Query 013568
Match_columns 440
No_of_seqs 430 out of 2669
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 05:10:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013568.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013568hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00788 fbt folate/biopterin 100.0 7.4E-27 1.6E-31 233.9 28.3 314 120-435 13-334 (468)
2 COG2814 AraJ Arabinose efflux 99.9 1.4E-25 3.1E-30 212.8 26.3 271 134-434 14-291 (394)
3 COG2271 UhpC Sugar phosphate p 99.9 3.1E-25 6.6E-30 207.8 19.2 292 134-435 30-336 (448)
4 PRK11010 ampG muropeptide tran 99.9 1E-23 2.2E-28 212.8 25.9 280 134-430 13-300 (491)
5 PRK11902 ampG muropeptide tran 99.9 1.4E-23 3.1E-28 207.1 25.2 276 138-430 4-287 (402)
6 PRK03545 putative arabinose tr 99.9 1.3E-23 2.9E-28 206.5 24.1 244 154-425 31-277 (390)
7 TIGR00900 2A0121 H+ Antiporter 99.9 2.5E-23 5.3E-28 202.0 23.6 277 138-431 4-289 (365)
8 TIGR00710 efflux_Bcr_CflA drug 99.9 3.2E-23 7E-28 203.0 24.4 270 138-430 10-283 (385)
9 PF03092 BT1: BT1 family; Int 99.9 6.8E-23 1.5E-27 202.8 24.6 289 150-439 7-305 (433)
10 PRK10091 MFS transport protein 99.9 4.7E-23 1E-27 202.0 22.5 270 134-431 4-277 (382)
11 TIGR02332 HpaX 4-hydroxyphenyl 99.9 6.4E-23 1.4E-27 202.9 23.6 277 135-421 10-311 (412)
12 PRK14995 methyl viologen resis 99.9 1.1E-22 2.3E-27 206.1 25.2 285 135-431 8-337 (495)
13 TIGR00891 2A0112 putative sial 99.9 9.8E-23 2.1E-27 200.8 24.3 285 135-429 14-314 (405)
14 PRK11102 bicyclomycin/multidru 99.9 8.2E-23 1.8E-27 199.8 22.7 260 149-429 8-270 (377)
15 TIGR00890 2A0111 Oxalate/Forma 99.9 8.9E-23 1.9E-27 198.8 22.8 259 154-433 24-284 (377)
16 PRK11663 regulatory protein Uh 99.9 1.1E-22 2.4E-27 202.8 23.6 270 137-416 27-306 (434)
17 TIGR00901 2A0125 AmpG-related 99.9 1.3E-22 2.8E-27 197.0 23.0 266 150-433 6-289 (356)
18 PRK12307 putative sialic acid 99.9 1.1E-22 2.3E-27 202.4 22.5 285 135-432 20-309 (426)
19 TIGR00886 2A0108 nitrite extru 99.9 1.6E-22 3.4E-27 196.9 22.4 283 134-428 2-300 (366)
20 PF07690 MFS_1: Major Facilita 99.9 3.3E-23 7.1E-28 200.2 17.2 280 139-433 2-287 (352)
21 PRK10213 nepI ribonucleoside t 99.9 2.7E-22 5.9E-27 197.3 23.8 241 152-420 40-283 (394)
22 PRK10473 multidrug efflux syst 99.9 3.4E-22 7.4E-27 196.6 24.5 259 149-431 20-281 (392)
23 PRK09556 uhpT sugar phosphate 99.9 7.5E-23 1.6E-27 205.9 20.1 280 137-425 33-330 (467)
24 PRK15403 multidrug efflux syst 99.9 5.8E-22 1.3E-26 196.1 25.7 251 149-421 33-286 (413)
25 PRK10133 L-fucose transporter; 99.9 5.5E-22 1.2E-26 197.5 25.0 279 134-432 27-338 (438)
26 PRK15402 multidrug efflux syst 99.9 5.1E-22 1.1E-26 196.3 24.6 259 149-429 30-291 (406)
27 TIGR00711 efflux_EmrB drug res 99.9 1.2E-22 2.5E-27 205.6 19.8 289 135-433 4-335 (485)
28 PRK11551 putative 3-hydroxyphe 99.9 3.7E-22 8E-27 197.3 22.6 273 137-429 19-295 (406)
29 TIGR00899 2A0120 sugar efflux 99.9 5.9E-22 1.3E-26 193.5 23.6 267 140-430 4-276 (375)
30 PRK11195 lysophospholipid tran 99.9 1.1E-21 2.4E-26 192.9 25.3 272 134-426 4-278 (393)
31 PRK10406 alpha-ketoglutarate t 99.9 9E-22 2E-26 196.1 23.1 268 137-428 26-318 (432)
32 TIGR00893 2A0114 d-galactonate 99.9 1E-22 2.2E-27 199.5 15.8 260 151-420 13-282 (399)
33 PRK10642 proline/glycine betai 99.9 6E-22 1.3E-26 200.5 21.8 281 135-428 18-325 (490)
34 TIGR00881 2A0104 phosphoglycer 99.9 4.6E-22 9.9E-27 194.0 19.4 265 142-416 4-279 (379)
35 PRK09705 cynX putative cyanate 99.9 7.9E-22 1.7E-26 194.0 21.0 253 150-431 27-282 (393)
36 TIGR00903 2A0129 major facilit 99.9 1.6E-21 3.5E-26 189.4 22.3 240 150-417 9-251 (368)
37 PRK10504 putative transporter; 99.9 6.5E-22 1.4E-26 199.4 20.1 290 134-433 11-341 (471)
38 PRK11043 putative transporter; 99.9 3.6E-21 7.7E-26 190.0 24.7 250 149-425 23-274 (401)
39 TIGR00792 gph sugar (Glycoside 99.9 2E-21 4.3E-26 193.9 22.3 273 143-432 9-300 (437)
40 PLN00028 nitrate transmembrane 99.9 5.4E-21 1.2E-25 192.5 25.4 248 157-419 60-318 (476)
41 PRK10489 enterobactin exporter 99.9 5.9E-21 1.3E-25 189.4 24.3 277 134-430 18-300 (417)
42 TIGR00902 2A0127 phenyl propri 99.9 7.7E-21 1.7E-25 186.3 24.7 275 136-433 7-284 (382)
43 PRK15034 nitrate/nitrite trans 99.9 4.2E-21 9.2E-26 188.6 22.6 269 134-433 34-330 (462)
44 PRK03699 putative transporter; 99.9 2.7E-21 5.8E-26 190.4 21.0 271 135-431 9-283 (394)
45 TIGR00885 fucP L-fucose:H+ sym 99.9 7.9E-21 1.7E-25 187.5 24.2 280 134-435 4-315 (410)
46 TIGR00897 2A0118 polyol permea 99.9 6.9E-21 1.5E-25 188.0 23.3 270 134-423 14-291 (402)
47 PRK10054 putative transporter; 99.9 5.5E-21 1.2E-25 188.1 22.0 272 134-430 8-285 (395)
48 TIGR02718 sider_RhtX_FptX side 99.9 2.1E-20 4.6E-25 183.8 26.0 275 135-429 3-284 (390)
49 PRK11652 emrD multidrug resist 99.9 1E-20 2.2E-25 186.3 23.2 256 138-418 13-272 (394)
50 PRK11128 putative 3-phenylprop 99.9 1.6E-20 3.4E-25 184.1 24.2 265 142-432 13-283 (382)
51 PRK05122 major facilitator sup 99.9 1.8E-20 3.8E-25 184.9 23.8 267 134-431 16-291 (399)
52 TIGR00895 2A0115 benzoate tran 99.9 3.9E-21 8.4E-26 188.8 18.9 277 138-424 22-320 (398)
53 PRK12382 putative transporter; 99.9 3.9E-20 8.4E-25 182.0 25.2 268 134-432 16-292 (392)
54 PRK03633 putative MFS family t 99.9 1.5E-20 3.2E-25 184.3 21.8 268 134-431 7-277 (381)
55 PRK15011 sugar efflux transpor 99.9 3.7E-20 8E-25 182.2 24.2 271 132-428 14-291 (393)
56 PRK03893 putative sialic acid 99.9 2.7E-20 5.9E-25 188.9 23.7 285 135-431 22-353 (496)
57 PRK11273 glpT sn-glycerol-3-ph 99.9 1.1E-20 2.3E-25 189.5 20.3 256 156-420 52-322 (452)
58 PRK09952 shikimate transporter 99.9 2.1E-20 4.5E-25 186.5 22.2 277 135-430 24-327 (438)
59 TIGR01299 synapt_SV2 synaptic 99.9 4.2E-20 9.2E-25 191.8 24.7 172 140-321 174-360 (742)
60 TIGR00712 glpT glycerol-3-phos 99.9 2.2E-20 4.7E-25 186.5 21.8 273 136-418 30-316 (438)
61 KOG1330 Sugar transporter/spin 99.9 4.2E-22 9.1E-27 188.6 8.5 267 135-415 35-309 (493)
62 TIGR00805 oat sodium-independe 99.9 4.2E-21 9.1E-26 198.4 16.7 283 139-431 39-411 (633)
63 PRK09874 drug efflux system pr 99.9 5.1E-20 1.1E-24 182.0 23.6 272 134-431 15-300 (408)
64 TIGR00879 SP MFS transporter, 99.9 1.1E-20 2.3E-25 190.1 19.1 281 143-432 38-362 (481)
65 PRK10077 xylE D-xylose transpo 99.9 1.1E-20 2.3E-25 190.9 19.0 287 137-433 16-350 (479)
66 PRK11646 multidrug resistance 99.9 1.4E-19 3E-24 178.4 25.5 264 138-428 15-283 (400)
67 PRK15075 citrate-proton sympor 99.8 5.6E-20 1.2E-24 183.3 20.4 272 135-429 17-314 (434)
68 KOG2533 Permease of the major 99.8 1.4E-20 3.1E-25 186.4 14.4 286 138-433 50-357 (495)
69 COG2223 NarK Nitrate/nitrite t 99.8 5E-20 1.1E-24 173.3 16.9 278 133-435 13-300 (417)
70 PRK09669 putative symporter Ya 99.8 4E-19 8.6E-24 177.7 24.1 276 136-431 12-306 (444)
71 TIGR00887 2A0109 phosphate:H+ 99.8 3.5E-19 7.6E-24 180.9 22.3 176 137-321 20-230 (502)
72 TIGR00892 2A0113 monocarboxyla 99.8 1.1E-18 2.4E-23 174.8 25.4 254 151-416 38-303 (455)
73 cd06174 MFS The Major Facilita 99.8 2.4E-19 5.2E-24 172.7 19.8 251 137-434 3-257 (352)
74 PRK10429 melibiose:sodium symp 99.8 7.2E-19 1.6E-23 177.2 24.0 281 135-430 8-307 (473)
75 TIGR00882 2A0105 oligosacchari 99.8 5.1E-19 1.1E-23 174.3 22.1 281 133-431 2-296 (396)
76 PRK06814 acylglycerophosphoeth 99.8 7.1E-19 1.5E-23 195.6 25.6 245 168-428 52-300 (1140)
77 TIGR00894 2A0114euk Na(+)-depe 99.8 3.5E-20 7.5E-25 186.6 13.6 246 162-418 70-326 (465)
78 TIGR00896 CynX cyanate transpo 99.8 4.2E-19 9.1E-24 172.3 20.5 250 151-429 19-273 (355)
79 PRK09528 lacY galactoside perm 99.8 6.2E-19 1.4E-23 175.1 21.5 285 132-431 9-304 (420)
80 PF05977 MFS_3: Transmembrane 99.8 3.2E-18 6.9E-23 172.2 24.6 280 133-432 10-297 (524)
81 COG2211 MelB Na+/melibiose sym 99.8 3.3E-18 7.3E-23 165.9 23.4 288 134-437 13-320 (467)
82 PF13347 MFS_2: MFS/sugar tran 99.8 2.1E-19 4.6E-24 178.8 15.3 276 143-436 11-307 (428)
83 TIGR00889 2A0110 nucleoside tr 99.8 4E-18 8.7E-23 168.8 24.0 270 138-432 7-294 (418)
84 PRK11462 putative transporter; 99.8 4E-18 8.7E-23 170.7 24.1 270 137-427 13-301 (460)
85 TIGR00883 2A0106 metabolite-pr 99.8 7.5E-19 1.6E-23 172.2 18.3 244 165-429 27-295 (394)
86 PRK08633 2-acyl-glycerophospho 99.8 3.8E-18 8.3E-23 190.2 25.7 284 134-431 10-311 (1146)
87 TIGR00898 2A0119 cation transp 99.8 1E-18 2.2E-23 177.8 18.8 260 159-434 115-400 (505)
88 COG0738 FucP Fucose permease [ 99.8 9.4E-18 2E-22 157.0 21.8 280 134-435 14-318 (422)
89 KOG0569 Permease of the major 99.8 9.2E-18 2E-22 164.4 19.5 268 160-437 46-353 (485)
90 KOG2532 Permease of the major 99.8 7.9E-19 1.7E-23 173.6 10.1 250 161-418 66-323 (466)
91 PRK10207 dipeptide/tripeptide 99.8 5.7E-17 1.2E-21 163.2 21.7 175 134-316 15-194 (489)
92 KOG3764 Vesicular amine transp 99.8 1E-18 2.2E-23 162.3 7.3 232 163-418 101-335 (464)
93 PRK09848 glucuronide transport 99.7 4.9E-16 1.1E-20 155.7 25.9 280 137-432 12-307 (448)
94 KOG0254 Predicted transporter 99.7 2E-16 4.2E-21 161.0 23.0 254 169-435 90-375 (513)
95 TIGR01301 GPH_sucrose GPH fami 99.7 7.3E-16 1.6E-20 152.7 26.1 287 134-430 5-347 (477)
96 TIGR00806 rfc RFC reduced fola 99.7 9.8E-16 2.1E-20 148.4 24.2 170 138-319 32-206 (511)
97 TIGR00924 yjdL_sub1_fam amino 99.7 9E-16 1.9E-20 154.4 23.7 173 134-314 11-190 (475)
98 PRK09584 tppB putative tripept 99.7 7E-15 1.5E-19 148.8 26.7 170 134-310 22-195 (500)
99 PF01306 LacY_symp: LacY proto 99.7 5E-16 1.1E-20 149.5 16.3 281 134-431 8-301 (412)
100 KOG2615 Permease of the major 99.7 6.9E-16 1.5E-20 142.8 16.0 244 164-417 64-325 (451)
101 PF03825 Nuc_H_symport: Nucleo 99.7 1.1E-14 2.3E-19 142.5 23.2 272 138-431 7-285 (400)
102 PF06609 TRI12: Fungal trichot 99.7 4.8E-15 1E-19 149.0 19.6 147 154-311 65-212 (599)
103 PF03209 PUCC: PUCC protein; 99.7 3.5E-14 7.7E-19 134.4 22.9 265 159-435 6-291 (403)
104 COG2807 CynX Cyanate permease 99.6 2.8E-14 6E-19 132.0 19.4 256 154-436 33-290 (395)
105 KOG2504 Monocarboxylate transp 99.6 3.1E-14 6.6E-19 142.8 20.2 255 154-418 67-362 (509)
106 KOG0255 Synaptic vesicle trans 99.6 1.2E-14 2.6E-19 148.5 17.2 261 161-437 111-398 (521)
107 PRK15462 dipeptide/tripeptide 99.6 4.8E-13 1E-17 133.3 24.2 171 134-312 10-185 (493)
108 PF11700 ATG22: Vacuole efflux 99.6 5.8E-13 1.3E-17 132.9 24.7 255 171-434 73-364 (477)
109 PF00083 Sugar_tr: Sugar (and 99.5 4.7E-17 1E-21 163.1 -8.8 255 169-436 47-333 (451)
110 TIGR01272 gluP glucose/galacto 99.5 8.4E-14 1.8E-18 132.2 13.5 196 222-433 6-222 (310)
111 COG2271 UhpC Sugar phosphate p 99.5 1.4E-13 3.1E-18 129.8 12.8 177 129-311 248-429 (448)
112 PRK15011 sugar efflux transpor 99.5 4.7E-12 1E-16 124.7 20.7 159 149-317 233-392 (393)
113 COG3104 PTR2 Dipeptide/tripept 99.5 1.1E-11 2.4E-16 119.9 22.0 178 134-316 22-206 (498)
114 KOG0253 Synaptic vesicle trans 99.5 2.3E-12 5E-17 119.0 15.6 162 149-321 94-256 (528)
115 PRK09556 uhpT sugar phosphate 99.4 2.4E-12 5.1E-17 129.7 16.8 177 131-315 256-448 (467)
116 KOG0252 Inorganic phosphate tr 99.4 4E-13 8.7E-18 127.6 9.8 177 137-322 45-252 (538)
117 COG2270 Permeases of the major 99.4 7.4E-12 1.6E-16 118.5 17.8 270 154-437 37-336 (438)
118 TIGR00899 2A0120 sugar efflux 99.4 1.3E-11 2.9E-16 120.3 20.3 159 149-317 216-375 (375)
119 PTZ00207 hypothetical protein; 99.4 2.1E-11 4.6E-16 123.6 21.7 154 154-319 48-209 (591)
120 PRK11663 regulatory protein Uh 99.4 8.2E-12 1.8E-16 124.6 17.6 178 132-314 242-422 (434)
121 PRK09528 lacY galactoside perm 99.4 5.4E-12 1.2E-16 125.4 15.8 158 153-319 244-407 (420)
122 TIGR00889 2A0110 nucleoside tr 99.4 9.2E-12 2E-16 123.5 16.7 177 134-319 209-406 (418)
123 TIGR00890 2A0111 Oxalate/Forma 99.4 1.6E-11 3.4E-16 119.5 16.7 167 133-309 205-375 (377)
124 TIGR00902 2A0127 phenyl propri 99.4 3.5E-11 7.7E-16 118.0 19.1 171 131-313 203-376 (382)
125 PF05631 DUF791: Protein of un 99.4 5.3E-10 1.1E-14 104.7 25.2 255 161-436 62-326 (354)
126 TIGR01299 synapt_SV2 synaptic 99.4 1.1E-11 2.4E-16 129.4 15.7 135 176-320 603-738 (742)
127 PRK10642 proline/glycine betai 99.4 4.4E-11 9.5E-16 121.3 19.7 164 149-321 267-435 (490)
128 KOG2563 Permease of the major 99.4 9.6E-11 2.1E-15 111.6 19.9 262 143-424 55-336 (480)
129 PRK10489 enterobactin exporter 99.3 4.8E-11 1E-15 118.5 18.7 163 149-320 240-404 (417)
130 cd06174 MFS The Major Facilita 99.3 3E-11 6.5E-16 116.2 16.6 169 138-315 180-351 (352)
131 KOG3626 Organic anion transpor 99.3 4.3E-11 9.4E-16 121.6 18.2 275 135-418 99-458 (735)
132 TIGR00880 2_A_01_02 Multidrug 99.3 7E-12 1.5E-16 103.7 10.5 132 177-317 7-140 (141)
133 TIGR00893 2A0114 d-galactonate 99.3 2.3E-11 5E-16 118.9 15.9 173 132-312 214-395 (399)
134 PRK03699 putative transporter; 99.3 4.5E-11 9.8E-16 117.7 18.0 173 134-316 206-380 (394)
135 TIGR00883 2A0106 metabolite-pr 99.3 3.7E-11 7.9E-16 117.7 16.3 164 135-306 221-391 (394)
136 PRK11551 putative 3-hydroxyphe 99.3 3.5E-11 7.6E-16 118.9 16.1 168 138-315 225-395 (406)
137 PRK09874 drug efflux system pr 99.3 7.3E-11 1.6E-15 116.6 18.2 156 149-314 236-396 (408)
138 PRK03545 putative arabinose tr 99.3 9E-11 1.9E-15 115.4 18.7 153 151-313 224-377 (390)
139 PRK11273 glpT sn-glycerol-3-ph 99.3 6.3E-11 1.4E-15 118.9 17.3 175 132-312 252-431 (452)
140 TIGR00892 2A0113 monocarboxyla 99.3 1.9E-11 4.1E-16 122.7 13.4 172 132-310 240-415 (455)
141 PRK05122 major facilitator sup 99.3 8.7E-11 1.9E-15 115.8 17.5 158 149-318 233-391 (399)
142 PRK03633 putative MFS family t 99.3 1.2E-10 2.7E-15 114.1 18.2 154 149-315 217-371 (381)
143 KOG4686 Predicted sugar transp 99.3 9.1E-13 2E-17 117.4 1.6 289 132-437 40-348 (459)
144 TIGR00897 2A0118 polyol permea 99.3 2.4E-10 5.3E-15 112.8 19.0 174 132-315 221-400 (402)
145 KOG3574 Acetyl-CoA transporter 99.2 1.5E-10 3.3E-15 107.4 14.3 264 134-413 32-324 (510)
146 TIGR00881 2A0104 phosphoglycer 99.2 1.9E-10 4.1E-15 112.0 15.4 160 132-298 215-379 (379)
147 PRK09705 cynX putative cyanate 99.2 6.6E-10 1.4E-14 109.4 18.9 177 133-320 205-386 (393)
148 PRK09952 shikimate transporter 99.2 7.2E-10 1.6E-14 110.7 18.9 169 142-318 259-435 (438)
149 PRK10504 putative transporter; 99.2 1.2E-09 2.5E-14 110.3 20.0 155 132-294 260-418 (471)
150 PRK11010 ampG muropeptide tran 99.2 3.8E-09 8.2E-14 107.0 23.5 162 149-318 239-405 (491)
151 COG2814 AraJ Arabinose efflux 99.2 1.1E-09 2.3E-14 104.9 18.2 174 131-314 209-384 (394)
152 PRK12382 putative transporter; 99.2 5.9E-10 1.3E-14 109.6 17.0 152 150-313 234-386 (392)
153 PF03137 OATP: Organic Anion T 99.2 1.5E-12 3.3E-17 131.7 -1.6 280 138-427 8-382 (539)
154 TIGR00712 glpT glycerol-3-phos 99.2 5.8E-10 1.3E-14 111.4 17.0 180 132-319 250-437 (438)
155 TIGR00894 2A0114euk Na(+)-depe 99.2 4.9E-10 1.1E-14 112.9 15.8 184 131-318 259-452 (465)
156 COG2223 NarK Nitrate/nitrite t 99.2 5E-10 1.1E-14 106.2 14.4 175 130-313 215-398 (417)
157 PRK03893 putative sialic acid 99.2 6.9E-10 1.5E-14 112.7 16.7 150 150-307 293-444 (496)
158 TIGR00882 2A0105 oligosacchari 99.2 1.8E-09 3.8E-14 106.5 19.1 171 132-311 214-390 (396)
159 PRK11128 putative 3-phenylprop 99.2 2.3E-09 5E-14 105.1 19.3 167 132-310 204-373 (382)
160 PLN00028 nitrate transmembrane 99.2 8.5E-10 1.8E-14 111.4 16.3 180 132-317 251-434 (476)
161 KOG2325 Predicted transporter/ 99.2 1.4E-09 3E-14 106.5 17.0 181 134-322 35-236 (488)
162 TIGR00879 SP MFS transporter, 99.2 5.9E-10 1.3E-14 112.0 14.9 173 138-319 289-474 (481)
163 PF11700 ATG22: Vacuole efflux 99.1 3E-09 6.5E-14 106.4 18.7 181 133-320 281-472 (477)
164 KOG2816 Predicted transporter 99.1 6.2E-09 1.3E-13 103.1 20.5 231 184-428 79-317 (463)
165 PF05977 MFS_3: Transmembrane 99.1 3.8E-09 8.1E-14 106.8 19.4 154 149-311 235-389 (524)
166 TIGR02718 sider_RhtX_FptX side 99.1 2.9E-09 6.3E-14 104.7 18.1 169 134-311 209-386 (390)
167 TIGR00891 2A0112 putative sial 99.1 1.5E-09 3.3E-14 106.8 15.3 145 149-301 255-401 (405)
168 TIGR00903 2A0129 major facilit 99.1 3.7E-09 8E-14 102.9 17.8 175 132-317 191-366 (368)
169 PRK10406 alpha-ketoglutarate t 99.1 5.9E-09 1.3E-13 104.0 18.3 177 133-317 242-425 (432)
170 PRK10054 putative transporter; 99.1 5.2E-09 1.1E-13 103.1 17.6 178 133-319 206-388 (395)
171 TIGR02332 HpaX 4-hydroxyphenyl 99.1 1.5E-09 3.2E-14 107.6 13.5 166 132-305 241-410 (412)
172 KOG2532 Permease of the major 99.1 1E-09 2.2E-14 109.0 12.2 188 124-315 249-446 (466)
173 PRK11902 ampG muropeptide tran 99.1 5.6E-09 1.2E-13 103.1 17.4 151 154-316 231-390 (402)
174 PF13000 Acatn: Acetyl-coenzym 99.1 1.5E-08 3.3E-13 98.1 18.7 273 136-413 3-337 (544)
175 TIGR00887 2A0109 phosphate:H+ 99.0 2.4E-09 5.3E-14 108.9 14.1 173 139-320 294-493 (502)
176 TIGR00900 2A0121 H+ Antiporter 99.0 2.8E-09 6E-14 103.2 13.9 151 134-293 211-365 (365)
177 PRK10213 nepI ribonucleoside t 99.0 1.9E-08 4.1E-13 99.1 19.6 168 132-309 215-384 (394)
178 PRK15075 citrate-proton sympor 99.0 1.8E-08 3.8E-13 100.6 19.3 139 149-295 255-398 (434)
179 PF03825 Nuc_H_symport: Nucleo 99.0 2.1E-08 4.6E-13 98.3 19.1 179 131-318 205-398 (400)
180 KOG4686 Predicted sugar transp 99.0 1E-08 2.3E-13 91.9 15.1 162 131-302 262-428 (459)
181 TIGR00792 gph sugar (Glycoside 99.0 1.8E-09 3.9E-14 107.8 11.7 154 132-294 221-383 (437)
182 PRK10091 MFS transport protein 99.0 2.3E-08 5E-13 98.0 18.6 149 152-310 219-370 (382)
183 KOG0637 Sucrose transporter an 99.0 3.6E-09 7.9E-14 101.0 12.3 148 134-287 33-201 (498)
184 PRK15402 multidrug efflux syst 99.0 2.9E-08 6.3E-13 98.1 19.0 170 132-310 214-389 (406)
185 PRK12307 putative sialic acid 99.0 1.4E-08 2.9E-13 101.1 15.7 143 150-302 249-394 (426)
186 TIGR00895 2A0115 benzoate tran 99.0 1E-08 2.2E-13 100.5 14.0 144 135-288 252-397 (398)
187 KOG0569 Permease of the major 99.0 7.5E-09 1.6E-13 102.1 12.7 177 135-321 271-460 (485)
188 PRK10077 xylE D-xylose transpo 98.9 3.9E-08 8.5E-13 99.4 18.3 157 154-319 293-461 (479)
189 PRK06814 acylglycerophosphoeth 98.9 3.5E-08 7.6E-13 110.4 18.9 168 132-307 224-413 (1140)
190 PRK08633 2-acyl-glycerophospho 98.9 3.6E-08 7.9E-13 110.4 18.4 164 134-306 233-400 (1146)
191 PRK11646 multidrug resistance 98.9 3.2E-08 6.8E-13 97.7 15.9 152 151-311 227-383 (400)
192 TIGR00896 CynX cyanate transpo 98.9 4E-08 8.8E-13 95.2 16.5 151 133-293 197-350 (355)
193 TIGR01272 gluP glucose/galacto 98.9 8.3E-08 1.8E-12 91.2 17.8 146 149-306 157-305 (310)
194 KOG2504 Monocarboxylate transp 98.9 2.6E-08 5.6E-13 100.3 15.0 178 131-316 296-476 (509)
195 TIGR00898 2A0119 cation transp 98.9 3.2E-08 6.9E-13 100.8 15.7 145 163-320 353-499 (505)
196 PRK15034 nitrate/nitrite trans 98.9 7.4E-08 1.6E-12 95.4 16.1 178 129-313 248-451 (462)
197 COG2270 Permeases of the major 98.9 2E-07 4.4E-12 88.8 18.1 156 155-319 275-432 (438)
198 COG2807 CynX Cyanate permease 98.9 1.5E-07 3.3E-12 87.7 16.8 173 132-313 207-382 (395)
199 TIGR00926 2A1704 Peptide:H+ sy 98.8 2.5E-07 5.5E-12 95.8 19.7 157 153-313 8-179 (654)
200 TIGR00710 efflux_Bcr_CflA drug 98.8 1.5E-07 3.3E-12 92.0 17.2 160 133-301 206-371 (385)
201 PRK14995 methyl viologen resis 98.8 1.1E-07 2.3E-12 96.6 16.4 149 134-290 260-412 (495)
202 TIGR00711 efflux_EmrB drug res 98.8 1.2E-07 2.6E-12 95.9 16.5 154 133-294 255-413 (485)
203 PRK10473 multidrug efflux syst 98.8 3.3E-07 7.2E-12 90.1 18.9 141 151-305 222-363 (392)
204 PRK10133 L-fucose transporter; 98.8 3E-07 6.4E-12 91.9 17.9 149 150-310 276-427 (438)
205 PF13347 MFS_2: MFS/sugar tran 98.8 2.3E-07 4.9E-12 92.5 16.2 154 131-293 223-386 (428)
206 PF01306 LacY_symp: LacY proto 98.8 3.3E-07 7.1E-12 88.9 16.5 183 129-320 216-405 (412)
207 PRK09848 glucuronide transport 98.8 1.8E-07 4E-12 93.7 15.3 156 131-294 226-391 (448)
208 PF06963 FPN1: Ferroportin1 (F 98.8 6.6E-06 1.4E-10 80.8 25.4 289 135-429 4-333 (432)
209 PRK11195 lysophospholipid tran 98.7 5.6E-07 1.2E-11 88.6 17.8 151 150-311 223-375 (393)
210 TIGR00769 AAA ADP/ATP carrier 98.7 1.6E-06 3.5E-11 86.0 18.7 279 134-429 8-343 (472)
211 PF07690 MFS_1: Major Facilita 98.6 1.6E-07 3.4E-12 90.5 9.9 137 138-282 211-352 (352)
212 KOG3764 Vesicular amine transp 98.6 1.6E-07 3.4E-12 88.5 8.5 161 149-314 287-452 (464)
213 PRK09669 putative symporter Ya 98.6 8.3E-07 1.8E-11 88.9 13.7 158 131-294 227-391 (444)
214 PRK11102 bicyclomycin/multidru 98.6 2.5E-06 5.5E-11 83.2 16.8 129 150-286 212-344 (377)
215 PF01770 Folate_carrier: Reduc 98.6 1.8E-05 3.8E-10 76.6 21.8 256 152-419 23-315 (412)
216 PRK11043 putative transporter; 98.6 3.8E-06 8.3E-11 82.8 18.1 136 150-295 221-361 (401)
217 PF06813 Nodulin-like: Nodulin 98.6 5.4E-06 1.2E-10 75.3 17.1 159 152-319 21-185 (250)
218 TIGR00901 2A0125 AmpG-related 98.5 1.4E-06 2.9E-11 84.5 14.0 130 135-270 211-353 (356)
219 PRK11652 emrD multidrug resist 98.5 4.9E-06 1.1E-10 81.9 15.9 137 150-295 225-364 (394)
220 TIGR00924 yjdL_sub1_fam amino 98.4 5.4E-06 1.2E-10 83.7 15.8 156 150-312 290-464 (475)
221 KOG0253 Synaptic vesicle trans 98.4 2.4E-06 5.3E-11 79.8 11.7 124 186-320 400-523 (528)
222 PRK10429 melibiose:sodium symp 98.4 1.1E-05 2.4E-10 81.4 16.8 154 132-294 230-396 (473)
223 TIGR00886 2A0108 nitrite extru 98.4 3.4E-06 7.3E-11 81.9 12.0 133 132-270 224-361 (366)
224 COG0738 FucP Fucose permease [ 98.3 2.8E-05 6E-10 74.0 16.3 147 149-307 253-400 (422)
225 KOG3762 Predicted transporter 98.3 2.7E-06 5.8E-11 83.3 9.6 165 138-312 376-543 (618)
226 COG2211 MelB Na+/melibiose sym 98.3 2.4E-05 5.3E-10 76.9 14.8 155 131-293 234-398 (467)
227 TIGR00885 fucP L-fucose:H+ sym 98.2 5.5E-05 1.2E-09 74.9 17.1 147 150-308 250-404 (410)
228 PRK15403 multidrug efflux syst 98.2 4.6E-05 9.9E-10 75.6 16.5 168 131-308 216-389 (413)
229 COG0477 ProP Permeases of the 98.2 0.00011 2.4E-09 68.3 18.1 149 150-307 20-176 (338)
230 PF03209 PUCC: PUCC protein; 98.2 7.4E-05 1.6E-09 71.6 16.5 157 150-313 226-395 (403)
231 PF00083 Sugar_tr: Sugar (and 98.2 3.1E-08 6.8E-13 99.3 -6.7 130 184-321 303-442 (451)
232 TIGR00788 fbt folate/biopterin 98.2 6.7E-06 1.4E-10 82.8 8.6 149 161-317 281-447 (468)
233 KOG4332 Predicted sugar transp 98.1 7.9E-05 1.7E-09 66.8 13.6 255 157-435 61-330 (454)
234 KOG2533 Permease of the major 98.1 7.9E-06 1.7E-10 81.8 7.6 177 122-302 262-442 (495)
235 KOG0252 Inorganic phosphate tr 98.1 9.7E-06 2.1E-10 78.1 7.3 127 186-321 367-503 (538)
236 PRK09584 tppB putative tripept 98.0 0.00015 3.2E-09 73.8 15.5 135 170-310 318-473 (500)
237 KOG3098 Uncharacterized conser 98.0 0.00021 4.5E-09 70.4 15.2 241 176-435 58-328 (461)
238 PRK11462 putative transporter; 98.0 0.00025 5.3E-09 71.4 15.5 155 133-294 228-390 (460)
239 TIGR01301 GPH_sucrose GPH fami 97.9 0.00071 1.5E-08 67.7 16.8 127 186-319 324-475 (477)
240 PF00854 PTR2: POT family; In 97.8 0.00014 3E-09 71.0 10.8 111 204-314 3-121 (372)
241 PF06609 TRI12: Fungal trichot 97.8 0.00043 9.4E-09 70.6 13.5 179 134-319 311-557 (599)
242 PF12832 MFS_1_like: MFS_1 lik 97.8 0.00012 2.7E-09 53.5 7.1 65 139-208 6-72 (77)
243 PF03219 TLC: TLC ATP/ADP tran 97.7 0.0024 5.1E-08 64.1 18.3 274 134-425 25-355 (491)
244 PRK10207 dipeptide/tripeptide 97.6 0.0015 3.3E-08 66.2 15.3 133 172-311 313-471 (489)
245 KOG0254 Predicted transporter 97.6 0.00081 1.8E-08 68.7 13.4 161 150-320 313-488 (513)
246 COG3202 ATP/ADP translocase [E 97.5 0.021 4.6E-07 56.2 20.4 273 134-426 28-359 (509)
247 PF02487 CLN3: CLN3 protein; 97.5 0.021 4.5E-07 55.6 20.3 130 173-317 64-197 (402)
248 PTZ00207 hypothetical protein; 97.1 0.011 2.4E-07 60.7 14.2 180 126-311 346-547 (591)
249 PF12832 MFS_1_like: MFS_1 lik 97.1 0.0012 2.6E-08 48.3 5.2 48 382-429 28-75 (77)
250 PF05978 UNC-93: Ion channel r 97.0 0.027 5.8E-07 47.4 13.3 101 178-288 47-148 (156)
251 KOG2615 Permease of the major 97.0 0.0055 1.2E-07 58.2 10.0 129 155-290 284-413 (451)
252 KOG0255 Synaptic vesicle trans 96.9 0.042 9.1E-07 56.3 16.5 127 186-321 369-498 (521)
253 PF06779 DUF1228: Protein of u 96.8 0.0094 2E-07 44.1 7.8 75 146-226 5-80 (85)
254 KOG1237 H+/oligopeptide sympor 96.7 0.015 3.2E-07 59.7 11.2 157 152-312 57-241 (571)
255 KOG3762 Predicted transporter 96.4 0.0014 3.1E-08 64.7 1.7 74 142-220 20-95 (618)
256 PRK03612 spermidine synthase; 96.4 0.22 4.7E-06 50.8 17.2 154 139-302 20-183 (521)
257 KOG3810 Micronutrient transpor 96.2 0.026 5.7E-07 53.0 8.8 121 189-319 64-186 (433)
258 KOG2563 Permease of the major 96.2 0.018 3.9E-07 56.0 7.5 182 130-319 263-453 (480)
259 PRK15462 dipeptide/tripeptide 96.1 0.38 8.2E-06 48.6 17.0 134 170-308 310-469 (493)
260 KOG3098 Uncharacterized conser 95.9 0.23 5E-06 49.3 14.1 151 130-286 237-409 (461)
261 KOG2816 Predicted transporter 95.8 0.055 1.2E-06 54.1 9.7 125 155-289 264-390 (463)
262 PF02487 CLN3: CLN3 protein; 95.8 0.096 2.1E-06 51.0 10.8 63 223-288 332-394 (402)
263 PF05631 DUF791: Protein of un 95.7 0.039 8.4E-07 52.4 7.6 54 382-435 62-115 (354)
264 TIGR00805 oat sodium-independe 95.2 0.096 2.1E-06 54.9 9.3 82 131-215 328-412 (633)
265 PF07672 MFS_Mycoplasma: Mycop 94.8 0.12 2.6E-06 46.8 7.6 101 258-367 2-107 (267)
266 KOG1330 Sugar transporter/spin 94.8 0.11 2.5E-06 50.8 7.9 155 138-295 249-417 (493)
267 KOG2325 Predicted transporter/ 94.8 0.072 1.6E-06 53.0 6.7 74 234-310 396-469 (488)
268 KOG3097 Predicted membrane pro 94.7 1.4 3E-05 41.5 14.1 44 385-428 306-349 (390)
269 TIGR00806 rfc RFC reduced fola 94.6 0.045 9.8E-07 54.3 4.6 80 356-436 29-109 (511)
270 PF03137 OATP: Organic Anion T 94.3 0.013 2.7E-07 60.0 0.0 156 131-291 303-514 (539)
271 PF06779 DUF1228: Protein of u 94.0 0.25 5.4E-06 36.6 6.4 55 381-435 19-73 (85)
272 PF03092 BT1: BT1 family; Int 93.8 0.22 4.7E-06 49.7 7.8 147 165-320 252-417 (433)
273 COG3104 PTR2 Dipeptide/tripept 92.3 3.1 6.7E-05 41.6 12.9 83 225-310 393-481 (498)
274 PF06963 FPN1: Ferroportin1 (F 90.6 2.8 6E-05 41.7 10.9 124 152-284 278-411 (432)
275 PF01770 Folate_carrier: Reduc 89.9 10 0.00022 37.3 13.9 96 169-268 286-382 (412)
276 PF07672 MFS_Mycoplasma: Mycop 88.5 6.8 0.00015 35.7 10.8 93 180-277 153-254 (267)
277 TIGR00880 2_A_01_02 Multidrug 88.4 2.2 4.7E-05 34.0 7.3 43 389-431 87-129 (141)
278 KOG3626 Organic anion transpor 88.3 1.4 3.1E-05 46.1 7.2 65 131-195 390-457 (735)
279 TIGR00939 2a57 Equilibrative N 86.2 38 0.00083 33.8 17.4 31 226-257 106-136 (437)
280 KOG4830 Predicted sugar transp 85.4 2.6 5.7E-05 38.3 6.3 123 134-259 202-326 (412)
281 TIGR00939 2a57 Equilibrative N 85.1 10 0.00023 37.8 11.2 58 225-285 371-428 (437)
282 PF13000 Acatn: Acetyl-coenzym 83.4 16 0.00034 36.8 11.2 62 230-294 409-470 (544)
283 KOG4332 Predicted sugar transp 82.7 1.2 2.6E-05 40.7 3.1 57 378-434 61-117 (454)
284 PF06813 Nodulin-like: Nodulin 82.5 3.5 7.6E-05 37.6 6.1 53 382-435 30-82 (250)
285 KOG4830 Predicted sugar transp 81.3 0.49 1.1E-05 42.8 0.1 75 138-214 22-104 (412)
286 KOG2601 Iron transporter [Inor 80.4 60 0.0013 31.6 14.1 165 138-307 32-217 (503)
287 COG2836 Uncharacterized conser 79.4 34 0.00073 30.4 10.6 85 349-434 125-212 (232)
288 KOG3880 Predicted small molecu 75.6 24 0.00051 33.3 9.0 135 171-319 65-203 (409)
289 PF06800 Sugar_transport: Suga 75.3 68 0.0015 29.6 15.1 21 394-414 167-187 (269)
290 KOG1479 Nucleoside transporter 72.4 1E+02 0.0022 30.3 13.7 29 228-256 119-147 (406)
291 COG1230 CzcD Co/Zn/Cd efflux s 71.9 88 0.0019 29.3 13.1 27 156-182 48-74 (296)
292 PF01733 Nucleoside_tran: Nucl 64.4 2.5 5.5E-05 40.0 0.4 56 227-285 249-304 (309)
293 COG5336 Uncharacterized protei 64.0 14 0.00031 28.4 4.2 25 184-212 59-83 (116)
294 COG1288 Predicted membrane pro 58.3 84 0.0018 31.0 9.3 37 276-312 199-236 (481)
295 KOG3880 Predicted small molecu 57.1 32 0.0007 32.4 6.1 63 222-287 338-400 (409)
296 KOG3810 Micronutrient transpor 51.2 2.4E+02 0.0052 27.4 11.6 117 184-310 288-415 (433)
297 PF13386 DsbD_2: Cytochrome C 50.4 1.7E+02 0.0037 25.4 12.4 45 387-431 148-195 (199)
298 PRK03612 spermidine synthase; 50.3 2.8E+02 0.0061 28.4 12.5 15 229-243 54-68 (521)
299 KOG3574 Acetyl-CoA transporter 50.2 55 0.0012 32.0 6.6 62 234-298 377-438 (510)
300 KOG1277 Endosomal membrane pro 49.8 1.2E+02 0.0026 30.0 8.9 34 170-204 325-360 (593)
301 TIGR02230 ATPase_gene1 F0F1-AT 49.6 71 0.0015 24.5 6.0 24 398-421 52-75 (100)
302 COG2119 Predicted membrane pro 48.8 1.8E+02 0.0038 25.1 12.3 40 396-435 141-180 (190)
303 COG4262 Predicted spermidine s 47.5 2.8E+02 0.006 27.0 13.8 28 226-253 105-132 (508)
304 COG4975 GlcU Putative glucose 47.4 1.5E+02 0.0033 26.9 8.5 20 394-413 181-200 (288)
305 PRK10263 DNA translocase FtsK; 45.9 1.3E+02 0.0028 34.3 9.5 10 184-193 65-74 (1355)
306 PRK00293 dipZ thiol:disulfide 45.7 3.7E+02 0.0081 28.0 16.5 16 387-402 323-338 (571)
307 PF07857 DUF1632: CEO family ( 44.1 79 0.0017 28.9 6.5 25 295-319 115-139 (254)
308 TIGR00769 AAA ADP/ATP carrier 42.3 3.8E+02 0.0082 27.1 17.7 72 233-307 273-345 (472)
309 PF13536 EmrE: Multidrug resis 41.1 69 0.0015 24.9 5.1 17 414-430 84-100 (113)
310 PF04226 Transgly_assoc: Trans 35.6 80 0.0017 20.5 3.8 14 295-308 25-38 (48)
311 COG0477 ProP Permeases of the 35.6 86 0.0019 28.1 5.7 39 389-427 39-77 (338)
312 PF01733 Nucleoside_tran: Nucl 35.2 13 0.00027 35.2 0.0 20 394-413 187-206 (309)
313 COG0861 TerC Membrane protein 34.4 3.7E+02 0.008 24.6 11.4 31 233-263 23-53 (254)
314 PF11345 DUF3147: Protein of u 34.3 2.2E+02 0.0048 22.1 7.9 33 275-307 65-98 (108)
315 PF05297 Herpes_LMP1: Herpesvi 34.3 13 0.00029 33.9 0.0 29 391-419 107-135 (381)
316 KOG1479 Nucleoside transporter 34.2 1.1E+02 0.0023 30.2 6.1 57 225-284 342-398 (406)
317 PF06912 DUF1275: Protein of u 33.8 3.2E+02 0.007 23.8 17.3 28 276-304 173-200 (209)
318 TIGR01666 YCCS hypothetical me 32.5 6.6E+02 0.014 27.0 12.1 58 184-243 40-98 (704)
319 KOG0637 Sucrose transporter an 32.3 1.1E+02 0.0023 30.7 5.7 101 184-293 349-472 (498)
320 COG5336 Uncharacterized protei 31.9 1E+02 0.0023 23.9 4.4 20 401-421 55-75 (116)
321 PF02694 UPF0060: Uncharacteri 31.5 1.3E+02 0.0027 23.4 4.8 43 388-430 53-95 (107)
322 TIGR01667 YCCS_YHJK integral m 31.4 6.6E+02 0.014 27.0 11.9 59 182-242 38-97 (701)
323 TIGR02230 ATPase_gene1 F0F1-AT 30.5 1.6E+02 0.0035 22.6 5.3 26 281-306 59-88 (100)
324 KOG1237 H+/oligopeptide sympor 29.3 3E+02 0.0064 28.7 8.8 60 227-289 459-518 (571)
325 PF03219 TLC: TLC ATP/ADP tran 28.0 6.6E+02 0.014 25.6 17.7 74 234-310 290-364 (491)
326 PF02990 EMP70: Endomembrane p 27.7 5.1E+02 0.011 26.6 10.1 34 165-198 290-325 (521)
327 PRK15015 carbon starvation pro 26.8 4.8E+02 0.01 27.5 9.4 23 276-302 99-122 (701)
328 PRK02237 hypothetical protein; 26.6 2E+02 0.0044 22.3 5.2 42 389-430 56-97 (109)
329 KOG2881 Predicted membrane pro 26.2 3E+02 0.0065 25.3 6.9 39 399-437 250-288 (294)
330 PF11511 RhodobacterPufX: Intr 25.4 1.9E+02 0.0042 20.2 4.4 32 291-322 27-59 (67)
331 COG3275 LytS Putative regulato 24.2 5.6E+02 0.012 25.9 8.9 16 178-193 17-34 (557)
332 PF04346 EutH: Ethanolamine ut 24.1 6.5E+02 0.014 24.2 15.4 119 170-299 49-170 (354)
333 KOG1307 K+-dependent Ca2+/Na+ 24.1 4.4E+02 0.0095 26.5 8.1 41 151-193 442-483 (588)
334 PF12805 FUSC-like: FUSC-like 23.1 4.7E+02 0.01 24.2 8.3 19 224-242 21-39 (284)
335 PRK10263 DNA translocase FtsK; 22.5 5.8E+02 0.013 29.5 9.7 20 275-294 62-81 (1355)
336 PF12273 RCR: Chitin synthesis 21.1 29 0.00064 28.0 -0.2 16 295-310 1-16 (130)
337 PRK11588 hypothetical protein; 20.9 9.1E+02 0.02 24.7 12.4 21 288-308 225-245 (506)
338 PF05978 UNC-93: Ion channel r 20.9 2.5E+02 0.0055 23.4 5.4 36 398-433 46-81 (156)
339 PF02667 SCFA_trans: Short cha 20.7 8.7E+02 0.019 24.4 9.9 18 177-194 68-87 (453)
340 PF08566 Pam17: Mitochondrial 20.6 2.8E+02 0.0062 23.6 5.5 26 163-188 72-99 (173)
No 1
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.96 E-value=7.4e-27 Score=233.91 Aligned_cols=314 Identities=37% Similarity=0.521 Sum_probs=240.0
Q ss_pred cCCCcccccccCCccHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhccccCcCCC
Q 013568 120 LSNGAKFFGVDLSPDNFAVAMVYFVQGVLGLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSLPLFGY 199 (440)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~~~~G~ 199 (440)
+.++++.+.........++...|+.+|+.++....+++++++++|++.++++.+.++..+++.++|++|+++||++++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~ 92 (468)
T TIGR00788 13 FLGYIPVFSFHPRVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGY 92 (468)
T ss_pred HhhccccccCCcchHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 33344444333333455677789999998888889999999989999999999999999999999999999999999998
Q ss_pred CcchhhhHHHHHHH-HHHHHHHhhhch-hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhH
Q 013568 200 RRRSYLVLSGLLGA-LSWSLMATIVES-KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFG 277 (440)
Q Consensus 200 ~rr~~l~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g 277 (440)
|||++++++.++.. ++...++ ..++ .....+++++.+++.+..+++..++..|..+ +++....++.+..+.+.++|
T Consensus 93 rRr~~l~~~~~l~~~~~~~~l~-~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G 170 (468)
T TIGR00788 93 TKRWYLVLSGLLGSAILYGLLP-GKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATG 170 (468)
T ss_pred cchHHHHHHHHHHHHHHHHhcc-cccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHH
Confidence 88998888876663 4433333 2233 3344457899999999999999999999999 66666667777777766689
Q ss_pred HHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCC-----CCCCccchhhHHHHHHHHHHhc
Q 013568 278 GIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLP-----LGDPSFFESSKQNMFQLWEAVK 352 (440)
Q Consensus 278 ~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~ 352 (440)
.++|+.++|++.+.++|+..|++.+++.++..+..++++|++.....+..+.. ....+..+..++..++.++.++
T Consensus 171 ~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 250 (468)
T TIGR00788 171 GLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQ 250 (468)
T ss_pred HHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999988887776666778886421111100000 0000111123444567778889
Q ss_pred CcchhhhHHHHHh-hhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 353 QPNVFLPTLFVFL-WQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 353 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
+|.++..+++.++ |.........++++..+.+|+++.++|.+..+.+++.++|..+.+++.+|++.|+++.++.++.++
T Consensus 251 ~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~ 330 (468)
T TIGR00788 251 LLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTL 330 (468)
T ss_pred cHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999998888888 766555555556666678999999999999999999999999999999999999999998888877
Q ss_pred Hhhh
Q 013568 432 LGMT 435 (440)
Q Consensus 432 ~~~~ 435 (440)
..+.
T Consensus 331 ~~~~ 334 (468)
T TIGR00788 331 SSLF 334 (468)
T ss_pred HHhC
Confidence 6544
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.4e-25 Score=212.77 Aligned_cols=271 Identities=17% Similarity=0.156 Sum_probs=221.5
Q ss_pred cHHHHHHHHHHHHHhh-hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVLG-LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+.+..|+.+... .....+|+ +.+++|+|..++|+..+++.+++.+ .|+...+.||+ .||++++....+
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-----~Rr~lLl~~l~l 87 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-----ERRRLLLGLLAL 87 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-----chHHHHHHHHHH
Confidence 5667778888888874 44445555 4555999999999999999999999 89999999995 699999999999
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc
Q 013568 212 GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA 291 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~ 291 (440)
+.++.++.+ ++++++.+++.|++.|+..|...+...++..++.|+++|+++.++...+.. ++.++|..++.++-+.
T Consensus 88 Fi~~n~l~a-lAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~t---lA~v~GvPLGt~ig~~ 163 (394)
T COG2814 88 FIVSNLLSA-LAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLT---LATVLGVPLGTFLGQL 163 (394)
T ss_pred HHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHH---HHHHHhccHHHHHHHH
Confidence 999999888 899999999999999999999999999999999999999999999988888 9999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc
Q 013568 292 YGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP 370 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~ 370 (440)
+|||+.|+..++++++.++ .+..+| +...++. .....++..+.+|+|.++...+..++...
T Consensus 164 ~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~--------------~~~~~~~~~~~l~~p~v~~~l~~t~l~~~-- 225 (394)
T COG2814 164 FGWRATFLAIAVLALLALLLLWKLLP--PSEISGS--------------LPGPLRTLLRLLRRPGVLLGLLATFLFMT-- 225 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCC--------------CCcchhHHHHHhcCchHHHHHHHHHHHHc--
Confidence 9999999999999988777 556778 1111111 11233456688999999888776666544
Q ss_pred cccceeee----eeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhh
Q 013568 371 HSDSAMFY----FTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGM 434 (440)
Q Consensus 371 ~~~~~~~~----~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~ 434 (440)
.....|. +..+..|++...++++...++++.++|..++|++.|| +.|+.+.....+.++..+
T Consensus 226 -g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l 291 (394)
T COG2814 226 -GHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALL 291 (394)
T ss_pred -chhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHH
Confidence 2222222 2337889999999999999999999999999999999 777777776555544433
No 3
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3.1e-25 Score=207.83 Aligned_cols=292 Identities=14% Similarity=0.092 Sum_probs=222.1
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+.++|...++. -.+..+.|..++| .++|.++.|.+.+++.+.|.+ +.+.|.++||. +.|.++.+++++
T Consensus 30 if~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-----npr~fm~~gLil 103 (448)
T COG2271 30 IFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-----NPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-----CCceeehHHHHH
Confidence 456677888877776 5777677766665 789999999999999999999 88999999993 588899999999
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH--HHhh
Q 013568 212 GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS--GSMV 289 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~--g~l~ 289 (440)
.+++.++++ +.++...+.++.++.|++.|.-.+++...+..++++++||+..++++.+.. +|+.+.|++. +++.
T Consensus 104 sai~nil~G-fs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shN---iGGal~~~~~~la~~~ 179 (448)
T COG2271 104 SAIVNILFG-FSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHN---IGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHh-hhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhh---cccchHHHHHHHHHHH
Confidence 999999999 777888999999999999999999999999999999999999999987777 9999999999 8898
Q ss_pred hccchHHHHHHHHHHHHHHHH-hheeeccccccCCCcC----CCCCCCC-Cccchhh-HHHHHH-HHHHhcCcchhhhHH
Q 013568 290 DAYGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRR----QNLPLGD-PSFFESS-KQNMFQ-LWEAVKQPNVFLPTL 361 (440)
Q Consensus 290 ~~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~----~~~~~~~-~~~~~~~-~~~~~~-~~~~l~~~~~~~~~l 361 (440)
.+.+||..|++.++++++..+ .++..+++|...-... +++..+. ++..+.. ...++. ..-+++||.+|.+++
T Consensus 180 ~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~ 259 (448)
T COG2271 180 FHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLAL 259 (448)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHH
Confidence 888999999999998887666 4556777665311100 0000000 0000110 111122 334689999998874
Q ss_pred -HHHhhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC--CchhHHHHHHHHHHHHhhh
Q 013568 362 -FVFLWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNV--PLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 362 -~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~--g~r~~l~~~~~~~~~~~~~ 435 (440)
.+++|..-+....-.+.|+.+..|++...++.....+-++.+.|.+++||++||+ |||...-+...+...++++
T Consensus 260 a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~ 336 (448)
T COG2271 260 ANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLV 336 (448)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 4444555333344445566689999999999999999999999999999999996 5666655544444444433
No 4
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.93 E-value=1e-23 Score=212.77 Aligned_cols=280 Identities=17% Similarity=0.211 Sum_probs=207.6
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhcccc--CcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSL--PLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~--~~~G~~rr~~l~~~~~ 210 (440)
+.+.+++.++.++.. ......+|.++++ .|.+..++|.. +....++..++++|+++||+ +++| |||++++.+.+
T Consensus 13 ~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~-~~~~~~~~~~~l~gpl~Dr~~~~~~G-rrr~~ll~~~i 89 (491)
T PRK11010 13 NSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFF-SLVGQAYVFKFLWSPLMDRYTPPFLG-RRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHH-HHHHHHHHHHHHHHHHHHcccccCCC-CchHHHHHHHH
Confidence 566788888888887 6777788999888 59999999986 66667777799999999996 4558 77778888888
Q ss_pred HHHHHHHHHHhhh--chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 211 LGALSWSLMATIV--ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 211 ~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
+.+++...+++.. .+.+.+.+.+++.+++.+...+...++..|++|+++|+++.++...++. +|.++++.+++++
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~---lG~llg~~l~~~l 166 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYR---LAMLVSGGLALWL 166 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 8877776666332 3566777888999999999999999999999999999999999988887 9999999999999
Q ss_pred hh-ccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhh
Q 013568 289 VD-AYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQ 367 (440)
Q Consensus 289 ~~-~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 367 (440)
.+ ..|||..|++.+++.++..+..+++||++...+. ++. ..+...+.+++.++++..|...+..+++.
T Consensus 167 ~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~-~~~----------~~~~~~~~l~~~~~~~~~~~~ll~~~l~~ 235 (491)
T PRK11010 167 ADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPV-PKT----------LEQAVVAPLRDFFGRNNAWLILLLIVLYK 235 (491)
T ss_pred HhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccc-ccc----------hhhhHHHHHHHHHcCcCHHHHHHHHHHHH
Confidence 88 5799999999998877766655567775432111 000 00111234556667777666554444443
Q ss_pred ccccc-cceeeeeeeccCCCChhhHHHHHH-HHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q 013568 368 ATPHS-DSAMFYFTTNELGFTPEFLGRVKF-VTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGT 430 (440)
Q Consensus 368 ~~~~~-~~~~~~~~~~~~g~s~~~~g~~~~-~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~ 430 (440)
..... ......++.+++|+++.+++.+.. ...++.++|.++++++.||+++|+.++.+.++.+
T Consensus 236 ~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~ 300 (491)
T PRK11010 236 LGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQG 300 (491)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 32111 111223334568999999999874 5567999999999999999999887776554433
No 5
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.92 E-value=1.4e-23 Score=207.15 Aligned_cols=276 Identities=18% Similarity=0.217 Sum_probs=203.3
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhcccc--CcCCCCcchhhhHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSL--PLFGYRRRSYLVLSGLLGAL 214 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~--~~~G~~rr~~l~~~~~~~~~ 214 (440)
+...|+.+++. +.....+|.|++++ |+|.+++|++ .....++.++|++|+++||+ +.+| |||+++.++.++.++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~-~~~~~~~~~~~l~g~~~Dr~~~~~~g-~rr~~l~~~~~~~~l 80 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFF-SLVGQAYIFKFLWAPLMDRYTPPLLG-RRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHH-HHHHHHHHHHHHHHHHHHcccccCCC-cchhHHHHHHHHHHH
Confidence 56778999997 78899999999995 9999999998 44445577799999999996 2237 777888888888877
Q ss_pred HHHHHHhhh--chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc-
Q 013568 215 SWSLMATIV--ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA- 291 (440)
Q Consensus 215 ~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~- 291 (440)
+...++... .+.+.+.+..++.+++.+...++.++++.|+.|+++|++++++...++. +|.++++.+++++.+.
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~---~g~i~g~~l~~~l~~~~ 157 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYR---LAMLVSGGLALWLADRV 157 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHH---HHHHHHhHHHHHHHhcc
Confidence 777666332 2355566666777888888999999999999999999999999988777 9999999999998885
Q ss_pred cchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc
Q 013568 292 YGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH 371 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 371 (440)
+|||..|++.+++.++..+..+++||++..+++++ +..++..++.++++++|.++..++..+++.....
T Consensus 158 ~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~-----------~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~ 226 (402)
T PRK11902 158 LGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPR-----------SLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDA 226 (402)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc-----------hhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHH
Confidence 59999999988877666555556676543211110 0111233456677889988776665555443111
Q ss_pred c-cceeeeeeeccCCCChhhHHHHHHHHH-HHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q 013568 372 S-DSAMFYFTTNELGFTPEFLGRVKFVTS-VASLLGVGLYNGFLKNVPLRKIFLANTIFGT 430 (440)
Q Consensus 372 ~-~~~~~~~~~~~~g~s~~~~g~~~~~~~-i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~ 430 (440)
. .....++..+++|+++.++|++....+ ++.++|.++++++.||+++|+.+..+.++.+
T Consensus 227 ~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~ 287 (402)
T PRK11902 227 FAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQA 287 (402)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 1 111122334668999999999886654 4689999999999999999888766555443
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.92 E-value=1.3e-23 Score=206.53 Aligned_cols=244 Identities=14% Similarity=0.073 Sum_probs=187.2
Q ss_pred HHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHH
Q 013568 154 AVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALS 232 (440)
Q Consensus 154 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (440)
.+|. +.+++|++..+.|++.+.+.+++.+ ++++|+++|| +| ||+++..+.++..++.+.++ +.++++.++++
T Consensus 31 ~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr---~g--~r~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 103 (390)
T PRK03545 31 LLSD-IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN---VE--RRKLLIGLFVLFIASHVLSA-LAWNFTVLLIS 103 (390)
T ss_pred chHH-HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CC--hHHHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 3454 5556999999999999999999887 7888999999 45 78888888888888877777 78899999999
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHh-
Q 013568 233 ILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGV- 311 (440)
Q Consensus 233 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~- 311 (440)
|++.|++.+...+...+++.|++|+++|+++.+++..+.. +|..+||.+++.+.+.+|||+.|++.+++.++..+.
T Consensus 104 r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~---~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 104 RIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTA---LAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHH---HHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888999999999999999999999888777 999999999999999999999999998877666553
Q ss_pred heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc-cccceeeeeeeccCCCChhh
Q 013568 312 AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP-HSDSAMFYFTTNELGFTPEF 390 (440)
Q Consensus 312 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~ 390 (440)
..++||+++++ + ...++..+.+++|.++...+..++..... ........+..+..|+++.+
T Consensus 181 ~~~~~~~~~~~----~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 242 (390)
T PRK03545 181 IKLLPLLPSEH----S--------------GSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENF 242 (390)
T ss_pred HHhCCCCCCCC----c--------------chHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccH
Confidence 33455532210 0 11234556788888765443333322111 01111222334567999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHH
Q 013568 391 LGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLAN 425 (440)
Q Consensus 391 ~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~ 425 (440)
++.+....+++.+++.++.+++.||+++|......
T Consensus 243 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~ 277 (390)
T PRK03545 243 ATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAI 277 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Confidence 99999999999999999999999999987654443
No 7
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=2.5e-23 Score=201.97 Aligned_cols=277 Identities=14% Similarity=0.165 Sum_probs=201.9
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
+....+...+. +.....+|.+..+ ++.+..+.+++.++..++..+ +|++|+++|| +| ||+.++.+.++..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr---~g--~r~~~~~~~~~~~~~ 77 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADR---YD--RKKVMIGADLIRAVL 77 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHh---hc--hhHHHHHHHHHHHHH
Confidence 34445555555 5666677777776 799999999999999999888 8999999999 45 777777777766666
Q ss_pred HHHHHhhhc-----hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 216 WSLMATIVE-----SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 216 ~~~~~~~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
.+++. ... +.+.+++.|++.|++.+...+...+++.|++|+++|++..++.+.... +|.++||.+++++.+
T Consensus 78 ~~~~~-~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~l~~~l~~ 153 (365)
T TIGR00900 78 VAVLP-FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRS---LFYIVGPGIGGLMYA 153 (365)
T ss_pred HHHHH-HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHH---HHHHHHHHHHHHHHH
Confidence 55555 344 788889999999999999999999999999999999999999988888 999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc
Q 013568 291 AYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP 370 (440)
Q Consensus 291 ~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~ 370 (440)
..||++.|++.++..++..+..+++++++..++++++. ++ +..++..+..+..+++|.++..++..+++....
T Consensus 154 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (365)
T TIGR00900 154 TLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQAL---SN----AVLRDTREGIKFVLKNPLLRTLLLLALLFNLVF 226 (365)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhcccccCCCcccccc---ch----hHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 99999999998876666555443333222111111100 00 111223334556678888777665555444322
Q ss_pred c-cc-ceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 371 H-SD-SAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 371 ~-~~-~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
. .. ....++..+.+|.++.+.+.+....+++.+++.++.+++.||+++|+.+..+.++.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 227 APAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHH
Confidence 1 11 2233444345899999999999999999999999999999999999888765544433
No 8
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.92 E-value=3.2e-23 Score=203.01 Aligned_cols=270 Identities=15% Similarity=0.122 Sum_probs=202.0
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
+.+..+...+. ......+|.+. +++|.+..+.+++.+++.+++.+ ++++|+++|| +| ||+++..+.++..++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~---~g--~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEIA-ADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR---YG--RRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh---cC--ChHHHHHHHHHHHHH
Confidence 33344444454 45555555554 55899999999999999999888 8899999999 45 788888888888887
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchH
Q 013568 216 WSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVR 295 (440)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~ 295 (440)
.+.+. ..++.+.+.+.|++.|++.+...+...+++.|++|+++|++..++.+.... +|..+++.+++++.+..|||
T Consensus 84 ~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~l~~~~~~~ 159 (385)
T TIGR00710 84 SLGLA-LSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLA---LAPAVAPLLGGYILVWLSWH 159 (385)
T ss_pred HHHHH-HHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHcCHH
Confidence 77776 678888899999999999999999999999999999999999988887777 99999999999999989999
Q ss_pred HHHHHHHHHHHHHHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhc-ccccc
Q 013568 296 FVFGVTALLPLITSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQA-TPHSD 373 (440)
Q Consensus 296 ~~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~~ 373 (440)
+.|++.+++.++..+. .++.||++..+++ +..++..+..++.+++|+++...+...+... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (385)
T TIGR00710 160 AIFAFLSLAGILLSALIFFILPETLPYEAR-------------IQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFF 226 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccc-------------CCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 9999988777666553 4455665432111 0112334456677888887765543333221 11111
Q ss_pred ceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q 013568 374 SAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGT 430 (440)
Q Consensus 374 ~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~ 430 (440)
...++++.+.+|+++.+.+.+.....++.+++.++.+++.||+++|+.+..+.++..
T Consensus 227 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 283 (385)
T TIGR00710 227 SGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFA 283 (385)
T ss_pred HcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 222333445789999999999999999999999999999999999988776654443
No 9
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.91 E-value=6.8e-23 Score=202.76 Aligned_cols=289 Identities=40% Similarity=0.732 Sum_probs=231.4
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhc---hh
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVE---SK 226 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~---~~ 226 (440)
+......+++++++|+++++...+.++..+++.++|++|.++|.+|++|+|||++++++.++..++...++.... +.
T Consensus 7 l~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 7 LSRLAIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 566678889999999999999999999999999999999999999999999999999999888766666663433 45
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHH
Q 013568 227 YSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPL 306 (440)
Q Consensus 227 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~ 306 (440)
....++.++..+|.+..+.+..+++.|...++... +..+.+..+...++|.+++..++|.+.+..++++.|.+.+++..
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPL 165 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHH
Confidence 56677788999999999999999999999887765 66777777777789999999999999999999999999988887
Q ss_pred HHHHhheeeccccccCCCcCCC-CCCC-CCccchhhHHHHHHHHHHhcCcchhhhHH-HHHhhhccccccce-eeeeeec
Q 013568 307 ITSGVAVLVKEQQVLGPSRRQN-LPLG-DPSFFESSKQNMFQLWEAVKQPNVFLPTL-FVFLWQATPHSDSA-MFYFTTN 382 (440)
Q Consensus 307 ~~~~~~~~~~e~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~l-~~~~~~~~~~~~~~-~~~~~~~ 382 (440)
+..+..+++.|++...+..+.. ...+ .+......++..++.++.+++|.+|...+ +.+++........+ .+|+.++
T Consensus 166 l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~ 245 (433)
T PF03092_consen 166 LMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTD 245 (433)
T ss_pred HHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEec
Confidence 7766555555542221111100 0000 01111225677888999999999999888 77777776655556 6777777
Q ss_pred cCC---CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhhhhhc
Q 013568 383 ELG---FTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMTQVCI 439 (440)
Q Consensus 383 ~~g---~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~~l~~ 439 (440)
..+ +++...|.+..+..++.++|..++.++..++..|+++.++.++.++..+..+++
T Consensus 246 ~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~l 305 (433)
T PF03092_consen 246 ALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLL 305 (433)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEE
Confidence 788 999999999999999999999999999999999999999998888877766543
No 10
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=4.7e-23 Score=202.01 Aligned_cols=270 Identities=10% Similarity=0.072 Sum_probs=201.7
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+.+..+..+.. ......+|.+. +++|++.++.|++.+.+.+++.+ ++++|+++|| +| ||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr---~g--~r~~~~~~~~~ 77 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELA-HDVGISIPAAGHMISYYALGVVVGAPIIALFSSR---YS--LKHILLFLVAL 77 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHH-HHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc---Cc--cHHHHHHHHHH
Confidence 456667777777776 45555666554 55899999999999999999988 8999999999 45 88888888888
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc
Q 013568 212 GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA 291 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~ 291 (440)
..++.++++ ++++++.+++.|++.|++.+...+....++.|+.++++|++..++...+.. +|..+++.+++++.+.
T Consensus 78 ~~~~~~l~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~l~~~l~~~ 153 (382)
T PRK10091 78 CVIGNAMFT-LSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMT---VANLLGIPLGTYLSQE 153 (382)
T ss_pred HHHHHHHHH-HhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHH---HHHHHhccHHHHHhhh
Confidence 888887777 788999999999999999998888888899999999999988888776666 9999999999999988
Q ss_pred cchHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhc-c
Q 013568 292 YGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQA-T 369 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~ 369 (440)
.|||+.|++.+++.++..+ ..+++||.++++ +. ..+ +..+.++++..|......++... .
T Consensus 154 ~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~---~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (382)
T PRK10091 154 FSWRYTFLLIAVFNIAVLASIYFWVPDIRDEA---KG-----------GLR----EQFHFLRSPAPWLIFAATMFGNAGV 215 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCccc---cc-----------CHH----HHHHHhcChHHHHHHHHHHHHHHHH
Confidence 9999999998887666554 344566643210 00 111 12345677776655433332211 0
Q ss_pred ccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 370 PHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 370 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
.........++.+.+|+++.+.+++....+++.+++.++.+++.||+++|+.+..+..+.++
T Consensus 216 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i 277 (382)
T PRK10091 216 FAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVL 277 (382)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHH
Confidence 00011111223356899999999999999999999999999999999999888776655443
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=6.4e-23 Score=202.91 Aligned_cols=277 Identities=11% Similarity=0.058 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
++.+++.+++++++ .......+ .+++++|++..+.|++.+++.+++++ +++.|+++|| +| ||+.+..+.++.
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr---~G--~r~~~~~~~~~~ 83 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI---IG--ARRWIAGIMVLW 83 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH---hC--hHHHHHHHHHHH
Confidence 44566677777776 44544444 67777999999999999999999988 8899999999 45 777888888888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh--
Q 013568 213 ALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD-- 290 (440)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~-- 290 (440)
.++.++.+ ++++.+.+++.|++.|++.+...+....++.|++|+++|+++.++++.+.. +|.++++.+++++.+
T Consensus 84 ~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~---~g~~~~~~~~~~l~~~~ 159 (412)
T TIGR02332 84 GIASTATM-FATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMP---VTMALGLILSGYILALD 159 (412)
T ss_pred HHHHHHHH-HhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhCC
Confidence 88887777 788899999999999999999888888999999999999999999988877 999999999998864
Q ss_pred ----ccchHHHHHHHHHHHHHHHH-hheeeccccccCC---CcCCC--------C--CCCC-CccchhhHHHHHHHHHHh
Q 013568 291 ----AYGVRFVFGVTALLPLITSG-VAVLVKEQQVLGP---SRRQN--------L--PLGD-PSFFESSKQNMFQLWEAV 351 (440)
Q Consensus 291 ----~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~---~~~~~--------~--~~~~-~~~~~~~~~~~~~~~~~l 351 (440)
..|||+.|++.++..++..+ .++++||++.... +++++ . ..+. ++..+..+...++.++.+
T Consensus 160 ~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (412)
T TIGR02332 160 GLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI 239 (412)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHh
Confidence 36999999998887766544 5567788764311 00000 0 0000 000000000111222334
Q ss_pred cCcchhhhHHHHHhhhccccc-cceeeeeeec-cCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhH
Q 013568 352 KQPNVFLPTLFVFLWQATPHS-DSAMFYFTTN-ELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKI 421 (440)
Q Consensus 352 ~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~-~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~ 421 (440)
++|.+|...+..++....... ....+.++.+ ..|++..+.+.+.....++.++|.++.+++.||+++|+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~ 311 (412)
T TIGR02332 240 FTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH 311 (412)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH
Confidence 456666555433332221111 1112233323 347788888999999999999999999999999987764
No 12
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.91 E-value=1.1e-22 Score=206.08 Aligned_cols=285 Identities=14% Similarity=0.021 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
+..+++.++...++ .+....+|.+.++ +|.+..+.+|+.+.+.+++.+ ++++|+++|| +| ||+.++.+.++.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~---~G--rk~~l~~~~~~~ 81 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDR---IG--FKRLLMLGGTLF 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--cHHHHHHHHHHH
Confidence 44677777888887 6777788877665 899999999999999999887 8999999999 45 888888988888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhh-cccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc
Q 013568 213 ALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERA-RGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA 291 (440)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~ 291 (440)
.++.+.++ .+++.+.++++|+++|++.+...+.....+.+.+ |+++|+++.+++..... +|..+||.++|++.++
T Consensus 82 ~~~~~~~~-~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~---~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 82 GLASLAAA-FSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGS---GGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhcc
Confidence 88888877 7899999999999999999998887777777765 67889999999888877 9999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCC------------------CCccchhhH-----------
Q 013568 292 YGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLG------------------DPSFFESSK----------- 341 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~------------------~~~~~~~~~----------- 341 (440)
.||||.|++...+.++.++ ..+++|+++.+++++ .+... .+.......
T Consensus 158 ~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~--~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (495)
T PRK14995 158 FYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQP--LNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALL 235 (495)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Confidence 9999999998877666555 444566654321111 00000 000000000
Q ss_pred ---HHHHH--------HHHHhcCcchhhhHHHHHhhhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHH
Q 013568 342 ---QNMFQ--------LWEAVKQPNVFLPTLFVFLWQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLY 409 (440)
Q Consensus 342 ---~~~~~--------~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~ 409 (440)
....+ ..+++|+|.++...+..++...... .......++.+.+|+++.++|+...+..++..++..+.
T Consensus 236 l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~ 315 (495)
T PRK14995 236 LGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIA 315 (495)
T ss_pred HHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001 1256677776555444443322110 11111223335689999999999999999999999999
Q ss_pred HHhhccCCchhHHHHHHHHHHH
Q 013568 410 NGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 410 ~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
|++.||+|+|+.+..+.++.++
T Consensus 316 g~l~~r~g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 316 GILVSRLGLRLVATGGMALSAL 337 (495)
T ss_pred HHHHHHcCchHHHHHHHHHHHH
Confidence 9999999998887766655443
No 13
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=9.8e-23 Score=200.84 Aligned_cols=285 Identities=12% Similarity=0.137 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
+..+++.++..++. .......+. +++++|++..+.+++.+++.+++.+ +++.|+++|| +| ||+.++.+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr---~g--~r~~~~~~~~~~ 87 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDR---YG--RRLPMVTSIVLF 87 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH---hc--cHHHHHHHHHHH
Confidence 44566777777776 445544554 5566899999999999999999888 8999999999 45 777777887777
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc
Q 013568 213 ALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY 292 (440)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~ 292 (440)
+++.+++. +.++++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+.. +|.++++.+++.+.+..
T Consensus 88 ~~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 88 SAGTLACG-FAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYA---VGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHH-HhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHH---HHHHHHHHHHHHHHHhc
Confidence 77777776 678889999999999999999999999999999999999999999988877 99999999999988776
Q ss_pred c--hHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCC--Ccc---chhhHHHHH----HHHHHhcC-cc-hhhh
Q 013568 293 G--VRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGD--PSF---FESSKQNMF----QLWEAVKQ-PN-VFLP 359 (440)
Q Consensus 293 g--w~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~----~~~~~l~~-~~-~~~~ 359 (440)
+ ||+.|++.++..++..+....+||++..++.+++++...+ +.. .+..+...+ ..++..+. +. +...
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYL 243 (405)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHH
Confidence 6 9999998776665555555567776532211111000000 000 000000001 11111111 11 1111
Q ss_pred HHHHHhhhccc-cccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHH
Q 013568 360 TLFVFLWQATP-HSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFG 429 (440)
Q Consensus 360 ~l~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~ 429 (440)
.+...+..... .....++.+..+++|+++.+.+.+....+++.+++.++.+++.||+++|+.+..+.++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~ 314 (405)
T TIGR00891 244 VVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAG 314 (405)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHH
Confidence 11111111111 11122233344578999999999999999999999999999999999999887766544
No 14
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.91 E-value=8.2e-23 Score=199.83 Aligned_cols=260 Identities=16% Similarity=0.131 Sum_probs=198.1
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
+...+.+|.+.++ +|++..+.+++.+++.++..+ ++++|+++|| +| ||+++..+.++..++...+. ..++.+
T Consensus 8 ~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~g--~~~~~~~~~~~~~i~~~~~~-~~~~~~ 80 (377)
T PRK11102 8 DMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADS---FG--RKPVILGGTLVFALAAVACA-LAQTID 80 (377)
T ss_pred HHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh---cC--ChHHHHHHHHHHHHHHHHHH-HHccHH
Confidence 3445567777766 899999999999999999888 7899999999 44 78888888888888877776 678888
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.+++.+++.|++.+...+...+++.|++++++|++..++...... +|..++|.+++.+.+.+||++.|++.+++.++
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 157 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMT---IAPLLAPIIGGWLLVWFSWHAIFWVLALAAIL 157 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999988887777 99999999999999989999999998877766
Q ss_pred HHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcc-ccccceeeeeeeccCC
Q 013568 308 TSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQAT-PHSDSAMFYFTTNELG 385 (440)
Q Consensus 308 ~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~g 385 (440)
..+ ..+++||+++.+++++ ...++..++.++.+++|.++..++..++.... ........+++.+.+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 226 (377)
T PRK11102 158 AAALVFFFIPETLPKERRQP-----------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNG 226 (377)
T ss_pred HHHHHHHhCCccCcccccCC-----------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhC
Confidence 655 4456666543211110 01122334556678888776655433332211 1111111223335689
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHH
Q 013568 386 FTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFG 429 (440)
Q Consensus 386 ~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~ 429 (440)
+++.+.|.+.....++.+++.++.+++.||+|+|+.+..+..+.
T Consensus 227 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~ 270 (377)
T PRK11102 227 VSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQ 270 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887766543
No 15
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=8.9e-23 Score=198.85 Aligned_cols=259 Identities=17% Similarity=0.185 Sum_probs=188.3
Q ss_pred HHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHH
Q 013568 154 AVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALS 232 (440)
Q Consensus 154 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (440)
.+.+++++++|++..+.|++.+++.+++.+ +|++|+++|| +| ||+.+..+.++..++.+.++ ++++.+.++++
T Consensus 24 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~---~G--~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 97 (377)
T TIGR00890 24 LLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK---FG--PRAVAMLGGILYGLGFTFYA-IADSLAALYLT 97 (377)
T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH---cC--ccchhHHhHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 445556667999999999999999999988 8999999999 46 77777788888888877777 77889999999
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHh-
Q 013568 233 ILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGV- 311 (440)
Q Consensus 233 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~- 311 (440)
|++.|++.+...+.....+.++++ ++|+++.++...+.. +|.++++.+.+.+.+..|||+.|++.+++.++..+.
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 98 YGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYG---LGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcc---hhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 999999999877777778888886 568888888887777 888877777777777889999999998887776654
Q ss_pred heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccccccceeeeeeeccCCCChhhH
Q 013568 312 AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEFL 391 (440)
Q Consensus 312 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 391 (440)
.++++++++++..++.+ .++..++.++.+++|.++...+..++..........+...+.+++|.++.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (377)
T TIGR00890 174 AFLIGYPPGQLIKTNIE-----------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFL 242 (377)
T ss_pred HHheecCchhccccCcc-----------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 44555544321111100 0111123456778888776654444433211111111111225678888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHh
Q 013568 392 GRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 392 g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~ 433 (440)
+.+.....++.+++.++.+++.||+++|+.+..+.++.++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 243 VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Confidence 999999999999999999999999999998877665554443
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.91 E-value=1.1e-22 Score=202.78 Aligned_cols=270 Identities=11% Similarity=0.090 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHH
Q 013568 137 AVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGAL 214 (440)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~ 214 (440)
..++.+++..+. ......+|.+.++ +|++..+.|++.+.+.+++.+ +++.|+++|| +| ||+++.++.++..+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr---~g--~r~~~~~~~~~~~~ 100 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDR---SN--ARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh---cC--CchhHHHHHHHHHH
Confidence 445555555554 4556666766665 899999999999999999988 8899999999 45 77788888888888
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccch
Q 013568 215 SWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGV 294 (440)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw 294 (440)
+.++++ ..++++.+++.|++.|++.+...+...+++.|++++++|++++++++.+.. +|.++++.+++++.+.+||
T Consensus 101 ~~~~~~-~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~---~g~~~~~~~~~~l~~~~gw 176 (434)
T PRK11663 101 INILFG-FSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHN---VGGALIPLVVGAIALHYGW 176 (434)
T ss_pred HHHHHH-HHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHcccH
Confidence 877776 678888888999999999998888899999999999999999999888777 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCC----CCCccchhhHHHHHHHH--HHhcCcchhhhHHHHHhhh
Q 013568 295 RFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPL----GDPSFFESSKQNMFQLW--EAVKQPNVFLPTLFVFLWQ 367 (440)
Q Consensus 295 ~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~ 367 (440)
|+.|++.+++.++..+ ..++++|++.........++. +.....+..+...++.. ..+++|.+|.+.+..++..
T Consensus 177 ~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
T PRK11663 177 RYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVY 256 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHH
Confidence 9999998877665443 445667665321100000000 00000000001112221 2567888777655444332
Q ss_pred ccccccc-eeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 013568 368 ATPHSDS-AMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNV 416 (440)
Q Consensus 368 ~~~~~~~-~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~ 416 (440)
....... ..+.+..+++|++..+.+.......++.++|.++.+++.||+
T Consensus 257 ~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~ 306 (434)
T PRK11663 257 VVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKL 306 (434)
T ss_pred HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 2111111 123334467899999999999999999999999999999998
No 17
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.91 E-value=1.3e-22 Score=196.96 Aligned_cols=266 Identities=20% Similarity=0.244 Sum_probs=186.2
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhcccc--CcCCCCcchhhhHHHHHHHHHHHHHHhhh--ch
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSL--PLFGYRRRSYLVLSGLLGALSWSLMATIV--ES 225 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~--~~~G~~rr~~l~~~~~~~~~~~~~~~~~~--~~ 225 (440)
.....+|.+++| +|+|.+++|++... .+++.+++++|+++||+ +++| |||++++.+.++.+++..++++.. .+
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~~~~~g~~~Dr~~~~~~G-rr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSLKFLWSPLVDTVYLPFFG-RRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHHHHHHHHHHhcccCCCCC-ccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 344566777776 79999999998544 67776799999999997 3468 777777777777777766665232 23
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc--------hHHH
Q 013568 226 KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG--------VRFV 297 (440)
Q Consensus 226 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g--------w~~~ 297 (440)
.+.+....++.+++.+...++..+++.|++|+++|+++.++...+.. +|.++++.+++.+.+..| ||..
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~---~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYR---AGMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHH---HHHHHHHHHHHHHhhhcccccccccccHHH
Confidence 44456666778888888999999999999999999999999888877 999999999999988888 9999
Q ss_pred HHHHHHHHHHHHHhhe-eeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcc---hhhhHHHHHhhhccccc-
Q 013568 298 FGVTALLPLITSGVAV-LVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPN---VFLPTLFVFLWQATPHS- 372 (440)
Q Consensus 298 f~i~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~l~~~~~~~~~~~- 372 (440)
|++.+++.++..+..+ ..||++..++. ++ +..++.....++++++|. ++...+..+++......
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEPQEDASV-PK----------PLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAA 228 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCccccc-ch----------hHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 9999887776655444 34554321110 00 011122233445566664 55544444444332211
Q ss_pred cceeeeeeeccCCCChhhHHHHHHHHH-HHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHh
Q 013568 373 DSAMFYFTTNELGFTPEFLGRVKFVTS-VASLLGVGLYNGFLKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 373 ~~~~~~~~~~~~g~s~~~~g~~~~~~~-i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~ 433 (440)
.....++.. ++|+++.+++.+....+ ++.++|.++++++.||+|+|+.++.+.++.++..
T Consensus 229 ~~~~~~~l~-~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~ 289 (356)
T TIGR00901 229 TVLTTLFLL-DMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTN 289 (356)
T ss_pred HHHHHHHHH-HcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 222233333 48999999998887665 5788999999999999999888877766655443
No 18
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=1.1e-22 Score=202.42 Aligned_cols=285 Identities=16% Similarity=0.208 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHH
Q 013568 135 NFAVAMVYFVQGVLGLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGA 213 (440)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~ 213 (440)
+..+.+.++..++.........+.+++++|++..+.+++.+++.+++.+ ++++|+++|| +| ||+.++.+.++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr---~g--~r~~l~~~~~~~~ 94 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK---FG--RKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--ChHHHHHHHHHHH
Confidence 4455566666666633334444556666999999999999999999988 8899999999 45 8888888888888
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc
Q 013568 214 LSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG 293 (440)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g 293 (440)
++.++.+ +.++.+.++++|++.|++.+...+....++.|++|+++|+++.++...+.. +|.++++.+.+.+.+.+|
T Consensus 95 ~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---lg~~~~~~l~~~l~~~~~ 170 (426)
T PRK12307 95 VGTGLSG-LASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFG---IGNIIAAYFMPSFAEAYG 170 (426)
T ss_pred HHHHHHH-HHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHh---HHHHHHHHHHHHHcccCC
Confidence 8877777 678889999999999999999999999999999999999999999888777 999999999999988899
Q ss_pred hHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHh-hhc--cc
Q 013568 294 VRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFL-WQA--TP 370 (440)
Q Consensus 294 w~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~-~~~--~~ 370 (440)
||+.|++..+..++........||++...+.+.+......+ ...+......++.+++|.++...+.... +.. ..
T Consensus 171 w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (426)
T PRK12307 171 WRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKGKHSQ---SAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGAN 247 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccccccc---cchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Confidence 99999886544333222222334433211110000000000 0001111234566777766543321111 111 00
Q ss_pred c-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q 013568 371 H-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTAL 432 (440)
Q Consensus 371 ~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~ 432 (440)
. .......+. ++.|+++...+.......++.+++.++.+++.||+++|+.+..+.++.++.
T Consensus 248 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~ 309 (426)
T PRK12307 248 WPIFGLLPTYL-AGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLF 309 (426)
T ss_pred HHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 0 011112222 356899989999888899999999999999999999999887776554443
No 19
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.90 E-value=1.6e-22 Score=196.92 Aligned_cols=283 Identities=15% Similarity=0.100 Sum_probs=193.2
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++..++.++..... ......+|.++++++|+|..+.+++.++..+++.+ ++++|+++|| +| ||+.++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~g--~r~~~~~~~~~ 76 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK---FG--PRYTTTLSLLL 76 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH---hC--chHHHHHHHHH
Confidence 345566666666555 45566666668888999999999999999999988 8899999999 45 77778888888
Q ss_pred HHHHHHHHHhhhc-hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 212 GALSWSLMATIVE-SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 212 ~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
..++.++++ +.+ +++.+++.|++.|++.+.. .....++.|++|+++|+++.++...... +|..+++.+++.+..
T Consensus 77 ~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 77 LAIPCLWAG-LAVQSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGN---MGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHH-HHhhhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhH---HHHHHHHHHHHHHHH
Confidence 888877777 566 8888899999999986654 5678899999999999999888875555 777777776666554
Q ss_pred ----------ccchHHHHH-HHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhh
Q 013568 291 ----------AYGVRFVFG-VTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFL 358 (440)
Q Consensus 291 ----------~~gw~~~f~-i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 358 (440)
+.+||+.|+ ..+++..+..+ ...+.+|++..++++++....... .+..++..++.++.+++|+++.
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGAR--WSVGTGALGDQLKVFRDRHTWI 229 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhccccccc--ccccchhHHHHHHHHhccchhh
Confidence 348999994 43444443333 344555544322111111000000 0011122234566788888776
Q ss_pred hHHHHHhhhccc-cccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHH
Q 013568 359 PTLFVFLWQATP-HSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIF 428 (440)
Q Consensus 359 ~~l~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~ 428 (440)
..+..+++.... ........+..+.+|+++.+.+.+.....++.+++.++.+++.||+|+|+.+..+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~ 300 (366)
T TIGR00886 230 LALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLG 300 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHH
Confidence 655444432211 1122223344467899999999888888999999999999999999998766655433
No 20
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.90 E-value=3.3e-23 Score=200.19 Aligned_cols=280 Identities=19% Similarity=0.299 Sum_probs=197.6
Q ss_pred HHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHH
Q 013568 139 AMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSW 216 (440)
Q Consensus 139 ~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~ 216 (440)
++.++...+. +.....++.++.+++|.+..+++++.+++.++..+ ++++|+++|| +| ||+.+..+.++.+++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~g--~r~~l~~~~~~~~~~~ 76 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR---FG--RRRVLIIGLLLFALGS 76 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH---S---HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cC--CeeeEeehhhhhhhHH
Confidence 3445555555 45566666577777999999999999999998887 8999999999 45 6668888888888884
Q ss_pred HHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHH
Q 013568 217 SLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRF 296 (440)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~ 296 (440)
.+.. ++++.+.++++|++.|++.+...+...+++.|++|+++|+++.++...... +|.+++|.+++++.+.+|||+
T Consensus 77 ~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~l~~~l~~~~~~~~ 152 (352)
T PF07690_consen 77 LLLA-FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFS---LGSILGPLLGGFLISYFGWRW 152 (352)
T ss_dssp HHHH-HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHH---HHHHHHHHHHHHCCCHCHHCC
T ss_pred HHhh-hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhh---hhhhcccchhhhhhhcccccc
Confidence 4444 446667899999999999999999999999999999999999999988887 999999999999998899999
Q ss_pred HHHHHHHHHHHHHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHH-HHHHhcCcchhhhHHHHHhhhccc-ccc
Q 013568 297 VFGVTALLPLITSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQ-LWEAVKQPNVFLPTLFVFLWQATP-HSD 373 (440)
Q Consensus 297 ~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~~~-~~~ 373 (440)
.|++.+++.++..++ .+++++++..++.+++.+.. +..+..+++ .+...++|.+|...+..++..... ...
T Consensus 153 ~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
T PF07690_consen 153 AFLISAILSLIAAILFILFLPEPPPPRERESPKESE------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFS 226 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhhHhhhhhhcccccccccccccc------cccccccccccccccccchhhhhhhhhhHHHHHHHHhh
Confidence 999999988887663 34555544433222221100 001111122 334455665652222222222111 112
Q ss_pred ceeeeeeeccCCCC-hhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHh
Q 013568 374 SAMFYFTTNELGFT-PEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 374 ~~~~~~~~~~~g~s-~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~ 433 (440)
...+.+..+.+|++ ..+.+.+....+++.+++.++.+++.||+++++..........+..
T Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 287 (352)
T PF07690_consen 227 FFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGA 287 (352)
T ss_dssp HHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 22233345678888 7888999999999999999999999999998777666555554444
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.90 E-value=2.7e-22 Score=197.27 Aligned_cols=241 Identities=14% Similarity=0.060 Sum_probs=181.6
Q ss_pred HHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHH
Q 013568 152 RLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAA 230 (440)
Q Consensus 152 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (440)
...+|++. +++|+++++.++..+...++..+ +|++|+++|| +| ||+.+..+.++..++.++.. ..++++.++
T Consensus 40 ~~~l~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr---~g--rr~~~~~~~~~~~~~~~~~~-~~~~~~~l~ 112 (394)
T PRK10213 40 VSLLTPMA-QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA---TD--RRYVVILFAVLLTLSCLLVS-FANSFSLLL 112 (394)
T ss_pred HhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cC--cHHHHHHHHHHHHHHHHHHH-HHChHHHHH
Confidence 33455554 45899999999999999988887 8899999999 45 78888888888888877777 678899999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 013568 231 LSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSG 310 (440)
Q Consensus 231 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~ 310 (440)
++|++.|++.+...+...+++.|++|+++|+++.++...... +|.++||.+++++.+.+|||+.|++.+++.++..+
T Consensus 113 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~---~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 113 IGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVS---IALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888887777 99999999999999999999999998876665544
Q ss_pred hh-eeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccccc-cceeeeeeeccCCCCh
Q 013568 311 VA-VLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHS-DSAMFYFTTNELGFTP 388 (440)
Q Consensus 311 ~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~s~ 388 (440)
.. ...||++.++ ++ . . +..++.+++|.++...+..++....... ......++.+++|+++
T Consensus 190 ~~~~~~p~~~~~~--~~------------~-~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~ 251 (394)
T PRK10213 190 WIIKSLPSLPGEP--SH------------Q-K---QNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGV 251 (394)
T ss_pred HHHHHCCCCCccc--cc------------c-h---hHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 32 2355543110 00 0 1 1234567888877655443332221101 1111122235679999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 013568 389 EFLGRVKFVTSVASLLGVGLYNGFLKNVPLRK 420 (440)
Q Consensus 389 ~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~ 420 (440)
...+......+++.+++.++.+++.||.+++.
T Consensus 252 ~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~ 283 (394)
T PRK10213 252 DGLTLVLLSFGIASFVGTSLSSFILKRSVKLA 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 99999999999999999999999999965443
No 22
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.90 E-value=3.4e-22 Score=196.61 Aligned_cols=259 Identities=12% Similarity=0.025 Sum_probs=192.5
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
......+|.+.++ +|.+..+.++..+++.+++.+ +|+.|+++|| +| ||++++.+.++..++...+. ..++.+
T Consensus 20 ~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr---~g--~r~~l~~~~~~~~i~~~~~~-~~~~~~ 92 (392)
T PRK10473 20 DMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADR---SG--RKPVAIPGAALFIIASLLCS-LAETSS 92 (392)
T ss_pred HHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH---hC--ChHHHHHHHHHHHHHHHHHH-HhCcHH
Confidence 4555566666555 899999999999999999888 8899999999 45 77888888888777777766 667888
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.+++.|++.|++.+...+...+++.|.+++++|++..++.+.... +|.+++|.+++.+.+..||++.|++.+++.++
T Consensus 93 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~---i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i 169 (392)
T PRK10473 93 LFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITC---IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGIL 169 (392)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHH
Confidence 888999999999999888999999999999999998888876666 89999999999988889999999998877766
Q ss_pred HHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHh-hhccccccceeeeeeeccCC
Q 013568 308 TSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFL-WQATPHSDSAMFYFTTNELG 385 (440)
Q Consensus 308 ~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~g 385 (440)
..+. .+++||++..+++++ ....++.++.++++.++...+...+ +...........++..+++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 235 (392)
T PRK10473 170 VLLLSLFILKETRPARAPAA--------------SSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMG 235 (392)
T ss_pred HHHHHHHHcCCCCCcccCCc--------------cchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcC
Confidence 6553 445666543211100 0112334456777775554332222 11110011112233335789
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 386 FTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 386 ~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
+++.+.+.+....+++.+++.++.+++.||+|+|+.+..+.++..+
T Consensus 236 ~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~ 281 (392)
T PRK10473 236 FSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLA 281 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988776655443
No 23
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.90 E-value=7.5e-23 Score=205.88 Aligned_cols=280 Identities=15% Similarity=0.082 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHH
Q 013568 137 AVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGAL 214 (440)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~ 214 (440)
.+++.|+...+. ......+|.+. +++|++..+.|++.+.+.+++.+ +++.|+++|| +| ||+++..+.++..+
T Consensus 33 ~~~~~~~~~y~~r~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr---~g--~r~~l~~~~~~~~~ 106 (467)
T PRK09556 33 VVFIGYLTMYLIRKNFKAAQNDMI-STYGLSTTELGMIGLGFSITYGVGKTLVGYYADG---KN--TKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHhcChhhhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhc---cC--ccchHHHHHHHHHH
Confidence 444555555555 45555666554 55999999999999999999988 8999999999 45 77777666666555
Q ss_pred HHHHHHh----hhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 215 SWSLMAT----IVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 215 ~~~~~~~----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
..+.++. .+++.+.++++|++.|++.+...+....++.|++|+++|+++++++..+.. +|.++++.+..++..
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~---lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHN---LGGAGAGGVALWGAN 183 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccc---hhhhHHHHHHHHHHH
Confidence 5444442 257888999999999999999888999999999999999999999987777 999999988877766
Q ss_pred cc---chHHHHHHHHHHHHHHHHh-heeeccccccCCCcCCCCCCC-----CCccchhhHHHHHH-H-HHHhcCcchhhh
Q 013568 291 AY---GVRFVFGVTALLPLITSGV-AVLVKEQQVLGPSRRQNLPLG-----DPSFFESSKQNMFQ-L-WEAVKQPNVFLP 359 (440)
Q Consensus 291 ~~---gw~~~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~-~~~l~~~~~~~~ 359 (440)
.+ +|+..|.+.+++.++..++ +++.++++.+....+.++..+ .+...+..+....+ . ...+++|.+|..
T Consensus 184 ~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 263 (467)
T PRK09556 184 YFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLL 263 (467)
T ss_pred hhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHH
Confidence 43 6999998888777665553 334455433211000000000 00000000001111 1 236789998887
Q ss_pred HHHHHhhhccccccce-eeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHH
Q 013568 360 TLFVFLWQATPHSDSA-MFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLAN 425 (440)
Q Consensus 360 ~l~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~ 425 (440)
.+..++.......... .+.|..+.+|++..+.++......++.++|.+++|++.||+++|+.+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~ 330 (467)
T PRK09556 264 CFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVAC 330 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHH
Confidence 7665554332211222 23344567899999999999889999999999999999999988776554
No 24
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.90 E-value=5.8e-22 Score=196.08 Aligned_cols=251 Identities=14% Similarity=0.075 Sum_probs=189.8
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
......+|.. .+++|.+..+.++..+++.+++.+ ++++|+++|| +| ||++++.+.++..++.+++. .+++.+
T Consensus 33 ~~~~p~l~~i-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr---~G--rr~~l~~~~~~~~~~~~~~~-~a~~~~ 105 (413)
T PRK15403 33 DLIQPGIINV-VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR---IG--RRPVLITGALIFTLACAATL-FTTSMT 105 (413)
T ss_pred HhhccCHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH---cC--chHHHHHHHHHHHHHHHHHH-HcCCHH
Confidence 4666666664 455899999999999999999988 8899999999 45 77788888888888877777 778999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.++++|+++|++.+...+...+++.|.+++++++++.++...... +|..+||.+++.+.++.|||+.|++.+++.++
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i 182 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVL---VAPIIGPLSGAALMHFVHWKVLFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 999999999999987777778889999999999988888887777 99999999999999888999999999888777
Q ss_pred HHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc-cccceeeeeeeccCC
Q 013568 308 TSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP-HSDSAMFYFTTNELG 385 (440)
Q Consensus 308 ~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~g 385 (440)
..+. .+++||++..++. + ...+...++.+++++||.+|...+..++..... ......+++..+.+|
T Consensus 183 ~~~~~~~~lp~~~~~~~~--~----------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g 250 (413)
T PRK15403 183 AFVGLLLAMPETVKRGAV--P----------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGG 250 (413)
T ss_pred HHHHHHHhCCCCccccCC--C----------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcC
Confidence 6653 4457776432111 0 012234556778889999887665444433211 111222344446679
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhH
Q 013568 386 FTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKI 421 (440)
Q Consensus 386 ~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~ 421 (440)
+++.+.++......++.+++..+.+++.++..+++.
T Consensus 251 ~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 286 (413)
T PRK15403 251 MTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRF 286 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH
Confidence 999999999888888888888888887755444443
No 25
>PRK10133 L-fucose transporter; Provisional
Probab=99.90 E-value=5.5e-22 Score=197.47 Aligned_cols=279 Identities=13% Similarity=0.096 Sum_probs=193.9
Q ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 134 DNFAVAMVYFVQGVLGLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
.++.+.+.++..++.......+.+.+++++|++..+.|++.+.+.+++.+ +++.|+++|| +| ||+.+..+.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr---~G--~r~~l~~g~~~~ 101 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK---LS--YKAGIITGLFLY 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--cHHHHHHHHHHH
Confidence 34556667777777644444444456778999999999999999999998 8899999999 45 888888888888
Q ss_pred HHHHHHHH--hhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 213 ALSWSLMA--TIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 213 ~~~~~~~~--~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
+++.+++. ..++++..++++|++.|++.+...+..+.++.|+.+++++...+++.+..+. +|..+|+.+++.+..
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~---~G~~~g~~~g~~l~~ 178 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNS---FGAIIAVVFGQSLIL 178 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHH---HHHHHHHHHHHHHHh
Confidence 88876542 2567889999999999999999999999999998777776666777777777 899999988876430
Q ss_pred -c-------------------------cchHHHHHHHHHHHH-HHHHh-heeeccccccCCCcCCCCCCCCCccchhhHH
Q 013568 291 -A-------------------------YGVRFVFGVTALLPL-ITSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQ 342 (440)
Q Consensus 291 -~-------------------------~gw~~~f~i~~~~~~-~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (440)
. .+||++|+....+.. +..+. ....||.+.+++. ++ ....
T Consensus 179 ~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~--~~----------~~~~ 246 (438)
T PRK10133 179 SNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS--DA----------KQGS 246 (438)
T ss_pred cCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--cc----------cccc
Confidence 0 256667764443332 22222 2234442211110 00 0011
Q ss_pred HHHHHHHHhcCcchhhhHHHHHhhhcccccccee-e-eeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 013568 343 NMFQLWEAVKQPNVFLPTLFVFLWQATPHSDSAM-F-YFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRK 420 (440)
Q Consensus 343 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~ 420 (440)
..++.++++++|.++...+..+++.........+ . |...+.+|+++.++++......++.++|.++++++.||+++|+
T Consensus 247 ~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~ 326 (438)
T PRK10133 247 FSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK 326 (438)
T ss_pred hhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 2233456778888766555444444322111111 1 2223568999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013568 421 IFLANTIFGTAL 432 (440)
Q Consensus 421 ~l~~~~~~~~~~ 432 (440)
.+..+.++.++.
T Consensus 327 ~l~~~~~~~~~~ 338 (438)
T PRK10133 327 VLAAYALIAMAL 338 (438)
T ss_pred HHHHHHHHHHHH
Confidence 887776555433
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=5.1e-22 Score=196.30 Aligned_cols=259 Identities=12% Similarity=-0.007 Sum_probs=192.7
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
+.+...++.+.+ ++|++..+.++..+.+.+++.+ +++.|+++|| +| ||+++..+.++..++.+.+. ..++.+
T Consensus 30 ~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr---~g--~r~~l~~~~~~~~~~~~~~~-~~~~~~ 102 (406)
T PRK15402 30 DMIQPGMLAVVE-DFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDR---IG--RRPVMLAGVAFFILTCLAIL-LAQSIE 102 (406)
T ss_pred hhHhcchHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--ChHHHHHHHHHHHHHHHHHH-HHccHH
Confidence 455666666555 4899999999999999999888 7899999999 45 77788888777777777766 677888
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.+++.|++.|++.+...+...+.+.|.+++++|.+..++...... +|..+||.+++++.+..+||+.|++.+++.++
T Consensus 103 ~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~ 179 (406)
T PRK15402 103 QFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVAL---LAPLLGPLVGAALIHVLPWRGMFVLFAALAAL 179 (406)
T ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHccCccHHHHHHHHHHHH
Confidence 899999999999998888889999999999988877776665555 88999999999999889999999998887776
Q ss_pred HHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc-ccceeeeeeeccCC
Q 013568 308 TSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH-SDSAMFYFTTNELG 385 (440)
Q Consensus 308 ~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g 385 (440)
..+. .++.||++...+++ ...++..++.+..+++|.++...+..++...... .....++++.+.+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g 247 (406)
T PRK15402 180 SFFGLWRAMPETAGRVGEK------------LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQ 247 (406)
T ss_pred HHHHHHHhCCCCCcccccc------------ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC
Confidence 6553 34566654321110 0112233455677889987776554443322111 11112333345689
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHH
Q 013568 386 FTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFG 429 (440)
Q Consensus 386 ~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~ 429 (440)
+++.+.+.......++.++|.++.+++.||+++|+.+..+.++.
T Consensus 248 ~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~ 291 (406)
T PRK15402 248 LSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPM 291 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99999998888888889999999999999999998877765433
No 27
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=1.2e-22 Score=205.56 Aligned_cols=289 Identities=13% Similarity=0.112 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
+..+++..+...+. ......+|.+.++ +|.+..+.+++.+.+.++..+ .+++|+++|| +| ||+.++.+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~g--~r~~~~~~~~~~ 77 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKR---FG--TRRLFLISTFAF 77 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH---hC--cHHHHHHHHHHH
Confidence 34556666777776 4566566665555 899999999999999999888 7899999999 45 788888888888
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc
Q 013568 213 ALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY 292 (440)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~ 292 (440)
.++.++++ ..++...+++.|++.|++.+...+...+++.|++|+++|+++.+++..... +|..+||.+++++.+++
T Consensus 78 ~~~~~~~~-~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~---~g~~~g~~~~~~l~~~~ 153 (485)
T TIGR00711 78 TLGSLLCG-VAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVL---VAPALGPTLGGWIIENY 153 (485)
T ss_pred HHHHHHHh-CcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH---HHhhhhhccHhHhccCc
Confidence 88877777 778899999999999999999999999999999999999999999888877 99999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHh-heeeccccccCCCcCCC-----------------CCCCCCccchhhH-------------
Q 013568 293 GVRFVFGVTALLPLITSGV-AVLVKEQQVLGPSRRQN-----------------LPLGDPSFFESSK------------- 341 (440)
Q Consensus 293 gw~~~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~-----------------~~~~~~~~~~~~~------------- 341 (440)
|||+.|++.+++.++..+. .+++||+++.+..+.+. .+..+.+......
T Consensus 154 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (485)
T TIGR00711 154 HWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAII 233 (485)
T ss_pred CceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHH
Confidence 9999999988777665553 34556543221111000 0000000000000
Q ss_pred ----HHHH-----HHHHHhcCcchhhhHHHHHhhhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 013568 342 ----QNMF-----QLWEAVKQPNVFLPTLFVFLWQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNG 411 (440)
Q Consensus 342 ----~~~~-----~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~ 411 (440)
...+ ...+.+++|.++...+..++...... .....+.+..+.+|+++.+.|+...+..++.+++.++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~ 313 (485)
T TIGR00711 234 AFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGR 313 (485)
T ss_pred HHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 01245677776665544444333111 1222233444678999999999999999999999999999
Q ss_pred hhccCCchhHHHHHHHHHHHHh
Q 013568 412 FLKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 412 l~~r~g~r~~l~~~~~~~~~~~ 433 (440)
+.||+++|+.+..+.++.++..
T Consensus 314 l~~r~~~~~~~~~g~~~~~~~~ 335 (485)
T TIGR00711 314 MGDKIDPRKLVTIGLILYAVGF 335 (485)
T ss_pred HHhhcCcHHHHHHHHHHHHHHH
Confidence 9999999998877765555443
No 28
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.90 E-value=3.7e-22 Score=197.28 Aligned_cols=273 Identities=17% Similarity=0.099 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHH
Q 013568 137 AVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGAL 214 (440)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~ 214 (440)
..++..+..++. .......|.+. +++|.+..+.+++.+...++..+ +++.|+++|| +| ||+.+..+.++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr---~g--~r~~~~~~~~~~~~ 92 (406)
T PRK11551 19 LCFLVALLEGLDLQSAGVAAPRMA-QEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR---IG--RKRILIVSVALFGL 92 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--CchhHHHHHHHHHH
Confidence 344455555665 44555555555 45899999999999999999888 7889999999 45 77777777777777
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccch
Q 013568 215 SWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGV 294 (440)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw 294 (440)
+.+.+. +.++++.+++.|++.|++.+...+...+++.|++++++|+++.++...+.. +|..+++.+++.+.+..+|
T Consensus 93 ~~~~~~-~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 93 FSLATA-QAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVP---FGGALASVIGVLAAGDAAW 168 (406)
T ss_pred HHHHHH-HhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHccccCH
Confidence 766666 678888999999999999999999999999999999999999998887777 9999999999888888999
Q ss_pred HHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc-c
Q 013568 295 RFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH-S 372 (440)
Q Consensus 295 ~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~ 372 (440)
++.|++.+++.++..+ ...++||+++..+.+.+.+ ..+...+..++..+.+..+...+..++...... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK---------QRAPVLRALFGEGRATATLLLWISYFFTLIVLYFL 239 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch---------hhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999998776655544 4456777654322111000 001111111111111222222111111111000 1
Q ss_pred cceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHH
Q 013568 373 DSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFG 429 (440)
Q Consensus 373 ~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~ 429 (440)
....+.+. ++.|+++.+.+......+++.+++.++.+++.||+++|+.+..+.+..
T Consensus 240 ~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 295 (406)
T PRK11551 240 LNWLPSLL-VGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGI 295 (406)
T ss_pred HHHHHHHH-HhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 11111222 457999999999999999999999999999999999998887654443
No 29
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=5.9e-22 Score=193.47 Aligned_cols=267 Identities=16% Similarity=0.174 Sum_probs=184.8
Q ss_pred HHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHH
Q 013568 140 MVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWS 217 (440)
Q Consensus 140 ~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~ 217 (440)
+.++..++. +.....++.++++++|.|..+.|++.+++.+...+ +|++|.++|| +| +||.++..+.++..++.+
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr---~g-~r~~~~~~~~~~~~~~~~ 79 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDY---QG-DRKGLILFCCLLAALACL 79 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cC-CchHHHHHHHHHHHHHHH
Confidence 446666666 67778888888888999999999999988887666 8999999999 46 555555555555555555
Q ss_pred HHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccc--hhhhHHhhhhhhhHHHHHHHHHHHhhhccchH
Q 013568 218 LMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVS--GSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVR 295 (440)
Q Consensus 218 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~ 295 (440)
+++ .+++++.+++.+++.|.+.+...+...++..|..++++|+.. .+....... +|.++||.+++++.+.+|||
T Consensus 80 ~~~-~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~ig~~~~~~l~~~~~~~ 155 (375)
T TIGR00899 80 LFA-WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQIS---LAWVIGPPLAFWLALGFGFT 155 (375)
T ss_pred HHH-hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHh---HHHHHhhhHHHHHHHhcccH
Confidence 555 667888888888888887777778888888898877766533 344443444 99999999999999989999
Q ss_pred HHHHHHHHHHHHHHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHh-hhcccccc
Q 013568 296 FVFGVTALLPLITSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFL-WQATPHSD 373 (440)
Q Consensus 296 ~~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~-~~~~~~~~ 373 (440)
+.|++.+++.++..+. .+++||.+..++++++ + .+.++.+++|.++...+..++ +.......
T Consensus 156 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (375)
T TIGR00899 156 VMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT-------------R---LEVRGLLASRDTRLLFVACTLMWGCNILYI 219 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCcccccC-------------c---chhhhhhcCcchHHHHHHHHHHHHHHHHHH
Confidence 9999998877666554 4457775432211100 0 011234556655543332222 11110011
Q ss_pred ceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q 013568 374 SAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGT 430 (440)
Q Consensus 374 ~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~ 430 (440)
...+.+..+++|.++.+.+.+.....+..+++.++.+++.||+++|+.+..+.++..
T Consensus 220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~ 276 (375)
T TIGR00899 220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGV 276 (375)
T ss_pred hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHH
Confidence 222333446789999999988877777778888999999999999998877655443
No 30
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=1.1e-21 Score=192.91 Aligned_cols=272 Identities=15% Similarity=0.154 Sum_probs=194.5
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+++..++..+. ......++...++ +|.+..+.+++.+.+.+++.+ +|++|+++|| +| ||++++.+.++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr---~g--rr~vl~~~~~~ 77 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS---FP--KGRVMFIANGI 77 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc---cC--CchhhHHHHHH
Confidence 566677777777775 4555566666655 899999999999999999988 8999999999 45 88888888887
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc
Q 013568 212 GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA 291 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~ 291 (440)
..++.++++ +..+. ++.|+++|++.+...++..+++.|++|+++|++++++.+.... +|.++||.++|++.+.
T Consensus 78 ~~~~~~~~~-~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~---~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 78 KLLGCLLML-FGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTI---AAILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHH-HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 777665555 33332 6789999999999999999999999999999999999887777 9999999999999875
Q ss_pred cchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhh-hccc
Q 013568 292 YGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLW-QATP 370 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~-~~~~ 370 (440)
.|+..+.+.+.+.++..+..+.+||++.+++..+.+ . . ...++..+..+.++++|.+........++ ....
T Consensus 151 -~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~---~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 222 (393)
T PRK11195 151 -HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSWN-P---I---ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGA 222 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCC-H---H---HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHH
Confidence 488888777766555555556777754322111100 0 0 01112223344566777655443322221 1111
Q ss_pred cccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHH
Q 013568 371 HSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANT 426 (440)
Q Consensus 371 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~ 426 (440)
........+..+.+|.++.+.|++....+++.++|.++.+++.||.++++.+..+.
T Consensus 223 ~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~ 278 (393)
T PRK11195 223 TLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI 278 (393)
T ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH
Confidence 11111223344678999999999999999999999999999999988887666654
No 31
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.89 E-value=9e-22 Score=196.09 Aligned_cols=268 Identities=15% Similarity=0.088 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhcC---CChhhhHHHHHhhhhhHH---H-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 137 AVAMVYFVQGVLGLARLAVNFYLKDDLH---LDPAETAVISGFSSLPWL---I-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g---~s~~~~g~~~s~~~l~~~---~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
..+++++...++........+++.++++ .+..+.+...+++.+.+. + ++++|+++|| +| ||+.+..+.
T Consensus 26 ~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr---~G--rr~~l~~~~ 100 (432)
T PRK10406 26 GASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADK---HG--RKKSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--cHHHHHHHH
Confidence 3445566667764334455556666664 555555554444555544 5 6788999999 45 888888988
Q ss_pred HHHHHHHHHHHhhhchh--------HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHH
Q 013568 210 LLGALSWSLMATIVESK--------YSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVS 281 (440)
Q Consensus 210 ~~~~~~~~~~~~~~~~~--------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig 281 (440)
++..++.++++ +.+++ ..++++|+++|++.+...+...+++.|++|+++|++..++...+.. .|.+++
T Consensus 101 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~---~G~~~~ 176 (432)
T PRK10406 101 CMMCFGSLVIA-CLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLI---GGQLLA 176 (432)
T ss_pred HHHHHHHHHHh-hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHH---HHHHHH
Confidence 88888888777 55544 3578999999999999999999999999999999988777766655 677777
Q ss_pred HHHHHHhh--------hccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcC
Q 013568 282 SYFSGSMV--------DAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQ 353 (440)
Q Consensus 282 ~~i~g~l~--------~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 353 (440)
+.+...+. ..+|||++|++.+++.++.+.+...+||++..++++. . .....++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~~------------~---~~~~~~~l~~~ 241 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRAL------------K---EAGSLKGLWRN 241 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhhh------------c---ccccHHHHHhh
Confidence 66654443 2579999999988777665545445666543211000 0 01123445667
Q ss_pred cchhhhHHHHHhh-hccc-cccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHH
Q 013568 354 PNVFLPTLFVFLW-QATP-HSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIF 428 (440)
Q Consensus 354 ~~~~~~~l~~~~~-~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~ 428 (440)
++.+...+..++. .... ......+.+..+.+|++..+.+.......++..++..+.|++.||+++|+.+....++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~ 318 (432)
T PRK10406 242 RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSL 318 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 7665544322221 1111 0111122333356899988888888877777788888999999999999887765543
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.89 E-value=1e-22 Score=199.46 Aligned_cols=260 Identities=17% Similarity=0.135 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHH
Q 013568 151 ARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSA 229 (440)
Q Consensus 151 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 229 (440)
.....| ++++++|++..+.+++.+++.++..+ ++++|+++|| +| ||+.+..+.++..++.++++ +.++.+.+
T Consensus 13 ~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~g--~r~~~~~~~~~~~~~~~~~~-~~~~~~~~ 85 (399)
T TIGR00893 13 LSFAAP-MLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDR---FG--ARKTLAVFIVIWGVFTGLQA-FAGAYVSL 85 (399)
T ss_pred hhHhHH-HHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHh---cC--cceeeHHHHHHHHHHHHHHH-HHcCHHHH
Confidence 333344 46666999999999999999999888 8899999999 45 67777778777777777776 67788999
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHH
Q 013568 230 ALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITS 309 (440)
Q Consensus 230 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~ 309 (440)
+++|++.|++.+...+....++.|++|+++|++..++...... +|.++++.+++++.+..+||+.|++.+++.++..
T Consensus 86 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 86 YILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQG---LGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998888777 9999999999999999999999999888777665
Q ss_pred Hh-heeeccccccCCCcCCC---CCCC----CCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccccccc-eeeeee
Q 013568 310 GV-AVLVKEQQVLGPSRRQN---LPLG----DPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHSDS-AMFYFT 380 (440)
Q Consensus 310 ~~-~~~~~e~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~ 380 (440)
+. .++.+|++..+....++ ...+ +....+..+......++.+++|+++...+..+++........ ....+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYL 242 (399)
T ss_pred HHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 54 44556554321110000 0000 000000111122335567788887776655555444221111 123334
Q ss_pred eccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 013568 381 TNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRK 420 (440)
Q Consensus 381 ~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~ 420 (440)
.+.+|.++.+.+.+.....++.+++.++.+++.||+++|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 243 VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4668999999999999999999999999999999999885
No 33
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.89 E-value=6e-22 Score=200.45 Aligned_cols=281 Identities=12% Similarity=0.075 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhh-hHH-----HHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhh
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAE-TAV-----ISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLV 206 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~-~g~-----~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~ 206 (440)
++...++++..+++ ..+.... +++.++++.+... .++ +.++..+++.+ ++++|+++|| +| ||+.+.
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr---~G--rr~~l~ 91 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVA-YALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDK---YG--RQKILA 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cc--cHHHHH
Confidence 44556677777777 4444444 4556657543322 122 13556677777 7788999999 45 888899
Q ss_pred HHHHHHHHHHHHHHhhhchhHH--------HHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHH
Q 013568 207 LSGLLGALSWSLMATIVESKYS--------AALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGG 278 (440)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~ 278 (440)
++.+++.++.++++ +++++.. ++++|+++|++.+...+...+++.|++|+++|++..++...+.. +|.
T Consensus 92 ~~~~l~~i~~~~~a-~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~---~G~ 167 (490)
T PRK10642 92 ITIVIMSISTFCIG-LIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSI---AGF 167 (490)
T ss_pred HHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHH---HHH
Confidence 99999999988888 6777653 78999999999999999999999999999999998888776665 677
Q ss_pred HHHHHHHHHhh--------hccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHH
Q 013568 279 IVSSYFSGSMV--------DAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEA 350 (440)
Q Consensus 279 ~ig~~i~g~l~--------~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (440)
.+|+.+...+. ..+|||++|++.+++.++.+++..++||++...+..++.++..++...+..+.. +.+.
T Consensus 168 ~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 244 (490)
T PRK10642 168 VLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVS---FKEI 244 (490)
T ss_pred HHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccCC---HHHH
Confidence 66665554432 257999999998766665555556788875421111000000000000000111 1222
Q ss_pred hc-CcchhhhH-HHHHhhhccc-cccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHH
Q 013568 351 VK-QPNVFLPT-LFVFLWQATP-HSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTI 427 (440)
Q Consensus 351 l~-~~~~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~ 427 (440)
++ +++.+... ...++..... ......+.++.+.+|++....++......++.+++.++.+++.||+|||+.+..+.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 324 (490)
T PRK10642 245 ATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSV 324 (490)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 22 22222211 1111111110 011222333345678888877777778888999999999999999999998877654
Q ss_pred H
Q 013568 428 F 428 (440)
Q Consensus 428 ~ 428 (440)
+
T Consensus 325 ~ 325 (490)
T PRK10642 325 A 325 (490)
T ss_pred H
Confidence 3
No 34
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.89 E-value=4.6e-22 Score=193.96 Aligned_cols=265 Identities=15% Similarity=0.110 Sum_probs=189.5
Q ss_pred HHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHH
Q 013568 142 YFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLM 219 (440)
Q Consensus 142 ~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~ 219 (440)
|+...+. ......+| ++.+++|++..+.+++.++..+++.+ ++++|+++|| +| ||+.++.+.++..++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr---~g--~r~~~~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 4 YAAYYLVRKNFALAMP-YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDR---SN--PRVFLPIGLILCAIVNLFF 77 (379)
T ss_pred hhHHHHhHHhhhhhhH-HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHh---hC--CeehhHHHHHHHHHHHHHH
Confidence 4444444 34444445 45566899999999999999999888 8899999999 45 7778888888888887777
Q ss_pred HhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHH-HHHHHhhhccchHHHH
Q 013568 220 ATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSS-YFSGSMVDAYGVRFVF 298 (440)
Q Consensus 220 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~-~i~g~l~~~~gw~~~f 298 (440)
+ +.++.+.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+.. +|.++++ .+++.+.+..+|++.|
T Consensus 78 ~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~ 153 (379)
T TIGR00881 78 G-FSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHN---VGGGLLPPLVLFGIAELYSWHWVF 153 (379)
T ss_pred H-HhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccch---hHHHHHHHHHHHHHHhcCCchhHH
Confidence 7 677888999999999999999999999999999999999999999888777 9999999 5777777788999999
Q ss_pred HHHHHHHHHHHH-hheeeccccccCCCcCCC----CCCCC--CccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc
Q 013568 299 GVTALLPLITSG-VAVLVKEQQVLGPSRRQN----LPLGD--PSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH 371 (440)
Q Consensus 299 ~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 371 (440)
++.+++.++..+ ..++.+|++..+...+.+ ++.+. +...+..+......++.+++|.+|...+..++......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (379)
T TIGR00881 154 IVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRT 233 (379)
T ss_pred HHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 998877766544 455666654322111100 00000 00000011111234556788888776655444333111
Q ss_pred -ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 013568 372 -SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNV 416 (440)
Q Consensus 372 -~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~ 416 (440)
.......+..+.+|+++.+.+.......++.+++.++.+++.||.
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~ 279 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKL 279 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHH
Confidence 122223334467899999999999999999999999999999975
No 35
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.89 E-value=7.9e-22 Score=194.01 Aligned_cols=253 Identities=13% Similarity=0.094 Sum_probs=184.4
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHH
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYS 228 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 228 (440)
.....+|. +++++|+|..+.+++.+++.+++.+ +++.|+++|| +| ||+++..+..+..++.+.++ ++++++.
T Consensus 27 ~~~~~lp~-i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr---~G--~r~~l~~~~~l~~~~~~~~~-~a~~~~~ 99 (393)
T PRK09705 27 SVGPLLPQ-LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQH---VS--ERRSVAISLLLIAVGALMRE-LYPQSAL 99 (393)
T ss_pred ccchhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH---hC--chHHHHHHHHHHHHHHHHHH-HCcchHH
Confidence 34445555 4455999999999999999999988 8899999999 45 88899999999999988888 7889999
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHH
Q 013568 229 AALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY-GVRFVFGVTALLPLI 307 (440)
Q Consensus 229 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~-gw~~~f~i~~~~~~~ 307 (440)
+++.|++.|++.+...+....++.+++| ++|+++++++..+.. +|..+|+.+++++.++. +||+.+.+.++..++
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~---~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALM---GGGGLGAAITPWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHH---HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999999999999988888999999987 778988888887766 89999999999888875 899998776655544
Q ss_pred HHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc-ccceeeeeeeccCCC
Q 013568 308 TSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH-SDSAMFYFTTNELGF 386 (440)
Q Consensus 308 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~ 386 (440)
..+..++..++++.++++++ . ...+.+++++.|...+..++...... .....+.+. +++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~-------------~----~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l-~~~g~ 237 (393)
T PRK09705 176 ALFAWWWQSAREVASSHKTT-------------T----TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFY-IEIGA 237 (393)
T ss_pred HHHHHHHHhcCCCccccCCC-------------c----CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCC
Confidence 43333322221111110000 0 01233456666655443333322111 111122223 34799
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 387 TPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 387 s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
+..++|......+++.++|.++.+++.||+++|+.++.+..+.++
T Consensus 238 s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 238 SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLV 282 (393)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888776555443
No 36
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.89 E-value=1.6e-21 Score=189.41 Aligned_cols=240 Identities=13% Similarity=0.020 Sum_probs=164.2
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHH
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYS 228 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 228 (440)
.+...+|.+. +++|+|.++.|++.+.+.+++.+ +++.|+++|| +| ||+++..+......+..... ..+++..
T Consensus 9 ~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr---~g--rr~~~~~~~~~~~~~~~~~~-~~~~~~~ 81 (368)
T TIGR00903 9 TFSPVLSLVA-EDIDVSKEELGLLAITYPAAFLALTIPSGLLLDR---AF--KRWFLFGSLATFAAAAGRLL-DPFNYEW 81 (368)
T ss_pred HHHhhHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cc--chHHHHHHHHHHHHHHHHHH-HhccHHH
Confidence 3444455544 45999999999999999999988 8889999999 45 66665555444434332222 3368889
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHH
Q 013568 229 AALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLIT 308 (440)
Q Consensus 229 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~ 308 (440)
++++|++.|++.+.. ......++|++|+++|+++.++...+.. +|.++++.+++++.+++|||+.|++.+++.++.
T Consensus 82 l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~---lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~ 157 (368)
T TIGR00903 82 LLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMY---LGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAG 157 (368)
T ss_pred HHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 999999999999864 4566667999999999999999988888 999999999999999999999999988877665
Q ss_pred HH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccccccee-eeeeeccCCC
Q 013568 309 SG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHSDSAM-FYFTTNELGF 386 (440)
Q Consensus 309 ~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~g~ 386 (440)
.+ ..+++||+++.+.+. . ..++..++.++++++|.+|...+..++..........+ +.++ ++.|+
T Consensus 158 ~~~~~~~lp~~p~~~~~~--~----------~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L-~~~g~ 224 (368)
T TIGR00903 158 IILVLAALPALPFQAAEG--F----------GFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAAL-RPAGL 224 (368)
T ss_pred HHHHHHHcCCCCCCCCCC--c----------chHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCC
Confidence 55 455788865432110 0 00112245667889999888876655544422222222 2333 34677
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013568 387 TPEFLGRVKFVTSVASLLGVGLYNGFLKNVP 417 (440)
Q Consensus 387 s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g 417 (440)
+.. .+.......++..++ .+++.||..
T Consensus 225 s~~-~~~~~~l~~~~g~~g---~~~~~d~~~ 251 (368)
T TIGR00903 225 EDI-AGDAVALAILAGLIG---VAVIPDRVA 251 (368)
T ss_pred ChH-HHHHHHHHHHHHHHH---HHHhhHHhh
Confidence 754 555554444444444 355566554
No 37
>PRK10504 putative transporter; Provisional
Probab=99.89 E-value=6.5e-22 Score=199.43 Aligned_cols=290 Identities=14% Similarity=0.096 Sum_probs=206.5
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+++.+++..+. +....++|.+.++ +|.+..+.+++.+.+.++..+ .+++|+++|| +| ||++++.+.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~g--~r~~~~~~~~~ 84 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADR---VG--VRNIFFTAIVL 84 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--hHHHHHHHHHH
Confidence 566777777777776 5677788888776 899999999999888888777 8899999999 45 67777777777
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc
Q 013568 212 GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA 291 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~ 291 (440)
..++.++++ +.++.+.+++.|++.|++.+...+...+++.|.+|+++|++..++...... +|..+||.++|++.++
T Consensus 85 ~~~~~~~~~-~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~g~l~~~ 160 (471)
T PRK10504 85 FTLGSLFCA-LSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQ---VGPLLGPALGGLLVEY 160 (471)
T ss_pred HHHHHHHHH-HhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH---HHHHhhhHHHHHHHhh
Confidence 777766666 667888899999999999999988999999999999999988888776666 9999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHhhe-eeccccccCCCcCCC----------------CCCCCCccchh---------------
Q 013568 292 YGVRFVFGVTALLPLITSGVAV-LVKEQQVLGPSRRQN----------------LPLGDPSFFES--------------- 339 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~~~~-~~~e~~~~~~~~~~~----------------~~~~~~~~~~~--------------- 339 (440)
.|||+.|++...+..+..+... ..|+.+....+.+.. ...+.......
T Consensus 161 ~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (471)
T PRK10504 161 ASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLL 240 (471)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHH
Confidence 9999999998877666555333 334332211100000 00000000000
Q ss_pred --hHHH----HHHHHHHhcCcchhhhHHHHHhhhcccccc-ceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHh
Q 013568 340 --SKQN----MFQLWEAVKQPNVFLPTLFVFLWQATPHSD-SAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGF 412 (440)
Q Consensus 340 --~~~~----~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l 412 (440)
.++. .....++++||.++..++..+++....... ....+|....+|.++...++...+..++.+++..+.+++
T Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 320 (471)
T PRK10504 241 YLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQV 320 (471)
T ss_pred HHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000124678888777665555544421111 122344444689999999999999999999998999999
Q ss_pred hccCCchhHHHHHHHHHHHHh
Q 013568 413 LKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 413 ~~r~g~r~~l~~~~~~~~~~~ 433 (440)
.||+|+|+++..+.++.++..
T Consensus 321 ~~r~g~~~~~~~~~~~~~~~~ 341 (471)
T PRK10504 321 VNRFGYRRVLVATTLGLALVS 341 (471)
T ss_pred HHHcCchHHHHHHHHHHHHHH
Confidence 999999999887766555443
No 38
>PRK11043 putative transporter; Provisional
Probab=99.89 E-value=3.6e-21 Score=189.96 Aligned_cols=250 Identities=14% Similarity=0.139 Sum_probs=181.3
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
+.+.+.++.+ ++++|.+.++.+++.+++.+++.+ ++++|+++|| +| ||+.+..+.++..++.+++. +.++.+
T Consensus 23 ~~~~p~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr---~g--~r~~~~~~~~~~~~~~~~~~-~~~~~~ 95 (401)
T PRK11043 23 DMYLPAFKAI-QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR---YG--RKPVLLAGLSLFALGSLGML-WVESAA 95 (401)
T ss_pred HHHHhhHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh---cC--CcHHHHHHHHHHHHHHHHHH-HhcCHH
Confidence 4555455554 455899999999999999999888 7899999999 45 77788888777777776666 678888
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.+++.|++.|++.+...+...+++.|.++++++++..+....... +|..++|.+++++.+.+|||+.|++.+++.++
T Consensus 96 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 96 QLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVA---LSPALAPLLGAWLLNHFGWQAIFATLFAITLL 172 (401)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Confidence 899999999999888877888999999998887766555554444 89999999999999999999999998887777
Q ss_pred HHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcc-ccccceeeeeeeccCCC
Q 013568 308 TSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQAT-PHSDSAMFYFTTNELGF 386 (440)
Q Consensus 308 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~g~ 386 (440)
..+..++++|++..++ + ++...+.++.+++|..+...+...+.... .......+++ .+++|+
T Consensus 173 ~~~~~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~ 235 (401)
T PRK11043 173 LILPTLRLKPSKKARK--Q--------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFI-LEQMGY 235 (401)
T ss_pred HHHHHHHcCCCCCccc--c--------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHH-HHHcCC
Confidence 6665555555432111 0 01123455677787765433222221110 0011111222 245799
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHH
Q 013568 387 TPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLAN 425 (440)
Q Consensus 387 s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~ 425 (440)
++.+.|+......++.++|.++.+++.||+++|+.+...
T Consensus 236 s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~ 274 (401)
T PRK11043 236 SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWL 274 (401)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 999999988888889999999999999999988865443
No 39
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.88 E-value=2e-21 Score=193.91 Aligned_cols=273 Identities=18% Similarity=0.221 Sum_probs=191.0
Q ss_pred HHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchhhhHHHHHHHHHHHHH
Q 013568 143 FVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSYLVLSGLLGALSWSLM 219 (440)
Q Consensus 143 ~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~l~~~~~~~~~~~~~~ 219 (440)
+...+. +.....+++++.+++|+++.++|++.++..+..++ +|+.|+++||+ +++| |||++++.+.+..+++.+++
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~G-rrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWG-KFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCC-CcchhHHHhHHHHHHHHHHH
Confidence 333443 56677888899998999999999999999999888 99999999998 5688 88999999888887776666
Q ss_pred Hhhhch------hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhc-ccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh--
Q 013568 220 ATIVES------KYSAALSILLGSLSVAFSDVVVDSMVVERAR-GESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD-- 290 (440)
Q Consensus 220 ~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~-- 290 (440)
. ..++ ...+++.+++.+++.+....+..++..|+.+ +++|++..++...+.. +|.++++.+.+.+..
T Consensus 88 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~---~g~~l~~~~~~~l~~~~ 163 (437)
T TIGR00792 88 F-TTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGAT---LGGLLVAVIVLPLVSYF 163 (437)
T ss_pred H-hCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHh
Confidence 5 3332 2345666778888888888888999999884 5788887777766655 777776666655542
Q ss_pred -----ccchHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHH
Q 013568 291 -----AYGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVF 364 (440)
Q Consensus 291 -----~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 364 (440)
..||++.+.+.+++.++..+ ..++.+|++...+.++++ + .. ..+..++++++|.++..++..+
T Consensus 164 ~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~----~----~~---~~~~~~~l~~~~~~~~~~~~~~ 232 (437)
T TIGR00792 164 GGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEK----K----LS---LKQIFKALFKNDQLLILCLAYL 232 (437)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccccc----C----CC---HHHHHHHHhCCHHHHHHHHHHH
Confidence 46899999998888776655 445667654211111000 0 01 1233456678888777665544
Q ss_pred hhhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q 013568 365 LWQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTAL 432 (440)
Q Consensus 365 ~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~ 432 (440)
+...... ......++....+| ++...+.+.....++.+++.++.+++.||+|+|+.+..+.++.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~ 300 (437)
T TIGR00792 233 FYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 4333211 11222344444455 5566777777788999999999999999999999888776555443
No 40
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.88 E-value=5.4e-21 Score=192.53 Aligned_cols=248 Identities=15% Similarity=0.079 Sum_probs=167.8
Q ss_pred HHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 013568 157 FYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILL 235 (440)
Q Consensus 157 ~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (440)
+.+.+++|++..+.+++.+.+.+++.+ +++.|+++|| +| ||+++..+.++..++.++.+ +.++...++++|++
T Consensus 60 ~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr---~G--~r~~~~~~~~~~~~~~~~~~-~~~s~~~l~~~r~l 133 (476)
T PLN00028 60 PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL---YG--PRYGSAFLLMLTAPAVFCMS-LVSSATGFIAVRFF 133 (476)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--ChHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHH
Confidence 345566999999999998888888887 7899999999 45 66777777777777776666 66788888899999
Q ss_pred HHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh----h-----ccchHHHHHHHHHHHH
Q 013568 236 GSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV----D-----AYGVRFVFGVTALLPL 306 (440)
Q Consensus 236 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~----~-----~~gw~~~f~i~~~~~~ 306 (440)
.|++.+... ....++.|++|+++|+++.++...... +|..+++.+.+.+. + ..|||+.|++.+++.+
T Consensus 134 ~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l 209 (476)
T PLN00028 134 IGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGN---LGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHI 209 (476)
T ss_pred HHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHH
Confidence 999887653 455678999999999999888765444 56666655554432 2 2589999999998887
Q ss_pred HHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcc-ccccceeeeeeeccCC
Q 013568 307 ITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQAT-PHSDSAMFYFTTNELG 385 (440)
Q Consensus 307 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~g 385 (440)
+..+..++++++++..+.++..++ .+ .......+.+++.++++++|...+..++.... .........++.+.+|
T Consensus 210 ~~~l~~~~~~~~~p~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 284 (476)
T PLN00028 210 IMGILVLTLGQDLPDGNYRELKKS--GT---MPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFG 284 (476)
T ss_pred HHHHHHHHHcCcCCCCchhhHHhc--Cc---cccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcC
Confidence 766654444433221110000000 00 00011123456677888877665433322111 1111112233345689
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCch
Q 013568 386 FTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLR 419 (440)
Q Consensus 386 ~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r 419 (440)
+++.+++.+.....++.+++.+++|++.||+++|
T Consensus 285 ~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 285 LSLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 9999999999999999999999999999998765
No 41
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.88 E-value=5.9e-21 Score=189.42 Aligned_cols=277 Identities=14% Similarity=0.092 Sum_probs=194.2
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.+..+.+..+...+. +.....+|.+.++ ++.+..+.|++.+...+++.+ +++.|+++|| +| ||+.+..+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr---~g--~~~~l~~~~~~ 91 (417)
T PRK10489 18 AFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADR---YD--RKKLILLARGT 91 (417)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhh---cC--CceEEEehHHH
Confidence 344444455555555 5666667777666 688999999999999999988 8899999999 45 66677766665
Q ss_pred HHHHHHHHHh----hhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 212 GALSWSLMAT----IVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 212 ~~~~~~~~~~----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
..++...++. ..++++.+++.+++.|++.+...+...+++.|+.|+++|+++.++...... +|..+||.+++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~l~g~ 168 (417)
T PRK10489 92 CGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVR---LGSVISPALGGL 168 (417)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHh---HHHHhHHHHHHH
Confidence 5555443321 135667788899999999988888889999999999999998888877766 999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhh
Q 013568 288 MVDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQ 367 (440)
Q Consensus 288 l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 367 (440)
+.+..||++.|++.++..++..+..+++|+.+.+++++ + +..++..+..+..+++|.++...+..++..
T Consensus 169 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (417)
T PRK10489 169 LIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQPR--E---------HPLRSLLAGFRFLLASPVVGGIALLGGLLT 237 (417)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCccc--c---------cchHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 99888999999988877776666666667654321110 0 011222233445567777655443333322
Q ss_pred ccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q 013568 368 ATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGT 430 (440)
Q Consensus 368 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~ 430 (440)
...........+..+.+|.++...|++....+++.+++.++.+++.||.++++.+..+.++.+
T Consensus 238 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~ 300 (417)
T PRK10489 238 MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSF 300 (417)
T ss_pred HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHH
Confidence 211111122233335589999999999999999999999999999998777766666544433
No 42
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.88 E-value=7.7e-21 Score=186.31 Aligned_cols=275 Identities=13% Similarity=0.059 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHH
Q 013568 136 FAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGA 213 (440)
Q Consensus 136 ~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~ 213 (440)
+.+.+.++..... +...+.+|.|+++ +|+|..++|++.++..+...+ +|++|+++||+ | |++...........
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~---~-~~~~~~~~~~~~~~ 81 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA---N-HIIIALRLLALASA 81 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C-cHHHHHHHHHHHHH
Confidence 3455666666665 6778889999977 799999999999999888877 89999999993 4 32221111111111
Q ss_pred HHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc
Q 013568 214 LSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG 293 (440)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g 293 (440)
+..+.+...+++++.+++.+++.+.+.+...+...++..+. .++|++..+....... +|.+++|.++|++.+++|
T Consensus 82 l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~s---lG~~~g~~l~g~l~~~~g 156 (382)
T TIGR00902 82 IFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGS---AAFIIGSALFGGLIGMFD 156 (382)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHH---HHHHHHHHHHHHHHHHcC
Confidence 22222222457788888899989988888778888887654 3566777777665555 999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccccc
Q 013568 294 VRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHSD 373 (440)
Q Consensus 294 w~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~ 373 (440)
||+.|++.++..++..+.. .+++++++++++++. .....++..+.+|+|++|...+..++........
T Consensus 157 ~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~ 224 (382)
T TIGR00902 157 EQNILAILTAGLAFMLIGF-LIKPTIPPKDAIPED-----------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAY 224 (382)
T ss_pred hhHHHHHHHHHHHHHHHHH-HcCCCCCCCcccccc-----------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 9999988766533333333 333332111111000 0011234567789999888776666544422111
Q ss_pred cee-eeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHh
Q 013568 374 SAM-FYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 374 ~~~-~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~ 433 (440)
..+ ..+. +++|.++..+|.+..+..++.+++.++.+++.||+|.|+.+..+.++..+..
T Consensus 225 ~~~~~~~l-~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~ 284 (382)
T TIGR00902 225 YGFSAIYW-QAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRW 284 (382)
T ss_pred HHHHHHHH-HHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 122 2222 5689999999999999999999999999999999999999888777766543
No 43
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.88 E-value=4.2e-21 Score=188.56 Aligned_cols=269 Identities=10% Similarity=0.068 Sum_probs=176.6
Q ss_pred cHHHHHHHHHHHHHh-hhHHHH-HHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLA-VNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~-l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
+.+.+....+..++. ...... .+.+.++++|+|.++.+++.++..+.+.+ +.+.|++.|| +| .|+++.++.+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr---~G--~R~v~~~~~l 108 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI---FG--GRRWTVFSTA 108 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--ChHHHHHHHH
Confidence 444444444544444 444444 44444546999999999999999999888 6888999999 56 5556677777
Q ss_pred HHHHHHHHHHhhh-----chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH
Q 013568 211 LGALSWSLMATIV-----ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 211 ~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~ 285 (440)
+..+..+.++ ++ ++++.+++.|++.|++ +...+.....+++++|+++||++.++..... ++|..+++++.
T Consensus 109 l~~i~~~~~~-~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G---~~G~~l~~~l~ 183 (462)
T PRK15034 109 ILIIPCVWLG-IAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLG---NLGVSVMQLVA 183 (462)
T ss_pred HHHHHHHHHH-HHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHH---hhHHHHHHHHH
Confidence 7777766666 43 6888999999999998 5577788999999999999999999885222 25555444444
Q ss_pred HHhh-----h-------------ccchHHHHHHHHHHHHHHHHhhe-eeccccccCCCcCCCCCCCCCccchhhHHHHHH
Q 013568 286 GSMV-----D-------------AYGVRFVFGVTALLPLITSGVAV-LVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQ 346 (440)
Q Consensus 286 g~l~-----~-------------~~gw~~~f~i~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (440)
..+. . ..+|+.++++.+++.++..+..+ +.++.+. . +...++
T Consensus 184 p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~----~---------------~~~~~~ 244 (462)
T PRK15034 184 PLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS----S---------------RASIAD 244 (462)
T ss_pred HHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc----c---------------ccCHHH
Confidence 3322 2 33478877777776666655444 3333221 0 112345
Q ss_pred HHHHhcCcchhhhHHHHHh-hhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHH
Q 013568 347 LWEAVKQPNVFLPTLFVFL-WQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLAN 425 (440)
Q Consensus 347 ~~~~l~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~ 425 (440)
..+.+|+|.+|..+++.++ |.........++++..+.+ +............+...++..++|+++||+|+++++.++
T Consensus 245 ~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~ 322 (462)
T PRK15034 245 QLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLIN 322 (462)
T ss_pred HHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHH
Confidence 6678999999988766555 4332111112223333333 332222223344567778889999999999999998887
Q ss_pred HHHHHHHh
Q 013568 426 TIFGTALG 433 (440)
Q Consensus 426 ~~~~~~~~ 433 (440)
.++.+++.
T Consensus 323 ~i~~~i~~ 330 (462)
T PRK15034 323 FIFMAIFS 330 (462)
T ss_pred HHHHHHHH
Confidence 76555544
No 44
>PRK03699 putative transporter; Provisional
Probab=99.88 E-value=2.7e-21 Score=190.40 Aligned_cols=271 Identities=10% Similarity=0.102 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
.+...+.++..+.. ......+|.+. +++|+|.++.+++.+...+++.+ +++.|+++|| +| ||+.+..+.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr---~g--~r~~~~~~~~~~ 82 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIA-EYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI---IP--LKRQLIFGFALM 82 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hh--HHHHHHHHHHHH
Confidence 44455566666555 45555566655 55899999999999999999888 7888999999 45 777788887777
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh-c
Q 013568 213 ALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD-A 291 (440)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~-~ 291 (440)
.++.++++ +.++.+.++++|++.|++.+...+....++.|++|+++|+.+.+....... +|..++|.+.+++.. .
T Consensus 83 ~i~~~l~~-~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~---~g~~~~~~~~~~l~~~~ 158 (394)
T PRK03699 83 ILAVAGLM-FSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFS---MAGMIFPIIAAYLLARS 158 (394)
T ss_pred HHHHHHHH-HcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcc
Confidence 77777777 678888889999999999998888888999999999889888777766666 888999999888764 5
Q ss_pred cchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc
Q 013568 292 YGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH 371 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 371 (440)
.|||+.|.+.+++.++..+..++.+.++.. ++++++ . + +. . +...++.++...+..+++.....
T Consensus 159 ~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~-~---~---~~----~----~~~~~~~~~~~~~~~~~~~~~~~ 222 (394)
T PRK03699 159 IEWYWVYACIGLVYVAIFILTLFSEFPALG-KHAPKA-D---K---PV----A----KEKWGIGVLFLAIAALLYILAQL 222 (394)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCcccc-ccCccc-c---C---cc----c----cccCChHHHHHHHHHHHHHHHHH
Confidence 799999999887776655443332211111 110000 0 0 00 0 00123445544443344333111
Q ss_pred c-cceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 372 S-DSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 372 ~-~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
. ....+.+..+.+|+++.+.+.+.....++.++|.++.+++.||+++|+.+.....+.++
T Consensus 223 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 223 TFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALV 283 (394)
T ss_pred HHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 1 12223344467899999999999999999999999999999999999888776554443
No 45
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.88 E-value=7.9e-21 Score=187.50 Aligned_cols=280 Identities=12% Similarity=0.107 Sum_probs=198.1
Q ss_pred cHHHHHHHHHHHHHhh-hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVLG-LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.++..++..++.. .....+ +.+++++|++..+.|++.+.+.+++.+ .++.|++.|| +| ||+.++++.++
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~-~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r---~G--~r~~~~~g~~l 77 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMV-PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK---LS--YKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--chHHHHHHHHH
Confidence 4566777788888874 444444 455667999999999999999999988 7899999999 45 88888888888
Q ss_pred HHHHHHHHHh--hhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 212 GALSWSLMAT--IVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 212 ~~~~~~~~~~--~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
.+++..++.. ..++++.+++.+++.|+|.+...+..+.++.++.|+++++++.++.+.... +|..+||.+++.+.
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNP---FGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 8877666431 235788889999999999999999999999999999999988888887777 99999999988774
Q ss_pred h--------------------------ccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHH
Q 013568 290 D--------------------------AYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQN 343 (440)
Q Consensus 290 ~--------------------------~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (440)
. ..+||++|++.+++.++..+...+.+.++.+++++++ +..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~----------~~~~-- 222 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQ----------ISFS-- 222 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc----------ccch--
Confidence 2 2469999999888766655443333322211110000 0111
Q ss_pred HHHHHHHhcCcchhhhHHHHHhhhcccccccee-eeeeec-cCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhH
Q 013568 344 MFQLWEAVKQPNVFLPTLFVFLWQATPHSDSAM-FYFTTN-ELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKI 421 (440)
Q Consensus 344 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~-~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~ 421 (440)
.+..+.+|+|.++...+..++|...+.....+ ..|..+ ..+.+....+........+..+|+++++++.||+++|+.
T Consensus 223 -~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~ 301 (410)
T TIGR00885 223 -ASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV 301 (410)
T ss_pred -hhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 12345678888887777777776643222111 111111 224444445555666667888999999999999999998
Q ss_pred HHHHHHHHHHHhhh
Q 013568 422 FLANTIFGTALGMT 435 (440)
Q Consensus 422 l~~~~~~~~~~~~~ 435 (440)
+.++.++++++.++
T Consensus 302 l~i~~~~~~~~~ll 315 (410)
T TIGR00885 302 LMAYAIIGMALCLG 315 (410)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777766665543
No 46
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.88 E-value=6.9e-21 Score=187.98 Aligned_cols=270 Identities=14% Similarity=0.059 Sum_probs=184.8
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.+....+..+..... +.....+++++++ +|++..+.|++.+.+.+++.+ ++++|+++|| +| ||+.+..+..+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr---~g--~k~~l~~~~~~ 87 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEI---IG--PLKTMMIGLLL 87 (402)
T ss_pred hhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH---cC--cHHHHHHHHHH
Confidence 344455555554444 4556677888866 799999999999999999888 8999999999 45 77777777777
Q ss_pred HHHHHHHHHh--h-hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHH-HHHHHHHHH
Q 013568 212 GALSWSLMAT--I-VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGG-IVSSYFSGS 287 (440)
Q Consensus 212 ~~~~~~~~~~--~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~-~ig~~i~g~ 287 (440)
..++.+++.. . ..+.+.+++.|++.|++.+...+...+.+.+.+++++|++++++...+.. +|. +++|.++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~g~~~~g~~~~~~ 164 (402)
T TIGR00897 88 WCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYS---IGIGVFGSYYSSY 164 (402)
T ss_pred HHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHh
Confidence 6666543321 2 34677778899999999888777778888999999999999999887776 886 689999999
Q ss_pred hhhccchHHHHHHHHHHHHHHHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhh
Q 013568 288 MVDAYGVRFVFGVTALLPLITSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLW 366 (440)
Q Consensus 288 l~~~~gw~~~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 366 (440)
+.+.+||+..+|....+..+..++ .++.++.+.+++.+ ++ ++.++..+..+.++++|.++...+..++.
T Consensus 165 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (402)
T TIGR00897 165 AIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ-TR---------EKFSELGKAATILFTNPNVLLGGMVRIIN 234 (402)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc-CC---------cchhhHHHHHHHHHcChhHHHHHHHHHHH
Confidence 988889776666544433333332 33344432211111 00 01112223455677899887665443332
Q ss_pred hccccccce-eeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHH
Q 013568 367 QATPHSDSA-MFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFL 423 (440)
Q Consensus 367 ~~~~~~~~~-~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~ 423 (440)
......... .+++. +++|+++.+.+.+.....++.+++.++.+++.||+++|+.+.
T Consensus 235 ~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 291 (402)
T TIGR00897 235 TIGLFGFAVFLPMFV-AELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVR 291 (402)
T ss_pred HHHHHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 221111111 12222 568999999888888889999999999999999999887653
No 47
>PRK10054 putative transporter; Provisional
Probab=99.88 E-value=5.5e-21 Score=188.06 Aligned_cols=272 Identities=13% Similarity=0.092 Sum_probs=195.0
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+.+..++.... +...+.++.++++++|++..++|++.++..+...+ +++.|+++|| +| ||+++.++.++
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr---~g--~k~~~~~~~~~ 82 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK---FD--KKRYMLLAITA 82 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cC--cchhHHHHHHH
Confidence 566666777777666 67777899999888999999999999998888777 8999999999 45 67777777777
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc
Q 013568 212 GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA 291 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~ 291 (440)
..++.+.++ +.++++.+++++++.|.+.+...+...++..|..++++|++..++...... +|.++||.+++++.+
T Consensus 83 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---lg~~igp~l~~~l~~- 157 (395)
T PRK10054 83 FASGFIAIP-LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLN---IGWTVGPPLGTLLVM- 157 (395)
T ss_pred HHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH-
Confidence 777766666 667777777788888887777778889999999999999988887776665 999999999998875
Q ss_pred cchHHHHHHHHHHHHHHHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc
Q 013568 292 YGVRFVFGVTALLPLITSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP 370 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~ 370 (440)
.||+..|++.+++.++..+. .+++++++.++++++ ++ ..+.++.+++|.++...+..++.....
T Consensus 158 ~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~ 222 (395)
T PRK10054 158 QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATET--------------GS-VWSPSVLLQDKALLWFTCSGFLASFVS 222 (395)
T ss_pred hccCcHHHHHHHHHHHHHHHHHHHHhccccccccch--------------hh-hhhhhhhccCceehHHHHHHHHHHHHH
Confidence 79999999988777766543 344555432211100 01 122356778888877665544433211
Q ss_pred ccc-ceeeeeee--ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q 013568 371 HSD-SAMFYFTT--NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGT 430 (440)
Q Consensus 371 ~~~-~~~~~~~~--~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~ 430 (440)
... .....+.. ++.+.+....+.+.....+..+...+..+++.||+++|+.+..+.++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~ 285 (395)
T PRK10054 223 GAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFV 285 (395)
T ss_pred HHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHH
Confidence 111 11111111 3456667777877777777777777888899999999988776654443
No 48
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.88 E-value=2.1e-20 Score=183.76 Aligned_cols=275 Identities=21% Similarity=0.265 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhcccc--CcCCCCcchhhhHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSL--PLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~--~~~G~~rr~~l~~~~~~ 211 (440)
+..+...|+.+++. ++..+.+|.++++ .|+|.+++|++ ++..+++.++++++++.||+ ++.| +||.+++...++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~-~~~~l~~~~~~l~~p~~~~~~~~~~g-~r~~~i~~~~~~ 79 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFL-PLVGLPWVVKFLWAPLVDNWWSWRLG-RRRSWVLPMQCL 79 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHH-HHHHHHHHHHHHHHHHHhccccccCC-cchhHHHHHHHH
Confidence 45678889999998 7888999999998 59999999986 44556666666666666664 3467 666665555443
Q ss_pred HHHHHHHHHhh--hch-hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 212 GALSWSLMATI--VES-KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 212 ~~~~~~~~~~~--~~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
..++...++.+ ..+ ....+...++.++..+..++..+++..|..++++++...+....+.. +|.++|+...+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~---lG~~~g~~~~~~l 156 (390)
T TIGR02718 80 VSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVM---IGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 33332233311 112 22334455666777888888999999998888888877777766656 8999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhc
Q 013568 289 VDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQA 368 (440)
Q Consensus 289 ~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~ 368 (440)
.+++|||..|++.+++.++..+..++++|++.++++ ++ +...++.++.+|+|.++..++..+++..
T Consensus 157 ~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 222 (390)
T TIGR02718 157 FGKFGQRPAFLLVACVPLASLVCVLWLKDRAVASPE-AP-------------LARRASLFRFFRRPLAWSLLALALLSAM 222 (390)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccc-cc-------------hhhHHHHHHHHcCcCHHHHHHHHHHHHH
Confidence 999999999999998887766655555443321110 00 1122346678889987776666555544
Q ss_pred cccccceeeeeeeccCCCChhhHHHHHHHHHH-HHHHHHHHHHHhhccCCchhHHHHHHHHH
Q 013568 369 TPHSDSAMFYFTTNELGFTPEFLGRVKFVTSV-ASLLGVGLYNGFLKNVPLRKIFLANTIFG 429 (440)
Q Consensus 369 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i-~~~~g~~~~~~l~~r~g~r~~l~~~~~~~ 429 (440)
.......+...+.++.|++++++|.+....++ ..+++.++.+++.||+|+|+.+..+.++.
T Consensus 223 ~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~ 284 (390)
T TIGR02718 223 TAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLA 284 (390)
T ss_pred HHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 22112222212224579999999998887764 67788999999999999999888765544
No 49
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=1e-20 Score=186.33 Aligned_cols=256 Identities=13% Similarity=0.098 Sum_probs=186.3
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
....+++..+. ......+|.+.++ +|+|..+.+++.+++.+++.+ ++++|+++|| +| ||+.+..+.++..++
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr---~g--rr~~~~~~~~~~~~~ 86 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR---VG--RRPVILVGMSIFILG 86 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh---cC--ChHHHHHHHHHHHHH
Confidence 33333333333 4555556665555 899999999999999999988 8899999999 45 777888887777777
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchH
Q 013568 216 WSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVR 295 (440)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~ 295 (440)
.+... ..++.+.+++.|++.|++.+...+....+..|.+++++++++.++.+.+.. +|..++|.+++.+.+..|||
T Consensus 87 ~~~~~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~i~~~l~~~~g~~ 162 (394)
T PRK11652 87 TLVAL-FAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGIL---VSPLLAPLIGGLLTTLFGWR 162 (394)
T ss_pred HHHHH-HHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhccChH
Confidence 76666 678888899999999999988888888889999998888888888877776 89999999999999889999
Q ss_pred HHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc-ccc
Q 013568 296 FVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP-HSD 373 (440)
Q Consensus 296 ~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~-~~~ 373 (440)
+.|++.+++.++..+ ..++.||++..+++ ..+..+..++.+++|.++...+..+...... ...
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETRPADAR---------------RTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFE 227 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCccccc---------------hhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 999998876665544 34566765432110 0112344556778887765544333322110 011
Q ss_pred ceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 013568 374 SAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPL 418 (440)
Q Consensus 374 ~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~ 418 (440)
.....+..+.+|+++.+.+++.....++.+++.++.+++.||.++
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 272 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST 272 (394)
T ss_pred HhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112223335589999999999888889999999999999999873
No 50
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.87 E-value=1.6e-20 Score=184.13 Aligned_cols=265 Identities=17% Similarity=0.110 Sum_probs=182.2
Q ss_pred HHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcc---hhhhHHHHHHHHHH
Q 013568 142 YFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRR---SYLVLSGLLGALSW 216 (440)
Q Consensus 142 ~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr---~~l~~~~~~~~~~~ 216 (440)
++...+. +...+.+|.++++ +|.|..++|++.+++.++..+ +|++|+++||+ | |++ +.+.+... +..
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~---g-~~~~~~~~~~~~~~---~~~ 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP---S-QLIPALRLLALLTL---LFA 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh---c-chHHHHHHHHHHHH---HHH
Confidence 5555554 6778888999977 799999999999999999888 89999999994 4 321 22222211 111
Q ss_pred HHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHH
Q 013568 217 SLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRF 296 (440)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~ 296 (440)
..+....++.+.+++.|++.|++.+...+...++..++. ++|++..+....... +|..+||.+++++.+++|||.
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~--~~~~~a~~~~~~~~~---lg~~igp~lgg~l~~~~g~~~ 159 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQ--KQIGLDYGKVRLWGS---IAFVIGSALTGKLVSWFGEQA 159 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHHH--hhccCCcchHHHHHH---HHHHHHHHHHHHHHHHcChhH
Confidence 222224577888888999999998888888888888773 446666666665555 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccccccce-
Q 013568 297 VFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHSDSA- 375 (440)
Q Consensus 297 ~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~- 375 (440)
.|++.++..++..+..++.||++++.+++ +. .++..++.++.+|+|.+|...+..++..........
T Consensus 160 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 227 (382)
T PRK11128 160 ILWILTAGVASMLLGQLLRPTIMPQGESR-QQ-----------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGF 227 (382)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCccccc-cc-----------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHH
Confidence 99988765554444444445432211110 00 001123456778899888766555544332111111
Q ss_pred eeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q 013568 376 MFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTAL 432 (440)
Q Consensus 376 ~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~ 432 (440)
...+. ++.|+++.+.|.+.....++.+++.++.+++.||+++|+.+..+.++.++.
T Consensus 228 ~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~ 283 (382)
T PRK11128 228 SAIYW-QAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVR 283 (382)
T ss_pred HHHHH-HHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 11222 468999999999999888899999999999999999999988776665543
No 51
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.87 E-value=1.8e-20 Score=184.89 Aligned_cols=267 Identities=13% Similarity=0.041 Sum_probs=181.0
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
++..+.+..+...+. ++....++.++++++|.|..+.|++.+++.+++.+ +|+.|+++|| +| ||+.+..+.++
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr---~g--~r~~l~~~~~~ 90 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADT---LG--PKKAVVFGLCG 90 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhc---cC--CcchHHHHHHH
Confidence 566777777777776 67788888888888999999999999999999988 8999999999 45 77778887766
Q ss_pred HHHHHHHHHh--hhc-----hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 212 GALSWSLMAT--IVE-----SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 212 ~~~~~~~~~~--~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
..++.+.++. ..+ +...+++.|++.|++.+...+....++.|..++++|+++.++.+.... +|.++|+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~g~~~g~~l 167 (399)
T PRK05122 91 CALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATY---GALAIGAPL 167 (399)
T ss_pred HHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhh---HHHHHHHHH
Confidence 6655443331 111 455788999999999999988889999999999999999998877776 899999999
Q ss_pred HHHhhhccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHH
Q 013568 285 SGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVF 364 (440)
Q Consensus 285 ~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 364 (440)
++.+.+.+||++.+++.+++.++..+.....|+++. .+++ + .+.++..++ ..+... ...++.+
T Consensus 168 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~----~~~~~~~~~---~~~~~~--~~~~~~~ 230 (399)
T PRK05122 168 GVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP---VKGE-----R----LPFRRVLGR---VWPYGM--GLALASI 230 (399)
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCcc-----c----hhHHHHHHH---HHHHHH--HHHHHHH
Confidence 999999999999998877665544333322222211 1000 0 011111111 111110 0111111
Q ss_pred hhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 365 LWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
.+.. .......++ .+.|+ ...+......+++.+++.++.+++.||+++|+.+..+.++.++
T Consensus 231 ~~~~---~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~ 291 (399)
T PRK05122 231 GFGT---IATFITLYY-AARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEIL 291 (399)
T ss_pred HHHH---HHHHHHHHH-HHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 1111 001111111 23454 2445666778888899999999999999999888766554443
No 52
>TIGR00895 2A0115 benzoate transport.
Probab=99.87 E-value=3.9e-21 Score=188.81 Aligned_cols=277 Identities=16% Similarity=0.165 Sum_probs=184.6
Q ss_pred HHHHHHHHHHhh-hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVLG-LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~~-~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
..+.++..++.. ......|. +.+++|.+..+.+++.++..++..+ .++.|+++|| +| ||+.+..+.++..++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~g--~~~~~~~~~~~~~~~ 95 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPA-ISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR---IG--RKRVLLWSILLFSVF 95 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHH-HhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH---hh--hHHHHHHHHHHHHHH
Confidence 334445555543 33434444 4555899999999999999998888 7899999999 45 777888887777777
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchH
Q 013568 216 WSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVR 295 (440)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~ 295 (440)
.+++. ..++.+.+++.+++.|++.+...+...+++.|++|+++|+++.++...... +|..+++.+++++.+..||+
T Consensus 96 ~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~g~~~~~~~~~~l~~~~g~~ 171 (398)
T TIGR00895 96 TLLCA-LATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYP---IGAAVGGFLAGWLIPVFGWR 171 (398)
T ss_pred HHHHH-HccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHH---HHHHHHHHHHHHHhhcccce
Confidence 76666 677888889999999999999999999999999999999999999888777 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hheeeccccccCCCcCC---------------CCCCCCCccchhhHHHHHHHHHHh-cC---cc
Q 013568 296 FVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQ---------------NLPLGDPSFFESSKQNMFQLWEAV-KQ---PN 355 (440)
Q Consensus 296 ~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l-~~---~~ 355 (440)
+.|++.+++.++..+ ..+++||++.....+++ .+........+...+..++..+.+ ++ +.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARI 251 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHH
Confidence 999988755554444 45566765421100000 000000000000011112222222 22 22
Q ss_pred hhhhHHHHHhhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHH
Q 013568 356 VFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLA 424 (440)
Q Consensus 356 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~ 424 (440)
.+...+..++..........+..++.+++|+++.+.+.......++.+++.++.+++.||+++|+.+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (398)
T TIGR00895 252 TVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALL 320 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Confidence 222221112211111111111112335789999999999999999999999999999999998855443
No 53
>PRK12382 putative transporter; Provisional
Probab=99.87 E-value=3.9e-20 Score=182.01 Aligned_cols=268 Identities=13% Similarity=0.061 Sum_probs=177.2
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+.+..+...+. +...+.+|.++++++|+|..++|++.+++.+++.+ +|++|+++|| +| ||+.++.+.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr---~g--~r~~l~~~~~~ 90 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ---YG--AKRSALQGMLA 90 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh---hc--chHHHHHHHHH
Confidence 555555555555555 67777888888878999999999999999999988 8999999999 45 67777776665
Q ss_pred HHHHHHHH---Hh----hhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 212 GALSWSLM---AT----IVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 212 ~~~~~~~~---~~----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
..++.+.. +. ...+++.++++|++.|++.+...+...+++.|+.|+++|+++.++.+.+.. +|..+||.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~---~g~~~g~~~ 167 (392)
T PRK12382 91 CGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMY---GALAAGAPL 167 (392)
T ss_pred HHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHH---HHHHHHHHH
Confidence 55443221 11 124667889999999999998888888999999999999999999887777 899999999
Q ss_pred HHHhhhccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHH
Q 013568 285 SGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVF 364 (440)
Q Consensus 285 ~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 364 (440)
++++.+.+||++.+.+..+..++.++.....||.+.+ +++ + ++.++ ..+.+..+.+... ++.+
T Consensus 168 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~----~~~~~----~~~~~~~~~~~~~-l~~~ 230 (392)
T PRK12382 168 GLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPAH---AGE-----R----PSLWS----VVGLIWKPGLGLA-LQGV 230 (392)
T ss_pred HHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCCC---ccc-----C----chHHH----HHHHHHHhHHHHH-HHHH
Confidence 9999998999998876655444333322222332111 000 0 01111 1111222222111 1111
Q ss_pred hhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q 013568 365 LWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTAL 432 (440)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~ 432 (440)
.+.. .......++ ++.|++ ..+......+++.+++.++.+++.||+|+|+.+..+..+.++.
T Consensus 231 ~~~~---~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~ 292 (392)
T PRK12382 231 GFAV---IGTFVSLYF-ASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVG 292 (392)
T ss_pred HHhH---HHHHHHHHH-HhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHH
Confidence 1111 011111111 234554 3456666677888899999999999999998887766554443
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.87 E-value=1.5e-20 Score=184.30 Aligned_cols=268 Identities=13% Similarity=0.098 Sum_probs=185.6
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+++..+...+. +.....+|.+.++ +|+|..++|++.+.+.+++.+ ++++|+++|| +| ||+.+..+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr---~g--~k~~~~~~~~~ 80 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR---IG--FNRSYYLASLI 80 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH---HH--HHHHHHHHHHH
Confidence 466677777777776 6777788888876 799999999999999999988 8899999999 45 77788888888
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc
Q 013568 212 GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA 291 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~ 291 (440)
..++..+++ ..++++.++++|++.|++.+...+...+.+.+..++++|+++.+.+..+.. +|..+|+.+++.+.+.
T Consensus 81 ~~~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 81 FAAGCAGLG-LMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYY---LGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH---HHHHHHHHHHhccccc
Confidence 887777766 678889999999999999998888888888899999999999888887777 9999999999988765
Q ss_pred cchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc
Q 013568 292 YGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH 371 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 371 (440)
..|...+ ..+........+ ++.+.+++..+ +++ . ++.++.+++|..+......+.......
T Consensus 157 ~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~-~~~-----------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (381)
T PRK03633 157 LMSVLPW-VTGLVLAAILPL-LFTRILNQQAE-NHD-----------S-----TSIWPMLKLRQARLGVNGCIISGIVLG 217 (381)
T ss_pred ccchHHH-HHHHHHHHHHHH-HHhcccCCCCC-CCC-----------C-----CCHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 4333222 222222111111 11122111111 000 0 112345667765544322222211100
Q ss_pred -ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 372 -SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 372 -~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
.......+. ++.|.++..+|.......++.+++.+..+++.||+++|+.+..+..+..+
T Consensus 218 ~~~~~lp~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~ 277 (381)
T PRK03633 218 SLYGLMPLYL-NHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVIL 277 (381)
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHH
Confidence 111112222 45689999999988888899999999999999999999888765544443
No 55
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.87 E-value=3.7e-20 Score=182.21 Aligned_cols=271 Identities=16% Similarity=0.179 Sum_probs=174.6
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhh-hHHHHhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSL-PWLIKPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l-~~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
+.+.+.+.+..+..++. ....+.++.++++++|+|.+++|++.+...+ ++.++++.|.++|| +| +||.++..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr---~g-~r~~~~~~~~ 89 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDK---RG-DRKSLIVFCC 89 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cc-chhHHHHHHH
Confidence 44667777778888887 6778889999998899999999998766544 56666666555999 56 5666566665
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccc--cchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 210 LLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQS--VSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~--~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
++..+...+.+ ++++++.+++.+.+.+...+...+...++..|..++++|. ..+++.+.+.. +|.++||.++++
T Consensus 90 ~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---lg~~~g~~i~~~ 165 (393)
T PRK15011 90 LLGVLACTLFA-WNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVS---LAWVIGPPLAYA 165 (393)
T ss_pred HHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH---HHHHHhhHHHHH
Confidence 55555555555 5677776655554444444566777788888877665442 12234444444 999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcc-hhhhH-HHHH
Q 013568 288 MVDAYGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPN-VFLPT-LFVF 364 (440)
Q Consensus 288 l~~~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~-l~~~ 364 (440)
+.+++|||+.|++.++..++..+ ..+++||.+..++..+++ . +. . .++++ .+... +...
T Consensus 166 l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~-------~---~~~~~~~~~~~~~~~~ 227 (393)
T PRK15011 166 LAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGT-L-------EA-------P---RRNRRDTLLLFVICTL 227 (393)
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccccc-c-------cc-------c---ccccccHHHHHHHHHH
Confidence 99999999999998877766655 445677764322111000 0 00 0 01211 12211 1111
Q ss_pred hhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHH
Q 013568 365 LWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIF 428 (440)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~ 428 (440)
.+..........+.+..+.+|+++.+.+.+.....++.+++.++.+++.||+++|+.+..+.+.
T Consensus 228 ~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~ 291 (393)
T PRK15011 228 MWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVA 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 1111000111223334456899998999888777778888999999999999999887765443
No 56
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.86 E-value=2.7e-20 Score=188.86 Aligned_cols=285 Identities=14% Similarity=0.181 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHHhh-hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 135 NFAVAMVYFVQGVLG-LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 135 ~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
+..+++.++...+.. .....++ .+.+++|++..+.+++.+.+.+++.+ +++.|+++|| +| ||+.++.+.++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~g--~r~~~~~~~~~~ 95 (496)
T PRK03893 22 FSAAWLGYLLDGFDFVLITLVLT-EVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDR---YG--RRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--cHHHHHHHHHHH
Confidence 445666777777764 4444444 45566899999999999999999888 7889999999 45 777788887777
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc
Q 013568 213 ALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY 292 (440)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~ 292 (440)
+++.++++ +.++.+.+++.|++.|++.+...+....++.|.+++++|+++.++...... +|..+++.+++++.+.+
T Consensus 96 ~~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 96 SVGTLACG-FAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFS---IGAVVAAQVYSLVVPVW 171 (496)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhccC
Confidence 77777777 678888999999999999999999999999999999999998888887777 99999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchh----hHHHHHH---------HHHHhc-------
Q 013568 293 GVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFES----SKQNMFQ---------LWEAVK------- 352 (440)
Q Consensus 293 gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------~~~~l~------- 352 (440)
|||+.|++.++..++.++....+||++..++.+++.... ++..+. .+..... ....+.
T Consensus 172 ~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (496)
T PRK03893 172 GWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPV--RTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAA 249 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccc--hhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 999999876554443333344556543321111111000 000000 0000000 000000
Q ss_pred --------------------C-cc--hhhhHHHHHhhhcccc-cc-ceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHH
Q 013568 353 --------------------Q-PN--VFLPTLFVFLWQATPH-SD-SAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVG 407 (440)
Q Consensus 353 --------------------~-~~--~~~~~l~~~~~~~~~~-~~-~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~ 407 (440)
. ++ ....+....+...... .. .....+..+++|+++.+++.+.....++.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~ 329 (496)
T PRK03893 250 IVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCC 329 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0000000000001000 00 1112333357899999999999999999999999
Q ss_pred HHHHhhccCCchhHHHHHHHHHHH
Q 013568 408 LYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 408 ~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
+.+++.||+++|+.+..+.++..+
T Consensus 330 ~~g~l~dr~g~~~~~~~~~~~~~~ 353 (496)
T PRK03893 330 VGGFLGDWLGTRKAYVCSLLISQL 353 (496)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHH
Confidence 999999999999888776554443
No 57
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=1.1e-20 Score=189.46 Aligned_cols=256 Identities=12% Similarity=0.006 Sum_probs=172.7
Q ss_pred HHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhh---hchhHHHHH
Q 013568 156 NFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATI---VESKYSAAL 231 (440)
Q Consensus 156 ~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~ 231 (440)
.+++.++ |++..+.+++.+.+.+++.+ ++++|+++|| +| ||+++..+.++.+++.+.++.. ..+...+++
T Consensus 52 ~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr---~g--~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 125 (452)
T PRK11273 52 MPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR---SN--PRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFV 125 (452)
T ss_pred hHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc---cC--CchhHHHHHHHHHHHHHHHHhhhcccccHHHHHH
Confidence 3456776 99999999999999999988 8999999999 45 6778888877777776666522 135667788
Q ss_pred HHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHH-HHHHHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 013568 232 SILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGG-IVSSYFSGSMVDAYGVRFVFGVTALLPLITSG 310 (440)
Q Consensus 232 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~-~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~ 310 (440)
.|++.|++.+...+.....+.|++|+++|+++.++++.+.. +|. +++++++..+....|||+.|++.+++.++..+
T Consensus 126 ~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~ 202 (452)
T PRK11273 126 LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHN---VGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVAL 202 (452)
T ss_pred HHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 89999999998878788889999999999999998877666 775 44555444443345999999998877666544
Q ss_pred -hheeeccccccCCCcCC----CCCCCCCccchhhHHHHHH--HHHHhcCcchhhhHHHHHhhhccc-cccceeeeeeec
Q 013568 311 -VAVLVKEQQVLGPSRRQ----NLPLGDPSFFESSKQNMFQ--LWEAVKQPNVFLPTLFVFLWQATP-HSDSAMFYFTTN 382 (440)
Q Consensus 311 -~~~~~~e~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~ 382 (440)
..+++||+++.....+. .+........+..+...++ ....++++.+|...+..++..... ......+.++.+
T Consensus 203 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~ 282 (452)
T PRK11273 203 FAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKE 282 (452)
T ss_pred HHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567776543111000 0000000000000001112 123568888887665554433211 112222344445
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC--Cchh
Q 013568 383 ELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNV--PLRK 420 (440)
Q Consensus 383 ~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~--g~r~ 420 (440)
..|++..+.+.+..+..++.+++.++.|++.||+ ++|.
T Consensus 283 ~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 283 VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG 322 (452)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 6789988999888888999999999999999998 4443
No 58
>PRK09952 shikimate transporter; Provisional
Probab=99.86 E-value=2.1e-20 Score=186.52 Aligned_cols=277 Identities=15% Similarity=0.198 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhc--CCChhhhHHHHH--hhhhhH---HH-HhhhhhhccccCcCCCCcchhh
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDL--HLDPAETAVISG--FSSLPW---LI-KPLYGFISDSLPLFGYRRRSYL 205 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~--g~s~~~~g~~~s--~~~l~~---~~-~~~~g~l~Dr~~~~G~~rr~~l 205 (440)
++...+.++..+++ .......+.++.+++ +.++. .+++.+ .+.+++ .+ +++.|+++|| +| ||+.+
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr---~G--rr~~l 97 (438)
T PRK09952 24 ALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDR---LG--RKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHh---hc--cHHHH
Confidence 34455566677776 344444555566555 67766 455432 223333 33 5677999999 45 78888
Q ss_pred hHHHHHHHHHHHHHHhhhchhH--------HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhH
Q 013568 206 VLSGLLGALSWSLMATIVESKY--------SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFG 277 (440)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g 277 (440)
+++.++..++.++++ +++++. .++++|+++|++.+...+....++.|++|+++|++..+....+.. +|
T Consensus 98 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~---~G 173 (438)
T PRK09952 98 MLTVWMMGIATALIG-LLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYG---VG 173 (438)
T ss_pred HHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHH---HH
Confidence 888888888888887 677765 478899999999999988889999999999999988887777766 88
Q ss_pred HHHHHHHHHHhh--------hccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHH
Q 013568 278 GIVSSYFSGSMV--------DAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWE 349 (440)
Q Consensus 278 ~~ig~~i~g~l~--------~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (440)
.+++..+..++. ..+|||++|++.++..++...+....||++...+.+.+.++ .+ +. ......
T Consensus 174 ~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~-~~----~~----~~~~~~ 244 (438)
T PRK09952 174 LLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA-AK----KR----IPVIEA 244 (438)
T ss_pred HHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccc-cc----cc----CCHHHH
Confidence 888877766654 25799999998877665544344456665432111101000 00 00 001112
Q ss_pred HhcCcchhhhHHH-HHhhhcc-ccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHH
Q 013568 350 AVKQPNVFLPTLF-VFLWQAT-PHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTI 427 (440)
Q Consensus 350 ~l~~~~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~ 427 (440)
.+++|+.+...+. .++.... .........+..+.+|++......+....++..+++.++.+++.||+|+|+.+..+.+
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~ 324 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGAL 324 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 4456665554321 1111111 0011112233345678888766555556677778888999999999999998877655
Q ss_pred HHH
Q 013568 428 FGT 430 (440)
Q Consensus 428 ~~~ 430 (440)
+.+
T Consensus 325 ~~~ 327 (438)
T PRK09952 325 IGT 327 (438)
T ss_pred HHH
Confidence 433
No 59
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.86 E-value=4.2e-20 Score=191.79 Aligned_cols=172 Identities=16% Similarity=0.190 Sum_probs=137.8
Q ss_pred HHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHH
Q 013568 140 MVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWS 217 (440)
Q Consensus 140 ~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~ 217 (440)
+.++..++. ......+|. +.+++|++..+.+++.+++.+++++ .+++|+++|| +| ||+.++++.++.+++.+
T Consensus 174 l~~~~~g~d~~~is~ilp~-i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR---~G--RR~~lii~lil~~i~~l 247 (742)
T TIGR01299 174 LALMADGVEVFVVGFVLPS-AEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK---LG--RKQCLLICLSVNGFFAF 247 (742)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--cHHHHHHHHHHHHHHHH
Confidence 333444444 234444444 4455899999999999999999988 7889999999 46 77778888777777777
Q ss_pred HHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc------
Q 013568 218 LMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA------ 291 (440)
Q Consensus 218 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~------ 291 (440)
+.+ ++++++.++++|++.|++.+...+...+++.|++|++.|++..++...++. +|.++++.++..+...
T Consensus 248 l~a-fa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~---iG~ila~~la~~il~~~G~~~~ 323 (742)
T TIGR01299 248 FSS-FVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWM---IGGIYAAAMAWAIIPHYGWSFQ 323 (742)
T ss_pred HHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhccchhc
Confidence 666 678889999999999999999999999999999999999999888887777 8999998887766543
Q ss_pred -------cchHHHHHHHHHHHHHHHHhheeecccccc
Q 013568 292 -------YGVRFVFGVTALLPLITSGVAVLVKEQQVL 321 (440)
Q Consensus 292 -------~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~ 321 (440)
.+||+.|++.++..++.++..+++||+|+.
T Consensus 324 ~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrw 360 (742)
T TIGR01299 324 MGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRF 360 (742)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 368999998888777776677789998754
No 60
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.86 E-value=2.2e-20 Score=186.50 Aligned_cols=273 Identities=12% Similarity=0.011 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHH
Q 013568 136 FAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGA 213 (440)
Q Consensus 136 ~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~ 213 (440)
+.+.+.+...... ...... .+++++ +|++.++.+++.+++.+++.+ +++.|+++|| +| ||+.+..+.++..
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~-~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr---~g--~~~~~~~~~~~~~ 102 (438)
T TIGR00712 30 LGIFFGYAAYYLVRKNFALA-MPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR---SN--PRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHhccHHhh-hHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc---cC--CceehHHHHHHHH
Confidence 3344444444443 233333 446666 599999999999999999888 7889999999 45 6667777777777
Q ss_pred HHHHHHHhh---hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 214 LSWSLMATI---VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 214 ~~~~~~~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
++.++++.. .++...+.+.|++.|++.+...+.....+.|++|+++|+++.++++.... +|..+++.+.+.+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~---~g~~~~~~l~~~~~~ 179 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHN---IGGGIPPLLVLLGMA 179 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHH---hHhHHHHHHHHHHHH
Confidence 776655522 24556677889999999998888888999999999999999999887777 899988887776444
Q ss_pred -ccchHHHHHHHHHHHHHHHH-hheeeccccccCCCcC----CCCCCCCCccchhhHHHHHHH--HHHhcCcchhhhHHH
Q 013568 291 -AYGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRR----QNLPLGDPSFFESSKQNMFQL--WEAVKQPNVFLPTLF 362 (440)
Q Consensus 291 -~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~l~ 362 (440)
..|||+.|++.+++.++..+ ..+++||++.....++ +.+..++....++.+...++. ...++++.+|...+.
T Consensus 180 ~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (438)
T TIGR00712 180 WFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIA 259 (438)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHH
Confidence 56899999998888776554 4556777654211000 000000000000000011111 235788888877655
Q ss_pred HHhhhccc-cccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 013568 363 VFLWQATP-HSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPL 418 (440)
Q Consensus 363 ~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~ 418 (440)
.++..... ......+.+..+..|+++.+.++...+..++.+++.++++++.||+++
T Consensus 260 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 316 (438)
T TIGR00712 260 NVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFK 316 (438)
T ss_pred HHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44433211 111222233335679999999999999999999999999999999854
No 61
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=4.2e-22 Score=188.57 Aligned_cols=267 Identities=15% Similarity=0.103 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
...+++..+++... +.+.. .-+-.++++|+++...|++.+.+.+.+.+ .|+.|+++|| |+||.++.++..+.
T Consensus 35 l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr-----yNR~~v~~vG~~iW 108 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR-----YNRKRVIAVGIFIW 108 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh-----cCcceEEeeHHHHH
Confidence 44555666666666 44443 33446677999999999999999999988 9999999999 47999999999999
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc
Q 013568 213 ALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY 292 (440)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~ 292 (440)
.++.++.+ +...+++++++|.+.|+|.+...++.+.+++|.++.++|++..++++++.. +|..+|-++++.+.+..
T Consensus 109 ~~Av~~~~-fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ip---vGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 109 TLAVFASG-FSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIP---VGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcc---cccceeEEeeeeeccCc
Confidence 99988888 679999999999999999999999999999999999999998888887776 99999998888888776
Q ss_pred c-hHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc
Q 013568 293 G-VRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP 370 (440)
Q Consensus 293 g-w~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~ 370 (440)
+ |||.|+..+++.++..+ +.++++|+++....+.+.+.. ........+++++.+.+++.+....+-...+++..
T Consensus 185 ~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~----~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~ 260 (493)
T KOG1330|consen 185 FWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK----MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVI 260 (493)
T ss_pred cceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCc----CCCCccchHHHHHHHHccCceeeehHHHHHHHHhc
Confidence 6 99999999999988777 455777776532222111100 01233456778888888776555444444444422
Q ss_pred ccccee----eeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 013568 371 HSDSAM----FYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKN 415 (440)
Q Consensus 371 ~~~~~~----~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r 415 (440)
++...+ .++..+-.|++.....++..+..+++.+|.+++|.+.||
T Consensus 261 Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~ 309 (493)
T KOG1330|consen 261 GSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDK 309 (493)
T ss_pred cccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHH
Confidence 111111 121123345555555555566666777777777777776
No 62
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.86 E-value=4.2e-21 Score=198.37 Aligned_cols=283 Identities=12% Similarity=0.046 Sum_probs=198.5
Q ss_pred HHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHH
Q 013568 139 AMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSW 216 (440)
Q Consensus 139 ~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~ 216 (440)
++.++.+.+. +.....++. ++++|+++..+.|++.+.+.+++++ .++.|++.|| . +||+++.++.++++++.
T Consensus 39 ~~~~~~~~~~~g~~~~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r---~--~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 39 TCAQLQGLLYNGLVNSSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK---L--HRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHHHhhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc---c--CcceEEEecHHHHHHHH
Confidence 3344555554 455555554 4555999999999999999999988 7889999999 3 48888888888888888
Q ss_pred HHHHhhhc---------------------------------------------------hhHHHHHHHHHHHHHHHhhhh
Q 013568 217 SLMATIVE---------------------------------------------------SKYSAALSILLGSLSVAFSDV 245 (440)
Q Consensus 217 ~~~~~~~~---------------------------------------------------~~~~~~~~~~l~g~~~~~~~~ 245 (440)
++.+ +++ .+..++++|++.|+|.+...+
T Consensus 113 ll~a-lphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~ 191 (633)
T TIGR00805 113 FLLS-LPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP 191 (633)
T ss_pred HHHh-ChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh
Confidence 7776 331 134567899999999999999
Q ss_pred hhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc----------------------chHHHHHHHHH
Q 013568 246 VVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY----------------------GVRFVFGVTAL 303 (440)
Q Consensus 246 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~----------------------gw~~~f~i~~~ 303 (440)
...+++.|++|+++|+.+.+++..+.. +|.++|+++++++.+.+ +|+..|++.++
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~---iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~ 268 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAV---FGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGG 268 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHH---hhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 999999999999999999999888777 99999999999887532 27778988888
Q ss_pred HHHHHHHhheeeccccccCCC-cC-CCC--CC----CC---CccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc-c
Q 013568 304 LPLITSGVAVLVKEQQVLGPS-RR-QNL--PL----GD---PSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP-H 371 (440)
Q Consensus 304 ~~~~~~~~~~~~~e~~~~~~~-~~-~~~--~~----~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~-~ 371 (440)
+.++..+.++++|++.+.... .+ +.. +. .. ....+..++..+..+++++||.++...+..++..... .
T Consensus 269 l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~ 348 (633)
T TIGR00805 269 VALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNG 348 (633)
T ss_pred HHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 877766655566654321111 00 000 00 00 0000112233455778899998887766555543321 1
Q ss_pred ccceeeeeeeccCCCChhhHHHHHHHHHH-HHHHHHHHHHHhhccCC--chhHHHHHHHHHHH
Q 013568 372 SDSAMFYFTTNELGFTPEFLGRVKFVTSV-ASLLGVGLYNGFLKNVP--LRKIFLANTIFGTA 431 (440)
Q Consensus 372 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~i-~~~~g~~~~~~l~~r~g--~r~~l~~~~~~~~~ 431 (440)
.....+.|+.+.+|+++.+++++.....+ +.++|.+++|++.||++ .|+++..+.++..+
T Consensus 349 ~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~ 411 (633)
T TIGR00805 349 YITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTL 411 (633)
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHH
Confidence 22223344456799999999999887666 67899999999999988 44555555444443
No 63
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.86 E-value=5.1e-20 Score=181.98 Aligned_cols=272 Identities=18% Similarity=0.230 Sum_probs=186.0
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhh-----hHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhh
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAE-----TAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLV 206 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~-----~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~ 206 (440)
.+..+++..++.++. +.....+|.+.++ +|++..+ .|++.++..++..+ +|++|+++|| +| ||+.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr---~g--~r~~~~ 88 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR---KG--RKIMLL 88 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hC--cHHHHH
Confidence 344555666666666 5677778888876 7998654 47888888888877 8999999999 45 677777
Q ss_pred HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 207 LSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
.+.++..++.+++. ..++.+.+++.|++.|++.+. .+....++.|..++++|+++.++...... +|.+++|.+++
T Consensus 89 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~ 163 (408)
T PRK09874 89 RSALGMGIVMVLMG-LAQNIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGV---SGALLGPLAGG 163 (408)
T ss_pred HHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHH---HHHHHHHHHHH
Confidence 77777777766666 567888889999999988654 46677888999999999999888877766 99999999999
Q ss_pred HhhhccchHHHHHHHHHHHHHHHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHH-HHH
Q 013568 287 SMVDAYGVRFVFGVTALLPLITSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTL-FVF 364 (440)
Q Consensus 287 ~l~~~~gw~~~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l-~~~ 364 (440)
.+.+.+||++.|++.+++.++..+. .++++|++.+.+++ .+...++..+.+++|+.+...+ ..+
T Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (408)
T PRK09874 164 LLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK--------------EMLHMREVVTSLKNPKLVLSLFVTTL 229 (408)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccch--------------hhhHHHHHHHhCcCCchHHHHHHHHH
Confidence 9999899999999988877666553 44556543221110 0112234456677777654332 222
Q ss_pred hhhccccc-cceeeeeeeccCCCChh----hHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 365 LWQATPHS-DSAMFYFTTNELGFTPE----FLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 365 ~~~~~~~~-~~~~~~~~~~~~g~s~~----~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
.+...... ...+..+..+..+ +.. ..+.+..+.+++.+++.+..+++.||+++|+.+..+.++..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 300 (408)
T PRK09874 230 IIQVATGSIAPILTLYVRELAG-NVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVL 300 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHH
Confidence 22221111 1111222222222 222 235555667788888899999999999999988877655443
No 64
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.86 E-value=1.1e-20 Score=190.06 Aligned_cols=281 Identities=15% Similarity=0.066 Sum_probs=182.2
Q ss_pred HHHHHh-hhHHHHHHHHHHHhcCCC--------hhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 143 FVQGVL-GLARLAVNFYLKDDLHLD--------PAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 143 ~~~~~~-~~~~~~l~~~l~~~~g~s--------~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
+..++. ......++....+ ++.+ ..+.+++.+++.++..+ ++++|+++|| +| ||++++++.++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~---~g--rr~~~~~~~~~~ 111 (481)
T TIGR00879 38 LMFGYDTGVIGGALALPAFE-FKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDR---FG--RKKSLLIIALLF 111 (481)
T ss_pred HhcccccchhhhhhhcHHHH-HhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhh---hh--hHHHHHHHHHHH
Confidence 344444 3444444444333 5665 88999999999999988 8899999999 45 777888887777
Q ss_pred HHHHHHHHhhh--chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH---HH
Q 013568 213 ALSWSLMATIV--ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS---GS 287 (440)
Q Consensus 213 ~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~---g~ 287 (440)
.++.++..... .+.+.+++.|++.|++.+...+...+++.|++++++|+++.++.+.+.. +|.++++.++ +.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~---~G~~~~~~~~~~~~~ 188 (481)
T TIGR00879 112 VIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAIT---FGILVAYGFGSGKVS 188 (481)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHH---HHHHHHHHHHHHhhc
Confidence 77766664222 2344788999999999999999999999999999999999999887777 9999999998 66
Q ss_pred hhhccchHHHHHHHHHHHHHHHHhheeeccccccC---CCcCCCC------CCCCCccchhhH-----------------
Q 013568 288 MVDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLG---PSRRQNL------PLGDPSFFESSK----------------- 341 (440)
Q Consensus 288 l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~---~~~~~~~------~~~~~~~~~~~~----------------- 341 (440)
+.+..|||+.|++.++..++..+..+++||++... +..++.. ...+....+..+
T Consensus 189 ~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (481)
T TIGR00879 189 LNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQ 268 (481)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhcc
Confidence 66778999999997776666666667778765311 0000000 000000000000
Q ss_pred HHHHHHHHHhcC--cc-hhhhHHHHHhhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 013568 342 QNMFQLWEAVKQ--PN-VFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPL 418 (440)
Q Consensus 342 ~~~~~~~~~l~~--~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~ 418 (440)
..+++.++..++ +. ++..++..+...........+..+..++.|++....+....+..++.+++.++.+++.||+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 348 (481)
T TIGR00879 269 PSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGR 348 (481)
T ss_pred ccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 000112221121 11 111122222221111111111111225679988888888889999999999999999999999
Q ss_pred hhHHHHHHHHHHHH
Q 013568 419 RKIFLANTIFGTAL 432 (440)
Q Consensus 419 r~~l~~~~~~~~~~ 432 (440)
|+.+..+.++.++.
T Consensus 349 ~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 349 RPLLLIGAAGMAIC 362 (481)
T ss_pred hHHHHHHHHHHHHH
Confidence 99888765554443
No 65
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.86 E-value=1.1e-20 Score=190.95 Aligned_cols=287 Identities=14% Similarity=0.107 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHhc--------CCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhh
Q 013568 137 AVAMVYFVQGVL-GLARLAVNFYLKDDL--------HLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLV 206 (440)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~l~~~l~~~~--------g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~ 206 (440)
...++.+..++. ..+....+. +++++ |.+..+.+++.+++.++..+ ++++|+++|| +| ||+.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr---~G--rr~~~~ 89 (479)
T PRK10077 16 VATLGGLLFGYDTAVISGTVES-LNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNR---FG--RRDSLK 89 (479)
T ss_pred HHHHHHHhcCcccceehHhHHH-HHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--cHHHHH
Confidence 344445555555 344444443 33334 88999999999999999988 7899999999 45 777888
Q ss_pred HHHHHHHHHHHHHHhh-----------hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhh
Q 013568 207 LSGLLGALSWSLMATI-----------VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSA 275 (440)
Q Consensus 207 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 275 (440)
++.++..++.+..+.. ......++++|+++|++.+...+...++++|++|+++|++++++.+.+..
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~--- 166 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII--- 166 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH---
Confidence 8877777776655521 12245678999999999999999999999999999999999999887777
Q ss_pred hHHHHHHHHHHHhh--------hccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCC----CCCCccchhhHHH
Q 013568 276 FGGIVSSYFSGSMV--------DAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLP----LGDPSFFESSKQN 343 (440)
Q Consensus 276 ~g~~ig~~i~g~l~--------~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~----~~~~~~~~~~~~~ 343 (440)
+|.++++.+++.+. +.+|||+.|++.+++.++..+..+++||+++....+.+.++ .++....+..+..
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 88888887766543 35799999999888777766667788887643111100000 0000000000111
Q ss_pred HHHHHHHhc-----Ccchhhh----HHHH---Hhhhccccccceeeeee---eccCCCChhhHHHHHHHHHHHHHHHHHH
Q 013568 344 MFQLWEAVK-----QPNVFLP----TLFV---FLWQATPHSDSAMFYFT---TNELGFTPEFLGRVKFVTSVASLLGVGL 408 (440)
Q Consensus 344 ~~~~~~~l~-----~~~~~~~----~l~~---~~~~~~~~~~~~~~~~~---~~~~g~s~~~~g~~~~~~~i~~~~g~~~ 408 (440)
.++.++.++ .+..+.. +... ..+.... ......++. .+..|++....++.....+++.+++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 325 (479)
T PRK10077 247 LQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFV-GINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVL 325 (479)
T ss_pred HHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHh-ChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 111212111 1111111 0100 0111100 111111111 1457888777777777888889999999
Q ss_pred HHHhhccCCchhHHHHHHHHHHHHh
Q 013568 409 YNGFLKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 409 ~~~l~~r~g~r~~l~~~~~~~~~~~ 433 (440)
.+++.||+|+|++++.+.++.++..
T Consensus 326 ~g~l~dr~g~r~~~i~~~~~~~v~~ 350 (479)
T PRK10077 326 AIMTVDKFGRKPLQIIGALGMAIGM 350 (479)
T ss_pred HHHHHHHhcChHHHHHhHHHHHHHH
Confidence 9999999999999888776655543
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.86 E-value=1.4e-19 Score=178.45 Aligned_cols=264 Identities=15% Similarity=0.131 Sum_probs=184.5
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
+....++.... ....+.++.++++++|+|..++|++.++..++..+ +++.|+++|| +| ||+.++.+.++..++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr---~g--~k~~l~~~~~~~~~~ 89 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR---FG--AKPMIVTGMLMRAAG 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH---hC--chHHHHHHHHHHHHH
Confidence 44444454554 56677788888888999999999999998888776 8899999999 45 788888888888888
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchH
Q 013568 216 WSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVR 295 (440)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~ 295 (440)
.+.+. ..++.+.+++.+++.|++.+...+...+++.|.+|+++|+++.++...... +|..+||.+++++. .+||+
T Consensus 90 ~~~~~-~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~---~g~~ig~~l~g~l~-~~g~~ 164 (400)
T PRK11646 90 FATMA-IAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDS---AGAVIGALLGSWLL-QYDFR 164 (400)
T ss_pred HHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH-HhhHH
Confidence 77776 677888889999999999998888899999999999999999999887777 99999999999998 68999
Q ss_pred HHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc-cc
Q 013568 296 FVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH-SD 373 (440)
Q Consensus 296 ~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~ 373 (440)
+.|++.++..++..+ ..++.||.+.. +.+ ++..++.++.+++|.++...+..+.+..... ..
T Consensus 165 ~~f~~~~~~~~~~~i~~~~~~~~~~~~---~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (400)
T PRK11646 165 LVCATGAVLFVLAAAFNAWLLPAYKLS---TVR-------------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVM 228 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccc---ccc-------------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 999998877665544 33445543211 000 0111234566788887654433332222110 11
Q ss_pred ceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhh-ccCCchhHHHHHHHH
Q 013568 374 SAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFL-KNVPLRKIFLANTIF 428 (440)
Q Consensus 374 ~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~-~r~g~r~~l~~~~~~ 428 (440)
...+++. ++.+.++.+.+.+....+++.+.+....+++. ||++.++.+..+.++
T Consensus 229 ~~~p~~~-~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 283 (400)
T PRK11646 229 LMLPIMV-NDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLI 283 (400)
T ss_pred HhhhhhH-HhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Confidence 1122333 34444777888888777776665555555555 456655555444433
No 67
>PRK15075 citrate-proton symporter; Provisional
Probab=99.85 E-value=5.6e-20 Score=183.32 Aligned_cols=272 Identities=15% Similarity=0.113 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHH-HHhh--hhhH---HH-HhhhhhhccccCcCCCCcchhhh
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVI-SGFS--SLPW---LI-KPLYGFISDSLPLFGYRRRSYLV 206 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~-~s~~--~l~~---~~-~~~~g~l~Dr~~~~G~~rr~~l~ 206 (440)
...+++..+...++ .......| .++++++.+..+.+.+ .+.. ...+ .+ +++.|+++|| +| ||+.++
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr---~G--rr~~l~ 90 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYAT-AIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR---VG--RRKGLI 90 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh---hc--hHHHHH
Confidence 44566777888887 45555555 4555589988776543 2222 2222 23 5677999999 45 777888
Q ss_pred HHHHHHHHHHHHHHhhhchhH--------HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHH
Q 013568 207 LSGLLGALSWSLMATIVESKY--------SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGG 278 (440)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~ 278 (440)
.+.++..++.++++ +.++.. .++++|++.|++.+...+....++.|++|+++|++..++...... +|.
T Consensus 91 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~---~g~ 166 (434)
T PRK15075 91 VTLSIMASGTLLIA-FVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQ---VAV 166 (434)
T ss_pred HHHHHHHHHHHHHH-hCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHH---HHH
Confidence 88888888877777 666655 368899999999999888888999999999999999998876666 666
Q ss_pred HHHHHHHHHh--------hhccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHH
Q 013568 279 IVSSYFSGSM--------VDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEA 350 (440)
Q Consensus 279 ~ig~~i~g~l--------~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (440)
.+++.+++.+ .+.+|||++|++..+...+........||++.....+++ . +.++. ....
T Consensus 167 ~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~------~----~~~~~---~~~~ 233 (434)
T PRK15075 167 VFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR------P----SMREI---FRSL 233 (434)
T ss_pred HHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc------c----ccccH---HHHH
Confidence 6666666654 246899999997654332222222233333210000000 0 00111 1122
Q ss_pred hcCcchhhhHHH-HHhhhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHH
Q 013568 351 VKQPNVFLPTLF-VFLWQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIF 428 (440)
Q Consensus 351 l~~~~~~~~~l~-~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~ 428 (440)
.++++.+..... .++...... .....+.++.+.+|++..+.++......++.+++.++.|++.||+|+|+.++.+.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~ 313 (434)
T PRK15075 234 AANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVL 313 (434)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 334443332211 111111000 111123333355899998888888888999999999999999999999988775544
Q ss_pred H
Q 013568 429 G 429 (440)
Q Consensus 429 ~ 429 (440)
.
T Consensus 314 ~ 314 (434)
T PRK15075 314 A 314 (434)
T ss_pred H
Confidence 3
No 68
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.4e-20 Score=186.41 Aligned_cols=286 Identities=17% Similarity=0.142 Sum_probs=204.8
Q ss_pred HHHHHHHHHHh-h-hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHH
Q 013568 138 VAMVYFVQGVL-G-LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGAL 214 (440)
Q Consensus 138 ~~~~~~~~~~~-~-~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~ 214 (440)
+++.|+..... . +....+.. ++++.++...+.+.+.+++.++|++ ++++|.+.||++ -...+....+...+
T Consensus 50 ~~~~y~~~~~d~~si~~a~l~g-~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~-----ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 50 LCYLYFHAYLDKSSIVNASLSG-LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP-----LSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHhcchhcchhHHHcC-CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC-----hHHHHHHHHHHHHH
Confidence 34444444443 2 33333322 4566899999999999999999999 889999999962 23334444334333
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh-----
Q 013568 215 SWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV----- 289 (440)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~----- 289 (440)
..++.+ ..++++.+++.|++.|+..+...|....++..++.+++|+.+++++..... +|.++|++++..+.
T Consensus 124 ~~~~~~-~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~---~g~i~ggliA~g~~~~~~~ 199 (495)
T KOG2533|consen 124 FGFLTA-AVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASAS---LGNIFGGLIAYGVFKLNGS 199 (495)
T ss_pred HHHHHH-HHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcc---hhhHHHHHHHHHhhhhcCC
Confidence 333333 468899999999999999999999999999999999999999999988877 99999999998863
Q ss_pred -hccchHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCC------CCC-CCccchhhHHHHHHHHHHhcCcchhhhH
Q 013568 290 -DAYGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNL------PLG-DPSFFESSKQNMFQLWEAVKQPNVFLPT 360 (440)
Q Consensus 290 -~~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 360 (440)
...||||.|++.+++.++..+ +.+++|+.|.+..-..+.+ +.+ ........+...+++++.+++|.+|.++
T Consensus 200 ~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~ 279 (495)
T KOG2533|consen 200 GGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFS 279 (495)
T ss_pred CCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHH
Confidence 356899999999998888776 5668898876321111100 000 0001011114567888999999999998
Q ss_pred HHHHhhhcccccccee-eeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhcc----CCchhHHHHHHHHHHHHh
Q 013568 361 LFVFLWQATPHSDSAM-FYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKN----VPLRKIFLANTIFGTALG 433 (440)
Q Consensus 361 l~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r----~g~r~~l~~~~~~~~~~~ 433 (440)
+..++......+...+ +++..+..|++..+++.+..+..++.+++.+++++++|| ..+|........+..+.+
T Consensus 280 l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g 357 (495)
T KOG2533|consen 280 LCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIG 357 (495)
T ss_pred HHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 8777765533222222 333334467999999999999999999999999999999 556666666555555555
No 69
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=5e-20 Score=173.26 Aligned_cols=278 Identities=18% Similarity=0.188 Sum_probs=203.2
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
++.+.+...++..++. ......+.+.+++++|+|+.|.+++.++..+..++ ..+.|.+.|| +| .|| +..++.+
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr---fG-gR~-~~~~s~~ 87 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR---FG-GRK-WTILSML 87 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc---cC-chH-HHHHHHH
Confidence 3555666667766666 56666777788888999999999999888877666 8999999999 56 455 4455555
Q ss_pred HHHHHHHHHHhhh---chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 211 LGALSWSLMATIV---ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 211 ~~~~~~~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
+.++-.+.++ ++ ++.+.+++++++.|++.+.. ......++.++|+|++|.+++++. .+|+|..+..+++..
T Consensus 88 l~~IP~~~~~-~a~~~~~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~qG~AlGI~g----~GN~G~av~q~~~P~ 161 (417)
T COG2223 88 LLLIPCLGLA-FAVTYPSTWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEKQGLALGIAG----AGNLGVAVAQLVAPL 161 (417)
T ss_pred HHHHHHHHHH-HHccCCchHHHHHHHHHHhccccee-hcccccccccCChhhhhHHHHHhc----cccccHHHHHHHHHH
Confidence 6566555555 33 33458889999999887654 477789999999999999999986 345888888888888
Q ss_pred hhhccc---hHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHH
Q 013568 288 MVDAYG---VRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFV 363 (440)
Q Consensus 288 l~~~~g---w~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 363 (440)
++...| |+.+..+..+..++..+ .++...+.+..++..++ ... .+++.+.+++.+|.+.++.
T Consensus 162 v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~------------~~~--~~~~~v~~~~~~W~lsllY 227 (417)
T COG2223 162 VAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKP------------QLP--AQLKAVFSNKDTWLLSLLY 227 (417)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccc------------cch--hHHHHHhcCcchHHHHHHH
Confidence 888888 99998888877777655 45555555443221111 011 4566677899999887544
Q ss_pred Hh-hhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhh
Q 013568 364 FL-WQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 364 ~~-~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~ 435 (440)
+. +.........+..++.+++|.++.++|.+.....+...+.+.++|+++||+|.+|.+....++++++..+
T Consensus 228 ~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~ 300 (417)
T COG2223 228 FATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAAL 300 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHH
Confidence 44 4442222333344555789999999999888888888899999999999999998888877776665543
No 70
>PRK09669 putative symporter YagG; Provisional
Probab=99.84 E-value=4e-19 Score=177.73 Aligned_cols=276 Identities=16% Similarity=0.111 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchhhhHHHHHH
Q 013568 136 FAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 136 ~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~l~~~~~~~ 212 (440)
+...++-+..+.. .....+++.|+.|++|++...+|.+.++..+..++ +|+.|+++||. .++| |||++++.+.+..
T Consensus 12 ~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~G-rrrp~il~~~~~~ 90 (444)
T PRK09669 12 IGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHG-QFRPYLLWFAIPF 90 (444)
T ss_pred HhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCC-CcchhHHHHHHHH
Confidence 3344444444443 45567888999999999999999999999988888 99999999998 5788 8899999887777
Q ss_pred HHHHHHHHhhhch------hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhc-ccccccchhhhHHhhhhhhhHHHHHHHHH
Q 013568 213 ALSWSLMATIVES------KYSAALSILLGSLSVAFSDVVVDSMVVERAR-GESQSVSGSLQSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 213 ~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~~~~g~~ig~~i~ 285 (440)
+++.+++. ..++ .....+..++.+.+.+....+..++.+|+.+ +++|.+..+....... +|..+++.+.
T Consensus 91 ~i~~~l~f-~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~---~G~~i~~~~~ 166 (444)
T PRK09669 91 GVVCLLTF-YTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSF---IGGLIVSVIA 166 (444)
T ss_pred HHHHHHHH-hCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 77765544 3322 2334445566677777888889999999984 4677766555554444 6766666555
Q ss_pred HHhhh-------ccchHHHHHHHHHHHHHHHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchh
Q 013568 286 GSMVD-------AYGVRFVFGVTALLPLITSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVF 357 (440)
Q Consensus 286 g~l~~-------~~gw~~~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 357 (440)
..+.. ..||+..+.+.+++.++..+. ++..+|+..+++ ++ .....++++.+++||.++
T Consensus 167 ~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~--~~------------~~~~~~~~~~~~~n~~~~ 232 (444)
T PRK09669 167 LPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEV--DN------------SSSVWKDLKLLLGNSQWR 232 (444)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCC--cC------------CCCHHHHHHHHhCCchHH
Confidence 44332 347888888888777665553 445555432211 00 012334566778999877
Q ss_pred hhHHHHHhhhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 358 LPTLFVFLWQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 358 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
..++..+++..... ......|+.....+ ++...+.+.....++.+++.++.+++.||+|+|+.+.++.++.++
T Consensus 233 ~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 233 IMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVI 306 (444)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 76654444322111 12222344333444 333445555666778888999999999999999988876654443
No 71
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.83 E-value=3.5e-19 Score=180.88 Aligned_cols=176 Identities=13% Similarity=0.110 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHh----cCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 137 AVAMVYFVQGVL-GLARLAVNFYLKDD----LHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~l~~~l~~~----~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
.+.+..+..++. .......+.+-.+. .+.+..+.+++.+...+++.+ ++++|+++|| +| ||+.+.++.+
T Consensus 20 ~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~---~G--rr~~~~~~~~ 94 (502)
T TIGR00887 20 IAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADK---LG--RKRVYGMELI 94 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hc--cHHHHHHHHH
Confidence 345555666666 34444444332221 235566778899999999888 7889999999 45 8888888877
Q ss_pred HHHHHHHHHHhhhch------hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 211 LGALSWSLMATIVES------KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 211 ~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
+..++.++.+ +..+ ...++++|++.|++.+...+....++.|++|+++|+++.++...... +|.++++.+
T Consensus 95 ~~~v~~~~~~-~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~---~g~~~g~~~ 170 (502)
T TIGR00887 95 IMIIATVASG-LSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQG---FGILAGAIV 170 (502)
T ss_pred HHHHHHHHHH-HccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHH---HHHHHHHHH
Confidence 7777776666 4433 56889999999999999999999999999999999999999888877 888888888
Q ss_pred HHHhhh-----------------------ccchHHHHHHHHHHHHHHHHhheeecccccc
Q 013568 285 SGSMVD-----------------------AYGVRFVFGVTALLPLITSGVAVLVKEQQVL 321 (440)
Q Consensus 285 ~g~l~~-----------------------~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~ 321 (440)
+.++.. .++||+.|.+.++..++.++..+++||+|+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~ 230 (502)
T TIGR00887 171 ALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRY 230 (502)
T ss_pred HHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 765532 2479999988888777777777889998764
No 72
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.83 E-value=1.1e-18 Score=174.78 Aligned_cols=254 Identities=12% Similarity=0.058 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHH
Q 013568 151 ARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSA 229 (440)
Q Consensus 151 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 229 (440)
....++.+. +++|++..+.+++.+.+.+...+ +|++|+++|| +| ||+.++.+.++..++.++++ ..++.+.+
T Consensus 38 ~~~~~~~i~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr---~g--~r~~l~~~~~~~~~~~~~~~-~~~~~~~l 110 (455)
T TIGR00892 38 VTVFFKELQ-QIFQATYSETAWISSIMLAVLYAGGPISSILVNR---FG--CRPVVIAGGLLASLGMILAS-FSSNVIEL 110 (455)
T ss_pred hhhhHHHHH-HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH---cC--chHHHHhhHHHHHHHHHHHH-HhhhHHHH
Confidence 344455544 55899999999999988877766 8899999999 45 67788888777777777766 56777766
Q ss_pred HH-HHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHH
Q 013568 230 AL-SILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLIT 308 (440)
Q Consensus 230 ~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~ 308 (440)
++ .|++.|++.+...+...+++.++++ ++|+++.++.+.+.. +|..++|.+++++.+.+|||+.|++.+++.++.
T Consensus 111 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~---~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~ 186 (455)
T TIGR00892 111 YLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSP---VFLSTLAPLNQYLFESFGWRGSFLILGGLLLHC 186 (455)
T ss_pred HHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhccc---HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 54 5688899988765667778889886 688999988887777 999999999999999999999999999877665
Q ss_pred HHhheeecccccc----CCC-cCCCCCCCC-Cc-cchhhHHHHHHH--HHHhcCcchhhhHHHHHhhhcccccccee-ee
Q 013568 309 SGVAVLVKEQQVL----GPS-RRQNLPLGD-PS-FFESSKQNMFQL--WEAVKQPNVFLPTLFVFLWQATPHSDSAM-FY 378 (440)
Q Consensus 309 ~~~~~~~~e~~~~----~~~-~~~~~~~~~-~~-~~~~~~~~~~~~--~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~ 378 (440)
.+..+++.+.+.. +++ ++....... +. ..+...+..++. .+.+++|.++..++..++..........+ ..
T Consensus 187 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 266 (455)
T TIGR00892 187 CVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVP 266 (455)
T ss_pred HHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHH
Confidence 5543333221111 000 000000000 00 000001111111 35678888776665444433321111111 12
Q ss_pred eeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 013568 379 FTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNV 416 (440)
Q Consensus 379 ~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~ 416 (440)
+. ++.|+++.+++.+..+.+++.+++.++.+++.||.
T Consensus 267 ~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 267 YA-KDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 22 45799999999999999999999999999999873
No 73
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.83 E-value=2.4e-19 Score=172.71 Aligned_cols=251 Identities=22% Similarity=0.289 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHH
Q 013568 137 AVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGAL 214 (440)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~ 214 (440)
.+.+.++...+. .......+.+.++ +|.+..+.+++.+...++..+ +|++|+++|| +| ||+.+..+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~---~g--~r~~~~~~~~~~~~ 76 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDR---FG--RRRVLLLGLLLFAL 76 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH---hC--CchhhHHHHHHHHH
Confidence 345556666665 5666677777766 799999999999999999887 8999999999 45 67788888888888
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccch
Q 013568 215 SWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGV 294 (440)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw 294 (440)
+.+.+. ..++.+.+++.+++.|++.+...+...+++.|++|+++|++..++...... +|..+++.+++.+.+..+|
T Consensus 77 ~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~ 152 (352)
T cd06174 77 GSLLLA-FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFG---LGALLGPLLGGLLAESLGW 152 (352)
T ss_pred HHHHHH-HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHH---HHHHHHHHHHHHHHHHhhH
Confidence 877777 668888999999999999999999999999999999999999999887777 9999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc-cc
Q 013568 295 RFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH-SD 373 (440)
Q Consensus 295 ~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~ 373 (440)
++.|++.+++.++..+..++++ |.++...+..++...... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~ 195 (352)
T cd06174 153 RWLFLILAILGLLLALLLLFLL-------------------------------------RLLLLLALAFFLLSFGYYGLL 195 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHHHHHHHHhHHHHHH
Confidence 9999998888777666554443 223333333333222111 11
Q ss_pred ceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchh-HHHHHHHHHHHHhh
Q 013568 374 SAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRK-IFLANTIFGTALGM 434 (440)
Q Consensus 374 ~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~-~l~~~~~~~~~~~~ 434 (440)
.....+..+.+|.+..+.+.......++.+++..+.+++.||+++|+ .+..+.++..+..+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 257 (352)
T cd06174 196 TYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL 257 (352)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 11222233445889999999999999999999999999999999998 77776665554443
No 74
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.83 E-value=7.2e-19 Score=177.16 Aligned_cols=281 Identities=13% Similarity=0.168 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchhhhHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~l~~~~~~ 211 (440)
.+...++.+..++. .....+++.|+.+.+|++...+|.+..+..+.-++ .|++|.++||. .++| |||++++.+.+.
T Consensus 8 ~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~G-rrrp~il~g~i~ 86 (473)
T PRK10429 8 KLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWG-KFKPWILIGTLA 86 (473)
T ss_pred HHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCC-CcchhHhhhhHH
Confidence 34455555555554 56777889999999999999999998888888777 89999999987 6789 889999999888
Q ss_pred HHHHHHHHHhhhch------hHHHHHHHHHHHHHHHhhhhhhhHHHHhhh-cccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 212 GALSWSLMATIVES------KYSAALSILLGSLSVAFSDVVVDSMVVERA-RGESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 212 ~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
.+++..++. ..++ ...+++..++.+++.+...++..++..|+. ++++|.+..+....+.. +|+.+++.+
T Consensus 87 ~~i~~~llf-~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~---ig~~~~~~~ 162 (473)
T PRK10429 87 NSVVLFLLF-SAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFAS---LAGFVTAGF 162 (473)
T ss_pred HHHHHHHHH-cCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 877765554 3221 223445556677888889999999999999 57788876666443333 665555544
Q ss_pred HHHhhh-------ccchHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcch
Q 013568 285 SGSMVD-------AYGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNV 356 (440)
Q Consensus 285 ~g~l~~-------~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 356 (440)
...+.+ ..||+....+.+++.++..+ .++..+|++...+.+.+++ ++ ...+ +..+.+++||.+
T Consensus 163 ~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~--~~----~~~~---~~~~~~~~n~~~ 233 (473)
T PRK10429 163 TLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEG--SH----LTLK---DIVALIYKNDQL 233 (473)
T ss_pred HHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccc--cC----CCHH---HHHHHHhcCHHH
Confidence 443322 23577777777766665544 3444666532211111000 00 0112 223345688877
Q ss_pred hhhHHHHHhhhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q 013568 357 FLPTLFVFLWQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGT 430 (440)
Q Consensus 357 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~ 430 (440)
+.+++..+++..... ......|+.....| ++...+.+.....++.+++.++.+++.||+|+|+.+.++.++.+
T Consensus 234 ~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~ 307 (473)
T PRK10429 234 SCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPV 307 (473)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 766655444333221 12222344333444 55666777777778889999999999999999999877665443
No 75
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.83 E-value=5.1e-19 Score=174.31 Aligned_cols=281 Identities=13% Similarity=0.118 Sum_probs=179.0
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
+.+|.+...+++.... +...+.++.|+++++|++..+.|++.++..+++.+ +|++|+++|| +| ||+.++.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr---~g--rr~~~~~~~~ 76 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK---LG--LKKHLLWIIS 76 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--cHHHHHHHHH
Confidence 3567777777777776 67888999999988999999999999999999988 8999999999 45 5666655444
Q ss_pred HHHHHHHHHHh--hhc-----hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHH
Q 013568 211 LGALSWSLMAT--IVE-----SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSY 283 (440)
Q Consensus 211 ~~~~~~~~~~~--~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~ 283 (440)
..+++...... ..+ .....++.+++.|++.+...+....+..|..++ ++...+..... +++|.++||.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~---~~~g~~~g~~ 151 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--SNFEYGKARMF---GCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--cccccchhhhh---cccHHHHHHH
Confidence 43333222110 111 122334556777777777777777776665432 22233333333 3499999999
Q ss_pred HHHHhhhccchHHHHHHHHHHHHHHHHhhee-eccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHH
Q 013568 284 FSGSMVDAYGVRFVFGVTALLPLITSGVAVL-VKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLF 362 (440)
Q Consensus 284 i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 362 (440)
++|.+.+ ++|++.|++.+++.++..+..++ .+|++++++ .++..+ .+ ..+...++..+.+|+|.++..+++
T Consensus 152 ~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~----~~~~~~~~~~~~l~~~~~~~~~l~ 223 (396)
T TIGR00882 152 IAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSAT-VANALG--AN----ASAFSLKLALELFRQRKFWMFVLY 223 (396)
T ss_pred HHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhh-hhcccc--cc----cCCCCHHHHHHHHcCCcHHHHHHH
Confidence 9998765 69999999988877776654443 333322111 110000 00 011122456778899988766555
Q ss_pred HHhhhcccc-ccceeeeeeec---cCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 363 VFLWQATPH-SDSAMFYFTTN---ELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 363 ~~~~~~~~~-~~~~~~~~~~~---~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
.+....... .......|..+ ..+.+....|.......+...++....+++.||+++|+.+.++.++.++
T Consensus 224 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l 296 (396)
T TIGR00882 224 VVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 444322111 11112222222 2355666778888888888888999999999999999988887765554
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.83 E-value=7.1e-19 Score=195.61 Aligned_cols=245 Identities=11% Similarity=0.072 Sum_probs=173.0
Q ss_pred hhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhH--HHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhh
Q 013568 168 AETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVL--SGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSD 244 (440)
Q Consensus 168 ~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 244 (440)
...++..+++.+++++ +|++|+++|| +| ||+++.. ...+.......+++..++++.++++|+++|++.++..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr---~~--rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~ 126 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADK---YD--KAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFG 126 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhh---cc--HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Confidence 4467788889999887 8999999999 45 6655422 1111222222223234788999999999999999999
Q ss_pred hhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhheeeccccccCCC
Q 013568 245 VVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPS 324 (440)
Q Consensus 245 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~ 324 (440)
++..+++.|+++++++++++++.+.+.. +|.++||.++|++.+..||++.|++.+++.++.+++.+++++++.....
T Consensus 127 p~~~a~l~~~~~~~~~~~a~~~~~~~~~---ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1140)
T PRK06814 127 PIKYSILPDHLNKDELLGANALVEAGTF---IAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAAPD 203 (1140)
T ss_pred hHHHHhhHhhcCccccchhhHHHHHHHH---HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence 9999999999999999999999998888 9999999999999999999999966555555555566677765432211
Q ss_pred cCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc-cccceeeeeeeccCCCChhhHHHHHHHHHHHHH
Q 013568 325 RRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP-HSDSAMFYFTTNELGFTPEFLGRVKFVTSVASL 403 (440)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~ 403 (440)
.+.. . ...++....++.+.++|.+|..++..++..+.. .....+..|..+.+|.++...|++.+..+++.+
T Consensus 204 ~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ 275 (1140)
T PRK06814 204 LKID-----R---NIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVA 275 (1140)
T ss_pred Ceec-----c---chHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 1100 0 011223334556678888777665444433211 122233444456789999999999999999999
Q ss_pred HHHHHHHHhhccCCchhHHHHHHHH
Q 013568 404 LGVGLYNGFLKNVPLRKIFLANTIF 428 (440)
Q Consensus 404 ~g~~~~~~l~~r~g~r~~l~~~~~~ 428 (440)
+|.++.+++.++..+++.+..+.++
T Consensus 276 ig~~~~g~l~~~~~~~~~~~~~~~~ 300 (1140)
T PRK06814 276 VGSFLASKLSEGRITLLYVPIGALL 300 (1140)
T ss_pred HHHHHHHHHhCCceeeeeehHHHHH
Confidence 9999999999877666554444333
No 77
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.83 E-value=3.5e-20 Score=186.55 Aligned_cols=246 Identities=11% Similarity=0.036 Sum_probs=178.2
Q ss_pred hcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHh-hhchhHHHHHHHHHHHHH
Q 013568 162 DLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMAT-IVESKYSAALSILLGSLS 239 (440)
Q Consensus 162 ~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~ 239 (440)
+++++..+.|++.+.+.+++.+ +++.|+++|| +| ||+.+..+.++..++.++... ...+...+++.|++.|++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr---~g--~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK---YV--FKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHH---hC--cchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHh
Confidence 5899999999999999999998 8899999999 45 677777777766666555431 234567788999999999
Q ss_pred HHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHHHHhhe-eecc
Q 013568 240 VAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY-GVRFVFGVTALLPLITSGVAV-LVKE 317 (440)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~-gw~~~f~i~~~~~~~~~~~~~-~~~e 317 (440)
.+...+....++.|++|+++|+++.++...+.. +|.++++.+++++.+.+ |||+.|++.+++.++..++++ +.+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQ---LGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999998887777 99999999999999884 999999999888776666444 4445
Q ss_pred ccccCCCcCCCCC------CCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc-ccceeeeeeeccCCCChhh
Q 013568 318 QQVLGPSRRQNLP------LGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH-SDSAMFYFTTNELGFTPEF 390 (440)
Q Consensus 318 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~ 390 (440)
+|..++...++++ ..++.. . .......++.++++.+|...+..+++..... .....+.++.+.+|++..+
T Consensus 222 ~p~~~~~~~~~~~~~i~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~ 298 (465)
T TIGR00894 222 DPSIHPCISKFEKKYINSSLQGQKG--S-TRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKE 298 (465)
T ss_pred CcccCCCCCHHHHHHHHhhcccccC--C-CCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH
Confidence 4432211110000 000000 0 0001124567788888877665555433211 1122233444678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 013568 391 LGRVKFVTSVASLLGVGLYNGFLKNVPL 418 (440)
Q Consensus 391 ~g~~~~~~~i~~~~g~~~~~~l~~r~g~ 418 (440)
.|+......++.+++.++.|++.||.++
T Consensus 299 ~g~~~~~~~~~~~i~~~~~g~l~d~~~~ 326 (465)
T TIGR00894 299 NGLLSSLPYLFAWLCSIFAGYLADFLKS 326 (465)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998653
No 78
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.83 E-value=4.2e-19 Score=172.26 Aligned_cols=250 Identities=12% Similarity=0.079 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHH
Q 013568 151 ARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSA 229 (440)
Q Consensus 151 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 229 (440)
....+|.+. +++|++.++.|++.+++.+++.+ +++.|+++|| +| ||+.+..+.++..++.+.. ..++.+.+
T Consensus 19 ~~~~lp~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr---~g--~r~~~~~~~~~~~~~~~~~--~~~~~~~l 90 (355)
T TIGR00896 19 VGPLLPQIR-SALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR---FG--EERSVAAGLLLIAAGILIR--SAPGTALL 90 (355)
T ss_pred CcccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH---hC--chHHHHHHHHHHHHHHHHH--HhccHHHH
Confidence 344555544 45899999999999999999988 8899999999 45 6777777776666555443 45677788
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHH
Q 013568 230 ALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY--GVRFVFGVTALLPLI 307 (440)
Q Consensus 230 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~--gw~~~f~i~~~~~~~ 307 (440)
++.|++.|++.+...+.....+.|.++ ++|+++.++.+.... +|..+++.+++.+.+.. +||+.|.+.+++.++
T Consensus 91 ~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 91 FAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALM---GGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHH---HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 899999999999888788888888886 578888888877766 99999999999887765 399999877665443
Q ss_pred HHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccccc-cceeeeeeeccCCC
Q 013568 308 TSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHS-DSAMFYFTTNELGF 386 (440)
Q Consensus 308 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~ 386 (440)
... .++++.+.+++.+++. . + ...++.+|+|.+|...+..++....... ......+. ++.|+
T Consensus 167 ~~~--~~~~~~~~~~~~~~~~----------~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~-~~~g~ 229 (355)
T TIGR00896 167 ALL--AWIPQVRRRVAANQTT----------T-R---LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAIL-ISHGA 229 (355)
T ss_pred HHH--HHhhhhccccCCCCCC----------C-C---CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCC
Confidence 322 2334433211111000 0 0 1123456777776654433332221111 11122222 35799
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhccCC-chhHHHHHHHHH
Q 013568 387 TPEFLGRVKFVTSVASLLGVGLYNGFLKNVP-LRKIFLANTIFG 429 (440)
Q Consensus 387 s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g-~r~~l~~~~~~~ 429 (440)
++.+.+.+.....++.+++.++.+++.||++ +|+.+..+.++.
T Consensus 230 ~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~ 273 (355)
T TIGR00896 230 SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQ 273 (355)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Confidence 9999999999999999999999999999995 555554444333
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.83 E-value=6.2e-19 Score=175.09 Aligned_cols=285 Identities=14% Similarity=0.142 Sum_probs=171.3
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++++|.+.+.+++..+. +...+.++.|+++++|++..++|++.++..+++.+ +|++|+++|| +| ||+.++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr---~g--~r~~~~~~~ 83 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK---LG--LKKHLLWII 83 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--chHHHHHHH
Confidence 34677777777777775 67788999999998999999999999999999988 8999999999 45 666665544
Q ss_pred HHHHHHHHHHHhhh-chh-H-HHHHHHHHHHHHHHhhhhhhhHHHHhhhc--ccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 210 LLGALSWSLMATIV-ESK-Y-SAALSILLGSLSVAFSDVVVDSMVVERAR--GESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 210 ~~~~~~~~~~~~~~-~~~-~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
.+.+++........ ... . ......++.++..+.........+.++.+ .++++...+....... +|.+++|.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~g~~i~~~~ 160 (420)
T PRK09528 84 SGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGS---LGWALCAFI 160 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhh---HHHHHHHHH
Confidence 44333322111010 111 0 11122223333333222222222233322 1234444444444444 999999999
Q ss_pred HHHhhhccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHH
Q 013568 285 SGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVF 364 (440)
Q Consensus 285 ~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 364 (440)
+|++.+ .+|++.|++.+++.++.++..+++++++.+++..+++++ + +..+...++.++.+|+|.+|...++.+
T Consensus 161 ~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~l~~~~~~~l~l~~~ 233 (420)
T PRK09528 161 AGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALG--A----NASAVSLKDALALLKLPKFWFLVLYVI 233 (420)
T ss_pred HHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchh--c----ccccccHHHHHHHccCCCeEeehHHHH
Confidence 998876 589999999888777766655544433322111111000 0 011223445667888988766554433
Q ss_pred hhhcccc-ccceeeeeeec---cCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 365 LWQATPH-SDSAMFYFTTN---ELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 365 ~~~~~~~-~~~~~~~~~~~---~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
....... ....+..+..+ ..+.+..+.|.+.....++..++.++.+++.||+|+|+.+..+.++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~ 304 (420)
T PRK09528 234 GVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAV 304 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 3222110 11112222221 2356667788888888888999999999999999999988776665444
No 80
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.82 E-value=3.2e-18 Score=172.17 Aligned_cols=280 Identities=20% Similarity=0.230 Sum_probs=202.8
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
+.+..+++..++..++ .+....++.++.+ +.-|+..++++.....++..+ +++.|.++||+ .||++++.+.+
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-----drrrili~~~~ 83 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRF-----DRRRILILSQL 83 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cchHHHHHHHH
Confidence 3455567777777776 4556566666666 688899999999999999877 99999999994 58888888777
Q ss_pred HHHHHHHHHHhhh----chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 211 LGALSWSLMATIV----ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 211 ~~~~~~~~~~~~~----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
+.++..+.++.+. .+.+.+++..++.|++.++..++.++++.|+.|+++...++++.+.... +..++||.++|
T Consensus 84 ~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~n---iar~iGPalgG 160 (524)
T PF05977_consen 84 LRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFN---IARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHH---HHHhccchHHH
Confidence 6655444433221 3567778888999999999999999999999999999999998888777 99999999999
Q ss_pred HhhhccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHh-cCcchhhhHHHHHh
Q 013568 287 SMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAV-KQPNVFLPTLFVFL 365 (440)
Q Consensus 287 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~l~~~~ 365 (440)
.++...|-.++|++.++..++..+....++.++..++..+ +.....+++-.+.. ++|.+...++..++
T Consensus 161 ~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~-----------e~~~~~l~~G~ryv~~~~~l~~~l~~~~~ 229 (524)
T PF05977_consen 161 ILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSLPR-----------ERFFSALREGLRYVRSSPPLRSVLLRSFL 229 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccch-----------hhhhhhHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999999999999988877665554444443322111111 12222333333333 46665555444444
Q ss_pred hhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q 013568 366 WQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTAL 432 (440)
Q Consensus 366 ~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~ 432 (440)
+.+... ....++++..+.+|.++..+|++.+..++|.++|.++.+++.+|++.++++..+.++.++.
T Consensus 230 ~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~ 297 (524)
T PF05977_consen 230 FNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALA 297 (524)
T ss_pred HHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHH
Confidence 433221 1222344445778999999999999999999999999999999999888877766655543
No 81
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.82 E-value=3.3e-18 Score=165.92 Aligned_cols=288 Identities=19% Similarity=0.221 Sum_probs=211.5
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~l~~~~~ 210 (440)
+.+....+-+..++. .....++..|+.|.+|+++..+|.++.+.-+--++ .|+.|.++||. .|+| ||||+++.+.+
T Consensus 13 eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~G-rfRP~lL~g~i 91 (467)
T COG2211 13 EKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWG-RFRPWLLWGAI 91 (467)
T ss_pred HHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccc-cccHHHHHHhH
Confidence 344556666666665 67888999999999999999999998888888888 89999999999 7899 99999999988
Q ss_pred HHHHHHHHHHhhhc------hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcc-cccccchhhhHHhhhhhhhHHHHHHH
Q 013568 211 LGALSWSLMATIVE------SKYSAALSILLGSLSVAFSDVVVDSMVVERARG-ESQSVSGSLQSLCWGSSAFGGIVSSY 283 (440)
Q Consensus 211 ~~~~~~~~~~~~~~------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~g~~ig~~ 283 (440)
..++...++. .++ ......+...+.+++++....+..++.+++.++ +||.+..+....+.. +|..+...
T Consensus 92 p~~i~~~l~F-~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~---~g~~l~~~ 167 (467)
T COG2211 92 PFAIVAVLLF-ITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFAS---LGGLLVAV 167 (467)
T ss_pred HHHHHHHHHH-cCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 8888777666 343 234556777899999999999999999999965 678877777766655 77666666
Q ss_pred HHHHhhh-------ccchHHHHHHHHHHHHHHHHhhe-eeccccccCCCcCCCCCCCCCccchhhHHH-HHHHHHHhcCc
Q 013568 284 FSGSMVD-------AYGVRFVFGVTALLPLITSGVAV-LVKEQQVLGPSRRQNLPLGDPSFFESSKQN-MFQLWEAVKQP 354 (440)
Q Consensus 284 i~g~l~~-------~~gw~~~f~i~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 354 (440)
+.+.+.. ..||+....+.+++..+..+.++ -.+|+..+....+. ..+.. .+++...++|+
T Consensus 168 ~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~-----------~~~~~~~~~~~~~~~Nr 236 (467)
T COG2211 168 LFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT-----------GVKLKLKDSFLLIFKNR 236 (467)
T ss_pred HHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc-----------cccccHHHHHHHHHccc
Confidence 6665542 35788888887777766666444 45665442221111 11222 23344567888
Q ss_pred chhhhHHHHHhhhccc-cccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHh
Q 013568 355 NVFLPTLFVFLWQATP-HSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 355 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~ 433 (440)
.+...++..++..... ...+.+.||.+..+|.++............+.+++.++.+++.+|+|+|+++.++.++.++..
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~ 316 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGY 316 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 8777665444433322 244445666667889888888888888888899989999999999999999999987777766
Q ss_pred hhhh
Q 013568 434 MTQV 437 (440)
Q Consensus 434 ~~~l 437 (440)
+...
T Consensus 317 ~~~~ 320 (467)
T COG2211 317 LLLY 320 (467)
T ss_pred HHHH
Confidence 5543
No 82
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.81 E-value=2.1e-19 Score=178.80 Aligned_cols=276 Identities=19% Similarity=0.251 Sum_probs=198.7
Q ss_pred HHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchhhhHHHHHHHHHHHHH
Q 013568 143 FVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSYLVLSGLLGALSWSLM 219 (440)
Q Consensus 143 ~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~l~~~~~~~~~~~~~~ 219 (440)
+...+. .....++.+|+.+.+|+++..+|++..+..+..++ +|+.|.++||. .|+| |||++++.+.++.+++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~G-rrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWG-RRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccccc-ccceEeehhhHHHHHHHHHh
Confidence 444443 45666888888998999999999998888888777 99999999987 6789 99999999999998887777
Q ss_pred Hhhh-c-------hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcc-cccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 220 ATIV-E-------SKYSAALSILLGSLSVAFSDVVVDSMVVERARG-ESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 220 ~~~~-~-------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
. .. + ....+.+..++..++......+..++..|+.++ ++|.+..+....+.. +|.++...+.+.+.+
T Consensus 90 f-~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~---~g~~l~~~~~~~l~~ 165 (428)
T PF13347_consen 90 F-SPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSM---IGSLLASFLAPILVS 165 (428)
T ss_pred h-ccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHH---HHHHHHHHHhhhhhh
Confidence 6 33 2 112345666777899999999999999999975 678877777776666 677666666665553
Q ss_pred cc-------chHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHH
Q 013568 291 AY-------GVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLF 362 (440)
Q Consensus 291 ~~-------gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 362 (440)
.. +|++..++.+++.++..+ ..+..+|++...+.+++ .....+..+..++||.++..++.
T Consensus 166 ~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~------------~~~~~~~~~~~~~nr~~~~l~~~ 233 (428)
T PF13347_consen 166 WFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK------------KISLRDSLRSLFRNRPFRILLLA 233 (428)
T ss_pred hhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc------------ccccccchhhhcccchHHHHHHH
Confidence 21 699999998888877666 45567772222111111 11223345667788887777666
Q ss_pred HHhhhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhhh
Q 013568 363 VFLWQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMTQ 436 (440)
Q Consensus 363 ~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~~ 436 (440)
.++...... ......|+..+.+|.+ ...+.+.....++.+++.++.+++.||+|+|+.+..+.++.++..+..
T Consensus 234 ~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 234 FFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL 307 (428)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH
Confidence 555444322 2333345555566755 566777788888999999999999999999999998888777665543
No 83
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.81 E-value=4e-18 Score=168.85 Aligned_cols=270 Identities=14% Similarity=0.096 Sum_probs=176.3
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
+++.+|..... +...+.++.++++++|++..++|++.++..++..+ ++++|.++|| +| +||+++.++.++..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr---~g-~~r~~~~~~~~~~~~~ 82 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADK---WL-SAQKVYAVCHFAGALL 82 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc-ccHHHHHHHHHHHHHH
Confidence 55666666665 67778899999888999999999999999999988 8999999999 45 5677777777666666
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhh--------hcccccccchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 216 WSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVER--------ARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~--------~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
..... +.++++.+.+.+++.+++.+...+...++..+. .....|.+..+ ++|.++||.++|.
T Consensus 83 ~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G---------~lG~~ig~~l~g~ 152 (418)
T TIGR00889 83 LFFAA-QVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG---------TIGFIAAMWAVSL 152 (418)
T ss_pred HHHHH-HhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh---------hHHHHHHHHHHHH
Confidence 55555 567788888888888888776666655554322 22233333222 2788888888887
Q ss_pred hhhccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhh
Q 013568 288 MVDAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQ 367 (440)
Q Consensus 288 l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 367 (440)
+.....|. .|++.+++.++..+..+++||++..+++++. + ..+....+..+.+|+|+++.+.+..++..
T Consensus 153 l~~~~~~~-~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-------~---~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 221 (418)
T TIGR00889 153 LDIELSNI-QLYITAGSSALLGVFALTLPDIPVAKSTAKM-------S---IKVMLGLDAFILFKNKRMAIFFFFSMLLG 221 (418)
T ss_pred hcccchhH-HHHHHHHHHHHHHHHHhcCCCCCCCcccccc-------C---HHHHhhhhHHHHhcCCCeeeHHHHHHHHH
Confidence 73333354 3556666555555555677776432111100 0 00111112345778998776665555533
Q ss_pred ccccccceeeeeeeccCCCC--------hhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q 013568 368 ATPHSDSAMFYFTTNELGFT--------PEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTAL 432 (440)
Q Consensus 368 ~~~~~~~~~~~~~~~~~g~s--------~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~ 432 (440)
........+...+.++.|.+ ....+.......++.+++.++.+++.||+|+|+++..+.++..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~ 294 (418)
T TIGR00889 222 APLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALR 294 (418)
T ss_pred hHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 31111111111111334443 356688888899999999999999999999999998887766554
No 84
>PRK11462 putative transporter; Provisional
Probab=99.81 E-value=4e-18 Score=170.74 Aligned_cols=270 Identities=16% Similarity=0.127 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchhhhHHHHHHH
Q 013568 137 AVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSYLVLSGLLGA 213 (440)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~l~~~~~~~~ 213 (440)
...++-+..++. .....++..|+.|.+|+++..+|.+..+..+.-++ .|+.|.++||. .++| ||||+++++.+..+
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~G-r~rp~il~g~i~~~ 91 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWG-KFRPWVLFGALPFG 91 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCC-CcchhHhHHHHHHH
Confidence 344444444444 56677888899999999999999998888888888 99999999998 6789 99999999988888
Q ss_pred HHHHHHHhhhch------hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhc-ccccccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 214 LSWSLMATIVES------KYSAALSILLGSLSVAFSDVVVDSMVVERAR-GESQSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 214 ~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
++.+++. ..+. ...+.+..++..+++.....+..++.+|+.+ +++|.+..++...+.. +|..+++.+..
T Consensus 92 i~~~llf-~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~---iG~~~~~~~~~ 167 (460)
T PRK11462 92 IVCVLAY-STPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLAT---AGGMLSTVLMM 167 (460)
T ss_pred HHHHHHH-hCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 7766655 3332 2234555667788999999999999999997 5688888777776665 77777776665
Q ss_pred Hhhhc-------cchHHHHHHHHHHHHHHHHhhe-eeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhh
Q 013568 287 SMVDA-------YGVRFVFGVTALLPLITSGVAV-LVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFL 358 (440)
Q Consensus 287 ~l~~~-------~gw~~~f~i~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 358 (440)
.+.+. .||+....+.+++.++..++.+ ..+|++..+ +++ .. ..+.++..++|+.++.
T Consensus 168 plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~--~~~----------~~---~~~~l~~~~~Nk~~~~ 232 (460)
T PRK11462 168 PLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAP--PTT----------TS---MREDLRDIWQNDQWRI 232 (460)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCC--ccC----------CC---HHHHHHHHhCChHHHH
Confidence 55443 3577777777776655554333 445543211 100 01 2234556778887666
Q ss_pred hHHHHHhhhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHH
Q 013568 359 PTLFVFLWQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTI 427 (440)
Q Consensus 359 ~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~ 427 (440)
++...++...... ......|+.....|. +...+.+....+++.+++..+++++.||+++|+.+..+..
T Consensus 233 l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~ 301 (460)
T PRK11462 233 VGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNA 301 (460)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 5543333222111 122223333334453 3445566677888899999999999999999888764443
No 85
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.81 E-value=7.5e-19 Score=172.19 Aligned_cols=244 Identities=17% Similarity=0.184 Sum_probs=163.9
Q ss_pred CChhhhHHHHHh--hhhhHH---H-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH--------HHH
Q 013568 165 LDPAETAVISGF--SSLPWL---I-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY--------SAA 230 (440)
Q Consensus 165 ~s~~~~g~~~s~--~~l~~~---~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~ 230 (440)
.++++.+.+.+. +..++. + ++++|+++|| +| ||+.++.+.++..++.++++ +.+++. .++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr---~g--~r~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 100 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR---IG--RKKTLVITLLMMGIGTLLIG-LLPSYATIGIWAPILLL 100 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh---hh--hHHHHHHHHHHHHHHHHHHh-hCCChhhhHHHHHHHHH
Confidence 455666655443 233332 3 6788999999 45 77888888888888877776 555543 478
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh--------hccchHHHHHHHH
Q 013568 231 LSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV--------DAYGVRFVFGVTA 302 (440)
Q Consensus 231 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~--------~~~gw~~~f~i~~ 302 (440)
+.|++.|++.+...+....++.|++++++|++..++...+.. +|.++++.+++.+. +.++||+.|++.+
T Consensus 101 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~---~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 177 (394)
T TIGR00883 101 LARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAP---VGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSA 177 (394)
T ss_pred HHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHH
Confidence 889999999999888999999999999999998888887777 88888888776553 3578999999887
Q ss_pred HHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcc--hhhhHHHHHhhhcccc-ccceeeee
Q 013568 303 LLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPN--VFLPTLFVFLWQATPH-SDSAMFYF 379 (440)
Q Consensus 303 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~-~~~~~~~~ 379 (440)
++.++..+.....+|++..+..+++.+ +..++.++.+++++ ++...+..++...... .......+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (394)
T TIGR00883 178 VLVLIGLYLRRNLEETPVFEKAQEKHK------------KKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTY 245 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHhccc------------cccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766665555455666543221111100 00111233444443 4443333333222111 11122333
Q ss_pred eeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHH
Q 013568 380 TTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFG 429 (440)
Q Consensus 380 ~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~ 429 (440)
..+++|.++.+.+.......++.+++.++.+++.||+|+|+.+.....+.
T Consensus 246 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 295 (394)
T TIGR00883 246 LTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLA 295 (394)
T ss_pred HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 34668899999999999999999999999999999999999777544433
No 86
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.81 E-value=3.8e-18 Score=190.16 Aligned_cols=284 Identities=11% Similarity=0.039 Sum_probs=187.8
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCCh--hhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDP--AETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~--~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
.+..+++..++..+. ......+..++..+++.+. ...+++.+++.+++.+ ++++|+++|| +| ||+.++++.
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr---~g--rk~~l~~~~ 84 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADK---FS--KNRVIRIVK 84 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccc---cc--HHHHHHHHH
Confidence 444455555555544 3444445555554466654 3468888889999888 8899999999 45 777777766
Q ss_pred HHHHHHHHHHH--hhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 210 LLGALSWSLMA--TIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 210 ~~~~~~~~~~~--~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
++.++..++.. ...++++.++++|++.|++.+...++..+++.|++++++|++++++.+.+.. +|.++|+.++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~---ig~~lg~~l~~~ 161 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTI---VAILAGTALFSF 161 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHH---HHHHHHHHHHHH
Confidence 54443333222 2346788899999999999999999999999999999999999999988887 999999999999
Q ss_pred hhhc--------c-chHHHHHHHHHHH-HHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchh
Q 013568 288 MVDA--------Y-GVRFVFGVTALLP-LITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVF 357 (440)
Q Consensus 288 l~~~--------~-gw~~~f~i~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 357 (440)
+.+. + +|.+.+.+.++.. ++.+++.+++||.+.......+.. . ....+...+.+..++++|.++
T Consensus 162 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~l~~~~~~~ 235 (1146)
T PRK08633 162 LFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKK--K----YLFPKLLWRNLKLLRSDRVLW 235 (1146)
T ss_pred HHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCccccccc--c----cccHHHHHHHHHHHhcCcHHH
Confidence 8875 2 3445444443333 333344556676543322110000 0 011122334455567788777
Q ss_pred hhHHHHHhhhcc-ccccceeeeeeeccCCCChh-hHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 358 LPTLFVFLWQAT-PHSDSAMFYFTTNELGFTPE-FLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 358 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~g~s~~-~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
..++..+++... ......++.+..+.+|++.. ..|++....+++.++|.++.+++.||+++++.+.++.++.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 236 LAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHH
Confidence 655443332221 11222233444467899988 899999999999999999999999999988777665544443
No 87
>TIGR00898 2A0119 cation transport protein.
Probab=99.81 E-value=1e-18 Score=177.77 Aligned_cols=260 Identities=16% Similarity=0.129 Sum_probs=179.7
Q ss_pred HHHhcCCC---hhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHH
Q 013568 159 LKDDLHLD---PAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSIL 234 (440)
Q Consensus 159 l~~~~g~s---~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (440)
+.+++|++ ..+.+++.+++.+++.+ .+++|+++|| +| ||++++++.++..++.++.+ ++++++.++++|+
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr---~G--rr~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~r~ 188 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR---FG--RKKVLLLSTLVTAVSGVLTA-FSPNYTVFLVFRL 188 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh---cc--chHHHHHHHHHHHHHHHHHH-HcccHHHHHHHHH
Confidence 44568998 88999999999999998 7889999999 45 77888888888888877777 7789999999999
Q ss_pred HHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhhee
Q 013568 235 LGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAVL 314 (440)
Q Consensus 235 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 314 (440)
+.|++.+...+...+++.|++|+++|+...++...++. +|.++++.+++.+.+ ||+.|++.++..++..+..++
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~---~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFS---LGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHH---HHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999888877777 899999988776643 999999999888777776678
Q ss_pred eccccccCCCcCCC--------------CCCCCCcc-----chhhHHH--HHHHHHHhcCcchhhhHHHHHhhhcccc-c
Q 013568 315 VKEQQVLGPSRRQN--------------LPLGDPSF-----FESSKQN--MFQLWEAVKQPNVFLPTLFVFLWQATPH-S 372 (440)
Q Consensus 315 ~~e~~~~~~~~~~~--------------~~~~~~~~-----~~~~~~~--~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~ 372 (440)
+||+++....+.+. ........ .+...+. ....++++++|.++...+...+..+... .
T Consensus 263 ~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 342 (505)
T TIGR00898 263 VPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFS 342 (505)
T ss_pred cCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 88876421110000 00000000 0000000 0134566778876655433322211100 1
Q ss_pred cceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhh
Q 013568 373 DSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGM 434 (440)
Q Consensus 373 ~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~ 434 (440)
.....+ ....++.+. .......++..+++.++.+++.||+|||+.+.++.++.++..+
T Consensus 343 ~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l 400 (505)
T TIGR00898 343 YYGLVL-DLGNLGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALL 400 (505)
T ss_pred HHHHhc-cccccCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 111111 113445443 2333456677888999999999999999998887766655543
No 88
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.80 E-value=9.4e-18 Score=156.97 Aligned_cols=280 Identities=16% Similarity=0.169 Sum_probs=216.3
Q ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 134 DNFAVAMVYFVQGVLGLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
.+..+...++..++.......+.+.+++.++++..+++++...+..+|.+ ..+.|++.+| +| +|.-++++..+.
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk---~g--yk~gi~lgL~l~ 88 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKK---LG--YKAGIVLGLLLY 88 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHH---hh--hHHHHHHHHHHH
Confidence 45566677778888776677788888888999999999999999999998 6788999999 45 777888998888
Q ss_pred HHHHHHHH--hhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 213 ALSWSLMA--TIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 213 ~~~~~~~~--~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
++++.++. ....++...+++.++.|.|.+...+..+.++..+.+++....++.+.+..++ +|.++||+++++++.
T Consensus 89 avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~---lGa~~gp~~g~~lil 165 (422)
T COG0738 89 AVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNG---LGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhh---hHHHHHHHHHHHHHH
Confidence 88877664 1346777888899999999999999999999999999887888888888888 999999999998876
Q ss_pred c-------------------cchHHHHHHHHHHHHHHHHhhee--eccccccCCCcCCCCCCCCCccchhhHHHHHHHHH
Q 013568 291 A-------------------YGVRFVFGVTALLPLITSGVAVL--VKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWE 349 (440)
Q Consensus 291 ~-------------------~gw~~~f~i~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (440)
+ -.|+++|.+.+...++..+.... .|+.+...+...+. +.. ...+
T Consensus 166 s~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~------------~~~--~~~~ 231 (422)
T COG0738 166 SGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGAS------------GSA--GLSS 231 (422)
T ss_pred hhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccc------------ccc--hHHH
Confidence 2 13788888777666555554433 33333222111110 000 3567
Q ss_pred HhcCcchhhhHHHHHhhhcccccccee-eeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHH
Q 013568 350 AVKQPNVFLPTLFVFLWQATPHSDSAM-FYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIF 428 (440)
Q Consensus 350 ~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~ 428 (440)
++++|.++...+..|+|...+.....+ ..+..+..|.+..+.+...+..+++.++|++++.++.+|+...|.+....++
T Consensus 232 l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~ 311 (422)
T COG0738 232 LFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALI 311 (422)
T ss_pred HHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 788999999999999998855433333 3334455899999999999999999999999999999999999988887766
Q ss_pred HHHHhhh
Q 013568 429 GTALGMT 435 (440)
Q Consensus 429 ~~~~~~~ 435 (440)
..++++.
T Consensus 312 ~ill~~~ 318 (422)
T COG0738 312 AILLLLA 318 (422)
T ss_pred HHHHHHH
Confidence 6655543
No 89
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.78 E-value=9.2e-18 Score=164.43 Aligned_cols=268 Identities=18% Similarity=0.201 Sum_probs=188.7
Q ss_pred HHhcC--CChhhhH----HHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHH--hhhchhHHHH
Q 013568 160 KDDLH--LDPAETA----VISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMA--TIVESKYSAA 230 (440)
Q Consensus 160 ~~~~g--~s~~~~g----~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~--~~~~~~~~~~ 230 (440)
.+.+| ++.++.. .+.+++.++.++ ..+.|+++|| +| ||..+.+..++..++.+++. ...+.+..++
T Consensus 46 ~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~---~G--RK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li 120 (485)
T KOG0569|consen 46 IERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADR---FG--RKNALLLSNLLAVLAALLMGLSKSAPSFEMLI 120 (485)
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hc--chHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34456 5555444 456667777777 5677999999 56 77777776666555544433 3457788999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH-hh-hccchHHHHHHHHHHHHHH
Q 013568 231 LSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS-MV-DAYGVRFVFGVTALLPLIT 308 (440)
Q Consensus 231 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~-l~-~~~gw~~~f~i~~~~~~~~ 308 (440)
+.|++.|+..+.......-++.|+.|.+.||..+.+..++.. +|..+|..++.. +. +...|.+.+....+.+++.
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~---~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~ 197 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVV---IGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ 197 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHH---HHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888888887 888888766653 22 3456999999999999999
Q ss_pred HHhheeeccccccCCC----cCCC----CCCCCC----ccchhh-----HH-----HHHHHHHHhcCcchhhhH----HH
Q 013568 309 SGVAVLVKEQQVLGPS----RRQN----LPLGDP----SFFESS-----KQ-----NMFQLWEAVKQPNVFLPT----LF 362 (440)
Q Consensus 309 ~~~~~~~~e~~~~~~~----~~~~----~~~~~~----~~~~~~-----~~-----~~~~~~~~l~~~~~~~~~----l~ 362 (440)
++...++||+|+.--. ++++ +..++. ...+.. .+ ....+++++++|...... ..
T Consensus 198 l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v 277 (485)
T KOG0569|consen 198 LALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVV 277 (485)
T ss_pred HHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHH
Confidence 9999999999864111 0000 000111 000000 00 111366778877655432 22
Q ss_pred HHhhhccccccceeeeeee---ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhhhh
Q 013568 363 VFLWQATPHSDSAMFYFTT---NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMTQV 437 (440)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~---~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~~l 437 (440)
.+..++ .+..+.++|.+ +..|++..++.++....++..++..+++.++.||+|||.+++.+..++.+..++..
T Consensus 278 ~~~qq~--sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~ 353 (485)
T KOG0569|consen 278 SFAQQF--SGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMS 353 (485)
T ss_pred HHHHHh--cCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 222222 23333333333 57899999999999999999999999999999999999999999988887776554
No 90
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.77 E-value=7.9e-19 Score=173.61 Aligned_cols=250 Identities=16% Similarity=0.114 Sum_probs=186.9
Q ss_pred HhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhh-chhHHHHHHHHHHHH
Q 013568 161 DDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIV-ESKYSAALSILLGSL 238 (440)
Q Consensus 161 ~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~ 238 (440)
++++.+..+.+++.+.+..|+.+ +.+.|+++|| +| -|+++..+.++.+++.++....+ .+++.++++|+++|+
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k---~G--~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADK---FG--ARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGL 140 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH---cC--chHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHH
Confidence 35789999999999999999999 7788999999 46 56677777777777776665333 344577999999999
Q ss_pred HHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHHhhe-eec
Q 013568 239 SVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA-YGVRFVFGVTALLPLITSGVAV-LVK 316 (440)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~-~gw~~~f~i~~~~~~~~~~~~~-~~~ 316 (440)
+.+...++...+.+.|.|++||++..++...+.. +|.+++-.++|++.+. +||+++|++.++++++..++++ +..
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q---~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQ---LGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHH---HHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999888887776 9999999999999988 9999999999999988877655 555
Q ss_pred cccccCCCcCCCCC---CCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc-cccceeeeeeeccCCCChhhHH
Q 013568 317 EQQVLGPSRRQNLP---LGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP-HSDSAMFYFTTNELGFTPEFLG 392 (440)
Q Consensus 317 e~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g 392 (440)
|+|.+++...+++. .+++...+..+......+++++++.+|.+.+..+...... ......+.|+.+.+|++..+.|
T Consensus 218 d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G 297 (466)
T KOG2532|consen 218 DSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETG 297 (466)
T ss_pred CCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhh
Confidence 55543221111000 0000000000001113567789999998887666654421 1222335556688999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCc
Q 013568 393 RVKFVTSVASLLGVGLYNGFLKNVPL 418 (440)
Q Consensus 393 ~~~~~~~i~~~~g~~~~~~l~~r~g~ 418 (440)
++.++..+.+.+..+++|.++||...
T Consensus 298 ~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 298 FLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998644
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.76 E-value=5.7e-17 Score=163.19 Aligned_cols=175 Identities=11% Similarity=0.126 Sum_probs=135.1
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhh-HHHHhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLP-WLIKPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~-~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+++..+...+. +.....++.|+++++|++.++.+++.+.+... +...+++|+++||+ +| ||+.++.+.++
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~--~G--~r~~~~~g~~~ 90 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHL--LG--TKRTIVLGAIV 90 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhc--cc--hHHHHHHHHHH
Confidence 466666666666666 56777888999988999999999988887744 44477889999984 56 88888888888
Q ss_pred HHHHHHHHHhhhch-hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccc--cccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 212 GALSWSLMATIVES-KYSAALSILLGSLSVAFSDVVVDSMVVERARGES--QSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
..++.+.++ ++.+ ...++++|+++|+|.+...+...+++.|.+|+++ |+.+.+++.++.. +|.++||.++|++
T Consensus 91 ~~~g~~~~~-~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~n---ig~~~g~~l~g~l 166 (489)
T PRK10207 91 LAIGYFMTG-MSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSIN---IGSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHH-HhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHH---HHHHHHHHHHHHH
Confidence 888887777 4444 3335578999999999998899999999998874 3555566665555 9999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHHhheeec
Q 013568 289 VDAYGVRFVFGVTALLPLITSGVAVLVK 316 (440)
Q Consensus 289 ~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 316 (440)
.+++|||+.|++.++..++..+.+.+.+
T Consensus 167 ~~~~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 167 ADKFGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999997654444444333333
No 92
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.76 E-value=1e-18 Score=162.31 Aligned_cols=232 Identities=17% Similarity=0.215 Sum_probs=183.2
Q ss_pred cCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHH
Q 013568 163 LHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVA 241 (440)
Q Consensus 163 ~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 241 (440)
.+-+.+++|++++...+...+ +|+.|.+.|| .| +|.-++++..++.++.++++ +.++++.++++|.++|+|.+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~---iG--y~ipm~~Gl~vmf~sTilFa-fg~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDR---IG--YKIPMVAGLFVMFLSTILFA-FGNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHH---hc--cccHHHHHHHHHHHHHHHHH-HcchhHHHHHHHHHhhhhHH
Confidence 466778899999999999887 9999999999 45 78788899999999998888 88999999999999999999
Q ss_pred hhhhhhhHHHHhhhccc-ccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhheeeccccc
Q 013568 242 FSDVVVDSMVVERARGE-SQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQV 320 (440)
Q Consensus 242 ~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~ 320 (440)
+..+...++++|.+|++ +|++++++.-.+.+ +|-++||.+||.+.+..|.+..|.+.+++.++...+.+++-|+.+
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfis---lG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFIS---LGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHh---ccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc
Confidence 99999999999999987 57988888776777 999999999999999999999999999999888776665555433
Q ss_pred cCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhc-cccccceeeeeeeccCCCChhhHHHHHHHHH
Q 013568 321 LGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQA-TPHSDSAMFYFTTNELGFTPEFLGRVKFVTS 399 (440)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~ 399 (440)
.++... ++-...++++++|.++.........+. .....-....|..+...-+..+.|+.+....
T Consensus 252 ~~~~~~---------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~ 316 (464)
T KOG3764|consen 252 MDPDST---------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPAS 316 (464)
T ss_pred cCcccc---------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccc
Confidence 222111 111236678899988776543333222 1112333334444666644558999999999
Q ss_pred HHHHHHHHHHHHhhccCCc
Q 013568 400 VASLLGVGLYNGFLKNVPL 418 (440)
Q Consensus 400 i~~~~g~~~~~~l~~r~g~ 418 (440)
+..++|..+.+.+.||++.
T Consensus 317 ~~y~ig~~lfg~la~k~~~ 335 (464)
T KOG3764|consen 317 LSYAIGTNLFGKLADKYPH 335 (464)
T ss_pred cchhccCchHHHHHHhcCc
Confidence 9999999999999999984
No 93
>PRK09848 glucuronide transporter; Provisional
Probab=99.75 E-value=4.9e-16 Score=155.65 Aligned_cols=280 Identities=14% Similarity=0.104 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchhhhHHHHHHH
Q 013568 137 AVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSYLVLSGLLGA 213 (440)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~l~~~~~~~~ 213 (440)
...++-+...+. +.....++.|+++.+|++..++|++.++..+..++ +|++|+++||. +++| |||++++.+.+...
T Consensus 12 ~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~G-r~~~~~~~~~~~~~ 90 (448)
T PRK09848 12 GYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWG-KFRPFLLFGTAPLM 90 (448)
T ss_pred hhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCc-CchHHHHHHHHHHH
Confidence 344444444444 45556677899998999999999999999998888 89999999998 6678 88888877766555
Q ss_pred HHHHHHHhhh----ch--hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcc-cccccchhhhHHhhh--hhhhHHHHHHHH
Q 013568 214 LSWSLMATIV----ES--KYSAALSILLGSLSVAFSDVVVDSMVVERARG-ESQSVSGSLQSLCWG--SSAFGGIVSSYF 284 (440)
Q Consensus 214 ~~~~~~~~~~----~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~--~~~~g~~ig~~i 284 (440)
+..+++.... .+ .....+..++.+++.+...++..++..++.++ ++|.+..+....+.. ..+++..++|.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i 170 (448)
T PRK09848 91 IFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSI 170 (448)
T ss_pred HHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5444432122 11 12234445677888888888888888887755 567766555443322 223555666666
Q ss_pred HHHhhhcc--chHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHH
Q 013568 285 SGSMVDAY--GVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTL 361 (440)
Q Consensus 285 ~g~l~~~~--gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 361 (440)
.+...... +|.....+.+++.++..+ .....+|+...+. ++ ....+..+.+++||.++...+
T Consensus 171 ~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~--~~-------------~~~~~~~~~l~~n~~f~~~~~ 235 (448)
T PRK09848 171 KNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIV--AQ-------------PSLKISLQTLKRNRPLFMLCI 235 (448)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCc--cC-------------CCHHHHHHHHhCCchHHHHHH
Confidence 55331111 121111222333333222 2334455432111 00 012233556789998777665
Q ss_pred HHHhhhccc-cccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHH
Q 013568 362 FVFLWQATP-HSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTAL 432 (440)
Q Consensus 362 ~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~ 432 (440)
..+++.... .......++..+.+|.++...++......++.+++.++.+++.||+|+|+.+.++.++.++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~ 307 (448)
T PRK09848 236 GALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCG 307 (448)
T ss_pred HHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 444433321 12223445555678876655555555556778889999999999999999988877655443
No 94
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.75 E-value=2e-16 Score=161.00 Aligned_cols=254 Identities=19% Similarity=0.211 Sum_probs=176.4
Q ss_pred hhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhh
Q 013568 169 ETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVV 247 (440)
Q Consensus 169 ~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 247 (440)
+.+++.++..++..+ +++.|+++|+ +| ||..++++.++..++.++.+ ++++..+++++|++.|+|.|....+.
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~---~G--Rk~~l~~~~~~~~iG~ii~~-~a~~~~~l~~GR~l~G~g~G~~~~~~ 163 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDR---IG--RKKTLLLAVVLFLIGAIIIA-LAPSWYQLIVGRILTGLGVGGASVLA 163 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---hh--hHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHhccchhhhhhcc
Confidence 458999999999888 7889999999 46 88899999999999999888 88899999999999999999999999
Q ss_pred hHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc--cchHHHHHHHHHHHHHHHHhheeeccccccCCCc
Q 013568 248 DSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA--YGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSR 325 (440)
Q Consensus 248 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~--~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~ 325 (440)
..+++|+.|++.||...+..+.... +|..++ .+.+...++ ++||..+.+..+.+++..+..+++||+|+.-.+.
T Consensus 164 piy~sEiap~~~RG~l~~~~~l~~~---~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~ 239 (513)
T KOG0254|consen 164 PVYISEIAPAHIRGTLVSLYQLFIT---IGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEK 239 (513)
T ss_pred hhhHhhcCChhhhHHHHHHHHHHHH---HHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHc
Confidence 9999999999999999888888877 888888 444544444 4899999999888888777778899988652221
Q ss_pred CCCC-------CCCC--CccchhhHHHHH-----H--------HHHHhcCcchhh----hHHHHHhhhccccccceeeee
Q 013568 326 RQNL-------PLGD--PSFFESSKQNMF-----Q--------LWEAVKQPNVFL----PTLFVFLWQATPHSDSAMFYF 379 (440)
Q Consensus 326 ~~~~-------~~~~--~~~~~~~~~~~~-----~--------~~~~l~~~~~~~----~~l~~~~~~~~~~~~~~~~~~ 379 (440)
.+.. ..++ +...+...+..+ . .+.-+..|..+. .+....+.++ . +.....+|
T Consensus 240 g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~-t-G~~~~~~Y 317 (513)
T KOG0254|consen 240 GRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQL-T-GINYVFYY 317 (513)
T ss_pred CChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHH-h-CCceEEee
Confidence 1110 0111 000000000000 0 011111132222 2222223333 2 33333333
Q ss_pred ee---ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhh
Q 013568 380 TT---NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 380 ~~---~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~ 435 (440)
.. +..|.+... .....+.++..+++..++.++.||+|||++++.+...+.+..++
T Consensus 318 ~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~ 375 (513)
T KOG0254|consen 318 STTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVI 375 (513)
T ss_pred hHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHH
Confidence 33 456666443 45556677788888888899999999999999988777766553
No 95
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.75 E-value=7.3e-16 Score=152.70 Aligned_cols=287 Identities=17% Similarity=0.187 Sum_probs=174.0
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~l~~~~~ 210 (440)
+++.++...+...+. ......+++|+++ +|++....+++..+..+...+ +|++|+++||. .++| |||++++.+.+
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~G-RRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFG-RRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCC-ChHHHHHHHHH
Confidence 444455555555555 5667777888766 899999999998888877766 99999999975 4588 88888877777
Q ss_pred HHHHHHHHHHhhhchh-----------------HHHHHHHHHHHHHHHhhhhhhhHHHHhhhccccc--ccchhhhHHhh
Q 013568 211 LGALSWSLMATIVESK-----------------YSAALSILLGSLSVAFSDVVVDSMVVERARGESQ--SVSGSLQSLCW 271 (440)
Q Consensus 211 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~ 271 (440)
..+++..+++ ++++. ...+++..+..++.+...++..++++|+.|+++| +.+.++.+.+.
T Consensus 83 ~~~~~l~ll~-~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~ 161 (477)
T TIGR01301 83 LVAFAVILIG-FAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFM 161 (477)
T ss_pred HHHHHHHHHH-hCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHH
Confidence 7777766666 43332 1223444455667888888999999999998865 46777777777
Q ss_pred hhhhhHHHHHHHHHHHh--hhcc-------------chHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCc
Q 013568 272 GSSAFGGIVSSYFSGSM--VDAY-------------GVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPS 335 (440)
Q Consensus 272 ~~~~~g~~ig~~i~g~l--~~~~-------------gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~ 335 (440)
. +|.++|+.++++. .+.+ +.++.|++.+++.++..+ ..++.+|.+...+++.++++.++..
T Consensus 162 ~---lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~ 238 (477)
T TIGR01301 162 A---IGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPS 238 (477)
T ss_pred H---HHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhccccc
Confidence 7 9999999999875 2211 568899998887777665 5667888764322211100000000
Q ss_pred cchhhHHHHHHHHHHhc-Cc-chhhhHHHHHhhhccccccceeeeeee-----ccCCCChh------h---HH-HHHHHH
Q 013568 336 FFESSKQNMFQLWEAVK-QP-NVFLPTLFVFLWQATPHSDSAMFYFTT-----NELGFTPE------F---LG-RVKFVT 398 (440)
Q Consensus 336 ~~~~~~~~~~~~~~~l~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~g~s~~------~---~g-~~~~~~ 398 (440)
.......++++++.++ -| .++.+++..++..+ ....+.+|.+ +.++-++. + .| +.....
T Consensus 239 -~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~---a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~ 314 (477)
T TIGR01301 239 -KHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWI---AWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLN 314 (477)
T ss_pred -ccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHH---HHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHH
Confidence 0011223344444443 23 35555544444222 1111111111 22332221 1 12 223445
Q ss_pred HHHHHHHHHHHHHhhccCCc-hhHHHHHHHHHH
Q 013568 399 SVASLLGVGLYNGFLKNVPL-RKIFLANTIFGT 430 (440)
Q Consensus 399 ~i~~~~g~~~~~~l~~r~g~-r~~l~~~~~~~~ 430 (440)
.+...+.+++..++.+|+|+ |+....+.++.+
T Consensus 315 s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~ 347 (477)
T TIGR01301 315 SVVLGITSIGMEKLCRGWGAGKRLWGIVNIILA 347 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 55666777788889999985 555455543333
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.73 E-value=9.8e-16 Score=148.36 Aligned_cols=170 Identities=15% Similarity=0.103 Sum_probs=137.2
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhcCCChhh-hHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVLGLARLAVNFYLKDDLHLDPAE-TAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~-~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
+|+..|+..+........| ++.+++|++.++ .|.+.+.+..+|++ +.+.|+++||+ | -|+++.++.+...+.
T Consensus 32 lC~fGF~~e~R~n~s~a~p-~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl---G--~K~vL~l~~l~Wsl~ 105 (511)
T TIGR00806 32 LCFYGFMAQFRPGESFITP-YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL---R--YKPVLVLQALSFVCV 105 (511)
T ss_pred HHHHHHHHHhhchHHHHHH-HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh---C--chHHHHHHHHHHHHH
Confidence 4444455555545554444 555579999999 99999999999999 88999999994 4 778888888888888
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchH
Q 013568 216 WSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVR 295 (440)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~ 295 (440)
.++++ ++++...+.++|++.|++.|... +...++..++|+++|+++.++...+.. +|.+++++++++ ...+|||
T Consensus 106 t~L~~-fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~---vG~~Ia~~L~ql-l~s~gWr 179 (511)
T TIGR00806 106 WLLLL-LGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVL---LGVFLSSVLGQL-LVTLGWI 179 (511)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-HHhcCch
Confidence 88888 77889999999999999999998 999999999999999999999887777 999999999999 4568998
Q ss_pred HHHHHH---HHHHHHHHHhheeecccc
Q 013568 296 FVFGVT---ALLPLITSGVAVLVKEQQ 319 (440)
Q Consensus 296 ~~f~i~---~~~~~~~~~~~~~~~e~~ 319 (440)
+-+.+. .....+++++.+++|..+
T Consensus 180 ~y~~Ln~Isl~s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 180 SYSTLNIISLVFMTFSVFLALFLKRPK 206 (511)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 775443 333344555667777544
No 97
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.72 E-value=9e-16 Score=154.37 Aligned_cols=173 Identities=16% Similarity=0.154 Sum_probs=138.6
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHh--cCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDD--LHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~--~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
.++.+.+..+...+. +.....++.|++++ +|++..+.+++.+.+.+...+ .+++|+++||+ +| ||+.++++.
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~--~G--~~~~l~~~~ 86 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRV--WG--TKKTMVLGG 86 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhh--cc--hHHHHHHHH
Confidence 456666667776666 56777899999887 899999999999999988777 67889999993 46 788888888
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccc---cccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 210 LLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGES---QSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
++.+++.++++ .+++.+.+.+.+++.|++.+...+...++++|++++++ |+.+.+++.. +.|+|.++||.+++
T Consensus 87 ~~~~~g~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~---~~niG~~ig~~l~g 162 (475)
T TIGR00924 87 IVLMLGHFMLA-MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYM---SINIGSFISPLLAG 162 (475)
T ss_pred HHHHHHHHHHH-hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHH---HHHHHHHHHHHHHH
Confidence 88888877777 56667777888999999999988899999999998765 5555555444 44599999999999
Q ss_pred HhhhccchHHHHHHHHHHHHHHHHhhee
Q 013568 287 SMVDAYGVRFVFGVTALLPLITSGVAVL 314 (440)
Q Consensus 287 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 314 (440)
++.+++||++.|++.++..++..+.+++
T Consensus 163 ~l~~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 163 VIAENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999899999999988665555444433
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.70 E-value=7e-15 Score=148.79 Aligned_cols=170 Identities=12% Similarity=0.116 Sum_probs=128.2
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+++..++..+. +....+++.|+++++|++..+.+++.+.+...... .+++|+++||+ +| ||+.++.+.++
T Consensus 22 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~--~G--~r~~~~~g~~~ 97 (500)
T PRK09584 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKV--LG--TKRVIMLGAIV 97 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cc--hHHHHHHHHHH
Confidence 466666666666665 57777899999888999999988877766544333 56889999993 36 77788888888
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhccccc--ccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 212 GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQ--SVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
..++..+++...++...+.+.+++.|++.+...+...+++.|++|++++ ..+.+++..+. ++|.++||.++|++.
T Consensus 98 ~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~---~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 98 LAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSI---NIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHH---HHHHHHHHHHHHHHH
Confidence 8877777663223455667788999999998888888999999986542 23444444444 499999999999999
Q ss_pred hccchHHHHHHHHHHHHHHHH
Q 013568 290 DAYGVRFVFGVTALLPLITSG 310 (440)
Q Consensus 290 ~~~gw~~~f~i~~~~~~~~~~ 310 (440)
+++|||+.|++.++..++..+
T Consensus 175 ~~~g~~~~F~i~~i~~~i~~i 195 (500)
T PRK09584 175 AKYGWSVAFALSVVGMLITVV 195 (500)
T ss_pred HhhCHHHHHHHHHHHHHHHHH
Confidence 999999999998765555443
No 99
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.69 E-value=5e-16 Score=149.45 Aligned_cols=281 Identities=16% Similarity=0.173 Sum_probs=169.0
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhH-HHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVL-SGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~-~~~ 210 (440)
.++.+...++...+. +...+..+.+++++.|+|.+++|.+.++..+...+ +|+.|.++|| .| .||..+.. +.+
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk---lg-~kK~Ll~~i~~l 83 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK---LG-LKKHLLWFIAIL 83 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH---CT-TCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch---hh-hhHHHHHHHHHH
Confidence 566777777777776 78888999999987799999999999998887777 9999999999 56 56655443 222
Q ss_pred HHHHHHHHHHhh----hchhH-HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH
Q 013568 211 LGALSWSLMATI----VESKY-SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 211 ~~~~~~~~~~~~----~~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~ 285 (440)
+...+......+ ..+.. ..+++-+..++......++..++..+....+.-. ++-....|++|.+++..++
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~fe-----YG~~R~wGSig~ai~s~~~ 158 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFE-----YGRARMWGSIGFAIASLLA 158 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCC-----cchHHHHhhHHHHHHHHHh
Confidence 222222111111 12221 1122222333444445556666666655443211 2222233458999999999
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHhheeec-cccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHH
Q 013568 286 GSMVDAYGVRFVFGVTALLPLITSGVAVLVK-EQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVF 364 (440)
Q Consensus 286 g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 364 (440)
|.+.+ .+-+..||+..+.+++..++.++.+ +.++..+..+.... ++.+...++..+++|+|++|.+.++..
T Consensus 159 G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~k~~~fw~~~l~v~ 230 (412)
T PF01306_consen 159 GILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGA-------KKDKVSLKDVLSLFKMRNFWFFVLFVI 230 (412)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS-------------HHHHHHHTTSHHHHHHHHHHH
T ss_pred heeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccccc-------CCCCCcHHHHHHHhcchhHHHHHHHHH
Confidence 99986 5677888887766655555443333 32221111111000 122345677889999999999887666
Q ss_pred hhhccc-cccceeeeeee---ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 365 LWQATP-HSDSAMFYFTT---NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 365 ~~~~~~-~~~~~~~~~~~---~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
.....+ .....+..|+. +..+.+....|++.+..-+..++...+.+++.+|+|.|+.++++.+++++
T Consensus 231 g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~i 301 (412)
T PF01306_consen 231 GVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAI 301 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHH
Confidence 543322 12333322222 23344556789999999999999999999999999999999988777654
No 100
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.69 E-value=6.9e-16 Score=142.78 Aligned_cols=244 Identities=18% Similarity=0.198 Sum_probs=157.7
Q ss_pred CCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHh
Q 013568 164 HLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAF 242 (440)
Q Consensus 164 g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 242 (440)
+.+..-.|.+-+.+.+...+ .|.||-++|| +| ||++++++.+..+++..+.+ .+.++..+++.|++.|+..+.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~---yG--Rkpvll~c~~~va~s~ll~~-~S~~F~afv~aR~l~Gi~kgn 137 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDR---YG--RKPVLLACLIGVALSYLLWA-LSRNFAAFVLARFLGGIFKGN 137 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhh---hC--chHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhccCc
Confidence 33455678888889999888 8999999999 45 99999999999999888877 888996666779999999887
Q ss_pred hhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh---ccchHHHH---HHHHHHHHH-HHHhheee
Q 013568 243 SDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD---AYGVRFVF---GVTALLPLI-TSGVAVLV 315 (440)
Q Consensus 243 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~---~~gw~~~f---~i~~~~~~~-~~~~~~~~ 315 (440)
.. +..++++|++++++|+.+++..+..++ +|.++||.+||++.+ ..|--+-+ ++..+++.. ..+..+++
T Consensus 138 l~-v~rAiisdV~sek~r~l~ms~v~~a~~---lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~l 213 (451)
T KOG2615|consen 138 LS-VIRAIISDVVSEKYRPLGMSLVGTAFG---LGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFL 213 (451)
T ss_pred hH-HHHHHHHhhcChhhccceeeeeehhhh---cchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhC
Confidence 64 788999999999999999999999999 999999999999987 22311111 222222222 23355688
Q ss_pred ccccccCCCcCCCCCCCC--CccchhhHHHHHHHHHHhcCcchhh------h-HHHHHhhhcccc-ccceeeeeeeccCC
Q 013568 316 KEQQVLGPSRRQNLPLGD--PSFFESSKQNMFQLWEAVKQPNVFL------P-TLFVFLWQATPH-SDSAMFYFTTNELG 385 (440)
Q Consensus 316 ~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~------~-~l~~~~~~~~~~-~~~~~~~~~~~~~g 385 (440)
||+-+.++..+.+...++ ++..+..+.....-...++|+.... . .+-.++|..... .......+..+.+|
T Consensus 214 pETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg 293 (451)
T KOG2615|consen 214 PETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFG 293 (451)
T ss_pred CccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccC
Confidence 887543322211111000 0011111111222223455553221 1 111222222111 11111222236799
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013568 386 FTPEFLGRVKFVTSVASLLGVGLYNGFLKNVP 417 (440)
Q Consensus 386 ~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g 417 (440)
+++.+.|.+....++.+++......+..+|.+
T Consensus 294 ~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~ 325 (451)
T KOG2615|consen 294 YSSMQQGKVLSTTGLLMLVIQLALVPILPRYK 325 (451)
T ss_pred CChhhheeeeehhhHHHHHHHHhccccccccc
Confidence 99999999998888877777766677677765
No 101
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.67 E-value=1.1e-14 Score=142.47 Aligned_cols=272 Identities=20% Similarity=0.286 Sum_probs=178.8
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
+...+|.+.+. +...+.++.|+++ .|+|.+++|.+.++..+...+ .|++|+++||. + ++|+++.+..++.++.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~---~-~~~~~l~~~~l~~~~~ 81 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRF---G-SAKRILALLSLLSALA 81 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHh---h-hHHHHHHHHHHHHHHH
Confidence 55556666665 6777788999998 599999999999998888887 67999999994 3 5677776666665555
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHH-HHHhhhccc-
Q 013568 216 WSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYF-SGSMVDAYG- 293 (440)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i-~g~l~~~~g- 293 (440)
..... ..++++.++++.++..+......+..+++..+...+++ ...+..... |++|-+++... ++.+....+
T Consensus 82 ~~~~~-~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~-~~YG~iRlw----GSiGf~~~~~~~~~~~~~~~~~ 155 (400)
T PF03825_consen 82 LLLLA-FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRG-KDYGRIRLW----GSIGFIVAALAFGGLLGGYLGI 155 (400)
T ss_pred HHHHH-HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccc-CCCCcchhh----hhHHHHHHHHHHHHHHHhhhcc
Confidence 44444 55677777777788888888888888888888876432 223333321 22666666443 233333222
Q ss_pred --hHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc
Q 013568 294 --VRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH 371 (440)
Q Consensus 294 --w~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 371 (440)
..+.+++.++..++.....+.+|+.+.+++.+++ ..+...++.++++|+|++..+.+..++.+....
T Consensus 156 ~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~-----------~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~ 224 (400)
T PF03825_consen 156 SGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKES-----------VKKLLGLDALKLLKNPRFLVFLLAAFLIGISHA 224 (400)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhCCCCccccccCCC-----------cccccchHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 3345666665555444455667776532221111 111223345678999998887776666655221
Q ss_pred ccceeeeeeeccCC-CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 372 SDSAMFYFTTNELG-FTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 372 ~~~~~~~~~~~~~g-~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
....+...+-++.| .+....|....+..++.++..+..+++.+|+|.++++.++.++.++
T Consensus 225 ~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 225 AYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAV 285 (400)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 11122111225666 6777788888888889999999999999999999999888766543
No 102
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.66 E-value=4.8e-15 Score=149.01 Aligned_cols=147 Identities=16% Similarity=0.235 Sum_probs=113.7
Q ss_pred HHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHH
Q 013568 154 AVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALS 232 (440)
Q Consensus 154 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (440)
...+++..++|-+ ....|+.+...++.++ .|+.|.++|. +| ||.+++.+.++..++.++.+ .+++...++.+
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDl---fG--Rr~~~i~g~~l~vvG~Iv~a-tA~~~~~~iag 137 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDL---FG--RRYFFIIGSLLGVVGSIVCA-TAQNMNTFIAG 137 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHH---hc--chHHHHHHHHHHHhHHHHhh-cCCcHHHHHHH
Confidence 3334555557765 5566777777787777 8899999998 66 99999999999999998888 88999999999
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHh
Q 013568 233 ILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGV 311 (440)
Q Consensus 233 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~ 311 (440)
..+.|+|.|... .....++|+.|.+.|.....+...... +...+++.++..+..+.+|||.|++.+++..+.++.
T Consensus 138 ~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i---~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 138 MVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFI---ITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHH---hhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 999999988776 455668999999988766555544333 444466777766666678999999999887776653
No 103
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.65 E-value=3.5e-14 Score=134.41 Aligned_cols=265 Identities=18% Similarity=0.173 Sum_probs=180.3
Q ss_pred HHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhccccC-cCCCCcchhhhHHHHHHHHHHHHHHh----hhc-------hh
Q 013568 159 LKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSLP-LFGYRRRSYLVLSGLLGALSWSLMAT----IVE-------SK 226 (440)
Q Consensus 159 l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~~-~~G~~rr~~l~~~~~~~~~~~~~~~~----~~~-------~~ 226 (440)
+..|+++.....+.+.++..+..-..+.+|+.||+.+ .+|+||-|++..+..+...+..+... ... +.
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 4456899999888886666555555889999999997 89989999999988877765444331 112 11
Q ss_pred --H--HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHH
Q 013568 227 --Y--SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTA 302 (440)
Q Consensus 227 --~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~ 302 (440)
+ ...++..+.|+|.+...+...+++.|..++++|++..++.-.+.. +|.+++..+.|.+.+.+...-...+..
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli---~G~iv~ai~~g~lL~~~s~~rL~~v~~ 162 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLI---VGIIVSAIVFGRLLDPFSPERLIQVIQ 162 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHH---HHHHHHHHHHHHHccccCHHHHHHHHH
Confidence 1 234667888999999999999999999999999999888877777 999999999999888776443333322
Q ss_pred HHHHH---HHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc-ccceeee
Q 013568 303 LLPLI---TSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH-SDSAMFY 378 (440)
Q Consensus 303 ~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~ 378 (440)
...++ ..++..+-.|++..+.....++ ++ ...++ ...++..+|+...+.++.++...... -+...-.
T Consensus 163 ~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~--~~----~~f~~---a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEP 233 (403)
T PF03209_consen 163 GVALIALLLNLIALWGQEPRRSRRAAAAER--PR----PPFRE---AWRQVWASPQARRFFVFLFLGTLAFFMQDVILEP 233 (403)
T ss_pred HHHHHHHHHHHHHHHhcccCCcccccCCCC--CC----ccHHH---HHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCC
Confidence 22222 2223334445444332211110 00 12233 33445578887777776666554222 2223334
Q ss_pred eeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhc-cCCchhHHHHHHHHHHHHhhh
Q 013568 379 FTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLK-NVPLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 379 ~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~-r~g~r~~l~~~~~~~~~~~~~ 435 (440)
|--+.+|++..+...+....+.|.++|..+.+++.. |.++++.-.+++.++++...+
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~l 291 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFAL 291 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH
Confidence 455789999999999999999999999999998875 677777776666666555443
No 104
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.63 E-value=2.8e-14 Score=131.96 Aligned_cols=256 Identities=16% Similarity=0.145 Sum_probs=188.6
Q ss_pred HHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHH
Q 013568 154 AVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALS 232 (440)
Q Consensus 154 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (440)
.+...+++++|+|.+.+|+++++..+.+.+ .|+..++..| +| -...+..+.++..++..+=. ..+...++..
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~---~g--~er~l~~~Llli~~G~~iR~--~~~~~~L~~g 105 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR---FG--EERSLFLALLLIAAGILIRS--LGGLPLLFLG 105 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH---Hh--hHHHHHHHHHHHHHHHHHHh--cccHHHHHHH
Confidence 344456677999999999999999999887 8999999998 56 45566667666666654433 2356677888
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHHHHh
Q 013568 233 ILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY-GVRFVFGVTALLPLITSGV 311 (440)
Q Consensus 233 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~-gw~~~f~i~~~~~~~~~~~ 311 (440)
-.+.|.+.+..++..++++.+.+|++. +..+++|+.... +|..+++.+...+.++. |||.....-+.++++.+++
T Consensus 106 t~l~G~gIav~nVLLPslIK~~Fpk~~-~~mtglYs~sl~---~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 106 TLLAGAGIAVINVLLPSLIKRDFPKRV-GLMTGLYSTSLG---AGAALAAALAVPLAQHSGGWRGALGFWALLALLALLI 181 (395)
T ss_pred HHHHHhhHHHHHHhhhHHHHhhcccch-hhHHhHHHHHHH---HHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998875 678899998888 99999999999998877 7999999989888888776
Q ss_pred heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccccccceeeeeeeccCCCChhhH
Q 013568 312 AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEFL 391 (440)
Q Consensus 312 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 391 (440)
++.-..+++ .+..+ ...++...++|+|..|.+.+|+-+....+.....+..-+..+.|+|+.++
T Consensus 182 WlPq~~r~~-~~~~~---------------~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~a 245 (395)
T COG2807 182 WLPQALREQ-AASIA---------------TKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEA 245 (395)
T ss_pred Hhhhccccc-ccccc---------------cccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHh
Confidence 663321111 11100 01111234678999999998887755533333333221225789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhhh
Q 013568 392 GRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMTQ 436 (440)
Q Consensus 392 g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~~ 436 (440)
|.......+..+...+..+.+.+|.+.++.+.+...++...+++-
T Consensus 246 G~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G 290 (395)
T COG2807 246 GSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVG 290 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999988766665555555554444443
No 105
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.62 E-value=3.1e-14 Score=142.81 Aligned_cols=255 Identities=16% Similarity=0.179 Sum_probs=177.9
Q ss_pred HHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHH
Q 013568 154 AVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALS 232 (440)
Q Consensus 154 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (440)
.+-..++++++.+..+++|+.++....+.+ +|+.+.+.|| +| .|.+.+++.++..+++++.. ++++.+.+++.
T Consensus 67 v~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~r---fg--~R~v~i~G~~v~~~g~~lss-F~~~i~~l~lt 140 (509)
T KOG2504|consen 67 LLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNR---FG--CRTVMIAGGLVAALGLLLSS-FATSLWQLYLT 140 (509)
T ss_pred hhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhh---cC--chHHHHHHHHHHHHHHHHHH-HHhhHHHHHHH
Confidence 334455666899999999999888776666 9999999999 55 88889999889989888777 67777666554
Q ss_pred H-HHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHh
Q 013568 233 I-LLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGV 311 (440)
Q Consensus 233 ~-~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~ 311 (440)
. ++.|+|.++........+..++++ +|+.+.++...+.+ +|.++-|.+..++.+.+|||+.+++.+.+.+-.++.
T Consensus 141 ~gvi~G~G~~~~~~paiviv~~YF~k-kR~lA~Gia~~GsG---~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~ 216 (509)
T KOG2504|consen 141 FGVIGGLGLGLIYLPAVVILGTYFEK-KRALATGIAVSGTG---VGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVA 216 (509)
T ss_pred HHHHhhccchhhhcchhhhhhhHhHH-HHHHHHhhhhccCC---cceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 4 899999999888888888867654 67889888888888 999999999999999999999999998887666554
Q ss_pred heeecc-ccccCCC---------------------cC--CCCC-C-----------CCCccchhhHHHHHH---HHHHhc
Q 013568 312 AVLVKE-QQVLGPS---------------------RR--QNLP-L-----------GDPSFFESSKQNMFQ---LWEAVK 352 (440)
Q Consensus 312 ~~~~~e-~~~~~~~---------------------~~--~~~~-~-----------~~~~~~~~~~~~~~~---~~~~l~ 352 (440)
...+++ .+...+. .. +... . +.+...+........ -.++++
T Consensus 217 ~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~ 296 (509)
T KOG2504|consen 217 GALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLK 296 (509)
T ss_pred HHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHc
Confidence 443333 1110000 00 0000 0 000000000011111 146788
Q ss_pred CcchhhhHHHHHhhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 013568 353 QPNVFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPL 418 (440)
Q Consensus 353 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~ 418 (440)
+|.++.+.+...+....+........-+.+.+|++..+++.+..+.++..++|.++.|++.|+...
T Consensus 297 ~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~ 362 (509)
T KOG2504|consen 297 DPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGI 362 (509)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcccc
Confidence 988777766555544421111111111225789999999999999999999999999999999873
No 106
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.62 E-value=1.2e-14 Score=148.47 Aligned_cols=261 Identities=15% Similarity=0.060 Sum_probs=176.7
Q ss_pred HhcCCChhhhHHHHHhhhhhHHHHh-hhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHH
Q 013568 161 DDLHLDPAETAVISGFSSLPWLIKP-LYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLS 239 (440)
Q Consensus 161 ~~~g~s~~~~g~~~s~~~l~~~~~~-~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 239 (440)
+.++.+.....+..+++.++..+++ ++|+++|| +| ||++++++.++..++.++.+ ++++++.++++|++.|++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~---~G--Rk~~~~~~~~~~~i~~~~~a-~a~~~~~~~~~Rfl~G~~ 184 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR---FG--RKPVLLVSLLLFIIFGILTA-FAPNYWMFLIFRFLSGFF 184 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh---cc--cHHHHHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhh
Confidence 4467788888889999999999965 66999999 56 99999999999999888877 899999999999999999
Q ss_pred HHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhheeecccc
Q 013568 240 VAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQ 319 (440)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~ 319 (440)
.+.......+++.|+.+++.|+.+..+ ..... .++.+++..++++.. +||+.+++..+..++.++.+++.+|++
T Consensus 185 ~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~---~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~ 258 (521)
T KOG0255|consen 185 GSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFF---VGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESP 258 (521)
T ss_pred ccchhHHhHhhheeecCcchhhHHHHH-HHHHH---HHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcCh
Confidence 999999999999999999999998888 55555 788899999998887 899999999998888777777777887
Q ss_pred ccCCCcCCCCC----------C--CCCccchhhHHH--H-----------HHHHHHhcCcchhhhHHHHHhhhcc-cccc
Q 013568 320 VLGPSRRQNLP----------L--GDPSFFESSKQN--M-----------FQLWEAVKQPNVFLPTLFVFLWQAT-PHSD 373 (440)
Q Consensus 320 ~~~~~~~~~~~----------~--~~~~~~~~~~~~--~-----------~~~~~~l~~~~~~~~~l~~~~~~~~-~~~~ 373 (440)
+....+.+.++ . ++....+..... . .....+++.|++....++..+.... ....
T Consensus 259 rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y 338 (521)
T KOG0255|consen 259 RWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVY 338 (521)
T ss_pred HHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHH
Confidence 64222111100 0 000000000000 0 0123344444333333322221110 0000
Q ss_pred ceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhhhh
Q 013568 374 SAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMTQV 437 (440)
Q Consensus 374 ~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~~l 437 (440)
....+ ....+|.+. .......+.....+....+...++.|||.....+.++..+..+...
T Consensus 339 ~gl~~-~~~~lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~ 398 (521)
T KOG0255|consen 339 YGLSL-NVSGLGGNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFG 398 (521)
T ss_pred Hhhhh-hhhhcCchH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 00001 112334332 3344444456777777778889999999988888777666655443
No 107
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.58 E-value=4.8e-13 Score=133.26 Aligned_cols=171 Identities=18% Similarity=0.162 Sum_probs=124.3
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.++...+...+. +.....++.|+++++|++..+.+.+.+.+.....+ .+++|+++||+ .| ||+.++++.++
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRi--lG--rrr~iliG~il 85 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKV--LG--NRMAVMLGALL 85 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cC--cHHHHHHHHHH
Confidence 455555555655555 56777899999888999999999998888877666 66889999994 36 77777788777
Q ss_pred HHHHHHHHHhhhc-hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhccc--ccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 212 GALSWSLMATIVE-SKYSAALSILLGSLSVAFSDVVVDSMVVERARGE--SQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 212 ~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
..++.++++ ... +...+.+...+.++|.+...+...+++.|.+|++ +|..+.++.. ...++|+.++|.+.+++
T Consensus 86 ~~lg~lll~-~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y---~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 86 MAIGHVVLG-ASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMY---AAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHH-HhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHH---HHHHHHHHHHHHHHHHH
Confidence 777766555 322 2223344444555666766677788999999876 4665555544 44559999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHHhh
Q 013568 289 VDAYGVRFVFGVTALLPLITSGVA 312 (440)
Q Consensus 289 ~~~~gw~~~f~i~~~~~~~~~~~~ 312 (440)
.+.+||++.|.+.++..+++++.+
T Consensus 162 ~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 162 QEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HhhhChHHHHHHHHHHHHHHHHHH
Confidence 999999999999776555544433
No 108
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.58 E-value=5.8e-13 Score=132.85 Aligned_cols=255 Identities=21% Similarity=0.271 Sum_probs=168.2
Q ss_pred HHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhh-chhHHHHHHHHHHHHHHHhhhhhhh
Q 013568 171 AVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIV-ESKYSAALSILLGSLSVAFSDVVVD 248 (440)
Q Consensus 171 g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~ 248 (440)
++..++..+..++ .|+.|.++|+ .| +||+++.+...+..++..++.+.. ++++...+..++..++.+......+
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~---~~-~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADY---GG-RRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc---cc-cchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555 8899999997 34 777777777777777766666443 3444455666777788888999999
Q ss_pred HHHHhhhcccccc--c---------------------chhhhHHhhhhhhhHHHHHHHHHHHhhh--------ccchHHH
Q 013568 249 SMVVERARGESQS--V---------------------SGSLQSLCWGSSAFGGIVSSYFSGSMVD--------AYGVRFV 297 (440)
Q Consensus 249 ~~~~~~~~~~~r~--~---------------------~~~~~~~~~~~~~~g~~ig~~i~g~l~~--------~~gw~~~ 297 (440)
+++.|+.+++++- . ...+.+.++..+++|+++.-++.-.+.. ..+-|..
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~ 228 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA 228 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence 9999999998771 0 0245556667677888887776665532 1235888
Q ss_pred HHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhcccc-ccce
Q 013568 298 FGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPH-SDSA 375 (440)
Q Consensus 298 f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~ 375 (440)
+.+.++..++..+ ..+++||.+.++...... .......++..+.+++..+.|.+..+++..++|.-... ....
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~-----~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~ 303 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPGPRPLPSGS-----SYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISF 303 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCCCcch-----hHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877666655 556777776532111110 00112223333344445566777777666666554222 2222
Q ss_pred eeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCch--hHHHHHHHHHHHHhh
Q 013568 376 MFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLR--KIFLANTIFGTALGM 434 (440)
Q Consensus 376 ~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r--~~l~~~~~~~~~~~~ 434 (440)
...|..+++|++..+...+.....+..++|.++++++.||+|.| +.++.+.++..++.+
T Consensus 304 ~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 304 AGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 23444578999999999999999999999999999999999998 777776666544443
No 109
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.54 E-value=4.7e-17 Score=163.12 Aligned_cols=255 Identities=16% Similarity=0.250 Sum_probs=167.2
Q ss_pred hhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhc---hhHHHHHHHHHHHHHHHhhh
Q 013568 169 ETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVE---SKYSAALSILLGSLSVAFSD 244 (440)
Q Consensus 169 ~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~ 244 (440)
+.+++.+...++..+ .+++|.++|| +| ||+.++++.++..++.++.+ +++ +...+.++|++.|++.|...
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~---~G--Rk~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADR---YG--RKPALIISALLMIIGSILIA-FAPSYNNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccc---cc--cccccccccccccccccccc-cccccccccccccccccccccccccc
Confidence 467788888888888 6788999999 56 77888888888888887777 677 88999999999999999999
Q ss_pred hhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc---cchHHHHHHHHHHHHHHHHhheeecccccc
Q 013568 245 VVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA---YGVRFVFGVTALLPLITSGVAVLVKEQQVL 321 (440)
Q Consensus 245 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~---~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~ 321 (440)
+....++.|..|++.|++...+.+..+. +|.+++..++-.+... .+||+.+++.++..++..+..+++||+|+.
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~---~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~w 197 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWA---LGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRW 197 (451)
T ss_pred cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccce
Confidence 9999999999999999999998888877 8888877766544332 459999999998887777777899999865
Q ss_pred CCCcCCCC-------CCCCCc----cchhhHHHH-------HHHHHHhcCcc----hhhhHHHHHhhhccccccceeeee
Q 013568 322 GPSRRQNL-------PLGDPS----FFESSKQNM-------FQLWEAVKQPN----VFLPTLFVFLWQATPHSDSAMFYF 379 (440)
Q Consensus 322 ~~~~~~~~-------~~~~~~----~~~~~~~~~-------~~~~~~l~~~~----~~~~~l~~~~~~~~~~~~~~~~~~ 379 (440)
-..+.+.+ +.++++ ..++..+.. ....++++++. +...+....+.... +.....++
T Consensus 198 L~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~--g~~~~~~~ 275 (451)
T PF00083_consen 198 LLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFS--GINFIFYY 275 (451)
T ss_pred ecccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccc--cccccccc
Confidence 22111110 000000 000000000 11223344432 11111111111111 11112222
Q ss_pred ee---ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhhh
Q 013568 380 TT---NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMTQ 436 (440)
Q Consensus 380 ~~---~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~~ 436 (440)
.. +..|.+.. -.......+..+++.+++.++.||+|||++++.+..+++++.+..
T Consensus 276 ~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~ 333 (451)
T PF00083_consen 276 SPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLIL 333 (451)
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 21 44565555 223344555666777777899999999999988877766655443
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.53 E-value=8.4e-14 Score=132.16 Aligned_cols=196 Identities=13% Similarity=0.098 Sum_probs=143.5
Q ss_pred hhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc----------
Q 013568 222 IVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA---------- 291 (440)
Q Consensus 222 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~---------- 291 (440)
...++...++..++.|.|.+...+..+.+++++.++|++++++.+.+.+++ +|.++||++++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~---~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNK---LGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhh---hHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 346788889999999999999999999999999999999999999998988 9999999999987731
Q ss_pred ------cchHHHHHHHHHHHHHHHHhheee--ccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHH
Q 013568 292 ------YGVRFVFGVTALLPLITSGVAVLV--KEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFV 363 (440)
Q Consensus 292 ------~gw~~~f~i~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 363 (440)
..|+++|++.+++.++..+.+.+. ||.+.+ +.++... ++. .+.++.+++|.++...+..
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~--~~~~~~~----------~~~-~~~~~~~~~~~~~l~~~~~ 149 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEA--DVARVSS----------GDT-TQKTSAFQFTHLVLGALGI 149 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcc--ccccccc----------ccc-cchhhHHhhHHHHHHHHHH
Confidence 479999997776655555544443 442221 1111000 000 0112356677777777777
Q ss_pred Hhhhcccccccee-eeeee--ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHh
Q 013568 364 FLWQATPHSDSAM-FYFTT--NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 364 ~~~~~~~~~~~~~-~~~~~--~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~ 433 (440)
++|...+.....+ ..|.. +.+|+++.+.+.......++.++|+++++++.||++.|+.+.++.+++++..
T Consensus 150 f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~ 222 (310)
T TIGR01272 150 FVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLS 222 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 7777644333333 23333 2479999999999999999999999999999999999998877766655544
No 111
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.51 E-value=1.4e-13 Score=129.82 Aligned_cols=177 Identities=16% Similarity=0.099 Sum_probs=145.2
Q ss_pred ccCCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhh
Q 013568 129 VDLSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLV 206 (440)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~ 206 (440)
...++.+|.+++.++...+. ..+..|.|.|+.|..|+|...+++..+++-++... ..++||+|||+ +++||.+.-+
T Consensus 248 VL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDkl--fkgrR~p~~~ 325 (448)
T COG2271 248 VLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKL--FKGRRGPMAL 325 (448)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh--cccccchHHH
Confidence 34567789999999888876 78888999999999999999999999999998888 55779999997 6437777777
Q ss_pred HHHHHHHHHHHHHHhhhch--hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhh-HHHHHHH
Q 013568 207 LSGLLGALSWSLMATIVES--KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAF-GGIVSSY 283 (440)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-g~~ig~~ 283 (440)
+..++..++.+... ..++ .....++.++.|+..-...........|..|++.-|.+.++.+.+.. + |...+..
T Consensus 326 i~~~~i~~~~~~~w-~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Y---l~Ga~~a~~ 401 (448)
T COG2271 326 IFMLLITASLVLYW-LAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAY---LIGAALAGL 401 (448)
T ss_pred HHHHHHHHHHHHHH-cCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHH---HhhHHhcCC
Confidence 77777766665555 4443 46677888888988888778888899999999999999988876655 6 8888888
Q ss_pred HHHHhhhccchHHHHHHHHHHHHHHHHh
Q 013568 284 FSGSMVDAYGVRFVFGVTALLPLITSGV 311 (440)
Q Consensus 284 i~g~l~~~~gw~~~f~i~~~~~~~~~~~ 311 (440)
..|++.+.+||...|++..+.++++.++
T Consensus 402 ~~g~i~d~~gW~g~Fi~~~~~a~l~~ll 429 (448)
T COG2271 402 PLGYIADTWGWDGGFIVLSIAALLAILL 429 (448)
T ss_pred cceeeEecCCCcchHHHHHHHHHHHHHH
Confidence 8999989899999999888777766553
No 112
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.47 E-value=4.7e-12 Score=124.67 Aligned_cols=159 Identities=14% Similarity=0.195 Sum_probs=119.5
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
..+..++|.|+++++|++..+.+++.+...+...+ .+++|+++|| +| ||+.+..+.+...+....+. ..++.+
T Consensus 233 ~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr---~g--~~~~~~~~~~~~~~~~~~~~-~~~~~~ 306 (393)
T PRK15011 233 SLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR---LG--KRFLMRVAAVAGVCFYAGML-MAHSPA 306 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--hHHHHHHHHHHHHHHHHHHH-HHhhHH
Confidence 44556788899888999999999887766555555 6788999999 45 55555555444444433333 455666
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
..++.+++.+++.+...+....+..|..|+ +++++.++++.... +|..+|+.++|++.+++||+..|++.+++.++
T Consensus 307 ~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~---lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~ 382 (393)
T PRK15011 307 ILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSR---VGWIIAGSLAGIVAEIWNYHAVFWFALVMIIA 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 667777888887777666777788898875 47888888776655 99999999999999999999999998888888
Q ss_pred HHHhheeecc
Q 013568 308 TSGVAVLVKE 317 (440)
Q Consensus 308 ~~~~~~~~~e 317 (440)
.++..+++||
T Consensus 383 ~~~~~~~~~~ 392 (393)
T PRK15011 383 TLFCLLRIKD 392 (393)
T ss_pred HHHHHHhhcC
Confidence 7777776664
No 113
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.47 E-value=1.1e-11 Score=119.90 Aligned_cols=178 Identities=17% Similarity=0.218 Sum_probs=140.5
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcC----CChhhhHHHHHhh-hhhHHHHhhhhhhccccCcCCCCcchhhhH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLH----LDPAETAVISGFS-SLPWLIKPLYGFISDSLPLFGYRRRSYLVL 207 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g----~s~~~~g~~~s~~-~l~~~~~~~~g~l~Dr~~~~G~~rr~~l~~ 207 (440)
.++.+...-+..-++ +.+...+..|+..+++ +|.+++.-+++.+ .+.|....++||++||+ +| +|+.+++
T Consensus 22 ~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~--LG--~~~tI~l 97 (498)
T COG3104 22 GLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRV--LG--TRRTIVL 97 (498)
T ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHh--cc--hhHHHHH
Confidence 566667666766666 5666677777776667 9998877666665 46666667889999997 88 6677888
Q ss_pred HHHHHHHHHHHHHhhh-chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 208 SGLLGALSWSLMATIV-ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 208 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
+.++++++.++++... .....+.+...+.++|.|..-+....++.|.+|+++.- +-+-++..+.+.|+|++++|++.+
T Consensus 98 Gail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiGsl~~p~i~~ 176 (498)
T COG3104 98 GAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIGSLIAPIITG 176 (498)
T ss_pred HHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehHHHHHHHHHH
Confidence 8899999999888332 45677788888888999999999999999999886532 445566666777799999999999
Q ss_pred HhhhccchHHHHHHHHHHHHHHHHhheeec
Q 013568 287 SMVDAYGVRFVFGVTALLPLITSGVAVLVK 316 (440)
Q Consensus 287 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 316 (440)
++.+++||+..|.+.++-..++++.+++.+
T Consensus 177 ~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 177 LLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999988888777665544
No 114
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.45 E-value=2.3e-12 Score=118.99 Aligned_cols=162 Identities=14% Similarity=0.143 Sum_probs=129.2
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
......+.+-+....|.+..+..++......++.+ ...||..+|+ .| ||+-..+......+..++-+ ..+++.
T Consensus 94 ~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~---~g--rr~~f~~T~l~t~v~~~is~-~spnf~ 167 (528)
T KOG0253|consen 94 MMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT---IG--RRKGFNLTFLVTGVFGVISG-ASPNFA 167 (528)
T ss_pred HHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh---hh--cchhhhhhHHHHHHHHHhhc-CCCCee
Confidence 45555566667777888999999999999999988 6799999999 46 45445555445545544445 678999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.+.+.|.+.|+|.|. .+...++-.|..|..+|..-+-+. ..+. +|.++...+.-.++.++||||.....+....+
T Consensus 168 ~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~wa---ig~v~ea~law~vm~~~gwr~~l~~~~~pl~~ 242 (528)
T KOG0253|consen 168 SLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWA---IGQVFEALLAWGVMSNFGWRYLLFTSSTPLMF 242 (528)
T ss_pred hhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHH---HHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHH
Confidence 999999999999999 778888899999999988776655 6667 99999999998888999999999888876666
Q ss_pred HHHhheeecccccc
Q 013568 308 TSGVAVLVKEQQVL 321 (440)
Q Consensus 308 ~~~~~~~~~e~~~~ 321 (440)
.+...++++|+++.
T Consensus 243 ~a~f~~w~~ESpRf 256 (528)
T KOG0253|consen 243 AARFLVWVYESPRF 256 (528)
T ss_pred HHHHHhhcccCcch
Confidence 77778889998753
No 115
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.44 E-value=2.4e-12 Score=129.72 Aligned_cols=177 Identities=15% Similarity=0.123 Sum_probs=122.8
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.++.+|.+++.+++.... .....++|.|+++++|++..+.++..++..++..+ .+++|+++||+ | +||. ++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~---g-~r~~-~~~~ 330 (467)
T PRK09556 256 KNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA---N-GRRA-LVAC 330 (467)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C-CCch-HHHH
Confidence 345677777776665554 45677899999988999999999988888888777 78899999994 5 4443 3333
Q ss_pred HHHHHHHHHHHH-hhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhh-HHHHHHHHHH
Q 013568 209 GLLGALSWSLMA-TIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAF-GGIVSSYFSG 286 (440)
Q Consensus 209 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-g~~ig~~i~g 286 (440)
..+..++...+. ...++...+.+++++.|++.............|.+|++.++.+.++.+.... + |..++|.+.|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~---l~g~~~~~~~~G 407 (467)
T PRK09556 331 IALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAY---LFGDSFAKVGLG 407 (467)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHH---HHhHHHHhhhHH
Confidence 222222221111 1234554555666777755433333344667799999999998888765544 5 7799999999
Q ss_pred Hhhh------------ccchHHHHHHHHHHHHHHHHhheee
Q 013568 287 SMVD------------AYGVRFVFGVTALLPLITSGVAVLV 315 (440)
Q Consensus 287 ~l~~------------~~gw~~~f~i~~~~~~~~~~~~~~~ 315 (440)
++.+ ..||+..|++.+++.+++++..+++
T Consensus 408 ~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 408 MIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 5789999999887777766654433
No 116
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.44 E-value=4e-13 Score=127.57 Aligned_cols=177 Identities=13% Similarity=0.130 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHhcC-------CChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhH
Q 013568 137 AVAMVYFVQGVL-GLARLAVNFYLKDDLH-------LDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVL 207 (440)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~l~~~l~~~~g-------~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~ 207 (440)
+..+++|..+++ ..+....+.+-.-++| ++....+.+..+..++.++ |.++|++.|+ +| ||.++..
T Consensus 45 iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~---~G--RK~vYG~ 119 (538)
T KOG0252|consen 45 IAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDK---FG--RKKVYGK 119 (538)
T ss_pred HhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhh---hc--chhhhhH
Confidence 344555566665 3333333333233333 3455667777778888888 8899999999 56 8888888
Q ss_pred HHHHHHHHHHHHHhhhc-------hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHH
Q 013568 208 SGLLGALSWSLMATIVE-------SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIV 280 (440)
Q Consensus 208 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~i 280 (440)
.++++.++.++++ ++. -..++.+.|++.|+|.|.-+|...+..+|....+.||...+..-.+.+ .|...
T Consensus 120 ~liImIi~t~~~~-~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg---~Gila 195 (538)
T KOG0252|consen 120 ELIIMIICSALSG-LSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQG---FGILA 195 (538)
T ss_pred HHHHHHHHHHHhc-cCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecc---hhHhh
Confidence 8888888887655 431 135678999999999999999999999999999999988776655555 55555
Q ss_pred HHHHHHHhh---hc------------cchHHHHHHHHHHHHHHHHhheeeccccccC
Q 013568 281 SSYFSGSMV---DA------------YGVRFVFGVTALLPLITSGVAVLVKEQQVLG 322 (440)
Q Consensus 281 g~~i~g~l~---~~------------~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~ 322 (440)
|.+++-.+. ++ .=||..|.+.++.+++.+...+.+||+++..
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYT 252 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHH
Confidence 544444332 11 1299999998888887777788899987643
No 117
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.43 E-value=7.4e-12 Score=118.50 Aligned_cols=270 Identities=19% Similarity=0.207 Sum_probs=178.8
Q ss_pred HHHHHHHHhcCC---Chh----hhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhc-
Q 013568 154 AVNFYLKDDLHL---DPA----ETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVE- 224 (440)
Q Consensus 154 ~l~~~l~~~~g~---s~~----~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~- 224 (440)
..|+|+++..+. ++. ..+...++..+..++ .|+.|.++|. .| .||+.+-+...+..++.+++.+..+
T Consensus 37 ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~---~g-~Rk~~~~~f~~i~i~~~~~L~~i~~~ 112 (438)
T COG2270 37 IFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADY---PG-PRKKFFGFFTAIGIISTFLLWFIPPG 112 (438)
T ss_pred hhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhcc---CC-CcchHHHHHHHHHHHHHHHHHHhCCC
Confidence 445555554333 332 344455555555444 8999999998 56 7888887777777777777774555
Q ss_pred -hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH--hh------------
Q 013568 225 -SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS--MV------------ 289 (440)
Q Consensus 225 -~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~--l~------------ 289 (440)
..+..++...+..++.....+..++++.++.++++-++. .+.++..+++|+.+.-++.-. +.
T Consensus 113 s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~ri---S~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~ 189 (438)
T COG2270 113 SYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRI---SGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLG 189 (438)
T ss_pred chHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcc---cccccccccccchHHHHHHHHHHhcccccceeEEeec
Confidence 344556677888888889999999999999999877755 345566666777665544311 11
Q ss_pred ----hccchHHHHHHHHHHHHHHHH-hheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHH
Q 013568 290 ----DAYGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVF 364 (440)
Q Consensus 290 ----~~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 364 (440)
+...-|..+.+.++..++..+ .++..++.+....+.. +...+..++.+..+++..+++.+..+++.-+
T Consensus 190 l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~-------~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~ 262 (438)
T COG2270 190 LPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPP-------TALRNGFKELKSTFKEIRGRKNLVLFLIARF 262 (438)
T ss_pred cCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccch-------HHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 122357888888877777666 4556665543221110 1111234455555666667777777776666
Q ss_pred hhhcccccccee-eeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhhhh
Q 013568 365 LWQATPHSDSAM-FYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMTQV 437 (440)
Q Consensus 365 ~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~~l 437 (440)
+|+-.......+ -.|....+|++..+..++.....+..++|++++|++.+|+|.|++++.+.++..+.++..+
T Consensus 263 ~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~ 336 (438)
T COG2270 263 FYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI 336 (438)
T ss_pred HHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH
Confidence 665522111111 2333358999999999999999999999999999999999999998888877776665443
No 118
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.43 E-value=1.3e-11 Score=120.30 Aligned_cols=159 Identities=15% Similarity=0.220 Sum_probs=118.4
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
......+|.++++++|.+..+.+++.+...+.... .++.|+++|| +| ||+.+..+.++..+....+. ..++.+
T Consensus 216 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r---~g--~~~~~~~~~~~~~~~~~~~~-~~~~~~ 289 (375)
T TIGR00899 216 ILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR---FG--KRRLMLLAALAGVAFYTGLA-ADNSLW 289 (375)
T ss_pred HHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH---hc--chhHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 34455678888887899999999877665544444 6788999999 45 56666665554444443333 445666
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.+++..++.|++.+...+....+..|..|++ ++.+.++++.... +|..++|.++|.+.+..||+..|++.+++.++
T Consensus 290 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~ 365 (375)
T TIGR00899 290 ALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGR---VGWIIAGSVGGILAERWSYHAVYWFAIVMLIV 365 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHH---HHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 6677778888888887778888888988764 5567777766655 99999999999999999999999999988887
Q ss_pred HHHhheeecc
Q 013568 308 TSGVAVLVKE 317 (440)
Q Consensus 308 ~~~~~~~~~e 317 (440)
..+..++++|
T Consensus 366 ~~~~~~~~~~ 375 (375)
T TIGR00899 366 ALFCLLLIKD 375 (375)
T ss_pred HHHHHheecC
Confidence 7776666654
No 119
>PTZ00207 hypothetical protein; Provisional
Probab=99.42 E-value=2.1e-11 Score=123.63 Aligned_cols=154 Identities=16% Similarity=0.109 Sum_probs=117.4
Q ss_pred HHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhh------chhH
Q 013568 154 AVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIV------ESKY 227 (440)
Q Consensus 154 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~------~~~~ 227 (440)
...+.+++++|++..+.+++.++......++++.|+++|| +| +|++++++.++..++.++++ ++ .+.+
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr---~G--~R~vllig~ll~~iG~ll~a-la~~~~i~~s~~ 121 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDY---LG--PRPIFVLSMTVFCLGTLLFA-LTFQEVIEGSVV 121 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--cHHHHHHHHHHHHHHHHHHH-HHhcccccCcHH
Confidence 4444567779999999999876633222237788999999 45 88899999999988888877 44 5788
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHH-HHHHHHHhhhccchHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIV-SSYFSGSMVDAYGVRFVFGVTALLPL 306 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~i-g~~i~g~l~~~~gw~~~f~i~~~~~~ 306 (440)
.+.+.|++.|++.+...+.....+.+++| ++||++.++...+.+ +|.++ +++..+++. .+|++.|++.+++.+
T Consensus 122 ~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~g---LGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~ 195 (591)
T PTZ00207 122 RLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTG---LGSAILGSIQLAFFS--DNTSAYFFFLMSFAL 195 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHH---HHHHHHHHHHHHHHH--HhHHHHHHHHHHHHH
Confidence 88999999999999888888889999986 678999999888877 88865 555555443 468888888888777
Q ss_pred HHHH-hheeecccc
Q 013568 307 ITSG-VAVLVKEQQ 319 (440)
Q Consensus 307 ~~~~-~~~~~~e~~ 319 (440)
+..+ ..+++++++
T Consensus 196 vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 196 VVGILAIVFMRLPP 209 (591)
T ss_pred HHHHHHHhheeCCc
Confidence 6655 344555543
No 120
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.41 E-value=8.2e-12 Score=124.59 Aligned_cols=178 Identities=16% Similarity=0.131 Sum_probs=116.9
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.++.+.+.++..... .....++|.|+++++|++..+.++..+++.++..+ .++.|+++||+ .+.+|+.......
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~--~~~~r~~~~~~~~ 319 (434)
T PRK11663 242 NPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKL--FNGNRGPMNLIFA 319 (434)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHh--ccCCccHHHHHHH
Confidence 34566665555554444 45667899999887899999999988888888777 77889999995 2212333322221
Q ss_pred HHHHHHHHHHHhh-hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 210 LLGALSWSLMATI-VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 210 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
+...+..+.+... ..+.....+..+..|++.............|.+++++|+...++.+.... +|.+++|.+.|++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~g~~~~p~~~g~l 396 (434)
T PRK11663 320 AGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAY---LGAALSGYPLAKV 396 (434)
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHH---HHHHHhcccHHHH
Confidence 1111111111111 12222233333444443332233344567899999999999888887776 9999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHHhhee
Q 013568 289 VDAYGVRFVFGVTALLPLITSGVAVL 314 (440)
Q Consensus 289 ~~~~gw~~~f~i~~~~~~~~~~~~~~ 314 (440)
.+++||+..|++.+++.++..+..++
T Consensus 397 ~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 397 LEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888777664443
No 121
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.40 E-value=5.4e-12 Score=125.39 Aligned_cols=158 Identities=13% Similarity=0.119 Sum_probs=118.0
Q ss_pred HHHHHHHHHh---cCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHH
Q 013568 153 LAVNFYLKDD---LHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYS 228 (440)
Q Consensus 153 ~~l~~~l~~~---~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 228 (440)
...+.++.+. .+.+..+.|++.++..+...+ .+++|+++|| +| +|+.+..+.++..+...++. +.++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr---~g--~~~~~~~~~~l~~~~~~l~~-~~~~~~~ 317 (420)
T PRK09528 244 QQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR---IG--AKNALLLAGTIMAVRIIGSG-FATGPLE 317 (420)
T ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--cchhhHHHHHHHHHHHHHHH-hcccHHH
Confidence 3455555543 256777888888888877766 7888999999 45 56666666666666666666 5677777
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhh-hHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 229 AALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSL-QSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 229 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
+++++++.|++.+...+....++.+..|++.++...+. ++.... +|.++++.+.|++.+.+||+..|.+.+++.++
T Consensus 318 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~---lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i 394 (420)
T PRK09528 318 VSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQ---LGAVFLSTLAGNLYDSIGFQGTYLILGGIVLL 394 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHH---HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHH
Confidence 78888999998888777788899999998888766443 444445 99999999999999999999999998887766
Q ss_pred HHHhh-eeecccc
Q 013568 308 TSGVA-VLVKEQQ 319 (440)
Q Consensus 308 ~~~~~-~~~~e~~ 319 (440)
..++. +++++++
T Consensus 395 ~~~~~~~~~~~~~ 407 (420)
T PRK09528 395 FTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHhcCCc
Confidence 65543 3444433
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.39 E-value=9.2e-12 Score=123.47 Aligned_cols=177 Identities=16% Similarity=0.210 Sum_probs=127.3
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCCh--------hhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcch
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDP--------AETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRS 203 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~--------~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~ 203 (440)
+++.+.+..++.... .......+.++++ .|.+. ...+.+.++..+...+ .++.|+++|| +| ||+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr---~g--~r~ 282 (418)
T TIGR00889 209 RMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR---FG--IKK 282 (418)
T ss_pred CeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH---hC--cHH
Confidence 444444444443332 3444556777766 46543 5567777777777666 7788999999 45 777
Q ss_pred hhhHHHHHHHHHHHHHHhhhc---hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhH-HhhhhhhhHHH
Q 013568 204 YLVLSGLLGALSWSLMATIVE---SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQS-LCWGSSAFGGI 279 (440)
Q Consensus 204 ~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~~g~~ 279 (440)
.+..+.++..++...+..... +...+++..++.|++.+...+....++.|.+|+++|++..++.+ ..+. +|.+
T Consensus 283 ~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~---lg~~ 359 (418)
T TIGR00889 283 VMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNG---FGSL 359 (418)
T ss_pred HHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHh---hHHH
Confidence 888887777776655552222 23455677889999998888888899999999999999988886 4566 8999
Q ss_pred HHHHHHHHhhhc------cchHHHHHHHHHHHHHHHH-hheeecccc
Q 013568 280 VSSYFSGSMVDA------YGVRFVFGVTALLPLITSG-VAVLVKEQQ 319 (440)
Q Consensus 280 ig~~i~g~l~~~------~gw~~~f~i~~~~~~~~~~-~~~~~~e~~ 319 (440)
+||.++|++.++ +||+.+|.+.+++.++..+ ..++++|+.
T Consensus 360 iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 360 LGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999887 4699999998887777665 455667653
No 123
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.37 E-value=1.6e-11 Score=119.46 Aligned_cols=167 Identities=16% Similarity=0.164 Sum_probs=122.6
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
+.++.+...++..... .......+++.++ +|.+..+.+++.++..++..+ .++.|+++||+ | ||+.+..+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~---g--~~~~~~~~~~ 278 (377)
T TIGR00890 205 PQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI---G--RQKTMSIVFG 278 (377)
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h--hhhhhhHHHH
Confidence 3455555545444443 2334455666655 799998899888888888777 78889999994 4 6666767766
Q ss_pred HHHHHHHHHHhhhchh--HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 211 LGALSWSLMATIVESK--YSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 211 ~~~~~~~~~~~~~~~~--~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
+..++.+.+. ..++. ...++..++.+++.+...+....++.|.+|+++|++..++.+.... +|..++|.+.|.+
T Consensus 279 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~g~~~~~~~~g~l 354 (377)
T TIGR00890 279 ISAVGMAAML-FIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKA---VAGIFGGLIASHA 354 (377)
T ss_pred HHHHHHHHHH-HcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHH---HHHHHHHHHHHHH
Confidence 6666655555 33322 2233456677777777777778899999999999999998887777 9999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHH
Q 013568 289 VDAYGVRFVFGVTALLPLITS 309 (440)
Q Consensus 289 ~~~~gw~~~f~i~~~~~~~~~ 309 (440)
.+..||++.|.+.+++.++++
T Consensus 355 ~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 355 LTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HhhhchhhHHHHHHHHHHHhc
Confidence 999999999999887766543
No 124
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.37 E-value=3.5e-11 Score=117.97 Aligned_cols=171 Identities=14% Similarity=0.127 Sum_probs=134.2
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.+++++.+.+..++.... .....+.+.++++ +|.+..++|++.++..+...+ .++.+.+.|| +| .|+.+.++
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r---~g--~~~~l~~~ 276 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQN---CS--ARDLLLIS 276 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh---CC--HHHHHHHH
Confidence 345666655555544443 5666688899987 799999999987776666666 5677899998 45 77778888
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhH-HhhhhhhhHHHHHHHHHHH
Q 013568 209 GLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQS-LCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~~g~~ig~~i~g~ 287 (440)
.+...+.+..++ ..++.+.+++..++.|+..+...+....++.+. |++++++..++++ ...+ +|..+|+.++|+
T Consensus 277 ~~~~~~~~~~~~-~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g---~g~~~g~~~~G~ 351 (382)
T TIGR00902 277 AIACVGRWAIIG-AIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMG---GLIAIFTAFAGF 351 (382)
T ss_pred HHHHHHHHHHHH-hHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 888888887777 678888888889999999999999999999988 8888887788775 4556 999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHHHHhhe
Q 013568 288 MVDAYGVRFVFGVTALLPLITSGVAV 313 (440)
Q Consensus 288 l~~~~gw~~~f~i~~~~~~~~~~~~~ 313 (440)
+.+++|+ ..|++.+++.++++++..
T Consensus 352 l~~~~g~-~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 352 IYPTLGA-GTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred HHHhccH-HHHHHHHHHHHHHHHHHH
Confidence 9999986 668887777776655443
No 125
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.36 E-value=5.3e-10 Score=104.66 Aligned_cols=255 Identities=15% Similarity=0.070 Sum_probs=150.0
Q ss_pred HhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHH
Q 013568 161 DDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLS 239 (440)
Q Consensus 161 ~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 239 (440)
+++|++..+++.+.........+ +++.|.++|| +| ||+..++..++..++++.- ..+++..+++.|++.|++
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~---~G--rk~~cl~~cily~~scl~k--~~~~~~~L~~GRvlgGia 134 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR---YG--RKKACLLFCILYSLSCLTK--HSSNYPVLLLGRVLGGIA 134 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--chHHHHHHHHHHHHHHHHH--hccccHHHHHHHHHHHHH
Confidence 34899999999887776666655 9999999999 56 5555555555666665433 458899999999999999
Q ss_pred HHhhhhhhhHHH-Hhhhccccc-ccchhhhHHhhhhhh-hHHHHHHHHHHHhhhccc--hHHHHHHHHHHHHHHHHhh-e
Q 013568 240 VAFSDVVVDSMV-VERARGESQ-SVSGSLQSLCWGSSA-FGGIVSSYFSGSMVDAYG--VRFVFGVTALLPLITSGVA-V 313 (440)
Q Consensus 240 ~~~~~~~~~~~~-~~~~~~~~r-~~~~~~~~~~~~~~~-~g~~ig~~i~g~l~~~~g--w~~~f~i~~~~~~~~~~~~-~ 313 (440)
.+....+.-+++ .|....+.. ......+..+....| +-.+++.+++-++++..| -..+|....++.+++.++. .
T Consensus 135 TSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 135 TSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHh
Confidence 999888888865 444222111 111222222211111 334445555555565554 4778888777776666644 4
Q ss_pred eeccccccCCCcCCCCCCCCCccchhhHHHHHH-HHHHhcCcchhhhHHHHHhhhcc-ccccceeeeeeeccCCCChhhH
Q 013568 314 LVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQ-LWEAVKQPNVFLPTLFVFLWQAT-PHSDSAMFYFTTNELGFTPEFL 391 (440)
Q Consensus 314 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~ 391 (440)
..+|+........ +.....++ ...+++||+++.+.+.-.++-.. +.+...+.... +..+ ...-.
T Consensus 215 ~W~ENyg~~~~~~------------~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL-~~~~-~~~P~ 280 (354)
T PF05631_consen 215 TWPENYGDTSSSS------------SLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPAL-DPDD-EELPL 280 (354)
T ss_pred cccccCCCccccc------------chHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeecee-cCCC-CCCCc
Confidence 5666643221111 12223333 33455789988877665554441 11111111111 2111 22346
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cCCchhHHHHHHHHHHHHhhhh
Q 013568 392 GRVKFVTSVASLLGVGLYNGFLK-NVPLRKIFLANTIFGTALGMTQ 436 (440)
Q Consensus 392 g~~~~~~~i~~~~g~~~~~~l~~-r~g~r~~l~~~~~~~~~~~~~~ 436 (440)
|+++..+.++.++|+.+..++.. +......+.....+.++...+.
T Consensus 281 GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~~l~~p 326 (354)
T PF05631_consen 281 GLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAVSLAIP 326 (354)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987664 4444455544444444443333
No 126
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.36 E-value=1.1e-11 Score=129.35 Aligned_cols=135 Identities=13% Similarity=0.058 Sum_probs=106.3
Q ss_pred hhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhh
Q 013568 176 FSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVER 254 (440)
Q Consensus 176 ~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 254 (440)
+..++..+ .++.|+++|| +| ||+.++++.++.+++.++++ +.++...+++++++.+++.+...+...++++|+
T Consensus 603 l~~l~~i~G~il~g~L~Dr---~G--Rr~~l~~~~~lsai~~ll~~-~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 603 LGTLAVLPGNIVSALLMDK---IG--RLRMLAGSMVLSCISCFFLS-FGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHH---hC--CHHHHHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555 5688999999 45 78888888888888777766 556666677777888888888888899999999
Q ss_pred hcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhheeeccccc
Q 013568 255 ARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQV 320 (440)
Q Consensus 255 ~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~ 320 (440)
+|.+.|+++.++...... +|.++||++++.+.+. +...+|++.+++.+++.++.+++||++.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~r---lGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCK---AAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred cCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 999999999888887776 9999999999988764 4667788888777777676667787654
No 127
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.36 E-value=4.4e-11 Score=121.27 Aligned_cols=164 Identities=14% Similarity=0.097 Sum_probs=116.7
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHH-HHh-hhch
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSL-MAT-IVES 225 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~-~~~-~~~~ 225 (440)
.....++|.++++.+|++..+.+++.....++..+ .++.|+++|| +| ||+.++.+.++..++.+. +.. ..++
T Consensus 267 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (490)
T PRK10642 267 YMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR---FG--RRPFVILGSVALFVLAIPAFILINSNV 341 (490)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--cHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45666899999887899988877777677777666 7788999999 45 666666655433322222 211 2334
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhh-hHHhhhhhhhHHHHHHHHHHHhhhcc-chHHHHHHHHH
Q 013568 226 KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSL-QSLCWGSSAFGGIVSSYFSGSMVDAY-GVRFVFGVTAL 303 (440)
Q Consensus 226 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~~~~g~~ig~~i~g~l~~~~-gw~~~f~i~~~ 303 (440)
...+++++++.|++.+........++.|++|++.|+.+.++ ++.+. +++.++|.+.+++.+.. +|+..+++..+
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~----~~g~~~p~i~g~l~~~~~~~~~~~~~~~~ 417 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISV----LVAGLTPTLAAWLVESTQNLMMPAYYLMV 417 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 55667778888887777667778888999999999987775 44433 56788999999888755 47777777776
Q ss_pred HHHHHHHhheeecccccc
Q 013568 304 LPLITSGVAVLVKEQQVL 321 (440)
Q Consensus 304 ~~~~~~~~~~~~~e~~~~ 321 (440)
.+++.++..+++||++..
T Consensus 418 ~~~i~~~~~~~~pes~~~ 435 (490)
T PRK10642 418 VAVIGLITGVTMKETANR 435 (490)
T ss_pred HHHHHHHHHHHhccccCC
Confidence 666666666677998764
No 128
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.35 E-value=9.6e-11 Score=111.63 Aligned_cols=262 Identities=13% Similarity=0.068 Sum_probs=159.2
Q ss_pred HHHHHhhhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHh
Q 013568 143 FVQGVLGLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMAT 221 (440)
Q Consensus 143 ~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~ 221 (440)
+.+++..+....+..+.++.|| +...+-|...++.+.+.. +..+-|+.|+ +| -|...+++..+..++..+=..
T Consensus 55 ~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk---~G--LR~a~llgt~ln~iGa~Ir~i 128 (480)
T KOG2563|consen 55 FSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK---FG--LRTALLLGTVLNGIGAWIRLI 128 (480)
T ss_pred hcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc---cc--hHHHHHHHHHHHHHHHHHhhh
Confidence 3344445666677778888888 666677777778777766 8888999999 56 566666666666666544331
Q ss_pred hhc-----hhH--HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc---
Q 013568 222 IVE-----SKY--SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA--- 291 (440)
Q Consensus 222 ~~~-----~~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~--- 291 (440)
... .++ ....+-.+.+.+.-+....-.-+..-|+++++|..+..+-.+++- +|..+|.++...++.+
T Consensus 129 ss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~---LGvavg~llppilV~~~~~ 205 (480)
T KOG2563|consen 129 SSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNP---LGVAVGFLLPPILVPSSKD 205 (480)
T ss_pred ccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcch---HHHHHHhhccceecCCCCC
Confidence 222 222 334555555555555555555667779999999998888777777 7888877777766643
Q ss_pred ---cchHH--HHHHHHHHHHHHHHh-heeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHh
Q 013568 292 ---YGVRF--VFGVTALLPLITSGV-AVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFL 365 (440)
Q Consensus 292 ---~gw~~--~f~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 365 (440)
..|.. .|+..+++..+.++. .+..+++|+.++...+.. +......+.+++.++|+++....+ +
T Consensus 206 ~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~--------~~~~~f~~si~~~~~n~~F~il~~---~ 274 (480)
T KOG2563|consen 206 SEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAA--------LQDASFPKSIKSCFKNRQFIILAI---C 274 (480)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhh--------hhcCcHHHHHHHHHcCccHHHHHH---H
Confidence 34654 355455544444332 233334333222221110 011235567888899988655432 2
Q ss_pred hhccccccceeeeeee---ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHH
Q 013568 366 WQATPHSDSAMFYFTT---NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLA 424 (440)
Q Consensus 366 ~~~~~~~~~~~~~~~~---~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~ 424 (440)
|.+..+.....+..+. ..-|++....|+......+++++|+.+.|.+.||.++-+....
T Consensus 275 ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~ 336 (480)
T KOG2563|consen 275 YGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTL 336 (480)
T ss_pred HhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 2221111112211111 2345666788999999999999999999999999876444333
No 129
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.35 E-value=4.8e-11 Score=118.46 Aligned_cols=163 Identities=14% Similarity=0.096 Sum_probs=126.2
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
.....++|.|+++.+|.+..+.|++.+...++..+ .++.+++.||. ++++.+..+.++..++.+.+. ..++..
T Consensus 240 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-----~~~~~l~~~~~~~~~~~~~~~-~~~~~~ 313 (417)
T PRK10489 240 SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-----RPGLLMLLSTLGSFLAVGLFG-LMPMWI 313 (417)
T ss_pred HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-----CcchHHHHHHHHHHHHHHHHH-ccchHH
Confidence 34455788888887899999999998888888777 67789999972 355566666666666655555 556666
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
...++.++.|++.+...+...+++.|..|++.|++..+++..... +|..+|+.+.|++.+.+|++..+++.+++.++
T Consensus 314 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~---~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~ 390 (417)
T PRK10489 314 LAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNV---TGDAIGAALLGGLGAMMTPVASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh---hhHhHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 667778888888888777888899999999999999998887666 99999999999999999999888887766655
Q ss_pred HHH-hheeeccccc
Q 013568 308 TSG-VAVLVKEQQV 320 (440)
Q Consensus 308 ~~~-~~~~~~e~~~ 320 (440)
..+ ..+.+++.+.
T Consensus 391 ~~~~~~~~~~~~~~ 404 (417)
T PRK10489 391 IGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHHHhcccccc
Confidence 444 4555666543
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.35 E-value=3e-11 Score=116.17 Aligned_cols=169 Identities=25% Similarity=0.344 Sum_probs=138.8
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcch-hhhHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRS-YLVLSGLLGAL 214 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~-~l~~~~~~~~~ 214 (440)
..+..+..... .......+.+.++.+|.+..+.+++.+...++..+ .+++|++.||+ | ||+ .+..+..+..+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~--~~~~~~~~~~~~~~i 254 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL---G--RRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--hhhHHHHHHHHHHHH
Confidence 33334444443 46667788888887799999999998888888877 78889999994 4 666 77777777777
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccch
Q 013568 215 SWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGV 294 (440)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw 294 (440)
+.+.+. ..++.....+..++.|++.+...+....++.|..|+++|++..++.+.... +|..+++.+.|.+.+..+|
T Consensus 255 ~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~i~g~l~~~~~~ 330 (352)
T cd06174 255 GLLLLA-LAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGS---LGGALGPLLAGLLLDTGGY 330 (352)
T ss_pred HHHHHH-HhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcccCc
Confidence 777666 556677788889999999999999999999999999999999999888777 9999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHhheee
Q 013568 295 RFVFGVTALLPLITSGVAVLV 315 (440)
Q Consensus 295 ~~~f~i~~~~~~~~~~~~~~~ 315 (440)
++.|++.+++.++..+..+++
T Consensus 331 ~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 331 GGVFLILAALALLAALLLLLL 351 (352)
T ss_pred chHHHHHHHHHHHHHHHheec
Confidence 999999999888877765543
No 131
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.35 E-value=4.3e-11 Score=121.61 Aligned_cols=275 Identities=12% Similarity=0.074 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHH
Q 013568 135 NFAVAMVYFVQGVLGLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGA 213 (440)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~ 213 (440)
+.++++.++.+++...+......-+++.|+++..+.|++.+.+-++..+ ..+..++.-| ++|-+++-.+.++++
T Consensus 99 l~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-----~HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 99 LVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR-----GHRPRWIGIGLVLMG 173 (735)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc-----cCccceeeechhHHH
Confidence 3356677788888744444444556777999999999999999999887 5577999888 367777888888888
Q ss_pred HHHHHHHhhhc-------------------h---------------------------------hHHHHHHHHHHHHHHH
Q 013568 214 LSWSLMATIVE-------------------S---------------------------------KYSAALSILLGSLSVA 241 (440)
Q Consensus 214 ~~~~~~~~~~~-------------------~---------------------------------~~~~~~~~~l~g~~~~ 241 (440)
++.++.+ +.+ + +..++++.++.|+|..
T Consensus 174 lgsll~a-lPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T 252 (735)
T KOG3626|consen 174 LGSLLFA-LPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT 252 (735)
T ss_pred HHHHHHh-ChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC
Confidence 8877766 320 0 1134566688899999
Q ss_pred hhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc------------------cc-hHHHHHHHH
Q 013568 242 FSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA------------------YG-VRFVFGVTA 302 (440)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~------------------~g-w~~~f~i~~ 302 (440)
...+....++=|-..+++-+...++...+.. +|+++|-++++++... .| |-..|++.+
T Consensus 253 pi~tlGisYiDDnvk~~~SplYlgi~~~~~~---lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g 329 (735)
T KOG3626|consen 253 PIFTLGISYIDDNVKKKNSPLYLGILYSMAI---LGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICG 329 (735)
T ss_pred CCccCCCccccccccccCCcHHHHHHHHHHH---hhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHH
Confidence 9999999999999988887877777776666 9999999999987532 12 666688888
Q ss_pred HHHHHHHHhheeeccccccCCC----cCC----CC---CCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccc-
Q 013568 303 LLPLITSGVAVLVKEQQVLGPS----RRQ----NL---PLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATP- 370 (440)
Q Consensus 303 ~~~~~~~~~~~~~~e~~~~~~~----~~~----~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~- 370 (440)
.+.++..+.++++|.+...... ++. .+ ...+.++.+..++..+.++++++||.+...++...+.....
T Consensus 330 ~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~ 409 (735)
T KOG3626|consen 330 ALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAIT 409 (735)
T ss_pred HHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHh
Confidence 8888888877777765443211 000 00 01122333455666777889999998776665555544422
Q ss_pred cccceeeeeeeccCCCChhhHHHHHHHHHH-HHHHHHHHHHHhhccCCc
Q 013568 371 HSDSAMFYFTTNELGFTPEFLGRVKFVTSV-ASLLGVGLYNGFLKNVPL 418 (440)
Q Consensus 371 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i-~~~~g~~~~~~l~~r~g~ 418 (440)
+....++-|..+++|.++..+..+....++ +..+|.+++|++++|+..
T Consensus 410 G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl 458 (735)
T KOG3626|consen 410 GYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKL 458 (735)
T ss_pred hHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecc
Confidence 123333445557899999999888876666 677899999999998753
No 132
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.34 E-value=7e-12 Score=103.67 Aligned_cols=132 Identities=24% Similarity=0.329 Sum_probs=106.6
Q ss_pred hhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhh
Q 013568 177 SSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERA 255 (440)
Q Consensus 177 ~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 255 (440)
+.++..+ +++.|++.|| +| ||+.+..+..+..++.+.+. ..++.+...+.+++.|++.+...+....++.|..
T Consensus 7 ~~~~~~~~~~~~g~~~d~---~g--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDR---FG--RKPVLLVGLFIFVLSTAMFA-LSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred ehhHHHHHHhhHHHHHhh---cc--hhHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 4455555 7888999999 44 66677777667767666665 5677788888999999999999999999999999
Q ss_pred cccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhhe-eecc
Q 013568 256 RGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAV-LVKE 317 (440)
Q Consensus 256 ~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~-~~~e 317 (440)
|+++|++..++...... +|..+++.+.+.+.+..+|++.|++.+++.++..+..+ +.||
T Consensus 81 ~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 PPEERGVALGLMSAGIA---LGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ChhhhhHHHHHHHHhHH---HHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999998887777 99999999999999989999999998877776665443 4443
No 133
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.34 E-value=2.3e-11 Score=118.89 Aligned_cols=173 Identities=23% Similarity=0.271 Sum_probs=119.1
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
+++++.+.+..+..... .....+.+.++++++|.+..+.+++.+...++..+ .++.|+++||+ | +|+..+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~-~~~~~~~~~~ 289 (399)
T TIGR00893 214 DRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL---L-RRGKSLVFAR 289 (399)
T ss_pred CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH---h-hcccchhHHH
Confidence 34566666666665555 56777889999888899999999988888887776 78889999994 4 3432222211
Q ss_pred HHHHHH-----HHHHHh-hhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHH
Q 013568 210 LLGALS-----WSLMAT-IVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSY 283 (440)
Q Consensus 210 ~~~~~~-----~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~ 283 (440)
....++ ...... ..++....+....+.+++.+ ..+....++.|..|+++|++..++.+.... +|..++|.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~g~~~~~~ 365 (399)
T TIGR00893 290 KTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGN---LGGIVGPI 365 (399)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHH---HhhhhhhH
Confidence 111111 111110 11233333333334444444 677889999999999999999988887777 99999999
Q ss_pred HHHHhhhccc-hHHHHHHHHHHHHHHHHhh
Q 013568 284 FSGSMVDAYG-VRFVFGVTALLPLITSGVA 312 (440)
Q Consensus 284 i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~ 312 (440)
+.|++.+..| |++.|++.+++.++..+..
T Consensus 366 i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 366 VIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9999999888 9999999888777665543
No 134
>PRK03699 putative transporter; Provisional
Probab=99.34 E-value=4.5e-11 Score=117.72 Aligned_cols=173 Identities=9% Similarity=0.078 Sum_probs=122.1
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.++.+.+.+++.... .....++|.|+++++|++..+.+++.+++.++..+ .++.|+++||+ | +|+.+.....+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~---~--~~~~l~~~~~~ 280 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF---D--LQRILTVLAGL 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh---c--hhhHHHHHHHH
Confidence 455555555554444 45667999999888999999999998888888777 67889999994 4 55555555444
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc
Q 013568 212 GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA 291 (440)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~ 291 (440)
..+...++. ..++...+.+..++.|++.+...+...++..+..+.+ ++...+..... +++|..++|.+.|++.+.
T Consensus 281 ~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~---~~~g~~i~p~~~G~l~~~ 355 (394)
T PRK03699 281 ALVLMYLFV-NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTC---GTIGTMLTFVVTSPIVAH 355 (394)
T ss_pred HHHHHHHHH-HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHh---hhHHHHHHHHHHHHHHHH
Confidence 444444443 4455555566667788877777677777777766543 34444444433 349999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHhheeec
Q 013568 292 YGVRFVFGVTALLPLITSGVAVLVK 316 (440)
Q Consensus 292 ~gw~~~f~i~~~~~~~~~~~~~~~~ 316 (440)
.||+..|++.+++.++..+....++
T Consensus 356 ~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 356 FGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred hCchhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999998888777766444444
No 135
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.33 E-value=3.7e-11 Score=117.66 Aligned_cols=164 Identities=21% Similarity=0.174 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
++......+..... .....++|.++++++|.+..+.+.+.+...++..+ .++.|+++|| +| ||+.+.....+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~g--~~~~~~~~~~~~ 295 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR---IG--RRPVLIIFTVLA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--hHHHHHHHHHHH
Confidence 44444444444444 45667889999877899999999888888777776 7889999999 45 455444333222
Q ss_pred -HHHHHHHHhh--hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhh-hHHhhhhhhhHHHHHHHHHHHh
Q 013568 213 -ALSWSLMATI--VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSL-QSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 213 -~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~~~~g~~ig~~i~g~l 288 (440)
..+...+... .++.+...+..++.|++.+...+...+++.|.+|+++|+++.++ ++.... +|..++|.++|++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~g~~~~p~~~g~l 372 (394)
T TIGR00883 296 ALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGA---IFGGFAPYIAAAL 372 (394)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHH---HHhhHHHHHHHHH
Confidence 2221122112 23455556667888888888888899999999999999988886 344444 8889999999999
Q ss_pred hhccc-hHHHHHHHHHHHH
Q 013568 289 VDAYG-VRFVFGVTALLPL 306 (440)
Q Consensus 289 ~~~~g-w~~~f~i~~~~~~ 306 (440)
.++.| |++.++...+..+
T Consensus 373 ~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 373 VAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHcCcchhHHHHHHHHHH
Confidence 99888 8888777665544
No 136
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.33 E-value=3.5e-11 Score=118.88 Aligned_cols=168 Identities=14% Similarity=0.073 Sum_probs=121.7
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
+...++..... .....++|.++++ .|.+..+.+++.+...++..+ .++.|+++||+ | ||+.+..+.+...++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~---g--~~~~~~~~~~~~~~~ 298 (406)
T PRK11551 225 LWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL---R--PRRVVLLIYAGILAS 298 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH---h--HHHHHHHHHHHHHHH
Confidence 33333333333 4555678888887 699999999998888888777 77889999994 4 566665555555555
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc-ch
Q 013568 216 WSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY-GV 294 (440)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~-gw 294 (440)
...+. ..++...+.+..++.|++.+...+...++..|.+|+++|++..++.+.... +|..+||.++|++.++. +|
T Consensus 299 ~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~---~g~~~g~~~~g~l~~~~~~~ 374 (406)
T PRK11551 299 LAALA-AAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGR---LGSMAGPLLAGQLLALGRST 374 (406)
T ss_pred HHHHH-hcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhh---HHHHHHhhhHhhhhccCCch
Confidence 44444 445555566666778887777778888999999999999999998887777 99999999999998765 46
Q ss_pred HHHHHHHHHHHHHHHHhheee
Q 013568 295 RFVFGVTALLPLITSGVAVLV 315 (440)
Q Consensus 295 ~~~f~i~~~~~~~~~~~~~~~ 315 (440)
...+++.+.+.++..+..+++
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 375 VGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 666766666655555544433
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.32 E-value=7.3e-11 Score=116.60 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=116.2
Q ss_pred hhHHHHHHHHHHHhcCCChhh----hHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhh
Q 013568 149 GLARLAVNFYLKDDLHLDPAE----TAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIV 223 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~----~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~ 223 (440)
+.....++.|+.+..+ +..+ .+.+.++..++..+ .+++|+++||+ | ||+.+..+..+..++.+.+. ..
T Consensus 236 ~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~---g--~~~~~~~~~~~~~~~~~~~~-~~ 308 (408)
T PRK09874 236 GSIAPILTLYVRELAG-NVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI---G--PEKILITALIFSVLLLIPMS-FV 308 (408)
T ss_pred HHHHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---c--cchhHHHHHHHHHHHHHHHH-Hh
Confidence 4455567777776433 3222 34444455555555 67889999994 4 66666666666555555544 44
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHH
Q 013568 224 ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTAL 303 (440)
Q Consensus 224 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~ 303 (440)
++.+.+++.+++.|++.+...+.....+.+..+++++++..++++.... +|..+||.++|++.+..||++.|++.++
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~g~~~gp~~~G~l~~~~g~~~~f~~~~~ 385 (408)
T PRK09874 309 QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRD---IGNVTGPLMGAAISANYGFRAVFLVTAG 385 (408)
T ss_pred ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHH---HHHHhhHHHHHHHHhhcchhHHHHHHHH
Confidence 5666777788899999998888888888899999999999888887766 9999999999999999999999999998
Q ss_pred HHHHHHHhhee
Q 013568 304 LPLITSGVAVL 314 (440)
Q Consensus 304 ~~~~~~~~~~~ 314 (440)
+.++..+..++
T Consensus 386 ~~l~~~~~~~~ 396 (408)
T PRK09874 386 VVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHHHH
Confidence 88777665443
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.32 E-value=9e-11 Score=115.41 Aligned_cols=153 Identities=12% Similarity=0.085 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHH
Q 013568 151 ARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSA 229 (440)
Q Consensus 151 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 229 (440)
...++++++++.+|.+..+.+++.+...++..+ .++.|+++||+ | ||... .+..+..++...+....++.+.+
T Consensus 224 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~---~--~~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 297 (390)
T PRK03545 224 AYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH---P--SGFLL-IAIALLLVCLLLLLPAANSEWHL 297 (390)
T ss_pred HHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc---c--hhHHH-HHHHHHHHHHHHHHHHhchHHHH
Confidence 445677888887899999999988888877776 77889999993 4 55443 33333333333333245566666
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHH
Q 013568 230 ALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITS 309 (440)
Q Consensus 230 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~ 309 (440)
+++.++.|++.+...+.....+.+..| +.++++.++++.... +|..+||.++|++.+++|++..|++.+++.++++
T Consensus 298 ~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~---~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~ 373 (390)
T PRK03545 298 SVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFN---IGIGAGALLGNQVSLHLGLSSIGYVGAALALAAL 373 (390)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHH---HHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHH
Confidence 777788888887766677778888766 577887887776666 9999999999999999999999999998887776
Q ss_pred Hhhe
Q 013568 310 GVAV 313 (440)
Q Consensus 310 ~~~~ 313 (440)
+...
T Consensus 374 ~~~~ 377 (390)
T PRK03545 374 VWSI 377 (390)
T ss_pred HHHH
Confidence 6443
No 139
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.31 E-value=6.3e-11 Score=118.89 Aligned_cols=175 Identities=14% Similarity=0.031 Sum_probs=114.1
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcch-hhhHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRS-YLVLS 208 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~-~l~~~ 208 (440)
++.+|.+.+..++.... .....++|.|+++++|++..+.+++..++.++..+ .++.|+++||+ +.+||. ..+..
T Consensus 252 ~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~---~~~r~~~~~~~~ 328 (452)
T PRK11273 252 NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV---FRGNRGATGVFF 328 (452)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccCCcchHHHHH
Confidence 44566655555544443 45667999999988899999999888777777766 77889999994 212333 22222
Q ss_pred HHHHHHHHHHHHhh-hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHH-HHHHHHH
Q 013568 209 GLLGALSWSLMATI-VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGI-VSSYFSG 286 (440)
Q Consensus 209 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~-ig~~i~g 286 (440)
..+..++.+.+... ..+....+++.++.|.+..........+..|.+|++.|+++.++.+.... +|+. ++|.+.|
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~---~g~~~~g~~v~g 405 (452)
T PRK11273 329 MTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGY---LGGSVAASAIVG 405 (452)
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHH---HHHHHhhhhhHH
Confidence 22222222222211 22333333444444544333333344567899999999999988876555 6655 4799999
Q ss_pred HhhhccchHHHHHHHHHHHHHHHHhh
Q 013568 287 SMVDAYGVRFVFGVTALLPLITSGVA 312 (440)
Q Consensus 287 ~l~~~~gw~~~f~i~~~~~~~~~~~~ 312 (440)
++.++.||+..|++.+++++++++..
T Consensus 406 ~l~~~~g~~~~f~~~~~~~~~~~~~~ 431 (452)
T PRK11273 406 YTVDFFGWDGGFMVMIGGSILAVILL 431 (452)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999888777766543
No 140
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.31 E-value=1.9e-11 Score=122.66 Aligned_cols=172 Identities=14% Similarity=0.125 Sum_probs=125.7
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhh-hHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYL-VLS 208 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l-~~~ 208 (440)
++.++.+.+..+...+. .....++++|+++ +|.+..+.+++.++..++..+ +++.|+++||.. .+ +|+..+ ..+
T Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~-~~-~~~~~~~~~~ 316 (455)
T TIGR00892 240 HRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKW-IR-PHVQYLFSFA 316 (455)
T ss_pred CchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cC-HHHHHHHHHH
Confidence 34555555544444444 3445678888877 799999999998888887776 889999999731 11 122222 223
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 209 GLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
.++..++.+.+. ..++.+.+++.+++.|++.+...+...+++.|.+|++++++..++++.... +|.++||.++|++
T Consensus 317 ~~~~~l~~ll~~-~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---lg~~igp~i~G~l 392 (455)
T TIGR00892 317 LLFNGLTHLLCA-LAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVEC---CAVLIGPPLAGRL 392 (455)
T ss_pred HHHHHHHHHHHH-HhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHH---HHHHccccceeee
Confidence 333333333333 456777778888999999998888899999999999999999888887777 9999999999999
Q ss_pred hhcc-chHHHHHHHHHHHHHHHH
Q 013568 289 VDAY-GVRFVFGVTALLPLITSG 310 (440)
Q Consensus 289 ~~~~-gw~~~f~i~~~~~~~~~~ 310 (440)
.+.. +|++.|++.+++.++..+
T Consensus 393 ~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 393 VDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred ehhcCCcchHHHHhhHHHHHHHH
Confidence 9877 599999998876665544
No 141
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.30 E-value=8.7e-11 Score=115.82 Aligned_cols=158 Identities=16% Similarity=0.206 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
+....+++.++.+ .|.+ ..++..+.+.++..+ .++.|++.||+ | +|+.+..+..+..++.+++. ..++.+
T Consensus 233 ~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~---~--~~~~~~~~~~~~~~~~~~~~-~~~~~~ 303 (399)
T PRK05122 233 GTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL---G--GLRVAIVSLLVEILGLLLLW-LAPSPW 303 (399)
T ss_pred HHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh---c--cHHHHHHHHHHHHHHHHHHH-HhccHH
Confidence 3444566777766 4663 445555666677666 67889999993 4 66667666666666666655 456666
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
..++..++.|++.+...+.......|..|+++|++..++++.... +|..+++.+.|++.+..||++.|++.+++.++
T Consensus 304 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 380 (399)
T PRK05122 304 MALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLD---LSLGITGPLAGLVASWFGYPSIFLAAALAALL 380 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 677778899999988877777888899999999999998887777 89999999999999999999999998888777
Q ss_pred HHHhheeeccc
Q 013568 308 TSGVAVLVKEQ 318 (440)
Q Consensus 308 ~~~~~~~~~e~ 318 (440)
.++..++++++
T Consensus 381 ~~~~~~~~~~~ 391 (399)
T PRK05122 381 GLALTWLLYRR 391 (399)
T ss_pred HHHHHHHhccc
Confidence 76655544443
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.30 E-value=1.2e-10 Score=114.07 Aligned_cols=154 Identities=14% Similarity=0.121 Sum_probs=112.2
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
.....++|.|+++ .|.+..+.+++.++..++..+ +.+.|+++||+ | +|+.+..+..+..++.+.+. . ..
T Consensus 217 ~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~---~--~~~~l~~~~~~~~~~~~~~~---~-~~ 286 (381)
T PRK03633 217 GSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF---G--RLLVLRVQVFVVILGSIAML---S-QA 286 (381)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc---C--cHHHHHHHHHHHHHHHHHHh---h-hH
Confidence 3445567888877 699999999888877777776 77889999994 4 66666666655555443322 1 22
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
....+.++.|++.....+...+.+.|..|+++++...+.+...+. +|..+||.++|++.+++||++.|.+.+.+.++
T Consensus 287 ~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 287 AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYT---VGSLLGPSFTAMLMQNYSDNLLFIMIASVSFI 363 (381)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 333456667777666677888888898888776656566655555 99999999999999999999999998887766
Q ss_pred HHHhheee
Q 013568 308 TSGVAVLV 315 (440)
Q Consensus 308 ~~~~~~~~ 315 (440)
..+..++.
T Consensus 364 ~~~~~~~~ 371 (381)
T PRK03633 364 YLLMLLRK 371 (381)
T ss_pred HHHHHHhc
Confidence 65544443
No 143
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.28 E-value=9.1e-13 Score=117.41 Aligned_cols=289 Identities=16% Similarity=0.119 Sum_probs=176.2
Q ss_pred CccHHHHHHHHH---HHHHhhhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhH
Q 013568 132 SPDNFAVAMVYF---VQGVLGLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVL 207 (440)
Q Consensus 132 ~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~ 207 (440)
.+|+.++.+.++ ...+++=...++..+.+.+.++..++..++.+++..+..+ ..++|++.||. +| -|-..++.
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~--fg-ir~gtii~ 116 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRR--FG-IRLGTIIL 116 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhh--hh-hhHHHHHH
Confidence 335555444443 3333444455677777777888889999999999999888 66789999994 77 33333333
Q ss_pred HHHHHHHHHHHH--HhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH
Q 013568 208 SGLLGALSWSLM--ATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 208 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~ 285 (440)
+.+ ..++.+++ +...+.++++.+.|++.|+|.-...++-+.+..-++..++.+...+++..... +|..+--.+.
T Consensus 117 ~~f-v~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR---~GstvNf~lm 192 (459)
T KOG4686|consen 117 CIF-VFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVAR---LGSTVNFLLM 192 (459)
T ss_pred HHH-HHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHH---hhceeeeeec
Confidence 332 22333322 23457899999999999999988888899999999999999999998887777 7877776777
Q ss_pred HHhhhccc------------hHHHHHH-HHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhc
Q 013568 286 GSMVDAYG------------VRFVFGV-TALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVK 352 (440)
Q Consensus 286 g~l~~~~g------------w~~~f~i-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 352 (440)
+++.+..+ --.+|-. .....++.+...-+ -+++.++...+++.... |. .++.+.+ -.
T Consensus 193 ~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~-~D~rAerilh~e~g~~G-----e~--pkLtdv~--~f 262 (459)
T KOG4686|consen 193 PFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGL-SDDRAERILHLEEGFLG-----EE--PKLTDVN--TF 262 (459)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHhhhcCccc-----CC--ccccccc--cc
Confidence 77765432 1111111 11111122111112 12211110000000000 00 0000100 12
Q ss_pred CcchhhhHHHHHhhhcccc-ccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 353 QPNVFLPTLFVFLWQATPH-SDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 353 ~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
.|.+|.+.+..++|..... +...-..++.+.+|+|+..++.+.+..-....+...+.|.++||.|++...+.+..+..+
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl 342 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTL 342 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHH
Confidence 4678887776666554221 111223444578999999998888766666667778899999999998888777766666
Q ss_pred Hhhhhh
Q 013568 432 LGMTQV 437 (440)
Q Consensus 432 ~~~~~l 437 (440)
.+-..+
T Consensus 343 ~~H~~l 348 (459)
T KOG4686|consen 343 LGHSGL 348 (459)
T ss_pred HHhhhH
Confidence 554433
No 144
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.28 E-value=2.4e-10 Score=112.83 Aligned_cols=174 Identities=14% Similarity=0.128 Sum_probs=121.0
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.++...+.+++.... .....++|.|+++ +|++..+.+++.+...++..+ .++.|+++||+ | +||.....+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~---~-~~~~~~~~~~ 295 (402)
T TIGR00897 221 NPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL---G-WMNTVRWFGG 295 (402)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh---c-chhHHHHHHH
Confidence 44566666666655554 4556688888876 799999999888888887777 78889999994 5 4444333333
Q ss_pred HHHHHHHHHHHhh----hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH
Q 013568 210 LLGALSWSLMATI----VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 210 ~~~~~~~~~~~~~----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~ 285 (440)
+...++.+.+... .++.+..+++.++.|++.+...+ ....+.|..| ++|++..++.+.... +|..++|.++
T Consensus 296 l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~---lg~~~gp~i~ 370 (402)
T TIGR00897 296 VGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAG---LSAFLAPAIA 370 (402)
T ss_pred HHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHH---HHHHHHHHHH
Confidence 3333322222211 23445556667777877776543 4456667654 578988888887777 9999999999
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHhheee
Q 013568 286 GSMVDAYGVRFVFGVTALLPLITSGVAVLV 315 (440)
Q Consensus 286 g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~ 315 (440)
|.+.+.+||...|++.+++.++..+..+|+
T Consensus 371 g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 371 VLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998887776655554
No 145
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.25 E-value=1.5e-10 Score=107.39 Aligned_cols=264 Identities=18% Similarity=0.180 Sum_probs=167.7
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhcccc--CcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSL--PLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~--~~~G~~rr~~l~~~~~ 210 (440)
.++.+.+.|..||+- +... .+|..++. -|+|.+..+. ++...-++.+..+|+++.|.+ +++| |||.+++-+..
T Consensus 32 ~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~-fS~ay~P~sLKllWaPiVDs~y~k~~G-rrksWvvp~q~ 107 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAI-FSFAYWPFSLKLLWAPIVDSVYSKRFG-RRKSWVVPCQY 107 (510)
T ss_pred hHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhh-hhhhhhHHHHHHHHHhhhHHHHHHhhc-cccceeeehHH
Confidence 577889999999997 6665 88888886 4999998885 567778888899999999943 3478 89988887777
Q ss_pred HHHHHHHHHHhhhc----------hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHH
Q 013568 211 LGALSWSLMATIVE----------SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIV 280 (440)
Q Consensus 211 ~~~~~~~~~~~~~~----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~i 280 (440)
+.......++...+ +...+....++..+..+.++.++.++.-.+..+++.|.+....+.+.. .|.++
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~---~GyfL 184 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQT---AGYFL 184 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHh---hhHHh
Confidence 76666555553332 122234456788899999999999999999999999988777766555 55555
Q ss_pred HHHHHHHhhh-----c--cch---------HHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCCCCccchhhHHHH
Q 013568 281 SSYFSGSMVD-----A--YGV---------RFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLGDPSFFESSKQNM 344 (440)
Q Consensus 281 g~~i~g~l~~-----~--~gw---------~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (440)
|..+.-.+.. . .+| ....+..+.+..+.-.+..+.++++.....++.. ...++..
T Consensus 185 ~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~---------~~i~~~y 255 (510)
T KOG3574|consen 185 GNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELE---------LGIHESY 255 (510)
T ss_pred hcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhh---------cCHHHHH
Confidence 5433322211 0 011 1112223333333333333334433322111100 2445667
Q ss_pred HHHHHHhcCcchhhhHHHHHhhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhh
Q 013568 345 FQLWEAVKQPNVFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFL 413 (440)
Q Consensus 345 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~ 413 (440)
+-++++++-|.+...+.+...+-..+....+.+..-.-+.|++..+.+++..+.....++.....|++.
T Consensus 256 k~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~t 324 (510)
T KOG3574|consen 256 KLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWT 324 (510)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeec
Confidence 778888888887777766666555433444443332247799888877766554445555555555554
No 146
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.23 E-value=1.9e-10 Score=111.98 Aligned_cols=160 Identities=17% Similarity=0.180 Sum_probs=110.4
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.++.+.+.++..... .....+.|.++++.+|.+..+.+++.+...++..+ .++.|+++||. .+ +||..+....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~--~~-~~~~~~~~~~ 291 (379)
T TIGR00881 215 NKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKL--FN-GRRGPLAVFF 291 (379)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHH--cC-CcchHHHHHH
Confidence 34566666665555554 56667889999888899999999988888887777 77889999983 22 2333322221
Q ss_pred -HHHHHHHHHHHhh--hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 210 -LLGALSWSLMATI--VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 210 -~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
....++..... . ..+.....++.++.|+...........+..|..|++.|+++.++.+.... +|..++|.+.|
T Consensus 292 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~g~~~~~~~~g 367 (379)
T TIGR00881 292 MALIIVSLLVYW-LNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAY---LGGILAGLPLG 367 (379)
T ss_pred HHHHHHHHHHHh-cCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhh---hhhhhhhhhHH
Confidence 22222222222 2 22333444555666665555555667788999999999999998887777 99999999999
Q ss_pred HhhhccchHHHH
Q 013568 287 SMVDAYGVRFVF 298 (440)
Q Consensus 287 ~l~~~~gw~~~f 298 (440)
.+.+++||++.|
T Consensus 368 ~l~~~~g~~~~f 379 (379)
T TIGR00881 368 YLADGFGWAGAF 379 (379)
T ss_pred HHHHhhcccccC
Confidence 999999998764
No 147
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.23 E-value=6.6e-10 Score=109.38 Aligned_cols=177 Identities=8% Similarity=-0.007 Sum_probs=119.9
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
++.+.+.+.++..... .....++|+++++ +|.+..+.|...+++.++..+ .+++|++.||+ | ||+.+..+..
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~---~--~~~~~~~~~~ 278 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ---D--RRKLLMLALV 278 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc---c--chHHHHHHHH
Confidence 3555555555444444 4566788999987 799999999999998888877 77889999993 4 6666666655
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhc-ccccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 211 LGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERAR-GESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
+..++..++.....+...+ ..++.|++.+...+.......+..+ ++++++..++.+.... ++..++|.+.|++.
T Consensus 279 l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~~~~~gp~~~G~l~ 353 (393)
T PRK09705 279 LQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGF---IIAGLAPWFSGVLR 353 (393)
T ss_pred HHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 5555544443233332222 2345677776666666666667765 4566766665554444 89999999999999
Q ss_pred hccc-hHHHHHHHHHHHHHHHHh-heeeccccc
Q 013568 290 DAYG-VRFVFGVTALLPLITSGV-AVLVKEQQV 320 (440)
Q Consensus 290 ~~~g-w~~~f~i~~~~~~~~~~~-~~~~~e~~~ 320 (440)
+..| |...|++.+++.++..+. ..+.||++.
T Consensus 354 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 354 SISGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9886 788888877776666554 445666543
No 148
>PRK09952 shikimate transporter; Provisional
Probab=99.22 E-value=7.2e-10 Score=110.74 Aligned_cols=169 Identities=17% Similarity=0.178 Sum_probs=112.4
Q ss_pred HHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHH
Q 013568 142 YFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLM 219 (440)
Q Consensus 142 ~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~ 219 (440)
.++..+. .....+.+.|+++++|++......+..+..+...+ .+++|+++|| +| ||+.+..+.++..++...+
T Consensus 259 ~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr---~g--rr~~~~~~~~~~~~~~~~~ 333 (438)
T PRK09952 259 RLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR---FG--RRRVYITGALIGTLSAFPF 333 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--chHHHHHHHHHHHHHHHHH
Confidence 3333333 45566888899888899887655444444444444 6788999999 45 5566666555444433222
Q ss_pred Hh-h-h-chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhh-HHhhhhhhhHHHHHHHHHHHhhhcc--c
Q 013568 220 AT-I-V-ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQ-SLCWGSSAFGGIVSSYFSGSMVDAY--G 293 (440)
Q Consensus 220 ~~-~-~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~~~~g~~ig~~i~g~l~~~~--g 293 (440)
.. . . ++...+++..++.+++.+...+..++++.|.+|.+.|+...++. +.+.. +|+.++|.+.+++.+.. +
T Consensus 334 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~---lgg~~~p~i~g~l~~~~~~~ 410 (438)
T PRK09952 334 FMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASV---VGGGFTPFIAAALVTYFGGS 410 (438)
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHH---HHHHHHHHHHHHHHHhcCCC
Confidence 21 1 1 22333344556667887777778899999999999887666653 33333 78999999999998744 4
Q ss_pred hHHHHHHHHHHHHHHHHhheeeccc
Q 013568 294 VRFVFGVTALLPLITSGVAVLVKEQ 318 (440)
Q Consensus 294 w~~~f~i~~~~~~~~~~~~~~~~e~ 318 (440)
|+..+.+.+++.++.++..+.++|+
T Consensus 411 ~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 411 WHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHcccc
Confidence 8888888888877777766666653
No 149
>PRK10504 putative transporter; Provisional
Probab=99.21 E-value=1.2e-09 Score=110.31 Aligned_cols=155 Identities=15% Similarity=0.137 Sum_probs=112.1
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.+.......++.... .......|.|++..+|.+..+.+++.....++..+ .+++|+++|| +| ||+.+..+.
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r---~g--~~~~~~~~~ 334 (471)
T PRK10504 260 TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR---FG--YRRVLVATT 334 (471)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cC--chHHHHHHH
Confidence 33455454545544444 44555677788776899999999887777666655 6889999999 45 666777666
Q ss_pred HHHHHHHHHHHhhh--chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 210 LLGALSWSLMATIV--ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 210 ~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
.+..+...++.... ++...+.+..++.|++.+...+....+..+..|++.++.+.++.++... +|..+|+.++|.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~g~~ig~~i~g~ 411 (471)
T PRK10504 335 LGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQ---LSMSIGVTIAGL 411 (471)
T ss_pred HHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHH---HHHHHHHHHHHH
Confidence 66666555544232 2233334556777888888888888999999999999999999888887 999999999998
Q ss_pred hhhccch
Q 013568 288 MVDAYGV 294 (440)
Q Consensus 288 l~~~~gw 294 (440)
+.+..|+
T Consensus 412 ll~~~g~ 418 (471)
T PRK10504 412 LLGLFGQ 418 (471)
T ss_pred HHHHhhh
Confidence 8776655
No 150
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.20 E-value=3.8e-09 Score=106.99 Aligned_cols=162 Identities=12% Similarity=0.158 Sum_probs=113.1
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHH-hhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHH---HHhhh
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISG-FSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSL---MATIV 223 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s-~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~---~~~~~ 223 (440)
.....+.++|+.+++|++..+++++.. ...++..+ .+++|+++|| +| +|+.+.++.++.+++.++ ++...
T Consensus 239 ~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr---~g--~~~~l~i~~~l~~l~~l~~~~l~~~~ 313 (491)
T PRK11010 239 AFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR---LS--LFRALMIFGILQGVSNAGYWLLSITD 313 (491)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hh--HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344557788877778999999999874 44456666 6788999999 45 444444444433333222 22112
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHH
Q 013568 224 ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTAL 303 (440)
Q Consensus 224 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~ 303 (440)
++...+.+..++..+..+...+...++..++.+++.+++..++.+.... +|.++++.+.|++.+.+||+..|.+.++
T Consensus 314 ~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~---lg~~~~~~~~G~l~~~~G~~~~f~~~~~ 390 (491)
T PRK11010 314 KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSA---VGRVYVGPVAGWFVEAHGWPTFYLFSVA 390 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 3443444455665555666666778888999999888877777766665 9999899999999999999999999988
Q ss_pred HHHHHHHhheeeccc
Q 013568 304 LPLITSGVAVLVKEQ 318 (440)
Q Consensus 304 ~~~~~~~~~~~~~e~ 318 (440)
+.+++++...+++++
T Consensus 391 ~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 391 AAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHhc
Confidence 888877766555554
No 151
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=1.1e-09 Score=104.88 Aligned_cols=174 Identities=17% Similarity=0.115 Sum_probs=130.0
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.+++++......++.... ....+++.+++++..|+|.+.++++...+.++..+ ..+.|.++|| +.|+.+...
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr------~~~~~l~~~ 282 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR------GPRRALIAA 282 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc------cchhHHHHH
Confidence 344566555555444443 45566788899998999999999999999999888 7888999998 355566666
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 209 GLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
..+.++....+....++....++..++.|+.............++ .-++.+..+++++...+. +|..+|..++|.+
T Consensus 283 ~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~n---lgia~GA~lGG~v 358 (394)
T COG2814 283 LLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFN---LGIALGAALGGLV 358 (394)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 666666666666566666666677777777776655555555555 335566777888876666 9999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHHhhee
Q 013568 289 VDAYGVRFVFGVTALLPLITSGVAVL 314 (440)
Q Consensus 289 ~~~~gw~~~f~i~~~~~~~~~~~~~~ 314 (440)
.+++|+....++.+++.++++++.++
T Consensus 359 ~~~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 359 LDALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988887775543
No 152
>PRK12382 putative transporter; Provisional
Probab=99.20 E-value=5.9e-10 Score=109.63 Aligned_cols=152 Identities=15% Similarity=0.180 Sum_probs=116.9
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHH
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYS 228 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 228 (440)
....+.+.++++ .|.+. .++..+.+.++..+ +++.|++.|| +| +|+.+..+..+..++.+++. ..++...
T Consensus 234 ~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r---~g--~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 304 (392)
T PRK12382 234 VIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDR---FG--GVKVAIVSLLVETVGLLLLW-LAPTAWV 304 (392)
T ss_pred HHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHh---cC--CCeehHHHHHHHHHHHHHHH-HcccHHH
Confidence 444566777776 46654 45555555666555 6888999999 45 56666666666666666655 5566666
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHH
Q 013568 229 AALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLIT 308 (440)
Q Consensus 229 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~ 308 (440)
.+++.++.|++.+...+.....+.|.+++++|++..++++.... +|..+||.+.|++.++.||++.|.+.+++.++.
T Consensus 305 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~ 381 (392)
T PRK12382 305 ALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQD---IAYGVSGPLAGMLATSFGYPSVFLAGAISAVLG 381 (392)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 77788889999888878888888999999999999998887777 999999999999999999999999998887776
Q ss_pred HHhhe
Q 013568 309 SGVAV 313 (440)
Q Consensus 309 ~~~~~ 313 (440)
.+..+
T Consensus 382 ~~~~~ 386 (392)
T PRK12382 382 IIVTI 386 (392)
T ss_pred HHHHH
Confidence 66443
No 153
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.20 E-value=1.5e-12 Score=131.70 Aligned_cols=280 Identities=13% Similarity=0.095 Sum_probs=2.8
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
+++..+.+... +.....+.. +++.|+++.++.|++.+.+-++..+ ..+..++.+| ++|-+++-.+.++++++
T Consensus 8 ~~~~~~~q~~~~g~~~~~ltt-iErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-----~hrprwig~g~~~~~~g 81 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTT-IERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-----GHRPRWIGIGALLMGLG 81 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cCCcceeeecHHHHHHH
Confidence 45555666444 444444544 5566999999999999999999888 6677999987 26777777888888887
Q ss_pred HHHHHhhhc----h----------------------------------------------hHHHHHHHHHHHHHHHhhhh
Q 013568 216 WSLMATIVE----S----------------------------------------------KYSAALSILLGSLSVAFSDV 245 (440)
Q Consensus 216 ~~~~~~~~~----~----------------------------------------------~~~~~~~~~l~g~~~~~~~~ 245 (440)
.++++ +++ . +..++++.++.|+|.+...+
T Consensus 82 ~~l~~-lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 82 SLLFA-LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHh-ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 76665 221 0 11345777899999999999
Q ss_pred hhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc---------------------cc-hHHHHHHHHH
Q 013568 246 VVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA---------------------YG-VRFVFGVTAL 303 (440)
Q Consensus 246 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~---------------------~g-w~~~f~i~~~ 303 (440)
...+++=|..+++.-+...++...+.. +|+++|-++++.+... .| |-..|.+.++
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~---lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~ 237 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSI---LGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGI 237 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhh---ccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 999999999999998888888877766 8999998888876521 12 5455666666
Q ss_pred HHHHHHHhheeeccccccC----CC---cC-CCCCCCCC---------ccchhhHHHHHHHHHHhcCcchhhhHHHHHhh
Q 013568 304 LPLITSGVAVLVKEQQVLG----PS---RR-QNLPLGDP---------SFFESSKQNMFQLWEAVKQPNVFLPTLFVFLW 366 (440)
Q Consensus 304 ~~~~~~~~~~~~~e~~~~~----~~---~~-~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 366 (440)
+.++..+..++.|++-+.. +. ++ +......+ ...+..++..+.++++++||.+....+.....
T Consensus 238 ~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~ 317 (539)
T PF03137_consen 238 LLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFE 317 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Confidence 6666666555556433222 00 00 00000000 01123345556677888999876666555444
Q ss_pred hccc-cccceeeeeeeccCCCChhhHHHHHHHHHH-HHHHHHHHHHHhhccCCc--hhHHHHHHH
Q 013568 367 QATP-HSDSAMFYFTTNELGFTPEFLGRVKFVTSV-ASLLGVGLYNGFLKNVPL--RKIFLANTI 427 (440)
Q Consensus 367 ~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i-~~~~g~~~~~~l~~r~g~--r~~l~~~~~ 427 (440)
.... +.....+-|...+++.++.++.++.....+ +.++|.+++|++.+|++. |+.+....+
T Consensus 318 ~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v 382 (539)
T PF03137_consen 318 SFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIV 382 (539)
T ss_dssp -----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHH
Confidence 3322 223333455567899999998888766555 788999999999998753 444444333
No 154
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.20 E-value=5.8e-10 Score=111.43 Aligned_cols=180 Identities=12% Similarity=0.056 Sum_probs=113.9
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.++.+.+..++.... .....++|.|+++..|.+..+.+++.+++.+...+ .++.|+++||+ | ++|+... +.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~---~-~~~~~~~-~~ 324 (438)
T TIGR00712 250 NKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV---F-KGNRGAT-GV 324 (438)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh---c-cCcccHH-HH
Confidence 34555554444444333 45556889999987899999999988888777776 78889999994 3 2332222 21
Q ss_pred HHH---HHHHHHHHhh-hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhH-HHHHHHH
Q 013568 210 LLG---ALSWSLMATI-VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFG-GIVSSYF 284 (440)
Q Consensus 210 ~~~---~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g-~~ig~~i 284 (440)
.+. .++...+... ..+.....+..++.|++.............|.+|+++|+.+.++.+.... +| .++||.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~gg~~~gp~l 401 (438)
T TIGR00712 325 FFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGY---LGGSVAASAI 401 (438)
T ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHH---hhhhhhcchh
Confidence 111 1111111111 12223333334444444322222333567799999999999998875544 66 4689999
Q ss_pred HHHhhhccchHHHHHHHHHHHHHHHH-hheeecccc
Q 013568 285 SGSMVDAYGVRFVFGVTALLPLITSG-VAVLVKEQQ 319 (440)
Q Consensus 285 ~g~l~~~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~ 319 (440)
.|.+.++.||...|++.+++.+++.+ ..++++|++
T Consensus 402 ~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 402 VGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999988777666655 455667664
No 155
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.18 E-value=4.9e-10 Score=112.87 Aligned_cols=184 Identities=13% Similarity=0.045 Sum_probs=115.7
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcch-h--h
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRS-Y--L 205 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~-~--l 205 (440)
.++.+|.+++.+++.... ..+..++|.|+++.+|.+..+.+++.++..++..+ .++.|+++||+.+.+..++. . +
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 259 KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKI 338 (465)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 445677777777777665 56777999999998999999999998887777766 78889999985111100111 1 1
Q ss_pred hHHHHHH--HHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHH
Q 013568 206 VLSGLLG--ALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSY 283 (440)
Q Consensus 206 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~ 283 (440)
..+.... .+..+.......+....+++..+.+.+.+...+.......|..|+ ..|...++.+.... +|++++|.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~---l~~~i~p~ 414 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGF---IGGLIAST 414 (465)
T ss_pred HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHH---HHHHHHHH
Confidence 1111111 111111111122333334444555555555545555556677665 66766666665555 99999999
Q ss_pred HHHHhhhc---cchHHHHHHHHHHHHHHHHhheeeccc
Q 013568 284 FSGSMVDA---YGVRFVFGVTALLPLITSGVAVLVKEQ 318 (440)
Q Consensus 284 i~g~l~~~---~gw~~~f~i~~~~~~~~~~~~~~~~e~ 318 (440)
+.|++.+. .+|+..|++.++..++..+...+....
T Consensus 415 l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~ 452 (465)
T TIGR00894 415 LAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSA 452 (465)
T ss_pred hhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 99988764 348999999988887777655554433
No 156
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=5e-10 Score=106.19 Aligned_cols=175 Identities=19% Similarity=0.156 Sum_probs=127.9
Q ss_pred cCCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhH
Q 013568 130 DLSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVL 207 (440)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~ 207 (440)
..+++.|.+++.|+...-. -.+..++|.|++++||+++.+.|.+...+.+...+ .|++|+++|| +| ++|. ++.
T Consensus 215 ~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR---~G-g~rv-~~~ 289 (417)
T COG2223 215 FSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR---IG-GRRV-TLA 289 (417)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh---cc-chhH-HHH
Confidence 3456889999999876554 46777999999999999999999888877776666 9999999999 45 4554 444
Q ss_pred HHHHHHHHHHHHHhhh------chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHH
Q 013568 208 SGLLGALSWSLMATIV------ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVS 281 (440)
Q Consensus 208 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig 281 (440)
....++++..+..... .+....++..+..++..+.-......++..+++++. |...++.+...+ +|+..-
T Consensus 290 ~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~-G~v~G~vga~G~---lGGf~l 365 (417)
T COG2223 290 VFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKET-GAVTGIVGAIGG---LGGFFL 365 (417)
T ss_pred HHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhh-hHHHHHHHHhcc---ccccch
Confidence 4445555555555233 333444454556666666667777888888887744 555666665555 999999
Q ss_pred HHHHHHhhhccc-hHHHHHHHHHHHHHHHHhhe
Q 013568 282 SYFSGSMVDAYG-VRFVFGVTALLPLITSGVAV 313 (440)
Q Consensus 282 ~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~ 313 (440)
|...|...+..| +..+|++...+.+++.+..+
T Consensus 366 p~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 366 PLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred hHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887 99999999888887777544
No 157
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.17 E-value=6.9e-10 Score=112.70 Aligned_cols=150 Identities=16% Similarity=0.153 Sum_probs=107.0
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhh-chhH
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIV-ESKY 227 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~-~~~~ 227 (440)
.....+|.|+++++|++..+.+++.+...++..+ .++.|+++|| +| ||+.+..+.++..+..+.+.... .+.+
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr---~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW---LG--TRKAYVCSLLISQLLIIPVFAIGGANVW 367 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--chHHHHHHHHHHHHHHHHHhhccccHHH
Confidence 3456789999877899999999999988888777 6788999999 45 55566555544444433332122 2333
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.+.+..++.++......+....++.|.+|+++|++..++...... +|..+||.++|++.+.+||+..+.+.++...+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 368 VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGA---LGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhh---HHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 333444444433333445677788999999999999888876666 99999999999999999999888766544433
No 158
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.17 E-value=1.8e-09 Score=106.46 Aligned_cols=171 Identities=10% Similarity=0.080 Sum_probs=118.7
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhc---CCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhh
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDL---HLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLV 206 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~---g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~ 206 (440)
++.++.+.+..+..... .....+.+.|+++.+ +.+....|.+.++..+...+ .+..|++.|| +| ||+.++
T Consensus 214 ~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r---~g--~~~~l~ 288 (396)
T TIGR00882 214 QRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR---IG--AKNALL 288 (396)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--cchhHH
Confidence 34555444433333322 344456778887754 45566778777776666655 6778999999 45 666777
Q ss_pred HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhh-hHHhhhhhhhHHHHHHHHH
Q 013568 207 LSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSL-QSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~~~~g~~ig~~i~ 285 (440)
++.++..+...+.. ..++.+.++++.++.|++..........+..+..+++.++...+. ++.... +|.++++.++
T Consensus 289 ~~~~l~~l~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~---lg~~~~~~l~ 364 (396)
T TIGR00882 289 IAGTIMSVRIIGSS-FATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQ---LAMIFLSTLA 364 (396)
T ss_pred HHHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHH---HHHHHHHHhH
Confidence 77776666665555 566777777788888888766655555666666676666655444 444445 9999999999
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHh
Q 013568 286 GSMVDAYGVRFVFGVTALLPLITSGV 311 (440)
Q Consensus 286 g~l~~~~gw~~~f~i~~~~~~~~~~~ 311 (440)
|++.+.+||+.+|.+.+++.++..+.
T Consensus 365 G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 365 GNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999998887776553
No 159
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.17 E-value=2.3e-09 Score=105.12 Aligned_cols=167 Identities=16% Similarity=0.147 Sum_probs=119.0
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
+++++.+.+..+..... ......++.|+++ .|.+..+.|.+.++..+...+ +++.|++.|| +| +|+.+..+.
T Consensus 204 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r---~~--~~~~l~~~~ 277 (382)
T PRK11128 204 EPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR---WS--ARDLLLLSA 277 (382)
T ss_pred ChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH---CC--HHHHHHHHH
Confidence 44566555544443333 3455566778866 799999999988877666555 6788999998 44 666777777
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhH-HhhhhhhhHHHHHHHHHHHh
Q 013568 210 LLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQS-LCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~~g~~ig~~i~g~l 288 (440)
+...++.+.+. ..++.+.+++..++.|++.+...+....++.+. +++++++..++.+ .... +|..+||.++|.+
T Consensus 278 ~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~g~~ig~~i~G~l 352 (382)
T PRK11128 278 ICGVVRWGLMG-STTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMG---GSIAIMTVLSGFL 352 (382)
T ss_pred HHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 77777766666 567777778888999999988877888877776 4555566666554 3333 7889999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHH
Q 013568 289 VDAYGVRFVFGVTALLPLITSG 310 (440)
Q Consensus 289 ~~~~gw~~~f~i~~~~~~~~~~ 310 (440)
.+.+|+ ..|+..+++.+++++
T Consensus 353 ~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 353 YQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHhccH-HHHHHHHHHHHHHHH
Confidence 999988 466666666655443
No 160
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.16 E-value=8.5e-10 Score=111.36 Aligned_cols=180 Identities=17% Similarity=0.135 Sum_probs=109.2
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCC-cchhhhH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFGYR-RRSYLVL 207 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~-rr~~l~~ 207 (440)
++++|.+++.++..... .....++|.|+.+++|++..+.+.+.++..++..+ .+++|+++||+ ++.+.+ |+..+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~ 330 (476)
T PLN00028 251 NYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWI 330 (476)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHH
Confidence 44566666655544333 34566788898887899999999988888887777 78899999995 112211 1222222
Q ss_pred HHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 208 SGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
..++..++.+++. ..++....++..++.+++.+.......++..++.| +.++...++.+.+.. +|+++++.+.+
T Consensus 331 ~~~l~~i~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~---lg~~i~~~l~~- 404 (476)
T PLN00028 331 VQTLGGVFCIWLG-RANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGN---VGAVLTQLLFF- 404 (476)
T ss_pred HHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhcccc---HHHHHHHHHHH-
Confidence 3222223223333 33444444555566666666555566666666654 567766666543332 66666655443
Q ss_pred hhhccchHHHHHHHHHHHHHHHHhheeecc
Q 013568 288 MVDAYGVRFVFGVTALLPLITSGVAVLVKE 317 (440)
Q Consensus 288 l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e 317 (440)
.....+|+..|++.+++.+++.++.++++.
T Consensus 405 ~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~ 434 (476)
T PLN00028 405 TGSSYSTETGISLMGVMIIACTLPVAFIHF 434 (476)
T ss_pred hcCCccHhhHHHHHHHHHHHHHHHHHheec
Confidence 112346999999998888777776665543
No 161
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.16 E-value=1.4e-09 Score=106.54 Aligned_cols=181 Identities=17% Similarity=0.141 Sum_probs=123.9
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHH-hcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKD-DLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~-~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
.++...+..+..+.. +++....-+|+++ |.+.+.+..|++.+...++.++ .|.+|+++.|. |+-||| ++.+.+
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~---~~~k~P-li~s~i 110 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT---GSVKKP-LIVSFL 110 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc---CCcccC-HHHHHH
Confidence 345555556666665 4555555566665 3577788899999999999988 89999999983 422555 455556
Q ss_pred HHHHHHHHHH---hhhc-hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 211 LGALSWSLMA---TIVE-SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 211 ~~~~~~~~~~---~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
+.+++.++.. ..++ ..+.++++|++.|+|.+.. ...-+++++....++|.++.+..+.+.. +|.++||.+..
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~v---lg~ilGp~~q~ 186 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFV---LGIILGPTIQL 186 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHH---HHHHHhHHHHH
Confidence 6666655552 2233 5678899999999998765 4788999998888888888777766555 66666666655
Q ss_pred Hhhh----cc---------chHHHHHHHHHHHHHHHH-hheeeccccccC
Q 013568 287 SMVD----AY---------GVRFVFGVTALLPLITSG-VAVLVKEQQVLG 322 (440)
Q Consensus 287 ~l~~----~~---------gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~ 322 (440)
.+.. .+ -+..+-|+++++.++.++ +.++++|.....
T Consensus 187 ~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 187 AFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred HHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 4431 11 134556777777766665 455677776544
No 162
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.15 E-value=5.9e-10 Score=112.02 Aligned_cols=173 Identities=14% Similarity=0.091 Sum_probs=114.9
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
.++.++..... .....+.+.++++ +|.+..+.++......+...+ .+++|+++|| +| ||+.+..+.++..++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~~--~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 289 VVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR---FG--RRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--chHHHHHHHHHHHHH
Confidence 33333333333 3344455555555 799998888887777777666 7788999999 45 666666666655555
Q ss_pred HHHHHhh---h-c------hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH
Q 013568 216 WSLMATI---V-E------SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 216 ~~~~~~~---~-~------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~ 285 (440)
.+++... . + +...+....++.+.......+....++.|.+|+++|+++.++...... +|.+++|.+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---lg~~i~~~~~ 439 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANW---LANFIVGFLF 439 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 4444311 1 1 222222222222222223345666778999999999999888887777 9999999999
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHhh-eeecccc
Q 013568 286 GSMVDAYGVRFVFGVTALLPLITSGVA-VLVKEQQ 319 (440)
Q Consensus 286 g~l~~~~gw~~~f~i~~~~~~~~~~~~-~~~~e~~ 319 (440)
+++.++.||++.|++.++++++.++.. ++.||++
T Consensus 440 ~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 440 PTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 999998999999999888877776644 4566654
No 163
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.13 E-value=3e-09 Score=106.36 Aligned_cols=181 Identities=17% Similarity=0.146 Sum_probs=134.5
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
+......+.+++..-. +.+......|.++++|++..+...+..+..+..++ ..++|++.|| +|.++|+.++.+.+
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r---~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR---FGPKTKRTLLISLI 357 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCchhHHHHHHHH
Confidence 3444455555543333 44455666777878999999988776666666666 6688999999 56222356655554
Q ss_pred HHHHHHHHHHhh--------hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHH
Q 013568 211 LGALSWSLMATI--------VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSS 282 (440)
Q Consensus 211 ~~~~~~~~~~~~--------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~ 282 (440)
+..+..+... + .++.+.+.+.-++.|++.|...+...++.+++.|+++.+...+++.+..- ...++||
T Consensus 358 ~~~~i~~~g~-~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk---~ss~lGP 433 (477)
T PF11700_consen 358 LWIIIPLYGL-FGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGK---ASSWLGP 433 (477)
T ss_pred HHHHHHHHHH-HHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHH---HHHHHHH
Confidence 4433322222 3 45667778888899999999999999999999999999988898887777 9999999
Q ss_pred HHHHHhhhccc-hHHHHHHHHHHHHHHHHhheeeccccc
Q 013568 283 YFSGSMVDAYG-VRFVFGVTALLPLITSGVAVLVKEQQV 320 (440)
Q Consensus 283 ~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~~~~e~~~ 320 (440)
++.|.+.+..| -|+.+....++.++++++.++++.++.
T Consensus 434 ll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 434 LLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhh
Confidence 99999998886 889999888888888887777777654
No 164
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.13 E-value=6.2e-09 Score=103.10 Aligned_cols=231 Identities=16% Similarity=0.143 Sum_probs=149.1
Q ss_pred HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHH--HHhhhhhhhHHHHhhhcccccc
Q 013568 184 KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLS--VAFSDVVVDSMVVERARGESQS 261 (440)
Q Consensus 184 ~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~--~~~~~~~~~~~~~~~~~~~~r~ 261 (440)
.|+.|.++|| +| ||..+........+...++. +.. ++..+ +.++. .+.......++++|....++|.
T Consensus 79 s~~iG~lSD~---~g--rk~~L~~~~~~~~l~~~~~~-~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 79 SPLIGALSDR---YG--RKVVLLLPLFGTILPALCLL-FQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred HhhhHHhhhh---hh--hhhhHHHHHHHHHHhHHHHH-HHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHH
Confidence 7899999999 45 88888887777766655555 222 22222 22222 2334557788999999999999
Q ss_pred cchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH-hheeeccccccCCCcC-CCCC-CCCCccch
Q 013568 262 VSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSG-VAVLVKEQQVLGPSRR-QNLP-LGDPSFFE 338 (440)
Q Consensus 262 ~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~~~~~-~~~~-~~~~~~~~ 338 (440)
.+.++.+..+. .+..++|.+++.+.+..|.-.+|++..+..++..+ ..+++||+..+++... .... ..+....+
T Consensus 148 ~~~gll~~~~~---~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~ 224 (463)
T KOG2816|consen 148 SSIGLLSGTFG---AGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSS 224 (463)
T ss_pred HHHHHHHHHHH---HHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccch
Confidence 99999888777 99999999999999999999999999988888777 5668888765443331 1000 00111111
Q ss_pred hhHHHHHHHHHHhcCcchhhhHHHHHh-hhccccccc-eeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHH-Hhhcc
Q 013568 339 SSKQNMFQLWEAVKQPNVFLPTLFVFL-WQATPHSDS-AMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYN-GFLKN 415 (440)
Q Consensus 339 ~~~~~~~~~~~~l~~~~~~~~~l~~~~-~~~~~~~~~-~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~-~l~~r 415 (440)
...+..+...+.-.+|..+.+++..++ +..-..... ..+++....+|+++.+.+.+.+..++...++.++.. .+...
T Consensus 225 ~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~ 304 (463)
T KOG2816|consen 225 HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI 304 (463)
T ss_pred hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233333332234444444433333 222111222 346666678999999999888877777777776666 56677
Q ss_pred CCchhHHHHHHHH
Q 013568 416 VPLRKIFLANTIF 428 (440)
Q Consensus 416 ~g~r~~l~~~~~~ 428 (440)
++.+++...+...
T Consensus 305 l~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 305 LGEKRLISLGLLS 317 (463)
T ss_pred HhhhhHhhHHHHH
Confidence 7888855555433
No 165
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.13 E-value=3.8e-09 Score=106.81 Aligned_cols=154 Identities=16% Similarity=0.185 Sum_probs=127.4
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
+.....+|.+.++.+|.+....|++.+.+.+|..+ ..+.+.+.+|+ +++..+..+.++.+++.+.++ +.++.+
T Consensus 235 ~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-----~~~~lv~~~~~~~a~~~~~la-l~~~~~ 308 (524)
T PF05977_consen 235 SAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-----SSRRLVLLASLLFALALLLLA-LSPSFW 308 (524)
T ss_pred hHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----CcchhhHHHHHHHHHHHHHHh-cchHHH
Confidence 34455678888888999999999999999999888 45668888873 355666677777777777777 778888
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
...++.++.|++........++.+-...|++.||+..+++..... .+..+|.++.|.+.+.+|.+..+.+.++..++
T Consensus 309 ~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~---g~~~lGsll~G~la~~~g~~~al~~a~~~lll 385 (524)
T PF05977_consen 309 LALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF---GGMPLGSLLWGFLADHFGVRTALLIAGAALLL 385 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH---HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 888888999999999888899999999999999999999987777 78899999999999999999999887766555
Q ss_pred HHHh
Q 013568 308 TSGV 311 (440)
Q Consensus 308 ~~~~ 311 (440)
..++
T Consensus 386 ~~~~ 389 (524)
T PF05977_consen 386 SALI 389 (524)
T ss_pred HHHH
Confidence 5443
No 166
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.13 E-value=2.9e-09 Score=104.68 Aligned_cols=169 Identities=12% Similarity=0.056 Sum_probs=112.3
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhh-hHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSL-PWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l-~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
.++......++.... .......++|++| .|++.+++|++.....+ ...+ ..+.|++.|| +| +|+.+..+..
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r---~g--~~~~l~~~~~ 282 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR---AG--LWRTFILGVG 282 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH---hh--HHHHHHHHHH
Confidence 444444444444333 4445567888887 69999999998777654 3444 4678999999 45 5556655544
Q ss_pred HHHHHHHHHHhh-----hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcc-cccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 211 LGALSWSLMATI-----VESKYSAALSILLGSLSVAFSDVVVDSMVVERARG-ESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 211 ~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
+..+..+..... ..+...+.....+.+++.+...+.......+..++ +.+++..++.+.... +|..+||.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---lg~~~g~~~ 359 (390)
T TIGR02718 283 LAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRD---LGELIASSI 359 (390)
T ss_pred HHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHH---HHHHHHHHH
Confidence 432222211101 12222334444555666777777777787777766 778888888877766 999999999
Q ss_pred HHHhhhccchHHHHHHHHHHHHHHHHh
Q 013568 285 SGSMVDAYGVRFVFGVTALLPLITSGV 311 (440)
Q Consensus 285 ~g~l~~~~gw~~~f~i~~~~~~~~~~~ 311 (440)
+|++.+..||+..|++.+++.++..+.
T Consensus 360 ~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 360 AGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 999999999999999888776665443
No 167
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.11 E-value=1.5e-09 Score=106.78 Aligned_cols=145 Identities=19% Similarity=0.195 Sum_probs=107.1
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
.....++|.++++++|++..+.+++.+...++..+ .++.|+++|| +| ||+.+.++.++..+..+......++..
T Consensus 255 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr---~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (405)
T TIGR00891 255 HPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW---LG--RRKAYVCSLLAGQLLIIPVFAIGANVA 329 (405)
T ss_pred hhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--chhhhHHHHHHHHHHHHHHHHhCCchH
Confidence 34556788888888899999999998888888777 7788999999 45 555555554443232222221334444
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc-hHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG-VRFVFGVT 301 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g-w~~~f~i~ 301 (440)
.+.+..++.+++.+...+...+++.|.+|+++|++..++.+.... +|..++|.++|++.++.| |+..+...
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 330 VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGN---LGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHH---HHHHHHHHHHHHHHHhccccchhHHhh
Confidence 555555666666666667778899999999999998888776665 999999999999999988 87776653
No 168
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.11 E-value=3.7e-09 Score=102.92 Aligned_cols=175 Identities=14% Similarity=0.077 Sum_probs=113.3
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
++.+|.+++.+++.... .....|+|.|+++ .|++.. .+...++..+... +..++++||+.+.| +|+.......+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~--~g~~~~~d~~~r~~-~r~~~~~~~~~ 265 (368)
T TIGR00903 191 RKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGL--IGVAVIPDRVARAG-LRSIYIRAAAL 265 (368)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHH--HHHHHhhHHhhhhh-hHHHHHHHHHH
Confidence 45677777777666554 5667899999977 588764 4554333333222 23488888863334 33333332333
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 211 LGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
+.++....++ ...+....+++..+.+++.....+..+++..|.+|++.|+++.++.+.... +|++++|.+.+.+..
T Consensus 266 ~~a~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~---~~~~~~~~~~~~~~~ 341 (368)
T TIGR00903 266 LIAAFFLALA-FELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSR---AISVALALAAMLFIS 341 (368)
T ss_pred HHHHHHHHHH-HccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHH---HHHHHHHHHHHHHhc
Confidence 3333333333 333333445555666777776767788999999999999999998876655 999999999887773
Q ss_pred ccchHHHHHHHHHHHHHHHHhheeecc
Q 013568 291 AYGVRFVFGVTALLPLITSGVAVLVKE 317 (440)
Q Consensus 291 ~~gw~~~f~i~~~~~~~~~~~~~~~~e 317 (440)
|-+..|.+.++..++..+..+++++
T Consensus 342 --~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 342 --SAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7777888887777776665444344
No 169
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.08 E-value=5.9e-09 Score=103.99 Aligned_cols=177 Identities=19% Similarity=0.242 Sum_probs=102.9
Q ss_pred ccHHHHHHHHHHH-HHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 133 PDNFAVAMVYFVQ-GVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 133 ~~~~~~~~~~~~~-~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.+.+.+.+++. ... .....++|.++++++|.+..+.++..++..+...+ +++.|+++||+ | ||+.+..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~---g--rr~~~~~~~ 316 (432)
T PRK10406 242 RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI---G--RRTSMLCFG 316 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C--chHHHHHHH
Confidence 3445444443332 332 45667899999887899998888877776666555 78889999994 5 555554443
Q ss_pred HHHHHHHHHHHh-h--hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 210 LLGALSWSLMAT-I--VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 210 ~~~~~~~~~~~~-~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
++..+..+.+.. . .++....+....+.+++.+...+..+.+..|++|++.|+.+.++...... .+++...|.+.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~--~~~g~~~p~~~~ 394 (432)
T PRK10406 317 SLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVAN--ALFGGSAEYVAL 394 (432)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHH--HHHHhHHHHHHH
Confidence 333222221110 1 12222222222333344444445677889999999999988887653221 133444777777
Q ss_pred Hhhhccc-hHHHHHHHHHHHHHHHHhheeecc
Q 013568 287 SMVDAYG-VRFVFGVTALLPLITSGVAVLVKE 317 (440)
Q Consensus 287 ~l~~~~g-w~~~f~i~~~~~~~~~~~~~~~~e 317 (440)
.+ +..| |...++..++..++.++..+++++
T Consensus 395 ~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 395 SL-KSIGMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HH-HHhCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 55 4455 555666666666665555444443
No 170
>PRK10054 putative transporter; Provisional
Probab=99.08 E-value=5.2e-09 Score=103.08 Aligned_cols=178 Identities=12% Similarity=0.009 Sum_probs=118.8
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHH--hcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKD--DLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~--~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
++++.+.+..++..+. +....+.+.++.. +.+.+....+++.++..+.... +++.|.+.||. | +|+.+..+
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~---~--~~~~l~~~ 280 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA---N--IRPLMTAG 280 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC---C--chhHHHHH
Confidence 3444444444433332 3333355555532 2456666677776666554444 67889999983 3 67777777
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 209 GLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
.++..++...+....++.+.++++.++.+++.+...+.....+.+..|++.+++..+..+. .. +|..+||.++|.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~-~~---~G~~~Gp~~~G~l 356 (395)
T PRK10054 281 TLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSL-GW---LGAAINPLVSGVI 356 (395)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHHH-HH---HHHHHHHHHHHHH
Confidence 6666666555552234555666778899999888888888899999999999887665542 23 7999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHHhhe-eecccc
Q 013568 289 VDAYGVRFVFGVTALLPLITSGVAV-LVKEQQ 319 (440)
Q Consensus 289 ~~~~gw~~~f~i~~~~~~~~~~~~~-~~~e~~ 319 (440)
.++.|....|++.+....+..+..+ ..+|+|
T Consensus 357 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 357 LTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred HHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 9999999999887776665555333 334433
No 171
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.08 E-value=1.5e-09 Score=107.62 Aligned_cols=166 Identities=14% Similarity=0.158 Sum_probs=108.4
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHh-cCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDD-LHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.+.+|...+.+++.... .....++|.++++. .|.+..+.+++.+...++..+ ..++|+++||+ | +||..+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~---~-~r~~~~~~~ 316 (412)
T TIGR02332 241 TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL---K-ERKHHTALP 316 (412)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc---C-ccHHHHHHH
Confidence 34566666666665554 56677999999872 467888888887778888777 66789999994 4 455444433
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 209 GLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
.++..++.+... ...+....+.+.++.+++.....+.......|.+|+++|+.+.++.+.... +|.+++|.+.|.+
T Consensus 317 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~---~g~~~~p~~~g~i 392 (412)
T TIGR02332 317 YLFAAAGWLLAS-ATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGN---IGSALSPFLIGIL 392 (412)
T ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhh---hhhhhhhhhcccc
Confidence 333333332222 222222222222333333333333444555677888999988888877766 9999999999999
Q ss_pred hhccc-hHHHHHHHHHHH
Q 013568 289 VDAYG-VRFVFGVTALLP 305 (440)
Q Consensus 289 ~~~~g-w~~~f~i~~~~~ 305 (440)
.+..| |++.|++.+++.
T Consensus 393 ~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 393 KDATGSFNSGLWFVAALL 410 (412)
T ss_pred cccCCCCchhHHHHHHHH
Confidence 98875 999998776644
No 172
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.07 E-value=1e-09 Score=109.04 Aligned_cols=188 Identities=18% Similarity=0.128 Sum_probs=124.5
Q ss_pred cccccccCCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCC---
Q 013568 124 AKFFGVDLSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFG--- 198 (440)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G--- 198 (440)
.|+.....++.+|++.+..++.... ..+..++|.|+++.+|++..+.|++.++..+...+ ..++|.++||....+
T Consensus 249 vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~ 328 (466)
T KOG2532|consen 249 VPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSE 328 (466)
T ss_pred CCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCch
Confidence 3344445666899999999998887 78888999999999999999999998888877766 889999999972101
Q ss_pred -CCcchhhhHHHHHHHHHHHHHHhhhchhH-HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhh
Q 013568 199 -YRRRSYLVLSGLLGALSWSLMATIVESKY-SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAF 276 (440)
Q Consensus 199 -~~rr~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 276 (440)
.+||..-.++....+++++++++...... ..+++..+.-...|...+....-..|..|++ -+..+++.+.... +
T Consensus 329 t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~-a~~l~g~~~~~~~---~ 404 (466)
T KOG2532|consen 329 TTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQH-AGFVMGIINFVGA---L 404 (466)
T ss_pred HhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchH-HHHHHHHHHHHHH---H
Confidence 13444445566666666666663332222 2222222222222223333333333334333 3445555554444 9
Q ss_pred HHHHHHHHHHHhhh---ccchHHHHHHHHHHHHHHHHhheee
Q 013568 277 GGIVSSYFSGSMVD---AYGVRFVFGVTALLPLITSGVAVLV 315 (440)
Q Consensus 277 g~~ig~~i~g~l~~---~~gw~~~f~i~~~~~~~~~~~~~~~ 315 (440)
.++++|.+.|.+.+ ...|+++|++.+++.++..+++.+.
T Consensus 405 ~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 405 AGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 99999999999984 3479999999999888877655544
No 173
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.07 E-value=5.6e-09 Score=103.12 Aligned_cols=151 Identities=20% Similarity=0.191 Sum_probs=94.1
Q ss_pred HHHHHHHHhcCCChhhhHHHHHhhhh-hHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHH---HhhhchhHH
Q 013568 154 AVNFYLKDDLHLDPAETAVISGFSSL-PWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLM---ATIVESKYS 228 (440)
Q Consensus 154 ~l~~~l~~~~g~s~~~~g~~~s~~~l-~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~---~~~~~~~~~ 228 (440)
..++++.+++|++.++++++.+...+ +..+ .++.|++.||+ | +|+.+..+.++..+..+.+ +...++.+.
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~---g--~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~ 305 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL---G--LYRSLMLFGVLQAVSNLGYWVLAVTPKHLWT 305 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH---h--HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 44556666689999999998765544 3455 67889999994 4 5555555444444332222 212234444
Q ss_pred HHHHHHH----HHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHH
Q 013568 229 AALSILL----GSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALL 304 (440)
Q Consensus 229 ~~~~~~l----~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~ 304 (440)
++++.++ .|++.+...+....++.+..|.++ .++++.... +|.++++.++|.+.+++||+..|.+.+++
T Consensus 306 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---l~~~~~~~~~G~l~~~~G~~~~f~~~~~~ 378 (402)
T PRK11902 306 MALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALAS---VGRVYVGPTSGYLVEAYGWPGFYLMTVVI 378 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHH---HHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 4444433 344444445555555555555443 344444444 78877777899999999999999999888
Q ss_pred HHHHHHhheeec
Q 013568 305 PLITSGVAVLVK 316 (440)
Q Consensus 305 ~~~~~~~~~~~~ 316 (440)
+++..++....+
T Consensus 379 ~~~~~~~~~~~~ 390 (402)
T PRK11902 379 ALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHHHHh
Confidence 877766554333
No 174
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=99.05 E-value=1.5e-08 Score=98.11 Aligned_cols=273 Identities=19% Similarity=0.199 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHh-hhHHHHHHHHHHH-hcCCChhhhHHHHHhhhhhHHHHhhhhhhcccc--CcCCCCcchhhhHHHHH
Q 013568 136 FAVAMVYFVQGVL-GLARLAVNFYLKD-DLHLDPAETAVISGFSSLPWLIKPLYGFISDSL--PLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 136 ~~~~~~~~~~~~~-~~~~~~l~~~l~~-~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~--~~~G~~rr~~l~~~~~~ 211 (440)
..+.+.|+.||+- ++....+|..+++ .-++|.++.|. +++...+|.+..+|+++.|-+ +++| |||.+++-...+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~-fSla~~PfSlKlLWaPiVDs~y~~~~G-RRKSWiiP~Q~l 80 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAI-FSLASYPFSLKLLWAPIVDSVYSKRIG-RRKSWIIPIQYL 80 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHhee-eeeeechhHHHHhhhhhhhhhcccccC-CcchhhhHHHHH
Confidence 4578889999997 7766788888877 13789998884 677888999999999999997 7899 899998877766
Q ss_pred HHHHHHHHHhhhc-----------------------hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhH
Q 013568 212 GALSWSLMATIVE-----------------------SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQS 268 (440)
Q Consensus 212 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 268 (440)
.++..+.++.... +...+..+.++.-+..+.++.++.++.-.+..++.++.+....+
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 6665555442220 01123455567777888899999999999999999988777776
Q ss_pred HhhhhhhhHHHHHHHHHHHhhh-----c--------cc---hHHHHHHHHHHHHH-HHHhheeeccccccCCCc--C---
Q 013568 269 LCWGSSAFGGIVSSYFSGSMVD-----A--------YG---VRFVFGVTALLPLI-TSGVAVLVKEQQVLGPSR--R--- 326 (440)
Q Consensus 269 ~~~~~~~~g~~ig~~i~g~l~~-----~--------~g---w~~~f~i~~~~~~~-~~~~~~~~~e~~~~~~~~--~--- 326 (440)
++.. +|.+++-.+.-.+-+ . .| -..-....+.+.++ ...+.++-+|++..+... +
T Consensus 161 vG~~---~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~ 237 (544)
T PF13000_consen 161 VGQT---AGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPIN 237 (544)
T ss_pred hHhh---hhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccc
Confidence 6655 666665544333321 0 11 01111122222222 233455556654221100 0
Q ss_pred ----CCCC----CCCC-----ccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccccccceeeeeeeccCCCChhhHHH
Q 013568 327 ----QNLP----LGDP-----SFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEFLGR 393 (440)
Q Consensus 327 ----~~~~----~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~ 393 (440)
+.++ .++. ......++..+.+++++|.|.+..+++..+..-+......+....-.-+.|++.++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl 317 (544)
T PF13000_consen 238 KSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLAL 317 (544)
T ss_pred cccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHH
Confidence 0000 0000 01123456677888999999988877776666553322222222111368999988887
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 013568 394 VKFVTSVASLLGVGLYNGFL 413 (440)
Q Consensus 394 ~~~~~~i~~~~g~~~~~~l~ 413 (440)
+..+..-..++..+..+++.
T Consensus 318 ~~li~~P~qii~~~~~~Kws 337 (544)
T PF13000_consen 318 LVLIDFPFQIILPYYIGKWS 337 (544)
T ss_pred HHHHhhhHHHHHHHHhhhhh
Confidence 77665555555556666654
No 175
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.05 E-value=2.4e-09 Score=108.89 Aligned_cols=173 Identities=12% Similarity=0.041 Sum_probs=104.7
Q ss_pred HHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHH------------HHHhhhhhHHH-HhhhhhhccccCcCCCCcchh
Q 013568 139 AMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAV------------ISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSY 204 (440)
Q Consensus 139 ~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~------------~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~ 204 (440)
...++...+. .....+.|.++++ .|++..+.+. ...+..++..+ ..+.++++|| +| ||+.
T Consensus 294 ~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr---~g--RR~~ 367 (502)
T TIGR00887 294 AGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI---IG--RKPI 367 (502)
T ss_pred HHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hc--chhH
Confidence 3344444333 3344467777866 6886543211 11112222333 4567999999 45 7777
Q ss_pred hhHHHHHHHHHHHHHHhhhc--hhHHHHHHHHH-HHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHH
Q 013568 205 LVLSGLLGALSWSLMATIVE--SKYSAALSILL-GSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVS 281 (440)
Q Consensus 205 l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig 281 (440)
++++.++..++.++++.... +....++..++ ..++.....+..+.+.+|++|.+.|+++.++.+.... +|.+++
T Consensus 368 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~---~~~~~~ 444 (502)
T TIGR00887 368 QLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGK---AGAIIG 444 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhh---hHHHHH
Confidence 77766666655544442221 11111111111 1222222345667788999999999999988887777 999999
Q ss_pred HHHHHHhhhc----------cchHHHHHHHHHHHHHHHHhheeeccccc
Q 013568 282 SYFSGSMVDA----------YGVRFVFGVTALLPLITSGVAVLVKEQQV 320 (440)
Q Consensus 282 ~~i~g~l~~~----------~gw~~~f~i~~~~~~~~~~~~~~~~e~~~ 320 (440)
|.+.+++.+. .++...|++.+++.++..+..+++||++.
T Consensus 445 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 445 QFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred HHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 9999998873 34566788887777776666678898764
No 176
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.05 E-value=2.8e-09 Score=103.23 Aligned_cols=151 Identities=9% Similarity=0.001 Sum_probs=114.3
Q ss_pred cHHHHHHHHHHHHHh-h-hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-G-LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~-~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
.++.+....+..... . ......|.+.++.+|.+..+.+++.+...++..+ .++.|++.||+ | ||+.+..+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~--~~~~~~~~~~ 285 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF---K--RMALMTGAIF 285 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c--hhHHHHHHHH
Confidence 444444444443333 2 3336778888877899999999998888888777 77889999983 4 6666666655
Q ss_pred HHHHHHHHHHhhhc-hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 211 LGALSWSLMATIVE-SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 211 ~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
+..++...+. ..+ +.+..+++.++.|++.+...+...+++.|..|+++|++..++.+.... +|..+++.++|++.
T Consensus 286 ~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 286 VIGLAILVVG-LTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSH---AAWPLGLILAGPLA 361 (365)
T ss_pred HHHHHHHHHH-hhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 5555555555 344 366677788999999999888999999999999999999998887777 99999999999998
Q ss_pred hccc
Q 013568 290 DAYG 293 (440)
Q Consensus 290 ~~~g 293 (440)
+.+|
T Consensus 362 ~~~g 365 (365)
T TIGR00900 362 DHLG 365 (365)
T ss_pred HHcC
Confidence 8654
No 177
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.04 E-value=1.9e-08 Score=99.09 Aligned_cols=168 Identities=14% Similarity=0.070 Sum_probs=111.1
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.++...+..+..... .....++++++.+++|++..+.+++.....++..+ ..+.|++.||. +|+.++.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~------~~~~l~~~~ 288 (394)
T PRK10213 215 RPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS------VKLALAGAP 288 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc------chhHHHHHH
Confidence 34455444433333332 22334554444455799999999988888887777 66779999982 333333333
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 210 LLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
.+..++...+....++.+.+.+..++.|++.+...+...+++.+..|+ ++++..++...... +|..+|+.++|++.
T Consensus 289 ~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---lg~~~G~~l~G~l~ 364 (394)
T PRK10213 289 LVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQ---LANTCGAAIGGYAL 364 (394)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 333333223322445566666777888999988888888888888774 44556665555555 99999999999999
Q ss_pred hccchHHHHHHHHHHHHHHH
Q 013568 290 DAYGVRFVFGVTALLPLITS 309 (440)
Q Consensus 290 ~~~gw~~~f~i~~~~~~~~~ 309 (440)
+..|++..++..+++.++..
T Consensus 365 ~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 365 DNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred hccChhhHHHHHHHHHHHHH
Confidence 99999998888776554443
No 178
>PRK15075 citrate-proton symporter; Provisional
Probab=99.03 E-value=1.8e-08 Score=100.64 Aligned_cols=139 Identities=21% Similarity=0.154 Sum_probs=94.0
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHH-HHHh--hhc
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWS-LMAT--IVE 224 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~-~~~~--~~~ 224 (440)
.....++|.|+++.+|++..+.++...+..++..+ .+++|+++|| +| ||+.++.+..+..+... .... ..+
T Consensus 255 ~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr---~g--~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 255 YLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR---IG--RRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--chHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45677899999987899999988887777777666 7788999999 45 55555544333222111 1111 122
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhh-HHhhhhhhhHHHHHHHHHHHhhhccchH
Q 013568 225 SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQ-SLCWGSSAFGGIVSSYFSGSMVDAYGVR 295 (440)
Q Consensus 225 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~~~~g~~ig~~i~g~l~~~~gw~ 295 (440)
+...+.+..++.+++.+...+....++.|.+|++.|+.+.++. +.+.. +++.++|.+.|++.+..|++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~---~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATA---IFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHH---HHhhhHHHHHHHHHHhcCCc
Confidence 3333334445556666666666778899999999999887774 33333 45778999999999988854
No 179
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.02 E-value=2.1e-08 Score=98.26 Aligned_cols=179 Identities=21% Similarity=0.283 Sum_probs=124.7
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcC-CChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLH-LDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVL 207 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g-~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~ 207 (440)
.+++++...+..+..+.. +.+....+.|+++ .| .+....+.+.++..++=.. -.+.+++..| +| -|+++.+
T Consensus 205 k~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~-~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r---~g--~~~ll~~ 278 (400)
T PF03825_consen 205 KNPRFLVFLLAAFLIGISHAAYYTFFSIYLQE-LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR---FG--IKWLLLL 278 (400)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--HHHHHHH
Confidence 344566555555555555 6777888899988 46 7777777665444443333 2345777777 45 7778888
Q ss_pred HHHHHHHHHHHHHhhhchhHHHHHH----HHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHh-hhhhhhHHHHHH
Q 013568 208 SGLLGALSWSLMATIVESKYSAALS----ILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLC-WGSSAFGGIVSS 282 (440)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~~~~g~~ig~ 282 (440)
+.+..++=+.+.+...++.+...+. ..+.|+..+........++.+..|++.|+++.++++.. .+ +|..+|.
T Consensus 279 a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~G---lg~~iG~ 355 (400)
T PF03825_consen 279 ALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFG---LGGAIGS 355 (400)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhh---HHHHHHH
Confidence 8888888777777443554443333 34699999999999999999999999999999988754 56 9999999
Q ss_pred HHHHHhhhccchH------HHHHHHHHHHHHHHHh-heeeccc
Q 013568 283 YFSGSMVDAYGVR------FVFGVTALLPLITSGV-AVLVKEQ 318 (440)
Q Consensus 283 ~i~g~l~~~~gw~------~~f~i~~~~~~~~~~~-~~~~~e~ 318 (440)
.++|++.+++|-+ ..+.+.+++.++..++ +++.||+
T Consensus 356 ~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 356 LIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 9999999987644 4455555555554443 3344443
No 180
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.02 E-value=1e-08 Score=91.86 Aligned_cols=162 Identities=15% Similarity=0.104 Sum_probs=115.5
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
+.+.+|.+.+.+++.... .-+...-+.++++.+|+|+...+.+.+......+. .|++|.++|| .| ++-.++..+
T Consensus 262 f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk---~G-~n~~wv~~a 337 (459)
T KOG4686|consen 262 FYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDK---YG-FNLWWVASA 337 (459)
T ss_pred cCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhh---hc-ceehhHHHH
Confidence 345678777777766665 34444567778888999999999887766555555 8999999999 46 344444445
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 209 GLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
.+...++...+.+ +.+.-.....+.|+.++......+..++.+.|+++.|++.++.+ ...|+|-.+.|+++|++
T Consensus 338 ~~~tl~~H~~l~F---t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~q---sIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 338 CILTLLGHSGLFF---TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQ---SIQNLGLAFIPIIAGFI 411 (459)
T ss_pred HHHHHHHhhhHHh---hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHH---HHHhhhhhHHhhhhhee
Confidence 5555566555552 23334556678899999888888999999999999997766555 44559999999999999
Q ss_pred hhccc---hHHHHHHHH
Q 013568 289 VDAYG---VRFVFGVTA 302 (440)
Q Consensus 289 ~~~~g---w~~~f~i~~ 302 (440)
.++-| |--.|.+..
T Consensus 412 ~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 412 ADGDGSYDNLEAFFLII 428 (459)
T ss_pred ecCCCchhhHHHHHHHH
Confidence 97654 444444433
No 181
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.02 E-value=1.8e-09 Score=107.77 Aligned_cols=154 Identities=15% Similarity=0.237 Sum_probs=103.9
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.++.+.+.++..... .......+.+.++.++ +....+++.++..++..+ .+++++++|| +| ||+.+..+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r---~g--~~~~~~~~~ 294 (437)
T TIGR00792 221 NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK---FG--RKILFAGGI 294 (437)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--cHHHHHHHH
Confidence 44555555555544443 3333334445554444 455667666666666666 7888999999 45 666777777
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhc-------ccccccchhhhHHhhhhhhhHHHHHH
Q 013568 210 LLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERAR-------GESQSVSGSLQSLCWGSSAFGGIVSS 282 (440)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~~~~g~~ig~ 282 (440)
++.+++.+.+....++.+..++..++.|++.+...+..+++++|..+ ++.+|...++++.... +|..+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~---~g~~lg~ 371 (437)
T TIGR00792 295 LLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRK---LGQALAG 371 (437)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHH---HHHHHHH
Confidence 66666665555333455556667788889998888889999999876 3345666677776666 9999999
Q ss_pred HHHHHhhhccch
Q 013568 283 YFSGSMVDAYGV 294 (440)
Q Consensus 283 ~i~g~l~~~~gw 294 (440)
.+.|++.+..||
T Consensus 372 ~i~g~ll~~~G~ 383 (437)
T TIGR00792 372 FLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHcCC
Confidence 999999876665
No 182
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.01 E-value=2.3e-08 Score=98.03 Aligned_cols=149 Identities=12% Similarity=0.155 Sum_probs=97.3
Q ss_pred HHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHH
Q 013568 152 RLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAA 230 (440)
Q Consensus 152 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (440)
...+++++++.+|.+..+.+++.+...++..+ .++.|++.|| +| +|+.+..+..+..++.+.+....++.+..+
T Consensus 219 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r---~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 293 (382)
T PRK10091 219 FSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGR---YS--PLRIAAVTDFIIVLALLMLFFFGGMKTASL 293 (382)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccc---cC--chhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 34567778777899999999998888888777 7888999999 44 556666665565555544432334444445
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHh-hhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHH
Q 013568 231 LSILLGSLSVAFSDVVVDSMVVE-RARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA-YGVRFVFGVTALLPLIT 308 (440)
Q Consensus 231 ~~~~l~g~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~-~gw~~~f~i~~~~~~~~ 308 (440)
++.++.+++.....+.......+ ..+++.++.. ....... +|..+||.++|++.+. .+|++.+.+.+++.++.
T Consensus 294 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~ 368 (382)
T PRK10091 294 IFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFN---LGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAA 368 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHH---HHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHH
Confidence 55555555554433333333333 3333333322 2233344 9999999999999985 68999999887766655
Q ss_pred HH
Q 013568 309 SG 310 (440)
Q Consensus 309 ~~ 310 (440)
..
T Consensus 369 ~~ 370 (382)
T PRK10091 369 MS 370 (382)
T ss_pred HH
Confidence 44
No 183
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.01 E-value=3.6e-09 Score=101.04 Aligned_cols=148 Identities=20% Similarity=0.223 Sum_probs=109.4
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhh-hhHHHHhhhhhhcccc-CcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSS-LPWLIKPLYGFISDSL-PLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~-l~~~~~~~~g~l~Dr~-~~~G~~rr~~l~~~~~ 210 (440)
+.+.+....+...+. ..-...+++|+++ +|++....+.+-.+.- .+..+||+.|..+||. .++| ||||++..+..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~G-RRRPfI~~~s~ 110 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYG-RRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccc-cccchHHHhhH
Confidence 344444444544444 4666788899988 7999998887654443 4445599999999999 7899 99999999988
Q ss_pred HHHHHHHHHHhhhchhH-----------------HHHHHHHHHHHHHHhhhhhhhHHHHhhhccccccc-chhhhHHhhh
Q 013568 211 LGALSWSLMATIVESKY-----------------SAALSILLGSLSVAFSDVVVDSMVVERARGESQSV-SGSLQSLCWG 272 (440)
Q Consensus 211 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~ 272 (440)
..+++.+++. .+.+.. ..++...+.-+.......+.-+++.|+...+++.+ +++.++.+.+
T Consensus 111 ~i~~~l~Lig-~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 111 LIAVSLFLIG-YAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHHhhhh-hHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHH
Confidence 8888877766 333221 22344455556667788889999999998877776 8999998888
Q ss_pred hhhhHHHHHHHHHHH
Q 013568 273 SSAFGGIVSSYFSGS 287 (440)
Q Consensus 273 ~~~~g~~ig~~i~g~ 287 (440)
+|+.+|-..+++
T Consensus 190 ---vGnvLGY~~g~y 201 (498)
T KOG0637|consen 190 ---VGNVLGYALGSY 201 (498)
T ss_pred ---hcceeeeecccc
Confidence 888888877764
No 184
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.99 E-value=2.9e-08 Score=98.12 Aligned_cols=170 Identities=9% Similarity=-0.113 Sum_probs=112.7
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
+++++.+.+..+..... .......|.++.+++|.+..+.++......++..+ .++.|+++||+ | +|+.+.++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~---~--~~~~~~~~~ 288 (406)
T PRK15402 214 NRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR---P--LRSLIRMGL 288 (406)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--HHHHHHHHH
Confidence 33455544444433332 23344567777777899999999876666666666 67889999993 4 566666666
Q ss_pred HHHHHHHHHHHhh----hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH
Q 013568 210 LLGALSWSLMATI----VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 210 ~~~~~~~~~~~~~----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~ 285 (440)
++..++...+... ..+...+++..++.|++.+...+......... +++++++..++.+.... +|..+|+.++
T Consensus 289 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~---~~~~~g~~~~ 364 (406)
T PRK15402 289 WPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSM---LIFTVGIELS 364 (406)
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHH---HHHHHHHHHH
Confidence 6555554444421 12444556677888888887766655555433 45788988888887777 8999999999
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHH
Q 013568 286 GSMVDAYGVRFVFGVTALLPLITSG 310 (440)
Q Consensus 286 g~l~~~~gw~~~f~i~~~~~~~~~~ 310 (440)
+.+.+..++....+..++..++..+
T Consensus 365 ~~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK15402 365 KHAYLGGGNGLFNLFNLANGLLWLL 389 (406)
T ss_pred HhcccCCchHHHHHHHHHHHHHHHH
Confidence 9998887776655555544444433
No 185
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.97 E-value=1.4e-08 Score=101.09 Aligned_cols=143 Identities=13% Similarity=0.077 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHH
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYS 228 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 228 (440)
....++|.++++ .|.+..+.+.+.++..++..+ .+++|+++||+ | ||+.+..+.++..+..+.+.....+..
T Consensus 249 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~- 321 (426)
T PRK12307 249 PIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI---G--LKKTFSIGLLMSFLFIFPLFRIPQDNY- 321 (426)
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c--cHHHHHHHHHHHHHHHHHHHHHccccH-
Confidence 355678888887 599999999888877777766 78889999994 5 666666665555444433331222211
Q ss_pred HHHHHHHHHHHH--HhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHH
Q 013568 229 AALSILLGSLSV--AFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTA 302 (440)
Q Consensus 229 ~~~~~~l~g~~~--~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~ 302 (440)
..+..++.+++. ....+....++.|.+|++.|+++.++...... +|+.++|.+.|++.+.+|+....++..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~---~~~~~gp~~~g~l~~~~g~~~~~~~~~ 394 (426)
T PRK12307 322 LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAA---TSGTFNSMAATWLGITMGLGAALTFIV 394 (426)
T ss_pred HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHh---HHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 222222333322 22334566788999999999999887765555 899999999999999888766544433
No 186
>TIGR00895 2A0115 benzoate transport.
Probab=98.96 E-value=1e-08 Score=100.48 Aligned_cols=144 Identities=15% Similarity=0.109 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
.+.+.+.++..... .....++|.+. +++|.+..+.+++.++..++..+ .++.|+++||+ | ||..+.... +.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~--~~~~~~~~~-~~ 324 (398)
T TIGR00895 252 TVLLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL---G--PRVTALLLL-LG 324 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---c--hHHHHHHHH-HH
Confidence 33344444443333 44555677444 45899999999988888888777 77889999994 4 554443333 33
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 213 ALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
.+...++.....+....+++.++.|++.+...+...+++.|.+|+++|+++.++...... +|..+||.++|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~g~~~g~~~~G~l 397 (398)
T TIGR00895 325 AVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGR---LGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH---HHHHHHHHhHHhc
Confidence 333333332245556667777889999999889999999999999999998888877666 9999999999875
No 187
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.95 E-value=7.5e-09 Score=102.10 Aligned_cols=177 Identities=18% Similarity=0.124 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHh--hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 135 NFAVAMVYFVQGVL--GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 135 ~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
....+...+.+.+. .........++++ -|++..++.+......+...+ ..+...+.|| .| ||+.++.+..+
T Consensus 271 ~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~---~g--RRpLll~~~~~ 344 (485)
T KOG0569|consen 271 LLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR---LG--RRPLLLISLSL 344 (485)
T ss_pred HHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--CcHHHHHHHHH
Confidence 44455555666665 3444445555666 599999888887666666666 6788999999 45 99999998888
Q ss_pred HHHHHHHHHhhh---chh--H---HHHHHHHHHHHHHHh-hhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHH
Q 013568 212 GALSWSLMATIV---ESK--Y---SAALSILLGSLSVAF-SDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSS 282 (440)
Q Consensus 212 ~~~~~~~~~~~~---~~~--~---~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~ 282 (440)
..++.+++.... +.. + ..+++.++..++.+. ..+..+-+.+|++|++.|+.+.++...... +..++-.
T Consensus 345 ~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w---~~~fiv~ 421 (485)
T KOG0569|consen 345 MAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNW---LSNFIVG 421 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHH---HHHHHHH
Confidence 877766655221 111 1 123444555555544 467888899999999999988888877777 7777766
Q ss_pred HHHHHhhhccchHHHHHHHHHHHHHHHH-hheeecccccc
Q 013568 283 YFSGSMVDAYGVRFVFGVTALLPLITSG-VAVLVKEQQVL 321 (440)
Q Consensus 283 ~i~g~l~~~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~ 321 (440)
.....+.+.+|- +.|.+..+..++..+ ++..+||++.+
T Consensus 422 ~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 422 FAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 666667677776 667777766666655 67789998753
No 188
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.95 E-value=3.9e-08 Score=99.36 Aligned_cols=157 Identities=15% Similarity=0.077 Sum_probs=103.7
Q ss_pred HHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhh-chh--HHH
Q 013568 154 AVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIV-ESK--YSA 229 (440)
Q Consensus 154 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~-~~~--~~~ 229 (440)
..|.+.++ +|.+....++......+...+ .++.|+++|| +| ||+.++.+.++.+++.++++... .+. ...
T Consensus 293 ~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr---~g--~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 293 YAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDK---FG--RKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH---hc--ChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 44555555 788877766665555555555 7788999999 45 77778887777777666554221 111 122
Q ss_pred HHHHHHHHHHHHh-hhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHH------HhhhccchHHHHHHHH
Q 013568 230 ALSILLGSLSVAF-SDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSG------SMVDAYGVRFVFGVTA 302 (440)
Q Consensus 230 ~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g------~l~~~~gw~~~f~i~~ 302 (440)
..+.++.+++.+. ..+....++.|.+|+++|+.+.++...... +|.++++.+.+ ++.+.++|++.|++.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~---~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 443 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQW---IANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYG 443 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHH---HHHHHHHHHhHHHHhccchhhhccCccHHHHHH
Confidence 2333444444443 335678999999999999999988877666 77777655544 4446788999999888
Q ss_pred HHHHHHHHh-heeecccc
Q 013568 303 LLPLITSGV-AVLVKEQQ 319 (440)
Q Consensus 303 ~~~~~~~~~-~~~~~e~~ 319 (440)
++.++.++. +++.||++
T Consensus 444 ~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 444 CMGVLAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHHHHHhccccCC
Confidence 777666654 44566654
No 189
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.94 E-value=3.5e-08 Score=110.43 Aligned_cols=168 Identities=10% Similarity=-0.000 Sum_probs=122.6
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.++.+.+.++...+. +....++|.|+++.+|.+..+.|++.+.+.++.++ +++.|+++|+. + ++..+..+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~---~--~~~~~~~~~ 298 (1140)
T PRK06814 224 DKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR---I--TLLYVPIGA 298 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc---e--eeeeehHHH
Confidence 34566655555554444 56667899999998999999999999999999888 77889999873 2 333444443
Q ss_pred HHHHHHHHHHHhh-------------------hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHh
Q 013568 210 LLGALSWSLMATI-------------------VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLC 270 (440)
Q Consensus 210 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 270 (440)
++..++.+.+++. ..+.+.++++.++.|++.+...+...+++.+.+|++.+|+++++.++.
T Consensus 299 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~ 378 (1140)
T PRK06814 299 LLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVL 378 (1140)
T ss_pred HHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHH
Confidence 4443333323311 145566677788889999998889999999999999999999999888
Q ss_pred hhhhhhHHHHHHHHHHHhhh-ccchHHHHHHHHHHHHH
Q 013568 271 WGSSAFGGIVSSYFSGSMVD-AYGVRFVFGVTALLPLI 307 (440)
Q Consensus 271 ~~~~~~g~~ig~~i~g~l~~-~~gw~~~f~i~~~~~~~ 307 (440)
.. +|..++++++|.+.+ ..++...|++.+++.++
T Consensus 379 ~~---~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 379 NA---AFMVAGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HH---HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 77 999999999998874 45677777665554333
No 190
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.92 E-value=3.6e-08 Score=110.45 Aligned_cols=164 Identities=18% Similarity=0.090 Sum_probs=119.9
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChh-hhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPA-ETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~-~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
.++.+.+..++.... .....+++.++++.+|++.. +.+++.++..++.++ .+++|+++||+ + ++..+.++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~---~--~~~~~~~~~~ 307 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH---I--ELGLVPLGAL 307 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---e--EccchhHHHH
Confidence 344444433333333 45666788899888999999 999998888888777 67889999984 4 5556666666
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 211 LGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
+.+++.+++. ...+.+.++++.++.|++.+...+...+++.+..|++.|++..++.++... +|.++++.+++.+..
T Consensus 308 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~---lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 308 GLALSLFLLP-TAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQN---VGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 6666665555 455666777778889999998888889999999999999999998887777 888888877776643
Q ss_pred -ccchHHHHHHHHHHHH
Q 013568 291 -AYGVRFVFGVTALLPL 306 (440)
Q Consensus 291 -~~gw~~~f~i~~~~~~ 306 (440)
.+++...|++.+.+.+
T Consensus 384 ~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 384 LGLSPAGLFYLIALVTL 400 (1146)
T ss_pred hccCHHHHHHHHHHHHH
Confidence 2456666666554443
No 191
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.92 E-value=3.2e-08 Score=97.71 Aligned_cols=152 Identities=14% Similarity=0.087 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHH
Q 013568 151 ARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSA 229 (440)
Q Consensus 151 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 229 (440)
....+|.++++. +.++.+.+++.++..+.... ..+.+++.||. ++ .++.+..+.++..++..+++ ..++.+.+
T Consensus 227 ~~~~~p~~~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r--~~--~~~~~~~~~~~~~~~~~~l~-~~~~~~~~ 300 (400)
T PRK11646 227 VMLMLPIMVNDI-AGSPSAVKWMYAIEACLSLTLLYPIARWSEKR--FR--LEHRLMAGLLIMSLSMFPIG-MVSNLQQL 300 (400)
T ss_pred HHHhhhhhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--cc--hhHHHHHHHHHHHHHHHHHH-HhhhHHHH
Confidence 345678888875 44778888887766655443 44446666651 23 34445556556666655555 45666666
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc---c-hHHHHHHHHHHH
Q 013568 230 ALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY---G-VRFVFGVTALLP 305 (440)
Q Consensus 230 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~---g-w~~~f~i~~~~~ 305 (440)
++..++.+++.+...+...+++.+..|+++|++..++++.... +|..+||.++|++.++. + ....|++.+++.
T Consensus 301 ~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~---~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~ 377 (400)
T PRK11646 301 FTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLA---LGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIG 377 (400)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHH---HHHHhcccchHHHHHHHhhcCCcchHHHHHHHHH
Confidence 6666778888888888888999999999999999999988877 99999999999998764 3 245555555555
Q ss_pred HHHHHh
Q 013568 306 LITSGV 311 (440)
Q Consensus 306 ~~~~~~ 311 (440)
++..+.
T Consensus 378 ~~~~~~ 383 (400)
T PRK11646 378 LITLLA 383 (400)
T ss_pred HHHHHH
Confidence 544443
No 192
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.92 E-value=4e-08 Score=95.24 Aligned_cols=151 Identities=12% Similarity=0.049 Sum_probs=101.5
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
+.++.+.+.+++.... .....++|.++++ .|.+..+.+.+.++..++..+ +++.|+++||+ | +||..+..+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~---~-~~~~~~~~~~~ 271 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRV---K-DQRGIVAVLAV 271 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh---c-cchHHHHHHHH
Confidence 3455444444433333 4455688889887 699999999999998888887 78889999994 3 46666666666
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcc-cccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 211 LGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARG-ESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
+..++.+.+. ...+.... ...++.|++.+...+...+.+.+..++ ++++...++.+ ..+++|..++|.+.|++.
T Consensus 272 ~~~~~~~~~~-~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 272 LQLVGLCGLL-FAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQ---SIGYLLAALGPLFVGVLH 346 (355)
T ss_pred HHHHHHHHHH-HhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 6666655555 33322222 244677888888777777776665543 44555555444 333488899999999999
Q ss_pred hccc
Q 013568 290 DAYG 293 (440)
Q Consensus 290 ~~~g 293 (440)
++.|
T Consensus 347 ~~~g 350 (355)
T TIGR00896 347 DISG 350 (355)
T ss_pred HHhc
Confidence 8776
No 193
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.91 E-value=8.3e-08 Score=91.18 Aligned_cols=146 Identities=16% Similarity=0.182 Sum_probs=106.2
Q ss_pred hhHHHHHHHHHHHh--cCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhch
Q 013568 149 GLARLAVNFYLKDD--LHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVES 225 (440)
Q Consensus 149 ~~~~~~l~~~l~~~--~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~ 225 (440)
.....|++.|+++. +|++..+.++..+.+..++.+ ..+.++++|| +| +|+.+.++..+..++.++.. ..++
T Consensus 157 ~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r---~g--~~~~l~~~~~l~~~~~~l~~-~~~~ 230 (310)
T TIGR01272 157 VSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM---IS--QGRYLAFNAFLAVLLSIGAA-LTHG 230 (310)
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--HHHHHHHHHHHHHHHHHHHH-HcCC
Confidence 56778999999863 699999999999999998888 6788999999 45 44455566555555544333 3333
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHH
Q 013568 226 KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLP 305 (440)
Q Consensus 226 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~ 305 (440)
. ......++.|++.+...+...+...+..+++. +.+.++.. .+.+|+.++|.+.|.+.+..|.+..|++..++.
T Consensus 231 ~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-~~asai~~----~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~ 304 (310)
T TIGR01272 231 Y-VAMWFVLALGLFNSIMFPTIFSLALNALGRHT-SQGSGILC----LAIVGGAIVPLLQGSLADCLGIQLAFALPVPCY 304 (310)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hhhHHHHH----HHHhcchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 2 23345668889999999998888888777643 44555542 234899999999999999999999888655443
Q ss_pred H
Q 013568 306 L 306 (440)
Q Consensus 306 ~ 306 (440)
+
T Consensus 305 ~ 305 (310)
T TIGR01272 305 L 305 (310)
T ss_pred H
Confidence 3
No 194
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.91 E-value=2.6e-08 Score=100.32 Aligned_cols=178 Identities=17% Similarity=0.235 Sum_probs=142.0
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.++.++.+++...+..+. ......++.+.++ +|++..+.+.+.++..+...+ .++.|+++|+. ..+++.+..++
T Consensus 296 ~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~---~~~~~~~~~~~ 371 (509)
T KOG2504|consen 296 KDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP---GIRALVLFLLT 371 (509)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc---ccchHHHHHHH
Confidence 344566666655555555 4555677788876 799999999999999998888 78899999984 11344455556
Q ss_pred HHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 209 GLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
.++.+++.+.+. +.+++..+...-.+.|+..+.........+.|+...++-..+.++..+..+ ++.++||.+.|++
T Consensus 372 ll~~gl~~~~~p-~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~g---i~~l~gpPiag~~ 447 (509)
T KOG2504|consen 372 LLIAGLARLFLP-FATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQG---IGALVGPPIAGLL 447 (509)
T ss_pred HHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhH---HHHHcCcccceee
Confidence 666666665555 678888888888999999999888888899999999999999999988888 9999999999999
Q ss_pred hhccc-hHHHHHHHHHHHHHHHHhheeec
Q 013568 289 VDAYG-VRFVFGVTALLPLITSGVAVLVK 316 (440)
Q Consensus 289 ~~~~g-w~~~f~i~~~~~~~~~~~~~~~~ 316 (440)
.+..| |...|+..++..+++...+++.+
T Consensus 448 ~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 448 YDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 88887 99999999998888887777666
No 195
>TIGR00898 2A0119 cation transport protein.
Probab=98.90 E-value=3.2e-08 Score=100.82 Aligned_cols=145 Identities=17% Similarity=0.123 Sum_probs=101.7
Q ss_pred cCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHHH
Q 013568 163 LHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVES-KYSAALSILLGSLSV 240 (440)
Q Consensus 163 ~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~~~ 240 (440)
++.+......+ ..+.... .++.++++|| +| ||+.+.++.++.+++.+++...... .....+..++.+++.
T Consensus 353 ~~~~~~~~~~~---~~~~~i~~~~~~~~l~dr---~g--rr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (505)
T TIGR00898 353 LGGNIYLDLFI---SGLVELPAKLITLLLIDR---LG--RRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGI 424 (505)
T ss_pred cCCChHHHHHH---HHHHHHHHHHHHHHHHHH---hC--CHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 45554333333 2333333 5567999999 45 7777777777766666655533322 134445556666777
Q ss_pred HhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhheeeccccc
Q 013568 241 AFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQV 320 (440)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~ 320 (440)
+...+....+..|.+|.+.|+.+.++.+.... +|.+++|.+.+ + ...++...+++.+++.++..+..+++||++.
T Consensus 425 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~---ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 425 TSAFQMVYLYTAELYPTVVRNLGVGVCSTMAR---VGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHHHHHHHHhcccccHHHHhhhHhHHHHHHH---HHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 77777888999999999999999888887766 99999999998 4 4466778888888887777777778888654
No 196
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.86 E-value=7.4e-08 Score=95.36 Aligned_cols=178 Identities=13% Similarity=0.059 Sum_probs=108.2
Q ss_pred ccCCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhh
Q 013568 129 VDLSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLV 206 (440)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~ 206 (440)
..++++.|.+++.|++..-. ..+..++|.|+++.++ .........+..+...+ .|++|+++|| +| +++++.
T Consensus 248 vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADR---iG--~~~vl~ 320 (462)
T PRK15034 248 VLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDK---FG--GVRVTL 320 (462)
T ss_pred HhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHh---cC--chHHHH
Confidence 34556788888888876655 3456688999888653 22222222223333344 8999999999 45 556666
Q ss_pred HHHHHHHHHHHHH-Hhhh----chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcc------c------------ccccc
Q 013568 207 LSGLLGALSWSLM-ATIV----ESKYSAALSILLGSLSVAFSDVVVDSMVVERARG------E------------SQSVS 263 (440)
Q Consensus 207 ~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~------------~r~~~ 263 (440)
++.+...++...+ .... .+.....+..+...++.|........++.+++|+ + .|...
T Consensus 321 ~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (462)
T PRK15034 321 INFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTET 400 (462)
T ss_pred HHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHH
Confidence 6655555443322 2122 1334444444444455566666777788888874 1 01123
Q ss_pred hhhhHHhhhhhhhHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHhhe
Q 013568 264 GSLQSLCWGSSAFGGIVSSYFSGSMVDAYG-VRFVFGVTALLPLITSGVAV 313 (440)
Q Consensus 264 ~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~ 313 (440)
.+..++....+.+|+++-|.+.|...+..| +...|+...+..+++.++.+
T Consensus 401 g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 401 AAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 344444445555888899988888776654 88888888888877776544
No 197
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.86 E-value=2e-07 Score=88.78 Aligned_cols=156 Identities=16% Similarity=0.123 Sum_probs=121.8
Q ss_pred HHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 013568 155 VNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSI 233 (440)
Q Consensus 155 l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (440)
...|-+.++|++..+..++.....+..++ ..++|++.|| +| -|++++.+.++..+.++... +........++-
T Consensus 275 ~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r---fg--~k~vl~~~lvi~~~~~~~~~-~~~~~~~f~i~g 348 (438)
T COG2270 275 GGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER---FG--SKPVLMIGLVILSIAALYLI-FLEGELDFWILG 348 (438)
T ss_pred HHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--CceeehHHHHHHHHHHHHHH-HccccHHHHHHH
Confidence 34455656999999998876666666565 6788999998 45 55677777666655544444 445555566677
Q ss_pred HHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHhh
Q 013568 234 LLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG-VRFVFGVTALLPLITSGVA 312 (440)
Q Consensus 234 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~ 312 (440)
++.|+..|..+....++..++.|+++-++..+++++..- .+.++||...+.+.+..| -|..+....++.++.+++.
T Consensus 349 ll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgr---a~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 349 LLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGR---AASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhh---HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 889999999999999999999999999999999998877 999999999999887655 6777777777777777777
Q ss_pred eeecccc
Q 013568 313 VLVKEQQ 319 (440)
Q Consensus 313 ~~~~e~~ 319 (440)
+++|++.
T Consensus 426 ~~v~~~~ 432 (438)
T COG2270 426 LRVKVPG 432 (438)
T ss_pred EeecCCC
Confidence 7887763
No 198
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.86 E-value=1.5e-07 Score=87.73 Aligned_cols=173 Identities=18% Similarity=0.155 Sum_probs=126.3
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++..|.+.+.+-.+... +....|+|.++.| .|+|..+.|++.++..+.... +...-.+.+|. .++|+..+...
T Consensus 207 ~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~----~n~r~~~~~~~ 281 (395)
T COG2807 207 SPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRS----KNQRPLVVLAL 281 (395)
T ss_pred CchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHh----cccchHHHHHH
Confidence 34556566555566665 7888899999999 599999999998888877666 45555666663 26788888877
Q ss_pred HHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 210 LLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
....++.+.+. +.+.... +...++.|+|.+...+..-.++.+-.++.++ +..+.++..+.+++=..+||.+.|++-
T Consensus 282 ~~~l~G~~G~~-~~P~~~~-~lw~~llG~G~G~~F~laL~li~~rs~~a~~--Aa~LSgmaQg~GYllAa~GP~l~G~lh 357 (395)
T COG2807 282 LLMLVGLVGLL-LAPGQLP-ILWALLLGLGQGGAFPLALTLILLRSSDAAI--AAALSGMAQGVGYLLAAFGPWLFGFLH 357 (395)
T ss_pred HHHHHHHHHHH-HhhhhHH-HHHHHHHhCccchHHHHHHHHHHhhcCChHH--HHHHHHHhhhhhHHHHhhhhhhHhHHH
Confidence 78888877776 3333222 2225899999999888888898888766543 445666677766677888999999999
Q ss_pred hccc-hHHHHHHHHHHHHHHHHhhe
Q 013568 290 DAYG-VRFVFGVTALLPLITSGVAV 313 (440)
Q Consensus 290 ~~~g-w~~~f~i~~~~~~~~~~~~~ 313 (440)
|..| |+...+..+...++..+.-+
T Consensus 358 Da~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 358 DATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HhcCChHHHHHHHHHHHHHHHHHHh
Confidence 8764 99888887776666655444
No 199
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.84 E-value=2.5e-07 Score=95.77 Aligned_cols=157 Identities=15% Similarity=0.164 Sum_probs=117.9
Q ss_pred HHHHHHHHHhcCCChhhhHHHHHhh-hhhHHHHhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhch------
Q 013568 153 LAVNFYLKDDLHLDPAETAVISGFS-SLPWLIKPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVES------ 225 (440)
Q Consensus 153 ~~l~~~l~~~~g~s~~~~g~~~s~~-~l~~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~------ 225 (440)
..+..|+.+.+|.+.+.+..+...+ .+.+....++|+++|++ +| |++.++++.++..++..+++..+.+
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~--lG--~~~tIl~~~ii~~lG~~llai~a~~~~~~~~ 83 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGW--LG--KFKTILYLSIVYVVGHALLSFGAIPSSGHPL 83 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hh--hHHHHHHHHHHHHHHHHHHHhccCcccccch
Confidence 3455566666899988877665554 34455566889999996 77 6666667767777776666522111
Q ss_pred -hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc-------chHHH
Q 013568 226 -KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY-------GVRFV 297 (440)
Q Consensus 226 -~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~-------gw~~~ 297 (440)
....+++..+.++|.++.-+...+...|.++++++.+..+++++.+.+.|+|.++++.+.+++.+.+ +|...
T Consensus 84 ~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~a 163 (654)
T TIGR00926 84 HDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLA 163 (654)
T ss_pred HHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHH
Confidence 1235567788889999999999999999998776666788899999999999999999999987443 69999
Q ss_pred HHHHHHHHHHHHHhhe
Q 013568 298 FGVTALLPLITSGVAV 313 (440)
Q Consensus 298 f~i~~~~~~~~~~~~~ 313 (440)
|.+.+++.++++++..
T Consensus 164 F~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 164 FGVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999988887766543
No 200
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.83 E-value=1.5e-07 Score=91.99 Aligned_cols=160 Identities=13% Similarity=0.072 Sum_probs=98.7
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
++++...+.+...... .......|.++++++|.++.+.+++.+...++..+ +++.|++.|| +| +|+.+..+..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~---~~--~~~~~~~~~~ 280 (385)
T TIGR00710 206 KMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK---WG--AKSLLRMGLI 280 (385)
T ss_pred chhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--HHHHHHHHHH
Confidence 3444444333332222 34445667778877899999999988888877776 7888999999 44 5555555555
Q ss_pred HHHHHHHHHHhhh----chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 211 LGALSWSLMATIV----ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 211 ~~~~~~~~~~~~~----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
+..++.+.+.... .....+++..++.|++.+...+.......|..| ++++++.++.+.... .+|.+.++.++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~--~~g~i~~~~~~- 356 (385)
T TIGR00710 281 LFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRL--VLGAIVGYLVS- 356 (385)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHH--HHHHHHHHHHH-
Confidence 5555444433111 223344455677888888877777788888776 567877777664443 14555555544
Q ss_pred HhhhccchHHHHHHH
Q 013568 287 SMVDAYGVRFVFGVT 301 (440)
Q Consensus 287 ~l~~~~gw~~~f~i~ 301 (440)
.+.+..+|...+...
T Consensus 357 ~~~~~~~~~~~~~~~ 371 (385)
T TIGR00710 357 LIHGNTAWPMSLSCL 371 (385)
T ss_pred hccccChHHHHHHHH
Confidence 444444555544443
No 201
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.83 E-value=1.1e-07 Score=96.65 Aligned_cols=149 Identities=16% Similarity=0.113 Sum_probs=112.2
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
.+....+..+..... ......+|.|+++.+|.++.+.|+......++..+ .++.|++.|| +| +|+.+..+.++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r---~g--~~~~~~~g~~~ 334 (495)
T PRK14995 260 IILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR---LG--LRLVATGGMAL 334 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cC--chHHHHHHHHH
Confidence 444444444444333 34455788899988899999999998888888777 7889999999 45 66677777766
Q ss_pred HHHHHHHHHhhh--chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 212 GALSWSLMATIV--ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 212 ~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
..++.+++.... .+.+...+..++.|++.+...+.....+.+..|+++++.+.++++.... +|..+|+.+.|.+.
T Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---lG~~~G~ai~g~i~ 411 (495)
T PRK14995 335 SALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYE---LGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 666655444222 3444556677889999999888888888899999999999998888877 99999999999886
Q ss_pred h
Q 013568 290 D 290 (440)
Q Consensus 290 ~ 290 (440)
+
T Consensus 412 ~ 412 (495)
T PRK14995 412 S 412 (495)
T ss_pred H
Confidence 5
No 202
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.82 E-value=1.2e-07 Score=95.94 Aligned_cols=154 Identities=12% Similarity=0.125 Sum_probs=113.7
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
+.++...+..+..++. ......+|.|+++.+|.+..+.+++.....++..+ .++.|++.||+ | ||+.+.++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~---~--~~~~~~~g~~ 329 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI---D--PRKLVTIGLI 329 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---C--cHHHHHHHHH
Confidence 3444444444444443 34455788899888899999999998888887777 78889999994 4 6667777766
Q ss_pred HHHHHHHHHHh-hh--chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 211 LGALSWSLMAT-IV--ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 211 ~~~~~~~~~~~-~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
+..++...+.. .. .+........++.|++.+...+.......+..|+++++.+.++.+.... +|+.+|+.+.+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~g~~ig~~i~g~ 406 (485)
T TIGR00711 330 LYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQ---LGGSIGTALITT 406 (485)
T ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 66666555441 11 2344556667888999988777777777888899999999998888777 999999999998
Q ss_pred hhhccch
Q 013568 288 MVDAYGV 294 (440)
Q Consensus 288 l~~~~gw 294 (440)
+.++..+
T Consensus 407 ~~~~~~~ 413 (485)
T TIGR00711 407 ILTNRTQ 413 (485)
T ss_pred HHHHHHH
Confidence 8765433
No 203
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.81 E-value=3.3e-07 Score=90.09 Aligned_cols=141 Identities=14% Similarity=0.055 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHH
Q 013568 151 ARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSA 229 (440)
Q Consensus 151 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 229 (440)
.....|.++++++|.+..+.+.+.+...++..+ .++.|++.|| +| ||+.+..+..+..++.+.+. ...+....
T Consensus 222 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r---~g--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 295 (392)
T PRK10473 222 FVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGI---FK--PRTLMLTSQVLFLAAGITLA-LSPSHAVS 295 (392)
T ss_pred HHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--HHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 334556677777899999999888777777666 7788999999 45 66677777666666655555 33333333
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHH
Q 013568 230 ALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLP 305 (440)
Q Consensus 230 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~ 305 (440)
+....+.+.+.+...+. ....+..|.++|+ +..+.... ++..+|+.+++++.+++|+.....+.+.+.
T Consensus 296 ~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~---g~~~~~~~---~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 296 LFGITLICAGFSVGFGV--AMSQALGPFSLRA---GVASSTLG---IAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHHHHHHHHHHHHHhHH--HHHHHhccCcccc---cHHHHHHH---HHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 33333333333332222 2333444544443 34444444 788888999999888888776555555433
No 204
>PRK10133 L-fucose transporter; Provisional
Probab=98.79 E-value=3e-07 Score=91.86 Aligned_cols=149 Identities=13% Similarity=0.049 Sum_probs=107.3
Q ss_pred hHHHHHHHHH-HHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 150 LARLAVNFYL-KDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 150 ~~~~~l~~~l-~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
....+++.|+ ++.+|+++.+.++....+.+++.+ .++.|++.|| +| +|+.+..+.++..+...+.. +.++.
T Consensus 276 ~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r---~g--~~~~l~~~~~~~~~~~~~~~-~~~~~- 348 (438)
T PRK10133 276 ACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR---FA--PHKVLAAYALIAMALCLISA-FAGGH- 348 (438)
T ss_pred HHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cC--HHHHHHHHHHHHHHHHHHHH-HcCCh-
Confidence 3445677775 566899999999999999998888 6788999999 45 55566666555444433333 33332
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc-hHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG-VRFVFGVTALLPL 306 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g-w~~~f~i~~~~~~ 306 (440)
..+....+.|++.+...+...+...+..+++ .+.+.++... .. +|+.++|.+.|.+.+..| -+..|++..++.+
T Consensus 349 ~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~---~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~ 423 (438)
T PRK10133 349 VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TI---IGGGIVTPVMGFVSDAAGNIPTAELIPALCFA 423 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-Hh---ccchHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 3345667899999999999999998887664 4566666653 33 688889999999999887 7888887666555
Q ss_pred HHHH
Q 013568 307 ITSG 310 (440)
Q Consensus 307 ~~~~ 310 (440)
...+
T Consensus 424 ~~~~ 427 (438)
T PRK10133 424 VIFI 427 (438)
T ss_pred HHHH
Confidence 4443
No 205
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.77 E-value=2.3e-07 Score=92.50 Aligned_cols=154 Identities=16% Similarity=0.233 Sum_probs=111.7
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.++.+..+...+++..+. .......+.|.++.+|.+ ...+.+..+..++..+ .|++++++|| +| ||+.+..+
T Consensus 223 ~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r---~g--k~~~~~~~ 296 (428)
T PF13347_consen 223 RNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKR---FG--KKKVYIIG 296 (428)
T ss_pred ccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH---cc--ceeehhhh
Confidence 345566666667766665 556666777777777766 4566666666666666 7899999999 45 66677777
Q ss_pred HHHHHHHHHHHHhhh-chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccc-------cccchhhhHHhhhhhhhHHHH
Q 013568 209 GLLGALSWSLMATIV-ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGES-------QSVSGSLQSLCWGSSAFGGIV 280 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-------r~~~~~~~~~~~~~~~~g~~i 280 (440)
.++.+++.+++.+.. ++.+..++..++.|++.+.......++++|..+.++ .|...+++++..- +|..+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k---~~~~l 373 (428)
T PF13347_consen 297 LLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIK---IGQGL 373 (428)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhH---HHHHH
Confidence 777777777666444 577888888999999999999999999999987543 2344455554444 99999
Q ss_pred HHHHHHHhhhccc
Q 013568 281 SSYFSGSMVDAYG 293 (440)
Q Consensus 281 g~~i~g~l~~~~g 293 (440)
++.+.+.+.+..|
T Consensus 374 a~~i~g~~l~~~G 386 (428)
T PF13347_consen 374 AGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHHHHHHhC
Confidence 9998888765444
No 206
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.76 E-value=3.3e-07 Score=88.87 Aligned_cols=183 Identities=11% Similarity=0.116 Sum_probs=127.0
Q ss_pred ccCCccHHHHHHHHHHHH-HhhhHHHHHHHHHHHhcC---CChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcch
Q 013568 129 VDLSPDNFAVAMVYFVQG-VLGLARLAVNFYLKDDLH---LDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRS 203 (440)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~g---~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~ 203 (440)
....+++|.+.+...... ....+....+.|.++.++ .+....|.+.++..+.=++ -.+..++.+| +| .|+
T Consensus 216 l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r---ig--~k~ 290 (412)
T PF01306_consen 216 LFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR---IG--AKN 290 (412)
T ss_dssp HTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H---HHH
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh---cC--hHh
Confidence 344557776555444332 234555567777776433 2334566665555444444 3456888888 45 777
Q ss_pred hhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhh-HHhhhhhhhHHHHHH
Q 013568 204 YLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQ-SLCWGSSAFGGIVSS 282 (440)
Q Consensus 204 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~~~~g~~ig~ 282 (440)
.++++..++.+=+++++ +.++.+.+.+...+.++-.+.......-++.+.+|++..++...+. ++..+ +|.++.+
T Consensus 291 ~Lllag~i~~iRi~~~~-~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~---~~~~i~s 366 (412)
T PF01306_consen 291 LLLLAGVIMAIRIIGSG-FATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQ---IGIIILS 366 (412)
T ss_dssp HHHHHHHHHHHHHHHHH-T--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-hhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHH---HHHHHHh
Confidence 88888888888888888 7888889999999999999999999999999999988765544442 34444 9999999
Q ss_pred HHHHHhhhccchHHHHHHHHHHHHHHHHh-heeeccccc
Q 013568 283 YFSGSMVDAYGVRFVFGVTALLPLITSGV-AVLVKEQQV 320 (440)
Q Consensus 283 ~i~g~l~~~~gw~~~f~i~~~~~~~~~~~-~~~~~e~~~ 320 (440)
.++|.+.++.|.+.+|++++.+.++..++ .+.++++++
T Consensus 367 ~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 367 PLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred hhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 99999999999999999999887766554 444554433
No 207
>PRK09848 glucuronide transporter; Provisional
Probab=98.76 E-value=1.8e-07 Score=93.74 Aligned_cols=156 Identities=13% Similarity=0.118 Sum_probs=103.7
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.++.++.+.+..++.... .......+.|+++.+|.+....++......++..+ .+++++++|| +| +|+.+.++
T Consensus 226 ~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r---~g--~~~~~~~g 300 (448)
T PRK09848 226 RNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR---IG--KKNTFLIG 300 (448)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--cHHHHHHH
Confidence 344555555544444443 34444566677777787665555444333454444 7889999999 45 66777777
Q ss_pred HHHHHHHHHHHHhhh-chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccc-------cccchhhhHHhhhhhhhHHHH
Q 013568 209 GLLGALSWSLMATIV-ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGES-------QSVSGSLQSLCWGSSAFGGIV 280 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-------r~~~~~~~~~~~~~~~~g~~i 280 (440)
.++.+++.+.+.... .+.+.+.+..++.|+|.+...+...++..|..+.++ +|...+++++... +|..+
T Consensus 301 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~k---lg~ai 377 (448)
T PRK09848 301 ALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRK---CGQAI 377 (448)
T ss_pred HHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHH---HHHHH
Confidence 777666655555222 245555666788899999999999999999987653 3666667776666 99999
Q ss_pred HHHHHHHhhhccch
Q 013568 281 SSYFSGSMVDAYGV 294 (440)
Q Consensus 281 g~~i~g~l~~~~gw 294 (440)
|+.+.+.+.+..|+
T Consensus 378 g~~i~g~~l~~~G~ 391 (448)
T PRK09848 378 GGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999887755444
No 208
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.75 E-value=6.6e-06 Score=80.76 Aligned_cols=289 Identities=16% Similarity=0.121 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH-
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL- 211 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~- 211 (440)
.+.+...++..... .+.....+.++.+-+.-+---.+.....-.+...+ +|..|.+.||. .|.+.+-.+.+.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-----~Rl~~~~~~l~~Q 78 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-----PRLKVIRTSLVVQ 78 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-----cchhhHHHHHHHH
Confidence 34566677777776 47777778888775433322222222223333333 88999999994 455554443322
Q ss_pred ---HHHHHHHHHh-hh-ch-----hHHHHHHHH---HHHHHHHhhh-hhhhHHHHhhhc---ccccccchhhhHHhhhhh
Q 013568 212 ---GALSWSLMAT-IV-ES-----KYSAALSIL---LGSLSVAFSD-VVVDSMVVERAR---GESQSVSGSLQSLCWGSS 274 (440)
Q Consensus 212 ---~~~~~~~~~~-~~-~~-----~~~~~~~~~---l~g~~~~~~~-~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~ 274 (440)
.++++.++.. +. +. .+....+.. +.|....... ....+.=.||.. .++......+.+.+...-
T Consensus 79 n~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRID 158 (432)
T PF06963_consen 79 NLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRID 158 (432)
T ss_pred HHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHH
Confidence 2222222110 11 11 112222221 2221111111 111111223321 222333344555555545
Q ss_pred hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHh-hee-------eccccccCCCcCCCCCCC---------CCccc
Q 013568 275 AFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGV-AVL-------VKEQQVLGPSRRQNLPLG---------DPSFF 337 (440)
Q Consensus 275 ~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~-~~~-------~~e~~~~~~~~~~~~~~~---------~~~~~ 337 (440)
.+.-+++|++.|.+.+..+......+.++..++..++ +++ .|+-..+++.+..+...+ .....
T Consensus 159 L~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (432)
T PF06963_consen 159 LFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSIL 238 (432)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHH
Confidence 5889999999999999899998888888877776653 222 121111111000000000 00011
Q ss_pred hhhHHHH----HHHHHHhcCcchhhhHHHHHhhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhh
Q 013568 338 ESSKQNM----FQLWEAVKQPNVFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFL 413 (440)
Q Consensus 338 ~~~~~~~----~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~ 413 (440)
+...+.. +..+..+++|.+...+.+.++|...-+....+..|. ...|+++..+|.+-....+..+.|.++++++.
T Consensus 239 ~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~TVLsf~~lmt~yl-~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~ 317 (432)
T PF06963_consen 239 KRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFTVLSFGGLMTAYL-KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLM 317 (432)
T ss_pred HHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHHHhcCcHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111112 223334577776666666666665333344443333 24599999999999999999999999999999
Q ss_pred ccCCchhHHHHHHHHH
Q 013568 414 KNVPLRKIFLANTIFG 429 (440)
Q Consensus 414 ~r~g~r~~l~~~~~~~ 429 (440)
+|+|..+.-.++...-
T Consensus 318 ~riGlvr~G~~~l~~q 333 (432)
T PF06963_consen 318 KRIGLVRAGLWSLWWQ 333 (432)
T ss_pred HHhcchhhHHHHHHHH
Confidence 9999877766655433
No 209
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.74 E-value=5.6e-07 Score=88.61 Aligned_cols=151 Identities=15% Similarity=0.031 Sum_probs=104.8
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHH
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYS 228 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 228 (440)
.....++.++++.+|.+..+.|++.+...++..+ +++.+++.|| .+ +++.+..+. +..+....+. ..++.+.
T Consensus 223 ~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~---~~--~~~~~~~g~-~~~~~~~~~~-~~~~~~~ 295 (393)
T PRK11195 223 TLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL---ET--VLRVLPAGI-LMGLVVLLMA-LQHSLLP 295 (393)
T ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC---Cc--ccchHHHHH-HHHHHHHHHH-HHhHHHH
Confidence 3344566778888999999999999888888877 6777999997 34 455555553 3333333333 3455555
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHhhhcccc-cccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 229 AALSILLGSLSVAFSDVVVDSMVVERARGES-QSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 229 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.+++.++.|++.+...+...+.+.+..|++. +|+..++.+.... +|..++..+.+.+ ..+|-+..+++.++..++
T Consensus 296 ~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 371 (393)
T PRK11195 296 AYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNEN---LAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLV 371 (393)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHH---HHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHH
Confidence 6667778899888877788888888765554 6777777776666 9999999888855 567766666665544444
Q ss_pred HHHh
Q 013568 308 TSGV 311 (440)
Q Consensus 308 ~~~~ 311 (440)
.+.+
T Consensus 372 ~~~~ 375 (393)
T PRK11195 372 ALAM 375 (393)
T ss_pred HHHH
Confidence 4443
No 210
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.67 E-value=1.6e-06 Score=86.01 Aligned_cols=279 Identities=13% Similarity=0.027 Sum_probs=149.4
Q ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCC-----ChhhhHHHHHhhhhhHHH--HhhhhhhccccCcCCCCcchhhh
Q 013568 134 DNFAVAMVYFVQGVLGLARLAVNFYLKDDLHL-----DPAETAVISGFSSLPWLI--KPLYGFISDSLPLFGYRRRSYLV 206 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~-----s~~~~g~~~s~~~l~~~~--~~~~g~l~Dr~~~~G~~rr~~l~ 206 (440)
+++...+.+|+..+.+ .+.--++|.+.+ +.+.+.++.+...++.++ .++.+++++|+ +|++++-
T Consensus 8 k~~~~~l~fF~il~~Y----~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-----~~~~lf~ 78 (472)
T TIGR00769 8 KFLPLFLMFFCILFNY----TILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-----SKEALFY 78 (472)
T ss_pred HHHHHHHHHHHHHHHH----HHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CHHHhHH
Confidence 3444455555544442 222236777766 336788888888887766 68899999994 3556655
Q ss_pred HHHHHHHHHHHHHHhhh----ch--------------------------hHHHHHHHHHHHHHHHhhhh-hhhHHHHhhh
Q 013568 207 LSGLLGALSWSLMATIV----ES--------------------------KYSAALSILLGSLSVAFSDV-VVDSMVVERA 255 (440)
Q Consensus 207 ~~~~~~~~~~~~~~~~~----~~--------------------------~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~ 255 (440)
.....+.+.+.+++++- +. .|...+..+..-+-...... ..++++.|++
T Consensus 79 ~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT 158 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 54445544444444221 00 11122333333444444444 8899999999
Q ss_pred cccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc-------c-chH----HHHHHHHHHHHHHHHhheeeccccccCC
Q 013568 256 RGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA-------Y-GVR----FVFGVTALLPLITSGVAVLVKEQQVLGP 323 (440)
Q Consensus 256 ~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~-------~-gw~----~~f~i~~~~~~~~~~~~~~~~e~~~~~~ 323 (440)
+.++-.+..++.+.+.. +|.++|+.+..++.+. . .|. ..+.+.+++..+...+..++.+....++
T Consensus 159 t~~qakRfy~l~~~gan---lg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~ 235 (472)
T TIGR00769 159 TIDEAKRFYALFGLGAN---VALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDP 235 (472)
T ss_pred CHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 99887766666665555 8888888888877621 1 242 2333333333333333333322221111
Q ss_pred CcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccccccceeeeeee---ccCCCChhh----HHHHHH
Q 013568 324 SRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHSDSAMFYFTT---NELGFTPEF----LGRVKF 396 (440)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~g~s~~~----~g~~~~ 396 (440)
...+.++..++ .+........++.++++|.++.+++++++|+.. .+.....+. ....-++.+ .|.+..
T Consensus 236 ~~~~~~~~~~k--~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~---~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~ 310 (472)
T TIGR00769 236 RSYNPALKEKK--VKPKMSTMESLKFLVSSPYILDLALLVIAYGIS---INLVEVTWKSKLKAQYPSPNEYSAFMGDFST 310 (472)
T ss_pred cccchhhcccc--CCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 10000000000 001112234456678899888888888888762 222211111 111123322 344455
Q ss_pred HHHHHHHHHHHHHHHhhccCCchhHHHHHHHHH
Q 013568 397 VTSVASLLGVGLYNGFLKNVPLRKIFLANTIFG 429 (440)
Q Consensus 397 ~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~ 429 (440)
..++..++..++.+++.+|+|.+....+.-++.
T Consensus 311 ~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~ 343 (472)
T TIGR00769 311 WTGVVSVTMMLLSGNVIRKYGWLTAALITPLVM 343 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 566666666677799999999886665544333
No 211
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.62 E-value=1.6e-07 Score=90.47 Aligned_cols=137 Identities=19% Similarity=0.242 Sum_probs=98.2
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCC-hhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLD-PAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGAL 214 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s-~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~ 214 (440)
+....+...+. .....++|.|+++++|.+ ..+.+.+.++..+...+ .++.|+++||+ | +++.+........+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~--~~~~~~~~~~~~~~ 285 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF---G--RRRRLLIAILLLIL 285 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---T--CHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C--cHHHHHHHHHHHHH
Confidence 33333444333 456778888867778999 78889888888777766 78889999994 4 44444444444444
Q ss_pred HHHHHHhhh--chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHH
Q 013568 215 SWSLMATIV--ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSS 282 (440)
Q Consensus 215 ~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~ 282 (440)
..+.+.... ++....++..++.|++.+...+....++.|..|++++++..++.+.... +|..+||
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~~~~igP 352 (352)
T PF07690_consen 286 GALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGS---LGGIIGP 352 (352)
T ss_dssp HHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH---HHHHHCC
Confidence 433333122 2345566677889999999999999999999999999999998887777 8888887
No 212
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.60 E-value=1.6e-07 Score=88.50 Aligned_cols=161 Identities=17% Similarity=0.201 Sum_probs=116.4
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhH-HHHHHHHHHHHHHhhhchh
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVL-SGLLGALSWSLMATIVESK 226 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~-~~~~~~~~~~~~~~~~~~~ 226 (440)
++..+.++.++.|.+..+.-++|+.+.-..+.|.+ .+++|.++||+ + +-|+.+.. +.+...++..... +.+++
T Consensus 287 afLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~---~-~~~wl~~~~gl~~~G~~~~~iP-~~~~~ 361 (464)
T KOG3764|consen 287 AFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY---P-HLRWLLSLGGLATVGVSSGPIP-FATSI 361 (464)
T ss_pred HHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc---C-chhHHHHHHHHHHHHHHhchhH-hhhhH
Confidence 67777888888887875555888877777888888 78999999994 4 23344433 3333334444444 66888
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccc---cchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHH
Q 013568 227 YSAALSILLGSLSVAFSDVVVDSMVVERARGESQS---VSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTAL 303 (440)
Q Consensus 227 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~ 303 (440)
.++++-++..+++.+..+.........+.+.++-. ..+..+.++..+..+|..+||.++|.+++.+|++|...+.++
T Consensus 362 ~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~ 441 (464)
T KOG3764|consen 362 AQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGI 441 (464)
T ss_pred HHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHH
Confidence 88888888888888887776666666665554433 555666666555669999999999999999999999999888
Q ss_pred HHHHHHHhhee
Q 013568 304 LPLITSGVAVL 314 (440)
Q Consensus 304 ~~~~~~~~~~~ 314 (440)
..++-.-+..+
T Consensus 442 ~n~iyapvl~l 452 (464)
T KOG3764|consen 442 LNLIYAPVLLL 452 (464)
T ss_pred HHHHHHHHHHH
Confidence 87765544433
No 213
>PRK09669 putative symporter YagG; Provisional
Probab=98.57 E-value=8.3e-07 Score=88.91 Aligned_cols=158 Identities=12% Similarity=-0.025 Sum_probs=89.8
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.++.++.++..++..... .........|.+..++ +....+.+.....++..+ .+++++++|| +| ||+.+..+
T Consensus 227 ~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r---~g--k~~~~~~~ 300 (444)
T PRK09669 227 GNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGK---FD--RVRAFKWT 300 (444)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--hHHHHHHH
Confidence 344555555555544443 2223223333333222 223333344444455445 5788999999 45 55555555
Q ss_pred HHHHHHHHHHHHhh-hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhccccc--ccc--hhhhHHhhhhhhhHHHHHHH
Q 013568 209 GLLGALSWSLMATI-VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQ--SVS--GSLQSLCWGSSAFGGIVSSY 283 (440)
Q Consensus 209 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r--~~~--~~~~~~~~~~~~~g~~ig~~ 283 (440)
.++..++...+... .++.+.+++..++.|++.+...+..+++++|..+.++. |++ +..++....+..+|..+|+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~ 380 (444)
T PRK09669 301 IVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGA 380 (444)
T ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHH
Confidence 54444332222212 34555566777889999999999999999999874331 221 12223333333499999999
Q ss_pred HHHHhhhccch
Q 013568 284 FSGSMVDAYGV 294 (440)
Q Consensus 284 i~g~l~~~~gw 294 (440)
++|++.+..|+
T Consensus 381 i~g~ll~~~Gy 391 (444)
T PRK09669 381 VVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHcCC
Confidence 99998876555
No 214
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.57 E-value=2.5e-06 Score=83.24 Aligned_cols=129 Identities=10% Similarity=0.018 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHH---Hhhhch
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLM---ATIVES 225 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~---~~~~~~ 225 (440)
....+.|.++.+.+|.+..+.+++.+...+...+ .++.|++.|| +| ||+.+..+..+..+..+.+ .....+
T Consensus 212 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r---~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
T PRK11102 212 SFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRR---VG--ALNMLRFGLWIQFIMGIWLVVSALLDLG 286 (377)
T ss_pred HHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4444567777777899999999998888887776 7888999999 45 6666665554433322221 111123
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHH
Q 013568 226 KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 226 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g 286 (440)
.+...++..+.+.+.+.........+.|..| +.++...++...... .+|..+++++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~--~~g~~~g~~~~~ 344 (377)
T PRK11102 287 FWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRF--GIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHH--HHHHHHHHHHHh
Confidence 3333333334444444444444555666655 667777666543211 266677776654
No 215
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.56 E-value=1.8e-05 Score=76.60 Aligned_cols=256 Identities=13% Similarity=0.074 Sum_probs=150.5
Q ss_pred HHHHHHHHHHh-cCCChhhhHH-HHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHH
Q 013568 152 RLAVNFYLKDD-LHLDPAETAV-ISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYS 228 (440)
Q Consensus 152 ~~~l~~~l~~~-~g~s~~~~g~-~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 228 (440)
.+.+.+|+.+. .|++..++.- +.-+..-.+.. -.+...+.|.+ |.||++++..+...+..+++. +.++...
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-----~Ykpviil~~~~~i~t~~lll-~~~sv~~ 96 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-----RYKPVIILQALSYIITWLLLL-FGTSVLA 96 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHH-HHCcHHH
Confidence 44566677664 7899888752 32222223333 45668999984 589999999888888877776 7788888
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh--ccchHHHHHHHHHHHH
Q 013568 229 AALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD--AYGVRFVFGVTALLPL 306 (440)
Q Consensus 229 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~--~~gw~~~f~i~~~~~~ 306 (440)
+-+.-++.|++.+. ..+..+++-...++++-.++.+....... +|..++.++|-.++. ...++..+++......
T Consensus 97 mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l---~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~ 172 (412)
T PF01770_consen 97 MQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATL---VGRFISSLLGQLLVSFGGVSYFQLNYISLASVS 172 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 88899999998877 46777888878777766566555555555 777777777766654 3456777777666666
Q ss_pred HHHHhheeecccccc----CCC---------cCCC-CCCCC-------------CccchhhHHHHHHHHHHhcCcchhhh
Q 013568 307 ITSGVAVLVKEQQVL----GPS---------RRQN-LPLGD-------------PSFFESSKQNMFQLWEAVKQPNVFLP 359 (440)
Q Consensus 307 ~~~~~~~~~~e~~~~----~~~---------~~~~-~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~~~~~ 359 (440)
+++++.+++|..++. +.. +.+. .+..+ .......+..++++++..++|.++..
T Consensus 173 ~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~W 252 (412)
T PF01770_consen 173 LALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLW 252 (412)
T ss_pred HHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHH
Confidence 666666677764421 000 0000 00000 00011223345667777788876555
Q ss_pred HHHHHhhhccccccceeeeeee--ccC---CCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCch
Q 013568 360 TLFVFLWQATPHSDSAMFYFTT--NEL---GFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLR 419 (440)
Q Consensus 360 ~l~~~~~~~~~~~~~~~~~~~~--~~~---g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r 419 (440)
.++-.+..+. ......|... ++. +-....-|.+-++..+.+.++.+..|++-.++.+.
T Consensus 253 SlWWa~atcg--y~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~ 315 (412)
T PF01770_consen 253 SLWWAFATCG--YYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW 315 (412)
T ss_pred HHHHHHHHhH--HHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH
Confidence 4332221110 0111111111 112 22233346666777777777788888875555443
No 216
>PRK11043 putative transporter; Provisional
Probab=98.56 E-value=3.8e-06 Score=82.82 Aligned_cols=136 Identities=11% Similarity=0.005 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHH---HHh-hhc
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSL---MAT-IVE 224 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~---~~~-~~~ 224 (440)
....+.|.++++ +|.+..+.|+......++..+ +.+.+++.|| +| +|+.+....+...++.+. ... ..+
T Consensus 221 ~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (401)
T PRK11043 221 AWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQK---WG--GEQLLPWLLVLFAVSVIAIWLASLLSHP 294 (401)
T ss_pred HHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cC--HHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 344567777766 799999999876666666655 5567889998 34 444333333332222221 111 123
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchH
Q 013568 225 SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVR 295 (440)
Q Consensus 225 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~ 295 (440)
+....++...+.|++.+...+...+...+..| ++++++.++++.... .+..+++.+.|.+.+.....
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~---~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 295 SLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQL---GLCFLASLLVSALISTPLLT 361 (401)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHH---HHHHHHHHHHHHccCCChhH
Confidence 34444555667778887777777777777765 568888888886655 78888888888887643333
No 217
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.55 E-value=5.4e-06 Score=75.25 Aligned_cols=159 Identities=16% Similarity=0.182 Sum_probs=108.7
Q ss_pred HHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhh------ch
Q 013568 152 RLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIV------ES 225 (440)
Q Consensus 152 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~------~~ 225 (440)
.....+.+++.+|+|.++...+.....++..++.+.|.+.|+ +| .+.++.++.+...++...+.... .+
T Consensus 21 Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~---~g--p~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~ 95 (250)
T PF06813_consen 21 FSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDR---FG--PWVVLLIGAVLGFVGYGLLWLAVSGRIPSLP 95 (250)
T ss_pred hhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHh---cc--hHHHHHHHHHHHHHHHHHHHHHHhCccCccc
Confidence 335566678889999999999988888888789999999999 44 77788888888888876665222 24
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHH
Q 013568 226 KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLP 305 (440)
Q Consensus 226 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~ 305 (440)
.+.+.+..++.|.+.+..+.+......+.+|+ +||.+.++.-...+ +++.+-..+...+.+.-.-...+.+.....
T Consensus 96 ~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~G---LSaai~t~i~~~~f~~~~~~fll~la~~~~ 171 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFG---LSAAIFTQIYSAFFGDDPSSFLLFLAVLPA 171 (250)
T ss_pred hHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHH---hHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 45566666777777776666666667778875 78999998887777 777666655555544422334333333334
Q ss_pred HHHHHhheeecccc
Q 013568 306 LITSGVAVLVKEQQ 319 (440)
Q Consensus 306 ~~~~~~~~~~~e~~ 319 (440)
++.++..++++..+
T Consensus 172 ~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 172 VVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHhhheeccC
Confidence 44444555555443
No 218
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.55 E-value=1.4e-06 Score=84.55 Aligned_cols=130 Identities=15% Similarity=0.171 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhh-hHHH-HhhhhhhccccCcCCCCcchhhhHHHHH
Q 013568 135 NFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSL-PWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL 211 (440)
Q Consensus 135 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l-~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~ 211 (440)
++.+.+..+..... ......+++|+++ +|.+.++.+.+.++... +..+ .+++|+++|| +| ||+.++.+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r---~g--~~~~l~~~~~~ 284 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP---LN--ILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh---hh--HHHHHHHHHHH
Confidence 44444444444443 4566788899888 89999999988776653 4445 6788999999 45 66666666666
Q ss_pred HHHHHHHHHhhh----------chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHh
Q 013568 212 GALSWSLMATIV----------ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLC 270 (440)
Q Consensus 212 ~~~~~~~~~~~~----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 270 (440)
..+...+..... ++.+.+..+.++.+++.+...+...+++.|.+|+++|++..++++..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 353 (356)
T TIGR00901 285 QALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSL 353 (356)
T ss_pred HHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 555544444222 23455667778889999999999999999999999999888877644
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.47 E-value=4.9e-06 Score=81.86 Aligned_cols=137 Identities=10% Similarity=0.021 Sum_probs=88.3
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhh-HHHHHHHHHHHHHHhh-hchh
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLV-LSGLLGALSWSLMATI-VESK 226 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~-~~~~~~~~~~~~~~~~-~~~~ 226 (440)
......+.++++.+|.+..+.+++.....++..+ ..+.+++.||+ | ++.... .......+........ ..+.
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (394)
T PRK11652 225 VFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF---S--TLMWQSVICCLLAGLLMWIPGWFGVMNV 299 (394)
T ss_pred HHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--HHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 3444566778887899999999887766666665 56778888873 2 222221 1111111111111111 2244
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchH
Q 013568 227 YSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVR 295 (440)
Q Consensus 227 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~ 295 (440)
+.+.+..++.+++.+...+....+..|..|+ +++...++.+.... +|..+++.+++.+.....+.
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~---lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 300 WTLLVPAALFFFGAGMLFPLATSGAMEPFPY-LAGTAGALLGGLQN---IGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHHHHHHH---HHHHHHHHHHHHccCCchHH
Confidence 5566677888888888888888888888874 56777777776655 99999999998876554333
No 220
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.45 E-value=5.4e-06 Score=83.66 Aligned_cols=156 Identities=17% Similarity=0.166 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHhcCCChhh----hHHHHHhhhhhHHH-Hhhhh----hhccccCcCCCCcchhh--hHHHHHHHHHHHH
Q 013568 150 LARLAVNFYLKDDLHLDPAE----TAVISGFSSLPWLI-KPLYG----FISDSLPLFGYRRRSYL--VLSGLLGALSWSL 218 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~----~g~~~s~~~l~~~~-~~~~g----~l~Dr~~~~G~~rr~~l--~~~~~~~~~~~~~ 218 (440)
-..+.++.+.++..+.+... .+++.++..+...+ +|+.. ++.||- . +.+... .++.++..++...
T Consensus 290 Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~--~--~~~~~~k~~~G~~l~~~~~~~ 365 (475)
T TIGR00924 290 QMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKG--K--DPTTPLKFTLGMLFCGASFLT 365 (475)
T ss_pred HhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCC--C--CCCcHHHHHHHHHHHHHHHHH
Confidence 33444566665543433222 55666666655544 66544 455541 1 123333 5666777666655
Q ss_pred HHhh--------hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 219 MATI--------VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 219 ~~~~--------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
++.. ..+.+.+++..++.++|.....+...+++.+..|++.||++++++..... +|..+++.+......
T Consensus 366 ~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~---~g~~l~~~~~~~~~~ 442 (475)
T TIGR00924 366 FAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQA---MGSLLGGYLATFGAV 442 (475)
T ss_pred HHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhc
Confidence 5421 35778888999999999999999999999999999999999999988887 999999888887776
Q ss_pred ccchHHHHHHHHHHHHHHHHhh
Q 013568 291 AYGVRFVFGVTALLPLITSGVA 312 (440)
Q Consensus 291 ~~gw~~~f~i~~~~~~~~~~~~ 312 (440)
..+|.+.|...++..++..++.
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 443 PQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred ccchhhHHHHHHHHHHHHHHHH
Confidence 6788888888887766655543
No 221
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.44 E-value=2.4e-06 Score=79.79 Aligned_cols=124 Identities=15% Similarity=0.115 Sum_probs=90.6
Q ss_pred hhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchh
Q 013568 186 LYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGS 265 (440)
Q Consensus 186 ~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 265 (440)
+.+++.|| +| ||+.|.++.+++.++.+++. .+.+.....+..+..-++.+....+.+.+..|++|...|+.+.+
T Consensus 400 It~~iver---lG--RKkTMal~l~~f~iflfll~-~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvG 473 (528)
T KOG0253|consen 400 ITGVIVER---LG--RKKTMALSLILFGIFLFLLT-TCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVG 473 (528)
T ss_pred HHHHHHHH---hc--chhHHHHHHHHHHHHHHHHH-HhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchh
Confidence 55999999 56 89999999888888877766 34433344444455556666666688899999999999999999
Q ss_pred hhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhheeeccccc
Q 013568 266 LQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAVLVKEQQV 320 (440)
Q Consensus 266 ~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~ 320 (440)
..+.+.. +|+++.|+++ +.....-..+..+.+.+.+++.+..+++|-+++
T Consensus 474 tcSsmaR---IggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 474 TCSSMAR---IGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhhhHHh---hhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 8888777 9999999998 333333344455556666677777777775543
No 222
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.40 E-value=1.1e-05 Score=81.44 Aligned_cols=154 Identities=14% Similarity=0.131 Sum_probs=93.2
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
++.++.+...++..... .......+.|.+. ..-+....+++.++..++..+ .+++++++|| +| ||+.+.++.
T Consensus 230 n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y-~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r---~g--kk~~~~~~~ 303 (473)
T PRK10429 230 NDQLSCLLGMALAYNIASNIINGFAIYYFTY-VIGDADLFPYYLSYAGAANLVTLILFPRLVKS---LS--RRILWAGAS 303 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhheeeEEEE-ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cC--cHHHHHHHH
Confidence 34455555555544444 3333344434443 333455566666555566555 7888999999 45 666666655
Q ss_pred HHHHHHHHHHHh----hhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccc--c-----ccchhhhHHhhhhhhhHH
Q 013568 210 LLGALSWSLMAT----IVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGES--Q-----SVSGSLQSLCWGSSAFGG 278 (440)
Q Consensus 210 ~~~~~~~~~~~~----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--r-----~~~~~~~~~~~~~~~~g~ 278 (440)
++.+++.+.+.. ..++.+.+++..++.|++.+...+...++++|..+.++ . |...+..++..- +|.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K---~~~ 380 (473)
T PRK10429 304 IFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVK---GGS 380 (473)
T ss_pred HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHH---HHH
Confidence 554444333321 12344555666678889999888899999999976432 2 223444444444 899
Q ss_pred HHHHHHHHHhhhccch
Q 013568 279 IVSSYFSGSMVDAYGV 294 (440)
Q Consensus 279 ~ig~~i~g~l~~~~gw 294 (440)
.+|+.+.|++.+..|+
T Consensus 381 al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 381 AFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999988765443
No 223
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.37 E-value=3.4e-06 Score=81.90 Aligned_cols=133 Identities=18% Similarity=0.113 Sum_probs=84.1
Q ss_pred CccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHH
Q 013568 132 SPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSG 209 (440)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~ 209 (440)
+++++.+.+.++..... .....+.+.|+++.+|.+..+.+++.++..+...+ .+++|+++|| +| ||+.+..+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r---~g--~~~~~~~~~ 298 (366)
T TIGR00886 224 DRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR---LG--GARKLLMSF 298 (366)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh---hc--cchhHHHHH
Confidence 34555555555444333 45566788899888999999999888777777666 7788999999 45 444444443
Q ss_pred HHHHHHHHHHHhh-hc--hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHh
Q 013568 210 LLGALSWSLMATI-VE--SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLC 270 (440)
Q Consensus 210 ~~~~~~~~~~~~~-~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 270 (440)
.....+..++... .+ +....++..++.+++.+.......+++.+..| ++++...++.+..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~ 361 (366)
T TIGR00886 299 LGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAI 361 (366)
T ss_pred HHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHh
Confidence 3443433333312 22 44444555566666666666677788888887 4667666665543
No 224
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.33 E-value=2.8e-05 Score=74.01 Aligned_cols=147 Identities=18% Similarity=0.258 Sum_probs=107.0
Q ss_pred hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 149 GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 149 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
....++++.|+.+..|++..+.+...+.+..+..+ ..+..++..|+ +..+++.+..+...+.++..+ +.++.
T Consensus 253 va~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-----~~~k~Laf~a~~~ill~~~~~-l~~g~- 325 (422)
T COG0738 253 VAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-----KPEKYLAFYALIAILLLLAVA-LIGGV- 325 (422)
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CHHHHHHHHHHHHHHHHHHHH-HhcCh-
Confidence 57888999999987799999999998888888888 66777777785 344555555444444444444 45553
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
..+.+.++.|++.+...|...+...+..+ ++-....++..+ .. +|+.+.|.+-|++.+..|-...+.+...++.+
T Consensus 326 v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~m-ai---vGGAiiP~l~G~i~d~~g~~~~~~~~pllc~l 400 (422)
T COG0738 326 VALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVM-AI---VGGAIIPPLQGVIADMFGIQLTFLIVPLLCYL 400 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeee-he---ecchHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 44556688999999999999999999988 333444444433 34 89999999999999999988887754444433
No 225
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.32 E-value=2.7e-06 Score=83.31 Aligned_cols=165 Identities=16% Similarity=0.148 Sum_probs=126.1
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALS 215 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~ 215 (440)
+++..+..|.. +...+.+--+++| ++-.+...|.....-..+-++ -++.+++.+| .| +-.++.+++....+=
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k---iG--Hv~v~~lgLa~~~~R 449 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEK---IG--HVNVMYLGLACNVGR 449 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHH---hc--ccceeeehhhHHHHH
Confidence 33444444554 5666677677777 676677777443333344333 4566999998 45 777888888888777
Q ss_pred HHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhH-HhhhhhhhHHHHHHHHHHHhhhccch
Q 013568 216 WSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQS-LCWGSSAFGGIVSSYFSGSMVDAYGV 294 (440)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~~g~~ig~~i~g~l~~~~gw 294 (440)
++.+. ...|.|+.+-.-+++|+..+....+..+++++..|++.+..+.++.. ...+ +|--+|.+++|.+.+.+|-
T Consensus 450 f~~~S-~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~G---lG~g~GslIGG~~v~~fg~ 525 (618)
T KOG3762|consen 450 FLYYS-YLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHG---LGKGLGSLIGGFVVERFGA 525 (618)
T ss_pred HHHHH-HhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcc---cCcchhhhhhhhhheeehh
Confidence 77777 67888999999999999999999999999999999999888877664 4445 8889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 013568 295 RFVFGVTALLPLITSGVA 312 (440)
Q Consensus 295 ~~~f~i~~~~~~~~~~~~ 312 (440)
+..|.+.++.+++.++..
T Consensus 526 ~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 526 RTTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999888777766543
No 226
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.26 E-value=2.4e-05 Score=76.86 Aligned_cols=155 Identities=13% Similarity=0.157 Sum_probs=104.1
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.++.+..+++.+++.... .+.......|.+..+|-+.....+.......+..+ .+++..+++| +| ||+.+.++
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~---~g--kk~~~~~~ 308 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK---FG--KKKLFLIG 308 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH---hc--hHHHHHHH
Confidence 444555555555555555 45555566666655666666666655555555555 5788999998 56 77777788
Q ss_pred HHHHHHHHHHHHhhh-chhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccc-------cccchhhhHHhhhhhhhHHHH
Q 013568 209 GLLGALSWSLMATIV-ESKYSAALSILLGSLSVAFSDVVVDSMVVERARGES-------QSVSGSLQSLCWGSSAFGGIV 280 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-------r~~~~~~~~~~~~~~~~g~~i 280 (440)
.++.+++.+++.+.. ++...+++..++.+++.+...+..+++++|..+-+| -|...+.+.+..= +|..+
T Consensus 309 ~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K---~g~al 385 (467)
T COG2211 309 LLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRK---LGLAL 385 (467)
T ss_pred HHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHH---HHHHH
Confidence 888887777766444 356667777899999999999999999999886532 2222333333333 88888
Q ss_pred HHHHHHHhhhccc
Q 013568 281 SSYFSGSMVDAYG 293 (440)
Q Consensus 281 g~~i~g~l~~~~g 293 (440)
+..+.|++....|
T Consensus 386 a~~~~g~~L~~~G 398 (467)
T COG2211 386 AGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHcC
Confidence 8888888765443
No 227
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.24 E-value=5.5e-05 Score=74.92 Aligned_cols=147 Identities=10% Similarity=0.034 Sum_probs=95.3
Q ss_pred hHHHHHHHHHHHh-cCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH
Q 013568 150 LARLAVNFYLKDD-LHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY 227 (440)
Q Consensus 150 ~~~~~l~~~l~~~-~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~ 227 (440)
.....++.|.++. .+.+....+...+.+...+.+ ..+.|++.||+ + +|+++.+..++..++.++.. ..++..
T Consensus 250 ~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~---~--~~~~l~i~~~~~~~~~ll~~-~~~~~~ 323 (410)
T TIGR00885 250 MCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL---A--AHKVLMAYAIIGMALCLGSI-FAGGHV 323 (410)
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---C--HHHHHHHHHHHHHHHHHHHH-HcCChH
Confidence 4456788888653 134444444445555555556 67889999994 3 55566666556555555554 444433
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc------chHHHHHHH
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY------GVRFVFGVT 301 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~------gw~~~f~i~ 301 (440)
.+.+.++.|++.+...+...++..+..+++... ..+... +.. +|+.++|.+.|++.|.. +.+..|++.
T Consensus 324 -~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~-~s~~l~-~~~---~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~ 397 (410)
T TIGR00885 324 -GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKY-GAAGLV-MAI---IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILP 397 (410)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hHHHHH-HHH---hccchHHHHHHHHHHHhcccccCccchHHHHH
Confidence 356667788888888889999998888776532 222222 223 89999999999999854 477888876
Q ss_pred HHHHHHH
Q 013568 302 ALLPLIT 308 (440)
Q Consensus 302 ~~~~~~~ 308 (440)
.++.+..
T Consensus 398 ~~~~~~~ 404 (410)
T TIGR00885 398 LLCFAVI 404 (410)
T ss_pred HHHHHHH
Confidence 5554443
No 228
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.23 E-value=4.6e-05 Score=75.59 Aligned_cols=168 Identities=8% Similarity=-0.087 Sum_probs=96.4
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.++.++...+.++..... .......|.++++.+|.+..+.++.......+..+ ..+.+.+.++. + ++|.. ...
T Consensus 216 ~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~---~-~~~~~-~~~ 290 (413)
T PRK15403 216 RNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP---T-EPRFI-WRA 290 (413)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC---C-chhHH-HHH
Confidence 345666555554444443 34555678888888899999999986656666555 55666655431 1 23332 111
Q ss_pred HHHHHHHHHHHH----hhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 209 GLLGALSWSLMA----TIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 209 ~~~~~~~~~~~~----~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
..+..++.+++. ...++....++..++.++|.+...+......- .-.+..+|++.++.+.... .+..+++..
T Consensus 291 ~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~---~~~~~~~~~ 366 (413)
T PRK15403 291 VPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVIL---MVMAVSVEI 366 (413)
T ss_pred HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHH---HHHHHHHHH
Confidence 112222211111 11233333456667778887776665554221 2223356888888877666 778888888
Q ss_pred HHHhhhccchHHHHHHHHHHHHHH
Q 013568 285 SGSMVDAYGVRFVFGVTALLPLIT 308 (440)
Q Consensus 285 ~g~l~~~~gw~~~f~i~~~~~~~~ 308 (440)
++++.++ +-++.|...+++..+.
T Consensus 367 ~g~~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 367 GRWLWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHc-CCchHHHHHHHHHHHH
Confidence 8888664 5667776665554443
No 229
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.22 E-value=0.00011 Score=68.33 Aligned_cols=149 Identities=25% Similarity=0.274 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHHhcCCCh--hhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhc--
Q 013568 150 LARLAVNFYLKDDLHLDP--AETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVE-- 224 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~--~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~-- 224 (440)
......+.+..+ ++.+. ...++..+...++..+ .+++|.++|| +| ||+.+..+.....++.+..+ +..
T Consensus 20 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~g--~~~~~~~~~~~~~~~~~~~~-~~~~~ 92 (338)
T COG0477 20 LLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR---YG--RRKVLIIGLLLFLLGTLLLA-LAPNV 92 (338)
T ss_pred hHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccc---cc--chHHHHHHHHHHHHHHHHHH-hCccc
Confidence 444455555555 45555 4788888888888877 5788999998 36 55566655544344433444 333
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcc-cccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc--cchHHHHHHH
Q 013568 225 SKYSAALSILLGSLSVAFSDVVVDSMVVERARG-ESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA--YGVRFVFGVT 301 (440)
Q Consensus 225 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~--~gw~~~f~i~ 301 (440)
....+++.|++.|++.+...+...+++.|+.++ ++|+...+..... ...+|.++++.+++.+... .+|++.|.+.
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLG--AGALGLALGPLLAGLLLGALLWGWRAAFLLA 170 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 477788888889999999999999999999987 5566665655542 2237888888777776643 5799977776
Q ss_pred HHHHHH
Q 013568 302 ALLPLI 307 (440)
Q Consensus 302 ~~~~~~ 307 (440)
......
T Consensus 171 ~~~~~~ 176 (338)
T COG0477 171 ALLGLL 176 (338)
T ss_pred HHHHHH
Confidence 655543
No 230
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.21 E-value=7.4e-05 Score=71.62 Aligned_cols=157 Identities=18% Similarity=0.222 Sum_probs=117.7
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHh-hhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHH--hhhchh
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKP-LYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMA--TIVESK 226 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~-~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~--~~~~~~ 226 (440)
.-...+.||-.+.||++..+...+......+..++. +.|++..| +.| ++....++....++++.++. ....+.
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~--~~~--~~~~a~~G~~~~~~~f~lii~a~~~~~~ 301 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR--RLG--KKRTAALGCLLGALAFALIILAGPLGSP 301 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCC--chHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 344456788889999999999999888888887755 55888775 244 44455556555555544433 233566
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc----------cchHH
Q 013568 227 YSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA----------YGVRF 296 (440)
Q Consensus 227 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~----------~gw~~ 296 (440)
+.+....++.|++.|......-+.+.|+..+++.|.+++.++.... ++..+|..++|.+.|. .+|..
T Consensus 302 ~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA---~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~ 378 (403)
T PF03209_consen 302 WLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQA---IARGLGTFLGGALRDLVRALFGNSPALAYGV 378 (403)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhccCCcchHHHH
Confidence 7778888999999999999999999999999999999999988887 8888888888877542 35778
Q ss_pred HHHHHHHHHHHHHHhhe
Q 013568 297 VFGVTALLPLITSGVAV 313 (440)
Q Consensus 297 ~f~i~~~~~~~~~~~~~ 313 (440)
+|.+.+++.++++++..
T Consensus 379 VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 379 VFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888777666655443
No 231
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.21 E-value=3.1e-08 Score=99.29 Aligned_cols=130 Identities=21% Similarity=0.130 Sum_probs=80.9
Q ss_pred HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHH---hh-hch----hHHHHHHHHHHHHHHH-hhhhhhhHHHHhh
Q 013568 184 KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMA---TI-VES----KYSAALSILLGSLSVA-FSDVVVDSMVVER 254 (440)
Q Consensus 184 ~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~---~~-~~~----~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~ 254 (440)
..+...++|| +| ||+.++.+..+.+++.+.++ .. .++ ....+++..+...+.+ ...+..+.+..|+
T Consensus 303 ~~~~~~~~~~---~G--Rr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~El 377 (451)
T PF00083_consen 303 TLLAIFLIDR---FG--RRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAEL 377 (451)
T ss_pred cccccccccc---cc--cccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccc
Confidence 3455699999 45 77777777776666655443 11 111 1111222222222222 3345666888999
Q ss_pred hcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH-hheeecccccc
Q 013568 255 ARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSG-VAVLVKEQQVL 321 (440)
Q Consensus 255 ~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~ 321 (440)
+|.+.|+++.++...... ++.++++.+...+.+..+-...|++.+++.++..+ ..+++||++..
T Consensus 378 fPt~~R~~~~~~~~~~~~---i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 378 FPTKVRSTGIGLSYAVGR---IGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGK 442 (451)
T ss_pred cccccccccccccccccc---ccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCC
Confidence 999999988887776655 88888888888777766634445555555555444 66789998763
No 232
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.15 E-value=6.7e-06 Score=82.83 Aligned_cols=149 Identities=14% Similarity=0.091 Sum_probs=105.3
Q ss_pred HhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhh---------chhHHHH
Q 013568 161 DDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIV---------ESKYSAA 230 (440)
Q Consensus 161 ~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~ 230 (440)
+.+|.++.+.|++.....++..+ ..+.+.+.+| ++ .|+.+.++.++.+++........ ++...++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~---~~--~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~ 355 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT---FP--YRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVL 355 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh---CC--HHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeee
Confidence 45899999999998888777766 5667888777 44 67777777666666543321111 2223445
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc-----hHHHHHHHHHH-
Q 013568 231 LSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG-----VRFVFGVTALL- 304 (440)
Q Consensus 231 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g-----w~~~f~i~~~~- 304 (440)
..-++.+++.+....+...++.+..|++.+++..++.+.... +|..+++.++|++.++.| ++..+....+.
T Consensus 356 ~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~---lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~ 432 (468)
T TIGR00788 356 GDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILH---LGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHS 432 (468)
T ss_pred ehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHH---HHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHH
Confidence 556788888888888999999999999999988888876666 999999999999988776 54444433333
Q ss_pred --HHHHHHhheeecc
Q 013568 305 --PLITSGVAVLVKE 317 (440)
Q Consensus 305 --~~~~~~~~~~~~e 317 (440)
.++.+...+++|+
T Consensus 433 ~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 433 LAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHhCCC
Confidence 3333334447785
No 233
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.12 E-value=7.9e-05 Score=66.83 Aligned_cols=255 Identities=15% Similarity=0.119 Sum_probs=130.0
Q ss_pred HHHHHhcCCChhhhHHHHHhhhhh-HHHHhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 013568 157 FYLKDDLHLDPAETAVISGFSSLP-WLIKPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILL 235 (440)
Q Consensus 157 ~~l~~~~g~s~~~~g~~~s~~~l~-~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (440)
.|+.+.+|....++|.+.-...-. ..++-+.|-++|+ .| ||+.-+.-.+...+++ +.-.++.+-.++++|.+
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk---qG--RKracvtycitYiLsC--iTKhSpqYkVLmVGR~L 133 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK---QG--RKRACVTYCITYILSC--ITKHSPQYKVLMVGRVL 133 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhh---hc--cccceeeehHHHHHHH--HhhcCCceEEEeehhhh
Confidence 445566899999988763332222 2337788999998 56 5544444334444442 22134566678999999
Q ss_pred HHHHHHhhhhhhhHH-HHhhhcccccccchh----hhHHhhhhh-hhHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHH
Q 013568 236 GSLSVAFSDVVVDSM-VVERARGESQSVSGS----LQSLCWGSS-AFGGIVSSYFSGSMVDAY--GVRFVFGVTALLPLI 307 (440)
Q Consensus 236 ~g~~~~~~~~~~~~~-~~~~~~~~~r~~~~~----~~~~~~~~~-~~g~~ig~~i~g~l~~~~--gw~~~f~i~~~~~~~ 307 (440)
.|+..+....+.-++ +.|..+ +|+.-.- .++-....+ -+-.+++.+.+-.+++.+ |.-.+|-..+.+..+
T Consensus 134 GGiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLai 211 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAI 211 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHH
Confidence 999999877777665 445442 3332221 222122101 133445555555566654 445556555544444
Q ss_pred HHHhhe-eeccccccCCCcCCCCCCCCCccchhhHHHHHH-HHHHhcCcchhhhHHHHHhhhccccccceeeeeeeccCC
Q 013568 308 TSGVAV-LVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQ-LWEAVKQPNVFLPTLFVFLWQATPHSDSAMFYFTTNELG 385 (440)
Q Consensus 308 ~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g 385 (440)
+..+.+ -..|+..++. +. +.....++. ...+..++++..+..+-.++-. ....+.+..+..+.
T Consensus 212 gmAvil~~W~ENygdps-~~-----------kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~---smytFVFLWTPaLs 276 (454)
T KOG4332|consen 212 GMAVILSSWSENYGDPS-EN-----------KDLLTQFKGAARAIASDEKIALLGAIQSLFEG---SMYTFVFLWTPALS 276 (454)
T ss_pred HHHHHHhhhhhccCChh-hh-----------HHHHHHhhHhHHHHhcchHHHHHHHHHHHHhh---hhheeeeeecccCC
Confidence 433332 2334322111 11 112222222 2233456665554433333322 12222122222232
Q ss_pred CChhh--HHHHHHHHHHHHHHHHHHHHHhhccC--CchhHHHHHHHHHHHHhhh
Q 013568 386 FTPEF--LGRVKFVTSVASLLGVGLYNGFLKNV--PLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 386 ~s~~~--~g~~~~~~~i~~~~g~~~~~~l~~r~--g~r~~l~~~~~~~~~~~~~ 435 (440)
-++.. -|.+++.+..+.++|.-+..++..|- .....+.+..++.++..++
T Consensus 277 pn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~L 330 (454)
T KOG4332|consen 277 PNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLL 330 (454)
T ss_pred CCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHH
Confidence 22222 37888889999999999998887543 3344555544444444333
No 234
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.09 E-value=7.9e-06 Score=81.81 Aligned_cols=177 Identities=16% Similarity=0.152 Sum_probs=102.7
Q ss_pred CCcccccccCCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCC
Q 013568 122 NGAKFFGVDLSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGY 199 (440)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~ 199 (440)
++..+......+++|..++.+++.... +.+..++|.++++..|.|..+.+.+...+.++.++ .++.|+++||.....
T Consensus 262 ~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~- 340 (495)
T KOG2533|consen 262 KWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF- 340 (495)
T ss_pred CHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-
Confidence 344455556777899999999988887 67888999999985579999999888878777777 678899999931001
Q ss_pred CcchhhhHHHHH-HHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhccccccc-chhhhHHhhhhhhhH
Q 013568 200 RRRSYLVLSGLL-GALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSV-SGSLQSLCWGSSAFG 277 (440)
Q Consensus 200 ~rr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~~~~g 277 (440)
++|........+ ..++.+.+. ............+....+.....+.......+....+.|.. ..+....+. ++.|
T Consensus 341 ~~~~~~~~~~~~~~~~g~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~--~s~~ 417 (495)
T KOG2533|consen 341 ARRLLFIVFLCLYAIIGAISLL-AAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGT--GSAG 417 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcch--hHHH
Confidence 244443333333 333333333 22223333333333444444455566666666665544332 122222221 2233
Q ss_pred HHHHHHHHHHhhhccchHHHHHHHH
Q 013568 278 GIVSSYFSGSMVDAYGVRFVFGVTA 302 (440)
Q Consensus 278 ~~ig~~i~g~l~~~~gw~~~f~i~~ 302 (440)
.+.++..-+.....++|.+.|+...
T Consensus 418 ~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 418 AISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred HhhhhhcccccCcchhhhhHHHHHH
Confidence 3334444444455678988885443
No 235
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.07 E-value=9.7e-06 Score=78.08 Aligned_cols=127 Identities=16% Similarity=0.077 Sum_probs=94.7
Q ss_pred hhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhch-h---HHHHHHHHHHH-HHHHhhhhhhhHHHHhhhccccc
Q 013568 186 LYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVES-K---YSAALSILLGS-LSVAFSDVVVDSMVVERARGESQ 260 (440)
Q Consensus 186 ~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~l~g-~~~~~~~~~~~~~~~~~~~~~~r 260 (440)
+...++|+ .| ||+..+.+.+++.+..+.++ ...+ . ....++..+.. ++.-........+.+|.+|.+-|
T Consensus 367 ~tv~~id~---iG--Rk~iq~~GF~~~~i~~~~~~-~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR 440 (538)
T KOG0252|consen 367 FTVYFIDI---IG--RKYIQLMGFFIMTIFFFVIA-GPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVR 440 (538)
T ss_pred EEEEEeeh---hh--hHHHHHhhHHHHHHHHHHHc-CCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHh
Confidence 45888998 45 88888888888888777666 4333 1 11223332322 33334555667788999999999
Q ss_pred ccchhhhHHhhhhhhhHHHHHHHHHHHhhh-----ccchHHHHHHHHHHHHHHHHhheeecccccc
Q 013568 261 SVSGSLQSLCWGSSAFGGIVSSYFSGSMVD-----AYGVRFVFGVTALLPLITSGVAVLVKEQQVL 321 (440)
Q Consensus 261 ~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~-----~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~ 321 (440)
+..-++.....= +|.++|.....++.+ ..|.+++|++.+++.++..+..+++||++..
T Consensus 441 ~t~hGIsAA~GK---~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~ 503 (538)
T KOG0252|consen 441 STCHGISAASGK---AGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGK 503 (538)
T ss_pred hhhhhHHHHhcc---chHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeeccccc
Confidence 988777765555 999999999999988 7789999999999999998888999987654
No 236
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.02 E-value=0.00015 Score=73.81 Aligned_cols=135 Identities=10% Similarity=0.019 Sum_probs=86.5
Q ss_pred hHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchhhhHHHHHHHHHHHHHHhhhch---------hHHHHHHHHHHHH
Q 013568 170 TAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSYLVLSGLLGALSWSLMATIVES---------KYSAALSILLGSL 238 (440)
Q Consensus 170 ~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~g~ 238 (440)
.+++.++..+...+ +|+.+++-+|. .+.+ ....+.++.++.+++++.++ .... .+.++...++.++
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~--~~~~~~~G~~l~~l~f~~l~-~~~~~~~~~~~vs~~~~~~~~~l~~~ 394 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLP--MPHKFAIGMVLCSGAFLVLP-LGAKFANDAGIVSVNWLIASYGLQSI 394 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCC--cHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCccCHHHHHHHHHHHHH
Confidence 44555555544444 56554443332 0122 34456667777777766655 3322 3467888999999
Q ss_pred HHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh----------hccchHHHHHHHHHHHHHH
Q 013568 239 SVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV----------DAYGVRFVFGVTALLPLIT 308 (440)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~----------~~~gw~~~f~i~~~~~~~~ 308 (440)
|.....+...+++.+..|++.||+.++++..... +|..++..+.+... ...+..+.|...++..++.
T Consensus 395 ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a---~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 471 (500)
T PRK09584 395 GELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTA---GAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVI 471 (500)
T ss_pred HHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987765555 55555555543221 0123677887777666544
Q ss_pred HH
Q 013568 309 SG 310 (440)
Q Consensus 309 ~~ 310 (440)
.+
T Consensus 472 a~ 473 (500)
T PRK09584 472 AV 473 (500)
T ss_pred HH
Confidence 43
No 237
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.99 E-value=0.00021 Score=70.38 Aligned_cols=241 Identities=13% Similarity=0.039 Sum_probs=136.0
Q ss_pred hhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhh
Q 013568 176 FSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVER 254 (440)
Q Consensus 176 ~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 254 (440)
+....+.+ +.+.+.+.|++ | .|..++++........... +-.|.+.+++.-.+.|+|.+........++++.
T Consensus 58 iiY~~ftv~~l~~psiv~~i---~--~K~~lv~ga~~y~~f~~gf--l~~N~y~~yfssallG~Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 58 IIYAFFTVSCLFAPSIVNFL---G--PKWALVIGATCYAAFPLGF--LFPNSYYLYFSSALLGFGAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHhhHHHHHHh---h--HHHHHHHHhHHHHHHHHHH--HhcchHHHHHHHHHhhhhHHheecccceehhhc
Confidence 33444444 66779999984 4 8888888887777665444 345667788888999999999998999999999
Q ss_pred hcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc--------cchH-H----------HHHHHHHH---HHHHHHhh
Q 013568 255 ARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA--------YGVR-F----------VFGVTALL---PLITSGVA 312 (440)
Q Consensus 255 ~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~--------~gw~-~----------~f~i~~~~---~~~~~~~~ 312 (440)
.+++.+.+..++. |+.+..+.++|..+-..+... .+-+ + +..+.+++ ..+..+..
T Consensus 131 st~~tie~Nisi~---Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~ 207 (461)
T KOG3098|consen 131 STRETIERNISIF---WAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINF 207 (461)
T ss_pred CChhhHHHHHHHH---HHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhe
Confidence 9988877655444 443336666665444333211 1111 0 11111111 11222223
Q ss_pred eeeccccccCCCcCCCCCCCCCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhhccccccc-eee--eeeeccCCCChh
Q 013568 313 VLVKEQQVLGPSRRQNLPLGDPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQATPHSDS-AMF--YFTTNELGFTPE 389 (440)
Q Consensus 313 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~-~~~--~~~~~~~g~s~~ 389 (440)
.+.|.+......+..+ +...+.++...+++++|+...+..+.+..++...... .++ +..+...+.+..
T Consensus 208 ~~~p~~~~~~~~~~~~---------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~ 278 (461)
T KOG3098|consen 208 DFLPSKDVVNCKSSSE---------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTT 278 (461)
T ss_pred eecCccchhhhhhhcc---------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcch
Confidence 3444322211111100 2456677778888888886665543333322110111 111 111123444433
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHhhc---cCCchhHHHHHHHHHHHHhhh
Q 013568 390 -FLGRVKFVTSVASLLGVGLYNGFLK---NVPLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 390 -~~g~~~~~~~i~~~~g~~~~~~l~~---r~g~r~~l~~~~~~~~~~~~~ 435 (440)
..+......+++.+++....+.+.+ ++|++..+.++.++..+.+++
T Consensus 279 ~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~l 328 (461)
T KOG3098|consen 279 YLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLL 328 (461)
T ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHH
Confidence 3456667788888888888887764 467777777766655554443
No 238
>PRK11462 putative transporter; Provisional
Probab=97.95 E-value=0.00025 Score=71.39 Aligned_cols=155 Identities=12% Similarity=-0.042 Sum_probs=82.0
Q ss_pred ccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHH
Q 013568 133 PDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGL 210 (440)
Q Consensus 133 ~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~ 210 (440)
+.+..+...+++.... .........|.+..+|. ....+.+.+++.++..+ .+++++++|| +| ||..+..+..
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r---~g--kk~~~~~~~~ 301 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDW---KC--KVTIFWWTNA 301 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--hHHHHHHHHH
Confidence 3444444444444444 33333344444443443 33445555556666555 6788999999 45 4544443333
Q ss_pred HHHHHHHHHHhhhc-hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhccc-----ccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 211 LGALSWSLMATIVE-SKYSAALSILLGSLSVAFSDVVVDSMVVERARGE-----SQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 211 ~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-----~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
+..+..+++..... +...+++..++.|++.+...+..++++.|..+.+ +|.... .++....+..+|..+|+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~-~~a~~~f~~Klg~alg~~i 380 (460)
T PRK11462 302 LLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGI-SFAGTLFVLKLGLAFGGAL 380 (460)
T ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHH-HHHHHHHHHHHHHHHHHHH
Confidence 33232222221222 2223344456677777777777788888887632 222221 1233233445899999988
Q ss_pred HHHhhhccch
Q 013568 285 SGSMVDAYGV 294 (440)
Q Consensus 285 ~g~l~~~~gw 294 (440)
+|++.+..|+
T Consensus 381 ~g~iL~~~Gy 390 (460)
T PRK11462 381 IGWMLAYGGY 390 (460)
T ss_pred HHHHHHHcCC
Confidence 8887754443
No 239
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.86 E-value=0.00071 Score=67.75 Aligned_cols=127 Identities=15% Similarity=0.156 Sum_probs=92.0
Q ss_pred hhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhc---h-----------------hHHHHHHHHHHHHHHHhhhh
Q 013568 186 LYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVE---S-----------------KYSAALSILLGSLSVAFSDV 245 (440)
Q Consensus 186 ~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~l~g~~~~~~~~ 245 (440)
+.-++.++ +| +||.+..++.++.+++.....+... + .+..++...+.|+..+....
T Consensus 324 ~l~~l~~~---~g-~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~s 399 (477)
T TIGR01301 324 GMEKLCRG---WG-AGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYS 399 (477)
T ss_pred HHHHHHHH---hc-cchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHH
Confidence 33445555 56 5677777887777777665552221 1 25566777889999999999
Q ss_pred hhhHHHHhhhcc--cccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc--hHHHHHHHHHHHHHHHH-hheeecccc
Q 013568 246 VVDSMVVERARG--ESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG--VRFVFGVTALLPLITSG-VAVLVKEQQ 319 (440)
Q Consensus 246 ~~~~~~~~~~~~--~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g--w~~~f~i~~~~~~~~~~-~~~~~~e~~ 319 (440)
.-.+++++..++ +..|..+++++.+.. +.+++..+..|.+.+.+| -.+++.+.++..+++.+ ..+.+|+++
T Consensus 400 iPfal~s~~~~~~~~~~G~~mgilN~~I~---lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 400 IPFALASIRSSNLGAGQGLSMGVLNLAIV---IPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HhHHHHHHHccccCCCCcchhhHHHHHHH---HHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999985 455888999998888 999999988888665554 56677888888877776 445667654
No 240
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.81 E-value=0.00014 Score=71.05 Aligned_cols=111 Identities=15% Similarity=0.140 Sum_probs=88.0
Q ss_pred hhhHHHHHHHHHHHHHHh--hhchh------HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhh
Q 013568 204 YLVLSGLLGALSWSLMAT--IVESK------YSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSA 275 (440)
Q Consensus 204 ~l~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 275 (440)
.++++.++..++.+++.. ..... ..+.++.++.++|.|+.-+....+..|.++++++.+..+.++..+.+.|
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in 82 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGIN 82 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHh
Confidence 355666677777666331 22222 4577888899999999999999999999998866777888888899899
Q ss_pred hHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHhhee
Q 013568 276 FGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSGVAVL 314 (440)
Q Consensus 276 ~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 314 (440)
+|..++..+.+++-+++||.+.|.+.++..+++.+.++.
T Consensus 83 ~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 83 IGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999888877765543
No 241
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.76 E-value=0.00043 Score=70.64 Aligned_cols=179 Identities=13% Similarity=0.135 Sum_probs=115.5
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCCh---hhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDP---AETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~---~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
.+.+.++..|+.+.. .......|......++-+. ...+++.....++..+ +.+.|.+.-++ | +-|..++++
T Consensus 311 ~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i---r-~~Kw~li~~ 386 (599)
T PF06609_consen 311 GFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI---R-HIKWQLIFG 386 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc---c-chhHHHHHH
Confidence 344555555665554 2333345555554455554 2466666666666555 56678888764 3 566666677
Q ss_pred HHHHHHHHHHHHhh-hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 209 GLLGALSWSLMATI-VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 209 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
.+++.+++.+++.. .++....+...++.|++.+...........-..|++..+.+.++...... +|+.+|..+..-
T Consensus 387 ~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~---~GGsIg~aIy~~ 463 (599)
T PF06609_consen 387 SVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRS---IGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHH---HhhHHHHHHHHH
Confidence 66666554455422 34555566777889999988877777777777788888888877776666 777766655543
Q ss_pred hhhc--------------------------------------------------------------cchHHHHHHHHHHH
Q 013568 288 MVDA--------------------------------------------------------------YGVRFVFGVTALLP 305 (440)
Q Consensus 288 l~~~--------------------------------------------------------------~gw~~~f~i~~~~~ 305 (440)
+... .++|++|+....++
T Consensus 464 I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG 543 (599)
T PF06609_consen 464 IFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFG 543 (599)
T ss_pred HHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3200 24789999988888
Q ss_pred HHHHHhheeecccc
Q 013568 306 LITSGVAVLVKEQQ 319 (440)
Q Consensus 306 ~~~~~~~~~~~e~~ 319 (440)
+++.+..+|+++..
T Consensus 544 ~vaiiaa~fl~d~~ 557 (599)
T PF06609_consen 544 VVAIIAALFLGDID 557 (599)
T ss_pred HHHHHHHHHcCChH
Confidence 88888888888754
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.76 E-value=0.00012 Score=53.49 Aligned_cols=65 Identities=31% Similarity=0.575 Sum_probs=48.7
Q ss_pred HHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHH
Q 013568 139 AMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 139 ~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
...||..... +...+.++.|+++ .|++..++|.+.++..+...+ .|++|+++||+ | ++|..+..+
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~---~-~~~~~l~~~ 72 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF---G-KRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C-ccHHHHHHH
Confidence 3444444443 6777889999998 699999999998888877777 78999999994 4 555554444
No 243
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.75 E-value=0.0024 Score=64.07 Aligned_cols=274 Identities=14% Similarity=0.132 Sum_probs=136.4
Q ss_pred cHHHHHHHHHHHHHhh-hHHHHHHHHHHHhc---CCChhhhHHHHHhhhhhHHH--HhhhhhhccccCcCCCCcchhhhH
Q 013568 134 DNFAVAMVYFVQGVLG-LARLAVNFYLKDDL---HLDPAETAVISGFSSLPWLI--KPLYGFISDSLPLFGYRRRSYLVL 207 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~---g~s~~~~g~~~s~~~l~~~~--~~~~g~l~Dr~~~~G~~rr~~l~~ 207 (440)
+++.+.+.+|+..+.+ +.. -++|.+ ..+++.+..+=....++.++ ..+...+++++ + |.+++-+
T Consensus 25 k~~~l~~m~f~i~f~y~~lR-----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~---s--~~~lFy~ 94 (491)
T PF03219_consen 25 KFLPLALMFFFILFNYTILR-----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL---S--REKLFYI 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC---C--HHHHHHH
Confidence 4566666666665542 222 234432 22455666666666677665 55779999984 3 5555554
Q ss_pred HHHHHHHHHHHHHhh--------hchh----------------------HHHHHHHHHHHHHHHhh-hhhhhHHHHhhhc
Q 013568 208 SGLLGALSWSLMATI--------VESK----------------------YSAALSILLGSLSVAFS-DVVVDSMVVERAR 256 (440)
Q Consensus 208 ~~~~~~~~~~~~~~~--------~~~~----------------------~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~ 256 (440)
....+...+.+.+++ +++. |...+..+..-+-.+.. ....+++..|+++
T Consensus 95 ~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt 174 (491)
T PF03219_consen 95 IIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITT 174 (491)
T ss_pred HHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 444444444444422 1111 01111111112222222 3357899999999
Q ss_pred ccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh---------ccchHHHHHHH----HHHHHHHHHhheeeccccccCC
Q 013568 257 GESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD---------AYGVRFVFGVT----ALLPLITSGVAVLVKEQQVLGP 323 (440)
Q Consensus 257 ~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~---------~~gw~~~f~i~----~~~~~~~~~~~~~~~e~~~~~~ 323 (440)
.+|-.+..++++.+.. +|.++++.+..++.+ ...|...+... .+.+.+......++.+....++
T Consensus 175 ~~eAKRfYpl~g~gan---igli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~ 251 (491)
T PF03219_consen 175 VEEAKRFYPLFGLGAN---IGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDP 251 (491)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 8887766666665444 888888877777766 12354433221 1222222222222222111111
Q ss_pred Cc-CCCCCCCCCccchhhHHHH-HHHHHHhcCcchhhhHHHHHhhhcccc-ccceeeeeeeccCCCChh----hHHHHHH
Q 013568 324 SR-RQNLPLGDPSFFESSKQNM-FQLWEAVKQPNVFLPTLFVFLWQATPH-SDSAMFYFTTNELGFTPE----FLGRVKF 396 (440)
Q Consensus 324 ~~-~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~----~~g~~~~ 396 (440)
.. +......+ +..+... ..++.+++.|.+..+++...+|+.... ....+-....+.+ -++. ..|....
T Consensus 252 ~~~~~~~~~kk----~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~-~~~~~ysafmG~~~~ 326 (491)
T PF03219_consen 252 RFYPSAKKKKK----KKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLY-PDPNDYSAFMGKFSS 326 (491)
T ss_pred ccchhhhcccc----cCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCchHHHHHHHHHHH
Confidence 00 00000000 1112222 334456688888888877777776321 1111110000111 1222 2355556
Q ss_pred HHHHHHHHHHHHHHHhhccCCchhHHHHH
Q 013568 397 VTSVASLLGVGLYNGFLKNVPLRKIFLAN 425 (440)
Q Consensus 397 ~~~i~~~~g~~~~~~l~~r~g~r~~l~~~ 425 (440)
..++..++-.++++.+.+|+|.+....+.
T Consensus 327 ~tGivtii~~~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 327 WTGIVTIIMMFLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 67777777778889999999988776664
No 244
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.63 E-value=0.0015 Score=66.18 Aligned_cols=133 Identities=17% Similarity=0.131 Sum_probs=88.7
Q ss_pred HHHHhhhhhHHH-HhhhhhhccccCcCCCCcch------hhhHHHHHHHHHHHHHH----hhh-----chhHHHHHHHHH
Q 013568 172 VISGFSSLPWLI-KPLYGFISDSLPLFGYRRRS------YLVLSGLLGALSWSLMA----TIV-----ESKYSAALSILL 235 (440)
Q Consensus 172 ~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~------~l~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~~l 235 (440)
++.++..+...+ .|+.|++.||+ | +|+. -+.++.++.+++.+.++ ... .+.+.++...++
T Consensus 313 ~~~~~n~~~iii~~pl~~~l~~rl---~-~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l 388 (489)
T PRK10207 313 SFQALNPFWVVVASPILAGIYTHL---G-SKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLF 388 (489)
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHH---h-hCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHH
Confidence 344444444434 88889999984 4 3331 24455555555543221 011 245667778899
Q ss_pred HHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh----------ccchHHHHHHHHHHH
Q 013568 236 GSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD----------AYGVRFVFGVTALLP 305 (440)
Q Consensus 236 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~----------~~gw~~~f~i~~~~~ 305 (440)
.|+|..+..+...+++.+..|++.++.+++++..... +|..+|..++..... .-.+.+.|...++..
T Consensus 389 ~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~---ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 465 (489)
T PRK10207 389 QSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQA---AAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVT 465 (489)
T ss_pred HHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987777 888888877765421 112456677766666
Q ss_pred HHHHHh
Q 013568 306 LITSGV 311 (440)
Q Consensus 306 ~~~~~~ 311 (440)
++..++
T Consensus 466 ~~~~v~ 471 (489)
T PRK10207 466 LGVAVV 471 (489)
T ss_pred HHHHHH
Confidence 555443
No 245
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.63 E-value=0.00081 Score=68.71 Aligned_cols=161 Identities=17% Similarity=0.085 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhch---
Q 013568 150 LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVES--- 225 (440)
Q Consensus 150 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~--- 225 (440)
......+.+++. .|.+... .+...+..+...+ ..+...+.|| +| ||+.++.+.+.+.++.++++.....
T Consensus 313 ~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~---~g--Rr~lll~s~~~m~~~~~~~~~~~~~~~~ 385 (513)
T KOG0254|consen 313 YVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDR---FG--RRKLLLFGAAGMSICLVILAVVGVFALY 385 (513)
T ss_pred eEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH---hc--cHHHHHHhHHHHHHHHHHHHHHHHHhcc
Confidence 444455555666 4666443 2222223333333 3455899999 45 8999999988888887776622110
Q ss_pred --------hHHHHH-HHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHH
Q 013568 226 --------KYSAAL-SILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRF 296 (440)
Q Consensus 226 --------~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~ 296 (440)
....++ ..+..........+..+.+.+|++|.+-|+.+.++...... +...+-....-.+.+..++..
T Consensus 386 ~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~---~~~~~v~~~~~~~~~~~~~~~ 462 (513)
T KOG0254|consen 386 YPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNW---LWNFLISFFFPFITEALGIGG 462 (513)
T ss_pred CCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHH---HHHHHHHHHHHHHHHhccccc
Confidence 011111 11222222233455666788999999999988776655444 333332333323333333345
Q ss_pred HHHHHHHHHHHHHH--hheeeccccc
Q 013568 297 VFGVTALLPLITSG--VAVLVKEQQV 320 (440)
Q Consensus 297 ~f~i~~~~~~~~~~--~~~~~~e~~~ 320 (440)
.|...+....+..+ +.+++||++.
T Consensus 463 ~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 463 TFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred hHHHHHHHHHHHHHHHheEEcccCCC
Confidence 55555555544444 6678899875
No 246
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.52 E-value=0.021 Score=56.15 Aligned_cols=273 Identities=13% Similarity=0.092 Sum_probs=141.7
Q ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCC---hhhhHHHHHhhhhhHHH--HhhhhhhccccCcCCCCcchhhhHH
Q 013568 134 DNFAVAMVYFVQGVLGLARLAVNFYLKDDLHLD---PAETAVISGFSSLPWLI--KPLYGFISDSLPLFGYRRRSYLVLS 208 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s---~~~~g~~~s~~~l~~~~--~~~~g~l~Dr~~~~G~~rr~~l~~~ 208 (440)
+++-+.+.+++..+... +.--++|.+.++ ++.+.++-++..+|.++ .++.++++++. .+..++-..
T Consensus 28 kflpl~Ll~f~I~~ny~----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-----t~~~vF~~~ 98 (509)
T COG3202 28 KFLPLALLFFCILFNYN----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-----TREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-----CHHHHHHHH
Confidence 34445555555555421 222356666544 56677777778887665 77889999985 355555554
Q ss_pred HHHHHHHHHHHHhhh--------ch-----------h------------HHHHHHHHHHHHHHHh-hhhhhhHHHHhhhc
Q 013568 209 GLLGALSWSLMATIV--------ES-----------K------------YSAALSILLGSLSVAF-SDVVVDSMVVERAR 256 (440)
Q Consensus 209 ~~~~~~~~~~~~~~~--------~~-----------~------------~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~ 256 (440)
...+..++++++..- ++ . |...+.....=+-.+. ..-..+....|+++
T Consensus 99 ~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt 178 (509)
T COG3202 99 LGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 444544444444221 11 0 1111222222222222 33367888999999
Q ss_pred ccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhcc-c---------hHHHHHHHHHHHHHHHHhheeec----cccccC
Q 013568 257 GESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAY-G---------VRFVFGVTALLPLITSGVAVLVK----EQQVLG 322 (440)
Q Consensus 257 ~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~-g---------w~~~f~i~~~~~~~~~~~~~~~~----e~~~~~ 322 (440)
.++-.+..++++.... ++.+++..+..++.++. . -+..+.+.++.++++..+..++. +++...
T Consensus 179 ~~eakRFy~lf~l~~n---i~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~ 255 (509)
T COG3202 179 IEEAKRFYPLFGLGAN---ISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFY 255 (509)
T ss_pred HHHhhhhHHHHHHHHH---HHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh
Confidence 9888877777765555 88888887777776521 1 23444444444444444333322 222210
Q ss_pred -CCc-CCCCCCCCCccchhhHHHH-HHHHHHhcCcchhhhHHHHHhhhcccc-ccceeeeeeeccCCC---ChhhHHHHH
Q 013568 323 -PSR-RQNLPLGDPSFFESSKQNM-FQLWEAVKQPNVFLPTLFVFLWQATPH-SDSAMFYFTTNELGF---TPEFLGRVK 395 (440)
Q Consensus 323 -~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~---s~~~~g~~~ 395 (440)
+.. +++.+ ..+..+ ...+.+++.|-++.+++...+|+.... ....+=--..+.+-- -....|.+.
T Consensus 256 ~~~~~kk~~~--------k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~ 327 (509)
T COG3202 256 LRAKKKKKKK--------KLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQ 327 (509)
T ss_pred HHHhcccccc--------cccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHH
Confidence 111 11111 111222 234445678888888888888877322 111110000000100 112334455
Q ss_pred HHHHHH-HHHHHHHHHHhhccCCchhHHHHHH
Q 013568 396 FVTSVA-SLLGVGLYNGFLKNVPLRKIFLANT 426 (440)
Q Consensus 396 ~~~~i~-~~~g~~~~~~l~~r~g~r~~l~~~~ 426 (440)
...++. .++...+++.+.+|.|.....++.-
T Consensus 328 ~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitP 359 (509)
T COG3202 328 IWTGVVSLVVFLFPGSNLIRRVGWFTGALITP 359 (509)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHH
Confidence 556665 6677788899999999765555433
No 247
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.51 E-value=0.021 Score=55.56 Aligned_cols=130 Identities=25% Similarity=0.224 Sum_probs=81.9
Q ss_pred HHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHH
Q 013568 173 ISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMV 251 (440)
Q Consensus 173 ~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 251 (440)
+...-.++..+ ..++-++.+|++ |+.|.. ...++..++.++.+ ++++.+.-+++..+.+++.|......-++.
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~---y~~Ri~--~~~~l~~~g~l~va-~~~~v~~~l~Gv~las~ssg~GE~tfL~lt 137 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVP---YWIRIL--ICVALSAAGMLLVA-FSPSVWVRLLGVVLASLSSGLGEVTFLSLT 137 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhcc---chHHHH--HHHHHHHHHHhhee-eccchhHHHHHHHHHhhhhhhhHHHHHHHH
Confidence 44344556555 666777888863 224433 33345666666666 678888888888888988888777776664
Q ss_pred HhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc--hHHHHHHHHHHHHHHHHhhe-eecc
Q 013568 252 VERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG--VRFVFGVTALLPLITSGVAV-LVKE 317 (440)
Q Consensus 252 ~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g--w~~~f~i~~~~~~~~~~~~~-~~~e 317 (440)
. .+++ ...+.++.+.+ .++++|+..-..+.+ .| .|..+.+...+.++.++.++ .++.
T Consensus 138 ~-~y~~----~~l~~wssGTG---~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 138 H-FYGK----SSLSAWSSGTG---GAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred H-hcCc----cccccccCCcC---hhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4 4443 23445555555 778888876666655 54 47778777777665555433 4443
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=97.09 E-value=0.011 Score=60.74 Aligned_cols=180 Identities=8% Similarity=0.056 Sum_probs=106.3
Q ss_pred cccccCCccHHHHHHHHHHHHHhh-hHHHHHHHHHHHhc-CCCh-hh-hHHHHHhhhhhHHH-HhhhhhhccccCcCC-C
Q 013568 126 FFGVDLSPDNFAVAMVYFVQGVLG-LARLAVNFYLKDDL-HLDP-AE-TAVISGFSSLPWLI-KPLYGFISDSLPLFG-Y 199 (440)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~-g~s~-~~-~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G-~ 199 (440)
++....+..+|++++.+++..-.+ .....+-+..+. + |.+. .+ ..+++++..++..+ ....|.++..+.+.+ .
T Consensus 346 ~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~s-l~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~ 424 (591)
T PTZ00207 346 FIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTA-LAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE 424 (591)
T ss_pred HHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHH-hcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccc
Confidence 333445567999888888765543 333344444444 5 6522 32 22256677777776 455566662211111 0
Q ss_pred C--cchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhH
Q 013568 200 R--RRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFG 277 (440)
Q Consensus 200 ~--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g 277 (440)
+ .|+..+....++.++.++++ +.-+...+.+.-++.|++.|...++....++|++- ++-| ..+++...+.-+|
T Consensus 425 ~r~prt~~l~~~~~~~~~~lll~-~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g---~~yN~~~~a~pig 499 (591)
T PTZ00207 425 DRVPITIALFIPSVCIITMLTLF-LTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPA---KHYNFCFLGSVLS 499 (591)
T ss_pred cccchhHHHHHHHHHHHHHHHHH-HHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchH---HHhhHHhHHHHHH
Confidence 0 12333332223445555555 33333578889999999999999999999999998 5545 4566555433355
Q ss_pred HHHH-HHHHHHhhhcc----------c---hHHHHHHHHHHHHHHHHh
Q 013568 278 GIVS-SYFSGSMVDAY----------G---VRFVFGVTALLPLITSGV 311 (440)
Q Consensus 278 ~~ig-~~i~g~l~~~~----------g---w~~~f~i~~~~~~~~~~~ 311 (440)
.++- ..+.|.+.++. | .+..|.+++.+++++.+.
T Consensus 500 s~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~ 547 (591)
T PTZ00207 500 AIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFIT 547 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHH
Confidence 5554 34556555431 2 678899888888777663
No 249
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.08 E-value=0.0012 Score=48.26 Aligned_cols=48 Identities=21% Similarity=0.420 Sum_probs=42.9
Q ss_pred ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHH
Q 013568 382 NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFG 429 (440)
Q Consensus 382 ~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~ 429 (440)
++.|+++.++|.+.++..+..+++..++|++.||.++++.+.....++
T Consensus 28 ~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 28 KQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 568999999999999999999999999999999999988877765543
No 250
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.01 E-value=0.027 Score=47.35 Aligned_cols=101 Identities=12% Similarity=0.031 Sum_probs=71.9
Q ss_pred hhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhc
Q 013568 178 SLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERAR 256 (440)
Q Consensus 178 ~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 256 (440)
...+.+ .++...+.++ .| .|..++++.+...+-.... +-++.+.++.+-.+.|++.+...++...++.+..+
T Consensus 47 Y~~~~~s~l~~P~iv~~---lg--~K~sm~lg~~~y~~y~~~~--~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNK---LG--PKWSMILGSLGYAIYIASF--FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHhHHHHHHH---Hh--hHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 333444 5555677777 45 7888888877776543332 44667788888899999999999999999999999
Q ss_pred ccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 257 GESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 257 ~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
++.+++..+++-.... .+.++|.++.-.+
T Consensus 120 ~~~~~~~~~ifw~i~~---~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQ---SSLIFGNLFLFFI 148 (156)
T ss_pred HHHHhhHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 9888876665543333 6777777665544
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.00 E-value=0.0055 Score=58.20 Aligned_cols=129 Identities=16% Similarity=0.133 Sum_probs=92.6
Q ss_pred HHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 013568 155 VNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSI 233 (440)
Q Consensus 155 l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (440)
...+..+.+|.++.+.|-+.+...+...+ +....+..||. .| .-+.++..+..++.-..+.+. .......+.+..
T Consensus 284 ~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~--~~-~~~a~l~~~l~~~vP~~llls-~~~~~~~l~~~s 359 (451)
T KOG2615|consen 284 VLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRY--KG-NIKAVLLFSLLLIVPAFLLLS-LARTPVVLYLGS 359 (451)
T ss_pred HHHhhcCccCCChhhheeeeehhhHHHHHHHHhcccccccc--cc-chhhHHHHHHHHHHHHHHHHh-ccccchhhhHHH
Confidence 33333456899999999887777776665 77778888873 22 234444444444433333444 556667777888
Q ss_pred HHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh
Q 013568 234 LLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD 290 (440)
Q Consensus 234 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~ 290 (440)
.+..+..+...+....++....|.++||..+++...... ++-++||+++|.+..
T Consensus 360 ~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~a---laRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 360 TLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGA---LARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHH---HHHHhhhhhhheeEE
Confidence 888888888888888899999999999987777665555 999999999998764
No 252
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.89 E-value=0.042 Score=56.26 Aligned_cols=127 Identities=17% Similarity=0.115 Sum_probs=84.9
Q ss_pred hhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhH--HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccc
Q 013568 186 LYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKY--SAALSILLGSLSVAFSDVVVDSMVVERARGESQSVS 263 (440)
Q Consensus 186 ~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 263 (440)
..+.+.|+ +| ||.....+.++..++.++.++...... ...+...+..++.+........+..|+.|...|..+
T Consensus 369 ~~~~~~~~---~g--R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~ 443 (521)
T KOG0255|consen 369 RNGLLLPE---FG--RRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTA 443 (521)
T ss_pred HHHHHHHH---hC--cHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 33678887 45 888888888888888777774443333 344555566666666666778899999999999988
Q ss_pred hhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH-hheeecccccc
Q 013568 264 GSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSG-VAVLVKEQQVL 321 (440)
Q Consensus 264 ~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~ 321 (440)
.+..+.... +|.+++|.+...... +.....+.+.+....+..+ ..+++||++..
T Consensus 444 ~~~~~~~~~---~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 444 VGAISAAAR---LGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 888887777 888888887765543 2222222223444444444 44788998754
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.79 E-value=0.0094 Score=44.14 Aligned_cols=75 Identities=23% Similarity=0.187 Sum_probs=53.1
Q ss_pred HHhhhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHH-hhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhc
Q 013568 146 GVLGLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIK-PLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVE 224 (440)
Q Consensus 146 ~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~-~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~ 224 (440)
|+.-+..+.+.|.+.++.++|.++.|++.+...++|.++ .....+.++. +++..+..+.+...++...++ +.+
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~ma-~~~ 78 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-----RPRRLLRAGLLLTVLSTAAMA-LTH 78 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cHHHHHHHHHHHHHHHHHHHH-HHh
Confidence 333233344555556668999999999999999999995 4557777752 466777778888888877777 444
Q ss_pred hh
Q 013568 225 SK 226 (440)
Q Consensus 225 ~~ 226 (440)
+.
T Consensus 79 ~~ 80 (85)
T PF06779_consen 79 SF 80 (85)
T ss_pred ch
Confidence 43
No 254
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.70 E-value=0.015 Score=59.69 Aligned_cols=157 Identities=15% Similarity=0.081 Sum_probs=107.1
Q ss_pred HHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHH-hhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhh------c
Q 013568 152 RLAVNFYLKDDLHLDPAETAVISGFSSLPWLIK-PLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIV------E 224 (440)
Q Consensus 152 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~-~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~------~ 224 (440)
...+..|+.+++|.+...+.-....+.-..... .+.++++|-+ +| |-+.+.++.++..++.+++...+ +
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f--~g--ry~tI~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSF--LG--RYFTINIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHH--hH--HHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 446667788888988876666555554444444 4679999997 77 66666666555555543332111 0
Q ss_pred ---------------h---hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhc---ccccccchhhhHHhhhhhhhHHHHHHH
Q 013568 225 ---------------S---KYSAALSILLGSLSVAFSDVVVDSMVVERAR---GESQSVSGSLQSLCWGSSAFGGIVSSY 283 (440)
Q Consensus 225 ---------------~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~g~~ig~~ 283 (440)
+ ...+.....+..+|.+..-+...++-+|-++ ++++......++..+...++|..++..
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHH
Confidence 0 0133455566667788888888889899888 444444557777777777899999998
Q ss_pred HHHHhhhccchHHHHHHHHHHHHHHHHhh
Q 013568 284 FSGSMVDAYGVRFVFGVTALLPLITSGVA 312 (440)
Q Consensus 284 i~g~l~~~~gw~~~f~i~~~~~~~~~~~~ 312 (440)
+..++-+..||.+.|.+..+..+++.+++
T Consensus 213 ~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 213 VLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred HHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 88888888999999999887776665543
No 255
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.42 E-value=0.0014 Score=64.74 Aligned_cols=74 Identities=31% Similarity=0.483 Sum_probs=55.8
Q ss_pred HHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHH
Q 013568 142 YFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLM 219 (440)
Q Consensus 142 ~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~ 219 (440)
++..+.. +.+.+.++.|.++ +|+++.++|.++.+--+...+ .|++|+++||+ .++|+.++.+.+..+.+.+++
T Consensus 20 ~~~~~~~~g~l~pll~vy~kQ-LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~----r~~r~lllgsl~~~v~a~fll 94 (618)
T KOG3762|consen 20 YLFFGARFGSLFPLLAVYFKQ-LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY----RKRRPLLLGSLLLSVTATFLL 94 (618)
T ss_pred eeeeeecccccchHHHHHHHH-cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH----HhcCchhHHHHHHHHHHHHhe
Confidence 3433343 5566678888888 899999999998887777777 89999999996 357777777777766666665
Q ss_pred H
Q 013568 220 A 220 (440)
Q Consensus 220 ~ 220 (440)
.
T Consensus 95 ~ 95 (618)
T KOG3762|consen 95 V 95 (618)
T ss_pred e
Confidence 5
No 256
>PRK03612 spermidine synthase; Provisional
Probab=96.36 E-value=0.22 Score=50.84 Aligned_cols=154 Identities=12% Similarity=0.089 Sum_probs=74.9
Q ss_pred HHHHHHHHHhh-hHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHH---HH
Q 013568 139 AMVYFVQGVLG-LARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLL---GA 213 (440)
Q Consensus 139 ~~~~~~~~~~~-~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~---~~ 213 (440)
....|..++.+ .+.....-.+.-.+|-+....+.+.+++.++.++ ..+.+.+.++. .+.+...-..+ ..
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~------~~~~~~~e~~i~l~~~ 93 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA------AAGFVAVELLLALLGG 93 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHH
Confidence 33444555554 3444444555666888888899999999999887 34555555331 22222221111 11
Q ss_pred HHHHHHHhhh---chh-HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 214 LSWSLMATIV---ESK-YSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 214 ~~~~~~~~~~---~~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
++..++.... ... ..+....++.++..|+..|....+..+...++.....+.++. ... +|.++|.++.+++.
T Consensus 94 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~-~nt---lGa~~G~l~~~~vL 169 (521)
T PRK03612 94 LSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLA-ADY---LGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHh-HHh---HHHHHHHHHHHHHH
Confidence 1111111000 011 112233345556666665555555443322112122223332 333 89999999988754
Q ss_pred -hccchHHHHHHHH
Q 013568 290 -DAYGVRFVFGVTA 302 (440)
Q Consensus 290 -~~~gw~~~f~i~~ 302 (440)
..+|-....++.+
T Consensus 170 lp~lG~~~t~~~~a 183 (521)
T PRK03612 170 LPRLGLIRTAALTG 183 (521)
T ss_pred HHhcchHHHHHHHH
Confidence 4566443333333
No 257
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.23 E-value=0.026 Score=52.96 Aligned_cols=121 Identities=15% Similarity=0.164 Sum_probs=80.4
Q ss_pred hhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhH
Q 013568 189 FISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQS 268 (440)
Q Consensus 189 ~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 268 (440)
.+.|-+ |.||++++-.+....++.++. +.++.+.+-+.-++.|...+. ..+..+++-+..+++++.+..+...
T Consensus 64 lLTD~l-----rYKPvivlq~ls~v~~w~~lv-~g~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~Yqrvt~y~R 136 (433)
T KOG3810|consen 64 LLTDYL-----RYKPVVVLQALSGVPVWIMLV-FGPSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEMYKRVTGYCR 136 (433)
T ss_pred HHhhhh-----hcceeeeeeccchhHHHHHHH-hcCCchheeeehhhcChHHHH-HHhhhheeeeecCHHHHHHHHHHhH
Confidence 567874 689998887777777777766 778887777777777776655 3577788888888887776666555
Q ss_pred HhhhhhhhHHHHHHHHHHHhhh--ccchHHHHHHHHHHHHHHHHhheeecccc
Q 013568 269 LCWGSSAFGGIVSSYFSGSMVD--AYGVRFVFGVTALLPLITSGVAVLVKEQQ 319 (440)
Q Consensus 269 ~~~~~~~~g~~ig~~i~g~l~~--~~gw~~~f~i~~~~~~~~~~~~~~~~e~~ 319 (440)
.... .|-.+|...+-.++. ..++...-.+......++.+..+++|..+
T Consensus 137 aA~L---~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 137 AAFL---VGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHH---HHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 4444 666666666666553 23344444454444445555667777665
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.15 E-value=0.018 Score=56.04 Aligned_cols=182 Identities=12% Similarity=0.065 Sum_probs=94.9
Q ss_pred cCCccHHHHHHHHHHH-HHhhhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhH
Q 013568 130 DLSPDNFAVAMVYFVQ-GVLGLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVL 207 (440)
Q Consensus 130 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~ 207 (440)
..++++..+.+.|... +..+.....+...+.. -|.+....|.+..+..++..+ ..+.|.+.||. . +-|..+.+
T Consensus 263 ~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt---k-~fk~~~~v 337 (480)
T KOG2563|consen 263 FKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKT---K-KFKLTTLV 337 (480)
T ss_pred HcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhh---h-hHHHHHHH
Confidence 3455666666555332 2223334344434444 367777788876666666666 66789999994 1 23344444
Q ss_pred HHHHHHHHHHHHHhhhc---hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 208 SGLLGALSWSLMATIVE---SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 208 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
......++...+..+.. ....+...-.+.|++.....+...-+..|..-+..-+...|+.++... +-+++-..+
T Consensus 338 ~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq---~f~~~~~~~ 414 (480)
T KOG2563|consen 338 LYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQ---IFGVILVFI 414 (480)
T ss_pred HHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehh---HHHHHHHHH
Confidence 33333333222221111 112233444566677777777888888887766554555555543333 444444555
Q ss_pred HHHhhhccc---hHH-HHHHHHHHHHHHHHhheeecccc
Q 013568 285 SGSMVDAYG---VRF-VFGVTALLPLITSGVAVLVKEQQ 319 (440)
Q Consensus 285 ~g~l~~~~g---w~~-~f~i~~~~~~~~~~~~~~~~e~~ 319 (440)
-+...+..+ |.+ .-+......++.+++..++++..
T Consensus 415 ~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 415 MGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred HHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 555555554 333 33333444444445444555443
No 259
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.07 E-value=0.38 Score=48.64 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=80.9
Q ss_pred hHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcc----hh-hhHHHHHHHHHHHHHHhhh--------chhHHHHHHHHH
Q 013568 170 TAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRR----SY-LVLSGLLGALSWSLMATIV--------ESKYSAALSILL 235 (440)
Q Consensus 170 ~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr----~~-l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l 235 (440)
.++..++..+...+ +|+.+++=.|. +.++| +. +.++.++..+++..+.... .+...+++..++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l---~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~ 386 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKES---VAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAV 386 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHH---hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 44555555554444 77766664442 10111 11 4556666666665553111 245667888899
Q ss_pred HHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh------------ccchHHHHHHHHH
Q 013568 236 GSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD------------AYGVRFVFGVTAL 303 (440)
Q Consensus 236 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~------------~~gw~~~f~i~~~ 303 (440)
..+|.-...|+..++++++.|++.++..++++.... +.+|..++..+++.... ...+...|...++
T Consensus 387 ~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 464 (493)
T PRK15462 387 MGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLS--GAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITW 464 (493)
T ss_pred HHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHH
Confidence 999999999999999999999999998888874311 11455554444443321 0124556776666
Q ss_pred HHHHH
Q 013568 304 LPLIT 308 (440)
Q Consensus 304 ~~~~~ 308 (440)
..++.
T Consensus 465 ~~~~~ 469 (493)
T PRK15462 465 GALAC 469 (493)
T ss_pred HHHHH
Confidence 55444
No 260
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.89 E-value=0.23 Score=49.33 Aligned_cols=151 Identities=15% Similarity=0.110 Sum_probs=91.4
Q ss_pred cCCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHh--cCCChhhh-HHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchh
Q 013568 130 DLSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDD--LHLDPAET-AVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSY 204 (440)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~--~g~s~~~~-g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~ 204 (440)
..+++.+.+...++..|+. +......|..+.-. .+.+.... ++..-...++..+ +.+++.+++|++++| |++.
T Consensus 237 ~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg--~~~~ 314 (461)
T KOG3098|consen 237 LKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFG--RKPT 314 (461)
T ss_pred hcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcc--cCcc
Confidence 3455666677777777665 44444444443321 23333332 2222223444444 678899999987777 7888
Q ss_pred hhHHHHHHHHHHHHHHhhhc-----------------hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhh
Q 013568 205 LVLSGLLGALSWSLMATIVE-----------------SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQ 267 (440)
Q Consensus 205 l~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 267 (440)
+.++..+..+..++.-...+ +.....++-++.|++-+........++.+.. +++|..+.+++
T Consensus 315 ~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~ 393 (461)
T KOG3098|consen 315 VLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLF 393 (461)
T ss_pred hhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHH
Confidence 77777666665544431111 1335567778899999998888999999998 55566676777
Q ss_pred HHhhhhhhhHHHHHHHHHH
Q 013568 268 SLCWGSSAFGGIVSSYFSG 286 (440)
Q Consensus 268 ~~~~~~~~~g~~ig~~i~g 286 (440)
.+-.. ++..++-....
T Consensus 394 kfyq~---~~s~v~~f~~~ 409 (461)
T KOG3098|consen 394 KFYQS---VASCVAFFFSP 409 (461)
T ss_pred HHHHH---HHHHHHhhhhh
Confidence 66655 55555444443
No 261
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.82 E-value=0.055 Score=54.09 Aligned_cols=125 Identities=18% Similarity=0.191 Sum_probs=94.8
Q ss_pred HHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhh-hhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHH
Q 013568 155 VNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYG-FISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALS 232 (440)
Q Consensus 155 l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g-~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (440)
++.|++..++.+..+.+.+.+.......+ +.+.. .+.-. +| .|.++.++...-.+.....+ ++...+++...
T Consensus 264 ~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~---l~--~~~~i~lGl~~~~~~~~~~a-f~~~~w~~~~~ 337 (463)
T KOG2816|consen 264 LLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI---LG--EKRLISLGLLSEFLQLLLFA-FATETWMMFAA 337 (463)
T ss_pred EEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hh--hhhHhhHHHHHHHHHHHHHH-HhccchhhhHH
Confidence 35667777999999999877777766666 55554 44444 55 44477888888878877777 77777777776
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 233 ILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 233 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
..+.++. ....+...++++.+..++++|+..++.+.... +.++++|.+-+.+.
T Consensus 338 ~v~~~~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~---l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 338 GVVVALA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEG---LSGVVSPALYGNIF 390 (463)
T ss_pred HHHHHhh-cchhHHHHhHHHhhcccccccchhhHHHHHHH---HhhhhhHHHHHHHH
Confidence 6655554 44567889999999999999999999888777 88899998888765
No 262
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.77 E-value=0.096 Score=51.03 Aligned_cols=63 Identities=16% Similarity=0.072 Sum_probs=51.8
Q ss_pred hchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHh
Q 013568 223 VESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM 288 (440)
Q Consensus 223 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l 288 (440)
.++.+.+++..+..|+..|...+-....+.|-.++++|..+++..+++.. +|..++.+++-++
T Consensus 332 ipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds---~GI~lAgll~l~l 394 (402)
T PF02487_consen 332 IPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDS---LGILLAGLLGLPL 394 (402)
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH
Confidence 35667777788899999999888888888988899999999999888877 7877777776554
No 263
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.70 E-value=0.039 Score=52.44 Aligned_cols=54 Identities=13% Similarity=0.064 Sum_probs=47.6
Q ss_pred ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhh
Q 013568 382 NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 382 ~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~ 435 (440)
+.+|++..+++.++....+..++.+.+.|.+.||+|||+..+..+++.++.++.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~ 115 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT 115 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 578999999999999988888888888999999999999999888888777754
No 264
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.19 E-value=0.096 Score=54.93 Aligned_cols=82 Identities=18% Similarity=0.214 Sum_probs=55.7
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhh-HHH-HhhhhhhccccCcCCCCcchhhhH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLP-WLI-KPLYGFISDSLPLFGYRRRSYLVL 207 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~-~~~-~~~~g~l~Dr~~~~G~~rr~~l~~ 207 (440)
.++.++...+..++.... ..+..++|.|+++.+|++..+++++.++..++ .++ .++.|+++||+ +.+.|..+.+
T Consensus 328 ~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~---~~~~~~~~~~ 404 (633)
T TIGR00805 328 CNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF---KLNVKKAAYF 404 (633)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee---cccHHHHHHH
Confidence 455666666666555544 56777999999999999999999998877764 445 67889999995 3123444444
Q ss_pred HHHHHHHH
Q 013568 208 SGLLGALS 215 (440)
Q Consensus 208 ~~~~~~~~ 215 (440)
+.++..++
T Consensus 405 ~~~~~~~~ 412 (633)
T TIGR00805 405 AICLSTLS 412 (633)
T ss_pred HHHHHHHH
Confidence 44433333
No 265
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.83 E-value=0.12 Score=46.79 Aligned_cols=101 Identities=12% Similarity=0.105 Sum_probs=51.0
Q ss_pred cccccchhhhHHhhhhhhhHHHHHHHHHHHh---h--hccchHHHHHHHHHHHHHHHHhheeeccccccCCCcCCCCCCC
Q 013568 258 ESQSVSGSLQSLCWGSSAFGGIVSSYFSGSM---V--DAYGVRFVFGVTALLPLITSGVAVLVKEQQVLGPSRRQNLPLG 332 (440)
Q Consensus 258 ~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l---~--~~~gw~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 332 (440)
++|+..+.+...++. +|.++.....-.- . ..-.|++++.+.+++.++-++++.++ +++-+...++++++..
T Consensus 2 k~K~~~s~~n~~gf~---iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if-Gk~fd~~~~~~k~~k~ 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFN---IGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF-GKNFDIYSPKEKQEKE 77 (267)
T ss_pred Cccceeeeeccccch---hhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccCcccccccc
Confidence 344555555555555 7776654332211 1 12359999999998887777655543 2221111111000000
Q ss_pred CCccchhhHHHHHHHHHHhcCcchhhhHHHHHhhh
Q 013568 333 DPSFFESSKQNMFQLWEAVKQPNVFLPTLFVFLWQ 367 (440)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 367 (440)
+ ...+......+.+|++..|..++....+.
T Consensus 78 ~-----~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 78 N-----STLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred c-----ccccccchHHHHHccchHHHHHHHHHHHh
Confidence 0 00111245677899999888765444433
No 266
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=94.82 E-value=0.11 Score=50.80 Aligned_cols=155 Identities=17% Similarity=0.220 Sum_probs=75.9
Q ss_pred HHHHHHHHHH-hhhHHHHHHHHH---HHhcCCChhhhHHHHHhhhhhHHHH-hhhhhhcccc----CcCCCCcchhhhHH
Q 013568 138 VAMVYFVQGV-LGLARLAVNFYL---KDDLHLDPAETAVISGFSSLPWLIK-PLYGFISDSL----PLFGYRRRSYLVLS 208 (440)
Q Consensus 138 ~~~~~~~~~~-~~~~~~~l~~~l---~~~~g~s~~~~g~~~s~~~l~~~~~-~~~g~l~Dr~----~~~G~~rr~~l~~~ 208 (440)
..+.+....+ .+.+.-|.|.++ .+..|.+..+.-++..++..+..++ .++|.++|++ +..| +-|.--+.+
T Consensus 249 ~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~-~~~~~q~~~ 327 (493)
T KOG1330|consen 249 SSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSG-TLRASQLSA 327 (493)
T ss_pred ehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhccccc-chhHHHHHH
Confidence 3444443333 344444444333 2323434433334444445555554 4669999985 2222 111111111
Q ss_pred H---HHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHh-hhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 209 G---LLGALSWSLMATIVESKYSAALSILLGSLSVAF-SDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 209 ~---~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
. .+.+....+......+.....+..++.|..... ......-+..++.|++.|..+.++...... .+|..-+|.+
T Consensus 328 ~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h--~fgd~~~p~i 405 (493)
T KOG1330|consen 328 ALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEH--IFGDAASPYI 405 (493)
T ss_pred hhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHH--HhccCCCcce
Confidence 1 111112222221222222233333444444433 344555567888899999988877754433 4677778878
Q ss_pred HHHhhhcc-chH
Q 013568 285 SGSMVDAY-GVR 295 (440)
Q Consensus 285 ~g~l~~~~-gw~ 295 (440)
.|.+.++. ||+
T Consensus 406 vGilsd~l~g~~ 417 (493)
T KOG1330|consen 406 VGILSDKLRGYK 417 (493)
T ss_pred ehhHHHHhhCCC
Confidence 89888753 565
No 267
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.81 E-value=0.072 Score=53.02 Aligned_cols=74 Identities=16% Similarity=0.222 Sum_probs=58.2
Q ss_pred HHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 013568 234 LLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSG 310 (440)
Q Consensus 234 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~ 310 (440)
++.|.+.-.......++.+++..+.+++...+++++... ++..+||++...+....|.|+...+.+...++...
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s---~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~ 469 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGS---IARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAA 469 (488)
T ss_pred heeccccccccchHHHHHHHHhCCccccceeEEEEeccc---hhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHH
Confidence 444555555566788899999999999999999988877 99999999999998888988887776655544433
No 268
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.69 E-value=1.4 Score=41.51 Aligned_cols=44 Identities=9% Similarity=0.093 Sum_probs=35.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHH
Q 013568 385 GFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIF 428 (440)
Q Consensus 385 g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~ 428 (440)
++.-..+|.++..++++..+.+.+.|-+.+++||-.++..+.+.
T Consensus 306 ~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv 349 (390)
T KOG3097|consen 306 ALGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVV 349 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHH
Confidence 44557889999999999888888999999999988877665443
No 269
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=94.59 E-value=0.045 Score=54.34 Aligned_cols=80 Identities=13% Similarity=0.071 Sum_probs=59.7
Q ss_pred hhhhHHHHHhhhccccccceeeeeeeccCCCChhh-HHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhh
Q 013568 356 VFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEF-LGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGM 434 (440)
Q Consensus 356 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~ 434 (440)
...+|+|.|+-.+=........ ++.+++|++..+ .|.+...+..+.++..++.|++.||+|.|+++.++.++..++.+
T Consensus 29 ~~~lC~fGF~~e~R~n~s~a~p-~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~ 107 (511)
T TIGR00806 29 VLYLCFYGFMAQFRPGESFITP-YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWL 107 (511)
T ss_pred HHHHHHHHHHHHhhchHHHHHH-HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3445666666554222111222 334689999999 99999999999999999999999999999999988877766655
Q ss_pred hh
Q 013568 435 TQ 436 (440)
Q Consensus 435 ~~ 436 (440)
+.
T Consensus 108 L~ 109 (511)
T TIGR00806 108 LL 109 (511)
T ss_pred HH
Confidence 43
No 270
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.25 E-value=0.013 Score=60.03 Aligned_cols=156 Identities=15% Similarity=0.172 Sum_probs=0.0
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH--HhhhhhhccccCcCCCCcchhhhH
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI--KPLYGFISDSLPLFGYRRRSYLVL 207 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~--~~~~g~l~Dr~~~~G~~rr~~l~~ 207 (440)
.++.++...+......+. ..+...+|.|++.+|++++.+++++.++..++.+. ..++|++..|+. .+ .|..+..
T Consensus 303 ~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~k-l~--~~~~~~~ 379 (539)
T PF03137_consen 303 TNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFK-LS--ARGAAKF 379 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEec-Cc--HHHHHHH
Confidence 344455555555555554 56777999999999999999999999888887665 457799999972 22 2222222
Q ss_pred HHHHHHHHHHH---HHh--hh--------chh----------------------------------------HHHHHHHH
Q 013568 208 SGLLGALSWSL---MAT--IV--------ESK----------------------------------------YSAALSIL 234 (440)
Q Consensus 208 ~~~~~~~~~~~---~~~--~~--------~~~----------------------------------------~~~~~~~~ 234 (440)
..+...++.+. ..+ +. .++ ...++..+
T Consensus 380 ~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~ 459 (539)
T PF03137_consen 380 CIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLF 459 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHH
Confidence 22222111111 110 00 000 01122223
Q ss_pred HHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhc
Q 013568 235 LGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDA 291 (440)
Q Consensus 235 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~ 291 (440)
+..+..+...+......-...++++|+.+.++...... .+|.+-||++.|.+++.
T Consensus 460 ~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~r--llg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 460 ILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIR--LLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ---------------------------------------------------------
T ss_pred HHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHH--hhcCcchHHHHhHHHhh
Confidence 33333344444555566678888999999888865443 37888899999988874
No 271
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.01 E-value=0.25 Score=36.63 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=46.8
Q ss_pred eccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhh
Q 013568 381 TNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 381 ~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~ 435 (440)
.++.++|..+.|++.+...+|.++|.+...++.++.+.++.+..+.++..+....
T Consensus 19 ~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 19 QADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 3788999999999999999999999999999988878788888777766655543
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.81 E-value=0.22 Score=49.74 Aligned_cols=147 Identities=17% Similarity=0.206 Sum_probs=84.8
Q ss_pred CChhhhHHHHHhhhhhHHHH-hhh-hhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhc---------hhHHHHHHH
Q 013568 165 LDPAETAVISGFSSLPWLIK-PLY-GFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVE---------SKYSAALSI 233 (440)
Q Consensus 165 ~s~~~~g~~~s~~~l~~~~~-~~~-g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 233 (440)
.++...|.+..+..++..++ .++ -++.++ +.|.++....++.++..+.-..+.. +.+..+.--
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~------~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~ 325 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNW------SWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDT 325 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhH
Confidence 88888887765555555553 344 555554 3455555554444433221110111 112223333
Q ss_pred HHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc--------hHHHHHHHHHHH
Q 013568 234 LLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG--------VRFVFGVTALLP 305 (440)
Q Consensus 234 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g--------w~~~f~i~~~~~ 305 (440)
++..+.......+...+++++.|+...|...++. .+..|+|..++..++..+.+.++ -.+..++..++.
T Consensus 326 ~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall---~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ 402 (433)
T PF03092_consen 326 ILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALL---ASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQ 402 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH
Confidence 5566666666777888999999998777554444 45556999999999998876554 223344445555
Q ss_pred HHHHHhheeeccccc
Q 013568 306 LITSGVAVLVKEQQV 320 (440)
Q Consensus 306 ~~~~~~~~~~~e~~~ 320 (440)
++.+.+..++|++++
T Consensus 403 ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 403 LLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHcCCCch
Confidence 444445556676443
No 273
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=92.27 E-value=3.1 Score=41.55 Aligned_cols=83 Identities=23% Similarity=0.176 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH------hhhccchHHHH
Q 013568 225 SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS------MVDAYGVRFVF 298 (440)
Q Consensus 225 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~------l~~~~gw~~~f 298 (440)
+.+.++...+++++|.=+..+...+++....|+.-.+..++.+-.... .|..++..+++. ..+.......|
T Consensus 393 s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a---~~~~l~g~va~~~~~~~~~~~~~~~~~~F 469 (498)
T COG3104 393 SVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVA---AGQTLGGQVAGLTAVTDPAYTAFIEGRVF 469 (498)
T ss_pred CHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHH---HHHHhhceecccccccchhhhhhhhhhhH
Confidence 456778888999999999999999999999999777766666655444 555555555542 22234456677
Q ss_pred HHHHHHHHHHHH
Q 013568 299 GVTALLPLITSG 310 (440)
Q Consensus 299 ~i~~~~~~~~~~ 310 (440)
+..+....+..+
T Consensus 470 ~~~g~v~i~~~~ 481 (498)
T COG3104 470 GTIGVVAIVIGI 481 (498)
T ss_pred HHHHHHHHHHHH
Confidence 777766655444
No 274
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=90.58 E-value=2.8 Score=41.66 Aligned_cols=124 Identities=16% Similarity=0.168 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHH--HHHh-hhch--
Q 013568 152 RLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWS--LMAT-IVES-- 225 (440)
Q Consensus 152 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~--~~~~-~~~~-- 225 (440)
...+..|++.. |+++..+|..-+...+.... ..++.++.+| .| -.|.-+ .+...-.++.. ...+ ...+
T Consensus 278 ~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r---iG-lvr~G~-~~l~~q~~~L~~~v~~~~~~~~~~ 351 (432)
T PF06963_consen 278 GGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR---IG-LVRAGL-WSLWWQWVCLALCVVSFWAPGSPF 351 (432)
T ss_pred cHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc-chhhHH-HHHHHHHHHHHHHHHHHhcCCCCc
Confidence 44566778885 99999999886666665555 4566777777 45 233222 22222111111 1111 1221
Q ss_pred ----hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 226 ----KYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 226 ----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
...++.+..+.=+|.=..+....-++-|..|+++||..+++...... +-..+.-.+
T Consensus 352 ~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~---lf~ll~~~~ 411 (432)
T PF06963_consen 352 SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQS---LFELLSFVL 411 (432)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHH---HHHHHHHHH
Confidence 12223333444455556777888889999999999998888876666 555554443
No 275
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=89.92 E-value=10 Score=37.34 Aligned_cols=96 Identities=15% Similarity=0.100 Sum_probs=55.3
Q ss_pred hhHHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhh
Q 013568 169 ETAVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVV 247 (440)
Q Consensus 169 ~~g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 247 (440)
-.|.+-++..+..++ ....|.+..++.++| ...+....++.+.+.++++ ..++.+...++.++.+..+.+..+.+
T Consensus 286 YNG~VeA~~tllgA~~al~~g~v~~~w~~~~---~l~l~~~S~l~a~~L~lm~-~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 286 YNGAVEAASTLLGAIAALLAGYVKVNWDRWG---ELALGVFSLLQAGLLFLMS-FTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHhHhhcchHHHH---HHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346665555555454 556688755432222 1122222233344444555 67888888888888888887777776
Q ss_pred hHHHHhhhcccccccchhhhH
Q 013568 248 DSMVVERARGESQSVSGSLQS 268 (440)
Q Consensus 248 ~~~~~~~~~~~~r~~~~~~~~ 268 (440)
..-++.-...+.-+...++..
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHHHHhccccceeeeeeeHH
Confidence 666666666665554444443
No 276
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.55 E-value=6.8 Score=35.73 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=39.9
Q ss_pred hHHHHhhh-hhhccccCcCCCCcchhhhHH----HHHHHHHHHHHHhhhch----hHHHHHHHHHHHHHHHhhhhhhhHH
Q 013568 180 PWLIKPLY-GFISDSLPLFGYRRRSYLVLS----GLLGALSWSLMATIVES----KYSAALSILLGSLSVAFSDVVVDSM 250 (440)
Q Consensus 180 ~~~~~~~~-g~l~Dr~~~~G~~rr~~l~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~l~g~~~~~~~~~~~~~ 250 (440)
++.++|+. |++...- ++||+++... .++.+++.++......+ .....+.-++.|++.=..+++.-.+
T Consensus 153 g~~~G~~~ig~~nkt~----~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~l 228 (267)
T PF07672_consen 153 GYFLGPFTIGLWNKTN----YKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNL 228 (267)
T ss_pred HHhhhceeeccchhhh----hhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcC
Confidence 33446644 7776542 4688877642 33333333332222222 2223334444444432232222222
Q ss_pred HHhhhcccccccchhhhHHhhhhhhhH
Q 013568 251 VVERARGESQSVSGSLQSLCWGSSAFG 277 (440)
Q Consensus 251 ~~~~~~~~~r~~~~~~~~~~~~~~~~g 277 (440)
.-| ++.....+.+-.++..++.|++.
T Consensus 229 PhE-yK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 229 PHE-YKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred hhh-hcCCCcceehhHHHHHHHHHHHH
Confidence 222 22333344556667777733333
No 277
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=88.40 E-value=2.2 Score=33.96 Aligned_cols=43 Identities=26% Similarity=0.204 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHH
Q 013568 389 EFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTA 431 (440)
Q Consensus 389 ~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~ 431 (440)
...+.......++..++..+.+.+.+..+.+..+.....+..+
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALA 129 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHH
Confidence 3456667778888999999999999988877766665544443
No 278
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.34 E-value=1.4 Score=46.15 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=51.4
Q ss_pred CCccHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-H-hhhhhhccccC
Q 013568 131 LSPDNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-K-PLYGFISDSLP 195 (440)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~-~~~g~l~Dr~~ 195 (440)
.++.++...+...+.... ..+..++|.|++++||++...+..+++...++.+. + .++|.+..|+.
T Consensus 390 ~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 390 SNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred cCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence 445566666666666665 57778999999999999999999999888888765 5 46799999973
No 279
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.22 E-value=38 Score=33.79 Aligned_cols=31 Identities=6% Similarity=-0.077 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcc
Q 013568 226 KYSAALSILLGSLSVAFSDVVVDSMVVERARG 257 (440)
Q Consensus 226 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 257 (440)
+...++..++.|++.+.......++.+.. |+
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~~f-p~ 136 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAGVF-PS 136 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcccC-CH
Confidence 34445666778888888877777777644 44
No 280
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.36 E-value=2.6 Score=38.27 Aligned_cols=123 Identities=13% Similarity=0.259 Sum_probs=71.0
Q ss_pred cHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHHHhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 134 DNFAVAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLIKPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 134 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
.+.-+.+.|+..-.. .+....++.+..++++++....+++ ..+.|..+.....+-.-.+--|.|.|.+.-.+.+..
T Consensus 202 ~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAll---P~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiw 278 (412)
T KOG4830|consen 202 QFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALL---PMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIW 278 (412)
T ss_pred HHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhh---HHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHH
Confidence 345566677666554 5666677777777777777766665 334444333333333333333434455555566555
Q ss_pred HHHHHHHHhhhchhH-HHHHHHHHHHHHHHhhhhhhhHHHHhhhcccc
Q 013568 213 ALSWSLMATIVESKY-SAALSILLGSLSVAFSDVVVDSMVVERARGES 259 (440)
Q Consensus 213 ~~~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 259 (440)
..|...+....+..- .+++.-++.|++.+........+.+++...+.
T Consensus 279 ifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~ 326 (412)
T KOG4830|consen 279 IFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNT 326 (412)
T ss_pred HHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 555444432344332 23445577888888887777777777776654
No 281
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=85.06 E-value=10 Score=37.78 Aligned_cols=58 Identities=14% Similarity=0.146 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH
Q 013568 225 SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 225 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~ 285 (440)
+-+..++..++.|+..|........+..+..++++|..++.+.+++.. +|-.+|..++
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~---~Gl~~Gs~l~ 428 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLL---VGLALGAVLS 428 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 334556677899999999888888888888888899888888877776 7777766654
No 282
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=83.42 E-value=16 Score=36.79 Aligned_cols=62 Identities=16% Similarity=0.120 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccch
Q 013568 230 ALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGV 294 (440)
Q Consensus 230 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw 294 (440)
++.-++..+......++..++-+.+.++.--|+.|.+.+.... +|+---..+.-++++.+.+
T Consensus 409 I~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSN---LGGtWP~~~vL~lVD~fT~ 470 (544)
T PF13000_consen 409 IIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSN---LGGTWPRTFVLWLVDYFTV 470 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHh---cCCCchHHHHHHHhhhccc
Confidence 3444566666666778888899999999988888887775544 7765544455455544443
No 283
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=82.75 E-value=1.2 Score=40.69 Aligned_cols=57 Identities=12% Similarity=0.113 Sum_probs=43.3
Q ss_pred eeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhh
Q 013568 378 YFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGM 434 (440)
Q Consensus 378 ~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~ 434 (440)
|+.-+.+|+...++|.+++......++.+.+.|-+.||-|||+.-+..++...++++
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi 117 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI 117 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH
Confidence 444467899999999988776666666667788899999999987776666555544
No 284
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=82.54 E-value=3.5 Score=37.62 Aligned_cols=53 Identities=15% Similarity=0.181 Sum_probs=44.8
Q ss_pred ccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhh
Q 013568 382 NELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 382 ~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~ 435 (440)
+.+|+|..+...+.....+|..+| ++.|.+.|++|.+..+.++.+...+.+..
T Consensus 30 ~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~ 82 (250)
T PF06813_consen 30 SRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGL 82 (250)
T ss_pred HHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 678999999999999989988876 78899999999999988887777665544
No 285
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=81.30 E-value=0.49 Score=42.80 Aligned_cols=75 Identities=21% Similarity=0.332 Sum_probs=45.8
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhccc------cCcCCCCcchhhhHHH
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDS------LPLFGYRRRSYLVLSG 209 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr------~~~~G~~rr~~l~~~~ 209 (440)
..++.+.+-+. +.-.+.+..++++ .|+++...+.+..+..+.-++ .|+.|.++|. +.++| ||+.+-..+.
T Consensus 22 yGvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G-~~~~wh~~gt 99 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIG-RRMSWHLIGT 99 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhc-ceeeeeeccc
Confidence 44455555554 3444456667777 599998887776666666666 6676755543 12367 7776666665
Q ss_pred HHHHH
Q 013568 210 LLGAL 214 (440)
Q Consensus 210 ~~~~~ 214 (440)
++..+
T Consensus 100 ~lVsl 104 (412)
T KOG4830|consen 100 VLVSL 104 (412)
T ss_pred EEEEE
Confidence 44433
No 286
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=80.40 E-value=60 Score=31.62 Aligned_cols=165 Identities=16% Similarity=0.158 Sum_probs=77.0
Q ss_pred HHHHHHHHHHh-hhHHHHHHHHHHHhcCCChhhhHHHHHhhhhhH-HHHhhhhhhccccCcCCCCcchhhhHHHHH----
Q 013568 138 VAMVYFVQGVL-GLARLAVNFYLKDDLHLDPAETAVISGFSSLPW-LIKPLYGFISDSLPLFGYRRRSYLVLSGLL---- 211 (440)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~-~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~~---- 211 (440)
+.++|+..... -.-......++.+-.|-|-..++..-.+-.... .++|+.|...|+. .|++++.....+
T Consensus 32 Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~-----sr~Kvi~~~L~lqNlS 106 (503)
T KOG2601|consen 32 LYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGM-----SRVKVIQTWLLLQNLS 106 (503)
T ss_pred hhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcch-----hHHHHHHHHHhhccHH
Confidence 45556655554 233334444555533322222222111122222 2388889999984 466666544332
Q ss_pred --HHHHHHHHHhhhc-----hhHHHHHHHHHHHHHHHhhhh--hhhH--HHHhhh----cccccccchhhhHHhhhhhhh
Q 013568 212 --GALSWSLMATIVE-----SKYSAALSILLGSLSVAFSDV--VVDS--MVVERA----RGESQSVSGSLQSLCWGSSAF 276 (440)
Q Consensus 212 --~~~~~~~~~~~~~-----~~~~~~~~~~l~g~~~~~~~~--~~~~--~~~~~~----~~~~r~~~~~~~~~~~~~~~~ 276 (440)
.+.+.++..+..+ +...+..+.++.-...+.... .... +-.||. ..+.+.....+.+.....-..
T Consensus 107 v~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~ 186 (503)
T KOG2601|consen 107 VIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQS 186 (503)
T ss_pred HHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhh
Confidence 2222222222333 444444554444333332211 1111 112221 334444333333333333336
Q ss_pred HHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 277 GGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 277 g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
-.+++|.+.|.+++..+-|..-.+.++..++
T Consensus 187 tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 187 TNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 6788999999998887777655555544444
No 287
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=79.41 E-value=34 Score=30.41 Aligned_cols=85 Identities=8% Similarity=-0.046 Sum_probs=48.4
Q ss_pred HHhcCcchhhhHHHHHhhhccccccceeeeeeeccCCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC---CchhHHHHH
Q 013568 349 EAVKQPNVFLPTLFVFLWQATPHSDSAMFYFTTNELGFTPEFLGRVKFVTSVASLLGVGLYNGFLKNV---PLRKIFLAN 425 (440)
Q Consensus 349 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~---g~r~~l~~~ 425 (440)
+.+..+..+......+.+...+-......+.+ ...--|+.+-++.+..++++.+...+..|..++++ -||+....+
T Consensus 125 r~l~~~~~~~~~~lG~~wG~lPCGlVYs~l~~-A~~tgS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s~~~r~~~~rl~ 203 (232)
T COG2836 125 RLLPLKPLPGALFLGMLWGLLPCGLVYSALAY-ALSTGSAFEGALVMLAFGLGTLPNLLAMGIFSSKLSKSSRKRLNRLS 203 (232)
T ss_pred hccccCcchHHHHHHHHhcccchHHHHHHHHH-HHHcCCHHHHHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333345555555555555432211111111 11223677778888999999998888888887665 356666666
Q ss_pred HHHHHHHhh
Q 013568 426 TIFGTALGM 434 (440)
Q Consensus 426 ~~~~~~~~~ 434 (440)
..+..++++
T Consensus 204 ~gl~~v~g~ 212 (232)
T COG2836 204 GGLMVVVGL 212 (232)
T ss_pred hHHHHHHHH
Confidence 555544443
No 288
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=75.62 E-value=24 Score=33.30 Aligned_cols=135 Identities=21% Similarity=0.196 Sum_probs=77.5
Q ss_pred HHHHHhhhhhHHH-HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhH
Q 013568 171 AVISGFSSLPWLI-KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDS 249 (440)
Q Consensus 171 g~~~s~~~l~~~~-~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 249 (440)
|.+...-.++..+ +...-.+.||++ +| .|..+ ..++.+.+..+.+ ++++.++-+++..+..++.|......-+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfp-f~--~Ri~~--~v~~sa~s~~lVa-fs~s~~~sL~GV~~aSissGlGEiTFL~ 138 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFP-FG--FRIAL--VVLLSALSFFLVA-FSNSVPMSLLGVVFASISSGLGEITFLA 138 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcc-cc--hHHHH--HHHHHhcceEEEE-eccchhHHHhhhhhhhhcCCcceeehhh
Confidence 3333334455544 666677788973 55 44332 2234555555556 6777888888888888888776655544
Q ss_pred HHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhh--ccchHHHHHHHHHHHHHHHHhh-eeecccc
Q 013568 250 MVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVD--AYGVRFVFGVTALLPLITSGVA-VLVKEQQ 319 (440)
Q Consensus 250 ~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~--~~gw~~~f~i~~~~~~~~~~~~-~~~~e~~ 319 (440)
+-+.. ++. ..+-++.+.+ .++++|..--..+.+ ....+....++..+.++.++.+ +.+++++
T Consensus 139 lss~Y-~~~----~i~~WSSGTG---gAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pe 203 (409)
T KOG3880|consen 139 LSSRY-PSI----VIAGWSSGTG---GAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPE 203 (409)
T ss_pred hhccC-CCc----eeccccCCCC---cchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence 43322 222 2223443444 455666655555554 3457888888877776666644 4555544
No 289
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=75.31 E-value=68 Score=29.57 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 013568 394 VKFVTSVASLLGVGLYNGFLK 414 (440)
Q Consensus 394 ~~~~~~i~~~~g~~~~~~l~~ 414 (440)
...+..+|++++.++...+.+
T Consensus 167 ~~lPqaiGm~i~a~i~~~~~~ 187 (269)
T PF06800_consen 167 AFLPQAIGMLIGAFIFNLFSK 187 (269)
T ss_pred hHHHHHHHHHHHHHHHhhccc
Confidence 334677777777777776543
No 290
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=72.37 E-value=1e+02 Score=30.29 Aligned_cols=29 Identities=10% Similarity=-0.010 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHhhhc
Q 013568 228 SAALSILLGSLSVAFSDVVVDSMVVERAR 256 (440)
Q Consensus 228 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 256 (440)
..+++..+.+++.+.......+..+++-+
T Consensus 119 vt~~~vv~~~~a~a~~qgs~~G~a~~~P~ 147 (406)
T KOG1479|consen 119 VTLIIVVLLNLANAVVQGSLYGLAGLFPS 147 (406)
T ss_pred HHHHHHHHHhhhhhhhccchhhhhhcCCH
Confidence 34556677777777777777777776633
No 291
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=71.87 E-value=88 Score=29.30 Aligned_cols=27 Identities=19% Similarity=0.215 Sum_probs=16.8
Q ss_pred HHHHHHhcCCChhhhHHHHHhhhhhHH
Q 013568 156 NFYLKDDLHLDPAETAVISGFSSLPWL 182 (440)
Q Consensus 156 ~~~l~~~~g~s~~~~g~~~s~~~l~~~ 182 (440)
...+.|..|+.....++..++..+.++
T Consensus 48 laLLADa~Hml~D~~al~lal~A~~~a 74 (296)
T COG1230 48 LALLADALHMLSDALALLLALIAIKLA 74 (296)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 345677777777777776555554433
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=64.42 E-value=2.5 Score=39.96 Aligned_cols=56 Identities=18% Similarity=0.228 Sum_probs=3.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHH
Q 013568 227 YSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFS 285 (440)
Q Consensus 227 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~ 285 (440)
+..++..++.|+..|-.......+..+..++++|..++.+.+++.. +|-.+|..++
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~---~Gl~~Gs~ls 304 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLS---FGLFIGSVLS 304 (309)
T ss_dssp ------------------HHHH-------------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 4456667889999999888888888999999999888888877766 7777666554
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.01 E-value=14 Score=28.41 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=17.1
Q ss_pred HhhhhhhccccCcCCCCcchhhhHHHHHH
Q 013568 184 KPLYGFISDSLPLFGYRRRSYLVLSGLLG 212 (440)
Q Consensus 184 ~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~ 212 (440)
+...||+.|++ +| -+|+.++..+++
T Consensus 59 Ga~iG~llD~~--ag--TsPwglIv~lll 83 (116)
T COG5336 59 GAGIGWLLDKF--AG--TSPWGLIVFLLL 83 (116)
T ss_pred HHHHHHHHHHh--cC--CCcHHHHHHHHH
Confidence 56789999997 66 677665544333
No 294
>COG1288 Predicted membrane protein [Function unknown]
Probab=58.34 E-value=84 Score=31.04 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHH-hhhccchHHHHHHHHHHHHHHHHhh
Q 013568 276 FGGIVSSYFSGS-MVDAYGVRFVFGVTALLPLITSGVA 312 (440)
Q Consensus 276 ~g~~ig~~i~g~-l~~~~gw~~~f~i~~~~~~~~~~~~ 312 (440)
.+..++.-++|. +.+..+||...|+...+..+..+.+
T Consensus 199 F~~~IAq~iAGip~~sG~~~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 199 FATVIAQNIAGIPFLSGMGLRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred hHHHHHhhhcCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 444455555553 5566789999998877665554433
No 295
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=57.06 E-value=32 Score=32.45 Aligned_cols=63 Identities=14% Similarity=0.039 Sum_probs=45.8
Q ss_pred hhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHH
Q 013568 222 IVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGS 287 (440)
Q Consensus 222 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~ 287 (440)
+.++.+...+..+.-|+..|...+...--+.+-.++++|..+++..++.-. +|..++.+++-.
T Consensus 338 ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS---~Gi~lA~~lalp 400 (409)
T KOG3880|consen 338 FTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDS---IGIFLAGLLALP 400 (409)
T ss_pred hccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecch---hhHHHHHHHhcc
Confidence 456777777777888888887776666666666678888888888876666 777666665543
No 296
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=51.16 E-value=2.4e+02 Score=27.39 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=68.9
Q ss_pred HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccc
Q 013568 184 KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVS 263 (440)
Q Consensus 184 ~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 263 (440)
....|.+--++.++| ...+.++.+.-+.+.+.++ ..++.+...++.++....+.+..+++..-++.-...|.-|..
T Consensus 288 ~~~~g~l~i~w~r~g---~~ll~~~s~~~agllf~m~-~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLv 363 (433)
T KOG3810|consen 288 ALAAGYLNINWNRWG---DLLLAVGSAVQAGLLFIMA-QTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLV 363 (433)
T ss_pred HHHHHheeeccchhh---HHHHHHHHHHhhhhhhhhh-cccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheee
Confidence 455677766642222 3344445555555555555 567778878888888777777777777777777777776665
Q ss_pred hhhhHHhhhhhhhHHHHHHHHHHHhhhccc-----------hHHHHHHHHHHHHHHHH
Q 013568 264 GSLQSLCWGSSAFGGIVSSYFSGSMVDAYG-----------VRFVFGVTALLPLITSG 310 (440)
Q Consensus 264 ~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g-----------w~~~f~i~~~~~~~~~~ 310 (440)
.|+..+ ++-++=.++.-.+++.-| +..-|.+.+++.++...
T Consensus 364 FGiNTF------vAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~ 415 (433)
T KOG3810|consen 364 FGINTF------VALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFG 415 (433)
T ss_pred eehHHH------HHHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHH
Confidence 555542 444444444444444221 33446666666666544
No 297
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=50.44 E-value=1.7e+02 Score=25.43 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=27.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhccCC---chhHHHHHHHHHHH
Q 013568 387 TPEFLGRVKFVTSVASLLGVGLYNGFLKNVP---LRKIFLANTIFGTA 431 (440)
Q Consensus 387 s~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g---~r~~l~~~~~~~~~ 431 (440)
|+..-..++..++++.+...+..+....+.+ +|+....+.++..+
T Consensus 148 s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~~~~~~~r~~g~~~i~ 195 (199)
T PF13386_consen 148 SPLYGALLMLAFGLGTLPALLLAGLLAGKLSRRLRRRLLRLAGVLLII 195 (199)
T ss_pred ChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666677778888888877777666554433 34444444444433
No 298
>PRK03612 spermidine synthase; Provisional
Probab=50.33 E-value=2.8e+02 Score=28.43 Aligned_cols=15 Identities=13% Similarity=0.270 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHhh
Q 013568 229 AALSILLGSLSVAFS 243 (440)
Q Consensus 229 ~~~~~~l~g~~~~~~ 243 (440)
+++..++.|++.|..
T Consensus 54 ~ii~~fl~glalGs~ 68 (521)
T PRK03612 54 TVIGLMLFAMGVGAL 68 (521)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344455555555443
No 299
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=50.16 E-value=55 Score=32.03 Aligned_cols=62 Identities=11% Similarity=-0.033 Sum_probs=44.9
Q ss_pred HHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHH
Q 013568 234 LLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVF 298 (440)
Q Consensus 234 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f 298 (440)
.+.++..........++.+.+.++.-.|+.+++.+.... +|+---..+..++++.++|+-++
T Consensus 377 ~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsn---LGg~wp~tv~l~l~D~ltv~~C~ 438 (510)
T KOG3574|consen 377 AFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSN---LGGNWPGTVALWLADGLTVKQCV 438 (510)
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHH---hcCCcHHHHHHHhcccCceeecc
Confidence 444444555666778888999999998988888776555 88877777777777776666544
No 300
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.82 E-value=1.2e+02 Score=30.04 Aligned_cols=34 Identities=21% Similarity=0.449 Sum_probs=24.4
Q ss_pred hHHHHHhhhhhHHH-Hhhhhhhcccc-CcCCCCcchh
Q 013568 170 TAVISGFSSLPWLI-KPLYGFISDSL-PLFGYRRRSY 204 (440)
Q Consensus 170 ~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G~~rr~~ 204 (440)
-|.+.+...+.|++ +|+.|+.+..+ .+.| +|+++
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~g-G~~Wi 360 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLG-GRRWI 360 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhc-cHHHH
Confidence 56666777778888 78888888776 5567 56554
No 301
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=49.58 E-value=71 Score=24.49 Aligned_cols=24 Identities=21% Similarity=0.221 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHhhccCCchhH
Q 013568 398 TSVASLLGVGLYNGFLKNVPLRKI 421 (440)
Q Consensus 398 ~~i~~~~g~~~~~~l~~r~g~r~~ 421 (440)
+.+..++|.+++-|+-++++....
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~~ 75 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPFS 75 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcH
Confidence 334455666666666566665443
No 302
>COG2119 Predicted membrane protein [Function unknown]
Probab=48.81 E-value=1.8e+02 Score=25.13 Aligned_cols=40 Identities=18% Similarity=0.144 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhh
Q 013568 396 FVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMT 435 (440)
Q Consensus 396 ~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~ 435 (440)
....++.+++.+.+.++.+|+..|++-..+.++..++++.
T Consensus 141 lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~ 180 (190)
T COG2119 141 LGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALV 180 (190)
T ss_pred HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 4455678888888899999999999998888777776643
No 303
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=47.46 E-value=2.8e+02 Score=26.97 Aligned_cols=28 Identities=7% Similarity=-0.090 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhHHHHh
Q 013568 226 KYSAALSILLGSLSVAFSDVVVDSMVVE 253 (440)
Q Consensus 226 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 253 (440)
-+.+.+.-++.|.-.|...+....++-.
T Consensus 105 ~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 105 RLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 3445566677777778777666665544
No 304
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=47.35 E-value=1.5e+02 Score=26.88 Aligned_cols=20 Identities=10% Similarity=0.190 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 013568 394 VKFVTSVASLLGVGLYNGFL 413 (440)
Q Consensus 394 ~~~~~~i~~~~g~~~~~~l~ 413 (440)
...+.++|+++++++.+..-
T Consensus 181 aiLPqAiGMv~~ali~~~~~ 200 (288)
T COG4975 181 AILPQAIGMVIGALILGFFK 200 (288)
T ss_pred hhhHHHHHHHHHHHHHhhcc
Confidence 44678889999998888765
No 305
>PRK10263 DNA translocase FtsK; Provisional
Probab=45.94 E-value=1.3e+02 Score=34.26 Aligned_cols=10 Identities=10% Similarity=0.149 Sum_probs=5.8
Q ss_pred Hhhhhhhccc
Q 013568 184 KPLYGFISDS 193 (440)
Q Consensus 184 ~~~~g~l~Dr 193 (440)
++++.+++|-
T Consensus 65 GiVGA~LAD~ 74 (1355)
T PRK10263 65 GMPGAWLADT 74 (1355)
T ss_pred chHHHHHHHH
Confidence 4555666664
No 306
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=45.67 E-value=3.7e+02 Score=27.96 Aligned_cols=16 Identities=6% Similarity=0.052 Sum_probs=7.9
Q ss_pred ChhhHHHHHHHHHHHH
Q 013568 387 TPEFLGRVKFVTSVAS 402 (440)
Q Consensus 387 s~~~~g~~~~~~~i~~ 402 (440)
+....+.++..+++|.
T Consensus 323 ~~~~g~~~l~~~gLG~ 338 (571)
T PRK00293 323 DLLLGGLTLYLLALGM 338 (571)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 3434445555555555
No 307
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=44.06 E-value=79 Score=28.91 Aligned_cols=25 Identities=12% Similarity=0.224 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHhheeecccc
Q 013568 295 RFVFGVTALLPLITSGVAVLVKEQQ 319 (440)
Q Consensus 295 ~~~f~i~~~~~~~~~~~~~~~~e~~ 319 (440)
.+.-++..++.+++.+++.+++.++
T Consensus 115 ~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 115 PWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hHHHHHHHHHHHHHHHheeeecCCC
Confidence 3444444455555555566665443
No 308
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=42.30 E-value=3.8e+02 Score=27.12 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhccc-ccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 013568 233 ILLGSLSVAFSDVVVDSMVVERARGE-SQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLI 307 (440)
Q Consensus 233 ~~l~g~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~ 307 (440)
.++.++.........-..+.+.+|.. +|...++-+....+ +..++..++++.+.+.+||.....+..++.++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~g---i~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTG---VVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34555666666666677777777653 45555555544433 66666677778999999999988887766655
No 309
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=41.10 E-value=69 Score=24.89 Aligned_cols=17 Identities=12% Similarity=0.063 Sum_probs=10.1
Q ss_pred ccCCchhHHHHHHHHHH
Q 013568 414 KNVPLRKIFLANTIFGT 430 (440)
Q Consensus 414 ~r~g~r~~l~~~~~~~~ 430 (440)
+|..+++.+....+...
T Consensus 84 er~~~~~~~a~~l~~~G 100 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIG 100 (113)
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 67777776655444433
No 310
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=35.64 E-value=80 Score=20.45 Aligned_cols=14 Identities=14% Similarity=0.069 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHH
Q 013568 295 RFVFGVTALLPLIT 308 (440)
Q Consensus 295 ~~~f~i~~~~~~~~ 308 (440)
.+.-++.+++..+.
T Consensus 25 ~~~~~i~aviGAii 38 (48)
T PF04226_consen 25 SWGSFIVAVIGAII 38 (48)
T ss_pred hHHHHHHHHHHHHH
Confidence 44444444444433
No 311
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=35.55 E-value=86 Score=28.09 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHH
Q 013568 389 EFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTI 427 (440)
Q Consensus 389 ~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~ 427 (440)
...++......++..++.++.|++.||+|+|+.+..+..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 77 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLL 77 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHH
Confidence 467788888888888888999999999998877766654
No 312
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=35.16 E-value=13 Score=35.22 Aligned_cols=20 Identities=10% Similarity=0.014 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 013568 394 VKFVTSVASLLGVGLYNGFL 413 (440)
Q Consensus 394 ~~~~~~i~~~~g~~~~~~l~ 413 (440)
.+..+.++-++|+.+..+..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~ 206 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPR 206 (309)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHhcchhcceeE
Confidence 45668889999999888753
No 313
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=34.41 E-value=3.7e+02 Score=24.64 Aligned_cols=31 Identities=6% Similarity=0.250 Sum_probs=21.1
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhcccccccc
Q 013568 233 ILLGSLSVAFSDVVVDSMVVERARGESQSVS 263 (440)
Q Consensus 233 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 263 (440)
.++.=...+.=+....+++.+..|+++|.++
T Consensus 23 l~~lE~vL~iDN~iviai~~~~Lp~~qr~ra 53 (254)
T COG0861 23 LILLEIVLGIDNAIVIAILASKLPPKQRKKA 53 (254)
T ss_pred HHHHHHHHHhhHHHHHHHHHhhCCHHHHHHH
Confidence 3344444556666778888999998887654
No 314
>PF11345 DUF3147: Protein of unknown function (DUF3147); InterPro: IPR021493 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=34.31 E-value=2.2e+02 Score=22.12 Aligned_cols=33 Identities=12% Similarity=0.134 Sum_probs=16.3
Q ss_pred hhHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHH
Q 013568 275 AFGGIVSSYFSGSMVDA-YGVRFVFGVTALLPLI 307 (440)
Q Consensus 275 ~~g~~ig~~i~g~l~~~-~gw~~~f~i~~~~~~~ 307 (440)
..|.++.-++..+...+ .+|...+....+.-++
T Consensus 65 ~~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~W~v 98 (108)
T PF11345_consen 65 MIGTIICVLVVWFLLKASHGWLLSIILGLIVWFV 98 (108)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 35555545555555444 5676655443333333
No 315
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=34.26 E-value=13 Score=33.86 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCch
Q 013568 391 LGRVKFVTSVASLLGVGLYNGFLKNVPLR 419 (440)
Q Consensus 391 ~g~~~~~~~i~~~~g~~~~~~l~~r~g~r 419 (440)
+|++..+..+..+++.+++.|+..++|..
T Consensus 107 ~Gi~~l~l~~lLaL~vW~Ym~lLr~~GAs 135 (381)
T PF05297_consen 107 VGIVILFLCCLLALGVWFYMWLLRELGAS 135 (381)
T ss_dssp -----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 44444444444555555555556666543
No 316
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=34.22 E-value=1.1e+02 Score=30.19 Aligned_cols=57 Identities=14% Similarity=0.085 Sum_probs=39.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHH
Q 013568 225 SKYSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYF 284 (440)
Q Consensus 225 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i 284 (440)
+-+..++...+.|+..|-.......+...-.+++++..++.+..+... .|...|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~---~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLV---GGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHH---HHHHHhhHH
Confidence 445566777888898888888888888888888887777666665554 444444433
No 317
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=33.81 E-value=3.2e+02 Score=23.83 Aligned_cols=28 Identities=14% Similarity=0.287 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHhhhccchHHHHHHHHHH
Q 013568 276 FGGIVSSYFSGSMVDAYGVRFVFGVTALL 304 (440)
Q Consensus 276 ~g~~ig~~i~g~l~~~~gw~~~f~i~~~~ 304 (440)
++-++|..+++.+.+..+. +..++.+++
T Consensus 173 ~~f~~Ga~~ga~l~~~~~~-~al~~~~~~ 200 (209)
T PF06912_consen 173 LSFFIGAILGALLYRRLGF-WALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 5666677777777777774 444444433
No 318
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=32.46 E-value=6.6e+02 Score=26.98 Aligned_cols=58 Identities=9% Similarity=0.081 Sum_probs=29.4
Q ss_pred Hhhhhhhcccc-CcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhh
Q 013568 184 KPLYGFISDSL-PLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFS 243 (440)
Q Consensus 184 ~~~~g~l~Dr~-~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 243 (440)
+.+.+-++|.= +..| |.+-++++.+++.++.+......+..+.+....++.+++.++.
T Consensus 40 G~ia~al~D~d~~~~~--R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 40 GIIAAALVDLDDRLTG--RLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HHHhhccCCCCCcHHH--HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 45556667752 1233 3444455555665555554434455555555555555554443
No 319
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=32.25 E-value=1.1e+02 Score=30.75 Aligned_cols=101 Identities=16% Similarity=0.060 Sum_probs=51.5
Q ss_pred HhhhhhhccccCcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHhhhhhhhHHHHhhhccc-----
Q 013568 184 KPLYGFISDSLPLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAFSDVVVDSMVVERARGE----- 258 (440)
Q Consensus 184 ~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~----- 258 (440)
+...-+++|| +| .||.++.... .+.++..+.+ ...+......-+-..|+-.+....+-++.++.....+
T Consensus 349 S~~~~~l~~~---~g-~r~~y~~~~~-~f~~~~~~~g-l~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~ 422 (498)
T KOG0637|consen 349 SLLVEKLSRK---FG-TRKRYWGGVN-AFGLATGLAG-LVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAI 422 (498)
T ss_pred HHHHHHHHHh---cC-cceEEeehhH-HHHHHHHHHh-hhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCcccc
Confidence 5556777887 56 4555554443 2333322333 3455555555555555444433333333333322111
Q ss_pred ------------------ccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccc
Q 013568 259 ------------------SQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYG 293 (440)
Q Consensus 259 ------------------~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~g 293 (440)
.+|...++.+.... +..++.....|.+.+..|
T Consensus 423 t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~---ipQvivs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 423 TFSIPFALASIEIGNSGLGQGLDLGVLNCAIV---IPQVLVSLGLGPLDQLFG 472 (498)
T ss_pred ccccccccccccccCccCCCCceeeeeeeeee---ehhheeeccccchhhhcC
Confidence 12444555555555 777777777777777665
No 320
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.91 E-value=1e+02 Score=23.86 Aligned_cols=20 Identities=15% Similarity=0.082 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhhccC-CchhH
Q 013568 401 ASLLGVGLYNGFLKNV-PLRKI 421 (440)
Q Consensus 401 ~~~~g~~~~~~l~~r~-g~r~~ 421 (440)
+.++| ...||+.||+ |....
T Consensus 55 GilVG-a~iG~llD~~agTsPw 75 (116)
T COG5336 55 GILVG-AGIGWLLDKFAGTSPW 75 (116)
T ss_pred HHHHH-HHHHHHHHHhcCCCcH
Confidence 33444 4568888886 44433
No 321
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=31.50 E-value=1.3e+02 Score=23.36 Aligned_cols=43 Identities=14% Similarity=0.094 Sum_probs=32.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q 013568 388 PEFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGT 430 (440)
Q Consensus 388 ~~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~ 430 (440)
+...|-.++..+...++.+++.+|..|+....+.=.++..++.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L 95 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICL 95 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHH
Confidence 3567888888888889999999999998876555555444443
No 322
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=31.41 E-value=6.6e+02 Score=26.96 Aligned_cols=59 Identities=12% Similarity=0.078 Sum_probs=30.5
Q ss_pred HHHhhhhhhcccc-CcCCCCcchhhhHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHh
Q 013568 182 LIKPLYGFISDSL-PLFGYRRRSYLVLSGLLGALSWSLMATIVESKYSAALSILLGSLSVAF 242 (440)
Q Consensus 182 ~~~~~~g~l~Dr~-~~~G~~rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 242 (440)
.++.+.+-++|.= +..| |.+-++++.++++++.+......+..+.+....++.+++.++
T Consensus 38 ~lG~ia~~l~D~~~~~~~--R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 38 CLGIIAAGLDDLDDRLTG--RLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HHhhHhhccCCCCccHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 3355666677752 1123 444555666666666555553444445555555555555444
No 323
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=30.45 E-value=1.6e+02 Score=22.56 Aligned_cols=26 Identities=4% Similarity=-0.106 Sum_probs=11.8
Q ss_pred HHHHHHHhhhccc----hHHHHHHHHHHHH
Q 013568 281 SSYFSGSMVDAYG----VRFVFGVTALLPL 306 (440)
Q Consensus 281 g~~i~g~l~~~~g----w~~~f~i~~~~~~ 306 (440)
|.++|-|+=.+++ |..+|.+.+++..
T Consensus 59 G~~lG~WLD~~~~t~~~~tl~~lllGv~~G 88 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPFSWTLTMLIVGVVIG 88 (100)
T ss_pred HHHHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 3333334444444 4555555554433
No 324
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=29.35 E-value=3e+02 Score=28.67 Aligned_cols=60 Identities=18% Similarity=0.089 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhh
Q 013568 227 YSAALSILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMV 289 (440)
Q Consensus 227 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~ 289 (440)
.+++--.++.|++..+..+...-+.-+-+|++.|+.+.+++....+ +|..++..+...+.
T Consensus 459 ~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a---~G~~lss~Lv~~v~ 518 (571)
T KOG1237|consen 459 LWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVA---VGNYLSSVLVSLVQ 518 (571)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 4455566889999999888888888888999999988888887777 88888777775543
No 325
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=27.99 E-value=6.6e+02 Score=25.59 Aligned_cols=74 Identities=20% Similarity=0.183 Sum_probs=46.3
Q ss_pred HHHHHHHHhhhhhhhHHHHhhhcccc-cccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 013568 234 LLGSLSVAFSDVVVDSMVVERARGES-QSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFGVTALLPLITSG 310 (440)
Q Consensus 234 ~l~g~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~i~~~~~~~~~~ 310 (440)
+..|+.........-..+.+.+|+.+ ....++-++...+ +-.++-.++++.+.+.+||+....+.-++.++..+
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tG---ivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTG---IVTIIMMFLSSNIIRRFGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHH
Confidence 44555556666667777777776543 3333333333333 55555557888889999999998887665555443
No 326
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=27.68 E-value=5.1e+02 Score=26.57 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=20.0
Q ss_pred CChhhhHHHHHhhhhhHHH-Hhhhhhhcccc-CcCC
Q 013568 165 LDPAETAVISGFSSLPWLI-KPLYGFISDSL-PLFG 198 (440)
Q Consensus 165 ~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr~-~~~G 198 (440)
.++..-|.+.+...+.+++ +.+.|+.+-|+ ..+|
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~ 325 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFG 325 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcC
Confidence 3444445555555566666 66778877776 3345
No 327
>PRK15015 carbon starvation protein A; Provisional
Probab=26.83 E-value=4.8e+02 Score=27.54 Aligned_cols=23 Identities=17% Similarity=0.187 Sum_probs=13.0
Q ss_pred hHHHHHHHHHHHhhhccchHH-HHHHHH
Q 013568 276 FGGIVSSYFSGSMVDAYGVRF-VFGVTA 302 (440)
Q Consensus 276 ~g~~ig~~i~g~l~~~~gw~~-~f~i~~ 302 (440)
.|+++||.++. .+||-- ..|+..
T Consensus 99 AGPivGPvlAa----~~GwlP~~LWIl~ 122 (701)
T PRK15015 99 AGPLVGPVLAA----QMGYLPGMIWLLA 122 (701)
T ss_pred cCccHHHHHHH----HHcchHHHHHHHH
Confidence 56666666654 578853 334433
No 328
>PRK02237 hypothetical protein; Provisional
Probab=26.63 E-value=2e+02 Score=22.31 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHH
Q 013568 389 EFLGRVKFVTSVASLLGVGLYNGFLKNVPLRKIFLANTIFGT 430 (440)
Q Consensus 389 ~~~g~~~~~~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~ 430 (440)
...|-.++..+...++.+++.+|..|+...-+.=.++..++.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L 97 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICL 97 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHH
Confidence 457888899888899999999999998865555444444433
No 329
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=26.22 E-value=3e+02 Score=25.26 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHhhhhh
Q 013568 399 SVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALGMTQV 437 (440)
Q Consensus 399 ~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~~~~l 437 (440)
.++..++...+-.+..|+..|.+.+.++++..++++..+
T Consensus 250 ~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~Fgl~~i 288 (294)
T KOG2881|consen 250 ALCTGLAVIGGKYLASKISVRTVTLIGGILFIIFGLVYI 288 (294)
T ss_pred HHHHHHHHhhhHHHhhhheeEEEEEecchhHHHHHHHHH
Confidence 344444444444566888888888888888877776543
No 330
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=25.41 E-value=1.9e+02 Score=20.22 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=17.7
Q ss_pred ccchHHHHHHHHHHHHHHHH-hheeeccccccC
Q 013568 291 AYGVRFVFGVTALLPLITSG-VAVLVKEQQVLG 322 (440)
Q Consensus 291 ~~gw~~~f~i~~~~~~~~~~-~~~~~~e~~~~~ 322 (440)
.-||-.+|.+...+.++.+- +-.++||+.+..
T Consensus 27 Gag~Aav~~~~~~~~l~~~~~iG~~LPe~s~~a 59 (67)
T PF11511_consen 27 GAGYAAVFFLGLWFLLVALYFIGLLLPERSRQA 59 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSTTTCSS-
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhCchhcccC
Confidence 34566666655554444333 455788876543
No 331
>COG3275 LytS Putative regulator of cell autolysis [Signal transduction mechanisms]
Probab=24.21 E-value=5.6e+02 Score=25.94 Aligned_cols=16 Identities=13% Similarity=0.407 Sum_probs=8.9
Q ss_pred hhhHHH--Hhhhhhhccc
Q 013568 178 SLPWLI--KPLYGFISDS 193 (440)
Q Consensus 178 ~l~~~~--~~~~g~l~Dr 193 (440)
.++|.+ .|++-++..+
T Consensus 17 i~a~~l~k~~lf~~lm~~ 34 (557)
T COG3275 17 IIAFFLSKTPLFIPLMQV 34 (557)
T ss_pred HHHHHHhccHHHHHHHHh
Confidence 344554 4666666555
No 332
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=24.14 E-value=6.5e+02 Score=24.25 Aligned_cols=119 Identities=9% Similarity=0.109 Sum_probs=53.6
Q ss_pred hHHHHHhhhhhHHHHhhhhhhccccCcCCCCcchhhhHHHHHHH--HH-HHHHHhhhchhHHHHHHHHHHHHHHHhhhhh
Q 013568 170 TAVISGFSSLPWLIKPLYGFISDSLPLFGYRRRSYLVLSGLLGA--LS-WSLMATIVESKYSAALSILLGSLSVAFSDVV 246 (440)
Q Consensus 170 ~g~~~s~~~l~~~~~~~~g~l~Dr~~~~G~~rr~~l~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 246 (440)
+|.+.....+...++|+.+++.+. .| .-|-+..+.++.. .+ .+... .+++.......-.+.|...|....-
T Consensus 49 ~GI~~laP~la~~l~~vi~Pl~~~---~G--aDPamfa~tiLA~DMGGY~LA~~-la~~~~~~~fsG~ilgsmlG~TIvF 122 (354)
T PF04346_consen 49 AGIMALAPVLAAFLSPVIGPLFQA---IG--ADPAMFAGTILANDMGGYQLAME-LAQDPEAGIFSGLILGSMLGATIVF 122 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---hC--CCHHHHHHHHhhhcCcCHHHHHH-HcCChhhHHHHHHHHHHhhcccEEe
Confidence 444444444555557788888887 45 6666666544321 11 12222 4455444444434444444442222
Q ss_pred hhHHHHhhhcccccccchhhhHHhhhhhhhHHHHHHHHHHHhhhccchHHHHH
Q 013568 247 VDSMVVERARGESQSVSGSLQSLCWGSSAFGGIVSSYFSGSMVDAYGVRFVFG 299 (440)
Q Consensus 247 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ig~~i~g~l~~~~gw~~~f~ 299 (440)
.-...-.+.++|+|.. +..+..++-+.--+|.+++|.+. .+++...+.
T Consensus 123 tIPVaLgii~k~D~~y----~a~Gil~GiitIPiG~~vggl~~-g~~~~~il~ 170 (354)
T PF04346_consen 123 TIPVALGIIEKEDHKY----LAKGILAGIITIPIGCFVGGLIA-GFDIGMILI 170 (354)
T ss_pred ehhhhhhhcChhhhHH----HHHHHHHHHhhhCHHHHHHHHHH-hCCHHHHHH
Confidence 2222333445555431 22222211133335556666554 345554443
No 333
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=24.06 E-value=4.4e+02 Score=26.46 Aligned_cols=41 Identities=7% Similarity=-0.076 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcCCChhhhHHHHHhhhhhHHH-Hhhhhhhccc
Q 013568 151 ARLAVNFYLKDDLHLDPAETAVISGFSSLPWLI-KPLYGFISDS 193 (440)
Q Consensus 151 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~~-~~~~g~l~Dr 193 (440)
+..|....+-+.+|++.+..|+.. ...+..+ ..+...+.-|
T Consensus 442 LMVWwa~~iGeT~gIp~eIMGLTi--LAAGTSIPDlitSvIVAR 483 (588)
T KOG1307|consen 442 LMVWWANIIGETLGIPDEIMGLTI--LAAGTSIPDLITSVIVAR 483 (588)
T ss_pred HHHHHHHHcccccCCCHHHhhhhh--hhcCCchHHhhHhhhhcc
Confidence 344555556667899999888753 2223333 4455666665
No 334
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=23.12 E-value=4.7e+02 Score=24.19 Aligned_cols=19 Identities=11% Similarity=0.074 Sum_probs=8.1
Q ss_pred chhHHHHHHHHHHHHHHHh
Q 013568 224 ESKYSAALSILLGSLSVAF 242 (440)
Q Consensus 224 ~~~~~~~~~~~l~g~~~~~ 242 (440)
+..+.+.+..++.+|+.++
T Consensus 21 ~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 21 PYPWLLILVLALLTFFFGM 39 (284)
T ss_pred hccHHHHHHHHHHHHHHHH
Confidence 3444444444444444443
No 335
>PRK10263 DNA translocase FtsK; Provisional
Probab=22.52 E-value=5.8e+02 Score=29.45 Aligned_cols=20 Identities=20% Similarity=0.644 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHHhhhccch
Q 013568 275 AFGGIVSSYFSGSMVDAYGV 294 (440)
Q Consensus 275 ~~g~~ig~~i~g~l~~~~gw 294 (440)
|.++.+|..++..+...+|+
T Consensus 62 Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccchHHHHHHHHHHHHHhH
Confidence 36777777777777666675
No 336
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=21.06 E-value=29 Score=27.98 Aligned_cols=16 Identities=13% Similarity=0.193 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 013568 295 RFVFGVTALLPLITSG 310 (440)
Q Consensus 295 ~~~f~i~~~~~~~~~~ 310 (440)
||+++++.++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4665555444444333
No 337
>PRK11588 hypothetical protein; Provisional
Probab=20.93 E-value=9.1e+02 Score=24.71 Aligned_cols=21 Identities=24% Similarity=0.256 Sum_probs=12.4
Q ss_pred hhhccchHHHHHHHHHHHHHH
Q 013568 288 MVDAYGVRFVFGVTALLPLIT 308 (440)
Q Consensus 288 l~~~~gw~~~f~i~~~~~~~~ 308 (440)
+.+..+||.+.++......+.
T Consensus 225 ~~SG~~~R~i~~~v~~~i~i~ 245 (506)
T PRK11588 225 VLSGSGLRIVMWVIFTLIGLI 245 (506)
T ss_pred ccccHHHHHHHHHHHHHHHHH
Confidence 334467898877765444333
No 338
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=20.92 E-value=2.5e+02 Score=23.44 Aligned_cols=36 Identities=0% Similarity=-0.160 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHh
Q 013568 398 TSVASLLGVGLYNGFLKNVPLRKIFLANTIFGTALG 433 (440)
Q Consensus 398 ~~i~~~~g~~~~~~l~~r~g~r~~l~~~~~~~~~~~ 433 (440)
.-....+..++.+.+.+++|.|..++++.++-++..
T Consensus 46 ~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~ 81 (156)
T PF05978_consen 46 LYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYI 81 (156)
T ss_pred HHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 334445566777888899999999998887766443
No 339
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=20.74 E-value=8.7e+02 Score=24.40 Aligned_cols=18 Identities=17% Similarity=0.167 Sum_probs=13.0
Q ss_pred hhhhHHH--Hhhhhhhcccc
Q 013568 177 SSLPWLI--KPLYGFISDSL 194 (440)
Q Consensus 177 ~~l~~~~--~~~~g~l~Dr~ 194 (440)
...++.+ .|+...+.||+
T Consensus 68 lvtG~~lA~sp~v~r~l~~l 87 (453)
T PF02667_consen 68 LVTGYALASSPPVKRLLDRL 87 (453)
T ss_pred HHHHHHHhCChHHHHHHHHH
Confidence 3456666 68888888886
No 340
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=20.63 E-value=2.8e+02 Score=23.60 Aligned_cols=26 Identities=31% Similarity=0.627 Sum_probs=11.7
Q ss_pred cCCChhhh-HH-HHHhhhhhHHHHhhhh
Q 013568 163 LHLDPAET-AV-ISGFSSLPWLIKPLYG 188 (440)
Q Consensus 163 ~g~s~~~~-g~-~~s~~~l~~~~~~~~g 188 (440)
+|+++-.+ |+ .+++..++|+++|..|
T Consensus 72 ~GlDP~~~~g~~t~a~g~lG~L~GP~~G 99 (173)
T PF08566_consen 72 MGLDPFMVYGLATLACGALGWLVGPSLG 99 (173)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHhcchHH
Confidence 46666442 21 2333445555555443
Done!