+ I+ FGKGSV LG AG +E +G L+LD+ALG GGLP+GR++EI
Sbjct: 5 KKQALKVALTQIDKQFGKGSVMFLGDAGANTDIEAVSTGSLSLDIALGIGGLPRGRVIEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LH IAE+QKLGG A +DAEHA DP Y+K LGV+ + L++ QPD GE
Sbjct: 65 YGPESSGKTTLTLHVIAEMQKLGGTAAFIDAEHALDPQYAKRLGVNTDELLISQPDTGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSG +D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++ N K
Sbjct: 125 ALEITDMLVRSGGVDIVVVDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIKK 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR G IK KGDE +G
Sbjct: 185 TNTMVIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--KGDEILGNET 242
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+KQAEF+I++ EG+S+ ++D +V + GAWYS G +R+GQG+
Sbjct: 243 RVKVLKNKVAPPFKQAEFQILYNEGISRESEIIDLGVKHGLVDKAGAWYSVGSERIGQGK 302
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
D A YL+++P + ++E+ ++
Sbjct: 303 DNARDYLKEHPKMSTDLEEKIK 324
>gi|344943375|ref|ZP_08782662.1| Protein recA [Methylobacter tundripaludum SV96]
gi|344260662|gb|EGW20934.1| Protein recA [Methylobacter tundripaludum SV96]
Length = 345
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++++AL AA+ I FGKGSV R+G + ++ +G L LD+ALG GGLP+GR++E
Sbjct: 4 NKKKALGAALMQIEKQFGKGSVMRMGDVAASRDIDVVSTGSLGLDIALGCGGLPRGRVIE 63
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTL L IAE+QKLGG A VDAEHA DPSY++ +GV+V++L+V QPD GE
Sbjct: 64 IYGPESSGKTTLTLQVIAEMQKLGGTAAFVDAEHALDPSYAEKIGVNVDDLLVSQPDTGE 123
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI D + RSGA+D++ +DSV+ALTP+AEIEG++G +GLQARLMSQALRK++GN
Sbjct: 124 QALEITDMLVRSGAVDVVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIK 183
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK KG+E +G
Sbjct: 184 RSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--KGEEVIGNE 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++QAEFEI++GEG+S LG ++D + + G+WYSYGD+++GQG
Sbjct: 242 TRVKVVKNKVAPPFRQAEFEILYGEGISFLGELVDLGVSYGFIQKAGSWYSYGDEKIGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
+D +LR++P +EIE +R+
Sbjct: 302 KDNVKAFLREHPEKAKEIEAKIRA 325
>gi|253576029|ref|ZP_04853362.1| recA protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844604|gb|EES72619.1| recA protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 346
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 246/322 (76%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
+RQ AL+ A+ +I S+GKG+V +LG A VET SG L LD+ALG GG P+GRI+E+
Sbjct: 6 NRQAALEKALKEIEKSYGKGAVMKLGEAAHVQVETVSSGNLALDIALGVGGFPRGRIIEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQKLGG A +DAEHA DP Y+K +GV+++ L++ QPD GE
Sbjct: 66 YGPESSGKTTVALHAIAEVQKLGGQAAFIDAEHALDPLYAKNIGVNIDELLLSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + R+GA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQA+RK+SG+ SK
Sbjct: 126 ALEIADALVRTGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQAMRKLSGSLSK 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQ+R K+GV +G+PEVT GG ALKF++SVRL++R IK G+E VG R
Sbjct: 186 SKTIAIFINQLREKVGVSFGSPEVTPGGRALKFYSSVRLDVRRMETIKL--GNEMVGSRT 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R++V K+KV+ P+KQ E ++++GEG+SK +LD +++V + G+W+SY RLGQGR
Sbjct: 244 RIKVVKNKVAPPFKQVEVDMMYGEGISKEATLLDLGVELNVVEKSGSWFSYAGDRLGQGR 303
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A Q+L+++P + +I+ +R
Sbjct: 304 ENAKQFLKEHPEVAFKIDSEIR 325
>gi|392394096|ref|YP_006430698.1| protein RecA [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525174|gb|AFM00905.1| protein RecA [Desulfitobacterium dehalogenans ATCC 51507]
Length = 346
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 252/328 (76%), Gaps = 4/328 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALD A++ I FGKGS+ RLG A + VE P+GCL +D+ALG GG+P+GRI+E
Sbjct: 5 DKLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRIIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTT+ALH AE QKLGG A +DAEHA DP Y+KALGV+++NL+V QPD GE
Sbjct: 65 IYGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLVSQPDTGE 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + + RSGAID++ +DSV+AL PRAEIEGE+G +GL ARLMSQALRK++G S
Sbjct: 125 QALEICEALVRSGAIDVVIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ +IF+NQIR K+G+ +GNPE T+GG ALKF+ASVRLE+R +K +G + +G R
Sbjct: 185 KSNTCVIFINQIREKVGIMFGNPETTTGGRALKFYASVRLEVRRQDTLK--QGQDMIGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
+V+V K+KV+ P+KQAEF+I++GEG+S+ G ++D +DI+ + GAWYSY +RLGQG
Sbjct: 243 TKVKVVKNKVAPPFKQAEFDIMYGEGISRQGSIVDVGAELDIINKSGAWYSYKGERLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSD 415
R+ ++L+ +P + EIE+ +R+ +++
Sbjct: 303 RENVKEFLKQHPDIAAEIEQSIRASITN 330
>gi|331003604|ref|ZP_08327100.1| RecA protein [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412324|gb|EGG91716.1| RecA protein [Lachnospiraceae oral taxon 107 str. F0167]
Length = 389
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/353 (51%), Positives = 259/353 (73%), Gaps = 7/353 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
++Q AL++A+ I ++GKGSV +LG + VET P+G L LD+ALG GG+PKGRI+E
Sbjct: 21 EKQAALESALTQIEKAYGKGSVMKLGDENTHMHVETIPTGSLGLDIALGVGGIPKGRIIE 80
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ALH +AE QKLGG A +DAEHA DP+Y++ +GV++ L V QPDNGE
Sbjct: 81 VYGPESSGKTTVALHMVAEAQKLGGIAAFIDAEHALDPAYAEKIGVNINELYVSQPDNGE 140
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEI + M RSGA+D+I VDSV+AL P+ EIEG++G +GLQARLMSQ LRK++G S
Sbjct: 141 QALEITETMVRSGAVDIIIVDSVAALVPKGEIEGDMGDSHMGLQARLMSQGLRKLTGIVS 200
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL++R +IK +G E +G +
Sbjct: 201 KSNCIVIFINQLRDKIGVMFGSPETTTGGRALKFYASVRLDVRKVEQIK--QGGELIGTK 258
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R++V K+KV+ P+K+AEF+I++G G+SK G +LD A D++ + GAWYSY ++GQG
Sbjct: 259 TRIKVVKNKVAPPFKEAEFDIMYGLGISKSGEILDLAVASDVIDKGGAWYSYEGNKIGQG 318
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEEF 440
R+ A ++L DNP + ++IE+ VR S + + S+ + E+ EEF
Sbjct: 319 RENAKKFLMDNPEICKKIEEQVRETFKTTSENDDKQIEYDSVDDVED---EEF 368
>gi|325286323|ref|YP_004262113.1| protein recA [Cellulophaga lytica DSM 7489]
gi|324321777|gb|ADY29242.1| Protein recA [Cellulophaga lytica DSM 7489]
Length = 354
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/317 (56%), Positives = 241/317 (76%), Gaps = 2/317 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKGSV ++G V SG L LD+ALG GG P+GR+VEI+
Sbjct: 27 KLKALKLTLDKLDKTYGKGSVMKMGDKVVEDVAVISSGSLGLDIALGVGGYPRGRVVEIY 86
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVD++NLI+ QPD+GE A
Sbjct: 87 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAEKLGVDIDNLIISQPDHGEQA 146
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ VDSV+ALTP++EIEGE+G ++GL ARLMSQALRK++ + SK
Sbjct: 147 LEIADNLIRSGAIDIVIVDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTSSISKT 206
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK+ GD G + R
Sbjct: 207 NCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKNTDGDVQ-GNKTR 265
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ EF+I++G+GVSK+G +LD +I+ + G+W+SYGD +LGQGRD
Sbjct: 266 VKVVKNKVAPPFRTTEFDIMYGQGVSKVGEILDLGVQYEIIKKSGSWFSYGDTKLGQGRD 325
Query: 390 KALQYLRDNPLLQEEIE 406
L DNP L EE+E
Sbjct: 326 AVKSILADNPELLEELE 342
>gi|744163|prf||2014250A recA-like protein
Length = 377
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 244/329 (74%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E +G LD+ALG GGLP+GR+VEI
Sbjct: 5 DREKALDAALAQIERQFGKGAVMRMGDRTQEPIEVISTGSTALDIALGVGGLPRGRVVEI 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALR ++ ++
Sbjct: 125 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRNITSALNQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGTDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L +EIE+ ++ + G
Sbjct: 302 KENARNFLKDNPDLADEIERKIKEKLGVG 330
>gi|91976208|ref|YP_568867.1| recombinase A [Rhodopseudomonas palustris BisB5]
gi|91682664|gb|ABE38966.1| RecA protein [Rhodopseudomonas palustris BisB5]
Length = 363
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV RLG ++ +ET SG L LD+ALG GGLPKGR+V
Sbjct: 15 MDKTKALTAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVV 74
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV+V+ L++ QPD+G
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 134
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGAID++ VDSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G+IK + DE VG
Sbjct: 195 NKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGQIK--ERDEVVGN 252
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD IV + GAW+S+ QRLGQ
Sbjct: 253 QTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVDKSGAWFSHDSQRLGQ 312
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A +L+ NP L +IE +R
Sbjct: 313 GRENAKAFLKANPDLTAKIEASIR 336
>gi|332655312|ref|ZP_08421052.1| protein RecA [Ruminococcaceae bacterium D16]
gi|332515817|gb|EGJ45427.1| protein RecA [Ruminococcaceae bacterium D16]
Length = 369
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 254/323 (78%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+++AL+ AM I ++GKGS+ RLG +VE+ P+G L+LDLALG GG+P+GRI+EI
Sbjct: 16 DKKKALETAMAQIERAYGKGSIMRLGENVDVMVESIPTGSLSLDLALGIGGMPRGRIIEI 75
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH +AE QK GG +DAEHA DP+Y++ALGVD++++++ QPD GE
Sbjct: 76 YGPESSGKTTLALHVVAEAQKRGGEVAFIDAEHALDPTYARALGVDIDSMLIAQPDTGEQ 135
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEI + + RSGAID++ VDSV+ALTPRAEIEG++G +GL ARLMSQALRK++G+ +K
Sbjct: 136 GLEICEALVRSGAIDVVVVDSVAALTPRAEIEGDMGDSHVGLLARLMSQALRKLAGSIAK 195
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C +IF+NQ+R K+GV YGNPEVT+GG ALKF++SVR+++R +KS G E +G R
Sbjct: 196 TNCIVIFINQLREKVGVVYGNPEVTTGGRALKFYSSVRIDVRRIEALKS--GSEIIGNRT 253
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
R ++ K+KV+ P+++AEF+I++GEG+SK+G ++D +D+V + G+W++ G+ RLGQGR
Sbjct: 254 RAKIVKNKVAPPFREAEFDIMYGEGISKVGELIDLGVKLDLVQKSGSWFAMGELRLGQGR 313
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
D A Q+LRDNP L +E+E +R+
Sbjct: 314 DAAKQFLRDNPDLADELEAKIRA 336
>gi|340349821|ref|ZP_08672824.1| recombination protein A [Prevotella nigrescens ATCC 33563]
gi|445114459|ref|ZP_21377921.1| protein recA [Prevotella nigrescens F0103]
gi|339610024|gb|EGQ14885.1| recombination protein A [Prevotella nigrescens ATCC 33563]
gi|444840688|gb|ELX67714.1| protein recA [Prevotella nigrescens F0103]
Length = 340
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 239/323 (73%), Gaps = 3/323 (0%)
Query: 93 RALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGP 151
+AL AAM+ I FGKGS+ R+G VE P+G + LD+ALG GG P+GRI+EI+GP
Sbjct: 15 KALQAAMSKIEKDFGKGSIMRMGDELIEDVEVIPTGSIGLDVALGVGGYPRGRIIEIYGP 74
Query: 152 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALE 211
ESSGKTTLA+HAIAE QK GG A +DAEHAFD Y++ LGVDV+NL + QPDNGE ALE
Sbjct: 75 ESSGKTTLAIHAIAEAQKAGGIAAFIDAEHAFDRFYAQKLGVDVDNLWISQPDNGEQALE 134
Query: 212 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGC 271
IAD++ RS AID++ VDSV+ALTP+ EIEG++G +GLQARLMSQALRK++ SK
Sbjct: 135 IADQLIRSSAIDILVVDSVAALTPKKEIEGDMGESNVGLQARLMSQALRKLTSTISKTNT 194
Query: 272 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVR 331
IF+NQ+R KIGV +GNPE T+GG ALKF++SVRL+IR IK GD+ +G VRV+
Sbjct: 195 CCIFINQLREKIGVMFGNPETTTGGNALKFYSSVRLDIRRVASIKD--GDDVIGNHVRVK 252
Query: 332 VQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKA 391
V K+KV+ P+++ EF+I+FGEG+SK+G +LD +I+ + G+W+SYG +L QGRD
Sbjct: 253 VAKNKVAPPFRKVEFDILFGEGISKVGEILDLGVEYNIIQKSGSWFSYGGTKLAQGRDAT 312
Query: 392 LQYLRDNPLLQEEIEKVVRSMMS 414
L+DNP L EEI ++ ++
Sbjct: 313 KTMLKDNPELTEEITALIHQAIT 335
>gi|329939950|ref|ZP_08289232.1| recombinase A [Streptomyces griseoaurantiacus M045]
gi|329300776|gb|EGG44672.1| recombinase A [Streptomyces griseoaurantiacus M045]
Length = 376
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 243/329 (73%), Gaps = 5/329 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR++ALDAA+ I FGKG+V R+G +E P+G LD+ALG GGLP+GR+VEI
Sbjct: 8 DREKALDAALAQIERQFGKGAVMRMGDRTNEPIEVIPTGSTALDVALGVGGLPRGRVVEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG VDAEHA DP Y+K LGVD++NLI+ QPDNGE
Sbjct: 68 YGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+DLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ ++
Sbjct: 128 ALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQ 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
+ T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVR++IR +I+++K G + VG R
Sbjct: 188 SKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRIDIR---RIETLKDGTDAVGNR 244
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R +V K+KV+ P+KQAEF+I++G G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 245 TRCKVVKNKVAPPFKQAEFDILYGHGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 304
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDG 416
++ A +L+DNP L EIE+ ++ + G
Sbjct: 305 KENARNFLKDNPDLANEIERKIKEKLGVG 333
>gi|390565874|ref|ZP_10246452.1| Recombinase A (recA) [Nitrolancetus hollandicus Lb]
gi|390170888|emb|CCF85791.1| Recombinase A (recA) [Nitrolancetus hollandicus Lb]
Length = 344
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
+R++A+D A+ I FG+GS+ R+G L +ET P+G + LDLALG GG+P+GRI E
Sbjct: 3 EREKAIDLAIAQIERQFGRGSIMRMGEDATRLQIETIPTGSIALDLALGVGGIPRGRITE 62
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLA H IAE QKLGG A VDAEHAFDP Y++ GV+++ L++ QPD GE
Sbjct: 63 IYGPESSGKTTLAQHIIAEAQKLGGVAAYVDAEHAFDPIYAERCGVNLDELLISQPDTGE 122
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ + RSGAID++ +DSV+AL PRAEI+G++G +GLQARLMSQALRK++G S
Sbjct: 123 QALEIAETLVRSGAIDVVVIDSVAALVPRAEIDGDMGDSHVGLQARLMSQALRKLTGAIS 182
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR IK +G + +G+R
Sbjct: 183 RSRTAVIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIRRAEAIK--QGQDSIGIR 240
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P++QAEF+I++ EG+S +G +LD A + +V + GAWY D+RLGQG
Sbjct: 241 ARVKVVKNKVAPPFRQAEFDIMYNEGISAVGSVLDVATDLGLVRKSGAWYYLEDERLGQG 300
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A ++LR NP + +EIE +R+
Sbjct: 301 RENAKEFLRVNPDVMQEIEGRIRA 324
>gi|398801684|ref|ZP_10560922.1| protein RecA [Pantoea sp. GM01]
gi|398091368|gb|EJL81813.1| protein RecA [Pantoea sp. GM01]
Length = 356
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 240/328 (73%), Gaps = 3/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++Q+AL AA+ I FGKGS+ RLG VET +G L+LD+ALG GGLP GRIVEI
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL L IA Q+ G +DAEHA DP Y+K LGVD++NL+ QPD GE
Sbjct: 66 YGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D+I VDSV+ALTP+AEIEGEIG +GL AR+MSQA+RK++GN +
Sbjct: 126 ALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ LIF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G IK +GDE VG
Sbjct: 186 SNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIK--EGDEVVGSET 243
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+I++GEG++ G ++D +V + GAWYSY +++GQG+
Sbjct: 244 RVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLVEKAGAWYSYNGEKIGQGK 303
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDG 416
+ +L++NP + EI+K +R ++ G
Sbjct: 304 ANSTNFLKENPAIANEIDKKLRDLLLSG 331
>gi|259419113|ref|ZP_05743030.1| protein RecA [Silicibacter sp. TrichCH4B]
gi|259345335|gb|EEW57189.1| protein RecA [Silicibacter sp. TrichCH4B]
Length = 357
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 248/330 (75%), Gaps = 6/330 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL--VETFPSGCLTLDLALG-GGLP 141
D + D+Q+ALD+A+ I FGKGS+ +LG G AL +E +G L LD+ALG GGLP
Sbjct: 10 DKKSGDKQKALDSALAQIERQFGKGSIMKLGD-GTALQEIEASSTGSLGLDIALGIGGLP 68
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
GRIVEI+GPESSGKTTL LH IAE QK GG VDAEHA DP Y+K LGVD++ L++
Sbjct: 69 MGRIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLIS 128
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPD GE ALEI D + RSGA++++ VDSV+ALTP++E+EG++G +G+QARLMSQA+RK
Sbjct: 129 QPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMRK 188
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
++G+ S++ C +IF+NQIR KIGV +G+PE T+GG ALKF++SVRL+IR G IK D
Sbjct: 189 LTGSISRSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGSIKDR--D 246
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E VG RV+V K+KV+ P+KQ EF+I++GEG+SK+G +LD +V + GAW+SYGD
Sbjct: 247 EVVGNATRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVAAGVVNKSGAWFSYGD 306
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+R+GQGR+ A YLR+N + EIE +R+
Sbjct: 307 ERIGQGRENAKTYLRENSRIALEIEDKIRA 336
>gi|374852275|dbj|BAL55212.1| recombination protein RecA [uncultured prokaryote]
Length = 354
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/335 (56%), Positives = 254/335 (75%), Gaps = 6/335 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+DRQ+AL+ A++ I +FGKG++ R+G L V+ P+G + LDLALG GG+P+GRI
Sbjct: 1 MDRQKALELAISQIERTFGKGAIMRMGEDASKLQVDVIPTGAIALDLALGVGGIPRGRIT 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH IA+ QK+GG A +DAEHAFDP Y++ LGVD++NL++ QPD G
Sbjct: 61 EIFGPESSGKTTLALHVIAQAQKMGGIAAYIDAEHAFDPVYAERLGVDLDNLLISQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI + + RSGA+D++ +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++G
Sbjct: 121 EQALEITETLVRSGAVDVVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR IK +G+E VG
Sbjct: 181 SRSKTAVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRKVDAIK--EGNETVGT 238
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
RVRV+V K+KV+ P++QAEF+I++ EG+S G +LD A + I+ + GAWY G++RLGQ
Sbjct: 239 RVRVKVVKNKVAPPFRQAEFDIMYNEGISVAGNLLDVATDLGIIRKSGAWYYLGEERLGQ 298
Query: 387 GRDKALQYLRDNPLLQEEIEKVVRSMMSD--GSVH 419
GR+ A +L+ NP L EIE+ +R + G +H
Sbjct: 299 GRENAKAFLKANPDLMREIEQRIRQAAPELRGRIH 333
>gi|56459851|ref|YP_155132.1| recombinase A [Idiomarina loihiensis L2TR]
gi|76363333|sp|Q5QUB8.1|RECA_IDILO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56178861|gb|AAV81583.1| RecA recombinase [Idiomarina loihiensis L2TR]
Length = 372
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 244/325 (75%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DRQ+ALDAA+ I FGKGS+ RLG +++ +G L LD+ALG GGLP GR+VEI
Sbjct: 4 DRQKALDAALGQIERQFGKGSIMRLGDNQTLDIDSVSTGSLGLDIALGIGGLPFGRVVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L IAE QK+G VDAEHA DP Y++ALGV+V++L++ QPD GE
Sbjct: 64 YGPESSGKTTMTLEVIAEAQKMGKTCAFVDAEHALDPIYAEALGVNVDDLLISQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGA+D++ VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++ N K
Sbjct: 124 ALEICDMLVRSGAVDIVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ IF+NQIR KIGV +GNPE T+GG ALKF++SVRL+IR TG +K +GDE VG
Sbjct: 184 SNTMCIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGALK--EGDEVVGNET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+K+A F+I++G+G+SK G ++D +V + GAWYSY ++GQG+
Sbjct: 242 RVKVVKNKVAPPFKEAHFQILYGKGISKEGELIDLGVKHKMVDKAGAWYSYNGDKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
++++L+DNP + +E+E +R ++
Sbjct: 302 ANSMKFLQDNPKIADELEGRIRELL 326
>gi|85818440|gb|EAQ39600.1| protein RecA [Dokdonia donghaensis MED134]
Length = 335
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/324 (54%), Positives = 246/324 (75%), Gaps = 2/324 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+ +AL ++ ++ ++GKG+V ++G VE+ P+G L LD+ALG GG P+GR++EI+
Sbjct: 8 KLKALKLTLDKLDKTYGKGAVMKMGDQAIVDVESIPTGSLGLDVALGVGGYPRGRVIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ L VD++NLI+ QPDNGE A
Sbjct: 68 GPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAEKLDVDIDNLIISQPDNGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G+ SK
Sbjct: 128 LEIADNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGSISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+IF+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK + +G + R
Sbjct: 188 NCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKDSNANV-MGNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V++ K+KV+ P++ AEF+I++GEGVSK+G ++D +I+ + G+W+SY D +LGQGRD
Sbjct: 247 VKIVKNKVAPPFRMAEFDIMYGEGVSKVGEIIDIGVNYEIIKKAGSWFSYQDTKLGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMM 413
L DNP L EE+E + + +
Sbjct: 307 AVKALLLDNPDLMEELETKIHAAI 330
>gi|297588433|ref|ZP_06947076.1| recombination protein A [Finegoldia magna ATCC 53516]
gi|297573806|gb|EFH92527.1| recombination protein A [Finegoldia magna ATCC 53516]
Length = 363
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/317 (55%), Positives = 239/317 (75%), Gaps = 3/317 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL A I FGKGS+ +LG +E P+G + LD+ALG GGLP+GR++EI
Sbjct: 8 EKDQALREAFASIEKQFGKGSIMKLGDHVQKDIEAIPTGAINLDVALGIGGLPRGRVIEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLALH +AE QK+GG A +DAEHA D Y+K LGVD +NLI+ QPD GE
Sbjct: 68 YGPESSGKTTLALHVVAEAQKMGGTAAFIDAEHALDAIYAKNLGVDTDNLIISQPDTGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
AL I D + RS A+D+I +DSV+AL PRAEIEG +G +GLQARLMSQALRK++G SK
Sbjct: 128 ALGICDSLVRSSAVDIIIIDSVAALVPRAEIEGNMGDSHVGLQARLMSQALRKLTGVISK 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ CT+IF+NQ+R K+G+ +GNPEVT+GG ALKF++SVR+EIR I+ KGD+ VG R
Sbjct: 188 SNCTVIFINQLREKVGIMFGNPEVTTGGRALKFYSSVRIEIRRGEAIR--KGDDIVGNRT 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V++ K+KV+ P+KQ EF+I++GEG+SK+G +LD A +V + GAWYSY +++LGQGR
Sbjct: 246 KVKIVKNKVAPPFKQVEFDIMYGEGISKIGTILDLATDCKVVKKAGAWYSYEEEKLGQGR 305
Query: 389 DKALQYLRDNPLLQEEI 405
+ + +L +NP + EEI
Sbjct: 306 ENSKLFLEENPKILEEI 322
>gi|124008321|ref|ZP_01693016.1| RecA protein [Microscilla marina ATCC 23134]
gi|123986110|gb|EAY25946.1| RecA protein [Microscilla marina ATCC 23134]
Length = 359
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/326 (53%), Positives = 245/326 (75%), Gaps = 2/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL + ++ ++GKG+V RL VE P+G L LD+ALG GG+P+GR++EI
Sbjct: 8 EKLKALQMTLEKLDKAYGKGTVMRLSDEKVVEVEVIPTGSLGLDIALGVGGIPRGRVIEI 67
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTLA+H IAE QKLGG A VDAEHAFD +Y++ LG++ ENL++ QPDNGE
Sbjct: 68 YGPESSGKTTLAMHCIAEAQKLGGIAAFVDAEHAFDKTYAEKLGINTENLLISQPDNGEQ 127
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ + RSGAIDL+ +DSV+AL P+AEIEGE+G ++GLQARLMSQALRK++G +K
Sbjct: 128 ALEIAEHLIRSGAIDLMVIDSVAALVPKAEIEGEMGDSKMGLQARLMSQALRKLTGTINK 187
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
C+ IF+NQ+R KIGV +GNPE T+GG ALKF+AS+R++IR G+IK D G R
Sbjct: 188 TSCSCIFINQLREKIGVMFGNPETTTGGNALKFYASIRMDIRRIGQIKE-SADNITGNRT 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+KV+ P+K EF+I++G+G+SK+G +LD +DI+ + G+W+SY +L QGR
Sbjct: 247 RVKVVKNKVAPPFKVVEFDIMYGQGISKVGEILDLGVELDIIKKSGSWFSYKGSKLDQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
DK + DNP L EE+E +R+ ++
Sbjct: 307 DKVKALISDNPDLFEELEIAIRAKIN 332
>gi|58039956|ref|YP_191920.1| recombinase A [Gluconobacter oxydans 621H]
gi|61252238|sp|P48289.2|RECA_GLUOX RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|58002370|gb|AAW61264.1| RecA protein [Gluconobacter oxydans 621H]
Length = 345
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/324 (53%), Positives = 245/324 (75%), Gaps = 3/324 (0%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVE 147
+D+ +AL+ A++ I +FGKGS+ R+G +G + LD+ALG GG+P+GRIVE
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRMGQRPKVETNVISTGSIGLDIALGIGGMPRGRIVE 60
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
I+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV++++L++ QPD GE
Sbjct: 61 IYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDDLLLSQPDAGE 120
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIAD + RSGA+D++ VDSV+AL PRAE+EG++G +GL ARLMSQALRK++G S
Sbjct: 121 QALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVS 180
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
++ +IFLNQIR KIGV +GNPE T+GG ALKF++S+RL+IR G IK DE VG +
Sbjct: 181 RSNTLVIFLNQIRMKIGVMFGNPETTTGGNALKFYSSIRLDIRRIGSIKD--KDEVVGNQ 238
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+K++ P++Q EF+I++GEG+SK+G +LD +IV + GAW+S+ QR+GQG
Sbjct: 239 TRVKVVKNKMAPPFRQVEFDIMYGEGISKMGELLDLGVKGNIVEKSGAWFSFDSQRIGQG 298
Query: 388 RDKALQYLRDNPLLQEEIEKVVRS 411
R+ A Q+LR++P + EIE+ +R+
Sbjct: 299 RENAKQFLREHPEMASEIERRIRA 322
>gi|47678152|emb|CAF21839.1| RecA recombinase [Enterococcus ratti]
Length = 346
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I ++GKGS+ +LG V T PSG L LD+ALG GG P+GRI+E+
Sbjct: 4 DRKAALDAALKKIEKNYGKGSIMKLGEKIDQQVSTIPSGSLALDVALGVGGYPRGRIIEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAIAEVQKNGGTAAFIDAEHALDPQYAQKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGAID++ VDSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG+ +K
Sbjct: 124 GLEIADALVSSGAIDIVVVDSVAALVPRAEIDGEMGDSHVGLQARLMSQALRKLSGSINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
IF+NQIR K+GV +GNPEVT GG ALKF+A++RLE+R ++K +G + VG R
Sbjct: 184 TKTIAIFINQIREKVGVMFGNPEVTPGGRALKFYATIRLEVRRAEQLK--QGTDIVGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE ++++G+G+S+ G +LD A DIV + GAWYSY ++R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKIAEVDVMYGQGISQEGELLDMAVEKDIVDKSGAWYSYKEERIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRS 411
+ A Y+ ++P + EI +VR+
Sbjct: 302 ENAKIYMANHPEMMAEISTLVRA 324
>gi|3219852|sp|P95469.1|RECA_PARDE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|1825468|gb|AAB51561.1| recA [Paracoccus denitrificans]
Length = 356
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/332 (54%), Positives = 245/332 (73%), Gaps = 4/332 (1%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGG-ALVETFPSGCLTLDLALG-GG 139
D D R D+Q+ALD+A+ I FGKGS+ +LG+ A +E +G L LD+ALG GG
Sbjct: 8 DMNDKRSADKQKALDSALAQIERQFGKGSIMKLGADNPVAEIEATSTGSLGLDIALGIGG 67
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
LPKGRI+EIFGPESSGKTTL LH +AE QK GG VDAEHA DP Y+K LGV+++ L+
Sbjct: 68 LPKGRIIEIFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELL 127
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
+ QPD GE ALEI D + SGA+ L+ VDSV+ALTP++EIEG++G Q+G QARLMSQA+
Sbjct: 128 ISQPDTGEQALEIVDTLVASGAVSLVVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAM 187
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK++ + ++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK
Sbjct: 188 RKLTASIGRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRAGSIKDR- 246
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
DE G RV+V K+KV+ P++Q EF+I++GEG+SK+G ++D +V + G+WYSY
Sbjct: 247 -DEVTGNATRVKVVKNKVAPPFRQVEFDIMYGEGISKVGELIDLGIKAGVVEKSGSWYSY 305
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
GD+R+GQGR+ A Q+LRD+P + IE +R+
Sbjct: 306 GDERIGQGRENAKQFLRDHPDMAHAIEDKIRA 337
>gi|225012500|ref|ZP_03702936.1| recA protein [Flavobacteria bacterium MS024-2A]
gi|225003477|gb|EEG41451.1| recA protein [Flavobacteria bacterium MS024-2A]
Length = 335
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/320 (55%), Positives = 245/320 (76%), Gaps = 2/320 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
+Q+AL ++ ++ ++GKG+V RLG VE+ SG + LD+ALG GG P+GR++EI+
Sbjct: 8 KQKALQLTLDKLDKTYGKGAVMRLGDEAIVEVESISSGSIGLDIALGVGGYPRGRVIEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAE QK GG A +DAEHAFD Y++ LGVDV LI+ QPD+GE A
Sbjct: 68 GPESSGKTTLTLHAIAECQKSGGIAAFIDAEHAFDRFYAEKLGVDVGELIISQPDHGEQA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGAID++ +DSV+ALTP++EIEGE+G ++GL ARLMSQALRK++G+ SK
Sbjct: 128 LEIADNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTGSISKT 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
CT+ F+NQ+R KIGV +GNPE T+GG ALKF+ASVRL+IR + +IK+ + E +G + R
Sbjct: 188 NCTVFFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKNTE-SEVLGNKTR 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ EF+I++GEG+SK+G ++D +I+ + G+W+SYGD ++GQGRD
Sbjct: 247 VKVVKNKVAPPFRTTEFDIMYGEGISKIGEIIDLGVNYEIIKKSGSWFSYGDTKIGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVV 409
L DNP L +E+EK +
Sbjct: 307 AVKTLLEDNPELMDELEKKI 326
>gi|344997750|ref|YP_004800604.1| recA protein [Streptomyces sp. SirexAA-E]
gi|344313376|gb|AEN08064.1| recA protein [Streptomyces sp. SirexAA-E]
Length = 356
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 239/322 (74%), Gaps = 5/322 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D ++ALD A+ I FGKG+V RLG +E P+G LD+ALG GGLP+GR+VE+
Sbjct: 5 DHEKALDTALAQIERKFGKGAVMRLGERPNEPIEVIPTGSTALDVALGVGGLPRGRVVEV 64
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTTL LHA+A QK GG+ VDAEHA DP Y+K LGVD +NLI+ QPDNGE
Sbjct: 65 YGPESSGKTTLTLHAVANAQKAGGSVAFVDAEHALDPEYAKKLGVDTDNLILSQPDNGEQ 124
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI D + RSGAIDLI +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++ S+
Sbjct: 125 ALEIVDILIRSGAIDLIVIDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKITSALSQ 184
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
T IF+NQ+R KIGV +G+PE T+GG ALKF+ASVRL+IR +I+++K G + VG R
Sbjct: 185 TRTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIR---RIETLKDGIDAVGNR 241
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+I++G+G+S+ G ++D V + GAWY+Y +LGQG
Sbjct: 242 TRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQG 301
Query: 388 RDKALQYLRDNPLLQEEIEKVV 409
++ A +L+DNP L EIEK +
Sbjct: 302 KENARNFLKDNPDLANEIEKKI 323
>gi|331091027|ref|ZP_08339869.1| recA [Lachnospiraceae bacterium 2_1_46FAA]
gi|330405249|gb|EGG84785.1| recA [Lachnospiraceae bacterium 2_1_46FAA]
Length = 340
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/323 (53%), Positives = 249/323 (77%), Gaps = 4/323 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVE 147
D+ +ALDAA++ + FGKG+V +LG AG + VET P+G L+LD+ALG GG+PKGR++E
Sbjct: 5 DKLKALDAAISKLEKDFGKGTVMKLGDAGANVSVETVPTGSLSLDIALGLGGVPKGRVIE 64
Query: 148 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGE 207
++GPESSGKTT+ LH IAEVQK GG A +DAEHA DP Y+K +GVD++ L + QPD+G+
Sbjct: 65 VYGPESSGKTTVTLHMIAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDELYISQPDSGD 124
Query: 208 MALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNAS 267
ALEIA+ M RSGA+D++ +DSV+AL P+ EIEG++G +GLQARLMSQALRK++ S
Sbjct: 125 QALEIAETMVRSGAMDIVVIDSVAALVPKQEIEGDMGDSHVGLQARLMSQALRKLTPVIS 184
Query: 268 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVR 327
K+ C +IF+NQ+R K+GV +GNPE T+GG ALKF+ASVR+++R +K + E VG R
Sbjct: 185 KSNCVVIFINQLREKVGVMFGNPETTTGGRALKFYASVRMDVRRIETLK--QSGEMVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
R+++ K+K++ P+K+AEF+I+FG+G+SK G +LD A +D+V + G+WY+Y +++GQG
Sbjct: 243 TRIKIVKNKIAPPFKEAEFDIMFGKGISKEGDVLDLATGIDLVNKSGSWYAYNGEKIGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVR 410
R+ A YL +P + EE+E VR
Sbjct: 303 RENAKTYLHTHPEIMEELEAKVR 325
>gi|134098318|ref|YP_001103979.1| DNA recombination/repair protein [Saccharopolyspora erythraea NRRL
2338]
gi|291004262|ref|ZP_06562235.1| DNA recombination/repair [Saccharopolyspora erythraea NRRL 2338]
gi|166220675|sp|A4FAH9.1|RECA_SACEN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|133910941|emb|CAM01054.1| DNA recombination/repair [Saccharopolyspora erythraea NRRL 2338]
Length = 346
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 250/330 (75%), Gaps = 5/330 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +AL+ A+ I+ +GKGSV RLG A +E P+G ++LD+ALG GGLP+GRIVE+
Sbjct: 6 DKGKALELALAQIDKQYGKGSVMRLGDETRAPIEVIPTGSISLDVALGIGGLPRGRIVEV 65
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKT++ALHA+A QKLGG A +DAEHA DP Y+KA+GVD ++L+V QPD GE
Sbjct: 66 YGPESSGKTSVALHAVANAQKLGGTAAFIDAEHALDPEYAKAIGVDTDSLLVSQPDTGEQ 125
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGA+D+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++
Sbjct: 126 ALEIADMLIRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTSALYN 185
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVGVR 327
A T IF+NQ+R K+GV +G+PE T+GG ALKF++SVRL++R +I+++K G + VG R
Sbjct: 186 AKTTAIFINQLREKVGVMFGSPETTTGGKALKFYSSVRLDVR---RIETLKDGSDAVGNR 242
Query: 328 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQG 387
RV+V K+KV+ P+KQAEF+II+G G+S+ G ++D I+ + GAWY+Y +LGQG
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDIIYGIGISREGSLIDMGVEQGIIRKSGAWYTYEGDQLGQG 302
Query: 388 RDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
++ A +++R+NP + EIEK ++ + G+
Sbjct: 303 KENARKFMRENPDVANEIEKRIKEKLGIGA 332
>gi|366162642|ref|ZP_09462397.1| recombinase A [Acetivibrio cellulolyticus CD2]
Length = 350
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 251/325 (77%), Gaps = 5/325 (1%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++++AL+ A+ I FGKG+V +LG VET P+G + LD+ALG GG+P+GRIV
Sbjct: 1 MIEKKKALEMALGQIEKQFGKGAVMKLGENTHMNVETIPTGAMGLDIALGVGGVPRGRIV 60
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
E+FGPESSGKTT+ALH IAE QK GG A +DAEHA DP Y+K LGV+++NLIV QPD G
Sbjct: 61 EVFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVNIDNLIVSQPDTG 120
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGAID+I +DSV+AL P+AEI+GE+G IGLQARLMSQALRK+SG
Sbjct: 121 EQALEIAEALVRSGAIDVIVIDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLSGVI 180
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK-GDEDVG 325
SK+ T IF+NQ+R K+G+ +GNPE T GG ALKF+ASVRL++R +I+S+K G E +G
Sbjct: 181 SKSKTTAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVR---RIESIKQGTEVIG 237
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
R +V+V K+KV+ P+K+AEF+II+G+G+SK G +LD A +DIV + GAW++Y +Q++G
Sbjct: 238 NRTKVKVVKNKVAPPFKEAEFDIIYGKGISKEGSILDVAVSLDIVNKSGAWFAYNNQKIG 297
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVR 410
QGR+ A Q+L +N + EI+ +R
Sbjct: 298 QGRENAKQFLMENTAIMSEIDAKIR 322
>gi|414174616|ref|ZP_11429020.1| protein recA [Afipia broomeae ATCC 49717]
gi|410888445|gb|EKS36248.1| protein recA [Afipia broomeae ATCC 49717]
Length = 362
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 245/324 (75%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +AL AA++ I FGKGSV +LG ++ +E PSG L LD+ALG GGLPKGR+V
Sbjct: 14 MDKTKALSAALSQIERQFGKGSVMKLGKNDRSMDIEVIPSGSLGLDIALGVGGLPKGRVV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH +AE QK GG +DAEHA DP Y++ LGV+V+ L++ QPD+G
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIAD + RSGA+D++ VDSV+AL PRAE+EGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
+K+ +IF+NQIR KIGV YG+PE T+GG ALKF+ASVRL+IR G+IK + DE VG
Sbjct: 194 NKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGQIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD IV + GAW+SY QRLGQ
Sbjct: 252 STRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ + +L+ NP + +IE +R
Sbjct: 312 GRENSKAFLKANPEITAKIEASIR 335
>gi|168334460|ref|ZP_02692631.1| RecA protein (recombinase A) [Epulopiscium sp. 'N.t. morphotype B']
Length = 367
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/322 (54%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D +A++ A++ I FGKGS+ +LG + ++TF +G ++LD+ALG GG+P GRIVE+
Sbjct: 4 DALKAVEEAVSKIEKKFGKGSIMKLGDSINTKIKTFSTGAISLDIALGAGGIPIGRIVEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
FGPESSGKTTL LH IAEVQK GG A +DAEHA DP Y++ LGV++ +L V QPDNGE
Sbjct: 64 FGPESSGKTTLTLHMIAEVQKSGGIAAFIDAEHALDPEYAQRLGVNISDLYVSQPDNGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIA+ M S AI+L+ +DSV+AL PRAEI+G +G +GLQARLMSQALRK++G +K
Sbjct: 124 ALEIAETMVHSQAINLVVIDSVAALVPRAEIDGNMGDSHVGLQARLMSQALRKLTGLVNK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ CT+IF+NQ+R K+GV +GNPE T GG ALKF++SVRL+IR IK+ E +G +
Sbjct: 184 SNCTVIFINQLREKVGVIFGNPETTPGGRALKFYSSVRLDIRKAETIKNAT--EIIGSKT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV+V K+K++ P+KQAEF+II+GEG+S +G +LD A +DIV + GAWYSY ++GQGR
Sbjct: 242 RVKVVKNKIAPPFKQAEFDIIYGEGISSIGDILDTAVNIDIVAKGGAWYSYNGTKIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
+ A ++L++N + EI+ VR
Sbjct: 302 ENAKKFLQENQSILNEIDTAVR 323
>gi|315122763|ref|YP_004063252.1| recombinase A [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496165|gb|ADR52764.1| recombinase A [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 348
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/325 (57%), Positives = 245/325 (75%), Gaps = 5/325 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL--VETFPSGCLTLDLALG-GGLPKGRI 145
+D+ +ALDAA++ I +GKGS+ +LGS VE SG L LD+ALG GG PKGRI
Sbjct: 1 MDKSKALDAALSQIERLYGKGSIMQLGSQSSISEGVEVVSSGSLGLDIALGIGGFPKGRI 60
Query: 146 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205
VEI+GPESSGKTTLALHAIA+ QK GG VDAEHA D Y++ LGVD++NL++ QPD
Sbjct: 61 VEIYGPESSGKTTLALHAIAQSQKAGGTCAFVDAEHALDSVYARKLGVDLKNLLISQPDT 120
Query: 206 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265
GE ALEI D + RSGA+D+I VDSV+ALTPRAEIEG++G GLQARLMSQALRK++G+
Sbjct: 121 GEQALEITDMLVRSGAVDIIVVDSVAALTPRAEIEGDMGESLPGLQARLMSQALRKLTGS 180
Query: 266 ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325
S++ C LIF+NQIR KIGV +G+PE T+GG ALKF+AS+RL+IR G IK + D VG
Sbjct: 181 ISRSNCILIFINQIRMKIGVMFGSPETTTGGNALKFYASIRLDIRRIGAIK--EKDAIVG 238
Query: 326 VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385
+ RV+V K+K++ P+KQ EF+I++GEG+S++G ++D IV + GAW+SY QRLG
Sbjct: 239 NQTRVKVVKNKMASPFKQVEFDIMYGEGISRVGELIDLGVKASIVDKSGAWFSYKGQRLG 298
Query: 386 QGRDKALQYLRDNPLLQEEIEKVVR 410
QGR+ A +LRDN + +I+ ++R
Sbjct: 299 QGRENAKVFLRDNVEVASDIDNLLR 323
>gi|47678154|emb|CAF21840.1| RecA recombinase [Enterococcus saccharolyticus ATCC 43076]
Length = 346
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/329 (53%), Positives = 241/329 (73%), Gaps = 3/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
DR+ ALDAA+ I +FGKG+V +LG + T PSG L LD+ALG GG P+GRIVE+
Sbjct: 4 DRKAALDAALKKIEKNFGKGAVMKLGEKADQRISTIPSGSLALDVALGVGGFPRGRIVEV 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALHA+AEVQK GG A +DAEHA DP Y++ LGV+++ L++ QPD GE
Sbjct: 64 YGPESSGKTTVALHAVAEVQKQGGTAAFIDAEHALDPQYAEKLGVNIDELLLSQPDTGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
LEIAD + SGA+D++ +DSV+AL PRAEI+GE+G +GLQARLMSQALRK+SG +K
Sbjct: 124 GLEIADALVSSGAVDIVVIDSVAALVPRAEIDGEMGDAHVGLQARLMSQALRKLSGTINK 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+F+NQIR K+GV +GNPE T GG ALKF+A+VRLE+R ++KS G + +G R
Sbjct: 184 TKTIALFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQLKS--GTDIIGNRT 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+++V K+KV+ P+K AE +I++GEG+S++G +LD A DI+ + GAWYSY R+GQGR
Sbjct: 242 KIKVVKNKVAPPFKVAEVDIMYGEGISQVGELLDMAAEKDIIDKSGAWYSYKGDRIGQGR 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ Y++D+P + E+ VR G+
Sbjct: 302 ENVKNYMKDHPEMVAEVSARVRDAYGIGT 330
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,406,211,377
Number of Sequences: 23463169
Number of extensions: 258675378
Number of successful extensions: 926090
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9901
Number of HSP's successfully gapped in prelim test: 2047
Number of HSP's that attempted gapping in prelim test: 901051
Number of HSP's gapped (non-prelim): 12530
length of query: 440
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 294
effective length of database: 8,933,572,693
effective search space: 2626470371742
effective search space used: 2626470371742
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)