BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013567
(440 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39199|RECAC_ARATH DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis
thaliana GN=RECA PE=2 SV=1
Length = 439
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/402 (80%), Positives = 353/402 (87%)
Query: 23 FSPFNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSD 82
F+P + S S L S SR + + AA+K KIS EFD ++NG S
Sbjct: 15 FTPLSPLFPFTPCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSP 74
Query: 83 SGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPK 142
DSRFLDRQ+AL+AAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLDLALGGGLPK
Sbjct: 75 DADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPK 134
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GR+VEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YSKALGVDVENLIVCQ
Sbjct: 135 GRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 194
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PDNGEMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKM
Sbjct: 195 PDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 254
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRS GKIKS KGDE
Sbjct: 255 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDE 314
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
D+G+R RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGC+LDCAE+M++VV+KG+WYSY DQ
Sbjct: 315 DIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQ 374
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFL 424
RLGQGR+KALQ+LR+NP LQ+EIEK VR +M DG VH+ + L
Sbjct: 375 RLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPL 416
>sp|P48293|RECA_SPIPL Protein RecA OS=Spirulina platensis GN=recA PE=3 SV=1
Length = 365
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/329 (61%), Positives = 267/329 (81%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL++ +N I SFGKGS+ RLG + VET SG LTLDLALGGGLP+GR++EI+
Sbjct: 9 EKQKALNSVLNQIEKSFGKGSIVRLGDSARMKVETISSGALTLDLALGGGLPRGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE+QK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 69 GPESSGKTTLALHAIAEIQKTGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 129 LEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR T +K KG ++ G+R +
Sbjct: 189 GCTVIFLNQLRQKIGIVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KGSDEYGIRAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE ++ RKGAWYSY ++ +GQGRD
Sbjct: 247 VKVAKNKVAPPFRIAEFDIIFGQGISTIGCLIDLAEETGVIKRKGAWYSYNNENIGQGRD 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
+ + Y+++NP EEI+K VR+ ++ G+V
Sbjct: 307 RTITYMQENPAFTEEIDKRVRAALAGGAV 335
>sp|B7JZS9|RECA_CYAP8 Protein RecA OS=Cyanothece sp. (strain PCC 8801) GN=recA PE=3 SV=1
Length = 349
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/346 (60%), Positives = 270/346 (78%), Gaps = 6/346 (1%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL +N I +FGKGS+ RLG A VET SG LTLDLALGGGLP+GRI+EI+
Sbjct: 9 DKEKALGLVLNQIERNFGKGSIMRLGDAARMRVETISSGSLTLDLALGGGLPQGRIIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD++NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPNYSNALGVDIDNLLVAQPDTGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE D+V RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISRMGCMLDLAEQTDVVNRKGAWYSYNGENISQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 434
D A++YL DNP + + IE+ VR + GS++ F + + N+EE
Sbjct: 307 DNAVKYLEDNPEVADTIERQVREKLELGSLN---FAISQTDDNEEE 349
>sp|Q8DH70|RECA_THEEB Protein RecA OS=Thermosynechococcus elongatus (strain BP-1) GN=recA
PE=3 SV=1
Length = 355
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/321 (62%), Positives = 256/321 (79%), Gaps = 2/321 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL+ A++ I SFGKGS+ RLG A VET SG LTLDLALGGGLPKGRI+EI+
Sbjct: 12 EKRKALEFAISQIERSFGKGSIMRLGDATSMKVETISSGALTLDLALGGGLPKGRIIEIY 71
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+Y+ AL VD++NL+V QPD GE A
Sbjct: 72 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYAAALRVDIQNLLVAQPDTGEAA 131
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D+I VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN SK
Sbjct: 132 LEIVDQLVRSTAVDIIVVDSVAALVPRAEIEGDMGESHVGLQARLMSQALRKINGNISKT 191
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG+ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 192 GCTVIFLNQLRQKIGLTYGNPETTTGGVALKFYASVRLDIRRVQTLK--KGTEEFGIRAK 249
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G++ LGC+LD AE + ++ RKGAWYSY + L QGRD
Sbjct: 250 VKVAKNKVAPPFRIAEFDIIFGKGIANLGCILDMAEEVGVITRKGAWYSYNGENLAQGRD 309
Query: 390 KALQYLRDNPLLQEEIEKVVR 410
+ Y+ +NP +EIE+ VR
Sbjct: 310 NTINYMEENPSFAQEIEQQVR 330
>sp|B1WW59|RECA_CYAA5 Protein RecA OS=Cyanothece sp. (strain ATCC 51142) GN=recA PE=3
SV=1
Length = 349
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL +N I +FGKGS+ RLG A VET +G LTLDLALGGGLP GR+VEI+
Sbjct: 9 DKEKALGLVLNQIERNFGKGSIMRLGDAARMKVETISTGALTLDLALGGGLPMGRVVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS ALGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSAALGVDINNLLVAQPDTGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSAAVDVVVIDSVAALVPRAEIEGEMGDTQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIG+ YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGITYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE D+V+RKGAWYSY + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGQGISRMGCMLDLAEQSDVVLRKGAWYSYNGDNISQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL +NP + E IE+ VR + GS+
Sbjct: 307 DNAVKYLEENPKIAETIEQQVREKLELGSL 336
>sp|Q0ID00|RECA_SYNS3 Protein RecA OS=Synechococcus sp. (strain CC9311) GN=recA PE=3 SV=1
Length = 382
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/342 (59%), Positives = 260/342 (76%), Gaps = 2/342 (0%)
Query: 76 VNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLA 135
V S +GDSR +R +ALD + I +FGKGS+ RLG A VET +G LTLDLA
Sbjct: 5 VKAAQSSAGDSRPGERDKALDLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLA 64
Query: 136 LGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDV 195
LGGG PKGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVD+
Sbjct: 65 LGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDI 124
Query: 196 ENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLM 255
ENL+V QPD GEMALEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARLM
Sbjct: 125 ENLLVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGAQARLM 184
Query: 256 SQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKI 315
SQA+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +
Sbjct: 185 SQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTL 244
Query: 316 KSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGA 375
K +G E+ G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V RKGA
Sbjct: 245 K--RGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCVLDLAEETGVVTRKGA 302
Query: 376 WYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
WYSY +GQGRD + +L NP ++ IE +VR +++GS
Sbjct: 303 WYSYEGDNIGQGRDNTIGWLEQNPEAKDAIEVLVRQKLTEGS 344
>sp|B7KLB5|RECA_CYAP7 Protein RecA OS=Cyanothece sp. (strain PCC 7424) GN=recA PE=3 SV=1
Length = 356
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 260/330 (78%), Gaps = 3/330 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I SFGKGS+ RLG A VET PSG LTLDLALGGGLPKGR++EI+
Sbjct: 9 DKEKALNLVLNQIERSFGKGSIMRLGDAARMRVETIPSGALTLDLALGGGLPKGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAEVQK GG A VDAEHA DP+YS+ LGVD+ NL+V QPD GE A
Sbjct: 69 GPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYSEVLGVDIHNLLVAQPDTGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN K+
Sbjct: 129 LEIVDQLVRSAAVDIVVVDSVAALVPRAEIEGEMGDNQVGLQARLMSKALRKIAGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCVVIFLNQLRQKIGVTYGSPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEYGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCM+D AE D++ RKGAWYSY + + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISQMGCMIDMAEHTDVITRKGAWYSYNGENIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
D A++YL +N + IEK VR + S+
Sbjct: 307 DNAVKYLEENLDVAAIIEKQVREKLDIASL 336
>sp|Q7V547|RECA_PROMM Protein RecA OS=Prochlorococcus marinus (strain MIT 9313) GN=recA
PE=3 SV=1
Length = 379
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 256/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VETFP+G LTLDLALGGG PKGR+VE++
Sbjct: 24 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRVVEVY 83
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +LGVD+ENL+V QPD GEMA
Sbjct: 84 GPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPDTGEMA 143
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 144 LEIVDQLVRSAAVDIVVVDSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 203
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 204 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 261
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGAWYSY +GQGRD
Sbjct: 262 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGRD 321
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L N QE+IE +VR +++GS
Sbjct: 322 NTITWLEQNSEAQEQIEVLVRQKLTEGS 349
>sp|A2CC22|RECA_PROM3 Protein RecA OS=Prochlorococcus marinus (strain MIT 9303) GN=recA
PE=3 SV=1
Length = 379
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 256/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VETFP+G LTLDLALGGG PKGR+VE++
Sbjct: 24 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRVVEVY 83
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +LGVD+ENL+V QPD GEMA
Sbjct: 84 GPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPDTGEMA 143
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 144 LEIVDQLVRSAAVDIVVVDSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 203
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 204 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 261
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGAWYSY +GQGRD
Sbjct: 262 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGRD 321
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L N QE+IE +VR +++GS
Sbjct: 322 NTITWLEQNSEAQEQIEVLVRQKLTEGS 349
>sp|Q111E0|RECA_TRIEI Protein RecA OS=Trichodesmium erythraeum (strain IMS101) GN=recA
PE=3 SV=1
Length = 360
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/329 (60%), Positives = 256/329 (77%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+ALD+ + I +FGKGS+ RLG A VET SG LTLDLALGGGLPKGR++EI+
Sbjct: 9 EKQKALDSVLKTIEKTFGKGSIVRLGDATRMKVETISSGALTLDLALGGGLPKGRVIEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIAE QK GG A VDAEHA DP+Y+ ALGVD+ENL+V QPD GEMA
Sbjct: 69 GPESSGKTTLALHAIAETQKSGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LE+ D + RS A+D++ VDSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+
Sbjct: 129 LEVVDHLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT++FLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR T +K K E+ G+ +
Sbjct: 189 GCTVVFLNQLRQKIGVVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KSSEEYGIHAK 246
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE D++ RKGAWYSY QGR+
Sbjct: 247 VKVAKNKVAPPFRVAEFDIIFGKGISNVGCIIDLAEETDVIKRKGAWYSYQGSNFAQGRE 306
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
KA+ Y+ N ++IEK VR +S G++
Sbjct: 307 KAIAYMESNIDFAKKIEKQVRDHLSQGAL 335
>sp|Q7V9V8|RECA_PROMA Protein RecA OS=Prochlorococcus marinus (strain SARG / CCMP1375 /
SS120) GN=recA PE=3 SV=1
Length = 379
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/333 (60%), Positives = 259/333 (77%), Gaps = 2/333 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144
++R +R +AL + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR
Sbjct: 19 EARSGERDKALSLVLGQIERNFGKGSIMRLGDASKMRVETISTGALTLDLALGGGYPKGR 78
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVD+ENL+V QPD
Sbjct: 79 VVEVYGPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPD 138
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GEMALEI D++ RS A+DL+ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++G
Sbjct: 139 TGEMALEIVDQLIRSSAVDLVVVDSVAALTPRSEIEGEMGDHAVGSQARLMSQAMRKITG 198
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
N K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+
Sbjct: 199 NIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEY 256
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G+R +V+V K+KV+ P++ AEF+I+FG+G+S LGC+LD AE +IV RKGAWYSY +
Sbjct: 257 GIRAKVKVAKNKVAPPFRIAEFDILFGKGISTLGCLLDMAEETNIVTRKGAWYSYEGDNI 316
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
GQGRD + +L +N +E+IEK+VR +++GS
Sbjct: 317 GQGRDNTITWLEENSEAKEKIEKLVRQKLTEGS 349
>sp|A9BCQ0|RECA_PROM4 Protein RecA OS=Prochlorococcus marinus (strain MIT 9211) GN=recA
PE=3 SV=1
Length = 367
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 272/364 (74%), Gaps = 7/364 (1%)
Query: 75 KVNGFSSDSGDSRFL-----DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGC 129
+VN S + +SR +R +AL+ + I +FGKGS+ RLG A VET +G
Sbjct: 4 EVNANQSPNAESRQEAARSGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGA 63
Query: 130 LTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSK 189
LTLDLALGGG PKGR+VE++GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+
Sbjct: 64 LTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAA 123
Query: 190 ALGVDVENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIG 249
+LGVDVENL+V QPD GEMALEI D++ RS A++L+ VDSV+ALTPRAEIEGE+G IG
Sbjct: 124 SLGVDVENLLVSQPDTGEMALEIVDQLIRSAAVELVVVDSVAALTPRAEIEGEMGDHVIG 183
Query: 250 LQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEI 309
QARLMSQA+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+I
Sbjct: 184 SQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDI 243
Query: 310 RSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDI 369
R +K +G ++ G+R +V+V K+KV+ P++ AEF+I+FG+G+S +GC+LD AE +I
Sbjct: 244 RRIQTLK--RGTDEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTIGCLLDLAEETNI 301
Query: 370 VVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSL 429
V RKGAWYSY +GQGRD + +L N +E+IEK+VR +++GS + +R ++
Sbjct: 302 VARKGAWYSYEGDNIGQGRDNTITWLEQNTEAKEKIEKLVRQKLTEGSEVSSNSMRPLTT 361
Query: 430 PNQE 433
N++
Sbjct: 362 ANRK 365
>sp|Q3AMM5|RECA_SYNSC Protein RecA OS=Synechococcus sp. (strain CC9605) GN=recA PE=3 SV=1
Length = 374
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/336 (60%), Positives = 257/336 (76%), Gaps = 2/336 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VEI+
Sbjct: 17 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIY 76
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 77 GPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 136
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 137 LEIVDQLVRSAAVDLVVVDSVAALTPRAEIEGEMGDLAVGAQARLMSQAMRKITGNIGKS 196
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 197 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 254
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +VVRKGAWYSY +GQGRD
Sbjct: 255 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVVRKGAWYSYEGDNIGQGRD 314
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
+ ++ +NP IE +VR +++GS + + +R
Sbjct: 315 NTISWMEENPDATATIETLVRQKLTEGSEVKANSMR 350
>sp|A5GIV0|RECA_SYNPW Protein RecA OS=Synechococcus sp. (strain WH7803) GN=recA PE=3 SV=1
Length = 382
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/343 (58%), Positives = 259/343 (75%), Gaps = 2/343 (0%)
Query: 75 KVNGFSSDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDL 134
+V S GD R +R +AL+ + I +FGKGS+ RLG A VET +G LTLDL
Sbjct: 4 EVKSSQSSGGDVRPGERDQALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDL 63
Query: 135 ALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVD 194
ALGGG PKGR+VE++GPESSGKTTL LHAIAEVQ+ GG A VDAEHA DP Y+ +LGVD
Sbjct: 64 ALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVD 123
Query: 195 VENLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARL 254
+ENL+V QPD GEMALEI D++ RS A+D++ VDSV+ALTPRAEIEGE+G +G QARL
Sbjct: 124 IENLLVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRAEIEGEMGDLAVGSQARL 183
Query: 255 MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGK 314
MSQA+RK++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR
Sbjct: 184 MSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQT 243
Query: 315 IKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKG 374
+K +G E+ G+R +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V RKG
Sbjct: 244 LK--RGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVTRKG 301
Query: 375 AWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 417
AWYSY +GQGRD + +L NP ++ IE +VR +++GS
Sbjct: 302 AWYSYEGDNIGQGRDNTIGWLEQNPEAKDTIETLVRQKLTEGS 344
>sp|P14582|RECA_SYNP2 Protein RecA OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=recA PE=3 SV=1
Length = 348
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/322 (61%), Positives = 256/322 (79%), Gaps = 3/322 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
D+++AL+ +N I +FGKG++ RLG A V T PSG LTLD A+GGG P+GRIVEI+
Sbjct: 9 DKEKALNLVLNQIERNFGKGAIMRLGDAAQMKVATIPSGALTLDQAMGGGFPRGRIVEIY 68
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTT+ALHAIAEVQK GG A +DAEHA DP+YS ALGVD+ENL+V QPDNGE A
Sbjct: 69 GPESSGKTTVALHAIAEVQKAGGVAAFIDAEHALDPTYSAALGVDIENLLVAQPDNGESA 128
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD++ RS A+DLI +DSV+AL PRAEIEGE+G Q+GLQARLMS+ALRK++GN ++
Sbjct: 129 LEIADQLVRSAAVDLIVIDSVAALVPRAEIEGEMGDVQVGLQARLMSKALRKIAGNMGRS 188
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GCT+IFLNQ+R KIG+ YGNPEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 189 GCTVIFLNQLRQKIGISYGNPEVTTGGTALKFYASVRLDIRRIQTLK--KGSEGEFGIRA 246
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GCMLD AE ++ RKGAWYSY + QGR
Sbjct: 247 KVKVAKNKVAPPFRIAEFDIIFGKGISRVGCMLDLAEQTGVITRKGAWYSYEGDNIAQGR 306
Query: 389 DKALQYLRDNPLLQEEIEKVVR 410
D A++YL +NP + + + VR
Sbjct: 307 DNAVKYLEENPDVAAIVTQKVR 328
>sp|Q46IQ5|RECA_PROMT Protein RecA OS=Prochlorococcus marinus (strain NATL2A) GN=recA
PE=3 SV=1
Length = 377
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 262/341 (76%), Gaps = 2/341 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144
D++ ++++AL + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR
Sbjct: 17 DAKSGEKEKALSLVVGQIERNFGKGSIMRLGDASKMRVETISTGALTLDLALGGGYPKGR 76
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
++E++GPESSGKTTL LHAIAE+Q+ GG A VDAEHA DP Y+ +LGVDVENL+V QPD
Sbjct: 77 VIEVYGPESSGKTTLTLHAIAEIQRNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPD 136
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GEMALEI D++ RS A+DL+ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++G
Sbjct: 137 TGEMALEIVDQLIRSAAVDLVVVDSVAALTPRSEIEGEMGDHSVGAQARLMSQAMRKITG 196
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
N K+GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR +K +G E+
Sbjct: 197 NIGKSGCTVIFLNQLRLKIGITYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEY 254
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G+R +V+V K+KV+ P++ AEF+I+FG+G+S LGC+LD A+ ++V RKGAWYSY +
Sbjct: 255 GIRAKVKVAKNKVAPPFRIAEFDILFGKGISTLGCLLDLADETNVVTRKGAWYSYEGDNI 314
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
GQGRD + +L NP +E IEK+V+ +++GS + +R
Sbjct: 315 GQGRDNTITWLEQNPESKEIIEKLVKEKLTEGSEVSANSMR 355
>sp|A2C503|RECA_PROM1 Protein RecA OS=Prochlorococcus marinus (strain NATL1A) GN=recA
PE=3 SV=1
Length = 377
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 262/341 (76%), Gaps = 2/341 (0%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144
D++ ++++AL + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR
Sbjct: 17 DAKSGEKEKALSLVVGQIERNFGKGSIMRLGDASKMRVETISTGALTLDLALGGGYPKGR 76
Query: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204
++E++GPESSGKTTL LHAIAE+Q+ GG A VDAEHA DP Y+ +LGVDVENL+V QPD
Sbjct: 77 VIEVYGPESSGKTTLTLHAIAEIQRNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPD 136
Query: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264
GEMALEI D++ RS A+DL+ VDSV+ALTPR+EIEGE+G +G QARLMSQA+RK++G
Sbjct: 137 TGEMALEIVDQLIRSAAVDLVVVDSVAALTPRSEIEGEMGDHSVGAQARLMSQAMRKITG 196
Query: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDV 324
N K+GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR +K +G E+
Sbjct: 197 NIGKSGCTVIFLNQLRLKIGITYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEY 254
Query: 325 GVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRL 384
G+R +V+V K+KV+ P++ AEF+I+FG+G+S LGC+LD A+ ++V RKGAWYSY +
Sbjct: 255 GIRAKVKVAKNKVAPPFRIAEFDILFGKGISTLGCLLDLADETNVVTRKGAWYSYEGDNI 314
Query: 385 GQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLR 425
GQGRD + +L NP +E IEK+V+ +++GS + +R
Sbjct: 315 GQGRDNTITWLEQNPESKEIIEKLVKEKLTEGSEVSANSMR 355
>sp|Q7U4K5|RECA_SYNPX Protein RecA OS=Synechococcus sp. (strain WH8102) GN=recA PE=3 SV=1
Length = 375
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/328 (60%), Positives = 254/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VEI+
Sbjct: 19 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIY 78
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 79 GPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 138
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+ALTPRAEIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 139 LEIVDQLVRSAAVDIVVIDSVAALTPRAEIEGEMGDLAVGSQARLMSQAMRKITGNIGKS 198
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 199 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 256
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE +V+RKGAWYSY +GQGRD
Sbjct: 257 VKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGRD 316
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ ++ +NP IE++VR +++GS
Sbjct: 317 NTITWMEENPEAAITIEQLVRQKLTEGS 344
>sp|Q7UZU3|RECA_PROMP Protein RecA OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1986 / MED4) GN=recA PE=3 SV=1
Length = 370
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/354 (56%), Positives = 269/354 (75%), Gaps = 4/354 (1%)
Query: 82 DSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLP 141
DS +S ++ +AL+ + I +FG+GS+ RLG A VET +G LTLDLALGGG P
Sbjct: 10 DSKESSSEEKNKALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYP 69
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGR+VE++GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V
Sbjct: 70 KGRVVEVYGPESSGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASLGVDVENLLVS 129
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPD GEMALEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK
Sbjct: 130 QPDTGEMALEIVDQLIRSTAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRK 189
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
++GN K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G
Sbjct: 190 ITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGT 247
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E+ G+R +V+V K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY
Sbjct: 248 EEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEG 307
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEEN 435
+ +GQGRD + +L N ++ ++E +V++ +++G+ + ++ +L N EN
Sbjct: 308 ENIGQGRDNTIIWLDQNLEIKNKVESIVKTKLTEGTEVSSNSMK--ALNNNPEN 359
>sp|Q3AUV9|RECA_SYNS9 Protein RecA OS=Synechococcus sp. (strain CC9902) GN=recA PE=3 SV=1
Length = 376
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 252/328 (76%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
+R +AL+ + I +FGKGS+ RLG A VET +G LTLDLALGGG PKGR+VEI+
Sbjct: 19 ERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETISTGALTLDLALGGGYPKGRVVEIY 78
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 79 GPESSGKTTLTLHAIAEVQKRGGVAAFVDAEHALDPHYAASLGVDVENLLVSQPDTGEMA 138
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+ALTPR+EIEGE+G +G QARLMSQA+RK++GN K+
Sbjct: 139 LEIVDQLVRSAAVDIVVIDSVAALTPRSEIEGEMGDVSVGAQARLMSQAMRKITGNIGKS 198
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G+R +
Sbjct: 199 GCTVIFLNQLRLKIGVMYGNPETTTGGNALKFYASVRLDIRRIQTLK--KGTEEFGIRAK 256
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG G+S +GC+LD AE +VVRKGAWYSY +GQGRD
Sbjct: 257 VKVAKNKVAPPFRIAEFDILFGRGISTVGCLLDLAEETGVVVRKGAWYSYEGDNIGQGRD 316
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ ++ NP IE +VR +++G+
Sbjct: 317 NTIVWMEQNPEAATTIETLVRQKLNEGT 344
>sp|P74737|RECA_SYNY3 Protein RecA OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=recA PE=3 SV=1
Length = 354
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/351 (58%), Positives = 265/351 (75%), Gaps = 12/351 (3%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
DR++AL+AA+ I SFGKG++ RLG A VET +G LTLDLALGGGLPKGRIVEI+
Sbjct: 8 DREKALNAALAQIERSFGKGAIMRLGDATQMRVETISTGALTLDLALGGGLPKGRIVEIY 67
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHA+A Q+ GG A VDAEHA DP YSKALGVD++NL+V QPDNGE A
Sbjct: 68 GPESSGKTTLALHAVAATQQAGGVAAFVDAEHALDPVYSKALGVDIDNLLVAQPDNGESA 127
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D+I VDSV+AL PRAEIEGE+G +G QARLMS+A+RK++GN ++
Sbjct: 128 LEIVDQLVRSTAVDIIVVDSVAALVPRAEIEGEMGDTSVGSQARLMSKAMRKIAGNIGRS 187
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE-DVGVRV 328
GC +IFLNQ+R KIGV YG+PEVT+GG ALKF+ASVRL+IR +K KG E + G+R
Sbjct: 188 GCLVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLK--KGTEGEYGIRA 245
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+KV+ P++ AEF+IIFG+G+S++GC +D AE +++ RKGAWYSY + + QGR
Sbjct: 246 KVKVAKNKVAPPFRIAEFDIIFGQGISRMGCTIDLAEKCEVITRKGAWYSYNGENIAQGR 305
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439
D A++YL +NP + I++ VR +S L N P + E+ EE
Sbjct: 306 DNAMKYLEENPEIAATIDQQVREKLS---------LVNAVFPVETEDGAEE 347
>sp|A3PF51|RECA_PROM0 Protein RecA OS=Prochlorococcus marinus (strain MIT 9301) GN=recA
PE=3 SV=1
Length = 365
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 193/328 (58%), Positives = 255/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++ +AL + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++
Sbjct: 13 EKDKALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVY 72
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 73 GPESSGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 132
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+
Sbjct: 133 LEIVDQLIRSSAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKS 192
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 193 GCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 250
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD
Sbjct: 251 VKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRD 310
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L N ++ ++E +V+ +++G+
Sbjct: 311 NTIIWLDQNLEIRNKVESMVKEKLTEGT 338
>sp|A2BYU0|RECA_PROM5 Protein RecA OS=Prochlorococcus marinus (strain MIT 9515) GN=recA
PE=3 SV=1
Length = 370
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 255/324 (78%), Gaps = 2/324 (0%)
Query: 94 ALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPES 153
AL+ + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++GPES
Sbjct: 22 ALNLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPES 81
Query: 154 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIA 213
SGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMALEI
Sbjct: 82 SGKTTLTLHAIAEVQKNGGIAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIV 141
Query: 214 DRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTL 273
D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+GCT+
Sbjct: 142 DQLIRSTAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTV 201
Query: 274 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQ 333
IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +V+V
Sbjct: 202 IFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAKVKVA 259
Query: 334 KSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQ 393
K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD +
Sbjct: 260 KNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRDNTII 319
Query: 394 YLRDNPLLQEEIEKVVRSMMSDGS 417
+L N +++++E +V+S +++G+
Sbjct: 320 WLDQNLEIKKKVEGIVKSKLTEGT 343
>sp|A8G766|RECA_PROM2 Protein RecA OS=Prochlorococcus marinus (strain MIT 9215) GN=recA
PE=3 SV=1
Length = 365
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/328 (58%), Positives = 255/328 (77%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++ +AL + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++
Sbjct: 13 EKDKALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVY 72
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMA
Sbjct: 73 GPESSGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMA 132
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+
Sbjct: 133 LEIVDQLIRSSAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKS 192
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +
Sbjct: 193 GCTVIFLNQLRLKIGITYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAK 250
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD
Sbjct: 251 VKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRD 310
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L N ++ ++E +++ +++G+
Sbjct: 311 NTIIWLDQNLEIKNKVESMIKEKLTEGT 338
>sp|A2BTE1|RECA_PROMS Protein RecA OS=Prochlorococcus marinus (strain AS9601) GN=recA
PE=3 SV=1
Length = 365
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 252/324 (77%), Gaps = 2/324 (0%)
Query: 94 ALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPES 153
AL + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++GPES
Sbjct: 17 ALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPES 76
Query: 154 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIA 213
SGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMALEI
Sbjct: 77 SGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIV 136
Query: 214 DRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTL 273
D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+GCT+
Sbjct: 137 DQLIRSSAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTV 196
Query: 274 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQ 333
IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +V+V
Sbjct: 197 IFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAKVKVA 254
Query: 334 KSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQ 393
K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD +
Sbjct: 255 KNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRDNTII 314
Query: 394 YLRDNPLLQEEIEKVVRSMMSDGS 417
+L N ++ ++E +V+ +++G+
Sbjct: 315 WLDQNLEIRNKVESMVKEKLTEGT 338
>sp|Q318I0|RECA_PROM9 Protein RecA OS=Prochlorococcus marinus (strain MIT 9312) GN=recA
PE=3 SV=1
Length = 365
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 252/324 (77%), Gaps = 2/324 (0%)
Query: 94 ALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPES 153
AL + I +FG+GS+ RLG A VET +G LTLDLALGGG PKGR+VE++GPES
Sbjct: 17 ALSLVLGQIERNFGRGSIMRLGDASRMKVETISTGALTLDLALGGGYPKGRVVEVYGPES 76
Query: 154 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMALEIA 213
SGKTTL LHAIAEVQK GG A VDAEHA DP Y+ +LGVDVENL+V QPD GEMALEI
Sbjct: 77 SGKTTLTLHAIAEVQKNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIV 136
Query: 214 DRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTL 273
D++ RS A+DL+ VDSV+ALTPRAEIEGE+G IG QARLMSQA+RK++GN K+GCT+
Sbjct: 137 DQLIRSSAVDLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCTV 196
Query: 274 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQ 333
IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K +G E+ G+R +V+V
Sbjct: 197 IFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEYGIRAKVKVA 254
Query: 334 KSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQ 393
K+KV+ P++ AEF+I+FG+G+S GC+LD AE +I++R+GAWYSY + +GQGRD +
Sbjct: 255 KNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRGAWYSYEGENIGQGRDNTII 314
Query: 394 YLRDNPLLQEEIEKVVRSMMSDGS 417
+L N ++ ++E +V+ +++G+
Sbjct: 315 WLDQNLEIRNKVESMVKEKLTEGT 338
>sp|B2IWJ2|RECA_NOSP7 Protein RecA OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=recA PE=3 SV=1
Length = 359
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 258/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET SG LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISSGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHA+AEVQ+ GG A VDAEHA DP+Y+ ALGVD++NL++ QPD GE AL
Sbjct: 70 PESSGKTTVALHALAEVQRNGGIAAFVDAEHALDPTYAAALGVDIDNLLISQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEYGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+G+S LGC++D AE I++RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGISTLGCVVDLAEETGIIIRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P EEI+K+VR + G+V
Sbjct: 308 AIKYLEEKPEFAEEIKKLVREKLDKGAV 335
>sp|P58552|RECA_NOSS1 Protein RecA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=recA
PE=3 SV=1
Length = 357
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/328 (60%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD++NL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASALGVDIQNLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE I++RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILIRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P E+I++ VR + G+V
Sbjct: 308 AIKYLEEKPEFSEQIKQQVREKLDKGAV 335
>sp|Q7NFV8|RECA_GLOVI Protein RecA OS=Gloeobacter violaceus (strain PCC 7421) GN=recA
PE=3 SV=1
Length = 369
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/326 (61%), Positives = 255/326 (78%), Gaps = 2/326 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL + I +FG+G++ RLG VET PSG +TLDLALGGGLP+GR++EI+G
Sbjct: 23 KQKALKMVLTQIKRNFGEGAIMRLGENTRIRVETVPSGAITLDLALGGGLPRGRVIEIYG 82
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTTLALHAIAE+QK GG A VDAEHA DP+Y+K LGV+V++LI+ QPD GEMA+
Sbjct: 83 PESSGKTTLALHAIAEIQKTGGVAAFVDAEHALDPAYAKVLGVNVDDLIISQPDTGEMAM 142
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS AID+I +DSV+AL PRAEIEGE+G +GLQARLMSQALRK++GN K G
Sbjct: 143 EIVDQLVRSAAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKITGNIGKTG 202
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
C +IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG ++ G RVRV
Sbjct: 203 CMVIFLNQLRSKIGVMYGNPETTTGGNALKFYASVRLDIRKAETLK--KGQDEYGNRVRV 260
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P+++AEF+IIFG+G+S LGC+LD A M+IV RKGAWYSYG +RLGQGR+
Sbjct: 261 KVVKNKVAPPFRKAEFDIIFGKGISSLGCILDLAVEMEIVERKGAWYSYGSERLGQGREN 320
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDG 416
L L +N +EIE VR ++ G
Sbjct: 321 VLALLEENAAQAQEIEIKVREKIASG 346
>sp|P14167|RECA_ANAVT Protein RecA OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=recA PE=3 SV=2
Length = 358
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/328 (60%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFG 150
+Q+AL +N I SFGKG++ RLG A VET +G LTLDLALGGGLPKGR++EI+G
Sbjct: 10 KQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYG 69
Query: 151 PESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMAL 210
PESSGKTT+ALHAIAEVQK GG A VDAEHA DP+Y+ ALGVD++NL+V QPD GE AL
Sbjct: 70 PESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASALGVDIQNLLVSQPDTGESAL 129
Query: 211 EIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAG 270
EI D++ RS A+D++ +DSV+AL PRAEIEG++G +GLQARLMSQALRK++GN K+G
Sbjct: 130 EIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSG 189
Query: 271 CTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRV 330
CT+IF+NQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG ++ G RV+V
Sbjct: 190 CTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLK--KGTDEFGNRVKV 247
Query: 331 RVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDK 390
+V K+KV+ P++ AEF+IIFG+GVS LGC++D AE I++RKGAWYSY + QGRD
Sbjct: 248 KVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILLRKGAWYSYNGDNISQGRDN 307
Query: 391 ALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
A++YL + P E+I++ VR + G+V
Sbjct: 308 AIKYLEEKPEFAEQIKQQVREKLDKGAV 335
>sp|B8HR52|RECA_CYAP4 Protein RecA OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141)
GN=recA PE=3 SV=1
Length = 357
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 254/329 (77%), Gaps = 2/329 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++Q+AL+ M I SFGKGS+ RLG A VET P+G L LDLALGGGLP+GR+VEI+
Sbjct: 10 EKQKALNLVMTQIERSFGKGSIMRLGDATRMKVETVPTGALPLDLALGGGLPRGRVVEIY 69
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALHAIA VQ+ GG A VDAEHA DP+Y+ LGVD++NL++ QPD GE A
Sbjct: 70 GPESSGKTTLALHAIAAVQQTGGIAAFVDAEHALDPAYAAVLGVDIQNLLISQPDTGETA 129
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL P+AEIEG++G +GLQARLMSQALRK++GN K
Sbjct: 130 LEIVDQLVRSTAVDVVVIDSVAALVPKAEIEGDMGDAHVGLQARLMSQALRKITGNIGKT 189
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GC +IFLNQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR +K KG E+ G RV+
Sbjct: 190 GCIVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRVQTLK--KGTEEFGNRVK 247
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+IIFG+G+S+LGC+LD AE +V RKGAWYSY + L QGRD
Sbjct: 248 VKVAKNKVAPPFRVAEFDIIFGKGISRLGCILDMAEETGVVNRKGAWYSYNGENLAQGRD 307
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGSV 418
++Y+ +NP IE++VR + G+V
Sbjct: 308 NTIKYMEENPEFARNIEQLVRQKLEMGAV 336
>sp|Q8G4G9|RECA_BIFLO Protein RecA OS=Bifidobacterium longum (strain NCC 2705) GN=recA
PE=3 SV=1
Length = 397
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 252/330 (76%), Gaps = 5/330 (1%)
Query: 85 DSRFLD--RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLP 141
D LD R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLP
Sbjct: 15 DKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLP 74
Query: 142 KGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVC 201
KGRIVEI+GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV
Sbjct: 75 KGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVS 134
Query: 202 QPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRK 261
QPDNGE ALEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK
Sbjct: 135 QPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 194
Query: 262 MSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGD 321
M+G ++AG T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GD
Sbjct: 195 MTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GD 252
Query: 322 EDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGD 381
E VG R RV+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y
Sbjct: 253 EAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEG 312
Query: 382 QRLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
+LGQGR+K Q+L+DNP + EEIE V++
Sbjct: 313 DQLGQGREKVRQFLKDNPAITEEIENKVKA 342
>sp|Q5N2W5|RECA_SYNP6 Protein RecA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=recA PE=3 SV=1
Length = 356
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL+ ++ I +FGKG++ RLG A VET +G LTLDLALGGGLPKGRI+E++
Sbjct: 11 EKEKALNLVLSQIERNFGKGAIMRLGDAARLRVETISTGALTLDLALGGGLPKGRIIEVY 70
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ ++GVD++NL++ QPD GEMA
Sbjct: 71 GPESSGKTTLTLHAIAEVQKQGGIAAFVDAEHALDPVYATSVGVDIDNLLISQPDTGEMA 130
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMSQA+RK++GN K+
Sbjct: 131 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDAQVGLQARLMSQAMRKITGNIGKS 190
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG E+ G R +
Sbjct: 191 GCTVIFLNQLRQKIGVTYGSPETTTGGQALKFYASVRLDIRRIQTLK--KGTEEYGTRAK 248
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S LGC++D AE +++RKGAWYSY +GQGRD
Sbjct: 249 VKVVKNKVAPPFRIAEFDILFGKGISTLGCLVDLAEETGVILRKGAWYSYNGDNIGQGRD 308
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L ++P + +E+ VR ++ G+
Sbjct: 309 NTITHLEEHPDFRATVEQQVREKLALGA 336
>sp|Q31RD9|RECA_SYNE7 Protein RecA OS=Synechococcus elongatus (strain PCC 7942) GN=recA
PE=3 SV=1
Length = 356
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 257/328 (78%), Gaps = 2/328 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIF 149
++++AL+ ++ I +FGKG++ RLG A VET +G LTLDLALGGGLPKGRI+E++
Sbjct: 11 EKEKALNLVLSQIERNFGKGAIMRLGDAARLRVETISTGALTLDLALGGGLPKGRIIEVY 70
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTL LHAIAEVQK GG A VDAEHA DP Y+ ++GVD++NL++ QPD GEMA
Sbjct: 71 GPESSGKTTLTLHAIAEVQKQGGIAAFVDAEHALDPVYATSVGVDIDNLLISQPDTGEMA 130
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEI D++ RS A+D++ +DSV+AL PRAEIEGE+G Q+GLQARLMSQA+RK++GN K+
Sbjct: 131 LEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGEMGDAQVGLQARLMSQAMRKITGNIGKS 190
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
GCT+IFLNQ+R KIGV YG+PE T+GG ALKF+ASVRL+IR +K KG E+ G R +
Sbjct: 191 GCTVIFLNQLRQKIGVTYGSPETTTGGQALKFYASVRLDIRRIQTLK--KGTEEYGTRAK 248
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+KV+ P++ AEF+I+FG+G+S LGC++D AE +++RKGAWYSY +GQGRD
Sbjct: 249 VKVVKNKVAPPFRIAEFDILFGKGISTLGCLVDLAEETGVILRKGAWYSYNGDNIGQGRD 308
Query: 390 KALQYLRDNPLLQEEIEKVVRSMMSDGS 417
+ +L ++P + +E+ VR ++ G+
Sbjct: 309 NTITHLEEHPDFRATVEQQVREKLALGA 336
>sp|Q9S660|RECA_BIFBR Protein RecA OS=Bifidobacterium breve GN=recA PE=3 SV=1
Length = 392
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 249/322 (77%), Gaps = 3/322 (0%)
Query: 91 RQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIF 149
R+ ALD A+ + SFGKGS RLG VE P+G L LD+ALG GGLPKGRIVEI+
Sbjct: 23 RKAALDTALAQVEKSFGKGSAMRLGDQPVQNVEVIPTGSLALDMALGIGGLPKGRIVEIY 82
Query: 150 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEMA 209
GPESSGKTTLALH +A QK GG A +DAEHA DP+Y++ LGVD ++LIV QPDNGE A
Sbjct: 83 GPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQA 142
Query: 210 LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKA 269
LEIAD + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRKM+G ++A
Sbjct: 143 LEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQA 202
Query: 270 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVR 329
G T IF+NQ+R KIGV++GNPE T+GG ALKF+ASVRL+IR +K+ GDE VG R R
Sbjct: 203 GTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRLDIRRIQTLKN--GDEAVGNRTR 260
Query: 330 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRD 389
V+V K+K++ P+K AEF++++GEG+S+ G ++D A+ + +V + G+W++Y +LGQGR+
Sbjct: 261 VKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGRE 320
Query: 390 KALQYLRDNPLLQEEIEKVVRS 411
K Q+L+DNP + EEIE V++
Sbjct: 321 KVRQFLKDNPAITEEIENKVKA 342
>sp|A6X0E8|RECA_OCHA4 Protein RecA OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882
/ NCTC 12168) GN=recA PE=3 SV=1
Length = 361
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET P+G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++ +
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>sp|Q9X5D8|RECA_ZYMMO Protein RecA OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821
/ ZM4 / CP4) GN=recA PE=3 SV=3
Length = 354
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 254/331 (76%), Gaps = 3/331 (0%)
Query: 81 SDSGDSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GG 139
+ SG +D+Q+AL+AA+ I+ +FGKGSV RLGS ++T SG L LD+ALG GG
Sbjct: 8 TTSGKDNNMDKQKALEAALAQIDRAFGKGSVMRLGSREKIEIDTISSGSLGLDIALGIGG 67
Query: 140 LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLI 199
LP+GRIVEI+GPESSGKTTLALHAIAE QK GG A VDAEHA DP Y+K LGV+ ++LI
Sbjct: 68 LPRGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLI 127
Query: 200 VCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 259
V QPD GE ALEI D + RS A+D++ VDSV+ALTPRAEIEGE+G +GLQARLMSQAL
Sbjct: 128 VSQPDTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQAL 187
Query: 260 RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 319
RK++G+ +++ +IF+NQ+R KIGV YGNPE T+GG ALKF+ASVRL+IR G+IK
Sbjct: 188 RKITGSINRSQTLVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRVGQIKDR- 246
Query: 320 GDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSY 379
DE VG RV+V K+K++ P+KQ EF+I++GEGVSK+G +LD I+ + G+W+S+
Sbjct: 247 -DEIVGNATRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIIDKSGSWFSH 305
Query: 380 GDQRLGQGRDKALQYLRDNPLLQEEIEKVVR 410
R+GQGR+ A +LR++P + E+IEK++R
Sbjct: 306 DSVRIGQGRENAKTFLREHPEMTEKIEKMIR 336
>sp|P65976|RECA_BRUSU Protein RecA OS=Brucella suis biovar 1 (strain 1330) GN=recA PE=3
SV=1
Length = 361
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>sp|P65975|RECA_BRUME Protein RecA OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=recA PE=3 SV=1
Length = 361
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>sp|C0RJG9|RECA_BRUMB Protein RecA OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=recA PE=3 SV=1
Length = 361
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>sp|A9M5L8|RECA_BRUC2 Protein RecA OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=recA PE=3 SV=1
Length = 361
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>sp|Q04761|RECA_BRUAB Protein RecA OS=Brucella abortus biovar 1 (strain 9-941) GN=recA
PE=3 SV=2
Length = 361
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>sp|Q2YRU7|RECA_BRUA2 Protein RecA OS=Brucella abortus (strain 2308) GN=recA PE=3 SV=1
Length = 361
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>sp|B2S648|RECA_BRUA1 Protein RecA OS=Brucella abortus (strain S19) GN=recA PE=3 SV=1
Length = 361
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE VG
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVVGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>sp|B0CH00|RECA_BRUSI Protein RecA OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=recA PE=3 SV=1
Length = 361
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 250/324 (77%), Gaps = 4/324 (1%)
Query: 89 LDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIV 146
+D+ +ALDAA++ I +FGKGS+ RLG + +ET +G L+LD+ALG GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EI+GPESSGKTTLALH IAE QK GG VDAEHA DP Y++ LGVD+ENL++ QPD G
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEI D + RSGAID++ VDSV+ALTPRAEIEGE+G GLQARLMSQALRK++G+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
S++ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G IK + DE +G
Sbjct: 194 SRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIK--ERDEVMGN 251
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
+ RV+V K+K++ P+KQ EF+I++G GVSK+G ++D +V + GAW+SY QRLGQ
Sbjct: 252 QTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQ 311
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A QYL+DNP + EIE +R
Sbjct: 312 GRENAKQYLKDNPEVAREIETTLR 335
>sp|Q2RQH9|RECA_RHORT Protein RecA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB
8255) GN=recA PE=3 SV=1
Length = 366
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/329 (57%), Positives = 251/329 (76%), Gaps = 4/329 (1%)
Query: 85 DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPK 142
D +D+Q+AL+AA+ I +FGKGS+ +LG G + +E+ +G L LD+ALG GGLP+
Sbjct: 10 DKDTMDKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPR 69
Query: 143 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQ 202
GRIVEI+GPESSGKTTLALH +AE QK GG VDAEHAFDP Y++ LGV +++L+V Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQ 129
Query: 203 PDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 262
PD GE ALEIAD + RSGAID++ +DSV+AL P+AE+EG++G +GLQARLMSQALRK+
Sbjct: 130 PDTGEQALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKL 189
Query: 263 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 322
+G S++ +IF+NQIR KIGV +GNPE T+GG ALKF+ASVRL+IR G +K +E
Sbjct: 190 TGTVSRSNTLIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKD--KEE 247
Query: 323 DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQ 382
VG + RV+V K+KV+ P+K EF+I++GEG+SKLG MLD +I+ + GAW+SY
Sbjct: 248 VVGNQTRVKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGAWFSYNST 307
Query: 383 RLGQGRDKALQYLRDNPLLQEEIEKVVRS 411
R+GQGR+ A Q+LRDNP + EEIE VR+
Sbjct: 308 RIGQGRENAKQFLRDNPAMAEEIENAVRA 336
>sp|Q8RA55|RECA_THETN Protein RecA OS=Thermoanaerobacter tengcongensis (strain DSM 15242
/ JCM 11007 / NBRC 100824 / MB4) GN=recA PE=3 SV=2
Length = 342
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 180/324 (55%), Positives = 250/324 (77%), Gaps = 3/324 (0%)
Query: 88 FLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIV 146
+++Q+AL+ A++ I FGKG++ RLG VE P+G L LD+ALG GG+P+GRI+
Sbjct: 2 MIEKQKALEMAISQIERQFGKGAIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRII 61
Query: 147 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNG 206
EIFGPESSGKTTLALH IAE QK+GG +DAEHA DP Y+K LGV++++L+V QPD G
Sbjct: 62 EIFGPESSGKTTLALHMIAEAQKIGGTGAFIDAEHALDPVYAKNLGVNIDDLLVAQPDTG 121
Query: 207 EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 266
E ALEIA+ + RSGA+D+I +DSV+AL P+AEIEGE+G +GLQARLMSQALRK++G
Sbjct: 122 EQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGVT 181
Query: 267 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGV 326
SK+ ++F+NQ+R K+GV +GNPE T GG ALKF+A++RL++R IK +G+E VG
Sbjct: 182 SKSKSIVVFINQLREKVGVMFGNPETTPGGRALKFYATIRLDVRKVDNIK--QGNEIVGS 239
Query: 327 RVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQ 386
R RV+V K+K++ P+KQAEF+I++GEG+S+ G +LD +DI+ + G+WYSY D +LGQ
Sbjct: 240 RTRVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDLGTALDIIEKSGSWYSYKDIKLGQ 299
Query: 387 GRDKALQYLRDNPLLQEEIEKVVR 410
GR+ A Q+L++N + EEIE+ +R
Sbjct: 300 GRENAKQFLKENKEIAEEIERKIR 323
>sp|P42438|RECA_ACIAD Protein RecA OS=Acinetobacter sp. (strain ADP1) GN=recA PE=3 SV=1
Length = 349
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 250/325 (76%), Gaps = 3/325 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
++ +AL AA++ I FGK +V RLG VE +G LTLD+ALG GGLPKGRIVEI
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ L AIA+ QK GG +DAEHA DP Y++ LGVD++NL+V QPD+GE
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEIAD + RSGAIDLI VDSV+ALTP+AEIEGE+G +GLQARLMSQALRK++GNA +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQIR KIGV +G+PE T+GG ALKF+ASVRL+IR G++K +GDE +G
Sbjct: 184 SNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVK--EGDEIIGSET 241
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
+V+V K+K++ P+++A F+I++G+GV++LG ++D A +IV + GAWYSY ++GQG+
Sbjct: 242 KVKVVKNKMAPPFREAIFQILYGKGVNQLGELVDLAVQQNIVQKAGAWYSYQGNKIGQGK 301
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMM 413
+ ++YL +NP + EIE V+R +
Sbjct: 302 NNVIRYLEENPQISTEIEAVIREQL 326
>sp|Q0SSE7|RECA_CLOPS Protein RecA OS=Clostridium perfringens (strain SM101 / Type A)
GN=recA PE=3 SV=1
Length = 352
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +A++ AM I FGKGSV +LG G ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 DKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QKLGG A +DAEHA DP Y+K LGV++++L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 127 ALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+G+ +GNPE T GG ALKF+ASVR++IR IK +GD G R
Sbjct: 187 SNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIK--QGDGITGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQAEF+I++ EG+SK G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A QYL++NP + +IE +R S
Sbjct: 305 ENAKQYLKENPSVALDIENQIREKYS 330
>sp|P94666|RECA_CLOPE Protein RecA OS=Clostridium perfringens (strain 13 / Type A)
GN=recA PE=3 SV=1
Length = 352
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 90 DRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG-GGLPKGRIVEI 148
D+ +A++ AM I FGKGSV +LG G ++ +GCL LD+ALG GG+PKGRI+EI
Sbjct: 7 DKLKAIEMAMGQIEKQFGKGSVMKLGEQGAPQMDAVSTGCLDLDIALGIGGVPKGRIIEI 66
Query: 149 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDNGEM 208
+GPESSGKTT+ALH +AE QKLGG A +DAEHA DP Y+K LGV++++L+V QPD GE
Sbjct: 67 YGPESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQ 126
Query: 209 ALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASK 268
ALEI + + RSGAID++ VDSV+AL PRAEIEGE+G +GLQARLMSQALRK++G +K
Sbjct: 127 ALEITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINK 186
Query: 269 AGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRV 328
+ C +IF+NQ+R K+G+ +GNPE T GG ALKF+ASVR++IR IK +GD G R
Sbjct: 187 SNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIK--QGDGITGNRT 244
Query: 329 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGR 388
RV++ K+KV+ P+KQAEF+I++ EG+SK G ++D +IV + GAW+SYGD RLGQGR
Sbjct: 245 RVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWFSYGDIRLGQGR 304
Query: 389 DKALQYLRDNPLLQEEIEKVVRSMMS 414
+ A QYL++NP + +IE +R S
Sbjct: 305 ENAKQYLKENPAVALDIENQIREKYS 330
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,162,936
Number of Sequences: 539616
Number of extensions: 6340798
Number of successful extensions: 26247
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 23926
Number of HSP's gapped (non-prelim): 950
length of query: 440
length of database: 191,569,459
effective HSP length: 121
effective length of query: 319
effective length of database: 126,275,923
effective search space: 40282019437
effective search space used: 40282019437
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)