Query 013571
Match_columns 440
No_of_seqs 207 out of 1616
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 05:12:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013571.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013571hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02693 IAA-amino acid hydrol 100.0 5.3E-59 1.1E-63 465.3 47.4 391 41-434 33-423 (437)
2 PLN02280 IAA-amino acid hydrol 100.0 4E-59 8.7E-64 468.8 45.0 380 55-434 97-476 (478)
3 PRK08588 succinyl-diaminopimel 100.0 2.5E-54 5.4E-59 427.9 38.2 359 55-433 2-377 (377)
4 COG1473 AbgB Metal-dependent a 100.0 7.6E-53 1.6E-57 407.7 43.6 375 55-434 12-391 (392)
5 PRK06915 acetylornithine deace 100.0 7.6E-54 1.7E-58 430.3 37.9 373 41-435 5-421 (422)
6 TIGR01891 amidohydrolases amid 100.0 6.7E-53 1.4E-57 415.1 40.4 356 58-417 2-360 (363)
7 PRK13013 succinyl-diaminopimel 100.0 5.4E-52 1.2E-56 417.8 39.8 372 42-434 3-424 (427)
8 PRK06133 glutamate carboxypept 100.0 6E-52 1.3E-56 414.1 38.4 369 41-435 25-410 (410)
9 PRK07338 hypothetical protein; 100.0 2.4E-51 5.1E-56 409.9 38.9 363 41-433 5-399 (402)
10 PRK06837 acetylornithine deace 100.0 4.1E-51 8.9E-56 410.4 37.9 371 41-434 8-424 (427)
11 PRK13009 succinyl-diaminopimel 100.0 8.8E-51 1.9E-55 402.4 38.2 355 56-432 3-374 (375)
12 PRK08596 acetylornithine deace 100.0 1E-50 2.2E-55 406.9 36.9 371 44-436 4-420 (421)
13 PRK13983 diaminopimelate amino 100.0 1.3E-50 2.8E-55 404.7 35.9 360 55-430 5-399 (400)
14 TIGR01246 dapE_proteo succinyl 100.0 4.2E-50 9.2E-55 396.6 35.8 353 58-431 2-370 (370)
15 TIGR01880 Ac-peptdase-euk N-ac 100.0 8.6E-50 1.9E-54 398.2 36.7 363 55-432 9-398 (400)
16 TIGR03320 ygeY M20/DapE family 100.0 6.1E-50 1.3E-54 398.5 34.0 366 43-433 3-395 (395)
17 PRK13004 peptidase; Reviewed 100.0 8.9E-50 1.9E-54 397.6 34.6 370 42-434 4-398 (399)
18 TIGR03526 selenium_YgeY putati 100.0 8.5E-50 1.8E-54 397.3 33.9 365 44-433 4-395 (395)
19 TIGR01910 DapE-ArgE acetylorni 100.0 1.9E-50 4.1E-55 399.7 28.7 348 59-423 2-375 (375)
20 PRK05111 acetylornithine deace 100.0 4.9E-49 1.1E-53 390.9 37.3 349 55-433 5-382 (383)
21 PRK09133 hypothetical protein; 100.0 5.8E-49 1.3E-53 399.8 36.9 360 55-433 37-470 (472)
22 PRK07522 acetylornithine deace 100.0 4.7E-49 1E-53 391.4 34.6 350 55-432 4-384 (385)
23 PRK08651 succinyl-diaminopimel 100.0 7.4E-49 1.6E-53 391.1 35.5 354 55-433 6-392 (394)
24 PRK06446 hypothetical protein; 100.0 4.5E-49 9.7E-54 396.4 33.9 361 55-432 2-434 (436)
25 PRK08262 hypothetical protein; 100.0 3.3E-49 7.1E-54 403.0 33.3 366 55-433 44-485 (486)
26 TIGR01892 AcOrn-deacetyl acety 100.0 5.5E-49 1.2E-53 388.1 33.3 338 60-427 2-363 (364)
27 PRK08201 hypothetical protein; 100.0 1.5E-48 3.3E-53 395.3 35.6 371 42-432 3-454 (456)
28 PRK07473 carboxypeptidase; Pro 100.0 6.4E-48 1.4E-52 380.3 38.0 346 55-431 11-375 (376)
29 PRK08652 acetylornithine deace 100.0 3E-48 6.5E-53 380.4 34.9 338 55-433 2-346 (347)
30 PRK00466 acetyl-lysine deacety 100.0 1.3E-47 2.8E-52 375.1 35.3 332 55-434 10-345 (346)
31 PRK04443 acetyl-lysine deacety 100.0 1.6E-47 3.4E-52 374.6 34.9 335 54-431 5-348 (348)
32 PRK07907 hypothetical protein; 100.0 5.3E-47 1.1E-51 383.1 37.5 370 41-431 6-446 (449)
33 PRK09104 hypothetical protein; 100.0 5.9E-47 1.3E-51 384.2 37.4 375 41-432 5-462 (464)
34 PRK13007 succinyl-diaminopimel 100.0 8.5E-47 1.9E-51 370.7 35.0 333 55-428 7-351 (352)
35 TIGR01900 dapE-gram_pos succin 100.0 1.6E-46 3.4E-51 370.3 35.3 333 60-413 1-373 (373)
36 PRK07906 hypothetical protein; 100.0 5.8E-47 1.3E-51 380.8 32.1 358 58-430 2-425 (426)
37 PRK07079 hypothetical protein; 100.0 4.9E-46 1.1E-50 377.8 38.2 373 41-435 7-458 (469)
38 TIGR01883 PepT-like peptidase 100.0 2E-46 4.4E-51 369.2 33.7 340 57-428 2-360 (361)
39 PRK08737 acetylornithine deace 100.0 3.4E-46 7.3E-51 366.0 35.1 336 55-429 6-362 (364)
40 TIGR01886 dipeptidase dipeptid 100.0 2.5E-46 5.3E-51 378.4 32.4 361 44-433 4-466 (466)
41 PRK13381 peptidase T; Provisio 100.0 1.1E-45 2.3E-50 369.0 36.0 349 57-432 3-403 (404)
42 COG0624 ArgE Acetylornithine d 100.0 1.9E-45 4.2E-50 367.9 35.6 363 55-433 13-408 (409)
43 PRK12892 allantoate amidohydro 100.0 3.6E-45 7.7E-50 366.5 36.5 346 55-433 10-411 (412)
44 PRK05469 peptidase T; Provisio 100.0 3.4E-45 7.3E-50 365.8 35.2 353 55-434 2-407 (408)
45 PRK09290 allantoate amidohydro 100.0 1.3E-44 2.9E-49 361.9 37.5 345 55-434 7-412 (413)
46 PRK07318 dipeptidase PepV; Rev 100.0 2.2E-45 4.7E-50 372.6 31.4 361 44-433 5-466 (466)
47 PRK12893 allantoate amidohydro 100.0 4.7E-44 1E-48 358.3 38.7 347 55-434 10-411 (412)
48 TIGR01882 peptidase-T peptidas 100.0 1.2E-44 2.5E-49 361.4 33.4 351 55-432 3-407 (410)
49 PRK06156 hypothetical protein; 100.0 3.4E-44 7.4E-49 367.3 36.1 357 55-433 46-516 (520)
50 PRK12891 allantoate amidohydro 100.0 3.1E-43 6.7E-48 351.8 40.0 334 69-435 34-412 (414)
51 TIGR01902 dapE-lys-deAc N-acet 100.0 4.8E-44 1E-48 348.6 32.5 326 60-433 2-335 (336)
52 PRK07205 hypothetical protein; 100.0 8.7E-44 1.9E-48 359.1 33.7 349 55-434 11-444 (444)
53 PRK12890 allantoate amidohydro 100.0 2.2E-42 4.8E-47 346.2 39.8 343 55-432 9-411 (414)
54 KOG2275 Aminoacylase ACY1 and 100.0 4.5E-42 9.7E-47 321.8 31.5 363 55-432 25-418 (420)
55 TIGR01893 aa-his-dipept aminoa 100.0 2.4E-41 5.1E-46 343.8 35.2 346 55-431 4-476 (477)
56 TIGR01879 hydantase amidase, h 100.0 7.1E-41 1.5E-45 333.6 37.6 331 68-431 24-401 (401)
57 TIGR01887 dipeptidaselike dipe 100.0 2.2E-41 4.8E-46 339.7 31.4 348 55-428 2-447 (447)
58 PRK15026 aminoacyl-histidine d 100.0 1.1E-40 2.4E-45 336.2 35.5 343 55-431 10-482 (485)
59 TIGR03176 AllC allantoate amid 100.0 7.8E-40 1.7E-44 325.4 38.1 342 55-433 3-404 (406)
60 PRK08554 peptidase; Reviewed 100.0 1.9E-40 4.1E-45 332.4 31.3 357 56-433 2-438 (438)
61 PRK13799 unknown domain/N-carb 100.0 2.9E-39 6.3E-44 333.8 38.7 346 53-433 179-590 (591)
62 PRK13590 putative bifunctional 100.0 1.8E-38 3.8E-43 328.3 39.5 343 55-434 181-589 (591)
63 KOG2276 Metalloexopeptidases [ 100.0 1E-32 2.2E-37 256.1 29.3 377 41-432 4-471 (473)
64 COG2195 PepD Di- and tripeptid 99.9 4.9E-25 1.1E-29 213.9 19.9 349 55-431 5-411 (414)
65 PF01546 Peptidase_M20: Peptid 99.9 1.6E-21 3.4E-26 174.2 10.5 178 114-430 1-189 (189)
66 PF07687 M20_dimer: Peptidase 99.7 3E-17 6.4E-22 133.3 11.8 104 220-323 2-110 (111)
67 COG4187 RocB Arginine degradat 99.7 3.8E-16 8.3E-21 147.4 17.7 263 55-320 8-325 (553)
68 PRK10199 alkaline phosphatase 99.7 1.6E-15 3.4E-20 144.2 16.1 131 55-190 35-188 (346)
69 TIGR03106 trio_M42_hydro hydro 99.7 1.8E-14 4E-19 139.0 22.9 129 55-184 3-223 (343)
70 PRK09961 exoaminopeptidase; Pr 99.6 2.3E-14 5E-19 138.8 19.5 248 59-431 4-333 (344)
71 TIGR03107 glu_aminopep glutamy 99.5 1.8E-12 3.9E-17 125.2 22.1 243 59-431 2-341 (350)
72 COG1363 FrvX Cellulase M and r 99.5 2.8E-12 6.1E-17 122.3 22.4 143 55-203 2-235 (355)
73 PRK09864 putative peptidase; P 99.5 1.3E-11 2.9E-16 118.9 22.4 137 58-203 3-228 (356)
74 KOG2194 Aminopeptidases of the 98.4 2.3E-06 5E-11 89.2 10.7 134 55-203 57-224 (834)
75 PF04389 Peptidase_M28: Peptid 98.3 2.7E-06 6E-11 75.0 7.6 83 112-203 2-88 (179)
76 PF05343 Peptidase_M42: M42 gl 97.6 0.00031 6.6E-09 66.7 9.0 61 138-203 126-189 (292)
77 KOG3946 Glutaminyl cyclase [Po 97.6 0.0012 2.6E-08 60.2 11.6 124 55-190 51-200 (338)
78 KOG2526 Predicted aminopeptida 97.0 0.0075 1.6E-07 58.3 11.0 114 79-203 165-304 (555)
79 COG2234 Iap Predicted aminopep 96.8 0.0048 1.1E-07 62.4 8.6 49 142-192 225-275 (435)
80 KOG2195 Transferrin receptor a 96.7 0.0052 1.1E-07 64.6 7.9 77 98-190 338-420 (702)
81 PF05450 Nicastrin: Nicastrin; 94.8 0.2 4.3E-06 45.9 9.0 68 111-189 1-73 (234)
82 PRK00913 multifunctional amino 93.2 1.4 3.1E-05 44.7 12.4 121 55-179 171-309 (483)
83 PF00883 Peptidase_M17: Cytoso 93.1 0.5 1.1E-05 44.9 8.5 117 59-179 2-140 (311)
84 cd00433 Peptidase_M17 Cytosol 92.3 3 6.5E-05 42.4 13.4 123 55-179 154-295 (468)
85 PTZ00412 leucyl aminopeptidase 92.2 2.8 6E-05 42.9 12.7 120 55-179 212-354 (569)
86 PF05343 Peptidase_M42: M42 gl 92.0 0.1 2.2E-06 49.7 2.3 70 344-423 220-292 (292)
87 PRK05015 aminopeptidase B; Pro 91.9 3.9 8.4E-05 40.6 13.1 120 55-179 100-246 (424)
88 KOG2597 Predicted aminopeptida 91.3 2.4 5.2E-05 42.9 11.1 123 55-179 189-330 (513)
89 TIGR01893 aa-his-dipept aminoa 86.4 1.3 2.8E-05 45.4 5.8 46 269-320 335-380 (477)
90 PRK02256 putative aminopeptida 85.9 0.79 1.7E-05 46.4 3.7 76 345-429 380-460 (462)
91 COG0260 PepB Leucyl aminopepti 85.5 14 0.00031 37.6 12.3 117 55-179 167-308 (485)
92 PTZ00371 aspartyl aminopeptida 81.4 2.6 5.6E-05 42.9 5.3 80 345-433 373-457 (465)
93 PRK02813 putative aminopeptida 79.9 2.3 4.9E-05 42.8 4.3 76 345-429 346-426 (428)
94 COG4882 Predicted aminopeptida 72.3 14 0.0003 35.7 6.9 71 99-190 179-259 (486)
95 PF04114 Gaa1: Gaa1-like, GPI 56.8 45 0.00099 34.4 8.0 73 97-190 2-77 (504)
96 PRK06156 hypothetical protein; 45.7 1.6E+02 0.0034 30.6 10.0 25 273-297 240-264 (520)
97 PRK02256 putative aminopeptida 44.4 38 0.00083 34.5 5.1 41 137-181 251-293 (462)
98 PRK15026 aminoacyl-histidine d 41.1 61 0.0013 33.3 6.0 44 271-320 343-386 (485)
99 PF06675 DUF1177: Protein of u 35.5 1.1E+02 0.0024 28.1 6.0 86 109-204 30-130 (276)
100 PTZ00371 aspartyl aminopeptida 34.5 1.5E+02 0.0032 30.4 7.5 62 61-122 9-90 (465)
101 KOG3566 Glycosylphosphatidylin 32.9 3.2E+02 0.0069 28.6 9.3 89 80-190 93-193 (617)
102 PRK02813 putative aminopeptida 29.2 1.8E+02 0.004 29.3 7.1 55 69-123 16-89 (428)
103 PF03668 ATP_bind_2: P-loop AT 20.8 1.4E+02 0.0031 28.1 4.2 30 273-303 161-190 (284)
104 TIGR03406 FeS_long_SufT probab 20.6 4.3E+02 0.0094 22.9 6.9 29 291-319 114-142 (174)
105 PF09940 DUF2172: Domain of un 20.5 4E+02 0.0086 26.3 7.2 92 78-191 92-188 (386)
No 1
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=5.3e-59 Score=465.34 Aligned_cols=391 Identities=51% Similarity=0.881 Sum_probs=335.4
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecc
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMD 120 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D 120 (440)
..++........+.++++++.++|+++|++|++|.++++||.++|+++|++++...+++|++++++++++|+|+|.||+|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h~D 112 (437)
T PLN02693 33 QINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRADMD 112 (437)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEeecC
Confidence 45555444432223789999999999999999999999999999999999987655689999999645568999999999
Q ss_pred cCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEE
Q 013571 121 ALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMF 200 (440)
Q Consensus 121 ~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~ 200 (440)
|||+++..+|++....+|++||||||+++|++++|+++|++.+..++++|.|+|++|||++.|++.++++|.+++.++++
T Consensus 113 aVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~ii 192 (437)
T PLN02693 113 ALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIF 192 (437)
T ss_pred CCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEE
Confidence 99998877899998888999999999999999999999998876678999999999999767999999999887778889
Q ss_pred EeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEe
Q 013571 201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFID 280 (440)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~ 280 (440)
+.|..+..+.|.+..+.|..++|..+++|+++|+++|+|+|+.|+|||..+++++.+|+++..+..++....+++++.|+
T Consensus 193 g~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~ 272 (437)
T PLN02693 193 GIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN 272 (437)
T ss_pred EEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEE
Confidence 88887777788777787888899999999999999999999999999999999999999986555555567899999999
Q ss_pred cCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhh
Q 013571 281 AGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASM 360 (440)
Q Consensus 281 gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (440)
||.+.|+||++|++++++|+.|++ +.+.++|+++++..+..+++++++++......+++++.+++++++.++++++++
T Consensus 273 GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~ 350 (437)
T PLN02693 273 GGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDL 350 (437)
T ss_pred cCCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHh
Confidence 999999999999999999999974 589999999999988888888877763111235677778899999999999998
Q ss_pred cCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 361 VGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 361 ~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
+|.+.+.......|++|+++|.+.+|.+++++|+.+... .....|+++|+++.+.+..++++|+.++.+++..
T Consensus 351 ~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~~-~~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~ 423 (437)
T PLN02693 351 LGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDETN-GYASSHSPLYRINEDVLPYGAAIHATMAVQYLKE 423 (437)
T ss_pred cCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCCC-CCCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 887654322356799999999999999999999874321 1246899999999999999999999999999876
No 2
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=4e-59 Score=468.77 Aligned_cols=380 Identities=55% Similarity=0.931 Sum_probs=332.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCCcccc
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKS 134 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~~~ 134 (440)
+.+.++.+.++++|+++++|.++++||.++|+++|+++++...++|++++++++++|+|+|.||+||||+++..+|+++.
T Consensus 97 ~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~~~p 176 (478)
T PLN02280 97 AWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKS 176 (478)
T ss_pred HHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCCCCC
Confidence 67778888899999999999999999999999999998876678899999954444899999999999998878899998
Q ss_pred cCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEEEeccCCCCCCCccc
Q 013571 135 KNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVG 214 (440)
Q Consensus 135 ~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~ 214 (440)
+++|++||||+|+++|++++++++|++.+.+++++|.|+|++|||.+.|+++++++|.+++.|+++++|+.+..|.+.+.
T Consensus 177 ~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~ig 256 (478)
T PLN02280 177 KVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTAVIG 256 (478)
T ss_pred CCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCCCceeE
Confidence 88999999999999999999999999877778999999999999977799999999988888999999987667877776
Q ss_pred ccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEE
Q 013571 215 SRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRF 294 (440)
Q Consensus 215 ~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~ 294 (440)
.+.+...+|..+++|+++|+++|+|+|+.|+|||..+++++..|+++..+..++....+++++.|+||.+.|+||++|++
T Consensus 257 ~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~~~l 336 (478)
T PLN02280 257 SRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVVL 336 (478)
T ss_pred ecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCEEEE
Confidence 66677778999999999999999999999999999999999999988655555556679999999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcc
Q 013571 295 GGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMG 374 (440)
Q Consensus 295 ~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g 374 (440)
++|+|+.|+++.+++.++|+++++..+..+++++++++.......++++.+++++++.+++++.+.+|.+.........|
T Consensus 337 ~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~g 416 (478)
T PLN02280 337 GGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMG 416 (478)
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCee
Confidence 99999999999999999999999998888888877765211123578888899999999999988777653322235678
Q ss_pred cccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 375 AEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 375 ~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
++|+++|.+.+|++++++|+++..+|+...+|+++|+++++++..++++|+.++.+++..
T Consensus 417 ~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~~ 476 (478)
T PLN02280 417 AEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLIE 476 (478)
T ss_pred echHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 999999998899998888876543355567999999999999999999999999998753
No 3
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.5e-54 Score=427.85 Aligned_cols=359 Identities=21% Similarity=0.243 Sum_probs=298.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceee---cCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCC-
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTW---PVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW- 130 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~---~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~- 130 (440)
+++++++++|+++||+|++|.++++||.++|+++|++++. .++++|+++++++++ |+|+|+||+||||+++...|
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~~-~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSGS-PVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCCC-ceEEEEeeecccCCCCcccCc
Confidence 6788999999999999999999999999999999999765 246789999995444 89999999999998765556
Q ss_pred --ccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEEEEec
Q 013571 131 --EHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIH 203 (440)
Q Consensus 131 --~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~ 203 (440)
||. ..++|++|||| ||++++++|.|+++|.+.+..++++|.|+|++|||. +.|+..+++++.+.++|++++.+
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 676 46789999999 589999999999999998877899999999999995 46999999998777789888766
Q ss_pred cCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc---CCCCCCeEEEEEEEe
Q 013571 204 ISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE---TDPLEARVVTVGFID 280 (440)
Q Consensus 204 ~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~---~~~~~~~t~~~~~i~ 280 (440)
+.. ..+ ...++|..+++|+++|+++|+|.|+.|.|||..+++++.+++++..+. .+..+.++++++.|+
T Consensus 161 p~~----~~i----~~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 PSG----HGI----VYAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred CCC----cee----EEEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 421 111 123579999999999999999999999999999999999998875322 122456899999999
Q ss_pred cCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCc--CCCHHHHHHHHHHHH
Q 013571 281 AGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPAT--VNDEKMYEHGKRVGA 358 (440)
Q Consensus 281 gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 358 (440)
||...|+||++|++++|+|+.|+++.+++.++|++++++.+...+.++++++. ..+++. +.++++++.++++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~l~~~~~~~~~ 308 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIY----SNHRPVASDKDSKLVQLAKDVAK 308 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEe----cCCCCcCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877666667777763 333333 446899999999999
Q ss_pred hhcCCCCcccCCCCcccccHHHHHHHhccc-eEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 359 SMVGEPNVHLTPVEMGAEDFSFYTQRMPAA-HFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 359 ~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v-~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
+++|.++. ....+|+||+++|....|.+ .+.+||+.. ..+|++||+|+++++.+++++|..++.++|+
T Consensus 309 ~~~g~~~~--~~~~~g~tD~~~~~~~~~~ip~i~~Gpg~~-----~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 377 (377)
T PRK08588 309 SYVGQDIP--LSAIPGATDASSFLKKKPDFPVIIFGPGNN-----LTAHQVDEYVEKDMYLKFIDIYKEIIIQYLK 377 (377)
T ss_pred HhhCCCCc--eecCCCcccHHHHhhhcCCCCEEEECCCCC-----ccCCCCCceeEHHHHHHHHHHHHHHHHHHhC
Confidence 98887542 34678999999998643332 334787632 3499999999999999999999999998874
No 4
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=7.6e-53 Score=407.74 Aligned_cols=375 Identities=45% Similarity=0.700 Sum_probs=342.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecC-CCceEEEEEcCC-CCCEEEEEEecccCCCCCCCCCcc
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV-AKTGIVASVGSG-GEPWFGLRAEMDALPLQEMVEWEH 132 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nv~~~~~~~-~~~~i~~~~H~D~vp~~~~~~~~~ 132 (440)
++++++.|+|+++|+.+++|.++++||+++|+++|+++.... .++.+++.++++ ++|+|.|.+.||.+|..+.+++||
T Consensus 12 ~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALPi~E~t~~~~ 91 (392)
T COG1473 12 DELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALPIQEETGLPF 91 (392)
T ss_pred HHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCccccccCCCc
Confidence 899999999999999999999999999999999999954444 479999999865 567999999999999999999999
Q ss_pred cccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCC-CCEEEEeccCCCCCCC
Q 013571 133 KSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDK-FQGMFGIHISPVLPTG 211 (440)
Q Consensus 133 ~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~-~d~~~~~~~~~~~~~g 211 (440)
++..+|++|+||+|++.+++|+++++|++...+++++|.|+|++.||++.|+..|+++|.+++ +|+++.+|+.|+.|.|
T Consensus 92 ~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p~~~~g 171 (392)
T COG1473 92 ASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGPGLPVG 171 (392)
T ss_pred ccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCCCCCCc
Confidence 999999999999999999999999999987557999999999999998779999999999999 9999999998877889
Q ss_pred cccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccc
Q 013571 212 TVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEI 291 (440)
Q Consensus 212 ~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~ 291 (440)
.+..+.|....+...++++++|+++|++.|+.++||+..++.++..|+.+..+..+|....+++++.++||.+.|+||++
T Consensus 172 ~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~NVIpd~ 251 (392)
T COG1473 172 TVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAANVIPDS 251 (392)
T ss_pred eEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCCcCCCe
Confidence 99999998778899999999999999999999999999999999999999999988888899999999999999999999
Q ss_pred eEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCc--ccC
Q 013571 292 VRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNV--HLT 369 (440)
Q Consensus 292 a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~ 369 (440)
+++...+|....+..+.+.++++++++..+..+|+++++++ ...+|++.+|..+.+.+++++++..|...+ ...
T Consensus 252 A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~----~~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (392)
T COG1473 252 AELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDY----ERGYPPVVNDPALTDLLAEAAEEVGGEEVVVVELP 327 (392)
T ss_pred eEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe----cCCCCCccCCHHHHHHHHHHHHHhccccceecccC
Confidence 99999999999999999999999999999999999999999 789999999999999999999999764332 122
Q ss_pred CCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 370 PVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 370 ~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
....||+|+++|.+.+|.+++++|..... +.....|.+...++.+.+..+++++..++..++..
T Consensus 328 ~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~-~~~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~~ 391 (392)
T COG1473 328 PSMAGSEDFGYYLEKVPGAFFFLGTGSAD-GGTYPLHHPKFDFDEAALATGVKLLAALALLYLAK 391 (392)
T ss_pred CCCCccchHHHHHHhCCeeEEEeecCcCC-CCcccccCCcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 23459999999999999999999977643 22345899999999999999999999999888753
No 5
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=7.6e-54 Score=430.33 Aligned_cols=373 Identities=19% Similarity=0.218 Sum_probs=305.0
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec--------------------CCCce
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP--------------------VAKTG 100 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~~~n 100 (440)
..++.++++.++ +++++++++|++|||+|++|.++++||+++|+++|++++.. ..++|
T Consensus 5 ~~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 82 (422)
T PRK06915 5 KKQICDYIESHE--EEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPN 82 (422)
T ss_pred HHHHHHHHHhhH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCce
Confidence 567788888876 89999999999999999999999999999999999987531 24689
Q ss_pred EEEEEcCC-CCCEEEEEEecccCCCCCCCCC---cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEE
Q 013571 101 IVASVGSG-GEPWFGLRAEMDALPLQEMVEW---EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKL 172 (440)
Q Consensus 101 v~~~~~~~-~~~~i~~~~H~D~vp~~~~~~~---~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~ 172 (440)
+++++++. ++|+|+|+|||||||+++...| ||.. +++|++|||| |||+++++|.|+++|++.+.+++++|.|
T Consensus 83 lia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~ 162 (422)
T PRK06915 83 IVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIF 162 (422)
T ss_pred EEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 99999764 4589999999999999876666 6764 5689999999 5899999999999999888778899999
Q ss_pred EEeccCCc-ccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHH
Q 013571 173 VFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAA 251 (440)
Q Consensus 173 ~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~ 251 (440)
+|++|||. +.|+..++.++. ..|++++.++ ++. .....++|..+++|+++|+++|+|.|+.|.||+..+
T Consensus 163 ~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~ep-----~~~---~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~ 232 (422)
T PRK06915 163 QSVIEEESGGAGTLAAILRGY--KADGAIIPEP-----TNM---KFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKS 232 (422)
T ss_pred EEecccccCCcchHHHHhcCc--CCCEEEECCC-----CCc---cceeecccEEEEEEEEEeeccccCCCCcCcCHHHHH
Confidence 99999994 468888888764 5788887543 332 122456899999999999999999999999999999
Q ss_pred HHHHHHHHHhhcc----cCCCC-----CCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHH
Q 013571 252 SFAILTLQHIVSR----ETDPL-----EARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAA 322 (440)
Q Consensus 252 ~~~i~~l~~~~~~----~~~~~-----~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~ 322 (440)
++++..|+++..+ ...+. .+.|+|++.|+||...|+||++|++.+|+|+.|+++.+++.++|++.+++.+.
T Consensus 233 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~~ 312 (422)
T PRK06915 233 MFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELND 312 (422)
T ss_pred HHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 9999999887532 11111 24589999999999999999999999999999999999999999999988764
Q ss_pred Hc----CCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH--hccceEEEccCC
Q 013571 323 VH----QCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR--MPAAHFYVGTRN 396 (440)
Q Consensus 323 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~v~~~~G~~~ 396 (440)
.. +..+++++.+. .....+++.++++++.+++++++++|.++.. ...+|++|+++|.+. +|+++ +||+.
T Consensus 313 ~~~~~~~~~~~v~~~~~-~~~~~~~~~d~~lv~~l~~a~~~~~G~~~~~--~~~~g~tD~~~~~~~~giP~v~--fGpg~ 387 (422)
T PRK06915 313 VDEWFVEHPVEVEWFGA-RWVPGELEENHPLMTTLEHNFVEIEGNKPII--EASPWGTDGGLLTQIAGVPTIV--FGPGE 387 (422)
T ss_pred cChhhhcCCceEEeecc-cCCcccCCCCCHHHHHHHHHHHHHhCCCCee--ceeeeeccHHHHhccCCCCEEE--ECCCC
Confidence 31 22345544211 0112245668899999999999988886542 467789999999986 89865 66643
Q ss_pred CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhccc
Q 013571 397 ETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNL 435 (440)
Q Consensus 397 ~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~ 435 (440)
. ..+|++||+++++++.+++++|++++.++|...
T Consensus 388 ~-----~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~~~~ 421 (422)
T PRK06915 388 T-----KVAHYPNEYIEVDKMIAAAKIIALTLLDWCEVK 421 (422)
T ss_pred c-----cccCCCCceeEHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 358999999999999999999999999998754
No 6
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=6.7e-53 Score=415.11 Aligned_cols=356 Identities=46% Similarity=0.742 Sum_probs=302.1
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceee-cCCCceEEEEEcCC-CCCEEEEEEecccCCCCCCCCCccccc
Q 013571 58 RRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTW-PVAKTGIVASVGSG-GEPWFGLRAEMDALPLQEMVEWEHKSK 135 (440)
Q Consensus 58 ~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~-~~~~~nv~~~~~~~-~~~~i~~~~H~D~vp~~~~~~~~~~~~ 135 (440)
++++++|++|||+|++|.++++||.++|+++|+++++ .....|++++++++ ++|+|+|+||+||||++++..+||...
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 5789999999999999999999999999999999876 45678899999764 568999999999999887777889866
Q ss_pred CCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccc
Q 013571 136 NNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGS 215 (440)
Q Consensus 136 ~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~ 215 (440)
++|++||||+|++++++++++..|++.+..++++|.|+|++|||.+.|+..+++++.+++.|++++++++++.+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999988766788999999999999778999999988777789999999876666666555
Q ss_pred cCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEE
Q 013571 216 RPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFG 295 (440)
Q Consensus 216 ~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~ 295 (440)
..+..++|+.+++|+++|+++|++.|+.|.||+..+++++.+++++..+........+++++.|+||.+.|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 56777889999999999999999999999999999999999998864333233345789999999999999999999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcc-cCCCCcc
Q 013571 296 GTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVH-LTPVEMG 374 (440)
Q Consensus 296 ~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~g 374 (440)
+|+|+.|.++.+++.++|++++++.+.+.+.+++++. ...+|+...++++++.+++++++++|..+.. .+..++|
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~----~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~g 317 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNY----DRGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMG 317 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE----ecCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCcc
Confidence 9999999999999999999999998877788888877 3345555668899999999999987854321 1246789
Q ss_pred cccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCch
Q 013571 375 AEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDAL 417 (440)
Q Consensus 375 ~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l 417 (440)
++|++++++.+|++++|+|....+.++....|++++..+.+-+
T Consensus 318 g~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 318 SEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred ccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 9999999988999998998774321223568999988876544
No 7
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=5.4e-52 Score=417.83 Aligned_cols=372 Identities=14% Similarity=0.103 Sum_probs=297.1
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHhCCCCC--c-chHHHHHHHHHHHHhCCCceeecC-----------CCceEEEEEcC
Q 013571 42 RELLDSAREPEFFEWMRRIRRRIHENPELG--F-EEYETSQLVRSELDSLGIEYTWPV-----------AKTGIVASVGS 107 (440)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s--~-~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nv~~~~~~ 107 (440)
+++.++++.++ +++++++++|++|||++ + +|.++++||.++|+++||+++... .++|+++++++
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g 80 (427)
T PRK13013 3 DRLFAAIEARR--DDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQG 80 (427)
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecC
Confidence 45666777766 89999999999999986 3 467999999999999999986531 15699999965
Q ss_pred C-CCCEEEEEEecccCCCCC-CCCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc
Q 013571 108 G-GEPWFGLRAEMDALPLQE-MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY 181 (440)
Q Consensus 108 ~-~~~~i~~~~H~D~vp~~~-~~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~ 181 (440)
+ ++|+|+|+||+||||+++ |..+||.. ++||+||||| |||+++++|+|+++|++.+..++++|.|+|++|||.+
T Consensus 81 ~~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 160 (427)
T PRK13013 81 ARDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESG 160 (427)
T ss_pred CCCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccC
Confidence 4 458999999999999864 44567874 6789999999 6999999999999999888778899999999999954
Q ss_pred --cchHHHHHcCCCC--CCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHH
Q 013571 182 --GGAYYMIKEGAVD--KFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILT 257 (440)
Q Consensus 182 --~G~~~l~~~~~~~--~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~ 257 (440)
+|...+++++.+. ..|++++.++. +... ....++|..+++|+++|+++|+|.|+.|.|||..+++++.+
T Consensus 161 ~~~g~~~l~~~~~~~~~~~d~~i~~ep~-----~~~~--i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~ 233 (427)
T PRK13013 161 GFGGVAYLAEQGRFSPDRVQHVIIPEPL-----NKDR--ICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAE 233 (427)
T ss_pred ChhHHHHHHhcCCccccCCCEEEEecCC-----CCCc--eEEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHH
Confidence 3778888887665 56888876632 2111 12346899999999999999999999999999999999999
Q ss_pred HHHhhccc-----C------CCCCCeEEEEEEEecCCcc----------cccccceEEEEEEecCChhhHHHHHHHHHHH
Q 013571 258 LQHIVSRE-----T------DPLEARVVTVGFIDAGQAG----------NIIPEIVRFGGTFRSLTTEGLLYLEQRIKEV 316 (440)
Q Consensus 258 l~~~~~~~-----~------~~~~~~t~~~~~i~gG~~~----------n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~ 316 (440)
|++...+. . +....+++|++.|+||... |+||++|++++|+|+.|+++.+++.++|+++
T Consensus 234 l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~ 313 (427)
T PRK13013 234 IEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITAL 313 (427)
T ss_pred HHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 97653110 0 0113578999999999776 9999999999999999999999999999999
Q ss_pred HHHHHHHc-CCeEEEEEeccccCCCCC--cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH--hccceEE
Q 013571 317 IEMQAAVH-QCSATIDFLEEKMRHYPA--TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR--MPAAHFY 391 (440)
Q Consensus 317 i~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~v~~~ 391 (440)
+++.+... +.+++++. ...+++ .+.++++++.+.+++++.+|.++. ...+++++|++++.+. +|.+ ..
T Consensus 314 i~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~lv~~l~~a~~~~~g~~~~--~~~~~g~~D~~~~~~~g~~~~~-v~ 386 (427)
T PRK13013 314 LERLKRARPGFAYEIRD----LFEVLPTMTDRDAPVVRSVAAAIERVLGRQAD--YVVSPGTYDQKHIDRIGKLKNC-IA 386 (427)
T ss_pred HHHHHhhCCCceeEEEE----cccCCcccCCCCCHHHHHHHHHHHHhhCCCCc--eeecCccCCHHHHHhcCCCCCE-EE
Confidence 98876533 45566554 223333 344679999999999998787553 2356888999999886 3323 24
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 392 VGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 392 ~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
+||+.. ..+|++||||++++|.+++++|+.++.+++.-
T Consensus 387 fGPg~~-----~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~~ 424 (427)
T PRK13013 387 YGPGIL-----DLAHQPDEWVGIADMVDSAKVMALVLADLLAG 424 (427)
T ss_pred ECCCCc-----cccCCCCceeEHHHHHHHHHHHHHHHHHHhcc
Confidence 777542 35899999999999999999999999999864
No 8
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=6e-52 Score=414.10 Aligned_cols=369 Identities=19% Similarity=0.218 Sum_probs=300.1
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcchH---HHHHHHHHHHHhCCCceeec----CCCceEEEEEcCCCCCEE
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEEY---ETSQLVRSELDSLGIEYTWP----VAKTGIVASVGSGGEPWF 113 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~---~~~~~l~~~l~~~G~~~~~~----~~~~nv~~~~~~~~~~~i 113 (440)
.+++.++++.+. +++++++++|++|||+++++. ++++||.++|+++|++++.. ..++|++++++++++|+|
T Consensus 25 ~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~i 102 (410)
T PRK06133 25 DAELLAAAQQEQ--PAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRI 102 (410)
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceE
Confidence 566788888877 999999999999999997653 79999999999999998763 246799999976555899
Q ss_pred EEEEecccCCCCC-CCCCcccccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHH
Q 013571 114 GLRAEMDALPLQE-MVEWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMI 188 (440)
Q Consensus 114 ~~~~H~D~vp~~~-~~~~~~~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~ 188 (440)
+|+||+||||.+. |...||. .++|++|||| +|++++++|++++.|++.+..+.++|.|+|++|||. +.|++.++
T Consensus 103 ll~~H~D~Vp~~~~w~~~Pf~-~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~ 181 (410)
T PRK06133 103 MLIAHMDTVYLPGMLAKQPFR-IDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELI 181 (410)
T ss_pred EEEeecCccCCCCccCCCCEE-EECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHH
Confidence 9999999999854 4445676 5789999999 589999999999999988877889999999999995 46999998
Q ss_pred HcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCC
Q 013571 189 KEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETD 267 (440)
Q Consensus 189 ~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 267 (440)
++.. .+.|++++.++. .+.+.+. ..++|..+++|+++|+++|++ .|+.|.||+..+++++..|+++..
T Consensus 182 ~~~~-~~~d~~i~~ep~--~~~~~v~----~~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~---- 250 (410)
T PRK06133 182 AELA-AQHDVVFSCEPG--RAKDALT----LATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD---- 250 (410)
T ss_pred HHHh-ccCCEEEEeCCC--CCCCCEE----EeccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC----
Confidence 7643 367999988743 2223332 234799999999999999985 899999999999999999987642
Q ss_pred CCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcC---
Q 013571 268 PLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATV--- 344 (440)
Q Consensus 268 ~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 344 (440)
+....+++++.|+||.+.|+||++|++.+|+|+.|.++.+++.+++++++++ ....+.+++++. ...+|++.
T Consensus 251 ~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 325 (410)
T PRK06133 251 PAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRF----ERGRPPLEANA 325 (410)
T ss_pred CCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEe----ccccCCcccCc
Confidence 2234689999999999999999999999999999999999999999999986 333466677665 33455543
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAAL 423 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~ 423 (440)
.++++++.+++++++. |.++...+...+++||++++... +|++++++|+.+. .+|++||+|+++++.+++++
T Consensus 326 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~~------~aH~~nE~i~i~~~~~~~~~ 398 (410)
T PRK06133 326 ASRALAEHAQGIYGEL-GRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVGF------GAHSNDEYIELNSIVPRLYL 398 (410)
T ss_pred chHHHHHHHHHHHHHc-CCCccccccCCCCCchHHHHHhcCCCceEecccCCCC------CCCCCCcEEEcccHHHHHHH
Confidence 2457888888888775 65432112467899999999987 8888767777543 39999999999999999999
Q ss_pred HHHHHHHHhccc
Q 013571 424 HAAVAISYLDNL 435 (440)
Q Consensus 424 ~~~~~~~~~~~~ 435 (440)
|.+++.+++.++
T Consensus 399 ~~~~~~~~~~~~ 410 (410)
T PRK06133 399 LTRMIMELSRDK 410 (410)
T ss_pred HHHHHHHhhcCC
Confidence 999999998753
No 9
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-51 Score=409.87 Aligned_cols=363 Identities=20% Similarity=0.207 Sum_probs=294.9
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhCCCceeecC-----------------CCce
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEE---YETSQLVRSELDSLGIEYTWPV-----------------AKTG 100 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----------------~~~n 100 (440)
..++.++++++. +++++.+++|+++||+++++ .++++||.++|+++|++++... .++|
T Consensus 5 ~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~n 82 (402)
T PRK07338 5 ERAVLDLIDDRQ--APMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPA 82 (402)
T ss_pred HHHHHHHHhhhH--HHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCe
Confidence 455677778776 99999999999999999764 5789999999999999876421 1268
Q ss_pred EEEEEcCCCCCEEEEEEecccCCCCCCCCCcccc---cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEE
Q 013571 101 IVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKS---KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVF 174 (440)
Q Consensus 101 v~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~~~---~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~ 174 (440)
++++++++.+++|+|+|||||||++. .||.. +++|++|||| |||+++++|+|+++|++.+..+++++.|+|
T Consensus 83 l~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~ 159 (402)
T PRK07338 83 LHVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLI 159 (402)
T ss_pred EEEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 99999654436899999999999853 68874 5789999999 699999999999999988777889999999
Q ss_pred eccCCc-ccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCC-CCCCCCHHHHHH
Q 013571 175 QPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM-PQDTRDPVLAAS 252 (440)
Q Consensus 175 ~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~-p~~g~nAi~~~~ 252 (440)
++|||. +.|++.+++++. .+.+++++.++. .+.+.+. ..++|..+++|+++|+++|+|. |+.|.||+..++
T Consensus 160 ~~dEE~g~~g~~~~~~~~~-~~~~~~i~~ep~--~~~~~v~----~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~ 232 (402)
T PRK07338 160 NPDEEIGSPASAPLLAELA-RGKHAALTYEPA--LPDGTLA----GARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAA 232 (402)
T ss_pred ECCcccCChhhHHHHHHHh-ccCcEEEEecCC--CCCCcEE----eecceeEEEEEEEEeEcccCCCCcccCccHHHHHH
Confidence 999995 458888888754 356788887752 2334332 2347999999999999999995 889999999999
Q ss_pred HHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEE
Q 013571 253 FAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDF 332 (440)
Q Consensus 253 ~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~ 332 (440)
+++.+|+++... ....++|++.|+||.+.|+||++|++++|+|+.|+++.+++.++|++++++.+..++++++++.
T Consensus 233 ~~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~ 308 (402)
T PRK07338 233 ELALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHG 308 (402)
T ss_pred HHHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEEc
Confidence 999999887432 2346899999999999999999999999999999999999999999999887655666666643
Q ss_pred eccccCCCCCc---CCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCC
Q 013571 333 LEEKMRHYPAT---VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSP 408 (440)
Q Consensus 333 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~ 408 (440)
...+|+. +.++++++.++++.++. |.++. ...++|+||++++... +|++. ++||+.. .+|++
T Consensus 309 ----~~~~~p~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~-~~Gpg~~------~~H~~ 374 (402)
T PRK07338 309 ----GFGRPPKPIDAAQQRLFEAVQACGAAL-GLTID--WKDSGGVCDGNNLAAAGLPVVD-TLGVRGG------NIHSE 374 (402)
T ss_pred ----cccCCCCCCCcchHHHHHHHHHHHHHc-CCCcc--cccCCccchHHHHhhcCCCeEe-ccCCCCC------CCCCc
Confidence 2233333 23457999999988775 87543 2467899999999877 89874 5777643 38999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 409 YLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 409 dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
||||+++++.+++++|+.++.+++.
T Consensus 375 ~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 375 DEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred cceEehhhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998854
No 10
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.1e-51 Score=410.41 Aligned_cols=371 Identities=15% Similarity=0.091 Sum_probs=299.1
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec--------------------CCCce
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP--------------------VAKTG 100 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~~~n 100 (440)
.+++.++++... +++++++++|++|||+|++|.++++||.++|+++|+++++. ++++|
T Consensus 8 ~~~~~~~i~~~~--~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 85 (427)
T PRK06837 8 TQRILAAVDAGF--DAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAPN 85 (427)
T ss_pred HHHHHHHHHhhh--HHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCce
Confidence 566777888877 99999999999999999999999999999999999987541 25789
Q ss_pred EEEEEcCC--CCCEEEEEEecccCCCCC---CCCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEE
Q 013571 101 IVASVGSG--GEPWFGLRAEMDALPLQE---MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVK 171 (440)
Q Consensus 101 v~~~~~~~--~~~~i~~~~H~D~vp~~~---~~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~ 171 (440)
|+++++++ .+|+|+|+|||||||+++ |...||.. .++|++|||| +||+++++|.|+++|++.+..++++|.
T Consensus 86 l~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~ 165 (427)
T PRK06837 86 VVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARVH 165 (427)
T ss_pred EEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEE
Confidence 99999753 358999999999999975 44457764 5789999999 589999999999999998877899999
Q ss_pred EEEeccCC-cccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHH
Q 013571 172 LVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLA 250 (440)
Q Consensus 172 ~~~~~dEE-~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~ 250 (440)
|+|++||| ++.|+..++.+++ ..|++++.++ ++.. ....++|..+++|+++|+++|+|.|+.|.||+..
T Consensus 166 ~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~ep-----~~~~---i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~ 235 (427)
T PRK06837 166 FQSVIEEESTGNGALSTLQRGY--RADACLIPEP-----TGEK---LVRAQVGVIWFRLRVRGAPVHVREAGTGANAIDA 235 (427)
T ss_pred EEEEeccccCCHhHHHHHhcCc--CCCEEEEcCC-----CCCc---cccccceeEEEEEEEEeeccccCCcccCcCHHHH
Confidence 99999999 4568888877765 4788887653 2211 1224589999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccc---------C-CCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 013571 251 ASFAILTLQHIVSRE---------T-DPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQ 320 (440)
Q Consensus 251 ~~~~i~~l~~~~~~~---------~-~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~ 320 (440)
+++++.+|+++.... . ......++|++.|+||...|+||++|++.+++|+.|+++.+++.++|++.+++.
T Consensus 236 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~~ 315 (427)
T PRK06837 236 AYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAAA 315 (427)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHHH
Confidence 999999998764211 0 012345899999999999999999999999999999999999999999999876
Q ss_pred HHHc----CCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHH-H-hccceEEEcc
Q 013571 321 AAVH----QCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ-R-MPAAHFYVGT 394 (440)
Q Consensus 321 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-~p~v~~~~G~ 394 (440)
+... +..+++++......+ -.++.++++++.+.+++++.+|.++. +...+|+||++++.. . +|++. +||
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~a~~~~~g~~~~--~~~~~g~tDa~~~~~~~gip~v~--~Gp 390 (427)
T PRK06837 316 ARDDRFLSNNPPEVVWSGFLAEG-YVLEPGSEAEAALARAHAAVFGGPLR--SFVTTAYTDTRFYGLYYGIPALC--YGP 390 (427)
T ss_pred HhcChhhhhCCCeEEEEecccCC-cCCCCCCHHHHHHHHHHHHHhCCCCe--eeEEeeccchHHHhccCCCCEEE--ECC
Confidence 5432 222344431100112 23456789999999999998887543 346789999999985 4 88765 777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 395 RNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 395 ~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
+.. .+|++||+|+++++.+++++|+.++.++|.-
T Consensus 391 ~~~------~~H~~nE~i~i~~l~~~~~~~~~~l~~~~~~ 424 (427)
T PRK06837 391 SGE------GIHGFDERVDLESVRKVTKTIALFVAEWCGV 424 (427)
T ss_pred CCC------ccCCCCceEEHHHHHHHHHHHHHHHHHHhCC
Confidence 643 3999999999999999999999999999853
No 11
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=8.8e-51 Score=402.36 Aligned_cols=355 Identities=18% Similarity=0.194 Sum_probs=286.6
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceee--cCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCC---
Q 013571 56 WMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTW--PVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW--- 130 (440)
Q Consensus 56 ~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~--~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~--- 130 (440)
++++++++|++|||++++|.++++|+.++|+++||+++. .++.+|++++++ +++|+|+|++|+||||+++...|
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g-~~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRG-TEGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEec-CCCCEEEEEeecccCCCCCcccCCCC
Confidence 578899999999999999999999999999999999875 245679999984 34599999999999999765556
Q ss_pred cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcCC--CCCCCEEEEe
Q 013571 131 EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGA--VDKFQGMFGI 202 (440)
Q Consensus 131 ~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~~--~~~~d~~~~~ 202 (440)
||.. ++||++|||| +|++++++|.+++.|++.+..++++|.|+|++|||++ .|++.+++... ...+|++++.
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 6764 5689999999 5899999999999999887778899999999999954 48988875321 1247888887
Q ss_pred ccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-CCCCCeEEEEEEEec
Q 013571 203 HISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET-DPLEARVVTVGFIDA 281 (440)
Q Consensus 203 ~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~-~~~~~~t~~~~~i~g 281 (440)
++......+. .....++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+..+.. ......+++++.|+|
T Consensus 162 ep~~~~~~~~---~i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGD---VIKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCC---eEEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 7543222221 112345799999999999999999999999999999999999987642221 123456899999999
Q ss_pred CC-cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcC-CCHHHHHHHHHHHHh
Q 013571 282 GQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATV-NDEKMYEHGKRVGAS 359 (440)
Q Consensus 282 G~-~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 359 (440)
|. ..|+||++|++++|+|++|.++.+++.++|++.+++ .+.++++++. ..+++.. +++++++.+.+++++
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~~----~~~~p~~~~~~~~~~~l~~a~~~ 310 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEWT----LSGEPFLTPPGKLVDAVVAAIEA 310 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEEe----cCCCcccCCCcHHHHHHHHHHHH
Confidence 86 789999999999999999999999999999999873 3667777652 2333332 248899999999999
Q ss_pred hcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 360 MVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 360 ~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
.+|.++. +...+|+||++++.+. +|++. +||+.. .+|++||+|+++++.+++++|..++.+|+
T Consensus 311 ~~g~~~~--~~~~~g~tda~~~~~~g~p~v~--~Gp~~~------~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 311 VTGITPE--LSTSGGTSDARFIADYGAQVVE--FGPVNA------TIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred HhCCCce--eeccCCCccHHHHHHcCCCeEE--eccCcc------cCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 8888653 2466788999999886 77654 777643 39999999999999999999999999886
No 12
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=1e-50 Score=406.88 Aligned_cols=371 Identities=15% Similarity=0.101 Sum_probs=293.6
Q ss_pred HHHhcCCcchHHHHHHHHHHHHhCCCCC---cchHHHHHHHHHHHHhCCCceeec---CCCceEEEEEcCC-C--CCEEE
Q 013571 44 LLDSAREPEFFEWMRRIRRRIHENPELG---FEEYETSQLVRSELDSLGIEYTWP---VAKTGIVASVGSG-G--EPWFG 114 (440)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~~ps~s---~~e~~~~~~l~~~l~~~G~~~~~~---~~~~nv~~~~~~~-~--~~~i~ 114 (440)
+.++++.+. +++++++++|++|||++ ++|.++++||.++|+++||+++.. ++++|++++++++ + +|+|+
T Consensus 4 ~~~~i~~~~--~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~ll 81 (421)
T PRK08596 4 LLEQIELRK--DELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLI 81 (421)
T ss_pred HHHHHHhhH--HHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEE
Confidence 455666655 88999999999999998 467889999999999999988752 4678999999653 2 26799
Q ss_pred EEEecccCCCCCCCCC---cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHH
Q 013571 115 LRAEMDALPLQEMVEW---EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYY 186 (440)
Q Consensus 115 ~~~H~D~vp~~~~~~~---~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~ 186 (440)
|+||+||||+++...| ||.. +++|++|||| ||++++++|+|+++|++.+..++++|.|+|++|||. +.|+.+
T Consensus 82 l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~ 161 (421)
T PRK08596 82 INGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTLQ 161 (421)
T ss_pred EeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHHH
Confidence 9999999999765556 5663 5789999999 489999999999999998878899999999999995 469999
Q ss_pred HHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEec----------CCCCCCCCCCCCHHHHHHHHHH
Q 013571 187 MIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGK----------GGHAAMPQDTRDPVLAASFAIL 256 (440)
Q Consensus 187 l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~----------~~Hss~p~~g~nAi~~~~~~i~ 256 (440)
+++++. ..|++++.++.. .. ...++|..++.++++|+ .+|++.|+.|.|||..+++++.
T Consensus 162 ~~~~~~--~~d~~i~~ep~~-----~~----~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~ 230 (421)
T PRK08596 162 CCERGY--DADFAVVVDTSD-----LH----MQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQ 230 (421)
T ss_pred HHhcCC--CCCEEEECCCCC-----Cc----cccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHH
Confidence 998864 468888877432 11 12346777777778775 3799999999999999999999
Q ss_pred HHHHhhcc-----cC--CCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHH------
Q 013571 257 TLQHIVSR-----ET--DPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAV------ 323 (440)
Q Consensus 257 ~l~~~~~~-----~~--~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~------ 323 (440)
+|+++... .. .....+++|++.|+||...|+||++|++++|+|+.|+++.+++.++|++++++.+..
T Consensus 231 ~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~ 310 (421)
T PRK08596 231 SLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLRE 310 (421)
T ss_pred HHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhhh
Confidence 99876311 11 112457899999999999999999999999999999999999999999999875431
Q ss_pred cCCeEEEE---EeccccCCCCC--cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCC
Q 013571 324 HQCSATID---FLEEKMRHYPA--TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNE 397 (440)
Q Consensus 324 ~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~ 397 (440)
....+++. ........+|+ ++.++++++++.+++++++|.++. +....++||++++... +|++. +||+.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~- 385 (421)
T PRK08596 311 NPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNAI--LDMSTTVTDGGWFAEFGIPAVI--YGPGT- 385 (421)
T ss_pred CCceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCCe--eeEEeeecchhhhhhcCCCEEE--ECCCc-
Confidence 11122211 00000112333 456799999999999999887552 3456789999999887 89875 56543
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcccc
Q 013571 398 TLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLE 436 (440)
Q Consensus 398 ~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~~ 436 (440)
...+|++||++++++|.+++++|.+++.++|..++
T Consensus 386 ----~~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~~ 420 (421)
T PRK08596 386 ----LEEAHSVNEKVEIEQLIEYTKVITAFIYEWCHTKK 420 (421)
T ss_pred ----ccccCCCCceEEHHHHHHHHHHHHHHHHHHhCCCC
Confidence 23599999999999999999999999999998764
No 13
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-50 Score=404.73 Aligned_cols=360 Identities=21% Similarity=0.191 Sum_probs=289.9
Q ss_pred HHHHHHHHHHHhCCCCCc-----chHHHHHHHHHHHHhCCCc-eeec---C----C--CceEEEEEcCC-CCCEEEEEEe
Q 013571 55 EWMRRIRRRIHENPELGF-----EEYETSQLVRSELDSLGIE-YTWP---V----A--KTGIVASVGSG-GEPWFGLRAE 118 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~-----~e~~~~~~l~~~l~~~G~~-~~~~---~----~--~~nv~~~~~~~-~~~~i~~~~H 118 (440)
+++++++++|++|||+|+ +|.++++||.++|+++||+ ++.. + + ++|++++++++ ++++|+|+||
T Consensus 5 ~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll~~H 84 (400)
T PRK13983 5 DEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWIISH 84 (400)
T ss_pred HHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEEEee
Confidence 789999999999999984 4889999999999999998 7542 1 1 58999999764 3479999999
Q ss_pred cccCCCCCCCCC---cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHH
Q 013571 119 MDALPLQEMVEW---EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIK 189 (440)
Q Consensus 119 ~D~vp~~~~~~~---~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~ 189 (440)
+||||+++...| ||.. .++|++|||| ||++++++|.|+++|++.+..++++|.|+|++|||.+ .|+.++++
T Consensus 85 ~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~~~ 164 (400)
T PRK13983 85 MDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYLLK 164 (400)
T ss_pred ccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHHHh
Confidence 999998764445 6663 5689999999 5899999999999999988789999999999999954 48999987
Q ss_pred c--CCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHH-hhccc-
Q 013571 190 E--GAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQH-IVSRE- 265 (440)
Q Consensus 190 ~--~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~-~~~~~- 265 (440)
. +.+.+.|++++.+ .+.+++... ...++|..+++|+++|+++|+|.|+.|+||+..+++++.++++ +....
T Consensus 165 ~~~~~~~~~d~~i~~~--~~~~~~~~i---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 239 (400)
T PRK13983 165 KHPELFKKDDLILVPD--AGNPDGSFI---EIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEKFN 239 (400)
T ss_pred hcccccCCCCEEEEec--CCCCCCcee---EEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 6 5555678777633 344555421 2345799999999999999999999999999999999999987 32111
Q ss_pred -CCC---CCCeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCC
Q 013571 266 -TDP---LEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHY 340 (440)
Q Consensus 266 -~~~---~~~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 340 (440)
.++ ....+++++.+.+| ...|+||++|++++|+|+.|+++.+++.++|++++++.+..++.+++++.... ..+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~-~~~~ 318 (400)
T PRK13983 240 AKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQR-EQAP 318 (400)
T ss_pred ccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeec-cCCc
Confidence 111 12346777888877 58999999999999999999999999999999999987766677777765210 1123
Q ss_pred CCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013571 341 PATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 419 (440)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~ 419 (440)
.+++.++++++.+.+++++++|.++. +....|+||++++... +|++. +||+.. .+|++||+|+++++.+
T Consensus 319 ~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~td~~~~~~~gip~v~--~Gp~~~------~~H~~nE~v~i~~l~~ 388 (400)
T PRK13983 319 PPTPPDSEIVKKLKRAIKEVRGIEPK--VGGIGGGTVAAFLRKKGYPAVV--WSTLDE------TAHQPNEYAKISNLIE 388 (400)
T ss_pred cCCCCCcHHHHHHHHHHHHhcCCCce--eeeecCcHHHHHHHHcCCCEEE--eCCccc------cCCCCCceeeHHHHHH
Confidence 35667899999999999998887654 2457888999999876 88876 476543 4999999999999999
Q ss_pred HHHHHHHHHHH
Q 013571 420 GAALHAAVAIS 430 (440)
Q Consensus 420 ~~~~~~~~~~~ 430 (440)
++++|++++.+
T Consensus 389 ~~~~~~~~~~~ 399 (400)
T PRK13983 389 DAKVFALLLLE 399 (400)
T ss_pred HHHHHHHHHhc
Confidence 99999998864
No 14
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=4.2e-50 Score=396.60 Aligned_cols=353 Identities=20% Similarity=0.269 Sum_probs=282.1
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec--CCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCC---cc
Q 013571 58 RRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP--VAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW---EH 132 (440)
Q Consensus 58 ~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~---~~ 132 (440)
++++++|++|||+|++|.++++||.++|+++||+++.. .+..|++++.++ ++|+|+|++|+||||+++.+.| ||
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 57899999999999999999999999999999998652 346789998744 4589999999999998754444 67
Q ss_pred cc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcCC--CCCCCEEEEecc
Q 013571 133 KS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGA--VDKFQGMFGIHI 204 (440)
Q Consensus 133 ~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~~--~~~~d~~~~~~~ 204 (440)
.. .++|++|||| +|+++++++.|++.+.+.+..++++|.|+|++|||++ .|+..+++... ...+|++++.++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 64 5689999999 5899999999999998877778899999999999954 48888775311 125789888775
Q ss_pred CCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCeEEEEEEEecCC
Q 013571 205 SPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-TDPLEARVVTVGFIDAGQ 283 (440)
Q Consensus 205 ~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~~~~i~gG~ 283 (440)
......+.. ....++|..+++++++|+++|++.|+.|.||+..+++++..|++..... ......++++++.|+||.
T Consensus 161 ~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGDV---IKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCce---EEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 432222211 1223479999999999999999999999999999999999998663221 112345689999999996
Q ss_pred -cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcC
Q 013571 284 -AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVG 362 (440)
Q Consensus 284 -~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 362 (440)
..|+||++|++++|+|+.|+++.+++.++|+++++. ++.++++++. ....|...+++++++.+.+++++.+|
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~~---~~~~p~~~~~~~~~~~~~~a~~~~~g 310 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEWS---LSGEPFLTNDGKLIDKAREAIEETNG 310 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEEe---cCCcceeCCCCHHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999998764 3666776652 12222233488999999999999888
Q ss_pred CCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 363 EPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 363 ~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
.++. +...+|+||++++... +|++. +||+.. .+|++||+++++++.+++++|++++.+|
T Consensus 311 ~~~~--~~~~~g~~d~~~~~~~g~p~~~--~Gp~~~------~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 311 IKPE--LSTGGGTSDGRFIALMGAEVVE--FGPVNA------TIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCCc--eecCCCCchHHHHHHcCCCEEE--ecCCcc------cCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 7553 2466788999999887 78654 777643 3899999999999999999999999764
No 15
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=8.6e-50 Score=398.23 Aligned_cols=363 Identities=15% Similarity=0.110 Sum_probs=285.6
Q ss_pred HHHHHHHHHHHhCCCCCcc--hHHHHHHHHHHHHhCCCceee---cCCCceEEEEEcCC-C-CCEEEEEEecccCCCCC-
Q 013571 55 EWMRRIRRRIHENPELGFE--EYETSQLVRSELDSLGIEYTW---PVAKTGIVASVGSG-G-EPWFGLRAEMDALPLQE- 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~--e~~~~~~l~~~l~~~G~~~~~---~~~~~nv~~~~~~~-~-~~~i~~~~H~D~vp~~~- 126 (440)
++++++|++|++|||++++ +.++++|+.++|+++|++++. ..+++|++++++++ + .|+|+|+|||||||+++
T Consensus 9 ~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~~ 88 (400)
T TIGR01880 9 DIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFRE 88 (400)
T ss_pred HHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCcc
Confidence 7889999999999999764 678999999999999998754 23678999999654 3 38999999999999864
Q ss_pred -CCCCcccc--cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcCCCCCCCE
Q 013571 127 -MVEWEHKS--KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAVDKFQG 198 (440)
Q Consensus 127 -~~~~~~~~--~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~~~~~~d~ 198 (440)
|..+||.. .++|++|||| ||++++++|+|+++|++.+..++++|.|+|++|||.+ .|++.+++++.+...|.
T Consensus 89 ~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~~ 168 (400)
T TIGR01880 89 HWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALNL 168 (400)
T ss_pred cCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCce
Confidence 45567875 3589999999 4899999999999999988788999999999999954 39999998776666678
Q ss_pred EEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhc-------c--cCCCC
Q 013571 199 MFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVS-------R--ETDPL 269 (440)
Q Consensus 199 ~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~-------~--~~~~~ 269 (440)
.++++++...|++.. ..+..++|..+++|+++|+++|++.|. +.||+..+++++..|+++.. . .....
T Consensus 169 ~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 245 (400)
T TIGR01880 169 GFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAIG 245 (400)
T ss_pred EEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCcccccc
Confidence 887754322334422 234467899999999999999999874 57999999999998876521 1 11112
Q ss_pred CCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCC-CcCCCHH
Q 013571 270 EARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYP-ATVNDEK 348 (440)
Q Consensus 270 ~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 348 (440)
..+|++++.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++. ..+++++++... ..+++ +.+.+++
T Consensus 246 ~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~ 321 (400)
T TIGR01880 246 DVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADA--GEGVTYEFSQHS--GKPLVTPHDDSNP 321 (400)
T ss_pred ccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhcc--CCceEEEEeecC--CCCCCCCCCCCCH
Confidence 247999999999999999999999999999999999999999999998752 224445543311 11111 2345789
Q ss_pred HHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 013571 349 MYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAV 427 (440)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~ 427 (440)
+++.+++++++. +.... +....|+||++++... +|++. +||+... ...+|++||+|++++|.+++++|.++
T Consensus 322 lv~~l~~a~~~~-~~~~~--~~~~~g~tDa~~~~~~gip~v~--fgp~~~~---~~~aH~~dE~i~i~~l~~~~~~~~~~ 393 (400)
T TIGR01880 322 WWVAFKDAVKEM-GCTFK--PEILPGSTDSRYIRAAGVPALG--FSPMNNT---PVLLHDHNEFLNEAVFLRGIEIYQTL 393 (400)
T ss_pred HHHHHHHHHHHc-CCeec--ceeecCcchHHHHHhCCCCeEE--ECCccCC---cccccCCCCceEHHHHHHHHHHHHHH
Confidence 999999999986 65322 3467789999999987 89754 5665321 23589999999999999999999999
Q ss_pred HHHHh
Q 013571 428 AISYL 432 (440)
Q Consensus 428 ~~~~~ 432 (440)
+..+.
T Consensus 394 l~~~~ 398 (400)
T TIGR01880 394 ISALA 398 (400)
T ss_pred HHHhh
Confidence 99875
No 16
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=6.1e-50 Score=398.49 Aligned_cols=366 Identities=16% Similarity=0.178 Sum_probs=286.3
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccC
Q 013571 43 ELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDAL 122 (440)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~v 122 (440)
++.+.+++++ +++++++++|+++||++++|.++++||.++|+++|+++.......|++++++. ++|+|+|+||+|||
T Consensus 3 ~~~~~i~~~~--~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~-~~~~l~l~~H~DtV 79 (395)
T TIGR03320 3 QIKSEAKKYR--GDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGH-GPKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHHHHHH--HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCC-CCcEEEEEeccccc
Confidence 3555666665 89999999999999999999999999999999999984333334679999853 34899999999999
Q ss_pred CCCCCCCC---cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccc--hHHHHHcCCC
Q 013571 123 PLQEMVEW---EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGG--AYYMIKEGAV 193 (440)
Q Consensus 123 p~~~~~~~---~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G--~~~l~~~~~~ 193 (440)
|+++...| ||.. +++|++|||| ||++++++|.|+++|++.+..+++++.|++++|||.++| ...++++..+
T Consensus 80 p~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03320 80 GIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI 159 (395)
T ss_pred CCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC
Confidence 98776666 5653 5689999999 699999999999999988877888999999999995443 4566655433
Q ss_pred CCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCC-CCC
Q 013571 194 DKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-TDP-LEA 271 (440)
Q Consensus 194 ~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~-~~~ 271 (440)
.+|++++.+++. ..+ ...++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++.... .++ .+.
T Consensus 160 -~~d~~iv~ep~~----~~i----~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03320 160 -KPEFVVITEPTD----MNI----YRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEEcCCCc----cce----EEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCc
Confidence 478888866421 111 223589999999999999999999999999999999999998874321 122 234
Q ss_pred eEEEEEEEecCC-cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEecccc-----------CC
Q 013571 272 RVVTVGFIDAGQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKM-----------RH 339 (440)
Q Consensus 272 ~t~~~~~i~gG~-~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~-----------~~ 339 (440)
.+++++.|++|. ..|+||++|++++|+|+.|+++.+++.++|++++... +..+++++..... ..
T Consensus 231 ~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T TIGR03320 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAKVEMYNYDRPSYTGLVYPTECY 306 (395)
T ss_pred CceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhc----CCCceEeeeccCcccccccccccccc
Confidence 689999999875 8999999999999999999999999999999986532 2233333311000 11
Q ss_pred CCC--cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHH-HHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCC
Q 013571 340 YPA--TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFS-FYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDED 415 (440)
Q Consensus 340 ~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~-~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~ 415 (440)
+|+ ++.++|+++++.+++++++|.++.. ...++++|++ ++... +|++. +||+. ...+|++||||+++
T Consensus 307 ~~~~~~~~~~~~v~~l~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~g~p~v~--~Gpg~-----~~~aH~~nE~v~i~ 377 (395)
T TIGR03320 307 FPTWVLPEDHLITKAALETYKRLFGKEPGV--DKWTFSTNGVSIMGRHGIPVIG--FGPGD-----EDQAHAPNEKTWKE 377 (395)
T ss_pred cCccccCCCCHHHHHHHHHHHHHhCCCCce--eecceecccceehhhcCCCEEE--ECCCc-----hhhccCCCcEEEHH
Confidence 333 4567899999999999998886532 3566778874 55555 88765 77754 34699999999999
Q ss_pred chHHHHHHHHHHHHHHhc
Q 013571 416 ALPIGAALHAAVAISYLD 433 (440)
Q Consensus 416 ~l~~~~~~~~~~~~~~~~ 433 (440)
++.+++++|++++.+||+
T Consensus 378 ~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 378 DLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999999984
No 17
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=8.9e-50 Score=397.65 Aligned_cols=370 Identities=15% Similarity=0.142 Sum_probs=292.3
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEeccc
Q 013571 42 RELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDA 121 (440)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~ 121 (440)
..+.++++.+. +++++++++|+++||+|++|.+++++|.++|+++||++...+...|+++++++++ |+|+|++|+||
T Consensus 4 ~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~~-~~i~~~~H~Dt 80 (399)
T PRK13004 4 KLILMLAEKYK--ADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHGK-KLIAFDAHIDT 80 (399)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCCC-cEEEEEeccCc
Confidence 45666777766 8999999999999999999999999999999999998654445678999997654 89999999999
Q ss_pred CCCCCCCCC---ccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc--ccchHHHHHcCC
Q 013571 122 LPLQEMVEW---EHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG--YGGAYYMIKEGA 192 (440)
Q Consensus 122 vp~~~~~~~---~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~--~~G~~~l~~~~~ 192 (440)
||+++...| ||. ..++|++|||| ||++++++|+|+++|++.+..++++|.|+|++|||. +.|+.++++++.
T Consensus 81 Vp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~ 160 (399)
T PRK13004 81 VGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDK 160 (399)
T ss_pred cCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcC
Confidence 998764445 565 45689999999 489999999999999998877899999999999994 346778887644
Q ss_pred CCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc--cCCCCC
Q 013571 193 VDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR--ETDPLE 270 (440)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~--~~~~~~ 270 (440)
+ .+|++++.++.. ..+ ...++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++... ......
T Consensus 161 ~-~~d~~i~~e~~~----~~i----~~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 231 (399)
T PRK13004 161 I-KPDFVVITEPTD----LNI----YRGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLG 231 (399)
T ss_pred C-CCCEEEEccCCC----Cce----EEecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCC
Confidence 4 478888866421 111 12357999999999999999999999999999999999999887543 222234
Q ss_pred CeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEecc---------ccCCC
Q 013571 271 ARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEE---------KMRHY 340 (440)
Q Consensus 271 ~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~---------~~~~~ 340 (440)
..+++++.|.+| .+.|+||++|++++|+|+.|+++.+++.++++++.+. ...+.++++..... ....+
T Consensus 232 ~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T PRK13004 232 KGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYF 309 (399)
T ss_pred CceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCcccccccccccc
Confidence 568899999876 5899999999999999999999999999999988432 22344444321000 01123
Q ss_pred CC--cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHH-H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCc
Q 013571 341 PA--TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ-R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDA 416 (440)
Q Consensus 341 ~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~ 416 (440)
|+ ++.++++++.+.+++++.+|.++. ....++++|++.+.+ . +|++. +||+. ...+|++||+|++++
T Consensus 310 p~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~~~td~~~~~~~~Gip~v~--~Gpg~-----~~~aH~~nE~i~i~~ 380 (399)
T PRK13004 310 PTWLYPEDHEFVKAAVEAYKGLFGKAPE--VDKWTFSTNGVSIAGRAGIPTIG--FGPGK-----EPLAHAPNEYTWKEQ 380 (399)
T ss_pred cccccCCCCHHHHHHHHHHHHHhCCCCe--ecccccccCCeEEehhcCCCEEE--ECCCc-----ccccCCCCceeEHHH
Confidence 43 446799999999999999887553 235677888877754 4 88765 67653 235999999999999
Q ss_pred hHHHHHHHHHHHHHHhcc
Q 013571 417 LPIGAALHAAVAISYLDN 434 (440)
Q Consensus 417 l~~~~~~~~~~~~~~~~~ 434 (440)
+.+++++|++++.++|+.
T Consensus 381 l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 381 LVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999999953
No 18
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=8.5e-50 Score=397.29 Aligned_cols=365 Identities=16% Similarity=0.160 Sum_probs=286.4
Q ss_pred HHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCC
Q 013571 44 LLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALP 123 (440)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp 123 (440)
+.+++++++ +++++++++|+++||++++|.++++||.++|+++||++...+...|+++.++++ .|+|+|+||+||||
T Consensus 4 ~~~~~~~~~--~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtVp 80 (395)
T TIGR03526 4 IKSEAEKYR--GDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTVG 80 (395)
T ss_pred HHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeeccccC
Confidence 455666665 899999999999999999999999999999999999853333346799998533 38899999999999
Q ss_pred CCCCCCC---cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcCCCC
Q 013571 124 LQEMVEW---EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAVD 194 (440)
Q Consensus 124 ~~~~~~~---~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~~~~ 194 (440)
+++...| ||.. .++|++|||| |||+++++|.|++.|++.+..+++++.|++++|||++ .|+..+++++.+
T Consensus 81 ~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~- 159 (395)
T TIGR03526 81 IGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI- 159 (395)
T ss_pred CCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC-
Confidence 8776666 5653 5689999999 7999999999999999888767889999999999943 356777776554
Q ss_pred CCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCC-CCCe
Q 013571 195 KFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-TDP-LEAR 272 (440)
Q Consensus 195 ~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~-~~~~ 272 (440)
.+|++++.+++. ..+ ...++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+++.... .++ .+..
T Consensus 160 ~~d~~i~~ep~~----~~i----~~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (395)
T TIGR03526 160 KPEFVVITEPTD----MNI----YRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKG 231 (395)
T ss_pred CCCEEEecCCCC----ceE----EEEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCcc
Confidence 478888866421 111 223589999999999999999999999999999999999998874321 122 2356
Q ss_pred EEEEEEEecCC-cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccC-----------CC
Q 013571 273 VVTVGFIDAGQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMR-----------HY 340 (440)
Q Consensus 273 t~~~~~i~gG~-~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~-----------~~ 340 (440)
+++++.|++|. ..|+||++|++++|+|+.|+++.+++.++|+++++.. +..+++++...... .+
T Consensus 232 ~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (395)
T TIGR03526 232 TLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAEVEMYEYDRPSYTGLVYPTECYF 307 (395)
T ss_pred ceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc----CCcceEEEecccccccccccccccccc
Confidence 99999999875 8999999999999999999999999999999987542 22333332110000 23
Q ss_pred CC--cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHH-HHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCc
Q 013571 341 PA--TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSF-YTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDA 416 (440)
Q Consensus 341 ~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~-~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~ 416 (440)
|+ ++.++++++++.+++++++|..+.. ...++++|+++ +.+. +|++. +||+. ...+|++||||++++
T Consensus 308 p~~~~~~~~~~~~~l~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~g~p~v~--~Gpg~-----~~~aH~~dE~i~i~~ 378 (395)
T TIGR03526 308 PTWVLPEDHLITKAALETYKRLFGKEPGV--DKWTFSTNGVSIMGRHGIPVIG--FGPGD-----EDQAHAPNEKTWKED 378 (395)
T ss_pred CccccCCCCHHHHHHHHHHHHHhCCCCce--eeeeeecccceehhhcCCCEEE--ECCcc-----hhhccCCCceEEHHH
Confidence 33 4567999999999999998875532 35667788754 4555 88765 77753 245999999999999
Q ss_pred hHHHHHHHHHHHHHHhc
Q 013571 417 LPIGAALHAAVAISYLD 433 (440)
Q Consensus 417 l~~~~~~~~~~~~~~~~ 433 (440)
+.+++++|++++..+++
T Consensus 379 l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03526 379 LVKAAAMYAAIPTVYLQ 395 (395)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999999874
No 19
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=1.9e-50 Score=399.66 Aligned_cols=348 Identities=18% Similarity=0.199 Sum_probs=280.2
Q ss_pred HHHHHHHhCCC---CCcchHHHHHHHHHHHHhCCCceeec---CCCc----eEEEEEcCC-CCCEEEEEEecccCCCCCC
Q 013571 59 RIRRRIHENPE---LGFEEYETSQLVRSELDSLGIEYTWP---VAKT----GIVASVGSG-GEPWFGLRAEMDALPLQEM 127 (440)
Q Consensus 59 ~~~~~l~~~ps---~s~~e~~~~~~l~~~l~~~G~~~~~~---~~~~----nv~~~~~~~-~~~~i~~~~H~D~vp~~~~ 127 (440)
+++++|++||| ++++|.++++||.++|+++|++++.. .+.. |+++.+.++ ++|+|+|+|||||||.++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 56899999999 78899999999999999999998652 1222 356665544 4589999999999998754
Q ss_pred CCC---cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEE
Q 013571 128 VEW---EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGM 199 (440)
Q Consensus 128 ~~~---~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~ 199 (440)
..| ||.. .++|++|||| +|++++++|++++.|++.+..++++|.|+|++|||. +.|++.+++++.+.++|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 445 6764 5689999999 489999999999999988777899999999999994 4699999998877668888
Q ss_pred EEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC------CCCCCeE
Q 013571 200 FGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET------DPLEARV 273 (440)
Q Consensus 200 ~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~------~~~~~~t 273 (440)
++.++.. .+.+ ...++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+++..... .....++
T Consensus 162 i~~~~~~---~~~v----~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIPEPSG---GDNI----VIGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EECCCCC---CCce----EEEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 8765321 1222 1235799999999999999999999999999999999999988753211 1234579
Q ss_pred EEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHH
Q 013571 274 VTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHG 353 (440)
Q Consensus 274 ~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (440)
++++.|+||...|+||++|++++|+|+.|.++.+++.++|++++++.+...+++++++.... ..++...+.++++++++
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 313 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVK-WSGPNETPPDSRLVKAL 313 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeee-ecCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999987766666666543110 11123456789999999
Q ss_pred HHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013571 354 KRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAAL 423 (440)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~ 423 (440)
++++++.+|.++. +....|+||++++.+. +|++. +||+.. ..+|++|||++++++.+++++
T Consensus 314 ~~~~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 314 EAIIKKVRGIEPE--VLVSTGGTDARFLRKAGIPSIV--YGPGDL-----ETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHHHHHhCCCCe--EeeeccchhHHHHHHcCCcEEE--ECCCCc-----cccCCCCceeEHHHHHHHhhC
Confidence 9999998787653 2467899999999987 99865 676532 249999999999999998763
No 20
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.9e-49 Score=390.87 Aligned_cols=349 Identities=19% Similarity=0.193 Sum_probs=280.8
Q ss_pred HHHHHHHHHHHhCCCCCcch-------HHHHHHHHHHHHhCCCceeec-----CCCceEEEEEcCCCCCEEEEEEecccC
Q 013571 55 EWMRRIRRRIHENPELGFEE-------YETSQLVRSELDSLGIEYTWP-----VAKTGIVASVGSGGEPWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e-------~~~~~~l~~~l~~~G~~~~~~-----~~~~nv~~~~~~~~~~~i~~~~H~D~v 122 (440)
+++++++++|++|||+|++| .++++||.++|+++|++++.. .++.|+++++++++ ++|+|+||||||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~~-~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSGE-GGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCCC-CeEEEEeeecee
Confidence 67899999999999999875 569999999999999987642 24679999995433 689999999999
Q ss_pred CCCC--CCCCccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCC
Q 013571 123 PLQE--MVEWEHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDK 195 (440)
Q Consensus 123 p~~~--~~~~~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~ 195 (440)
|+++ |..+||+ .+++|++|||| |||+++++|.+++.|++.+ ++++|.|+|++|||. +.|++++++++.+.
T Consensus 84 p~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~- 160 (383)
T PRK05111 84 PFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLTK--LKKPLYILATADEETSMAGARAFAEATAIR- 160 (383)
T ss_pred cCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhcC--CCCCeEEEEEeccccCcccHHHHHhcCCCC-
Confidence 9854 4556787 46789999999 6999999999999998753 678999999999994 46999999886553
Q ss_pred CCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhc----ccCCC---
Q 013571 196 FQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVS----RETDP--- 268 (440)
Q Consensus 196 ~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~----~~~~~--- 268 (440)
.|++++.++ ++.. ....++|..+++|+++|+++|+|.|+.|.|||..+++++.+++++.. +...+
T Consensus 161 ~d~~i~~ep-----~~~~---~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~ 232 (383)
T PRK05111 161 PDCAIIGEP-----TSLK---PVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAFT 232 (383)
T ss_pred CCEEEEcCC-----CCCc---eeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccCC
Confidence 577777443 3321 12245799999999999999999999999999999999999987642 11111
Q ss_pred CCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCC--cCCC
Q 013571 269 LEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA--TVND 346 (440)
Q Consensus 269 ~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 346 (440)
...+|+|++.|+||...|+||++|++.+|+|+.|+++.+++.+++++.+++.+..++.+++++.. ...+|+ .+.+
T Consensus 233 ~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 309 (383)
T PRK05111 233 VPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPL---HPPIPGYECPAD 309 (383)
T ss_pred CCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEecc---ccCCCCcCCCCC
Confidence 24679999999999999999999999999999999999999999999999888878877777542 123343 3456
Q ss_pred HHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHH
Q 013571 347 EKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHA 425 (440)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~ 425 (440)
+++++.+.+++ |.++ ...++++|+.++... +|++. +||+. ...+|++||+++++++.+++++|+
T Consensus 310 ~~l~~~~~~~~----g~~~----~~~~~~~Da~~~~~~g~p~v~--~G~g~-----~~~~H~~~E~v~~~~l~~~~~i~~ 374 (383)
T PRK05111 310 HQLVRVVEKLL----GHKA----EVVNYCTEAPFIQQLGCPTLV--LGPGS-----IEQAHQPDEYLELSFIKPTRELLR 374 (383)
T ss_pred CHHHHHHHHHh----CCCC----ceeeeeccHHHHHhcCCCEEE--ECCCc-----hHhCcCCCCcccHHHHHHHHHHHH
Confidence 78888776543 5533 234578999998776 78766 56653 234999999999999999999999
Q ss_pred HHHHHHhc
Q 013571 426 AVAISYLD 433 (440)
Q Consensus 426 ~~~~~~~~ 433 (440)
+++.+++.
T Consensus 375 ~~~~~~~~ 382 (383)
T PRK05111 375 QLIHHFCL 382 (383)
T ss_pred HHHHHHhc
Confidence 99998864
No 21
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-49 Score=399.77 Aligned_cols=360 Identities=15% Similarity=0.140 Sum_probs=281.1
Q ss_pred HHHHHHHHHHHhCCCCC--cchHHHHHHHHHHHHhCCCcee---e---cCCCceEEEEEcCC-CCCEEEEEEecccCCCC
Q 013571 55 EWMRRIRRRIHENPELG--FEEYETSQLVRSELDSLGIEYT---W---PVAKTGIVASVGSG-GEPWFGLRAEMDALPLQ 125 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s--~~e~~~~~~l~~~l~~~G~~~~---~---~~~~~nv~~~~~~~-~~~~i~~~~H~D~vp~~ 125 (440)
+++++++++|++|||++ ++|.++++||.++|+++|++++ . ...++|++++++++ ++|+|+|+|||||||++
T Consensus 37 ~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp~~ 116 (472)
T PRK09133 37 QAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVEAK 116 (472)
T ss_pred HHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCCCC
Confidence 78999999999999998 6788999999999999999753 2 23578999999664 45899999999999985
Q ss_pred C--CCCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC-cc-cchHHHHHcCCC-CCC
Q 013571 126 E--MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GY-GGAYYMIKEGAV-DKF 196 (440)
Q Consensus 126 ~--~~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE-~~-~G~~~l~~~~~~-~~~ 196 (440)
+ |...||.. ++||++|||| |||+++++|+++++|++.+..++++|.|+|++||| ++ .|++.++++... -+.
T Consensus 117 ~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~~ 196 (472)
T PRK09133 117 REDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLIDA 196 (472)
T ss_pred hhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhccCe
Confidence 3 44556763 5689999999 58999999999999998887889999999999999 54 588998876431 135
Q ss_pred CEEEEeccCC------CCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-----
Q 013571 197 QGMFGIHISP------VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE----- 265 (440)
Q Consensus 197 d~~~~~~~~~------~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~----- 265 (440)
|++++ +++. +.|+.. .....+||..+++|+++|+++|+|.|+ +.|||..+++++.+|+++..+.
T Consensus 197 ~~~i~-e~~~~~~~~~gept~~---~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~~~ 271 (472)
T PRK09133 197 EFALN-EGGGGTLDEDGKPVLL---TVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLNDV 271 (472)
T ss_pred EEEEE-CCCccccCCCCCceEE---EeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccCCc
Confidence 77776 6432 222211 123456899999999999999999996 5899999999999997641100
Q ss_pred -----------------------------------------CCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChh
Q 013571 266 -----------------------------------------TDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTE 304 (440)
Q Consensus 266 -----------------------------------------~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~ 304 (440)
..+...+|+|++.|+||...|+||++|++++|+|+.|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p~~ 351 (472)
T PRK09133 272 TRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFPGD 351 (472)
T ss_pred cHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCCch
Confidence 001235799999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhc-CCCCcccCCCCcccccHHHHHH
Q 013571 305 GLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMV-GEPNVHLTPVEMGAEDFSFYTQ 383 (440)
Q Consensus 305 ~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~g~tD~~~~~~ 383 (440)
+.+++.++|+++++. . .++++.... ..+.++.+.++++++.++++.++++ |.+. .+..+.|+||++++..
T Consensus 352 ~~e~v~~~I~~~i~~----~--~v~v~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ggtDa~~~~~ 422 (472)
T PRK09133 352 TIEAVRATLKQVVAD----P--AIKITRIGD-PSPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMSTGATDGRYLRA 422 (472)
T ss_pred hHHHHHHHHHHHhcC----C--CEEEEEccC-CCCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccccccchHHHHh
Confidence 999999999998863 2 344443211 1223345667899999999999987 4432 1346788999999987
Q ss_pred H-hccceE--EEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 384 R-MPAAHF--YVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 384 ~-~p~v~~--~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
. +|++.+ .+||+. ...+|++||||+++++.+++++|++++.++++
T Consensus 423 ~gip~~~~~~i~gp~~-----~~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 423 AGIPTYGVSGLFGDPD-----DTFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred cCCCceeecCcccCcc-----cccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 6 787532 134432 24589999999999999999999999998864
No 22
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.7e-49 Score=391.40 Aligned_cols=350 Identities=19% Similarity=0.220 Sum_probs=278.2
Q ss_pred HHHHHHHHHHHhCCCCCcch-HHHHHHHHHHHHhCCCceeec----CCCceEEEEEcCCCCCEEEEEEecccCCCCC--C
Q 013571 55 EWMRRIRRRIHENPELGFEE-YETSQLVRSELDSLGIEYTWP----VAKTGIVASVGSGGEPWFGLRAEMDALPLQE--M 127 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e-~~~~~~l~~~l~~~G~~~~~~----~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~--~ 127 (440)
.++++++++|++|||+|+++ .++++||.++|+++|+++++. .+++|++++++++++|+|+|+||+||||+++ |
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~~~W 83 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDGQAW 83 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCCCCC
Confidence 56889999999999999887 499999999999999997652 3468999999765568999999999999864 3
Q ss_pred CCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCC--CCCCCEEE
Q 013571 128 VEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGA--VDKFQGMF 200 (440)
Q Consensus 128 ~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~--~~~~d~~~ 200 (440)
...||+. .++|++|||| |||+++++|+|+++|++.+ ++++|.|+|++|||. +.|+++++++.. ...+|+++
T Consensus 84 ~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i 161 (385)
T PRK07522 84 TSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAAP--LRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGCI 161 (385)
T ss_pred CCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhCC--CCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEEE
Confidence 3456774 4689999999 5999999999999998763 678999999999994 479999987532 12468877
Q ss_pred EeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC-----C---CCCe
Q 013571 201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETD-----P---LEAR 272 (440)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~-----~---~~~~ 272 (440)
+.++ ++. .....++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..+... . ...+
T Consensus 162 ~~ep-----~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 233 (385)
T PRK07522 162 VGEP-----TSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPYS 233 (385)
T ss_pred EccC-----CCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCcc
Confidence 6443 221 1123457999999999999999999999999999999999999876432211 1 1236
Q ss_pred EEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHH------HHHHcCCeEEEEEeccccCCCCCcC--
Q 013571 273 VVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEM------QAAVHQCSATIDFLEEKMRHYPATV-- 344 (440)
Q Consensus 273 t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~------~~~~~~~~~~~~~~~~~~~~~~~~~-- 344 (440)
+++++.|+||...|+||++|++++|+|+.|+++.+++.++|++.+++ .+...+++++++. ...+|+..
T Consensus 234 t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~ 309 (385)
T PRK07522 234 TLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP----LSAYPGLDTA 309 (385)
T ss_pred eeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe----ccCCCCCCCC
Confidence 89999999999999999999999999999999999999999999987 2344566777665 33455553
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAAL 423 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~ 423 (440)
.++++++.++++. +... .....++||++++... +|++. +||+. ...+|++||+|+++++.+++++
T Consensus 310 ~~~~~v~~~~~~~----~~~~---~~~~~~~td~~~~~~~gip~v~--~Gpg~-----~~~~H~~~E~i~i~~l~~~~~~ 375 (385)
T PRK07522 310 EDAAAARLVRALT----GDND---LRKVAYGTEAGLFQRAGIPTVV--CGPGS-----IEQAHKPDEFVELAQLAACEAF 375 (385)
T ss_pred CCcHHHHHHHHHh----CCCC---cceEeeecchHHhccCCCCEEE--ECCCC-----hhhCCCCCccccHHHHHHHHHH
Confidence 4588888887654 3322 1245678999999876 88765 66643 2359999999999999999999
Q ss_pred HHHHHHHHh
Q 013571 424 HAAVAISYL 432 (440)
Q Consensus 424 ~~~~~~~~~ 432 (440)
|..++..+.
T Consensus 376 ~~~~~~~~~ 384 (385)
T PRK07522 376 LRRLLASLA 384 (385)
T ss_pred HHHHHHHHh
Confidence 999998764
No 23
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=7.4e-49 Score=391.07 Aligned_cols=354 Identities=19% Similarity=0.217 Sum_probs=288.0
Q ss_pred HHHHHHHHHHHhCCCCC---cchHHHHHHHHHHHHhCCCceeecC---C--------CceEEEEEcCCCCCEEEEEEecc
Q 013571 55 EWMRRIRRRIHENPELG---FEEYETSQLVRSELDSLGIEYTWPV---A--------KTGIVASVGSGGEPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s---~~e~~~~~~l~~~l~~~G~~~~~~~---~--------~~nv~~~~~~~~~~~i~~~~H~D 120 (440)
+++++++++|++|||+| .++.++++||.++|+++|++++... + ++|+++..++++ |+|+|+||+|
T Consensus 6 ~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ill~~HlD 84 (394)
T PRK08651 6 FDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSGN-PHLHFNGHYD 84 (394)
T ss_pred HHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCCC-ceEEEEeeee
Confidence 89999999999999998 5678899999999999999876521 1 245777764444 8999999999
Q ss_pred cCCCCCC--CCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCC
Q 013571 121 ALPLQEM--VEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAV 193 (440)
Q Consensus 121 ~vp~~~~--~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~ 193 (440)
|||+++. ...||.. .++|++|||| ||++++++|++++.|++.+ +++|.|+|++|||.+ .|++++++++.+
T Consensus 85 tvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~~~~ 161 (394)
T PRK08651 85 VVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEEGKV 161 (394)
T ss_pred eecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhccCC
Confidence 9998653 3456775 4689999999 4899999999999998764 799999999999954 699999998765
Q ss_pred CCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC------C
Q 013571 194 DKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET------D 267 (440)
Q Consensus 194 ~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~------~ 267 (440)
+.|++++.++.. . +.+. ..++|..+++|+++|+++|++.|+.|.||+..+++++.+|++...+.. .
T Consensus 162 -~~d~~i~~~~~~--~-~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~ 233 (394)
T PRK08651 162 -TPDYVIVGEPSG--L-DNIC----IGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYEYDD 233 (394)
T ss_pred -CCCEEEEecCCC--C-CceE----EecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 368888766322 1 1221 235799999999999999999999999999999999999986532111 1
Q ss_pred -CCCCeEEEEEE--EecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCc-
Q 013571 268 -PLEARVVTVGF--IDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPAT- 343 (440)
Q Consensus 268 -~~~~~t~~~~~--i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~- 343 (440)
.....+++++. |+||.+.|+||++|++++|+|+.|.++.+++.+++++++++.+..++++++++. ...+++.
T Consensus 234 ~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~----~~~~~~~~ 309 (394)
T PRK08651 234 ERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEI----TPFSEAFV 309 (394)
T ss_pred cccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEE----ecccCCcc
Confidence 12345788888 999999999999999999999999999999999999999988887887777765 2333443
Q ss_pred -CCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 013571 344 -VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGA 421 (440)
Q Consensus 344 -~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~ 421 (440)
+.++++++.+++++++++|.++. +....|+||+++|... +|++. +||+.. ..+|++||+++++++.+++
T Consensus 310 ~~~~~~l~~~~~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~i~~~~l~~~~ 380 (394)
T PRK08651 310 TDPDSELVKALREAIREVLGVEPK--KTISLGGTDARFFGAKGIPTVV--YGPGEL-----ELAHAPDEYVEVKDVEKAA 380 (394)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCc--eeeecCcccHHHHhhCCCcEEE--ECCCCh-----HhcCCCCceeEHHHHHHHH
Confidence 44678999999999998787653 2467799999999987 89865 566532 2599999999999999999
Q ss_pred HHHHHHHHHHhc
Q 013571 422 ALHAAVAISYLD 433 (440)
Q Consensus 422 ~~~~~~~~~~~~ 433 (440)
++|.+++.++.+
T Consensus 381 ~i~~~~i~~l~~ 392 (394)
T PRK08651 381 KVYEEVLKRLAK 392 (394)
T ss_pred HHHHHHHHHhhc
Confidence 999999998843
No 24
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-49 Score=396.45 Aligned_cols=361 Identities=14% Similarity=0.116 Sum_probs=278.0
Q ss_pred HHHHHHHHHHHhCCCCCcc-h--HHHHHHHHHHHHhCCCceeec--CCCceEEEEEcCCCCCEEEEEEecccCCCCC---
Q 013571 55 EWMRRIRRRIHENPELGFE-E--YETSQLVRSELDSLGIEYTWP--VAKTGIVASVGSGGEPWFGLRAEMDALPLQE--- 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~-e--~~~~~~l~~~l~~~G~~~~~~--~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~--- 126 (440)
+++++++++|++|||++++ + .++++||.++|+++|++++.. .+++|++++++++++|+|+|+||+||||+++
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 5678999999999999964 3 689999999999999998653 3678999999754458999999999999865
Q ss_pred CCCCccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCC-CCCCCEEE
Q 013571 127 MVEWEHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGA-VDKFQGMF 200 (440)
Q Consensus 127 ~~~~~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~-~~~~d~~~ 200 (440)
|...||. .++||++|||| |||+++++|.|++.+++.+ .++++|.|+|++|||. +.|++.++++.. .-+.|+++
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 4445676 45689999999 6999999999999887654 5788999999999994 568888876521 11467776
Q ss_pred EeccCCCCCCCcccccCCCcccceeEEEEEEEe--cCCCCCCCCCCCCHHHHHHHHHHHHHHhhc---------------
Q 013571 201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKG--KGGHAAMPQDTRDPVLAASFAILTLQHIVS--------------- 263 (440)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G--~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~--------------- 263 (440)
+ ++....+.+...+ ...++|..+++++++| +++|+|.|+.|.||+..+++++.+|.+...
T Consensus 161 ~-E~~~~~~~~~~~i--~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 M-EGAGLDPKGRPQI--VLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred E-CCCCccCCCCeEE--EEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 4 5432213332111 2346899999999999 999999999999999999999999975410
Q ss_pred --------cc----------C---------------CCCCCeEEEEEEEecC----CcccccccceEEEEEEecCChhhH
Q 013571 264 --------RE----------T---------------DPLEARVVTVGFIDAG----QAGNIIPEIVRFGGTFRSLTTEGL 306 (440)
Q Consensus 264 --------~~----------~---------------~~~~~~t~~~~~i~gG----~~~n~iP~~a~~~~~~R~~~~~~~ 306 (440)
+. . .....+++|++.|.|| ...|+||++|++++|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 00 0 0112478999999887 467999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCC--cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHH-
Q 013571 307 LYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA--TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ- 383 (440)
Q Consensus 307 ~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~- 383 (440)
+++.++|++++++. +..+++++. ..+++ .+.++++++++++++++++|.++... ....|++|+++|.+
T Consensus 318 ~~v~~~l~~~~~~~----~~~~~~~~~----~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~~-~~~~g~~d~~~~~~~ 388 (436)
T PRK06446 318 YKIFELLKKHLQKV----GFNGEIIVH----GFEYPVRTSVNSKVVKAMIESAKRVYGTEPVVI-PNSAGTQPMGLFVYK 388 (436)
T ss_pred HHHHHHHHHHHHHc----CCCeEEEEc----CCcceeecCCCCHHHHHHHHHHHHHhCCCCcee-cCCCCcchHHHHHHH
Confidence 99999999998752 334555542 22222 45679999999999999988865322 34456678888866
Q ss_pred H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 384 R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 384 ~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
. +|++...+|++.. ...+|++||||++++|.+++++|.+++.++.
T Consensus 389 ~gip~v~~~~g~g~~----~~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 389 LGIRDIVSAIGVGGY----YSNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred hCCCcceeecccCCC----CcCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 4 8887544555432 1359999999999999999999999998764
No 25
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-49 Score=403.02 Aligned_cols=366 Identities=13% Similarity=0.104 Sum_probs=276.7
Q ss_pred HHHHHHHHHHHhCCCCCcchH---------HHHHHHHHHHHhCCCceee-cCCCceEEEEEcCC-CC-CEEEEEEecccC
Q 013571 55 EWMRRIRRRIHENPELGFEEY---------ETSQLVRSELDSLGIEYTW-PVAKTGIVASVGSG-GE-PWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~---------~~~~~l~~~l~~~G~~~~~-~~~~~nv~~~~~~~-~~-~~i~~~~H~D~v 122 (440)
+++++++++|++|||+|+++. ++++||.++|+..|++++. ..++.|+++.+.++ ++ |+|+|+||+|||
T Consensus 44 ~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~DvV 123 (486)
T PRK08262 44 DAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQDVV 123 (486)
T ss_pred HHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECccccc
Confidence 889999999999999998752 4789999999999997654 22346788888554 33 899999999999
Q ss_pred CCCCC--CCC---cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCC
Q 013571 123 PLQEM--VEW---EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGA 192 (440)
Q Consensus 123 p~~~~--~~~---~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~ 192 (440)
|+++. ..| ||.. +++|++|||| |||+++++|.|++.|++.+..++++|.|+|++|||. +.|++.+++...
T Consensus 124 p~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l~ 203 (486)
T PRK08262 124 PVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELLK 203 (486)
T ss_pred CCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHHH
Confidence 98653 345 7774 5789999999 699999999999999988878899999999999994 468888875311
Q ss_pred C--CCCCEEE------Eecc--CCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 013571 193 V--DKFQGMF------GIHI--SPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIV 262 (440)
Q Consensus 193 ~--~~~d~~~------~~~~--~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~ 262 (440)
. ...++++ ..++ ..+.|++. .+.+++|..+++|+++|+++|||.|+. .||+..+++++.+|++..
T Consensus 204 ~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~----i~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~~~ 278 (486)
T PRK08262 204 ERGVRLAFVLDEGGAITEGVLPGVKKPVAL----IGVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTRLEDNP 278 (486)
T ss_pred HhcCCEEEEEeCCceecccccCCCCceEEe----eEEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhhCC
Confidence 0 1234332 1110 11223332 234468999999999999999999988 999999999999998631
Q ss_pred cc----------------c----------------------------CCCCCCeEEEEEEEecCCcccccccceEEEEEE
Q 013571 263 SR----------------E----------------------------TDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTF 298 (440)
Q Consensus 263 ~~----------------~----------------------------~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~ 298 (440)
.+ . ......+|+|++.|+||...|+||++|++++|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~~~~di 358 (486)
T PRK08262 279 LPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRATATVNF 358 (486)
T ss_pred CCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccEEEEEE
Confidence 00 0 001235789999999999999999999999999
Q ss_pred ecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccH
Q 013571 299 RSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDF 378 (440)
Q Consensus 299 R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~ 378 (440)
|+.|+++.+++.++|++++++. ++++++.. ....+.++.+.++++++++++++++.+|.... .+..+.|+||+
T Consensus 359 R~~p~~~~~~i~~~i~~~~~~~----~~~v~~~~--~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~~g~tDa 431 (486)
T PRK08262 359 RILPGDSVESVLAHVRRAVADD----RVEIEVLG--GNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLVVGATDS 431 (486)
T ss_pred EeCCCCCHHHHHHHHHHHhccC----ceEEEEec--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-ccceecccccH
Confidence 9999999999999999998742 33444332 10122334566889999999999998774222 22456789999
Q ss_pred HHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 379 SFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 379 ~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
++|....|+++.+.+...+ +|+...+|++||+++++++.+++++|.+++.++++
T Consensus 432 ~~~~~~~p~~~~~~~~~~g-pg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 432 RHYSGISDNVYRFSPLRLS-PEDLARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred HHHHHhcCCeEEECCccCC-cccccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 9998777765433222211 13345699999999999999999999999998864
No 26
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=5.5e-49 Score=388.08 Aligned_cols=338 Identities=20% Similarity=0.259 Sum_probs=271.3
Q ss_pred HHHHHHhCCCCCcch-HHHHHHHHHHHHhCCCceeecC-----CCceEEEEEcCCCCCEEEEEEecccCCCCC--CCCCc
Q 013571 60 IRRRIHENPELGFEE-YETSQLVRSELDSLGIEYTWPV-----AKTGIVASVGSGGEPWFGLRAEMDALPLQE--MVEWE 131 (440)
Q Consensus 60 ~~~~l~~~ps~s~~e-~~~~~~l~~~l~~~G~~~~~~~-----~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~--~~~~~ 131 (440)
++++|++|||+++++ .++++||.++|+++|++++... .++|++++++++++|+|+|+||+||||.++ |...|
T Consensus 2 ~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~~~w~~~P 81 (364)
T TIGR01892 2 ILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDDAAWTRDP 81 (364)
T ss_pred hHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCCCcCCCCC
Confidence 688999999999865 7999999999999999886532 468999999764458999999999999864 33456
Q ss_pred cc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEEEEeccCC
Q 013571 132 HK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISP 206 (440)
Q Consensus 132 ~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~~~ 206 (440)
|. ..++|++|||| ||++++++|+++++|++.+ ++++|.|+|++|||. +.|++++++++.+ ..|++++.+
T Consensus 82 f~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~e--- 155 (364)
T TIGR01892 82 FRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAEQ--LKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIGE--- 155 (364)
T ss_pred CcceeeCCEEEecCccccchHHHHHHHHHHHHHhcC--cCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEECC---
Confidence 77 46789999999 7999999999999998764 678999999999994 4799999988753 568877744
Q ss_pred CCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-----CC--CCCeEEEEEEE
Q 013571 207 VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET-----DP--LEARVVTVGFI 279 (440)
Q Consensus 207 ~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~-----~~--~~~~t~~~~~i 279 (440)
|++.... ..++|..+++|+++|+++|++.|+.|.|||..+++++.+|+++..... .+ ...++++++.|
T Consensus 156 --p~~~~~~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~i 230 (364)
T TIGR01892 156 --PTRLIPV---RAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIGVI 230 (364)
T ss_pred --CCCceeE---EeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEeee
Confidence 3333221 235799999999999999999999999999999999999987642111 01 12479999999
Q ss_pred ecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHH-HcCCeEEEEEeccccCCCCC--cCCCHHHHHHHHHH
Q 013571 280 DAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAA-VHQCSATIDFLEEKMRHYPA--TVNDEKMYEHGKRV 356 (440)
Q Consensus 280 ~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 356 (440)
+||...|+||++|++.+|+|+.|+++.+++.++|+++++..+. .++++++++. ...+|+ .+.++++++.++++
T Consensus 231 ~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~~~~~v~~~~~~ 306 (364)
T TIGR01892 231 QGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEV----VSTDPGVNTEPDAELVAFLEEL 306 (364)
T ss_pred ecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEE----ccCCCCcCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999987653 4566777665 233333 45578888888654
Q ss_pred HHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 013571 357 GASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAV 427 (440)
Q Consensus 357 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~ 427 (440)
+ |.++ ...+++||++++... +|++. +||+. ...+|++|||++++++.+++++|+.+
T Consensus 307 ~----~~~~----~~~~~~tD~~~~~~~gip~v~--~Gpg~-----~~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 307 S----GNAP----EVVSYGTEAPQFQELGAEAVV--CGPGD-----IRQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred h----CCCC----ceecccccHHHHHhCCCcEEE--ECCCC-----hHhCCCCCceeeHHHHHHHHHHHHHh
Confidence 3 5432 245668999999887 89765 66643 23589999999999999999999876
No 27
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-48 Score=395.25 Aligned_cols=371 Identities=15% Similarity=0.121 Sum_probs=281.7
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHhCCCCCc------chHHHHHHHHHHHHhCCCc-eee--cCCCceEEEEEcCC-CCC
Q 013571 42 RELLDSAREPEFFEWMRRIRRRIHENPELGF------EEYETSQLVRSELDSLGIE-YTW--PVAKTGIVASVGSG-GEP 111 (440)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~------~e~~~~~~l~~~l~~~G~~-~~~--~~~~~nv~~~~~~~-~~~ 111 (440)
+++.++++++. +++++++++|++|||+++ ++.++++||+++|+++||+ ++. ..+++|+++++.++ ++|
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~ 80 (456)
T PRK08201 3 QQVEAYLRERR--EAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKP 80 (456)
T ss_pred hHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 45666777776 899999999999999985 4578899999999999997 443 33567899988543 458
Q ss_pred EEEEEEecccCCCCC---CCCCccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccc
Q 013571 112 WFGLRAEMDALPLQE---MVEWEHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGG 183 (440)
Q Consensus 112 ~i~~~~H~D~vp~~~---~~~~~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G 183 (440)
+|+|+||+||||+++ |...||. .+++|++|||| |||+++++|.|++.|++.+..++++|.|++++|||. +.|
T Consensus 81 ~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g 160 (456)
T PRK08201 81 TVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPN 160 (456)
T ss_pred EEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCcc
Confidence 999999999999875 3444676 46789999999 699999999999999876656788999999999994 568
Q ss_pred hHHHHHcCC--CCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCC--CCCCCCC-CCCHHHHHHHHHHHH
Q 013571 184 AYYMIKEGA--VDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGG--HAAMPQD-TRDPVLAASFAILTL 258 (440)
Q Consensus 184 ~~~l~~~~~--~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~--Hss~p~~-g~nAi~~~~~~i~~l 258 (440)
+..++++.. + ..|++++.++....+... ....++||..+++|+++|+++ |||.|.. +.|||..+++++.+|
T Consensus 161 ~~~~l~~~~~~~-~~d~~ii~e~~~~~~~~~---~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l 236 (456)
T PRK08201 161 LDSFVEEEKDKL-AADVVLISDTTLLGPGKP---AICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASL 236 (456)
T ss_pred HHHHHHhhHHhc-cCCEEEEeCCCcCCCCCE---EEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhc
Confidence 888876532 2 358888877543221111 123456899999999999998 9997654 579999999999999
Q ss_pred HHhhccc-----------------------------------CCC-------------CCCeEEEEEEEecCCc----cc
Q 013571 259 QHIVSRE-----------------------------------TDP-------------LEARVVTVGFIDAGQA----GN 286 (440)
Q Consensus 259 ~~~~~~~-----------------------------------~~~-------------~~~~t~~~~~i~gG~~----~n 286 (440)
+++..+. ... ...+|+|++.|+||.. .|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~N 316 (456)
T PRK08201 237 HDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKT 316 (456)
T ss_pred CCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCce
Confidence 7532100 000 0135899999988754 79
Q ss_pred ccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCC--CcCCCHHHHHHHHHHHHhhcCCC
Q 013571 287 IIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYP--ATVNDEKMYEHGKRVGASMVGEP 364 (440)
Q Consensus 287 ~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~ 364 (440)
+||++|++++|+|+.|+++.+++.++|++++++.. ..+.+++++. ...++ .++.++++++++.+++++.+|.+
T Consensus 317 vVP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~----~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~ 391 (456)
T PRK08201 317 VIPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRR----FDKGPAFVAPIDHPAIQAAARAYEAVYGTE 391 (456)
T ss_pred EECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEE----CCCcCceecCCCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999987532 2334455543 22233 34567899999999999998875
Q ss_pred CcccCCCCcccc---cHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 365 NVHLTPVEMGAE---DFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 365 ~~~~~~~~~g~t---D~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
+.. ...+++ |+.++... +|++. +||+.. ..++|++||||++++|.+++++|.+++.++-
T Consensus 392 ~~~---~~~gg~~~~~~~~~~~~gip~v~--~GpG~~----~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 392 AAF---TRMGGSIPVVETFSSQLHIPIVL--MGFGLP----SENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred cee---cCCCCcHHHHHHHHHHhCCCEEE--ecCCCC----CCCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 532 233444 56666555 88876 555432 1359999999999999999999999999873
No 28
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=6.4e-48 Score=380.30 Aligned_cols=346 Identities=17% Similarity=0.154 Sum_probs=273.5
Q ss_pred HHHHHHHHHHHhCCCCCcchH---HHHHHHHHHHHhCCCceeecC---C-CceEEEEEcCC--CCCEEEEEEecccCCC-
Q 013571 55 EWMRRIRRRIHENPELGFEEY---ETSQLVRSELDSLGIEYTWPV---A-KTGIVASVGSG--GEPWFGLRAEMDALPL- 124 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~---~~~~~l~~~l~~~G~~~~~~~---~-~~nv~~~~~~~--~~~~i~~~~H~D~vp~- 124 (440)
+++++++++|++|||++++|. ++++|+.++|+++|++++... + .+|+++++++. .+|+|+|+||+||||+
T Consensus 11 ~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~ 90 (376)
T PRK07473 11 EAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPV 90 (376)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCC
Confidence 788999999999999999875 667899999999999987632 2 35899998642 3589999999999964
Q ss_pred CCCCCCcccccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEEE
Q 013571 125 QEMVEWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMF 200 (440)
Q Consensus 125 ~~~~~~~~~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~ 200 (440)
+.|..+||. +++|++|||| |||+++++|+|+++|++.+..++.+|.|+|++|||. +.|++.+++++.. ..|+++
T Consensus 91 ~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~i 168 (376)
T PRK07473 91 GTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYVL 168 (376)
T ss_pred CCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEEE
Confidence 445567885 6689999999 799999999999999988766778999999999994 5699999886543 568999
Q ss_pred EeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEE
Q 013571 201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFI 279 (440)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i 279 (440)
+.+++. ..+.+. ..++|..+++|+++|+++|++ .|+.|.|||..+++++.+|+++.. ...++|++.|
T Consensus 169 v~ep~~--~~~~v~----~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~i 236 (376)
T PRK07473 169 VPEPGR--PDNGVV----TGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGIV 236 (376)
T ss_pred EeCCCC--CCCCEE----EECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEeeE
Confidence 877532 222221 235799999999999999986 799999999999999999988742 2368999999
Q ss_pred ecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcC--CC-HHHHHHHHHH
Q 013571 280 DAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATV--ND-EKMYEHGKRV 356 (440)
Q Consensus 280 ~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~ 356 (440)
+||.+.|+||++|+++++.|....+..++..+++.+.++ ...+++++++. ....|+.. .+ +++++.++++
T Consensus 237 ~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~ 309 (376)
T PRK07473 237 HGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG---TEDDVTFTVTR----GVTRPVWEPDAGTMALYEKARAI 309 (376)
T ss_pred EcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---cCCCeEEEEEc----cccCCCCCCChhHHHHHHHHHHH
Confidence 999999999999999999998887777777776665554 23455555543 12233332 23 4688888877
Q ss_pred HHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 357 GASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 357 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
.+.. |.++. ...+.++||++++... +|++. ++||+.. .+|++|||++++++.+++++|++++.++
T Consensus 310 ~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~-g~Gpg~~------~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 310 AGQL-GLSLP--HGSAGGGSDGNFTGAMGIPTLD-GLGVRGA------DYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred HHHc-CCCCc--cccCccccHhhhHHhcCCCEEE-eccCCCC------CCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 7664 77542 3467889999999876 89764 5777643 3899999999999999999999998753
No 29
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3e-48 Score=380.35 Aligned_cols=338 Identities=14% Similarity=0.091 Sum_probs=272.8
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecC--CCceEEEEEcCCCCCEEEEEEecccCCCCCCCCCcc
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV--AKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEH 132 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~--~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~ 132 (440)
+++++++++|++|||+|++|.++++||.++|+++|++++... ...|+++ + ++|+|+|+|||||||.+. .|+
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~---~-~~~~i~l~~H~D~vp~~~---~~~ 74 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV---N-SKAELFVEVHYDTVPVRA---EFF 74 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc---C-CCCEEEEEccccccCCCC---CCE
Confidence 578899999999999999999999999999999999987633 2456665 2 348999999999999743 122
Q ss_pred cccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEEEEeccCCCC
Q 013571 133 KSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVL 208 (440)
Q Consensus 133 ~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~~~~~ 208 (440)
.++|++|||| ||++++++|+|++.|++.. ++++|.|+|++|||. +.|++.++++. ..|++++.+++.
T Consensus 75 --~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~ep~~-- 145 (347)
T PRK08652 75 --VDGVYVYGTGACDAKGGVAAILLALEELGKEF--EDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLEPTD-- 145 (347)
T ss_pred --EECCEEEeccchhhhHHHHHHHHHHHHHhhcc--cCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEecCCC--
Confidence 4579999999 6999999999999998653 567999999999994 56999998752 348888877532
Q ss_pred CCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCccccc
Q 013571 209 PTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNII 288 (440)
Q Consensus 209 ~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~i 288 (440)
+.+ ...++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++........ ..+++++.++||...|+|
T Consensus 146 --~~i----~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~-~~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 146 --LKV----AIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYF-DPHIGIQEIIGGSPEYSI 218 (347)
T ss_pred --Cce----eeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhccc-CCCCcceeeecCCCCCcc
Confidence 122 2346899999999999999999999999999999999999987753221111 135677779999999999
Q ss_pred ccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCccc
Q 013571 289 PEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHL 368 (440)
Q Consensus 289 P~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 368 (440)
|++|++++|+|++|.++.+++.+++++++++ ++++++++. ..+..+.+.++++++.+++++++. |.++.
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~----~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~-- 287 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTE----IWDGFELDEDEEIVQLLEKAMKEV-GLEPE-- 287 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEec----cCCcccCCCCCHHHHHHHHHHHHh-CCCCC--
Confidence 9999999999999999999999999999853 355555432 222223566889999999999998 87553
Q ss_pred CCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 369 TPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 369 ~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
+....++||++++... +|++. +||+.. ..+|++|||++++++.+++++|.+++..+++
T Consensus 288 ~~~~~g~tDa~~~~~~gip~v~--~Gpg~~-----~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 288 FTVMRSWTDAINFRYNGTKTVV--WGPGEL-----DLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred cCcCCccchhHHHHHCCCCEEE--ECCCch-----hhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 3467788999999887 88865 676542 3599999999999999999999999999875
No 30
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=1.3e-47 Score=375.09 Aligned_cols=332 Identities=14% Similarity=0.064 Sum_probs=265.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCCcccc
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKS 134 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~~~ 134 (440)
+++++++++|++|||++++|.++++||.++|+++|++++.+.. .|++. .+ .|+|+|+||+||||.. ++ ..
T Consensus 10 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~-~~~~~--~g--~~~lll~gH~DtVp~~----~~-~~ 79 (346)
T PRK00466 10 QKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILPD-SNSFI--LG--EGDILLASHVDTVPGY----IE-PK 79 (346)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEecC-CCcEe--cC--CCeEEEEeccccCCCC----CC-ce
Confidence 7788999999999999999999999999999999999876543 34543 22 3789999999999941 11 24
Q ss_pred cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEEEEeccCCCCCC
Q 013571 135 KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPT 210 (440)
Q Consensus 135 ~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~ 210 (440)
.++|++|||| |||+++++|+|+++|++.+ .++.|+|++|||+ +.|++.+++++. ++|++++.+| +
T Consensus 80 ~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~ep-----~ 148 (346)
T PRK00466 80 IEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVGEP-----S 148 (346)
T ss_pred eeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEcCC-----C
Confidence 5689999999 6899999999999998875 3589999999995 469999998863 5788887653 2
Q ss_pred CcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCccccccc
Q 013571 211 GTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPE 290 (440)
Q Consensus 211 g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~ 290 (440)
+...+ ...++|..+++|+++|+++|+|.|+ .|||..+++++.+|.+... .....+++++.|+||...|+||+
T Consensus 149 ~~~~i--~~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~NvvP~ 220 (346)
T PRK00466 149 NGTDI--VVEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESYNVTPA 220 (346)
T ss_pred CCCce--EEEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcCcccCC
Confidence 22111 2246899999999999999999885 5999999999999976532 22346899999999999999999
Q ss_pred ceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCC
Q 013571 291 IVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTP 370 (440)
Q Consensus 291 ~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (440)
+|++++|+|+.|+++.+++.+++++.+++ +++++.. ..+....+.++++++.+.+++++. |.++. +.
T Consensus 221 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~~~~----~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~ 287 (346)
T PRK00466 221 KLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLKIVD----ETPPVKVSINNPVVKALMRALLKQ-NIKPR--LV 287 (346)
T ss_pred ceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEeecc----CCCCcccCCCCHHHHHHHHHHHHh-CCCce--EE
Confidence 99999999999999999999999988863 3333221 122223455789999999999986 77543 34
Q ss_pred CCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 371 VEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 371 ~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
..+|+||+++|.+..|.++ .+||+. ...+|++|||++++++.+++++|++++.+++..
T Consensus 288 ~~~g~tD~~~~~~~~~~~v-~fGpg~-----~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 288 RKAGTSDMNILQKITTSIA-TYGPGN-----SMLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred ecCCcCcHHHHHHhCCCEE-EECCCC-----cccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 6688999999988744332 377754 235899999999999999999999999998764
No 31
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=1.6e-47 Score=374.62 Aligned_cols=335 Identities=14% Similarity=0.066 Sum_probs=264.8
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCCccc
Q 013571 54 FEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHK 133 (440)
Q Consensus 54 ~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~~ 133 (440)
.+++++++++|++|||++++|.++++|+.++|+++|++++.+. ..|++++++++ +|+|+|+||+||||.. .|+.
T Consensus 5 ~~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~i~~~~~~-~~~l~~~~H~DtVp~~----~p~~ 78 (348)
T PRK04443 5 ALEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVDE-AGNARGPAGDG-PPLVLLLGHIDTVPGD----IPVR 78 (348)
T ss_pred hHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEcCCC-CCEEEEEeeccccCCC----CCcE
Confidence 3789999999999999999999999999999999999987643 35799998543 4899999999999953 2553
Q ss_pred ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEeccCCCCC
Q 013571 134 SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISPVLP 209 (440)
Q Consensus 134 ~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~~~~~~~ 209 (440)
.++|++|||| |||++++++.|+++| +.+++++|.|++++|||.+ .|...++.++. .+|++++.+|+..
T Consensus 79 -~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~Ept~~-- 150 (348)
T PRK04443 79 -VEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGEPSGW-- 150 (348)
T ss_pred -eeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeCCCCc--
Confidence 4689999999 689999999999998 3468899999999999954 45555555544 5799988774321
Q ss_pred CCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc---cCCCCCCeEEEEEEEecCCccc
Q 013571 210 TGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR---ETDPLEARVVTVGFIDAGQAGN 286 (440)
Q Consensus 210 ~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~---~~~~~~~~t~~~~~i~gG~~~n 286 (440)
+.+ ...++|..+++|+++|+++|||.| |.||+..+++++.+|+++... ........+.|++.|+ ...|
T Consensus 151 -~~i----~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n 221 (348)
T PRK04443 151 -DGI----TLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSD 221 (348)
T ss_pred -cce----eeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCC
Confidence 111 234689999999999999999987 799999999999999886531 1112345678888888 4579
Q ss_pred ccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCc
Q 013571 287 IIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNV 366 (440)
Q Consensus 287 ~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 366 (440)
+||++|++++|+|+.|+++.+++.+++++++. +.++++.. . .+++ ..+.++++++.++++++++++. +.
T Consensus 222 ~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~~~~~~~--~-~~~~-~~~~~~~~~~~l~~~~~~~~~~-~~ 290 (348)
T PRK04443 222 GLTVEAEMTVGLRLPPGLSPEEAREILDALLP------TGTVTFTG--A-VPAY-MVSKRTPLARAFRVAIREAGGT-PR 290 (348)
T ss_pred CCCceEEEEEEEccCCCCCHHHHHHHHHHhCC------CcEEEEec--C-CCce-ecCCCCHHHHHHHHHHHHhcCC-cc
Confidence 99999999999999999999999999999973 23444322 0 1222 3456789999999999998553 32
Q ss_pred ccCCCCcccccHHHHHHH--hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 367 HLTPVEMGAEDFSFYTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 367 ~~~~~~~g~tD~~~~~~~--~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
.....|+||+++|.+. +|++. +||+.. ..+|++||||++++|.+++++|.+++.++
T Consensus 291 --~~~~~g~tD~~~~~~~~gip~v~--~Gpg~~-----~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 291 --LKRKTGTSDMNVVAPAWGCPMVA--YGPGDS-----DLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred --eeccccCCcHHHHhhhcCCCEEE--ECCCCc-----cccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 2356789999999863 78765 676532 35899999999999999999999998754
No 32
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-47 Score=383.06 Aligned_cols=370 Identities=17% Similarity=0.120 Sum_probs=282.0
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcc------hHHHHHHHHHHHHhCCC-ceeec--CCCceEEEEEcCC-CC
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFE------EYETSQLVRSELDSLGI-EYTWP--VAKTGIVASVGSG-GE 110 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~------e~~~~~~l~~~l~~~G~-~~~~~--~~~~nv~~~~~~~-~~ 110 (440)
..++.++++++. +++++++++|++|||++++ +.++++||.++|+++|| +++.. ++++|++++++++ ++
T Consensus 6 ~~~~~~~i~~~~--~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~ 83 (449)
T PRK07907 6 ADDLRARVAELL--PRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGA 83 (449)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCC
Confidence 456777888877 9999999999999999963 57899999999999998 67652 4678999999765 35
Q ss_pred CEEEEEEecccCCCCCC---CCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-cc
Q 013571 111 PWFGLRAEMDALPLQEM---VEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YG 182 (440)
Q Consensus 111 ~~i~~~~H~D~vp~~~~---~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~ 182 (440)
|+|+|+||+||||+++. ...||.. ++||+||||| |||+++++|.|+++| +.+++++|.|++++|||. +.
T Consensus 84 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~ 160 (449)
T PRK07907 84 PTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSP 160 (449)
T ss_pred CEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCc
Confidence 89999999999998754 4446763 5689999999 689999999999998 335778999999999994 57
Q ss_pred chHHHHHcCC-CCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEE--ecCCCCCCC-CCCCCHHHHHHHHHHHH
Q 013571 183 GAYYMIKEGA-VDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIK--GKGGHAAMP-QDTRDPVLAASFAILTL 258 (440)
Q Consensus 183 G~~~l~~~~~-~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~--G~~~Hss~p-~~g~nAi~~~~~~i~~l 258 (440)
|+++++++.. .-+.|++++.+++... .+.-.+ ...+||..+++++++ |+++|+|.| ..+.||+..+++++.+|
T Consensus 161 g~~~~l~~~~~~~~~d~~iv~E~~~~~-~~~p~i--~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l 237 (449)
T PRK07907 161 SLERLLAEHPDLLAADVIVIADSGNWS-VGVPAL--TTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATL 237 (449)
T ss_pred cHHHHHHhchHhhcCCEEEEecCCcCC-CCCeEE--EEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhh
Confidence 9999987632 1246888887753211 111111 234689999999998 889999974 56899999999999999
Q ss_pred HHhhccc-------CCC---------------------------------CCCeEEEEEEEec---CCcccccccceEEE
Q 013571 259 QHIVSRE-------TDP---------------------------------LEARVVTVGFIDA---GQAGNIIPEIVRFG 295 (440)
Q Consensus 259 ~~~~~~~-------~~~---------------------------------~~~~t~~~~~i~g---G~~~n~iP~~a~~~ 295 (440)
++...+. ..+ ...++++++.|++ |.+.|+||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~ 317 (449)
T PRK07907 238 HDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARAR 317 (449)
T ss_pred CCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEE
Confidence 7642110 000 1246888998886 46889999999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCC--CcCCCHHHHHHHHHHHHhhcCCCCcccCCCCc
Q 013571 296 GTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYP--ATVNDEKMYEHGKRVGASMVGEPNVHLTPVEM 373 (440)
Q Consensus 296 ~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 373 (440)
+|+|+.|+++.+++.+.|++++++. ..++.++++++. ..++ .++.++++++.+++++++.+|.++.. ...+
T Consensus 318 ~diR~~p~~~~e~v~~~l~~~l~~~-~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~~--~~~~ 390 (449)
T PRK07907 318 LSLRVAPGQDAAEAQDALVAHLEAH-APWGAHVTVERG----DAGQPFAADASGPAYDAARAAMREAWGKDPVD--MGMG 390 (449)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHhc-CCCCcEEEEEEC----CCcCceeCCCCCHHHHHHHHHHHHHhCCCcee--cCCC
Confidence 9999999999999999999998763 123456666652 2223 34567999999999999999886532 2344
Q ss_pred cccc-HHHHHHH---hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 374 GAED-FSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 374 g~tD-~~~~~~~---~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
|+++ .+.|.+. +|++. +||++.. .++|++||||+++++.+++++|++++..|
T Consensus 391 g~~~~~~~~~~~~~~~~~v~--~Gpg~~~----~~aH~~nE~i~i~~l~~~~~~~~~~l~~~ 446 (449)
T PRK07907 391 GSIPFIAELQEAFPQAEILV--TGVEDPK----TRAHSPNESVHLGELERAAVAEALLLARL 446 (449)
T ss_pred CcHHHHHHHHHhcCCCcEEE--eccCCCC----CCCcCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 4444 2344443 34433 6765421 35999999999999999999999999887
No 33
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=5.9e-47 Score=384.22 Aligned_cols=375 Identities=15% Similarity=0.127 Sum_probs=283.0
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcch------HHHHHHHHHHHHhCCCceee--cCCCceEEEEEcCC--CC
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEE------YETSQLVRSELDSLGIEYTW--PVAKTGIVASVGSG--GE 110 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e------~~~~~~l~~~l~~~G~~~~~--~~~~~nv~~~~~~~--~~ 110 (440)
..++.++++.+. +++++++++|++|||+|+++ .++++||.++|+++|++++. ..+++|++++++++ .+
T Consensus 5 ~~~~~~~~~~~~--~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~ 82 (464)
T PRK09104 5 LDPVLDHIDANL--DASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDA 82 (464)
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 345777888877 99999999999999999754 67899999999999998865 34568999999753 35
Q ss_pred CEEEEEEecccCCCCCCCCC---cccc-cCCC-----cccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccC
Q 013571 111 PWFGLRAEMDALPLQEMVEW---EHKS-KNNG-----KMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGE 178 (440)
Q Consensus 111 ~~i~~~~H~D~vp~~~~~~~---~~~~-~~~g-----~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dE 178 (440)
|+|+|+||+||||+++...| ||.. .++| ++|||| |||+++++|.|+++|++.+..++++|.|+|++||
T Consensus 83 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dE 162 (464)
T PRK09104 83 PHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEE 162 (464)
T ss_pred CEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECcc
Confidence 99999999999998764445 6663 3343 599999 6899999999999999877678889999999999
Q ss_pred Cc-ccchHHHHHcCC-CCCCCEEEEeccCCCCC-CCcccccCCCcccceeEEEEEEEe--cCCCCCC-CCCCCCHHHHHH
Q 013571 179 EG-YGGAYYMIKEGA-VDKFQGMFGIHISPVLP-TGTVGSRPGPLLAGSGRFTAVIKG--KGGHAAM-PQDTRDPVLAAS 252 (440)
Q Consensus 179 E~-~~G~~~l~~~~~-~~~~d~~~~~~~~~~~~-~g~~~~~~g~~~~g~~~~~i~v~G--~~~Hss~-p~~g~nAi~~~~ 252 (440)
|. +.|...++++.. .-..|++++.++....+ ...+ ..++||..+++|+++| +++|||. |+.|.||+..++
T Consensus 163 E~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i----~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~ 238 (464)
T PRK09104 163 ESGSPSLVPFLEANAEELKADVALVCDTGMWDRETPAI----TTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLT 238 (464)
T ss_pred ccCCccHHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEE----EeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHH
Confidence 94 467777766432 11468888877432111 1112 2356899999999999 6899996 678999999999
Q ss_pred HHHHHHHHhhccc------------------------------------CCC------------CCCeEEEEEEEecCC-
Q 013571 253 FAILTLQHIVSRE------------------------------------TDP------------LEARVVTVGFIDAGQ- 283 (440)
Q Consensus 253 ~~i~~l~~~~~~~------------------------------------~~~------------~~~~t~~~~~i~gG~- 283 (440)
+++.+|++...+. ..+ ...+++|++.|+||.
T Consensus 239 ~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~ 318 (464)
T PRK09104 239 RILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYT 318 (464)
T ss_pred HHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCC
Confidence 9999986531100 000 114689999999985
Q ss_pred ---cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhh
Q 013571 284 ---AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASM 360 (440)
Q Consensus 284 ---~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (440)
..|+||++|++++|+|++|+++.+++.++|++++++.. ..+.++++.... ..+...++.++++++.+.+++++.
T Consensus 319 ~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~ 395 (464)
T PRK09104 319 GEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHDHG--GSPAIALPYDSPALAAAKAALSDE 395 (464)
T ss_pred CCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEecC--CCCceECCCCCHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999987521 123344443311 122223567899999999999998
Q ss_pred cCCCCcccCCCCcccc-cHHHHHH-H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 361 VGEPNVHLTPVEMGAE-DFSFYTQ-R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 361 ~g~~~~~~~~~~~g~t-D~~~~~~-~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
+|.++.. ...+|++ |++.|.. . +|++.+++|+.. ..+|++||||++++|.+++++|.+++..++
T Consensus 396 ~~~~~~~--~~~~g~~~~~~~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 396 WGKPAVL--IGSGGSIPIVGDFKRILGMDSLLVGFGLDD------DRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred hCCCcee--cCCCCcHHHHHHHHHHhCCCEEEecCCCCC------CCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 8875532 2344443 3566655 3 787764444322 349999999999999999999999999886
No 34
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=8.5e-47 Score=370.69 Aligned_cols=333 Identities=17% Similarity=0.165 Sum_probs=264.8
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCceeecCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCCccc
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSL-GIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHK 133 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~-G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~~ 133 (440)
+++++++++|++|||+|++|.++++||.++|+++ |+++... ++|++++++++.+++|+|+||+||||+++ .+++.
T Consensus 7 ~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~~~ 82 (352)
T PRK13007 7 ADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLPSR 82 (352)
T ss_pred HHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC--CCCcc
Confidence 8899999999999999999999999999999996 8887643 46899999655446899999999999864 24433
Q ss_pred ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc---cchHHHHHcC-CCCCCCEEEEeccCC
Q 013571 134 SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY---GGAYYMIKEG-AVDKFQGMFGIHISP 206 (440)
Q Consensus 134 ~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~---~G~~~l~~~~-~~~~~d~~~~~~~~~ 206 (440)
.++|++|||| ||+++|++|.|+++|. +++++|.|+|++|||.+ .|+..+++.. .+.++|++++.++..
T Consensus 83 -~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep~~ 157 (352)
T PRK13007 83 -REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLEPTD 157 (352)
T ss_pred -eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEecCCC
Confidence 5689999999 4899999999999993 37789999999999954 4888887653 233579999877532
Q ss_pred CCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC---CCCCeEEEEEEEecCC
Q 013571 207 VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETD---PLEARVVTVGFIDAGQ 283 (440)
Q Consensus 207 ~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~---~~~~~t~~~~~i~gG~ 283 (440)
+.+ ...++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..+... .....+++++.|+||.
T Consensus 158 ----~~i----~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG~ 229 (352)
T PRK13007 158 ----GVI----EAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGGV 229 (352)
T ss_pred ----Cce----EeeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecCC
Confidence 222 23357999999999999999999999999999999999999886533211 1123588999999999
Q ss_pred cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCC
Q 013571 284 AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGE 363 (440)
Q Consensus 284 ~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (440)
..|+||++|++++|+|++|+++.+++.++++++++.. + ++++.. . ..++ ..+.++++++.+.+++ |.
T Consensus 230 ~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~----~-~~~~~~--~-~~~~-~~~~~~~~~~~~~~~~----g~ 296 (352)
T PRK13007 230 AGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGF----A-EVEVTD--L-APGA-RPGLDHPAAAALVAAV----GG 296 (352)
T ss_pred cCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhccc----c-EEEeec--c-cCCC-CCCCCCHHHHHHHHHh----CC
Confidence 9999999999999999999999999999999988642 1 344322 1 2222 2345788888887753 54
Q ss_pred CCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013571 364 PNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVA 428 (440)
Q Consensus 364 ~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~ 428 (440)
++ ....|+||++++... +|++. +||+.. ..+|++|||++++++.+++++|+.++
T Consensus 297 ~~----~~~~g~td~~~~~~~Gip~v~--~Gpg~~-----~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 297 EV----RAKYGWTDVARFSALGIPAVN--FGPGDP-----ALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred CC----ccccccchHHHHHhCCCCEEE--eCCCch-----hhccCCCCceEHHHHHHHHHHHHHHh
Confidence 33 245678999999887 89776 676432 35999999999999999999999875
No 35
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=1.6e-46 Score=370.30 Aligned_cols=333 Identities=16% Similarity=0.131 Sum_probs=252.0
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHhCCCc-eeecCCCceEEEEEcCCCCCEEEEEEecccCCCCCC--CCC---cc-
Q 013571 60 IRRRIHENPELGFEEYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEM--VEW---EH- 132 (440)
Q Consensus 60 ~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~--~~~---~~- 132 (440)
++++|++|||++++|.++++||.++|+++|++ ++....+.|++++++++++|+|+|+|||||||+++. ..| ||
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 37899999999999999999999999999653 222222458999986544689999999999998642 234 22
Q ss_pred --------cccCCCcccccc---hhHHHHHHHHHHHHHHh--cccCCCceEEEEEeccCCcc---cchHHHHHcCC-CCC
Q 013571 133 --------KSKNNGKMHGCG---HDVHTTILLGAARLLKH--RMDRLKGTVKLVFQPGEEGY---GGAYYMIKEGA-VDK 195 (440)
Q Consensus 133 --------~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~--~~~~~~~~v~~~~~~dEE~~---~G~~~l~~~~~-~~~ 195 (440)
..+++|++|||| ||++++++|+|+++|++ .+..++++|.|+|++|||.+ .|+..++++.. +..
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 245689999999 58999999999999953 34567899999999999953 48999987642 235
Q ss_pred CCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC--CC-CCCe
Q 013571 196 FQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET--DP-LEAR 272 (440)
Q Consensus 196 ~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~--~~-~~~~ 272 (440)
.|++++.+++.. .+ ...++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+++..... +. ....
T Consensus 161 ~d~~iv~Ept~~----~i----~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIGEPTGG----GI----EAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEECCCCC----cc----cccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 788888764321 11 2346899999999999999999999999999999999999988643221 11 1246
Q ss_pred EEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHH--------HHHH---cC-CeEEEEEeccccCCC
Q 013571 273 VVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEM--------QAAV---HQ-CSATIDFLEEKMRHY 340 (440)
Q Consensus 273 t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~--------~~~~---~~-~~~~~~~~~~~~~~~ 340 (440)
++|++.|+||.+.|+||++|++++|+|+.|+++.+++.++|+++++. ..+. .+ ..++++... ..+.
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 310 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMED--EAGG 310 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEcc--cCCC
Confidence 89999999999999999999999999999999999999999766432 2211 11 133443310 1111
Q ss_pred CCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCC
Q 013571 341 PATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVD 413 (440)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~ 413 (440)
...+.++++++.+.+++++++|.++. ...|+||+++|... +|++. +||++ ..++|++||||+
T Consensus 311 ~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~--~Gpg~-----~~~aH~~dE~v~ 373 (373)
T TIGR01900 311 ALPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALN--FGAGD-----PLFAHKHDEQCP 373 (373)
T ss_pred CCCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEE--eCCCC-----hhhccCCCCCCC
Confidence 12244788999999999998777542 36688999999876 88876 77754 346999999985
No 36
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-47 Score=380.79 Aligned_cols=358 Identities=15% Similarity=0.126 Sum_probs=265.9
Q ss_pred HHHHHHHHhCCCCC------cchHHHHHHHHHHHHhCCCceeec---CCCceEEEEEcCC-C-CCEEEEEEecccCCCCC
Q 013571 58 RRIRRRIHENPELG------FEEYETSQLVRSELDSLGIEYTWP---VAKTGIVASVGSG-G-EPWFGLRAEMDALPLQE 126 (440)
Q Consensus 58 ~~~~~~l~~~ps~s------~~e~~~~~~l~~~l~~~G~~~~~~---~~~~nv~~~~~~~-~-~~~i~~~~H~D~vp~~~ 126 (440)
++++++|++|||++ .+|.++++||.++|+++|++++.. +++.|++++++++ + .|+|+|++|+||||+++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 57899999999998 678999999999999999998763 3568999999654 3 47999999999999854
Q ss_pred --CCCCccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcC--CCCCC
Q 013571 127 --MVEWEHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEG--AVDKF 196 (440)
Q Consensus 127 --~~~~~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~--~~~~~ 196 (440)
|...||. .++||++|||| ||++++++|+|+++|++.+..++++|.|+|++|||++ .|++.++++. .+...
T Consensus 82 ~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~~ 161 (426)
T PRK07906 82 ADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEGV 161 (426)
T ss_pred ccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccch
Confidence 3344676 45789999999 5899999999999999988889999999999999964 4899887753 12223
Q ss_pred CEEEEeccCCC---CCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc--------
Q 013571 197 QGMFGIHISPV---LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-------- 265 (440)
Q Consensus 197 d~~~~~~~~~~---~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~-------- 265 (440)
+++ +.+++.. .+.+.........++|..+++|+++|+++|+|+|+ +.|||..+++++.+|+++..+.
T Consensus 162 ~~i-i~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~-~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 239 (426)
T PRK07906 162 TEA-ISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVN-DDNAVTRLAEAVARIGRHRWPLVLTPTVRA 239 (426)
T ss_pred heE-EECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHhCCCCcccCHHHHH
Confidence 333 3332210 01110001123456899999999999999999996 4999999999999997542110
Q ss_pred ------------CCCC-------------------CCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHH
Q 013571 266 ------------TDPL-------------------EARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIK 314 (440)
Q Consensus 266 ------------~~~~-------------------~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~ 314 (440)
.++. ..+|+|++.|+||.+.|+||++|++++|+|+.|+++ +++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i~ 318 (426)
T PRK07906 240 FLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATVD 318 (426)
T ss_pred HHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHHH
Confidence 0000 146999999999999999999999999999999886 56666666
Q ss_pred HHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEc
Q 013571 315 EVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVG 393 (440)
Q Consensus 315 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G 393 (440)
+++. ..+++++.. ..+...++.++++++.+++++++.++.... .+....|+||++++... +|++. +|
T Consensus 319 ~~~~-------~~v~~~~~~--~~~~~~~~~~~~~v~~l~~a~~~~~~~~~~-~~~~~~ggtDa~~~~~~g~p~~~--~g 386 (426)
T PRK07906 319 ELLG-------PDVEREWVH--RDPALETPFDGPLVDAMNAALLAEDPGARV-VPYMLSGGTDAKAFSRLGIRCYG--FA 386 (426)
T ss_pred HHhC-------CCeEEEEec--CCCCCCCCCCcHHHHHHHHHHHHHCCCCeE-eeeeecccCcHHHHHhcCCceEE--Ee
Confidence 6542 235555421 122223456889999999999988532221 23456788999999877 77654 56
Q ss_pred cCCCCCC--CCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013571 394 TRNETLK--PFIRLHSPYLVVDEDALPIGAALHAAVAIS 430 (440)
Q Consensus 394 ~~~~~~g--~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~ 430 (440)
|.....+ ....+|++||+++++++.+++++|+.++.+
T Consensus 387 p~~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 387 PLRLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred ccccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 5421000 013589999999999999999999999875
No 37
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-46 Score=377.80 Aligned_cols=373 Identities=14% Similarity=0.048 Sum_probs=278.2
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcc---hHHHHHHHH----HHHHhCCCceeec-----CCCceEEEEEcCC
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFE---EYETSQLVR----SELDSLGIEYTWP-----VAKTGIVASVGSG 108 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~---e~~~~~~l~----~~l~~~G~~~~~~-----~~~~nv~~~~~~~ 108 (440)
..++.++++. +++++++++|++|||+|++ +.++++|+. ++|+++||+++.. .+++|++++++++
T Consensus 7 ~~~~~~~~~~----~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~ 82 (469)
T PRK07079 7 IARAAAYFDS----GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIED 82 (469)
T ss_pred HHHHHHhhcc----HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCC
Confidence 3445555553 5799999999999999974 346676664 5899999998752 2468999998654
Q ss_pred -CCCEEEEEEecccCCCCC--CC--CCccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhc-ccCCCceEEEEEeccC
Q 013571 109 -GEPWFGLRAEMDALPLQE--MV--EWEHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHR-MDRLKGTVKLVFQPGE 178 (440)
Q Consensus 109 -~~~~i~~~~H~D~vp~~~--~~--~~~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~-~~~~~~~v~~~~~~dE 178 (440)
++|+|+|+||+||||+++ |+ ..||. .++||++|||| |||+++++|+|+++|.+. +.+++++|.|++++||
T Consensus 83 ~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dE 162 (469)
T PRK07079 83 DALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGE 162 (469)
T ss_pred CCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECcc
Confidence 458999999999999754 44 26777 46789999999 699999999999998653 4678899999999999
Q ss_pred Cc-ccchHHHHHcCC-CCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEec--CCCCCCCCCC--CCHHHHHH
Q 013571 179 EG-YGGAYYMIKEGA-VDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGK--GGHAAMPQDT--RDPVLAAS 252 (440)
Q Consensus 179 E~-~~G~~~l~~~~~-~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~--~~Hss~p~~g--~nAi~~~~ 252 (440)
|+ +.|+..++++.. .-..|++++.++....+.. .. ....+||..+++|+++|+ +.||+ ++.| .||+..++
T Consensus 163 E~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~~~-~~--i~~g~kG~~~~~v~v~G~~~~~hs~-~~~g~~~nai~~l~ 238 (469)
T PRK07079 163 EIGSPGLAEVCRQHREALAADVLIASDGPRLSAER-PT--LFLGSRGAVNFRLRVNLRDGAHHSG-NWGGLLRNPGTVLA 238 (469)
T ss_pred ccCCccHHHHHHHhHHhcCCCEEEEeCCCccCCCC-eE--EEEecceEEEEEEEEeeCCCCCCCC-ccccccCCHHHHHH
Confidence 94 569999988642 1146888887643211111 11 123468999999999998 44666 3444 79999999
Q ss_pred HHHHHHHHhhccc----------------------CC----------------------CCCCeEEEEEEEecCC---cc
Q 013571 253 FAILTLQHIVSRE----------------------TD----------------------PLEARVVTVGFIDAGQ---AG 285 (440)
Q Consensus 253 ~~i~~l~~~~~~~----------------------~~----------------------~~~~~t~~~~~i~gG~---~~ 285 (440)
+++.++.+...+. .. ....+|+|++.|+||. ..
T Consensus 239 ~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~ 318 (469)
T PRK07079 239 HAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPV 318 (469)
T ss_pred HHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcc
Confidence 9999985421000 00 0123589999999994 68
Q ss_pred cccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCC--cCCCHHHHHHHHHHHHhhcCC
Q 013571 286 NIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA--TVNDEKMYEHGKRVGASMVGE 363 (440)
Q Consensus 286 n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~ 363 (440)
|+||++|++++|+|++|+++.+++.++|++++++.. ...+++++. ..+++ .+.++++++.+.+++++.+|.
T Consensus 319 NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~---~~~v~~~~~----~~~~p~~~~~~~~~v~~l~~a~~~~~g~ 391 (469)
T PRK07079 319 NAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHG---FPMVEVTVE----RGSPATRLDPDDPWVRWALASIARTTGK 391 (469)
T ss_pred eEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC---CCCeEEEEe----CCCCceecCCCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999987531 113555552 23333 456889999999999998887
Q ss_pred CCcccCCCCcccccHHHHHH-H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhccc
Q 013571 364 PNVHLTPVEMGAEDFSFYTQ-R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNL 435 (440)
Q Consensus 364 ~~~~~~~~~~g~tD~~~~~~-~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~ 435 (440)
++... ....|++|+++|.. . +|+++ +|+.... ..+|++||||+++++.+++++|.+++.++++.+
T Consensus 392 ~~~~~-~~~~g~~d~~~~~~~~giP~v~--~g~~~~~----~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~~ 458 (469)
T PRK07079 392 KPALL-PNLGGSLPNDVFADILGLPTLW--VPHSYPA----CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQG 458 (469)
T ss_pred CCcee-cCCCcchhHHHHHHHhCCCEEE--ecCCCCC----ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 54321 34566779988886 4 89874 3433221 137999999999999999999999999997654
No 38
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=2e-46 Score=369.24 Aligned_cols=340 Identities=16% Similarity=0.154 Sum_probs=275.7
Q ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecC------CCceEEEEEcCC-CCCEEEEEEecccCCCCCCCC
Q 013571 57 MRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV------AKTGIVASVGSG-GEPWFGLRAEMDALPLQEMVE 129 (440)
Q Consensus 57 ~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nv~~~~~~~-~~~~i~~~~H~D~vp~~~~~~ 129 (440)
+++++++|++|||++++|.++++||.++|+++|++++... .++|++++++++ ++|+|+|.||+||||+++.
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~~-- 79 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGAG-- 79 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCCC--
Confidence 5788999999999999999999999999999999987532 378999999765 3489999999999997542
Q ss_pred CcccccCCCcccccch-------hHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEE
Q 013571 130 WEHKSKNNGKMHGCGH-------DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFG 201 (440)
Q Consensus 130 ~~~~~~~~g~i~GrG~-------k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~ 201 (440)
|. ...++|++||||. |++++++|++++.|++.+ .++++|.|+|++|||.+ .|++.+.+.+. ..++.+.
T Consensus 80 ~~-~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~ 155 (361)
T TIGR01883 80 PE-PVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYC 155 (361)
T ss_pred CC-ceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEE
Confidence 21 2356789999883 599999999999998875 57889999999999954 58888866432 3566666
Q ss_pred eccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEe
Q 013571 202 IHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFID 280 (440)
Q Consensus 202 ~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~ 280 (440)
.++. .+.+.+.. .++|..+++++++|+++|++ .|+.|+||+..+++++.+|+... . ....+++++.++
T Consensus 156 ~~~~--~~~~~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~---~--~~~~~~~i~~i~ 224 (361)
T TIGR01883 156 LDAP--GEVGNIQL----AAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR---I--DEETTANIGSFS 224 (361)
T ss_pred EeCC--CCcceEEe----cCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC---C--CCccccccceee
Confidence 6532 22233322 34789999999999999985 79999999999999999986431 1 124678999999
Q ss_pred cCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCc--CCCHHHHHHHHHHHH
Q 013571 281 AGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPAT--VNDEKMYEHGKRVGA 358 (440)
Q Consensus 281 gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 358 (440)
||...|+||++|++.+|+|..|..+.+++.+++++.++..+..++.++++++ ...+++. +.++++++.++++++
T Consensus 225 gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~lv~~l~~a~~ 300 (361)
T TIGR01883 225 GGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEET----RLIYEGFKIHPQHPLMNIFKKAAK 300 (361)
T ss_pred cCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEE----EeccccccCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988888888887765 2233343 557899999999998
Q ss_pred hhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013571 359 SMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVA 428 (440)
Q Consensus 359 ~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~ 428 (440)
+. |.++. .....|+||++++... +|++. +||+.. .+|++||+++++++..++++|..++
T Consensus 301 ~~-g~~~~--~~~~~g~tD~~~~~~~giP~v~--~G~g~~------~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 301 KI-GLKTS--EIFSGGGSDANVLNEKGVPTVN--LSAGYV------HAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred Hc-CCCcE--EEecCcccHHHHHhhCCCceEE--ECCCcc------cCcCcceeEEHHHHHHHHHHHHHHh
Confidence 85 87553 2466789999999977 99877 455432 4999999999999999999999876
No 39
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.4e-46 Score=366.00 Aligned_cols=336 Identities=15% Similarity=0.101 Sum_probs=256.2
Q ss_pred HHHHHHHHHHHhCCCCC----cchHHHHHHHHHHHHhCCCceeec---CCCceEEEEEcCCCCCEEEEEEecccCCCCC-
Q 013571 55 EWMRRIRRRIHENPELG----FEEYETSQLVRSELDSLGIEYTWP---VAKTGIVASVGSGGEPWFGLRAEMDALPLQE- 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s----~~e~~~~~~l~~~l~~~G~~~~~~---~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~- 126 (440)
+++++++++|++|||.+ .+|.++++|+.++|+ |++++.. .++.|+++.. + +|+|+|+||+||||+++
T Consensus 6 ~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~-g--~~~lll~gH~DtVp~~~~ 80 (364)
T PRK08737 6 ESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVR-G--TPKYLFNVHLDTVPDSPH 80 (364)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEc-C--CCeEEEEeeeCCCCCCCC
Confidence 77899999999999985 346899999999997 9987653 3457899864 2 27899999999999864
Q ss_pred CCCCccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcCCCCCCCEEE
Q 013571 127 MVEWEHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAVDKFQGMF 200 (440)
Q Consensus 127 ~~~~~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~~~~~~d~~~ 200 (440)
|...||. .+++|++|||| ||++++++|.|++. +.++|.|+|++|||.+ .|++.+++.+. +.|+++
T Consensus 81 w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~~i 151 (364)
T PRK08737 81 WSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYEAVL 151 (364)
T ss_pred CCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCCEEE
Confidence 3445676 46689999999 58999999999863 3568999999999954 48888888764 578888
Q ss_pred EeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCC-CCCCCHHHHHHHHHHHHHHhhcc----cCCCCCCeEEE
Q 013571 201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMP-QDTRDPVLAASFAILTLQHIVSR----ETDPLEARVVT 275 (440)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p-~~g~nAi~~~~~~i~~l~~~~~~----~~~~~~~~t~~ 275 (440)
+.+|+ +.. ....++|..+++|+++|+++|+|.| +.|+|||..+++++.++.+.... ..+.....++|
T Consensus 152 v~Ept-----~~~---~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~ 223 (364)
T PRK08737 152 VAEPT-----MSE---AVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLRFN 223 (364)
T ss_pred EcCCC-----Cce---eEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCceE
Confidence 86643 211 1245689999999999999999998 58999999999999887654311 12223456999
Q ss_pred EEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCC-CHHHHHHHH
Q 013571 276 VGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVN-DEKMYEHGK 354 (440)
Q Consensus 276 ~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 354 (440)
++.|+||.+.|+||++|++++|+|+.|+++.+++.++|+++++. ...++++.+. ...+++... .+++++.+.
T Consensus 224 vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 296 (364)
T PRK08737 224 IGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEP----AAATFEETFR---GPSLPSGDIARAEERRLAA 296 (364)
T ss_pred EeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHH----cCCceEEEec---cCCCCCcccCcchHHHHHH
Confidence 99999999999999999999999999999999999999877753 1233443331 223444322 235565543
Q ss_pred HHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013571 355 RVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAI 429 (440)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~ 429 (440)
..+.+..|.+. .....++||++++... +|++. +||+. ...+|++||||++++|.+++++|.+++.
T Consensus 297 ~~~~~~~~~~~---~~~~~~~tDa~~~~~~Gip~v~--~GpG~-----~~~aHt~dE~i~i~~l~~~~~~~~~~~~ 362 (364)
T PRK08737 297 RDVADALDLPI---GNAVDFWTEASLFSAAGYTALV--YGPGD-----IAQAHTADEFVTLDQLQRYAESVHRIIN 362 (364)
T ss_pred HHHHhhhcCCC---CceeccccCHHHHHHcCCCEEE--ECCCC-----hhhccCCCcceeHHHHHHHHHHHHHHhc
Confidence 34433336533 2345678999999877 89876 67653 2459999999999999999999999875
No 40
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=2.5e-46 Score=378.39 Aligned_cols=361 Identities=13% Similarity=0.052 Sum_probs=269.4
Q ss_pred HHHhcCCcchHHHHHHHHHHHHhCCCCCc------------chHHHHHHHHHHHHhCCCceeecCCCceEEEEEc-CCCC
Q 013571 44 LLDSAREPEFFEWMRRIRRRIHENPELGF------------EEYETSQLVRSELDSLGIEYTWPVAKTGIVASVG-SGGE 110 (440)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~~ps~s~------------~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~-~~~~ 110 (440)
+.+++++++ +++++++++|++|||++. ++.++++++.++|+++||+++..+ |.++.+. ++++
T Consensus 4 ~~~~i~~~~--~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~ 78 (466)
T TIGR01886 4 FKEEVEARK--DALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGD 78 (466)
T ss_pred HHHHHHHhH--HHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCC
Confidence 445566666 899999999999999964 346688899999999999987532 3344432 2345
Q ss_pred CEEEEEEecccCCCCC-CCCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccch
Q 013571 111 PWFGLRAEMDALPLQE-MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGA 184 (440)
Q Consensus 111 ~~i~~~~H~D~vp~~~-~~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~ 184 (440)
|+|+|+||+||||+++ |...||.. .+||++|||| |||+++++|.|+++|++.+..++++|.|++++|||. +.|+
T Consensus 79 ~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~ 158 (466)
T TIGR01886 79 ERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDM 158 (466)
T ss_pred CEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccH
Confidence 8999999999999864 55567874 6789999999 689999999999999999888899999999999995 4699
Q ss_pred HHHHHcCCCCCCCEEEEeccCC----CCCCCccc----------------------------------cc----------
Q 013571 185 YYMIKEGAVDKFQGMFGIHISP----VLPTGTVG----------------------------------SR---------- 216 (440)
Q Consensus 185 ~~l~~~~~~~~~d~~~~~~~~~----~~~~g~~~----------------------------------~~---------- 216 (440)
.++++++. .+|++++.+.+. +++ |... +.
T Consensus 159 ~~~~~~~~--~~d~~~~~d~~~~~~~ge~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~ 235 (466)
T TIGR01886 159 DYYFKHEE--TPDFGFSPDAEFPIINGEK-GNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAA 235 (466)
T ss_pred HHHHhcCc--CCCEEEECCCCceeEEEec-ceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHH
Confidence 99988754 256654432110 000 0000 00
Q ss_pred --CCCccccee---------EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHH-------------HHhhc---------
Q 013571 217 --PGPLLAGSG---------RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTL-------------QHIVS--------- 263 (440)
Q Consensus 217 --~g~~~~g~~---------~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l-------------~~~~~--------- 263 (440)
.-..++|.. |++|+++|+++|+|+|+.|+|||..|++++.++ .++..
T Consensus 236 ~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 315 (466)
T TIGR01886 236 YESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLG 315 (466)
T ss_pred HHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCC
Confidence 001234433 789999999999999999999999999988873 22210
Q ss_pred --ccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCC
Q 013571 264 --RETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYP 341 (440)
Q Consensus 264 --~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 341 (440)
......+.+|+|++.|+||.. | ++|++.+|+|++|+++.+++.++|++.++. ..++++.. ....++
T Consensus 316 ~~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~~~~--~~~~P~- 383 (466)
T TIGR01886 316 IAFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVTYNG--HFEEPH- 383 (466)
T ss_pred CcccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEEEec--ccCCCc-
Confidence 011124578999999999965 4 799999999999999999999999998863 22333311 001222
Q ss_pred CcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 013571 342 ATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGA 421 (440)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~ 421 (440)
..+.++++++.+.+++++++|.++. +...+|+||+++|...+|.+. +||+ ++.++|++||||+++++.+++
T Consensus 384 ~~~~ds~lv~~l~~a~~~v~G~~~~--~~~~~ggTDa~~~~~~i~~gv--~gPG-----~~~~aH~~dE~V~i~el~~a~ 454 (466)
T TIGR01886 384 YVPGSDPLVQTLLKVYEKHTGKKGH--EVIIGGGTYGRLLERGVAYGA--MFEG-----GPDVMHQANEFMMLDDLILAA 454 (466)
T ss_pred ccCCCCHHHHHHHHHHHHHhCCCCc--eeeecCccHHHhccccccccc--ccCC-----CCCCccCCCcceEHHHHHHHH
Confidence 2455789999999999999887542 246889999999985465433 4554 345699999999999999999
Q ss_pred HHHHHHHHHHhc
Q 013571 422 ALHAAVAISYLD 433 (440)
Q Consensus 422 ~~~~~~~~~~~~ 433 (440)
++|++++.+|+.
T Consensus 455 ~iy~~~i~~l~~ 466 (466)
T TIGR01886 455 AIYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHHhC
Confidence 999999999863
No 41
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=1.1e-45 Score=368.96 Aligned_cols=349 Identities=14% Similarity=0.106 Sum_probs=271.1
Q ss_pred HHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-CC-CEEEEEEecccCCC
Q 013571 57 MRRIRRRIHENPELGF----------EEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GE-PWFGLRAEMDALPL 124 (440)
Q Consensus 57 ~~~~~~~l~~~ps~s~----------~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~~-~~i~~~~H~D~vp~ 124 (440)
+++.+.++++|||+|. ++.++++||.++|+++|++....++.+||+++++++ ++ |+|+|+||+||||+
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~ 82 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDV 82 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCc
Confidence 4566889999999997 467899999999999999654455778999999764 44 89999999999998
Q ss_pred CCC--CCC---cccc------------------------cCCCcccccc-------hhHHHHHHHHHHHHHHhcccCCCc
Q 013571 125 QEM--VEW---EHKS------------------------KNNGKMHGCG-------HDVHTTILLGAARLLKHRMDRLKG 168 (440)
Q Consensus 125 ~~~--~~~---~~~~------------------------~~~g~i~GrG-------~k~~~a~~l~a~~~l~~~~~~~~~ 168 (440)
++. ..| +|.. ..+|++|||| ||+++|++|.|+++|.+.+ .+++
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g 161 (404)
T PRK13381 83 GLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHG 161 (404)
T ss_pred cCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 653 111 1221 2467899977 4899999999999998875 4688
Q ss_pred eEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCCCCC
Q 013571 169 TVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRD 246 (440)
Q Consensus 169 ~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~g~n 246 (440)
+|.|+|++|||.+ .|++.++.++. ..|++++++. +.+.+ +. ..++|..+++|+++|+++|++ .|+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~--~~~~~-i~----~~~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDC--CELGE-VV----YENFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC--CCCEEEEecC--CCcce-EE----EecCcceEEEEEEEeEecCCCCCcccCcC
Confidence 9999999999954 69999877643 3688887763 23322 21 235899999999999999987 5888999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcC-
Q 013571 247 PVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQ- 325 (440)
Q Consensus 247 Ai~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~- 325 (440)
||..+++++.+|+++..+........+++++.++|+ |++|++++|+|+.|.++.+++.++|++++++.+..++
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~ 306 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPT 306 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999876433222222346778877763 8999999999999999999999999999999887777
Q ss_pred CeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCC
Q 013571 326 CSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIR 404 (440)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~ 404 (440)
+++++++..........++.++++++.+++++++. |.++. ...+.++||+++|... +|++++ ||+.. .
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~~--GpG~~------~ 375 (404)
T PRK13381 307 ARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIEPK--VIPMRGGTDGAALSAKGLPTPNL--FTGAH------N 375 (404)
T ss_pred cEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCCee--eccCCccchHHHHhcCCCCeEEE--Ccccc------C
Confidence 56766542110111123566899999999999875 76543 2356789999999876 898884 44432 2
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 405 LHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 405 ~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
+|++||||+++++.+++++|..++.++.
T Consensus 376 aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 376 FHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred CcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999998874
No 42
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-45 Score=367.93 Aligned_cols=363 Identities=22% Similarity=0.254 Sum_probs=279.5
Q ss_pred HHHHHHHHHHHhCCCCC-cchHHHHHHHHHHHHhCCCceeecC-----CCceEEEEEcCCCC-CEEEEEEecccCCCCCC
Q 013571 55 EWMRRIRRRIHENPELG-FEEYETSQLVRSELDSLGIEYTWPV-----AKTGIVASVGSGGE-PWFGLRAEMDALPLQEM 127 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s-~~e~~~~~~l~~~l~~~G~~~~~~~-----~~~nv~~~~~~~~~-~~i~~~~H~D~vp~~~~ 127 (440)
++++++++++++|||++ .++.++++|+.++|+++|+.+..+. +.+|++++++++++ |+|+|+||+||||+++.
T Consensus 13 ~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP~g~~ 92 (409)
T COG0624 13 DDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVPAGGG 92 (409)
T ss_pred HHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccCCCCc
Confidence 77889999999999999 8899999999999999999876632 24699999987654 99999999999999875
Q ss_pred CCC---ccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCC---CCCC
Q 013571 128 VEW---EHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGA---VDKF 196 (440)
Q Consensus 128 ~~~---~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~---~~~~ 196 (440)
..| ||. ..++|++|||| |||++++++.|++.+.+.+..++++|.+++++|||++ .|...++.++. ...+
T Consensus 93 ~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 172 (409)
T COG0624 93 EDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGIRP 172 (409)
T ss_pred ccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhccCC
Confidence 555 676 45679999999 6899999999999999987789999999999999954 57777776653 1357
Q ss_pred CEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCC--CCCCCCH----HHHHHHHHHHHHHhhcccCCCCC
Q 013571 197 QGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM--PQDTRDP----VLAASFAILTLQHIVSRETDPLE 270 (440)
Q Consensus 197 d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~--p~~g~nA----i~~~~~~i~~l~~~~~~~~~~~~ 270 (440)
|+++..++......+..... .++|..+++|+++|+++|+|. |+.+.|+ +..+.+++..+.++.......
T Consensus 173 d~~i~~E~~~~~~~~~~~~~---~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~~-- 247 (409)
T COG0624 173 DYEIVGEPTLESEGGDIIVV---GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFDG-- 247 (409)
T ss_pred CEEEeCCCCCcccCCCeEEE---cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccccC--
Confidence 88888775110112222112 468999999999999999998 8899994 445555555444332222221
Q ss_pred CeEEEEEEEecCCc--------ccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCC
Q 013571 271 ARVVTVGFIDAGQA--------GNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA 342 (440)
Q Consensus 271 ~~t~~~~~i~gG~~--------~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (440)
..+++++.+.++.. .|+||++|++++|+|+.|.++.+++.+++++.++......+.+++++. .......+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~--~~~~~~~~ 325 (409)
T COG0624 248 PLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEP--GLGEPPLP 325 (409)
T ss_pred CccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEecc--ccCCcccc
Confidence 35666665555544 599999999999999999999999999999999876543455555542 00233445
Q ss_pred cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 013571 343 TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGA 421 (440)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~ 421 (440)
.+.++++++.+..++++.+|.+.. .....+++|+.++... +| ...+||+.. ..+|++|||++++++.+++
T Consensus 326 ~~~~~~~v~~l~~~~~~~~g~~~~--~~~~G~~~da~~~~~~~~~--~~~fgp~~~-----~~~H~~~E~v~i~~l~~~~ 396 (409)
T COG0624 326 VPGDSPLVAALAEAAEELLGLPPE--VSTGGGTHDARFFARLGIP--AVIFGPGDI-----GLAHQPNEYVELEDLVKGA 396 (409)
T ss_pred CCCchHHHHHHHHHHHHhhCCCce--ecCCCCcchHHHHHhcCCe--eEEECCCCc-----ccccCCCceeeHHHHHHHH
Confidence 667889999999999998777532 2344467999999988 57 334777542 3599999999999999999
Q ss_pred HHHHHHHHHHhc
Q 013571 422 ALHAAVAISYLD 433 (440)
Q Consensus 422 ~~~~~~~~~~~~ 433 (440)
++|++++.+++.
T Consensus 397 ~~~~~~l~~l~~ 408 (409)
T COG0624 397 KVLARLLYELAE 408 (409)
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 43
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.6e-45 Score=366.50 Aligned_cols=346 Identities=17% Similarity=0.137 Sum_probs=272.7
Q ss_pred HHHHHHHHHHHhCCC---------CCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-CCCEEEEEEecccCCC
Q 013571 55 EWMRRIRRRIHENPE---------LGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGLRAEMDALPL 124 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps---------~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~~~~i~~~~H~D~vp~ 124 (440)
+++++.+.++++|++ .+++|.++++||.++|+++|++++.+ ...|+++++++. ++|+|+|+||+||||+
T Consensus 10 ~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp~ 88 (412)
T PRK12892 10 QRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQNL 88 (412)
T ss_pred HHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCCC
Confidence 678888999999876 45678899999999999999998764 456899999763 4589999999999997
Q ss_pred CCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHHHcCCC-----
Q 013571 125 QEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKEGAV----- 193 (440)
Q Consensus 125 ~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~~~~~~----- 193 (440)
+ |+.|| +++++++|.|++.|++.+..++++|.|++++|||++ .|++.++++...
T Consensus 89 ~------------g~~dg---~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~ 153 (412)
T PRK12892 89 G------------GRYDG---ALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALA 153 (412)
T ss_pred C------------Ccccc---hHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHh
Confidence 4 44555 458999999999999988889999999999999963 388888742100
Q ss_pred ------------------CCCCEEEEeccC-----------C---CCCCCcccccCCCcccceeEEEEEEEecCCCCCC-
Q 013571 194 ------------------DKFQGMFGIHIS-----------P---VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM- 240 (440)
Q Consensus 194 ------------------~~~d~~~~~~~~-----------~---~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~- 240 (440)
-..|.+++.++. . .++.+. .......++|..+++|+++|+++|++.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G~~aHa~~~ 232 (412)
T PRK12892 154 ARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTGEAGHAGTT 232 (412)
T ss_pred CccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEEECCCCCCC
Confidence 011223332211 0 011110 011124568999999999999999874
Q ss_pred CC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHHHHHHHHHHHH
Q 013571 241 PQ-DTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIE 318 (440)
Q Consensus 241 p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~ 318 (440)
|+ .|.|||..+++++.+|+++..+.. ...+++++.|+|| .+.|+||++|++++|+|+.|+++.+++.++|+++++
T Consensus 233 p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 309 (412)
T PRK12892 233 PMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCR 309 (412)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 65 689999999999999998654332 2368999999986 799999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCC
Q 013571 319 MQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNET 398 (440)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~ 398 (440)
..+..++++++++. ...+++...++++++.+++++++ +|.++. ....+|+||+++|.+.+|++++ +||...
T Consensus 310 ~~~~~~~~~~e~~~----~~~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~-~gp~~~- 380 (412)
T PRK12892 310 EIARRRGCRVSVDR----IAEYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML-FVPSKG- 380 (412)
T ss_pred HHHHHhCCeEEEEE----EecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE-EeccCC-
Confidence 88877888888776 34566777889999999999998 587543 2467899999999887886543 444332
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 399 LKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 399 ~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
..+|++||+++++++.+++++|+.++.+++.
T Consensus 381 ----~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 381 ----GISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred ----CCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 2489999999999999999999999988864
No 44
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=3.4e-45 Score=365.78 Aligned_cols=353 Identities=15% Similarity=0.122 Sum_probs=272.8
Q ss_pred HHHHHHHHHHHhCCCCCcc----------hHHHHHHHHHHHHhCCCc-eeecCCCceEEEEEcCC---CCCEEEEEEecc
Q 013571 55 EWMRRIRRRIHENPELGFE----------EYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSG---GEPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~----------e~~~~~~l~~~l~~~G~~-~~~~~~~~nv~~~~~~~---~~~~i~~~~H~D 120 (440)
+.+++.++++++|||+|.+ +.++++||+++|+++|++ ++.+ ...|++++++++ ++|+|+|+||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~-~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTLD-ENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEEC-CCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 4678889999999999966 789999999999999997 5443 456799999764 249999999999
Q ss_pred cCCCCCC---------------------CCCccccc--------CCCcccc-------cchhHHHHHHHHHHHHHHhccc
Q 013571 121 ALPLQEM---------------------VEWEHKSK--------NNGKMHG-------CGHDVHTTILLGAARLLKHRMD 164 (440)
Q Consensus 121 ~vp~~~~---------------------~~~~~~~~--------~~g~i~G-------rG~k~~~a~~l~a~~~l~~~~~ 164 (440)
|||+.+. +.|++... ..+.+|| ++||++++++++|+++|++.+.
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 9987441 22332211 1234555 4579999999999999988765
Q ss_pred CCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCC
Q 013571 165 RLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQD 243 (440)
Q Consensus 165 ~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~ 243 (440)
.++++|.|+|++|||.+.|+..++.++. ..++.+.+++ .+.|.+.. .++|..+++|+++|+++|++ .|+.
T Consensus 161 ~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~---~~~g~~~~----~~~g~~~~~i~v~Gk~~Ha~~~p~~ 231 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDG---GPLGELEY----ENFNAASAKITIHGVNVHPGTAKGK 231 (408)
T ss_pred CCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecC---CCcceEEe----ccCceeEEEEEEeeecCCCCCCccc
Confidence 6789999999999996678888864432 3466666653 24454332 24688899999999999987 5899
Q ss_pred CCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHH
Q 013571 244 TRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAV 323 (440)
Q Consensus 244 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~ 323 (440)
|.|||..+++++..|++...+........+++++.++|| |++|++++++|+.|.++.+.+.++|++++++.+..
T Consensus 232 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~ 305 (408)
T PRK05469 232 MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAK 305 (408)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998866432222222345788888875 89999999999999999999999999999998877
Q ss_pred c-CCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCC
Q 013571 324 H-QCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKP 401 (440)
Q Consensus 324 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~ 401 (440)
+ ++++++++.......++++..++++++.+++++++. |.++. ...+.|++|+++|... +|++. +||++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~giP~v~--~gpG~~---- 376 (408)
T PRK05469 306 YGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPI--IKPIRGGTDGSQLSFMGLPCPN--IFTGGH---- 376 (408)
T ss_pred cCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcE--EecCCCcccHHHHhhCCCceEE--ECcCcc----
Confidence 7 567777652110111224677899999999999985 87553 2367799999999876 89876 455432
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 402 FIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 402 ~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
.+|++||+++++++.+++++|.+++..|+++
T Consensus 377 --~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 377 --NFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred --cCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 3899999999999999999999999998875
No 45
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.3e-44 Score=361.87 Aligned_cols=345 Identities=19% Similarity=0.214 Sum_probs=272.0
Q ss_pred HHHHHHHHHHHhC-C---------CCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC--CCCEEEEEEecccC
Q 013571 55 EWMRRIRRRIHEN-P---------ELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG--GEPWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~-p---------s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~--~~~~i~~~~H~D~v 122 (440)
+.+++.+++|++| + |.|++|.++++||.++|+++||+++.. .+.|++++++++ ++|+|+|+||+|||
T Consensus 7 ~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 7 ERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccCC
Confidence 6777888888887 3 778889999999999999999998864 457899999764 35899999999999
Q ss_pred CCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHHHc------
Q 013571 123 PLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKE------ 190 (440)
Q Consensus 123 p~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~~~------ 190 (440)
|++ |.. ++|+++|+++.|+++|++.+..++++|.|++++|||.+ .|++.+++.
T Consensus 86 p~~------------g~~---d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~ 150 (413)
T PRK09290 86 PNG------------GRF---DGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDA 150 (413)
T ss_pred CCC------------CCc---CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHH
Confidence 964 222 34789999999999999988778999999999999963 377766532
Q ss_pred ------------------CCCCCCCEEEEe--ccCCC--------------CCCCcccccCCCcccceeEEEEEEEecCC
Q 013571 191 ------------------GAVDKFQGMFGI--HISPV--------------LPTGTVGSRPGPLLAGSGRFTAVIKGKGG 236 (440)
Q Consensus 191 ------------------~~~~~~d~~~~~--~~~~~--------------~~~g~~~~~~g~~~~g~~~~~i~v~G~~~ 236 (440)
+. +.|++++. +|+.. +|.+.. ......++|..+++|+++|+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~--~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~-~~i~~~~kG~~~~~i~v~Gk~a 227 (413)
T PRK09290 151 LALRDADGVSFAEALAAIGY--DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLP-IGVVTGIVGQRRYRVTFTGEAN 227 (413)
T ss_pred HhccCCCCCCHHHHHHHcCC--ChhhccccccCCCCccEEEEEEeccCHHHHHCCCc-EEEEeeeeccEEEEEEEEEECC
Confidence 21 23544432 22100 111110 1112456899999999999999
Q ss_pred CCC-CC-CCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHHHHHHH
Q 013571 237 HAA-MP-QDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRI 313 (440)
Q Consensus 237 Hss-~p-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i 313 (440)
|+| .| +.|.|||..+++++.+|+++..+.. ...+++++.+++| .+.|+||++|++++|+|+.|+++.+++.++|
T Consensus 228 Has~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i 304 (413)
T PRK09290 228 HAGTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAEL 304 (413)
T ss_pred CCCCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHH
Confidence 988 68 5799999999999999987653221 2468899999975 7999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEc
Q 013571 314 KEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVG 393 (440)
Q Consensus 314 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G 393 (440)
++++++.+..++++++++. ...++++..++++++.+++++++. |.++. .....|+||+++|...+|+++++.
T Consensus 305 ~~~~~~~~~~~~~~~e~~~----~~~~~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~iP~~~~~g- 376 (413)
T PRK09290 305 RAAAEAIAARRGVEVEIEL----ISRRPPVPFDPGLVAALEEAAERL-GLSYR--RLPSGAGHDAQILAAVVPTAMIFV- 376 (413)
T ss_pred HHHHHHHHHHcCCeEEEEE----EecCCCccCCHHHHHHHHHHHHHc-CCCcc--ccCCccchHHHHHhccCCEEEEEe-
Confidence 9999988777788887765 345667778899999999999776 76542 246778999999976689755443
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 394 TRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 394 ~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
|... ..+|++||+++++++.+++++|++++.++++.
T Consensus 377 p~~~-----~~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~~ 412 (413)
T PRK09290 377 PSVG-----GISHNPAEFTSPEDCAAGANVLLHALLELAEE 412 (413)
T ss_pred ccCC-----CCCCCccccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 3321 24899999999999999999999999998864
No 46
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=2.2e-45 Score=372.58 Aligned_cols=361 Identities=13% Similarity=0.111 Sum_probs=267.7
Q ss_pred HHHhcCCcchHHHHHHHHHHHHhCCCCCcc------------hHHHHHHHHHHHHhCCCceeecCCCceEEEEEc-CCCC
Q 013571 44 LLDSAREPEFFEWMRRIRRRIHENPELGFE------------EYETSQLVRSELDSLGIEYTWPVAKTGIVASVG-SGGE 110 (440)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~-~~~~ 110 (440)
+.++++.++ +++++++++|++|||++++ +.++++|+.++|+++||+++... |+++++. +.+.
T Consensus 5 ~~~~~~~~~--~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---n~~~~~~~~~~~ 79 (466)
T PRK07318 5 WKKEVEKRK--DDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---NYAGHIEYGEGE 79 (466)
T ss_pred HHHHHHHhH--HHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec---CccceEEECCCC
Confidence 456667766 8999999999999999865 46799999999999999987532 5666653 2334
Q ss_pred CEEEEEEecccCCCCC-CCCCccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccch
Q 013571 111 PWFGLRAEMDALPLQE-MVEWEHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGA 184 (440)
Q Consensus 111 ~~i~~~~H~D~vp~~~-~~~~~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~ 184 (440)
|+|+|+||+||||+++ |...||. .++||++|||| |||+++++++|++.|++.+..++++|.|+|++|||. +.|+
T Consensus 80 ~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G~ 159 (466)
T PRK07318 80 EVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKCM 159 (466)
T ss_pred CEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchhH
Confidence 8999999999999864 3445776 45689999999 699999999999999998888889999999999995 4699
Q ss_pred HHHHHcCCCCC----CCE---EEEeccC-----------------------CCCCCCcccc-------------------
Q 013571 185 YYMIKEGAVDK----FQG---MFGIHIS-----------------------PVLPTGTVGS------------------- 215 (440)
Q Consensus 185 ~~l~~~~~~~~----~d~---~~~~~~~-----------------------~~~~~g~~~~------------------- 215 (440)
+++++...... +|. ++..+++ ++.+++.+..
T Consensus 160 ~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~ 239 (466)
T PRK07318 160 DYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAFE 239 (466)
T ss_pred HHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHHHH
Confidence 99988643110 111 1111110 1111111100
Q ss_pred --cCCCccccee-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHh------h----c--------------c
Q 013571 216 --RPGPLLAGSG-----RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHI------V----S--------------R 264 (440)
Q Consensus 216 --~~g~~~~g~~-----~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~------~----~--------------~ 264 (440)
.....+||.. |++|+++|+++|+|.|+.|.|||..|++++.+|+.. . . .
T Consensus 240 ~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (466)
T PRK07318 240 AFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAY 319 (466)
T ss_pred HHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcc
Confidence 0001345544 799999999999999999999999999999998641 0 0 0
Q ss_pred cCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCC--
Q 013571 265 ETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA-- 342 (440)
Q Consensus 265 ~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-- 342 (440)
.....+..|+|++.|+||... .|++.+|+|+.|+++.+++.++|++.+++ .+ ++++. ...+++
T Consensus 320 ~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~--~~~~~----~~~~~p~~ 384 (466)
T PRK07318 320 EDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TG--VELSE----HEHQKPHY 384 (466)
T ss_pred cCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cC--eEEEE----ccCCCcee
Confidence 011124579999999997542 79999999999999999999999998764 23 44443 223333
Q ss_pred cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 013571 343 TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAA 422 (440)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~ 422 (440)
.+.++++++.+++++++.+|.+.. +..++|+||++++...+| +||... |+...+|++|||++++++.++++
T Consensus 385 ~~~d~~lv~~l~~a~~~~~g~~~~--~~~~~ggtDa~~~~~~i~-----~Gp~~p--g~~~~aH~~dE~v~i~~l~~~~~ 455 (466)
T PRK07318 385 VPKDDPLVKTLLKVYEKQTGLKGE--EQVIGGGTYARLLKRGVA-----FGAMFP--GSEDTMHQANEYIEIDDLIKAAA 455 (466)
T ss_pred eCCCCHHHHHHHHHHHHHhCCCCC--eeEEcchHhHhhCCCeEE-----eCCCCC--CCCCCCcCCCcceeHHHHHHHHH
Confidence 456899999999999987787543 245688999999864343 443321 23345999999999999999999
Q ss_pred HHHHHHHHHhc
Q 013571 423 LHAAVAISYLD 433 (440)
Q Consensus 423 ~~~~~~~~~~~ 433 (440)
+|+.++.++++
T Consensus 456 v~~~~l~~~~~ 466 (466)
T PRK07318 456 IYAEAIYELAK 466 (466)
T ss_pred HHHHHHHHHhC
Confidence 99999999864
No 47
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=4.7e-44 Score=358.27 Aligned_cols=347 Identities=18% Similarity=0.204 Sum_probs=272.2
Q ss_pred HHHHHHHHHHHhCCCC----------CcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC--CCCEEEEEEecccC
Q 013571 55 EWMRRIRRRIHENPEL----------GFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG--GEPWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~--~~~~i~~~~H~D~v 122 (440)
+++++++++|++|+|. |++|.++++||.++|+++||+++.+ ...|++++++++ ++|+|+|.||+|||
T Consensus 10 ~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~DtV 88 (412)
T PRK12893 10 ERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccCC
Confidence 6888999999999964 4458999999999999999998764 345899999654 25899999999999
Q ss_pred CCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHHHcCCC---
Q 013571 123 PLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKEGAV--- 193 (440)
Q Consensus 123 p~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~~~~~~--- 193 (440)
|.+ |..|| |++++++|.|+++|++.+..++++|.|+|++|||++ .|+..+.+....
T Consensus 89 p~~------------g~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~ 153 (412)
T PRK12893 89 PTG------------GRFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDA 153 (412)
T ss_pred CCC------------Ccccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHH
Confidence 964 34444 689999999999999988778999999999999964 377767643210
Q ss_pred ----------------------------CCCCEEEEeccCCCC---CCCcccccCCCcccceeEEEEEEEecCCCCCC-C
Q 013571 194 ----------------------------DKFQGMFGIHISPVL---PTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM-P 241 (440)
Q Consensus 194 ----------------------------~~~d~~~~~~~~~~~---~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~-p 241 (440)
.+.+..+.+|..++. +.+. .......++|..+++|+++|+++|+|. |
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~p 232 (412)
T PRK12893 154 LARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTTP 232 (412)
T ss_pred HhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCCc
Confidence 012223333321110 0000 011123578999999999999999985 7
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHHHHHHHHHHHHH
Q 013571 242 Q-DTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEM 319 (440)
Q Consensus 242 ~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~ 319 (440)
+ .|.|||..+++++.+|+++..+.. ...+++++.|++| .+.|+||++|++++|+|+.|+++.+++.++|++++++
T Consensus 233 ~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~ 309 (412)
T PRK12893 233 MAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAK 309 (412)
T ss_pred chhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 4 799999999999999988753321 2468999999984 7999999999999999999999999999999999998
Q ss_pred HHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCC
Q 013571 320 QAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETL 399 (440)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~ 399 (440)
.+..++++++++. ...+++...++++++.+++++++. |.++. +....|+||+++|.+.+|.+++ +||...
T Consensus 310 ~~~~~~~~v~~~~----~~~~~~~~~d~~l~~~l~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~~p~~v~-~gp~~~-- 379 (412)
T PRK12893 310 IAAARGVQVTVET----VWDFPPVPFDPALVALVEAAAEAL-GLSHM--RMVSGAGHDAMFLARVAPAAMI-FVPCRG-- 379 (412)
T ss_pred HHHHcCCeEEEEE----EecCCCcCCCHHHHHHHHHHHHHc-CCCcc--ccCCccHHHHHHHHhhCCEEEE-EeecCC--
Confidence 8777788887765 345667777899999999999875 76543 3467789999999887775543 444322
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 400 KPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 400 g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
..+|++||+++++++.+++++|..++.+++.+
T Consensus 380 ---~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~~ 411 (412)
T PRK12893 380 ---GISHNEAEDTEPADLAAGANVLLHAVLELAGR 411 (412)
T ss_pred ---CCCCCccccCCHHHHHHHHHHHHHHHHHhhcc
Confidence 24899999999999999999999999998764
No 48
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=1.2e-44 Score=361.40 Aligned_cols=351 Identities=14% Similarity=0.107 Sum_probs=267.9
Q ss_pred HHHHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCc-eeecCCCceEEEEEcCCCC---CEEEEEEecc
Q 013571 55 EWMRRIRRRIHENPELGF----------EEYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSGGE---PWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nv~~~~~~~~~---~~i~~~~H~D 120 (440)
+++++.+-++++|+|+|+ .+++.+++|+++|+++|++ ++.+....||+|++++..+ |+|+|.||||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 567777888889999887 5558999999999999997 8776546789999976543 9999999999
Q ss_pred cCCCCCCC-------------------------CC---cccc--------cCCCcccccchhHHHHHHHHHHHHHHhccc
Q 013571 121 ALPLQEMV-------------------------EW---EHKS--------KNNGKMHGCGHDVHTTILLGAARLLKHRMD 164 (440)
Q Consensus 121 ~vp~~~~~-------------------------~~---~~~~--------~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~ 164 (440)
|||..... .| |+.. ..++.+||++||+++|++|+|++.|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99842211 12 2331 345699999999999999999999988643
Q ss_pred CCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCC-CC
Q 013571 165 RLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMP-QD 243 (440)
Q Consensus 165 ~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p-~~ 243 (440)
.++++|.|+|++|||.+.|++.+..++. +.++.++++ +.|+|.+..+ .+|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~---gep~g~i~~~----~~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVD---GGPLGELEYE----TFSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeC---CCCCCeEEEc----cccceEEEEEEEEEecCcccChHH
Confidence 4689999999999997678888765432 456666555 3566654333 257899999999999999976 57
Q ss_pred CCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHH
Q 013571 244 TRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAV 323 (440)
Q Consensus 244 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~ 323 (440)
+.||+..+.+++..+..... ...++.+.+.+++|. .|.+|++|++++++|+.+.++.+++.++|++++++.+..
T Consensus 234 g~nAi~~a~~~~~~l~~~~~-----~~~t~~~~g~i~~g~-i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~ 307 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDDR-----PEYTEGREGFFHLLS-IDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNE 307 (410)
T ss_pred HHHHHHHHHHHHHhcCCcCC-----CccccceeEEEEEEe-EEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988776654311 111111223455553 566999999999999999999999999999999998877
Q ss_pred cCC-eEEEEEeccccCC-CCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCC
Q 013571 324 HQC-SATIDFLEEKMRH-YPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLK 400 (440)
Q Consensus 324 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g 400 (440)
++. .+++++... ... .+.++.++++++.++++++++ |.++. .....|+||+++|... +|++. +||+..
T Consensus 308 ~g~~~v~~~~~~~-~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~~--~~~~~ggtDa~~~~~~Gip~~~--~G~G~~--- 378 (410)
T TIGR01882 308 YGQDRIKLDMNDQ-YYNMAEKIEKVMEIVDIAKQAMENL-GIEPK--ISPIRGGTDGSQLSYMGLPTPN--IFAGGE--- 378 (410)
T ss_pred cCCceEEEEEEee-ecChhhccCCCHHHHHHHHHHHHHh-CCCCc--ccccceechHHHHHhCCCCCCe--EcCCcc---
Confidence 773 455554211 111 124567899999999999986 76553 2457899999999887 88876 565433
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 401 PFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 401 ~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
.+|++||||+++++.+++++|.+++..+.
T Consensus 379 ---~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 379 ---NMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred ---cCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 39999999999999999999999998774
No 49
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-44 Score=367.26 Aligned_cols=357 Identities=14% Similarity=0.120 Sum_probs=265.9
Q ss_pred HHHHHHHHHHHhCCCCCc-----ch----HHHHHHHHHHHHhCCCceeecCCCceEE-EEEcCCCCCEEEEEEecccCCC
Q 013571 55 EWMRRIRRRIHENPELGF-----EE----YETSQLVRSELDSLGIEYTWPVAKTGIV-ASVGSGGEPWFGLRAEMDALPL 124 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~-----~e----~~~~~~l~~~l~~~G~~~~~~~~~~nv~-~~~~~~~~~~i~~~~H~D~vp~ 124 (440)
+++++++++|++|||++. +| ...++||.++|+++|++++.. .++++ +++++.+.|+|+|+||+||||+
T Consensus 46 ~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~--~~~v~~~~~~g~~~~~l~l~gH~DvVp~ 123 (520)
T PRK06156 46 AAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV--DNRVLEIGLGGSGSDKVGILTHADVVPA 123 (520)
T ss_pred HHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec--CCeEEEEEecCCCCCeEEEEEecCccCC
Confidence 899999999999999974 22 356799999999999998532 33344 6776554589999999999998
Q ss_pred CC--CCC-----Ccccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCC
Q 013571 125 QE--MVE-----WEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGA 192 (440)
Q Consensus 125 ~~--~~~-----~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~ 192 (440)
+. |.. .||.. ++||++|||| ||++++++++|+++|++.+.+++++|.|+|++|||. +.|++.+++++.
T Consensus 124 ~~~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~ 203 (520)
T PRK06156 124 NPELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYT 203 (520)
T ss_pred CCccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHHHHhcC
Confidence 54 433 56763 5689999999 589999999999999988877889999999999995 569999987654
Q ss_pred CCCCCEEEEecc-------CCC--------------------------CCCCccccc------C----------------
Q 013571 193 VDKFQGMFGIHI-------SPV--------------------------LPTGTVGSR------P---------------- 217 (440)
Q Consensus 193 ~~~~d~~~~~~~-------~~~--------------------------~~~g~~~~~------~---------------- 217 (440)
..+..++++. +++ ...+.+... .
T Consensus 204 --~~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~ 281 (520)
T PRK06156 204 --PPDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAA 281 (520)
T ss_pred --CCCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHH
Confidence 2333332211 111 000000000 0
Q ss_pred -CCccccee---------EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc-----------------------
Q 013571 218 -GPLLAGSG---------RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR----------------------- 264 (440)
Q Consensus 218 -g~~~~g~~---------~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~----------------------- 264 (440)
-..++|.. +++|+++|+++|+|+|+.|.|||..+++++.+|++....
T Consensus 282 ~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~ 361 (520)
T PRK06156 282 QVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKF 361 (520)
T ss_pred HHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcC
Confidence 00122444 899999999999999999999999999999999752100
Q ss_pred ----cCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCC
Q 013571 265 ----ETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHY 340 (440)
Q Consensus 265 ----~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 340 (440)
.....+..+++++.|++|. +.|++++|+|++|+++.+++.++|++.+++.+..++.++++... ..++
T Consensus 362 g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~~---~~~p 432 (520)
T PRK06156 362 GVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDYY---WGEP 432 (520)
T ss_pred CccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEeec---CCCc
Confidence 0011244578888888876 58999999999999999999999999998876666766665431 1122
Q ss_pred CCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013571 341 PATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIG 420 (440)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~ 420 (440)
...+.++++++.+.+++++.+|.++. +..+.|+||++++. ++ +.+||... |....+|++||+|+++++.++
T Consensus 433 ~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~ggTDa~~~~---~~--v~fGP~~~--g~~~~aHt~dE~V~ie~l~~~ 503 (520)
T PRK06156 433 MVRDPKGPWLKTLLDVFGHFTGLDAK--PVAIAGSTNAKLFP---NA--VSFGPAMP--GVKYTGHTENEFKTVEQFMLD 503 (520)
T ss_pred eeeCCCCHHHHHHHHHHHHHhCCCCc--eeeecChhhhhhCC---cc--EEEcCCCC--CCCCCCcCcccCCCHHHHHHH
Confidence 23455789999999999999887553 34678899998874 33 34777532 233468999999999999999
Q ss_pred HHHHHHHHHHHhc
Q 013571 421 AALHAAVAISYLD 433 (440)
Q Consensus 421 ~~~~~~~~~~~~~ 433 (440)
+++|++++.++++
T Consensus 504 ~~i~~~~l~~l~~ 516 (520)
T PRK06156 504 LQMYTEMLIRIGN 516 (520)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999986
No 50
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.1e-43 Score=351.79 Aligned_cols=334 Identities=17% Similarity=0.143 Sum_probs=263.3
Q ss_pred CCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-C-CCEEEEEEecccCCCCCCCCCcccccCCCcccccchh
Q 013571 69 ELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-G-EPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHD 146 (440)
Q Consensus 69 s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~-~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k 146 (440)
+.+.+|.++++||.++|+++|++++.+. ..|+++++++. + +|+|+|+||+||||.+ |. .++|
T Consensus 34 ~~~~~e~~~~~~l~~~l~~~G~~v~~~~-~gNl~a~~~g~~~~~~~l~~~~H~DtVp~g------------g~---~D~k 97 (414)
T PRK12891 34 ALTDGDREARDLFVAWARDAGCTVRVDA-MGNLFARRAGRDPDAAPVMTGSHADSQPTG------------GR---YDGI 97 (414)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEECC-CCCEEEEecCCCCCCCeEEEEecccCCCCC------------cc---ccch
Confidence 3466789999999999999999998754 45899999764 2 4899999999999964 22 2579
Q ss_pred HHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHH------------------------HHcCCC---
Q 013571 147 VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYM------------------------IKEGAV--- 193 (440)
Q Consensus 147 ~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l------------------------~~~~~~--- 193 (440)
++++++|+|+++|++.+..++++|.|++++|||++ .|+..+ .+.|+.
T Consensus 98 ~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 177 (414)
T PRK12891 98 YGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAE 177 (414)
T ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCccc
Confidence 99999999999999999889999999999999964 366533 344431
Q ss_pred ----CCCCEEEEeccCCC---CCCCcccccCCCcccceeEEEEEEEecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcc
Q 013571 194 ----DKFQGMFGIHISPV---LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQ-DTRDPVLAASFAILTLQHIVSR 264 (440)
Q Consensus 194 ----~~~d~~~~~~~~~~---~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~-~g~nAi~~~~~~i~~l~~~~~~ 264 (440)
.+.++.+.+|.+++ ++.+. .......++|..+++|+++|+++|+| .|+ .|.|||..+++++.+|+++..+
T Consensus 178 ~~~~~~~~~~~e~h~e~g~vle~~~~-~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~ 256 (414)
T PRK12891 178 PVGGYPVHAAYELHIEQGAILERAGK-TIGVVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGRR 256 (414)
T ss_pred ccccCCCCEEEEEEeCCCHHHHHCCC-cEEEEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh
Confidence 12234455554432 11120 01112346899999999999999998 676 5899999999999999887542
Q ss_pred cCCCCCCeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCc
Q 013571 265 ETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPAT 343 (440)
Q Consensus 265 ~~~~~~~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (440)
. ....++|++.|+|| .+.|+||++|++++|+|+.|.++.+++.++|+++++..+..++++++++. ...++++
T Consensus 257 ~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~ 329 (414)
T PRK12891 257 D---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARIADETGLRADIEQ----IFGYAPA 329 (414)
T ss_pred c---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE----EecCCCc
Confidence 2 12469999999997 69999999999999999999999999999999999988877888888776 4556677
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013571 344 VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAAL 423 (440)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~ 423 (440)
..++++++.+++++++. |.+.. ...+.++||++++...+|+++++ ||.. ...+|++||+++++++..++++
T Consensus 330 ~~d~~lv~~l~~a~~~~-G~~~~--~~~~~ggtDa~~~~~giPt~~~~-gp~~-----~~~aH~~dE~v~i~~l~~~~~i 400 (414)
T PRK12891 330 PFAPGCIDAVRDAARAL-GLSHM--DIVSGAGHDACFAARGAPTGMIF-VPCV-----DGLSHNEAEAITPEWFAAGADV 400 (414)
T ss_pred CCCHHHHHHHHHHHHHc-CCCce--ecCCcchHHHHHHHhhCCEEEEE-EcCC-----CCCCCCccccCCHHHHHHHHHH
Confidence 78899999999998765 77543 24678899988886669975543 3332 2348999999999999999999
Q ss_pred HHHHHHHHhccc
Q 013571 424 HAAVAISYLDNL 435 (440)
Q Consensus 424 ~~~~~~~~~~~~ 435 (440)
|+.++.++.+..
T Consensus 401 l~~~l~~~~~~~ 412 (414)
T PRK12891 401 LLRAVLQSAQEA 412 (414)
T ss_pred HHHHHHHHhhhc
Confidence 999999997653
No 51
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=4.8e-44 Score=348.63 Aligned_cols=326 Identities=13% Similarity=0.066 Sum_probs=254.4
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCCcccccCCCc
Q 013571 60 IRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGK 139 (440)
Q Consensus 60 ~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~ 139 (440)
++++|++|||++++|.++++||.++|+++|+++..+ ...|+++..++ ++|+|+|+|||||||. .|+. ..++|+
T Consensus 2 ~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~~~~-~~~~i~~~~H~D~vp~----~~~~-~~~~g~ 74 (336)
T TIGR01902 2 LLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLIID-DAGNFILGKGD-GHKKILLAGHVDTVPG----YIPV-KIEGGL 74 (336)
T ss_pred hHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEEC-CCCcEEEEeCC-CCceEEEEccccccCC----Cccc-EEeCCE
Confidence 588999999999999999999999999999998543 34578887643 3599999999999984 2433 346899
Q ss_pred ccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccc
Q 013571 140 MHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGS 215 (440)
Q Consensus 140 i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~ 215 (440)
+|||| ||++++++|+|++.|++.+ .+|.|++++|||. +.|+++++++.. .+++++.+++. .+.
T Consensus 75 i~GrG~~D~Kg~~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~ept~---~~~--- 141 (336)
T TIGR01902 75 LYGRGAVDAKGPLIAMIFATWLLNEKG----IKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVGEPSG---AEG--- 141 (336)
T ss_pred EEEecccCCCcHHHHHHHHHHHHHhCC----CcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEecCCC---Ccc---
Confidence 99999 5899999999999997643 5899999999995 469999988743 34777766421 111
Q ss_pred cCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEE
Q 013571 216 RPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFG 295 (440)
Q Consensus 216 ~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~ 295 (440)
...+++|..+++++++|+++|+|.|. ||+..+.+++++|.+...... ....++++++.++||.+.|+||++|+++
T Consensus 142 -i~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~gg~~~nvIP~~a~~~ 216 (336)
T TIGR01902 142 -ITLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQPE-NYDKPSIVPTIIRFGESYNDTPAKLELH 216 (336)
T ss_pred -eeeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhcccc-CCCCCcceeEEEEccCCCcCCCceEEEE
Confidence 12346899999999999999999885 499999999999974321111 1223578899999999999999999999
Q ss_pred EEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCC--cCCCHHHHHHHHHHHHhhcCCCCcccCCCCc
Q 013571 296 GTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA--TVNDEKMYEHGKRVGASMVGEPNVHLTPVEM 373 (440)
Q Consensus 296 ~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 373 (440)
+|+|+.|+++.+++.+++++. .+.++++. ..++| .+.++++++.++++++++ +.++. .....
T Consensus 217 idiR~~p~~~~~~~~~~i~~~-------~~~~~~~~------~~~~p~~~~~~~~lv~~~~~a~~~~-~~~~~--~~~~~ 280 (336)
T TIGR01902 217 FDLRYPPNNKPEEAIKEITDK-------FPICLEIV------DETPPYKVSRNNPLVRAFVRAIRKQ-GMKPR--LKKKT 280 (336)
T ss_pred EEEeeCCCCCHHHHHHHHHhc-------cCceEEEE------eccCceecCCCCHHHHHHHHHHHHc-CCCeE--Eeecc
Confidence 999999999999988887761 23333322 22233 356889999999999987 55432 23556
Q ss_pred ccccHHHHHHH--hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 374 GAEDFSFYTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 374 g~tD~~~~~~~--~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
|+||++++.+. +|++. +||+.. ..+|++||+++++++.+++++|.+++..+++
T Consensus 281 g~tD~~~~~~~~g~p~v~--~Gpg~~-----~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~ 335 (336)
T TIGR01902 281 GTSDMNILAPIWTVPMVA--YGPGDS-----TLDHTPQEKISLAEYLIGIKTLMLAIEELWQ 335 (336)
T ss_pred ccCccceeccccCCCeEE--ECCCCc-----ccCCCCcceeEHHHHHHHHHHHHHHHHHHhc
Confidence 88999999875 56554 777543 3489999999999999999999999998864
No 52
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=8.7e-44 Score=359.11 Aligned_cols=349 Identities=13% Similarity=0.068 Sum_probs=253.3
Q ss_pred HHHHHHHHHHHhCCCCCcch----------HHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCC
Q 013571 55 EWMRRIRRRIHENPELGFEE----------YETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPL 124 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e----------~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~ 124 (440)
+++++++++|++|||+++++ .+.++|+.++|+++||+++.+..+.+++++++ +++|+|+|+||+||||+
T Consensus 11 ~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g-~~~~~lll~gH~DvVp~ 89 (444)
T PRK07205 11 DACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIG-QGEELLAILCHLDVVPE 89 (444)
T ss_pred HHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEec-CCCcEEEEEEeeccCCC
Confidence 88999999999999998754 56788999999999999876544456777764 33489999999999999
Q ss_pred CCCCCC---ccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCC--
Q 013571 125 QEMVEW---EHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVD-- 194 (440)
Q Consensus 125 ~~~~~~---~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~-- 194 (440)
++...| ||. .++||++|||| |||+++++|.|+++|++.+..++++|.|+|++|||. +.|+..+++.....
T Consensus 90 ~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~~~ 169 (444)
T PRK07205 90 GDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQATM 169 (444)
T ss_pred CCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCCCe
Confidence 764445 676 46789999999 699999999999999998888899999999999995 45888877642110
Q ss_pred --CCC--------------EEEEeccCCCCCCCcc--------cccCCC---------------cccce----eEEEEEE
Q 013571 195 --KFQ--------------GMFGIHISPVLPTGTV--------GSRPGP---------------LLAGS----GRFTAVI 231 (440)
Q Consensus 195 --~~d--------------~~~~~~~~~~~~~g~~--------~~~~g~---------------~~~g~----~~~~i~v 231 (440)
..| +.+..+ ++... ...+.. .++|. .+.+|++
T Consensus 170 ~~~~~~~~~v~~~ekG~~~~~i~~~-----~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v 244 (444)
T PRK07205 170 GFAPDSSFPLTYAEKGLLQAKLVGP-----GSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTV 244 (444)
T ss_pred eECCCCCCceEEEEeceEEEEEEeC-----CccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEE
Confidence 111 111111 11110 000000 11221 2348999
Q ss_pred EecCCCCCCCCCCCCHHHHHHHHHHHHHHhh-----cc--------------cCC-CCCCeEEEEEEEecCCcccccccc
Q 013571 232 KGKGGHAAMPQDTRDPVLAASFAILTLQHIV-----SR--------------ETD-PLEARVVTVGFIDAGQAGNIIPEI 291 (440)
Q Consensus 232 ~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~-----~~--------------~~~-~~~~~t~~~~~i~gG~~~n~iP~~ 291 (440)
+|+++|+|+|+.|.|||..+++++.++++.. .+ ..+ ....+++|++. .|+||++
T Consensus 245 ~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~------~nvvP~~ 318 (444)
T PRK07205 245 LGKSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG------LTITKEK 318 (444)
T ss_pred EeEEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE------EEEECCE
Confidence 9999999999999999999999998886431 00 001 12356777765 4799999
Q ss_pred eEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCC--cCCCHHHHHHHHHHHHhhcCCCCcccC
Q 013571 292 VRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA--TVNDEKMYEHGKRVGASMVGEPNVHLT 369 (440)
Q Consensus 292 a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (440)
|++++|+|+.|+++.+++.+++++++++ .+.++ +. ...+++ .+.++++++.+.+++++.+|.+.. .
T Consensus 319 a~~~ld~R~~p~~~~e~v~~~i~~~~~~----~~v~~--~~----~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~--~ 386 (444)
T PRK07205 319 SEIRIDIRIPVLADKEKLVQQLSQKAQE----YGLTY--EE----FDYLAPLYVPLDSELVSTLMSVYQEKTGDDSP--A 386 (444)
T ss_pred EEEEEEEeCCCCCCHHHHHHHHHHHHHH----cCcEE--EE----ecCCCceeeCCCcHHHHHHHHHHHHHhCCCCc--e
Confidence 9999999999999999999999998764 34333 32 122233 456789999999999998887432 2
Q ss_pred CCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 370 PVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 370 ~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
..+.|++|+.++ .|.+ .+|+..+ |+...+|++||||+++++.+++++|++++.+++++
T Consensus 387 ~~~gg~~~~~~~---~~~i--~~G~~~P--g~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~~ 444 (444)
T PRK07205 387 QSSGGATFARTM---PNCV--AFGALFP--GAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTTD 444 (444)
T ss_pred EEeccHHHHHhC---CCcE--EECCccC--CCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhcC
Confidence 344555554432 2433 4663321 23456999999999999999999999999998764
No 53
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.2e-42 Score=346.16 Aligned_cols=343 Identities=19% Similarity=0.178 Sum_probs=264.2
Q ss_pred HHHHHHHHHHHhC---------CCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC--CCCEEEEEEecccCC
Q 013571 55 EWMRRIRRRIHEN---------PELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG--GEPWFGLRAEMDALP 123 (440)
Q Consensus 55 ~~~~~~~~~l~~~---------ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~--~~~~i~~~~H~D~vp 123 (440)
+++++.+.++.+| ||.+++|.++++||.++|+++||+++.. ...|+++++++. ++|+|+|+|||||||
T Consensus 9 ~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp 87 (414)
T PRK12890 9 ERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVP 87 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCC
Confidence 3455555555554 4778999999999999999999999864 356899999764 358999999999999
Q ss_pred CCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHHHc-------
Q 013571 124 LQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKE------- 190 (440)
Q Consensus 124 ~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~~~------- 190 (440)
++ |.. ++|++++++|.+++.|++.+..++++|.|++++|||++ .|++.+.+.
T Consensus 88 ~~------------g~~---D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~ 152 (414)
T PRK12890 88 NG------------GRY---DGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVL 152 (414)
T ss_pred CC------------CCc---CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHH
Confidence 63 322 46889999999999999888778999999999999952 366555332
Q ss_pred -----------------CCCCCCCEEEE-------------eccCCCC---CCCcccccCCCcccceeEEEEEEEecCCC
Q 013571 191 -----------------GAVDKFQGMFG-------------IHISPVL---PTGTVGSRPGPLLAGSGRFTAVIKGKGGH 237 (440)
Q Consensus 191 -----------------~~~~~~d~~~~-------------~~~~~~~---~~g~~~~~~g~~~~g~~~~~i~v~G~~~H 237 (440)
|. ..|.+.+ +|...+. +.+. .......++|..+++|+++|+++|
T Consensus 153 ~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aH 229 (414)
T PRK12890 153 ATRDDDGTTLAEALRRIGG--DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANH 229 (414)
T ss_pred hccCCCCCCHHHHHHHcCC--ChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCC
Confidence 21 1222111 1111000 0010 001123568999999999999999
Q ss_pred CCC-CC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEec-CCcccccccceEEEEEEecCChhhHHHHHHHHH
Q 013571 238 AAM-PQ-DTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDA-GQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIK 314 (440)
Q Consensus 238 ss~-p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~g-G~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~ 314 (440)
+|. |+ .+.|||..+++++.+|+++..+.. ...+++++.|++ |.+.|+||++|++++|+|+.|+++.+++.++|+
T Consensus 230 as~~P~~~g~nAI~~~~~~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~ 306 (414)
T PRK12890 230 AGTTPMDLRRDALVAAAELVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALL 306 (414)
T ss_pred CCcCChhhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHH
Confidence 985 85 458999999999999998753322 356889999997 489999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEcc
Q 013571 315 EVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGT 394 (440)
Q Consensus 315 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~ 394 (440)
+++++.+...+++++++. ...++++..++++++.+.+++++. |.++. .....|+||+++|.+..|.+++ +||
T Consensus 307 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~gp~~~~-~gp 378 (414)
T PRK12890 307 AELEAIAAARGVRIELER----LSRSEPVPCDPALVDAVEAAAARL-GYPSR--RMPSGAGHDAAAIARIGPSAMI-FVP 378 (414)
T ss_pred HHHHHHHHHhCCeEEEEE----eecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcccHHHHHHHhhCCEEEE-Eec
Confidence 999988877788888766 345667778899999999999885 87543 2457789999999987665543 444
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 395 RNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 395 ~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
... ..+|++||++++++|.+++++|+.++.++.
T Consensus 379 ~~~-----~~aHs~dE~v~i~~l~~~~~i~~~ll~~l~ 411 (414)
T PRK12890 379 CRG-----GISHNPEEAMDPEDLAAGARVLLDAVLRLD 411 (414)
T ss_pred CCC-----CCCCCcCccCCHHHHHHHHHHHHHHHHHHh
Confidence 322 248999999999999999999999999874
No 54
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-42 Score=321.84 Aligned_cols=363 Identities=16% Similarity=0.146 Sum_probs=281.8
Q ss_pred HHHHHHHHHHHhCCCCCcc--hH-HHHHHHHHHHHhCCCceee---cCCCceEEEEEcCCC--CCEEEEEEecccCCCCC
Q 013571 55 EWMRRIRRRIHENPELGFE--EY-ETSQLVRSELDSLGIEYTW---PVAKTGIVASVGSGG--EPWFGLRAEMDALPLQE 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~--e~-~~~~~l~~~l~~~G~~~~~---~~~~~nv~~~~~~~~--~~~i~~~~H~D~vp~~~ 126 (440)
...+..++++++||++-.+ -. .+++|+.++.+.+|..++. .++.++++.+|.|+. -|+|+|++|+||||+..
T Consensus 25 ~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~ 104 (420)
T KOG2275|consen 25 NISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFR 104 (420)
T ss_pred chHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCc
Confidence 4556678999999988654 24 7899999999999997643 556889999998763 48999999999999854
Q ss_pred C--CCCcccc--cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcCCCCCCC
Q 013571 127 M--VEWEHKS--KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAVDKFQ 197 (440)
Q Consensus 127 ~--~~~~~~~--~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~~~~~~d 197 (440)
. .-.||.. .++|.||||| ||+..++.|+|++.|+..|++++|+|.+.|++|||.+ .|++.+++...+.+..
T Consensus 105 e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l~ 184 (420)
T KOG2275|consen 105 EKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKLN 184 (420)
T ss_pred ccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhcccc
Confidence 2 3335553 3689999999 5889999999999999999999999999999999954 5999998855566777
Q ss_pred EEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc---------CCC
Q 013571 198 GMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE---------TDP 268 (440)
Q Consensus 198 ~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~---------~~~ 268 (440)
..++++.+...+... ...+.++||..|++|+++|++||+|.| .-..|+..+.+++.++++..... ...
T Consensus 185 ~~filDEG~~se~d~--~~vfyaEkg~w~~~v~~~G~~GHss~~-~~nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~~ 261 (420)
T KOG2275|consen 185 LGFILDEGGATENDF--ATVFYAEKGPWWLKVTANGTPGHSSYP-PPNTAIEKLEKLVESLEEFREKQVDLLASGPKLAL 261 (420)
T ss_pred eeEEecCCCCCcccc--eeEEEEeeceeEEEEEecCCCCCCCCC-CCccHHHHHHHHHHHHHHhHHHHHHHhhcCCceec
Confidence 788877542223232 344567899999999999999999986 33568888888888887765211 123
Q ss_pred CCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHH-HHHHHHHHHHcCCeEEEEEecc---ccCCCCCcC
Q 013571 269 LEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRI-KEVIEMQAAVHQCSATIDFLEE---KMRHYPATV 344 (440)
Q Consensus 269 ~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i-~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 344 (440)
...+|+|++.|+||.+.|++|++.++.+|+|+.|..+..++.+++ ++++++ .+..+++++-+. ...+..+.+
T Consensus 262 ~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~----~~eg~t~~f~~~~~~~~~~~t~~~ 337 (420)
T KOG2275|consen 262 GDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEE----AGEGVTLEFSQKVILDYPPVTPTD 337 (420)
T ss_pred cceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhh----cCCceEEeccCcccCCCCCCCCCC
Confidence 568999999999999999999999999999999999999999998 555543 343344443211 122223334
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAAL 423 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~ 423 (440)
.+.|.+..+..+.++. +.+.. +...+|+||.++++.. +|. +.+.+..+. ....|..||++..+.+.+++++
T Consensus 338 ~s~p~w~~~~~a~~~~-~~k~~--~~i~~gstdsr~~rn~gvp~-~~fsp~~nt----~~~~H~hnE~l~~~~~l~gi~~ 409 (420)
T KOG2275|consen 338 DSNPFWTAFAGALKDE-GGKGY--PEIGPGSTDSRHIRNEGVPA-IGFSPIINT----PMLLHDHNEFLNEKVFLRGIEI 409 (420)
T ss_pred CCChHHHHHHHHHHHh-cCccc--eeecccccccchhhhcCcch-hcccccccc----cceecchhhhhCchhhhhhhhH
Confidence 4678999999999998 44332 4688999999999998 774 445555443 3568999999999999999999
Q ss_pred HHHHHHHHh
Q 013571 424 HAAVAISYL 432 (440)
Q Consensus 424 ~~~~~~~~~ 432 (440)
|..++.++.
T Consensus 410 ~~~~i~~~~ 418 (420)
T KOG2275|consen 410 YYTIIVNLA 418 (420)
T ss_pred HHHHHHhhc
Confidence 999887764
No 55
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=2.4e-41 Score=343.81 Aligned_cols=346 Identities=15% Similarity=0.136 Sum_probs=256.4
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC----CCCEEEEEEecccCCCCC----
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG----GEPWFGLRAEMDALPLQE---- 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~----~~~~i~~~~H~D~vp~~~---- 126 (440)
+++++++++|++||++|++|.++++|+.++|+++|++++++. ..|+++++++. +.|+|+|.||+||||++.
T Consensus 4 ~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~ 82 (477)
T TIGR01893 4 SRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQDE-VGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSL 82 (477)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEeC-CCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCC
Confidence 678899999999999999999999999999999999987654 45899998642 248999999999999864
Q ss_pred --CCCCcccc-cCCCcccccch------hHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCC
Q 013571 127 --MVEWEHKS-KNNGKMHGCGH------DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKF 196 (440)
Q Consensus 127 --~~~~~~~~-~~~g~i~GrG~------k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~ 196 (440)
|...||.. .+||++||||. |++++++|++++. .+ .++++|.++|++|||++ .|++.+..+.. ..
T Consensus 83 ~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 83 HDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 23345664 56899999993 5788888887664 33 35679999999999954 69998865432 33
Q ss_pred CEEEEeccCC------CCCCCc-c----cccCCCcccceeEEEEEEEe-cCCCCC-CCCCC-CCHHHHHHHHHHHHHHhh
Q 013571 197 QGMFGIHISP------VLPTGT-V----GSRPGPLLAGSGRFTAVIKG-KGGHAA-MPQDT-RDPVLAASFAILTLQHIV 262 (440)
Q Consensus 197 d~~~~~~~~~------~~~~g~-~----~~~~g~~~~g~~~~~i~v~G-~~~Hss-~p~~g-~nAi~~~~~~i~~l~~~~ 262 (440)
+.++..++.. +.+.+. + .......++|..+++|+++| +++|++ .|+.+ .||+..+++++.++++..
T Consensus 157 ~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~ 236 (477)
T TIGR01893 157 KILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL 236 (477)
T ss_pred cEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC
Confidence 5555544211 011110 0 00000114789999999999 999998 58777 599999999999998752
Q ss_pred cccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHH--------------------
Q 013571 263 SRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAA-------------------- 322 (440)
Q Consensus 263 ~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~-------------------- 322 (440)
..+++.+.||.+.|+||++|++++|+|.......+.+.+.+.+.+++.+.
T Consensus 237 ----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (477)
T TIGR01893 237 ----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVF 306 (477)
T ss_pred ----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCccccc
Confidence 25688899999999999999999998866666665555555555443321
Q ss_pred ------------------------------------------------------------------------HcCCeEEE
Q 013571 323 ------------------------------------------------------------------------VHQCSATI 330 (440)
Q Consensus 323 ------------------------------------------------------------------------~~~~~~~~ 330 (440)
..+ +++
T Consensus 307 d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~--~~v 384 (477)
T TIGR01893 307 SENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAG--ARV 384 (477)
T ss_pred CHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcC--eEE
Confidence 122 233
Q ss_pred EEeccccCCCCC--cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccc-eEEEccCCCCCCCCCCCCC
Q 013571 331 DFLEEKMRHYPA--TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAA-HFYVGTRNETLKPFIRLHS 407 (440)
Q Consensus 331 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v-~~~~G~~~~~~g~~~~~H~ 407 (440)
+. ...+++ ++.++|+++.+.+++++.+|.++. ....+|++|+++|.+..|.+ .+.+||... .+|+
T Consensus 385 ~~----~~~~~p~~~~~d~plv~~l~~a~~~~~g~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp~~~------~~H~ 452 (477)
T TIGR01893 385 EV----SAGYPSWQPDPQSNLLDTARKVYSEMFGEDPE--VKVIHAGLECGIISSKIPDIDMISIGPNIY------DPHS 452 (477)
T ss_pred EE----ecCCCcccCCCCCHHHHHHHHHHHHHHCCCCe--EEEeecCccHHHHHhhCCCceEEEeCCCCC------CCCC
Confidence 32 122333 456899999999999999998653 24788899999998865544 456888654 3999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHH
Q 013571 408 PYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 408 ~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
+||+|++++|.+++++|.+++..+
T Consensus 453 ~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 453 PNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred CCceeeHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998654
No 56
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=7.1e-41 Score=333.55 Aligned_cols=331 Identities=18% Similarity=0.170 Sum_probs=256.6
Q ss_pred CCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-C-CCEEEEEEecccCCCCCCCCCcccccCCCcccccch
Q 013571 68 PELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-G-EPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGH 145 (440)
Q Consensus 68 ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~-~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~ 145 (440)
.+.|++|.++++||.++|+++|++++.+ ...|++++++++ + +|+|+|+||+||||.+ |+.+|+
T Consensus 24 ~~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~-- 88 (401)
T TIGR01879 24 LALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQ-- 88 (401)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCH--
Confidence 3557889999999999999999998865 346899999764 2 4899999999999964 455553
Q ss_pred hHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHHHcCCC---------------------C----
Q 013571 146 DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKEGAV---------------------D---- 194 (440)
Q Consensus 146 k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~~~~~~---------------------~---- 194 (440)
.+++++|+++++|++.+.+++++|.|++++|||++ .|++.++..... .
T Consensus 89 -~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~ 167 (401)
T TIGR01879 89 -LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLP 167 (401)
T ss_pred -HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCcc
Confidence 48899999999999999889999999999999952 477777542100 0
Q ss_pred --------CCCEEEEeccCCCC---CCCcccccCCCcccceeEEEEEEEecCCCCCC-CC-CCCCHHHHHHHHHHHHHHh
Q 013571 195 --------KFQGMFGIHISPVL---PTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM-PQ-DTRDPVLAASFAILTLQHI 261 (440)
Q Consensus 195 --------~~d~~~~~~~~~~~---~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~-p~-~g~nAi~~~~~~i~~l~~~ 261 (440)
++++.+.+|.+.+- +.|. .......++|..|++|+++|+++|++. |+ .+.||+..+++++.+|+++
T Consensus 168 ~~~~~~~~~~~~~~e~Hieqg~~l~~~g~-~~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l 246 (401)
T TIGR01879 168 NQPLRPRGDIKAYVELHIEQGPVLESNGQ-PIGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEK 246 (401)
T ss_pred cccccccccccEEEEEEEcCCcChhhCCC-eEEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 11223333322210 0110 011123468999999999999999985 53 5899999999999999987
Q ss_pred hcccCCCCCCeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCC
Q 013571 262 VSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHY 340 (440)
Q Consensus 262 ~~~~~~~~~~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 340 (440)
..+.. ...+.+++.|++| .+.|+||++|++.+|+|+.|+++.+++.+++++++++.+...+.+++++. ...+
T Consensus 247 ~~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~ 319 (401)
T TIGR01879 247 AKRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIER----WMDE 319 (401)
T ss_pred HHhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEE----eecC
Confidence 54321 2357889999985 77999999999999999999999999999999999988777788888876 3456
Q ss_pred CCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013571 341 PATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIG 420 (440)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~ 420 (440)
+++..++++++.++++++++ |.++. ...+.++||+++|....|..+ .+||+.. ..+|++||+++++++.++
T Consensus 320 ~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v-~fgPg~~-----~~aH~~dE~v~~e~l~~~ 390 (401)
T TIGR01879 320 EPVPCSEELVAALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGM-IFIPSIN-----GISHNPAEWSNITDCAEG 390 (401)
T ss_pred CCcCCCHHHHHHHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEE-EEecCCC-----CCcCCCCccCCHHHHHHH
Confidence 77788999999999999876 76543 235788999999998744333 3665432 348999999999999999
Q ss_pred HHHHHHHHHHH
Q 013571 421 AALHAAVAISY 431 (440)
Q Consensus 421 ~~~~~~~~~~~ 431 (440)
+++|++++.++
T Consensus 391 ~~vl~~~i~~l 401 (401)
T TIGR01879 391 AKVLYLMVYQL 401 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999998763
No 57
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=2.2e-41 Score=339.71 Aligned_cols=348 Identities=14% Similarity=0.069 Sum_probs=248.5
Q ss_pred HHHHHHHHHHHhCCCCCcc------------hHHHHHHHHHHHHhCCCceeecCCCceEEEEEc-CCCCCEEEEEEeccc
Q 013571 55 EWMRRIRRRIHENPELGFE------------EYETSQLVRSELDSLGIEYTWPVAKTGIVASVG-SGGEPWFGLRAEMDA 121 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~-~~~~~~i~~~~H~D~ 121 (440)
+++++++++|++|||++.+ +.++++|+.++|+++|++++.. .|+.+... ++..|+|+|+||+||
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~l~l~gH~D~ 78 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENV---DNYAGYAEYGQGEEYLGILGHLDV 78 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEe---cCceEEEEeCCCCCeEEEEeecCC
Confidence 5788999999999999832 3689999999999999998742 23333321 223489999999999
Q ss_pred CCCCC-CCCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCC-
Q 013571 122 LPLQE-MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVD- 194 (440)
Q Consensus 122 vp~~~-~~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~- 194 (440)
||+++ |...||.. +++|++|||| |||++++++.|++.|++.+.+++++|.|+|++|||.+ .|+.++++.....
T Consensus 79 Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~ 158 (447)
T TIGR01887 79 VPAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEAPD 158 (447)
T ss_pred CCCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCCCC
Confidence 99865 44557774 5689999999 6899999999999999988788999999999999954 5888887763321
Q ss_pred ---CCCE---EEEeccC----------------------CCCCCCccccc--CCCccc-------------------cee
Q 013571 195 ---KFQG---MFGIHIS----------------------PVLPTGTVGSR--PGPLLA-------------------GSG 225 (440)
Q Consensus 195 ---~~d~---~~~~~~~----------------------~~~~~g~~~~~--~g~~~~-------------------g~~ 225 (440)
..|. ++..+++ .+.+++.+... ....++ |..
T Consensus 159 ~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~~ 238 (447)
T TIGR01887 159 IGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGSF 238 (447)
T ss_pred EEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceEE
Confidence 1121 2222211 13343332100 001112 444
Q ss_pred -----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH--Hhhcc---------------------cCC-CCCCeEEEE
Q 013571 226 -----RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQ--HIVSR---------------------ETD-PLEARVVTV 276 (440)
Q Consensus 226 -----~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~--~~~~~---------------------~~~-~~~~~t~~~ 276 (440)
+++|+++|+++|+|+|+.|.|||+.+++++.++. +...+ ..+ ..+.+++|+
T Consensus 239 ~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~nv 318 (447)
T TIGR01887 239 EVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMNV 318 (447)
T ss_pred EecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEEE
Confidence 7999999999999999999999999999999986 22100 001 124678999
Q ss_pred EEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHH
Q 013571 277 GFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRV 356 (440)
Q Consensus 277 ~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (440)
+.|++| .|+.|++.+|+|+.|+++.+++.+++.+.+. +. .++... ....++ ..+.++++++.+.++
T Consensus 319 g~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~~-~~~~p~-~~~~~~~lv~~l~~~ 384 (447)
T TIGR01887 319 GVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTEN-GYLKPL-YVPKDDPLVQTLMKV 384 (447)
T ss_pred EEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEEc-cCCCCe-EECCCCHHHHHHHHH
Confidence 999988 3899999999999999999987777764432 21 222221 001111 235578999999999
Q ss_pred HHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 013571 357 GASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVA 428 (440)
Q Consensus 357 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~ 428 (440)
+++.+|.++. +....|+||++++ |.+ +.+||..+ |++.++|++||+|++++|..++++|..++
T Consensus 385 ~~~~~g~~~~--~~~~~ggtda~~~----~~~-i~~Gp~~p--G~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 385 YEKQTGDEGT--PVAIGGGTYARLM----ENG-VAFGALFP--GEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHHhCCCCC--eeEecchhhhhhC----CCc-EEeCCCCC--CCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 9999887543 2356778887765 332 44676532 44667999999999999999999998763
No 58
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=1.1e-40 Score=336.23 Aligned_cols=343 Identities=13% Similarity=0.118 Sum_probs=259.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC----CCCEEEEEEecccCCCCC----
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG----GEPWFGLRAEMDALPLQE---- 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~----~~~~i~~~~H~D~vp~~~---- 126 (440)
+++++++++|++|||+|++|.++++|+.++++++|++++.+. ..|+++++++. ..|+|+|.||+||||+++
T Consensus 10 ~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d~-~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~ 88 (485)
T PRK15026 10 QPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQ-VGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTV 88 (485)
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEe-cCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCcc
Confidence 678999999999999999999999999999999999988654 35788887532 348999999999999854
Q ss_pred --CCCCccc-ccCCCcccccc------hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCC
Q 013571 127 --MVEWEHK-SKNNGKMHGCG------HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKF 196 (440)
Q Consensus 127 --~~~~~~~-~~~~g~i~GrG------~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~ 196 (440)
|..+||. .+++|++|||| ||++++++|.++ ++.+. ++++|.++|++|||.+ .|++.+.. .. ...
T Consensus 89 ~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~~ 162 (485)
T PRK15026 89 HDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQA 162 (485)
T ss_pred ccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CCc
Confidence 3345776 35688999988 356788777665 44443 4789999999999954 69998855 33 357
Q ss_pred CEEEEeccCCCCCCCccc-ccCC-------------CcccceeEEEEEEEe-cCCCCC-CCCCCC-CHHHHHHHHHHHHH
Q 013571 197 QGMFGIHISPVLPTGTVG-SRPG-------------PLLAGSGRFTAVIKG-KGGHAA-MPQDTR-DPVLAASFAILTLQ 259 (440)
Q Consensus 197 d~~~~~~~~~~~~~g~~~-~~~g-------------~~~~g~~~~~i~v~G-~~~Hss-~p~~g~-nAi~~~~~~i~~l~ 259 (440)
+++++++++ ..|.+. ...| ...+|..+++|+++| ++|||+ .|+.|. |||..|++++.++.
T Consensus 163 ~~~i~~e~~---~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~ 239 (485)
T PRK15026 163 DILINTDSE---EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHA 239 (485)
T ss_pred CEEEEeCCC---CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhH
Confidence 999998864 223221 1111 112577899999999 999999 799999 99999999999954
Q ss_pred HhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHH-------------------
Q 013571 260 HIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQ------------------- 320 (440)
Q Consensus 260 ~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~------------------- 320 (440)
+ ..+++++.|+||++.|+||++|++.+++|....+..+.+.+.+++.+.+.
T Consensus 240 ~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (485)
T PRK15026 240 E----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDK 309 (485)
T ss_pred h----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccc
Confidence 2 25789999999999999999999999999876555555555444443311
Q ss_pred -------------------------------------------------------------------------HHHcCCe
Q 013571 321 -------------------------------------------------------------------------AAVHQCS 327 (440)
Q Consensus 321 -------------------------------------------------------------------------~~~~~~~ 327 (440)
+..+|.+
T Consensus 310 ~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~ 389 (485)
T PRK15026 310 AALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAK 389 (485)
T ss_pred cccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcE
Confidence 1111221
Q ss_pred EEEEEeccccCCCCCc--CCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccc-eEEEccCCCCCCCCCC
Q 013571 328 ATIDFLEEKMRHYPAT--VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAA-HFYVGTRNETLKPFIR 404 (440)
Q Consensus 328 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v-~~~~G~~~~~~g~~~~ 404 (440)
+++ ...+|+. +.++++++.+.++|++++|.++. +...++++|++.|.+..|.+ ++.+||...+
T Consensus 390 ~~~------~~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~~--~~~ihaglEcG~~~~~~p~i~~VsfGP~~~~------ 455 (485)
T PRK15026 390 TEA------KGAYPGWQPDANSPVMHLVRETYQRLFNKTPN--IQIIHAGLECGLFKKPYPEMDMVSIGPTITG------ 455 (485)
T ss_pred EEE------eCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEEEehHHHHHhhCCCCCEEEECCCCCC------
Confidence 111 2335554 44689999999999999998663 35788999999999876653 4568987543
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 405 LHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 405 ~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
+|++||+++++++....+++..++.++
T Consensus 456 ~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 456 PHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred CCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 999999999999988777777777776
No 59
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=7.8e-40 Score=325.37 Aligned_cols=342 Identities=16% Similarity=0.158 Sum_probs=268.0
Q ss_pred HHHHHHHHHHHhCC----------CCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC--CCCEEEEEEecccC
Q 013571 55 EWMRRIRRRIHENP----------ELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG--GEPWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~p----------s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~--~~~~i~~~~H~D~v 122 (440)
+++++.+.+|-+|- +.|.++.++++|+.+|++++|+++++|..+ |++++++|. +.|+|++.+|+|||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D~~g-N~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFDDVG-NLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEcCCC-cEEEEecCCCCCCCeEEEeccccCC
Confidence 44555555555551 224567889999999999999999876654 699999875 34899999999999
Q ss_pred CCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHHH-------
Q 013571 123 PLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIK------- 189 (440)
Q Consensus 123 p~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~~------- 189 (440)
|.+ |+. +...|+++.|++++.|++++.+++++|.++++.+||++ .|++.+..
T Consensus 82 ~~g------------G~~---dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNG------------GNL---DGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCC------------Ccc---CchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 964 332 12468999999999999999999999999999999973 47766651
Q ss_pred -----------------cCC--------CCCCCEEEEeccCCC-------CCCCcccccCCCcccceeEEEEEEEecCCC
Q 013571 190 -----------------EGA--------VDKFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVIKGKGGH 237 (440)
Q Consensus 190 -----------------~~~--------~~~~d~~~~~~~~~~-------~~~g~~~~~~g~~~~g~~~~~i~v~G~~~H 237 (440)
.|+ ..++++.+.+|.+.+ .+.|.+ ..++|..+++|+++|+++|
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~igiv-----~~~~G~~~~~v~v~GkaaH 221 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQSIGVV-----NAIVGQRRYTVNLKGEANH 221 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCeEEEE-----eecccceEEEEEEEEECCC
Confidence 111 014567777886433 222222 3457999999999999999
Q ss_pred CCCCCC--CCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEec-CCcccccccceEEEEEEecCChhhHHHHHHHHH
Q 013571 238 AAMPQD--TRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDA-GQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIK 314 (440)
Q Consensus 238 ss~p~~--g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~g-G~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~ 314 (440)
+|.|+. +.||+..+++++..+++...+. ....+++++.|++ |.+.|+||++|++++|+|..+.++.+.+.++++
T Consensus 222 ag~~p~~~r~dAi~aaa~~i~~l~~~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~ 298 (406)
T TIGR03176 222 AGTTPMSYRRDTVYAFSRICTQSIERAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELE 298 (406)
T ss_pred CCCCCcccccCHHHHHHHHHHHHHHHHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHH
Confidence 997654 4899999999999998865322 2345899999994 789999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEcc
Q 013571 315 EVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGT 394 (440)
Q Consensus 315 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~ 394 (440)
+.+++.+..++++++++. ....++...++++++.+.+++++. +.... ...+.+++|+++|.+.+|+++++.|.
T Consensus 299 ~~i~~ia~~~g~~~ei~~----~~~~~p~~~d~~lv~~l~~a~~~~-~~~~~--~~~sggg~Da~~~~~~vP~~~ifgp~ 371 (406)
T TIGR03176 299 NDMKAIADEMDITIDIDL----WMDEAPVPMNKEIVAIIEQLAKAE-KLNYR--LMHSGAGHDAQIFAPRVPTAMIFVPS 371 (406)
T ss_pred HHHHHHHHHcCCeEEEEE----EecCCCCCCCHHHHHHHHHHHHHc-CCCce--ecCcccHHHHHHHHHHCCEEEEEEeC
Confidence 999999888888888765 223344566899999999999987 44332 24677899999999889987655443
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 395 RNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 395 ~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
.+. ..|++||+++++++..++++|+.++.+++.
T Consensus 372 ~~g------~~H~p~E~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 372 IGG------ISHNPAERTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred CCC------CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 322 389999999999999999999999999875
No 60
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=1.9e-40 Score=332.42 Aligned_cols=357 Identities=20% Similarity=0.188 Sum_probs=255.2
Q ss_pred HHHHHHHHHHhCCCCCcc------hHHHHHHHHHHHHhCCCceee--cCCCceEEEEEcCCCCCEEEEEEecccCCCCC-
Q 013571 56 WMRRIRRRIHENPELGFE------EYETSQLVRSELDSLGIEYTW--PVAKTGIVASVGSGGEPWFGLRAEMDALPLQE- 126 (440)
Q Consensus 56 ~~~~~~~~l~~~ps~s~~------e~~~~~~l~~~l~~~G~~~~~--~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~- 126 (440)
++++++++|++|||++.. +.++++|+.++|+++||+++. ..+++|+++.++++ .+.|+|+||+||||+++
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~~ 80 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNPE 80 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCcc
Confidence 467889999999998753 478999999999999999864 23457899998533 37899999999999864
Q ss_pred -CCCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCC--CCCCCE
Q 013571 127 -MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGA--VDKFQG 198 (440)
Q Consensus 127 -~~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~--~~~~d~ 198 (440)
|..+||.. +++|++|||| |||+++++|+|+++|++.+ ++++|.|+|++|||.+ .++..+++... ...+|+
T Consensus 81 ~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~--~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~ 158 (438)
T PRK08554 81 EWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEP--LNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPKY 158 (438)
T ss_pred ccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEcccccCccccHHHHHHHHhcCCCCCE
Confidence 55667874 5689999999 7999999999999998753 6789999999999954 34456554311 125789
Q ss_pred EEEeccCCCCCCCcccccCCCc-----------ccce---eEEEEEEEecC-CCCCCCCCCCC--HHHHHHHHHHHHHHh
Q 013571 199 MFGIHISPVLPTGTVGSRPGPL-----------LAGS---GRFTAVIKGKG-GHAAMPQDTRD--PVLAASFAILTLQHI 261 (440)
Q Consensus 199 ~~~~~~~~~~~~g~~~~~~g~~-----------~~g~---~~~~i~v~G~~-~Hss~p~~g~n--Ai~~~~~~i~~l~~~ 261 (440)
+++.++....+ .+..+.|.. ..|. .++.+++.|.+ +|++.+..|.| |+..+++++.++..+
T Consensus 159 ~iv~Ept~~~~--~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~~ 236 (438)
T PRK08554 159 MINADGIGMKP--IIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNVL 236 (438)
T ss_pred EEEeCCCCCcc--hhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCce
Confidence 99877643221 111221111 0122 34555566665 99998766665 577887777766533
Q ss_pred hccc----C--C-CCCCeEEEEEEEecCC-----------------------------------ccccc---ccceEEEE
Q 013571 262 VSRE----T--D-PLEARVVTVGFIDAGQ-----------------------------------AGNII---PEIVRFGG 296 (440)
Q Consensus 262 ~~~~----~--~-~~~~~t~~~~~i~gG~-----------------------------------~~n~i---P~~a~~~~ 296 (440)
.... . + .....++++....+|. ..|++ |++|++++
T Consensus 237 ~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~ 316 (438)
T PRK08554 237 AVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKL 316 (438)
T ss_pred EEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEEE
Confidence 1000 0 0 1112233333323343 45666 99999999
Q ss_pred EEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccc
Q 013571 297 TFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAE 376 (440)
Q Consensus 297 ~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~t 376 (440)
|+|+.| .+.+++.++|+++++.. ..+++++++... ..+.+.++.++++++.+++++++. |.++. +...+|+|
T Consensus 317 DiR~~~-~~~e~v~~~i~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~lv~~~~~~~~~~-g~~~~--~~~~~Ggt 388 (438)
T PRK08554 317 DIRAMS-YSKEDIERTLKEVLEFN--LPEAEVEIRTNE--KAGYLFTPPDEEIVKVALRVLKEL-GEDAE--PVEGPGAS 388 (438)
T ss_pred EEEecC-CCHHHHHHHHHHHhhcc--CCCceEEEEecc--CCCCcCCCCChHHHHHHHHHHHHh-CCCcE--EEecCCch
Confidence 999988 68899999999988643 134556665421 234445567899999999999885 87543 35788999
Q ss_pred cHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 377 DFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 377 D~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
|+++++.. +|++. +||+.. .+|++|||++++++.+++++|.+++.+|++
T Consensus 389 Da~~~~~~Gip~v~--~Gp~~~------~~H~~~E~v~i~~l~~~~~i~~~~i~~l~~ 438 (438)
T PRK08554 389 DSRYFTPYGVKAID--FGPKGG------NIHGPNEYVEIDSLKKMPEVYKRIALRLLG 438 (438)
T ss_pred HHHHHHhcCCCceE--ECCCCC------CCCCCcceEEHHHHHHHHHHHHHHHHHHhC
Confidence 99999887 99876 677543 389999999999999999999999988863
No 61
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=333.80 Aligned_cols=346 Identities=17% Similarity=0.192 Sum_probs=276.5
Q ss_pred hHHHHHHHHHHHHhCCCC-------------CcchHHHHHHHHHHHHhCCCc-eeecCCCceEEEEEcCC--CCCEEEEE
Q 013571 53 FFEWMRRIRRRIHENPEL-------------GFEEYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSG--GEPWFGLR 116 (440)
Q Consensus 53 ~~~~~~~~~~~l~~~ps~-------------s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nv~~~~~~~--~~~~i~~~ 116 (440)
+.+++++.+.+|-+|+.+ |.++.++++|+.+||+++|++ ++.+.. .|++|+++|. +.|+|++.
T Consensus 179 ~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~~-gNv~~~~~g~~~~~p~v~~g 257 (591)
T PRK13799 179 IGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDAV-GNVVGRYKAADDDAKTLITG 257 (591)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECCC-CCEEEEcCCCCCCCCeEEEe
Confidence 446777888888888631 234578999999999999998 987655 5699999764 36999999
Q ss_pred EecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHH--
Q 013571 117 AEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMI-- 188 (440)
Q Consensus 117 ~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~-- 188 (440)
+|+||||. +|+.+|+ .|+++.|++++.|++.+.+++++|.|++..|||+. .|++.+.
T Consensus 258 SHlDTV~~------------gG~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~ 322 (591)
T PRK13799 258 SHYDTVRN------------GGKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGD 322 (591)
T ss_pred ccccccCC------------CCccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCC
Confidence 99999985 3887776 78999999999999999999999999999999972 3666664
Q ss_pred ------H----cCC---------------C-------CCCCEEEEeccCCC-------CCCCcccccCCCcccceeEEEE
Q 013571 189 ------K----EGA---------------V-------DKFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTA 229 (440)
Q Consensus 189 ------~----~~~---------------~-------~~~d~~~~~~~~~~-------~~~g~~~~~~g~~~~g~~~~~i 229 (440)
+ +|. . .++++.+.+|.+.+ .+.|.+ ..++|..+++|
T Consensus 323 ~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV-----~g~~G~~~~~I 397 (591)
T PRK13799 323 FNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGIV-----TSIAGSARYIC 397 (591)
T ss_pred ChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEEE-----eeeccceEEEE
Confidence 1 121 0 14556777776654 344443 23579999999
Q ss_pred EEEecCCCCCC-CC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEec-CCcccccccceEEEEEEecCChhhH
Q 013571 230 VIKGKGGHAAM-PQ-DTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDA-GQAGNIIPEIVRFGGTFRSLTTEGL 306 (440)
Q Consensus 230 ~v~G~~~Hss~-p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~g-G~~~n~iP~~a~~~~~~R~~~~~~~ 306 (440)
+++|+++|+|. |. .+.||+..+++++..++++..+. +....+.+++.|++ +.+.|+||++|++++|+|..+.++.
T Consensus 398 tv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~ 475 (591)
T PRK13799 398 EFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIR 475 (591)
T ss_pred EEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHH
Confidence 99999999996 53 58999999999999999875432 22335788899986 3489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhc
Q 013571 307 LYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMP 386 (440)
Q Consensus 307 ~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p 386 (440)
+.+.+++++.+++.++.++++++++. ....+++..++++++.+.++.++. |.+.. ...+++++|+++|.+..|
T Consensus 476 e~l~~~i~~~i~~ia~~~g~~~ei~~----~~~~~~~~~d~~lv~~~~~a~~~~-G~~~~--~~~sgag~Da~~~a~~~p 548 (591)
T PRK13799 476 DAAVADILAEIAAIAARRGIEYKAEL----AMKAAAAPCAPELMKQLEAATDAA-GVPLF--ELASGAGHDAMKIAEIMD 548 (591)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEE----EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCcchHHHHHHHHhhCC
Confidence 99999999999999888888888776 345667788899999999988875 87542 246788999999999877
Q ss_pred cceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 387 AAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 387 ~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
..+++.|+++. ...|++||+++++++..++++|..++..+.+
T Consensus 549 ~amif~~~g~~-----g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 549 QAMLFTRCGNA-----GISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred EEEEEEecCCC-----CCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 66666554432 1379999999999999999999999998754
No 62
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.8e-38 Score=328.32 Aligned_cols=343 Identities=18% Similarity=0.189 Sum_probs=270.6
Q ss_pred HHHHHHHHHHHhCCCC-------------CcchHHHHHHHHHHHHhCCC-ceeecCCCceEEEEEcCC-C-CCEEEEEEe
Q 013571 55 EWMRRIRRRIHENPEL-------------GFEEYETSQLVRSELDSLGI-EYTWPVAKTGIVASVGSG-G-EPWFGLRAE 118 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~-------------s~~e~~~~~~l~~~l~~~G~-~~~~~~~~~nv~~~~~~~-~-~~~i~~~~H 118 (440)
+++.+.+.+|-+|+.+ |.++.++++|+.+||+++|+ +++.+.. .|++++++|. + .|+|++.+|
T Consensus 181 ~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D~~-GNl~~~~~g~~~~~~~v~~gsH 259 (591)
T PRK13590 181 NDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHIDAV-GNVVGRYKGSTPQAKRLLTGSH 259 (591)
T ss_pred HHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeECCC-CCEEEEecCCCCCCCeEEEecc
Confidence 6677778888887652 33457899999999999999 8876654 6699999764 3 489999999
Q ss_pred cccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHH------
Q 013571 119 MDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYY------ 186 (440)
Q Consensus 119 ~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~------ 186 (440)
+||||.+ |+.+| ++|++++|++++.|++.+..++++|.|+++.|||++ .|++.
T Consensus 260 lDTV~~g------------G~~DG---~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~ 324 (591)
T PRK13590 260 YDTVRNG------------GKYDG---RLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFD 324 (591)
T ss_pred cccCCCC------------CCccc---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCCCh
Confidence 9999853 55543 489999999999999999888999999999999962 36664
Q ss_pred --HHH---------------cCC-----------CCCCCEEEEeccCCC-------CCCCcccccCCCcccceeEEEEEE
Q 013571 187 --MIK---------------EGA-----------VDKFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVI 231 (440)
Q Consensus 187 --l~~---------------~~~-----------~~~~d~~~~~~~~~~-------~~~g~~~~~~g~~~~g~~~~~i~v 231 (440)
+++ .|+ .+++.+.+.+|.+++ .+.|.+ ..++|..+++|++
T Consensus 325 ~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV-----~~~~G~~~~~v~v 399 (591)
T PRK13590 325 PAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIV-----TSINGSVRYVGEM 399 (591)
T ss_pred HHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEEE-----eeeeccEEEEEEE
Confidence 222 111 013556777776654 123333 2357999999999
Q ss_pred EecCCCCCC-CCC-CCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEec-CCcccccccceEEEEEEecCChhhHHH
Q 013571 232 KGKGGHAAM-PQD-TRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDA-GQAGNIIPEIVRFGGTFRSLTTEGLLY 308 (440)
Q Consensus 232 ~G~~~Hss~-p~~-g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~g-G~~~n~iP~~a~~~~~~R~~~~~~~~~ 308 (440)
+|+++|+|. |.. +.||+..+++++..+++.... ....+.+++.|++ |.+.|+||++|++++|+|..+.++.+.
T Consensus 400 ~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~ 475 (591)
T PRK13590 400 IGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDA 475 (591)
T ss_pred EeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHH
Confidence 999999996 543 789999999999999886432 1234678999884 668999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccc
Q 013571 309 LEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAA 388 (440)
Q Consensus 309 v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v 388 (440)
+.+++++.+++.+..++++++++. ...+++...++++++.+.+++++. |.+.. ...+++++|+++|.+.+|.+
T Consensus 476 v~~~i~~~i~~ia~~~g~~vei~~----~~~~~~~~~d~~lv~~~~~aa~~~-G~~~~--~~~sggg~Da~~~a~~~p~~ 548 (591)
T PRK13590 476 MVADVLAELEAICERRGLRYTLEE----TMRAAAAPSAPAWQQRWEAAVAAL-GLPLF--RMPSGAGHDAMKLHEIMPQA 548 (591)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEE----eecCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCcchhHHHHHHHHHCCEE
Confidence 999999999999888899888876 345667788999999999999885 87543 24678999999999987755
Q ss_pred eEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 389 HFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 389 ~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
++ +||+... ...|++||+++++++..++++|..++..++..
T Consensus 549 mi-fgpg~~~----g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~~ 589 (591)
T PRK13590 549 ML-FVRGENA----GISHNPLESSTADDMQLAVQAFQHLLDQLAAE 589 (591)
T ss_pred EE-EEeeCCC----CCCCCCccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 43 4433210 23899999999999999999999999988754
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-32 Score=256.11 Aligned_cols=377 Identities=16% Similarity=0.121 Sum_probs=274.4
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcch------HHHHHHHHHHHHhCCCceeec-------------CCCceE
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEE------YETSQLVRSELDSLGIEYTWP-------------VAKTGI 101 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e------~~~~~~l~~~l~~~G~~~~~~-------------~~~~nv 101 (440)
..++.+.++.++ +++++.|++.++|+|+|... .++++|+++.|+++|-+++.. ...+-+
T Consensus 4 l~~~fq~id~~~--de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvv 81 (473)
T KOG2276|consen 4 LTKVFQSIDLNK--DEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVV 81 (473)
T ss_pred HHHHHHHhhccH--HHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhh
Confidence 456778889888 99999999999999998754 578999999999999766541 123446
Q ss_pred EEEEcCCC-CCEEEEEEecccCCCCCCCCC---ccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEE
Q 013571 102 VASVGSGG-EPWFGLRAEMDALPLQEMVEW---EHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLV 173 (440)
Q Consensus 102 ~~~~~~~~-~~~i~~~~H~D~vp~~~~~~~---~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~ 173 (440)
+++++..+ +++++++|||||+|++..++| ||. +.++|+++||| +||++++.+.+++++++.|+.++-||.|+
T Consensus 82 l~~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~ 161 (473)
T KOG2276|consen 82 LGVLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFV 161 (473)
T ss_pred hhcccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEE
Confidence 77776654 489999999999999766666 565 56789999999 47999999999999999999999999999
Q ss_pred EeccCCcc-cchHHHHH---cCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEe--cCCCCCCC-CCCCC
Q 013571 174 FQPGEEGY-GGAYYMIK---EGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKG--KGGHAAMP-QDTRD 246 (440)
Q Consensus 174 ~~~dEE~~-~G~~~l~~---~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G--~~~Hss~p-~~g~n 246 (440)
|.+-||.| .|-..+++ +.++.++|++.+.+.-+ ..+..-+...| .+|...+.|+|.| +..||+.. ..-.-
T Consensus 162 ~EgmEEsgS~~L~~l~~~~kD~~~~~vD~vciSdnyW-lg~kkPcltyG--lRG~~yf~i~v~g~~~DlHSGvfGG~~hE 238 (473)
T KOG2276|consen 162 FEGMEESGSEGLDELIEKEKDKFFKDVDFVCISDNYW-LGTKKPCLTYG--LRGVIYFQIEVEGPSKDLHSGVFGGVVHE 238 (473)
T ss_pred EEechhccCccHHHHHHHHhhhhhccCCEEEeeCcee-ccCCCcccccc--cccceeEEEEEeecccccccccccchhHH
Confidence 99999954 46666654 34567899888755322 11111122222 3588999999999 77999953 12235
Q ss_pred HHHHHHHHHHHHHHhhcc------------c----------------------------CC--------CCCCeEEEEEE
Q 013571 247 PVLAASFAILTLQHIVSR------------E----------------------------TD--------PLEARVVTVGF 278 (440)
Q Consensus 247 Ai~~~~~~i~~l~~~~~~------------~----------------------------~~--------~~~~~t~~~~~ 278 (440)
|+..|..++..|.+...+ . ++ ....++.++..
T Consensus 239 ~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihg 318 (473)
T KOG2276|consen 239 AMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHG 318 (473)
T ss_pred HHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceec
Confidence 566666666665321100 0 00 01245566666
Q ss_pred Eec----CCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEEeccccCCCCCcCCCHHHHHH
Q 013571 279 IDA----GQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQC--SATIDFLEEKMRHYPATVNDEKMYEH 352 (440)
Q Consensus 279 i~g----G~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (440)
|.| ..+..+||..+.-+|.+|+.|.++.+.+.+.+.+.++...++.+. +.+++.... ..++ ..+++++-+.+
T Consensus 319 IeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~~-~~~W-v~d~~~~~y~a 396 (473)
T KOG2276|consen 319 IEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMGHA-GAPW-VSDPDDPHYLA 396 (473)
T ss_pred ccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeecCC-CCce-ecCCCchhHHH
Confidence 654 467889999999999999999999999999999999888766553 455555211 2222 23567888999
Q ss_pred HHHHHHhhcCCCCcccCCCCcccccHHH-HHHH--hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013571 353 GKRVGASMVGEPNVHLTPVEMGAEDFSF-YTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAI 429 (440)
Q Consensus 353 ~~~~~~~~~g~~~~~~~~~~~g~tD~~~-~~~~--~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~ 429 (440)
++++++.++|.++- ....+|+-.... |.+. .+.+...+|..++ .+|+.||++++.++.++.+++++.+.
T Consensus 397 ~krA~~~v~gvePd--~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~dD------~aHsqNEkl~i~N~~~G~k~l~ay~~ 468 (473)
T KOG2276|consen 397 LKRAIETVYGVEPD--FTREGGSIPVTLTFQDITGKSVLLLPYGASDD------GAHSQNEKLNITNYVEGTKVLAAYIS 468 (473)
T ss_pred HHHHHHHhhCCCCC--ccccCCccceehHHHHHhCCCeEEeccccccc------chhhhcccccHHHHhhhHHHHHHHHH
Confidence 99999999998763 234455555443 4444 3444544554444 49999999999999999999999998
Q ss_pred HHh
Q 013571 430 SYL 432 (440)
Q Consensus 430 ~~~ 432 (440)
++.
T Consensus 469 el~ 471 (473)
T KOG2276|consen 469 ELA 471 (473)
T ss_pred HHh
Confidence 874
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.93 E-value=4.9e-25 Score=213.87 Aligned_cols=349 Identities=17% Similarity=0.163 Sum_probs=268.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCce-ee-------cCCC--c-eEEEEEcCC-C-CCEEEEEEeccc
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEY-TW-------PVAK--T-GIVASVGSG-G-EPWFGLRAEMDA 121 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~-~~-------~~~~--~-nv~~~~~~~-~-~~~i~~~~H~D~ 121 (440)
+++++.+.++++||+.|.+|.+.+.++.+|++.+|+.+ .+ .... . -+.+++++. + -|.+.|.+|+||
T Consensus 5 ~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt 84 (414)
T COG2195 5 ERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDT 84 (414)
T ss_pred HHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccccccc
Confidence 78889999999999999999999999999999999988 32 1111 2 255567664 2 388999999999
Q ss_pred CCC-------CCC---------------------CCCc----ccc----cCCC-cccccchhHHHHHHHHHHHHHHhcc-
Q 013571 122 LPL-------QEM---------------------VEWE----HKS----KNNG-KMHGCGHDVHTTILLGAARLLKHRM- 163 (440)
Q Consensus 122 vp~-------~~~---------------------~~~~----~~~----~~~g-~i~GrG~k~~~a~~l~a~~~l~~~~- 163 (440)
+|. +++ ...| +.. ..+| .+-|-++|+|++.++.++..+++..
T Consensus 85 ~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~ 164 (414)
T COG2195 85 VPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHP 164 (414)
T ss_pred cccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCc
Confidence 962 100 0011 110 0123 3456667899999999999999652
Q ss_pred cCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCC-C
Q 013571 164 DRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM-P 241 (440)
Q Consensus 164 ~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~-p 241 (440)
..+.+++.+.|++|||.+ .|+..+.-. .| .+++.+.++ |.+.|.+.... .+...+++++.|+..|++. +
T Consensus 165 ~i~h~~i~~g~s~~Ee~g~rg~~~~~~a-~f-~a~~ay~iD---Gg~~g~i~~ea----~~~~~~~~~~~g~~~h~~~a~ 235 (414)
T COG2195 165 EIPHGGIRGGFSPDEEIGGRGAANKDVA-RF-LADFAYTLD---GGPVGEIPREA----FNAAAVRATIVGPNVHPGSAK 235 (414)
T ss_pred cccccCeEEEecchHHhhhhhhhhccHH-hh-hcceeEecC---CCccCeeeeec----cchheeeeeeeccCcCccchH
Confidence 347899999999999955 787766433 12 356666666 45566665442 3567899999999999984 6
Q ss_pred CCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHH
Q 013571 242 QDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQA 321 (440)
Q Consensus 242 ~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~ 321 (440)
...+||+..+.+....+.... ....++.+.|..+++...|.|.+++.....+|.......+.....+++.+++.+
T Consensus 236 ~~~i~a~~~a~e~~~~~~~~~-----~~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~~ 310 (414)
T COG2195 236 GKMINALLLAAEFILELPLEE-----VPELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEMA 310 (414)
T ss_pred HHHhhHHHhhhhhhhcCCccc-----ccccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHHH
Confidence 678899998888888775331 123567778889999999999999999999999999999999999999999998
Q ss_pred HHcC--CeEEEEEeccccCCCCCc--CCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCC
Q 013571 322 AVHQ--CSATIDFLEEKMRHYPAT--VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRN 396 (440)
Q Consensus 322 ~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~ 396 (440)
++++ ..++++. ...||.. ..+++++..++++++++ +.++. .....|+||++.++.. .|+..++.|| .
T Consensus 311 ~~~g~~~~~~~~~----~~~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p~--v~~i~gGtd~~~is~~g~p~~~i~~Gp-~ 382 (414)
T COG2195 311 ASLGKLAGAELEV----KDSYPGWKIKPDSPLVDLAKKAYKEL-GIKPK--VKPIHGGTDGGVLSFKGLPTPNISTGP-G 382 (414)
T ss_pred HHhhhccceEEEE----eccccCcCCCCCchHHHHHHHHHHHh-CCCce--EEEeecccchhhhhccCCCCceEeccc-c
Confidence 8888 6677766 4566554 44688999999999999 55454 3589999999999988 8888889998 5
Q ss_pred CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 397 ETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 397 ~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
.+ +|+++|+|++++++++..++..++..+
T Consensus 383 ~n------~Hs~~E~v~I~s~ek~~~~l~~l~~~~ 411 (414)
T COG2195 383 EN------PHSPDEFVSIESMEKAVQVLVELLKLA 411 (414)
T ss_pred cC------CCCccceeehHHHHHHHHHHHHHHHHh
Confidence 44 999999999999999999988887765
No 65
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.86 E-value=1.6e-21 Score=174.16 Aligned_cols=178 Identities=24% Similarity=0.272 Sum_probs=131.2
Q ss_pred EEEEecccCCC-CCCCCCccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCccc--chHH
Q 013571 114 GLRAEMDALPL-QEMVEWEHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYG--GAYY 186 (440)
Q Consensus 114 ~~~~H~D~vp~-~~~~~~~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~--G~~~ 186 (440)
+|++||||||. ..|...||. ..++|++|||| +|+++++++.+++.|++.+.+++++|.|+|++|||++. |++.
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~ 80 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKH 80 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHH
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhh
Confidence 68999999992 223334565 46789999999 47999999999999998888899999999999999654 9999
Q ss_pred HHHcCCC--CCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc
Q 013571 187 MIKEGAV--DKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR 264 (440)
Q Consensus 187 l~~~~~~--~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~ 264 (440)
+++++.. ..+|+++..++.. .+...
T Consensus 81 l~~~~~~~~~~~~~~~~~e~~~---------------~~~~~-------------------------------------- 107 (189)
T PF01546_consen 81 LLEEGAFFGLHPDYVIIGEPTG---------------KGGVG-------------------------------------- 107 (189)
T ss_dssp HHHHCEEEEEEESEEEECECET---------------TSEEE--------------------------------------
T ss_pred hhhhcccccccccccccccccc---------------ccccc--------------------------------------
Confidence 9987521 1355555533211 01000
Q ss_pred cCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcC
Q 013571 265 ETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATV 344 (440)
Q Consensus 265 ~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (440)
..
T Consensus 108 ------------------------------------------------------------------------------~~ 109 (189)
T PF01546_consen 108 ------------------------------------------------------------------------------SD 109 (189)
T ss_dssp ------------------------------------------------------------------------------HC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 34
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHH--HhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ--RMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAA 422 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~ 422 (440)
.++++++.+.++++++++... .+...+++||++++.. ..+....++||... .+|++||+++++++.++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~i~~G~~~~------~~H~~~E~i~~~~l~~~~~ 181 (189)
T PF01546_consen 110 NDPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGLGIPAIGFGPGGS------NAHTPDEYIDIEDLVKGAK 181 (189)
T ss_dssp TCHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHTTEEEEEEESCEE------STTSTT-EEEHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhccccceeeeCCCCC------CCCCCCcEecHHHHHHHHH
Confidence 577899999999999955222 2468889999999995 32223345776643 4999999999999999999
Q ss_pred HHHHHHHH
Q 013571 423 LHAAVAIS 430 (440)
Q Consensus 423 ~~~~~~~~ 430 (440)
+|++++.+
T Consensus 182 ~~~~~l~n 189 (189)
T PF01546_consen 182 IYAALLEN 189 (189)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99999864
No 66
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.73 E-value=3e-17 Score=133.34 Aligned_cols=104 Identities=23% Similarity=0.261 Sum_probs=94.7
Q ss_pred cccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-----CCCCCeEEEEEEEecCCcccccccceEE
Q 013571 220 LLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET-----DPLEARVVTVGFIDAGQAGNIIPEIVRF 294 (440)
Q Consensus 220 ~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~-----~~~~~~t~~~~~i~gG~~~n~iP~~a~~ 294 (440)
.++|..+++|+++|+++|+|.|+.|+||+..+++++.+|+++..+.. ......+++++.++||...|+||++|++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~ 81 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATL 81 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEE
T ss_pred cCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEE
Confidence 35799999999999999999999999999999999999998854332 4566799999999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHHHHHH
Q 013571 295 GGTFRSLTTEGLLYLEQRIKEVIEMQAAV 323 (440)
Q Consensus 295 ~~~~R~~~~~~~~~v~~~i~~~i~~~~~~ 323 (440)
++++|+.|.++.+++.+.+++.+++.+.+
T Consensus 82 ~~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 82 TVDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 99999999999999999999999987754
No 67
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.71 E-value=3.8e-16 Score=147.45 Aligned_cols=263 Identities=16% Similarity=0.095 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCcee------e-----cC-CCceEEEEEcCC-CCCEEEEEEec
Q 013571 55 EWMRRIRRRIHENPELGF--EEYETSQLVRSELDSLGIEYT------W-----PV-AKTGIVASVGSG-GEPWFGLRAEM 119 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~--~e~~~~~~l~~~l~~~G~~~~------~-----~~-~~~nv~~~~~~~-~~~~i~~~~H~ 119 (440)
+++.++..+|++.||+++ .|...+++|...|+++.+--+ . ++ ++.||+|-++|+ +..+|++.||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH~ 87 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGHF 87 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeecc
Confidence 788999999999999976 477889999999998865211 1 22 678999999774 55899999999
Q ss_pred ccCCCCCCCC------Cc------------c-c------ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEE
Q 013571 120 DALPLQEMVE------WE------------H-K------SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVK 171 (440)
Q Consensus 120 D~vp~~~~~~------~~------------~-~------~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~ 171 (440)
|||.+.+... .| + + -..++++.||| ||+|+|+.|++++.+.+. ...+|||.
T Consensus 88 DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNlL 166 (553)
T COG4187 88 DTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNLL 166 (553)
T ss_pred ceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcEE
Confidence 9998755321 22 1 0 01257899999 799999999999999987 46899999
Q ss_pred EEEeccCCc-ccchHHHHHc--CC--CCCCCEEEEeccCCCCC--CCcccccCCCcccceeEEEEEEEecCCCCCCCCCC
Q 013571 172 LVFQPGEEG-YGGAYYMIKE--GA--VDKFQGMFGIHISPVLP--TGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDT 244 (440)
Q Consensus 172 ~~~~~dEE~-~~G~~~l~~~--~~--~~~~d~~~~~~~~~~~~--~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g 244 (440)
|+.++|||. ..|++..+.. +. -.++++..++..+...+ .|.-....-.+..|.+---.-+.|...|.+.|..|
T Consensus 167 f~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~~f~G 246 (553)
T COG4187 167 FMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGYPFEG 246 (553)
T ss_pred EEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCCcccC
Confidence 999999994 5677765431 00 01445544444332222 22111000112235555566789999999999999
Q ss_pred CCHHHHHHHHHHHHHHh---hcccCCCC-CCeEEEEEEEecCCcccc-cccceEEEEEEecCChhhHHHHHHHHHHHHHH
Q 013571 245 RDPVLAASFAILTLQHI---VSRETDPL-EARVVTVGFIDAGQAGNI-IPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEM 319 (440)
Q Consensus 245 ~nAi~~~~~~i~~l~~~---~~~~~~~~-~~~t~~~~~i~gG~~~n~-iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~ 319 (440)
+||-..++++..+|+-. .++..... .++++ +-.-.--.+-|| .|.++.+.||+=+. ..+..++.+++++.+++
T Consensus 247 vnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~-L~qkDlKe~Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~~~a~~ 324 (553)
T COG4187 247 VNANFMASEITRRLELNADLADRVDGEITPPPSC-LEQKDLKESYNVQTPERAWLYFNWLYH-SRTAKELFDRLKEEAET 324 (553)
T ss_pred CCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHh-hhhhhhhhhccccCcchhhhhheehhh-cCCHHHHHHHHHHHHHH
Confidence 99999999999999633 22221111 11111 100011122333 58889999998665 44555555555555444
Q ss_pred H
Q 013571 320 Q 320 (440)
Q Consensus 320 ~ 320 (440)
.
T Consensus 325 A 325 (553)
T COG4187 325 A 325 (553)
T ss_pred H
Confidence 3
No 68
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.67 E-value=1.6e-15 Score=144.17 Aligned_cols=131 Identities=18% Similarity=0.180 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec-------------------CCCceEEEEEcCCCCCEEEE
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP-------------------VAKTGIVASVGSGGEPWFGL 115 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~-------------------~~~~nv~~~~~~~~~~~i~~ 115 (440)
+.+..+...+-.+++.|..|.++++||.++|+++|++++.. ..+.||+++++|...+.|++
T Consensus 35 ~~~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill 114 (346)
T PRK10199 35 TQARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIII 114 (346)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEE
Confidence 44555566677888999999999999999999999987531 12367999998765589999
Q ss_pred EEecccCCCCCCCCCcccccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHc
Q 013571 116 RAEMDALPLQEMVEWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKE 190 (440)
Q Consensus 116 ~~H~D~vp~~~~~~~~~~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~ 190 (440)
.||||||+.....++++.. +| ++++| ++++++++|++++.|++.+ ++++|.|+++++||. ..|+++++++
T Consensus 115 ~AH~DTV~p~~~~~~~~~~--~g-~~~~GA~DnasGvA~lLe~ar~l~~~~--~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 115 MAHLDTYAPQSDADVDANL--GG-LTLQGMDDNAAGLGVMLELAERLKNVP--TEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred EEEcCcCCCCCCCccccCC--CC-cccCCccccHHHHHHHHHHHHHHhhCC--CCCcEEEEEECCcccCcHHHHHHHHh
Confidence 9999999643333333332 22 67777 4689999999999998653 778999999999995 4699999886
No 69
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.66 E-value=1.8e-14 Score=139.03 Aligned_cols=129 Identities=20% Similarity=0.224 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-CCCEEEEEEecccCCC-----CCC-
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGLRAEMDALPL-----QEM- 127 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~~~~i~~~~H~D~vp~-----~~~- 127 (440)
+.+++++++|+++|++|+.|.++++++.++|+++|++++.+ ...|+++.+.+. ++|+|+|.||+|+|+. .+.
T Consensus 3 ~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~D-~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G 81 (343)
T TIGR03106 3 DYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYELT-RRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNG 81 (343)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEC-CCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCC
Confidence 67889999999999999999999999999999999998865 567799998663 4589999999999965 110
Q ss_pred -------CCCc------------------------------------------cc-------------------------
Q 013571 128 -------VEWE------------------------------------------HK------------------------- 133 (440)
Q Consensus 128 -------~~~~------------------------------------------~~------------------------- 133 (440)
.+|+ ++
T Consensus 82 ~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd 161 (343)
T TIGR03106 82 RLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGD 161 (343)
T ss_pred eEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCC
Confidence 0010 00
Q ss_pred ---------ccCCCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccch
Q 013571 134 ---------SKNNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGA 184 (440)
Q Consensus 134 ---------~~~~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~ 184 (440)
...+|++|||+ ||+++++++++++.|++.+.+++.+|+++|+.+||.|.|+
T Consensus 162 ~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~ga 223 (343)
T TIGR03106 162 FVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSGA 223 (343)
T ss_pred EEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCccc
Confidence 00237888988 6899999999999999877778999999999999966653
No 70
>PRK09961 exoaminopeptidase; Provisional
Probab=99.63 E-value=2.3e-14 Score=138.79 Aligned_cols=248 Identities=16% Similarity=0.090 Sum_probs=165.4
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCC-----CC-C-----
Q 013571 59 RIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPL-----QE-M----- 127 (440)
Q Consensus 59 ~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~-----~~-~----- 127 (440)
+++++|+++|++|++|.++++++.++|+.+|++++.+ ...|+++++++.++|+|+|.||||+|+. .+ +
T Consensus 4 ~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~D-~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~~ 82 (344)
T PRK09961 4 SLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 82 (344)
T ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEEE
Confidence 5699999999999999999999999999999998765 5667999886654589999999999974 11 1
Q ss_pred --CCC-c------------------------------cc---------c--------c---------------CCCcccc
Q 013571 128 --VEW-E------------------------------HK---------S--------K---------------NNGKMHG 142 (440)
Q Consensus 128 --~~~-~------------------------------~~---------~--------~---------------~~g~i~G 142 (440)
.+| | +. . + .++++.|
T Consensus 83 ~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~g 162 (344)
T PRK09961 83 PVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 162 (344)
T ss_pred eCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEE
Confidence 011 1 00 0 0 0134555
Q ss_pred cc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCC
Q 013571 143 CG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGP 219 (440)
Q Consensus 143 rG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~ 219 (440)
+. +..++++++++++.+++. +++.+|+++|+..||.| .|++..... + .+|.+++++..+
T Consensus 163 kalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i-~pd~~I~vDv~~------------- 224 (344)
T PRK09961 163 KAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTAC------------- 224 (344)
T ss_pred eechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc--c-CCCEEEEEeccC-------------
Confidence 55 357999999999999765 47899999999999954 677766543 2 467777765210
Q ss_pred cccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEe
Q 013571 220 LLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFR 299 (440)
Q Consensus 220 ~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R 299 (440)
|.-.|....+ +...+.+
T Consensus 225 -----------------~~d~~~~~~~----------------------------~~~~lg~------------------ 241 (344)
T PRK09961 225 -----------------WAKNFDYGAA----------------------------NHRQIGN------------------ 241 (344)
T ss_pred -----------------CCCCCCCCCC----------------------------cccccCC------------------
Confidence 1111110000 0000111
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHH
Q 013571 300 SLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFS 379 (440)
Q Consensus 300 ~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 379 (440)
|.-+. . ... ....++++.+.+++++++. +.+.+.. ....++||++
T Consensus 242 -------------------------Gp~i~--~----~D~--~~i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~ggGTDa~ 286 (344)
T PRK09961 242 -------------------------GPMLV--L----SDK--SLIAPPKLTAWIETVAAEI-GIPLQAD-MFSNGGTDGG 286 (344)
T ss_pred -------------------------CceEE--E----ccC--CcCCCHHHHHHHHHHHHHc-CCCcEEE-ecCCCcchHH
Confidence 11111 1 101 1234677788888888776 6543321 2345689999
Q ss_pred HHHH--H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 380 FYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 380 ~~~~--~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
.+.. . +|++.+++|. . ..|+++|+++++++..+++++.+++..+
T Consensus 287 ~~~~~~~Giptv~ig~p~--r------y~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 287 AVHLTGTGVPTVVMGPAT--R------HGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred HHHHhCCCCCEEEechhh--h------cccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 7765 3 8888755542 2 3999999999999999999999998554
No 71
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.53 E-value=1.8e-12 Score=125.17 Aligned_cols=243 Identities=16% Similarity=0.117 Sum_probs=162.9
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC--CCCEEEEEEecccCCC-----CC-C---
Q 013571 59 RIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG--GEPWFGLRAEMDALPL-----QE-M--- 127 (440)
Q Consensus 59 ~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~--~~~~i~~~~H~D~vp~-----~~-~--- 127 (440)
+++++|.++|++|+.|.++++++.++|++++.+++.+.. .|+++.+++. .+|+|++.||+|+|+. .+ +
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~D~~-GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~ 80 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVETDGL-GGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFR 80 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEECCC-CCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEE
Confidence 468999999999999999999999999999999876544 5699988653 3589999999999963 11 1
Q ss_pred ----CCC-c---------c--c-c--------------------cC----------------------------------
Q 013571 128 ----VEW-E---------H--K-S--------------------KN---------------------------------- 136 (440)
Q Consensus 128 ----~~~-~---------~--~-~--------------------~~---------------------------------- 136 (440)
..| | . . . .+
T Consensus 81 ~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~ 160 (350)
T TIGR03107 81 VVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQ 160 (350)
T ss_pred EEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 011 1 0 0 0 00
Q ss_pred --------CCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEeccC
Q 013571 137 --------NGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHIS 205 (440)
Q Consensus 137 --------~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~~~ 205 (440)
++++.|+. ++.++++++.+++.+++. +++.+++++|+..||.| .|++..... + ++|.+++++..
T Consensus 161 ~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~--i-~pD~aI~vDv~ 235 (350)
T TIGR03107 161 TETILTANGKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK--F-NPDIFFAVDCS 235 (350)
T ss_pred CCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh--C-CCCEEEEEecC
Confidence 02344444 458999999999999865 47889999999999955 688866443 2 57888876621
Q ss_pred CCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCc
Q 013571 206 PVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQA 284 (440)
Q Consensus 206 ~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~ 284 (440)
+ ++ .|... + .+| ..
T Consensus 236 ~-------------------------------~~d~~~~~-~---------~~l---------------------g~--- 250 (350)
T TIGR03107 236 P-------------------------------AGDIYGDQ-G---------GKL---------------------GE--- 250 (350)
T ss_pred C-------------------------------cCCCCCCC-c---------ccc---------------------CC---
Confidence 1 11 11000 0 000 00
Q ss_pred ccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCC
Q 013571 285 GNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEP 364 (440)
Q Consensus 285 ~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 364 (440)
|.-+.+ ... ....+..+.+.+.+++++. +.+
T Consensus 251 ----------------------------------------Gp~i~~------~D~--~~i~~~~l~~~l~~~A~~~-~I~ 281 (350)
T TIGR03107 251 ----------------------------------------GTLLRF------FDP--GHIMLPRMKDFLLTTAEEA-GIK 281 (350)
T ss_pred ----------------------------------------CceEEE------ecC--CCCCCHHHHHHHHHHHHHc-CCC
Confidence 111100 000 1123555666666666665 664
Q ss_pred CcccCCCCcccccHH--HHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 365 NVHLTPVEMGAEDFS--FYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 365 ~~~~~~~~~g~tD~~--~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
.+. ....|+||++ ++... +|++..++|.. ..|++.|.++++++..+++++.+++.++
T Consensus 282 ~Q~--~~~~gGtDa~~~~~~~~Gvpt~~i~ip~R--------y~Hs~~e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 282 YQY--YVAKGGTDAGAAHLKNSGVPSTTIGVCAR--------YIHSHQTLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred cEE--ecCCCCchHHHHHHhCCCCcEEEEccCcc--------cccChhheeeHHHHHHHHHHHHHHHHhc
Confidence 332 3445789999 45444 89888666643 3999999999999999999999998775
No 72
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.52 E-value=2.8e-12 Score=122.33 Aligned_cols=143 Identities=21% Similarity=0.214 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCC-CEEEEEEecccCCC-----CCC-
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGE-PWFGLRAEMDALPL-----QEM- 127 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~-~~i~~~~H~D~vp~-----~~~- 127 (440)
+++.+++++|.++|++|+.|.++.+++++.|+.++.+++.+. ..|++++++|.++ |.+++.||||.|.. .+.
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~D~-lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEVDR-LGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEEcC-CCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 567889999999999999999999999999999999987654 4569999988444 56999999999853 111
Q ss_pred -------CCC-c--cc----------c----------------cC-----------------------------------
Q 013571 128 -------VEW-E--HK----------S----------------KN----------------------------------- 136 (440)
Q Consensus 128 -------~~~-~--~~----------~----------------~~----------------------------------- 136 (440)
..| | +. . .+
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 011 1 00 0 00
Q ss_pred ----------CCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEec
Q 013571 137 ----------NGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIH 203 (440)
Q Consensus 137 ----------~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~ 203 (440)
++++-++. ++.++++++++++.| + +.+++.+++|+|+..||.| +|++....+ + ++|.++.++
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~--i-~pd~aiavd 235 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR--I-KPDIAIAVD 235 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc--c-CCCEEEEEe
Confidence 02232333 468999999999999 4 5679999999999999955 677666432 2 578888766
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.46 E-value=1.3e-11 Score=118.90 Aligned_cols=137 Identities=17% Similarity=0.143 Sum_probs=101.6
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCC-----CC-C----
Q 013571 58 RRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPL-----QE-M---- 127 (440)
Q Consensus 58 ~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~-----~~-~---- 127 (440)
++++++|.++|++|+.|.++++++.++|+.++.+++.+.. .|+++.. +.++|+|+|.||+|.|+. .+ +
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~D~~-GNli~~~-g~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGL-GSFVARK-GNKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEECCC-CCEEEEe-CCCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 3568999999999999999999999999999999876544 4599986 433479999999999963 11 1
Q ss_pred ---CCCc----------c--c-c-c-------------------------------------------------------
Q 013571 128 ---VEWE----------H--K-S-K------------------------------------------------------- 135 (440)
Q Consensus 128 ---~~~~----------~--~-~-~------------------------------------------------------- 135 (440)
.+|. . . . .
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 1121 0 0 0 0
Q ss_pred ----CCCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEec
Q 013571 136 ----NNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIH 203 (440)
Q Consensus 136 ----~~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~ 203 (440)
.++++.|+. +..++++++.+++.+++ ++.+++++|+..||.| .|++..... + ++|.+++++
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~--i-~PDiaIavD 228 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH--I-KPDVVIVLD 228 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc--C-CCCEEEEEe
Confidence 003344444 35899999999999864 7789999999999954 688776543 2 578888876
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.36 E-value=2.3e-06 Score=89.18 Aligned_cols=134 Identities=17% Similarity=0.205 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHhC---CCCCcc-hHHHHHHHHHHHHhCCC-------ceeec-----------------CCCceEEEEEc
Q 013571 55 EWMRRIRRRIHEN---PELGFE-EYETSQLVRSELDSLGI-------EYTWP-----------------VAKTGIVASVG 106 (440)
Q Consensus 55 ~~~~~~~~~l~~~---ps~s~~-e~~~~~~l~~~l~~~G~-------~~~~~-----------------~~~~nv~~~~~ 106 (440)
++..+.+.++.++ |..|.+ |..+.+|+.+++.+..- +.+.+ ....|++.++.
T Consensus 57 ~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~ 136 (834)
T KOG2194|consen 57 ARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKIS 136 (834)
T ss_pred HHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecC
Confidence 5556666666665 444443 45778888877765521 11111 23567999986
Q ss_pred CC---CCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhH-HHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-
Q 013571 107 SG---GEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDV-HTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY- 181 (440)
Q Consensus 107 ~~---~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~-~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~- 181 (440)
++ ++-.+++++|+|+||.+ +|.||+| ++|.+|++++.+.+....++++|+|+|...||.+
T Consensus 137 ~k~~~~~~~lLlnaHfDSvpt~---------------~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L 201 (834)
T KOG2194|consen 137 PKNGNDKNALLLNAHFDSVPTG---------------PGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGL 201 (834)
T ss_pred CCCCCccceeeeeccccccCCC---------------CCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchh
Confidence 54 22489999999999964 4556665 7899999999999887778999999999999954
Q ss_pred cchHHHHHcCCCC-CCCEEEEec
Q 013571 182 GGAYYMIKEGAVD-KFQGMFGIH 203 (440)
Q Consensus 182 ~G~~~l~~~~~~~-~~d~~~~~~ 203 (440)
.|+..++.++.+. .+.+.+.++
T Consensus 202 ~gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 202 LGSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred hhcccceecChhhhhhheEEecc
Confidence 6887777765543 344444444
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.26 E-value=2.7e-06 Score=74.95 Aligned_cols=83 Identities=23% Similarity=0.365 Sum_probs=57.9
Q ss_pred EEEEEEecccCCCCCCCCCcccccCCCcccccchh-HHHHHHHHHHHHHHhcccCCCceEEEEEeccCC-cccchHHHHH
Q 013571 112 WFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHD-VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIK 189 (440)
Q Consensus 112 ~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k-~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE-~~~G~~~l~~ 189 (440)
.|++.||+|+++ +... +....|-.++ .|++++|++++.|++.+.+++++|.|+|..+|| +..|++++++
T Consensus 2 ~ivi~aH~Ds~~-~~~~--------~~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~ 72 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDAD--------GSWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVE 72 (179)
T ss_dssp EEEEEEE--BES-CCC---------TCSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHH
T ss_pred EEEEEeecCCCC-CcCC--------CcccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHH
Confidence 589999999998 2111 1122333355 589999999999999877889999999999999 4579999986
Q ss_pred cC--CCCCCCEEEEec
Q 013571 190 EG--AVDKFQGMFGIH 203 (440)
Q Consensus 190 ~~--~~~~~d~~~~~~ 203 (440)
.. ...++.+++.++
T Consensus 73 ~~~~~~~~~~~~inlD 88 (179)
T PF04389_consen 73 HDHEELDNIAAVINLD 88 (179)
T ss_dssp HHHCHHHHEEEEEEEC
T ss_pred hhhcccccceeEEecc
Confidence 31 122455666655
No 76
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=97.59 E-value=0.00031 Score=66.71 Aligned_cols=61 Identities=26% Similarity=0.253 Sum_probs=46.8
Q ss_pred Ccccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEec
Q 013571 138 GKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIH 203 (440)
Q Consensus 138 g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~ 203 (440)
+++.|+. +..++++++++++.+++.+ ++.+|+|+|++.||.| .|+.....+ + .+|.+++++
T Consensus 126 ~~i~gkalDdR~g~~~lle~l~~l~~~~--~~~~v~~v~tvqEEvG~rGA~~aa~~--i-~PD~ai~vD 189 (292)
T PF05343_consen 126 GRIVGKALDDRAGCAVLLELLRELKEKE--LDVDVYFVFTVQEEVGLRGAKTAAFR--I-KPDIAIAVD 189 (292)
T ss_dssp TEEEETTHHHHHHHHHHHHHHHHHTTSS---SSEEEEEEESSCTTTSHHHHHHHHH--H--CSEEEEEE
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHhhcC--CCceEEEEEEeeeeecCcceeecccc--c-CCCEEEEEe
Confidence 4466776 3479999999999999864 5699999999999954 688877654 2 578888766
No 77
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.55 E-value=0.0012 Score=60.20 Aligned_cols=124 Identities=17% Similarity=0.210 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHhCCC--CCcchHHHHHHHHHHHHhCCCceeec----------CCCceEEEEEcCCCCCEEEEEEecccC
Q 013571 55 EWMRRIRRRIHENPE--LGFEEYETSQLVRSELDSLGIEYTWP----------VAKTGIVASVGSGGEPWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps--~s~~e~~~~~~l~~~l~~~G~~~~~~----------~~~~nv~~~~~~~~~~~i~~~~H~D~v 122 (440)
.++.+.++-+ -+|. .|.+..++.+||.+.|+.+|+.++.+ ..-.|+++++.......+++.+|||+-
T Consensus 51 ~~~~~~L~p~-lv~Rvpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~r~lVlachydsk 129 (338)
T KOG3946|consen 51 NRLWENLLPI-LVPRVPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNASRYLVLACHYDSK 129 (338)
T ss_pred HHHHHhhhhh-hccccCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcchheeeecccccc
Confidence 4555554443 2332 24556889999999999999988762 124689999976654789999999996
Q ss_pred CCCCCCCCcccccCCCc-ccccchhHHHHHHHHHHHHHHhc----ccCCCceEEEEEeccCCcc---------cchHHHH
Q 013571 123 PLQEMVEWEHKSKNNGK-MHGCGHDVHTTILLGAARLLKHR----MDRLKGTVKLVFQPGEEGY---------GGAYYMI 188 (440)
Q Consensus 123 p~~~~~~~~~~~~~~g~-i~GrG~k~~~a~~l~a~~~l~~~----~~~~~~~v~~~~~~dEE~~---------~G~~~l~ 188 (440)
-... +. +-+-|....+|+++..+++|.+. ....+-.+.++|..+||.- -|++++.
T Consensus 130 ~~p~-----------~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA 198 (338)
T KOG3946|consen 130 IFPG-----------GMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLA 198 (338)
T ss_pred cCCC-----------cceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHH
Confidence 3211 32 22233446899999999888653 2235678999999999941 2888887
Q ss_pred Hc
Q 013571 189 KE 190 (440)
Q Consensus 189 ~~ 190 (440)
++
T Consensus 199 ~~ 200 (338)
T KOG3946|consen 199 AK 200 (338)
T ss_pred HH
Confidence 65
No 78
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=97.00 E-value=0.0075 Score=58.28 Aligned_cols=114 Identities=16% Similarity=0.172 Sum_probs=76.5
Q ss_pred HHHHHHHHhCCCceeec---------CCCceEEEEEc-C-------CCCCEEEEEEecccCCCCCCCCCcccccCCCccc
Q 013571 79 QLVRSELDSLGIEYTWP---------VAKTGIVASVG-S-------GGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMH 141 (440)
Q Consensus 79 ~~l~~~l~~~G~~~~~~---------~~~~nv~~~~~-~-------~~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~ 141 (440)
+.+.......|+..... .--.|+.|++. | ...|+|++.+||||..+.+ +.=-
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~lsv 233 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------GLSV 233 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCC-----------CCCC
Confidence 45555566667765431 22478999985 2 1249999999999997543 2222
Q ss_pred ccchh-HHHHHHHHHHHHHHhcc----cCCCceEEEEEeccCC-cccchHHHHHc---CCCCCCCEEEEec
Q 013571 142 GCGHD-VHTTILLGAARLLKHRM----DRLKGTVKLVFQPGEE-GYGGAYYMIKE---GAVDKFQGMFGIH 203 (440)
Q Consensus 142 GrG~k-~~~a~~l~a~~~l~~~~----~~~~~~v~~~~~~dEE-~~~G~~~l~~~---~~~~~~d~~~~~~ 203 (440)
|.+.+ +|+.++|+.++.+.+.- ...+.++.|+.+++-- .-.|++++++- .+.+.+|+++|++
T Consensus 234 gADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 234 GADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred CCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 33334 47889999999887642 2357799999987766 34688888762 1223689999877
No 79
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=96.78 E-value=0.0048 Score=62.41 Aligned_cols=49 Identities=33% Similarity=0.335 Sum_probs=41.2
Q ss_pred ccchh-HHHHHHHHHHHHHHhcccCCCceEEEEEeccCC-cccchHHHHHcCC
Q 013571 142 GCGHD-VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGA 192 (440)
Q Consensus 142 GrG~k-~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE-~~~G~~~l~~~~~ 192 (440)
|..|+ .|++++|++++.|++.. ++++|.|++...|| +..|+.+++.+..
T Consensus 225 GA~DNasGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 225 GADDNASGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred CcccccHHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 43455 58999999999999875 89999999999999 5579999988644
No 80
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=96.67 E-value=0.0052 Score=64.60 Aligned_cols=77 Identities=25% Similarity=0.296 Sum_probs=59.1
Q ss_pred CceEEEEEcCC--CCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHH---HhcccCCCceEEE
Q 013571 98 KTGIVASVGSG--GEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLL---KHRMDRLKGTVKL 172 (440)
Q Consensus 98 ~~nv~~~~~~~--~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l---~~~~~~~~~~v~~ 172 (440)
-.|++|.++|+ +..-|++.+|.|..-. |.+ +...|++.++..++.+ ++.|++|.|+|+|
T Consensus 338 i~NIig~I~Gs~epD~~ViigahrDSw~~-------------Ga~---dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F 401 (702)
T KOG2195|consen 338 IQNIIGKIEGSEEPDRYVIIGAHRDSWTF-------------GAI---DPNSGTALLLEIARALSKLKKRGWRPRRTILF 401 (702)
T ss_pred eeeEEEEEecCcCCCeEEEEecccccccc-------------CCc---CCCccHHHHHHHHHHHHHHHHcCCCccceEEE
Confidence 36899999885 4578999999998853 211 1245677676766654 5679999999999
Q ss_pred EEeccCC-cccchHHHHHc
Q 013571 173 VFQPGEE-GYGGAYYMIKE 190 (440)
Q Consensus 173 ~~~~dEE-~~~G~~~l~~~ 190 (440)
+...+|| +..|+..+++.
T Consensus 402 ~sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 402 ASWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred EEccchhccccccHHHHHH
Confidence 9999999 55799999874
No 81
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=94.76 E-value=0.2 Score=45.94 Aligned_cols=68 Identities=24% Similarity=0.210 Sum_probs=50.2
Q ss_pred CEEEEEEecccCCCCCCCCCcccccCCCcccccch-hHHHHHHHHHHHHHHhc---ccCCCceEEEEEeccCCcc-cchH
Q 013571 111 PWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGH-DVHTTILLGAARLLKHR---MDRLKGTVKLVFQPGEEGY-GGAY 185 (440)
Q Consensus 111 ~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~-k~~~a~~l~a~~~l~~~---~~~~~~~v~~~~~~dEE~~-~G~~ 185 (440)
|.|++.+.||+.-.-. +.-.|-+. -.|++++|+++++|.+. ...++++|.|+|..+|--+ .|++
T Consensus 1 ~iIlv~armDs~s~F~-----------~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~ 69 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------DLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSS 69 (234)
T ss_pred CEEEEEecccchhccc-----------CCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchH
Confidence 5789999999985321 33233332 26899999999999865 2347899999999999944 6988
Q ss_pred HHHH
Q 013571 186 YMIK 189 (440)
Q Consensus 186 ~l~~ 189 (440)
.++.
T Consensus 70 R~vy 73 (234)
T PF05450_consen 70 RFVY 73 (234)
T ss_pred HHHH
Confidence 8865
No 82
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=93.21 E-value=1.4 Score=44.75 Aligned_cols=121 Identities=14% Similarity=0.040 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec------CCCce-EEEEEcCCC-CCEEEEEEeccc----C
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP------VAKTG-IVASVGSGG-EPWFGLRAEMDA----L 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~------~~~~n-v~~~~~~~~-~~~i~~~~H~D~----v 122 (440)
.+-+.+.|+|++.|.---.....++++.+.+++.|+++++. ..+.| +++.=+|+. .|.++..-+.-. +
T Consensus 171 a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y~g~~~~i~ 250 (483)
T PRK00913 171 AEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGKKPIA 250 (483)
T ss_pred HHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEECCCCCeEE
Confidence 56677889999999877778899999999999999998761 22333 455445553 355555444311 1
Q ss_pred CCCCCCCCcccc----cC-CCcccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 123 PLQEMVEWEHKS----KN-NGKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 123 p~~~~~~~~~~~----~~-~g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
-+|. ...|++ .+ .+.|++ +.|.+|.|+.+++++++.+.+ ++-+|..+....|=
T Consensus 251 LVGK--GITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~lk--l~vnV~~v~~l~EN 309 (483)
T PRK00913 251 LVGK--GLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAELK--LPVNVVGVVAACEN 309 (483)
T ss_pred EEcC--ceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 1111 222331 11 112332 224589999999999999875 78899988887776
No 83
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=93.12 E-value=0.5 Score=44.92 Aligned_cols=117 Identities=15% Similarity=0.100 Sum_probs=69.2
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec------CCCceEEEEE-cCCCCCEEEEEEecccCCCCCCCC--
Q 013571 59 RIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP------VAKTGIVASV-GSGGEPWFGLRAEMDALPLQEMVE-- 129 (440)
Q Consensus 59 ~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~------~~~~nv~~~~-~~~~~~~i~~~~H~D~vp~~~~~~-- 129 (440)
.+.|+|.+.|.---.....++++++.+++.|++++.. ..+.|.+.-+ +|+..|+-++.-+|.--+ ....
T Consensus 2 n~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~--~~~~~~ 79 (311)
T PF00883_consen 2 NLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNG--GKSKKP 79 (311)
T ss_dssp HHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETST--STTSEE
T ss_pred hHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCC--CCCCcc
Confidence 5678999999888888999999999999999988751 1122222111 222222223322333222 0111
Q ss_pred -------Ccccc----cC-CCcccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 130 -------WEHKS----KN-NGKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 130 -------~~~~~----~~-~g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
..|++ .+ .+.|.+ +.|.+|.|+.+++++++.+.+ ++-+|..+....|=
T Consensus 80 i~LVGKGiTFDtGG~~lKp~~~M~~Mk~DM~GAAaV~ga~~aia~lk--~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 80 IALVGKGITFDTGGLSLKPSGGMEGMKYDMGGAAAVLGAMRAIAKLK--LPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEEEEEEEEE-TTSSSCSTTGGGGGGGGHHHHHHHHHHHHHHHCT---SSEEEEEEEEEEE
T ss_pred EEEEcceEEEecCCccCCCCcchhhcccCcchHHHHHHHHHHHHHcC--CCceEEEEEEcccc
Confidence 11221 11 233443 445689999999999999875 67888888877765
No 84
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=92.33 E-value=3 Score=42.43 Aligned_cols=123 Identities=13% Similarity=0.046 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec------CCCce-EEEEEcCCC-CCEEEEEEecccCCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP------VAKTG-IVASVGSGG-EPWFGLRAEMDALPLQE 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~------~~~~n-v~~~~~~~~-~~~i~~~~H~D~vp~~~ 126 (440)
.+-+.+.|+|++-|.---.....++++.+.+++.|+++++. ..+.+ +++.=+|+. .|.++..-+...-+...
T Consensus 154 a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~~~~ 233 (468)
T cd00433 154 AEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGASKK 233 (468)
T ss_pred HHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCCCCC
Confidence 56677889999999877788899999999999999998762 22333 444434553 36666554432211000
Q ss_pred -----CCCCcccc----cC-CCcccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 127 -----MVEWEHKS----KN-NGKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 127 -----~~~~~~~~----~~-~g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
+....|++ .+ ...|.+ ..|.+|.|+.+++++++.+.+ ++-+|..+...-|=
T Consensus 234 ~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~--~~vnV~~i~~~~EN 295 (468)
T cd00433 234 PIALVGKGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELK--LPVNVVGVLPLAEN 295 (468)
T ss_pred cEEEEcCceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 01112321 11 111222 223489999999999999875 78889888877776
No 85
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=92.16 E-value=2.8 Score=42.95 Aligned_cols=120 Identities=12% Similarity=-0.025 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCcee-ec------CCC-ceEEEEEcCCCCCEEEEEEecccCCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYT-WP------VAK-TGIVASVGSGGEPWFGLRAEMDALPLQE 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~-~~------~~~-~nv~~~~~~~~~~~i~~~~H~D~vp~~~ 126 (440)
.+.+.+.|+|++-|.--......++++.+.+.+.|++++ +. ..+ ..+++.=.|+..|+-++.-+|. |..+
T Consensus 212 a~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y~--g~~~ 289 (569)
T PTZ00412 212 GHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEYI--GNPR 289 (569)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEeC--CCCC
Confidence 455678899999998777778889999998888999886 41 223 3355554555434444444443 2111
Q ss_pred CCCCc---------ccc----cC-CCcccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 127 MVEWE---------HKS----KN-NGKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 127 ~~~~~---------~~~----~~-~g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
...| |++ .+ .+.|.. .+|.+|.|+.+++++++.+.+ ++.+|..+....|=
T Consensus 290 -~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~Lk--lpvnVv~iiplaEN 354 (569)
T PTZ00412 290 -SSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKLQ--LPVNVVAAVGLAEN 354 (569)
T ss_pred -CCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHcC--CCeEEEEEEEhhhc
Confidence 1223 221 01 111221 223489999999999998875 77889888877766
No 86
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=91.99 E-value=0.1 Score=49.67 Aligned_cols=70 Identities=21% Similarity=0.305 Sum_probs=54.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH---hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013571 344 VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIG 420 (440)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~ 420 (440)
..+..+.+.+.+++++. +.+.+.. ....++||++.+... +|++.+.+|.. ..|++.|.+++++++.+
T Consensus 220 i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~r--------y~Hs~~e~~~~~Di~~~ 289 (292)
T PF05343_consen 220 IPNPKLVDKLREIAEEN-GIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCR--------YMHSPVEVIDLDDIEAT 289 (292)
T ss_dssp ESHHHHHHHHHHHHHHT-T--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEB--------STTSTTEEEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEecccc--------cCCCcceEEEHHHHHHH
Confidence 34678999999999998 8865432 567789999998763 78888777754 39999999999999998
Q ss_pred HHH
Q 013571 421 AAL 423 (440)
Q Consensus 421 ~~~ 423 (440)
+++
T Consensus 290 ~~L 292 (292)
T PF05343_consen 290 IDL 292 (292)
T ss_dssp HHH
T ss_pred hhC
Confidence 764
No 87
>PRK05015 aminopeptidase B; Provisional
Probab=91.92 E-value=3.9 Score=40.56 Aligned_cols=120 Identities=18% Similarity=0.094 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC---CCceeec------CCC-ceEEEEEcCCCCCEEEEEEecccCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSL---GIEYTWP------VAK-TGIVASVGSGGEPWFGLRAEMDALPL 124 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~---G~~~~~~------~~~-~nv~~~~~~~~~~~i~~~~H~D~vp~ 124 (440)
-+...+.|+|++-|.---.....++...++++++ ++++++. ..+ ..+++.=+|+..|+.++.-+|. |.
T Consensus 100 ~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~lv~L~Y~--~~ 177 (424)
T PRK05015 100 LKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVLLALDYN--PT 177 (424)
T ss_pred HHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEEEEEEec--CC
Confidence 4567889999999987777788888888888876 5766541 223 3344444555444444443443 43
Q ss_pred CCCCCCcc--cccC-------CC-------cccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 125 QEMVEWEH--KSKN-------NG-------KMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 125 ~~~~~~~~--~~~~-------~g-------~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
++ .+.|. .-+- +| .|.+ ..|.+|.|+.++++.++.+.+ ++.+|..++...|=
T Consensus 178 g~-~~~~v~~aLVGKGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~~--l~~nV~~il~~aEN 246 (424)
T PRK05015 178 GD-PDAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITRG--LNKRVKLFLCCAEN 246 (424)
T ss_pred CC-CCCCeeEEEecCceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhcC--CCceEEEEEEeccc
Confidence 32 12232 1111 11 1211 113478899999998888775 77899998887776
No 88
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=91.27 E-value=2.4 Score=42.85 Aligned_cols=123 Identities=16% Similarity=0.100 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec------CCCceEEEEE-cCC-CCCEEEEEEecccCCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP------VAKTGIVASV-GSG-GEPWFGLRAEMDALPLQE 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~------~~~~nv~~~~-~~~-~~~~i~~~~H~D~vp~~~ 126 (440)
.+-..+.++|..-|.---.....++++.++|...|+.++.. .-.-|.+..+ +++ ..|.++...|.++=|...
T Consensus 189 ~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~~ 268 (513)
T KOG2597|consen 189 AAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGADK 268 (513)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCcc
Confidence 45556677777777655566888999999999999877651 2233444444 344 346777777766654322
Q ss_pred C-----CCCcccc-----cCCCcccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 127 M-----VEWEHKS-----KNNGKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 127 ~-----~~~~~~~-----~~~g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
. .+..|.+ ...+.|.+ |++.+|.|+.+++++++.+.+ |+-++.+++.--|-
T Consensus 269 ~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcEN 330 (513)
T KOG2597|consen 269 TILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCEN 330 (513)
T ss_pred eEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeecc
Confidence 1 1122321 11123333 556689999999999998876 55888888877776
No 89
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=86.42 E-value=1.3 Score=45.41 Aligned_cols=46 Identities=17% Similarity=0.283 Sum_probs=41.0
Q ss_pred CCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 013571 269 LEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQ 320 (440)
Q Consensus 269 ~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~ 320 (440)
....|+|++.+.++ |++|.+++++|++|+++.+++.+.++++++..
T Consensus 335 ~~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~ 380 (477)
T TIGR01893 335 LVESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAKLA 380 (477)
T ss_pred eEEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhhc
Confidence 45678999999965 78999999999999999999999999999864
No 90
>PRK02256 putative aminopeptidase 1; Provisional
Probab=85.88 E-value=0.79 Score=46.39 Aligned_cols=76 Identities=11% Similarity=0.000 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCC----CCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTP----VEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 419 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~ 419 (440)
.+..+...+.+++++. |.+.+.... ...|+||...+++. +|++-+++|.. ..|++.|-++.+++..
T Consensus 380 ~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l--------~MHS~rE~~~~~D~~~ 450 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALL--------SMHSPFEIASKADIYE 450 (462)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhhh--------ccccHHHHhhHHHHHH
Confidence 3777888888888887 775432111 23679997777644 88877555532 3899999999999999
Q ss_pred HHHHHHHHHH
Q 013571 420 GAALHAAVAI 429 (440)
Q Consensus 420 ~~~~~~~~~~ 429 (440)
+++++..++.
T Consensus 451 ~~~ll~~f~~ 460 (462)
T PRK02256 451 TYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 91
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=85.54 E-value=14 Score=37.61 Aligned_cols=117 Identities=16% Similarity=0.091 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCC-Cceeec-------CCCceEEEEEcCC-CCCEEEEEEecccCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLG-IEYTWP-------VAKTGIVASVGSG-GEPWFGLRAEMDALPLQ 125 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G-~~~~~~-------~~~~nv~~~~~~~-~~~~i~~~~H~D~vp~~ 125 (440)
-+.+.+.|+|++.|.---.....++. ++.|.+.+ +++++. .+-+.+++.=.|+ ..|+++. ++=-+.+
T Consensus 167 ~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prliv---l~y~g~~ 242 (485)
T COG0260 167 AEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIV---LEYNGKG 242 (485)
T ss_pred HHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEE---EEcCCCC
Confidence 45677899999999887777888888 88887776 777651 2233355554455 2366553 3323322
Q ss_pred CC--------CCCcccccCCCc-c-cc---cchh---HHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 126 EM--------VEWEHKSKNNGK-M-HG---CGHD---VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 126 ~~--------~~~~~~~~~~g~-i-~G---rG~k---~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
+. .+..|++ +|. | -+ .+|| +|.|+.++++.++.+.+ ++.+|..+...-|=
T Consensus 243 ~~~~~iaLVGKGitFDs--GGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l~--l~vnv~~vl~~~EN 308 (485)
T COG0260 243 KAKKPIALVGKGITFDS--GGISIKPAAGMDTMKYDMGGAAAVLGAMRALAELK--LPVNVVGVLPAVEN 308 (485)
T ss_pred CCCceEEEEcCceeecC--CCcccCCccchhhhhcccchHHHHHHHHHHHHHcC--CCceEEEEEeeecc
Confidence 10 1122321 111 0 01 1233 89999999999999875 77888888777666
No 92
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=81.36 E-value=2.6 Score=42.87 Aligned_cols=80 Identities=9% Similarity=-0.021 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccC--CCCcccccHHHHHHH---hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLT--PVEMGAEDFSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 419 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~g~tD~~~~~~~---~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~ 419 (440)
.+..+...+++++++. |.+.+... ...++++|.+.+... +|++-+++|. ...|++.|-++.+++..
T Consensus 373 td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~--------l~MHS~rE~~~~~D~~~ 443 (465)
T PTZ00371 373 TNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQ--------LAMHSIREMCGVVDIYY 443 (465)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhh--------cccccHHHHccHHHHHH
Confidence 4678888899998887 77533321 244568888877663 7877644443 23899999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 013571 420 GAALHAAVAISYLD 433 (440)
Q Consensus 420 ~~~~~~~~~~~~~~ 433 (440)
+++++..++..+..
T Consensus 444 ~~~l~~af~~~~~~ 457 (465)
T PTZ00371 444 LVKLIKAFFTNYSK 457 (465)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999876543
No 93
>PRK02813 putative aminopeptidase 2; Provisional
Probab=79.86 E-value=2.3 Score=42.80 Aligned_cols=76 Identities=11% Similarity=-0.060 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCC--CCcccccHHHHHHH---hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTP--VEMGAEDFSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 419 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~g~tD~~~~~~~---~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~ 419 (440)
.+......+++++++. |.+.+.... ..+++||.+.+... +|++-+++|.. ..|++.|-++.+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l--------~MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPML--------AMHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhc--------ccccHHHHccHHHHHH
Confidence 4677788888888887 775333211 23478888887662 78776444432 3899999999999999
Q ss_pred HHHHHHHHHH
Q 013571 420 GAALHAAVAI 429 (440)
Q Consensus 420 ~~~~~~~~~~ 429 (440)
+++++..++.
T Consensus 417 ~~~l~~~f~~ 426 (428)
T PRK02813 417 LIKALTAFFS 426 (428)
T ss_pred HHHHHHHHhc
Confidence 9999988753
No 94
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=72.33 E-value=14 Score=35.71 Aligned_cols=71 Identities=23% Similarity=0.194 Sum_probs=43.9
Q ss_pred ceEEEEEcCCCCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccC
Q 013571 99 TGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGE 178 (440)
Q Consensus 99 ~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dE 178 (440)
+|+|+.=+ +..+.+++.+|.|+=..|. +++-.|++..+.++..|...+. ...++..+.|
T Consensus 179 y~~Ia~~~-~en~vv~i~AH~DHW~~G~----------------tDN~lg~~~AV~~~~~lr~~~~----~~~lv~FtAE 237 (486)
T COG4882 179 YNVIAVDG-GENGVVLIGAHLDHWYTGF----------------TDNILGVAQAVETAGRLRGRGL----AAGLVVFTAE 237 (486)
T ss_pred EEEEEecC-CCCCceEEeechhhhhhcc----------------cchhhhHHHHHHHHHHHhhcCc----ceeEEEEecc
Confidence 34555433 2337899999999876432 1122567777888888876652 3445555667
Q ss_pred C-cc---------cchHHHHHc
Q 013571 179 E-GY---------GGAYYMIKE 190 (440)
Q Consensus 179 E-~~---------~G~~~l~~~ 190 (440)
| ++ .|++.+++.
T Consensus 238 E~g~p~~~sfyWa~GSr~~lk~ 259 (486)
T COG4882 238 EHGMPGMASFYWAAGSRGLLKE 259 (486)
T ss_pred ccCCCCCcceeecccchHHHhh
Confidence 7 43 288887764
No 95
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=56.79 E-value=45 Score=34.40 Aligned_cols=73 Identities=14% Similarity=0.157 Sum_probs=52.6
Q ss_pred CCceEEEEEcC---CCCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEE
Q 013571 97 AKTGIVASVGS---GGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLV 173 (440)
Q Consensus 97 ~~~nv~~~~~~---~~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~ 173 (440)
.+.|++|.+.. ++...+++..-++... +. -+.++++.+++.++++++..+ ..++|+|+
T Consensus 2 ~G~nvy~i~rapR~d~tEaivl~~~~~~~~--------------~~----~n~~~v~l~lal~~~~~~~~~-wsKDii~l 62 (504)
T PF04114_consen 2 SGTNVYGILRAPRGDGTEAIVLVVPWRDSD--------------GE----YNAGGVALALALARYFRRQSY-WSKDIIFL 62 (504)
T ss_pred CceEEEEEEecCCCCCceeEEEEEecCCCC--------------cc----cchhhHHHHHHHHHHhhhchh-hhccEEEE
Confidence 36789999843 2236888887765432 21 135788889999999998764 68999999
Q ss_pred EeccCCcccchHHHHHc
Q 013571 174 FQPGEEGYGGAYYMIKE 190 (440)
Q Consensus 174 ~~~dEE~~~G~~~l~~~ 190 (440)
++.+|. .|.+..+++
T Consensus 63 ~~~~~~--~g~~awl~~ 77 (504)
T PF04114_consen 63 FTDDEL--AGMQAWLEA 77 (504)
T ss_pred ecCCcc--hHHHHHHHH
Confidence 987665 577777764
No 96
>PRK06156 hypothetical protein; Provisional
Probab=45.71 E-value=1.6e+02 Score=30.59 Aligned_cols=25 Identities=16% Similarity=0.112 Sum_probs=21.5
Q ss_pred EEEEEEEecCCcccccccceEEEEE
Q 013571 273 VVTVGFIDAGQAGNIIPEIVRFGGT 297 (440)
Q Consensus 273 t~~~~~i~gG~~~n~iP~~a~~~~~ 297 (440)
+.++..++||...|+||+.|.+.+.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEEe
Confidence 5667888999999999999998843
No 97
>PRK02256 putative aminopeptidase 1; Provisional
Probab=44.42 E-value=38 Score=34.46 Aligned_cols=41 Identities=20% Similarity=0.076 Sum_probs=29.5
Q ss_pred CCcccccc-h-hHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc
Q 013571 137 NGKMHGCG-H-DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY 181 (440)
Q Consensus 137 ~g~i~GrG-~-k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~ 181 (440)
+.+|.|.+ | ..++.+++.++..+. .+...++++++..||.|
T Consensus 251 ~efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVG 293 (462)
T PRK02256 251 RSLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIG 293 (462)
T ss_pred cceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccC
Confidence 45677666 3 367777788776553 35678999999999954
No 98
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=41.05 E-value=61 Score=33.32 Aligned_cols=44 Identities=18% Similarity=0.278 Sum_probs=36.5
Q ss_pred CeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 013571 271 ARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQ 320 (440)
Q Consensus 271 ~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~ 320 (440)
.+++|++.++ .--+.|++.+++|++++.+.+++.+++++..+..
T Consensus 343 ~~S~Nlg~v~------~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~ 386 (485)
T PRK15026 343 ETSLNVGVVT------MTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLA 386 (485)
T ss_pred EeeeEEEEEE------EeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHc
Confidence 4677887766 3446799999999999999999999999887654
No 99
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=35.54 E-value=1.1e+02 Score=28.06 Aligned_cols=86 Identities=16% Similarity=0.203 Sum_probs=54.8
Q ss_pred CCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHH--HhcccCCCceEEEEEeccCC--c----
Q 013571 109 GEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLL--KHRMDRLKGTVKLVFQPGEE--G---- 180 (440)
Q Consensus 109 ~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l--~~~~~~~~~~v~~~~~~dEE--~---- 180 (440)
..|++.+.|-+--+.+.+. +-|.+ -+.||.++++..|++.+ ++.|..++++|++.---.-- .
T Consensus 30 ~aptlGIiGRLGgigARP~--------~iGlV--SDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~ 99 (276)
T PF06675_consen 30 SAPTLGIIGRLGGIGARPE--------RIGLV--SDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHD 99 (276)
T ss_pred CCCeeEEEeeccccccccc--------ceeee--ecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCC
Confidence 4589999988877754221 01221 12367788887777765 46788899999996543322 1
Q ss_pred ----c---cchHHHHHcCCCCCCCEEEEecc
Q 013571 181 ----Y---GGAYYMIKEGAVDKFQGMFGIHI 204 (440)
Q Consensus 181 ----~---~G~~~l~~~~~~~~~d~~~~~~~ 204 (440)
+ .+...+.+...-...|++++++.
T Consensus 100 PvpFM~sPv~~~~~n~~EV~p~mdAILSiDT 130 (276)
T PF06675_consen 100 PVPFMGSPVDMATMNRHEVDPEMDAILSIDT 130 (276)
T ss_pred CcccccCccCHHHHHHhhcCcccceEEEEec
Confidence 1 25666666655557899998773
No 100
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=34.52 E-value=1.5e+02 Score=30.35 Aligned_cols=62 Identities=15% Similarity=0.056 Sum_probs=39.1
Q ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHhCCCce-ee--------------cCCCceEEEEE-cCCC----CCEEEEEEecc
Q 013571 61 RRRIHENPELGFEEYETSQLVRSELDSLGIEY-TW--------------PVAKTGIVASV-GSGG----EPWFGLRAEMD 120 (440)
Q Consensus 61 ~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~-~~--------------~~~~~nv~~~~-~~~~----~~~i~~~~H~D 120 (440)
.++++.+-.-+.-+.++.+++.+.|++.||.- .+ ...+..++|.. ++.. ..--+..+|.|
T Consensus 9 ~~~~~~Fl~~s~t~~hav~~~~~~L~~~GF~~l~e~~~w~l~~g~kyyv~r~~ssl~Af~vg~~~~~~~~g~~ivgaHtD 88 (465)
T PTZ00371 9 AQEFLNFINKTGSPFHAVQELKERLKKSGFKQLNEGENWKLEKGGKYYLTRNNSTIVAFTVGKKFDAPNGGFKIVGAHTD 88 (465)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHCcCEEccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCCeEEEEEecc
Confidence 33444444445567899999999999999953 11 11233466654 4332 13568899999
Q ss_pred cC
Q 013571 121 AL 122 (440)
Q Consensus 121 ~v 122 (440)
.=
T Consensus 89 sP 90 (465)
T PTZ00371 89 SP 90 (465)
T ss_pred CC
Confidence 74
No 101
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=32.87 E-value=3.2e+02 Score=28.57 Aligned_cols=89 Identities=15% Similarity=0.229 Sum_probs=57.0
Q ss_pred HHHHHHHhCCCceeec---------CCCceEEEEEcC---CCCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhH
Q 013571 80 LVRSELDSLGIEYTWP---------VAKTGIVASVGS---GGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDV 147 (440)
Q Consensus 80 ~l~~~l~~~G~~~~~~---------~~~~nv~~~~~~---~~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~ 147 (440)
++...+++-|.++... ..+.|+++.+.+ ++...+++. ||-+..+ |. +.+
T Consensus 93 ~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl~-----vP~~~~~---------~~-----~~~ 153 (617)
T KOG3566|consen 93 WAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVLV-----VPYGRSS---------GS-----NSA 153 (617)
T ss_pred HHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEEE-----EecccCC---------Cc-----chh
Confidence 4566666668876542 236899999853 223677774 5532100 11 356
Q ss_pred HHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHc
Q 013571 148 HTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKE 190 (440)
Q Consensus 148 ~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~ 190 (440)
+++.+++.+++++... -..++|+++++-++- .|....+++
T Consensus 154 ~v~l~lsla~~f~r~~-yWsKDII~v~~d~~~--~g~~AwLea 193 (617)
T KOG3566|consen 154 SVALLLSLADYFSRWV-YWSKDIIFVFTDGPA--LGLDAWLEA 193 (617)
T ss_pred HHHHHHHHHHHhcCCe-eecccEEEEEeCCcc--ccHHHHHHH
Confidence 7777888888888764 378999999997754 456666554
No 102
>PRK02813 putative aminopeptidase 2; Provisional
Probab=29.25 E-value=1.8e+02 Score=29.30 Aligned_cols=55 Identities=15% Similarity=0.144 Sum_probs=36.2
Q ss_pred CCCcchHHHHHHHHHHHHhCCCce-ee--------------cCCCceEEEEE-cCCC---CCEEEEEEecccCC
Q 013571 69 ELGFEEYETSQLVRSELDSLGIEY-TW--------------PVAKTGIVASV-GSGG---EPWFGLRAEMDALP 123 (440)
Q Consensus 69 s~s~~e~~~~~~l~~~l~~~G~~~-~~--------------~~~~~nv~~~~-~~~~---~~~i~~~~H~D~vp 123 (440)
.-+.-+.++.+++++.|++.||.- .+ ...+.+++|.. +..+ ..--++.+|.|.-.
T Consensus 16 ~~s~t~~hav~~~~~~L~~~Gf~~l~e~~~w~l~~g~kyy~~r~~~sliAf~vg~~~~~~~g~~iv~aH~DsP~ 89 (428)
T PRK02813 16 DASPSPFHAVANVAQRLEAAGFTELDETDAWKLEPGGRYYVVRNGSSLIAFRVGEGAPAETGFRIVGAHTDSPG 89 (428)
T ss_pred HcCCCHHHHHHHHHHHHHHcCCeeccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCeEEEEEeccCCC
Confidence 344556899999999999999953 11 11234567665 3332 23568899999763
No 103
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=20.76 E-value=1.4e+02 Score=28.15 Aligned_cols=30 Identities=23% Similarity=0.103 Sum_probs=23.1
Q ss_pred EEEEEEEecCCcccccccceEEEEEEecCCh
Q 013571 273 VVTVGFIDAGQAGNIIPEIVRFGGTFRSLTT 303 (440)
Q Consensus 273 t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~ 303 (440)
.+.++.++=|-+.. +|..|.+.||+|+.|.
T Consensus 161 ~l~v~i~SFGfK~G-iP~dAD~VfDvRfLpN 190 (284)
T PF03668_consen 161 RLTVTIQSFGFKYG-IPPDADLVFDVRFLPN 190 (284)
T ss_pred ceEEEEEEeccccC-CCCCCCEEEEcCcCCC
Confidence 45556666677765 8999999999999874
No 104
>TIGR03406 FeS_long_SufT probable FeS assembly SUF system protein SufT. The function is unknown for this protein family, but members are found almost always in operons for the the SUF system of iron-sulfur cluster biosynthesis. The SUF system is present elsewhere on the chromosome for those few species where SUF genes are not adjacent. This family shares this property of association with the SUF system with a related family, TIGR02945. TIGR02945 consists largely of a DUF59 domain (see Pfam family pfam01883), while this protein is about double the length, with a unique N-terminal domain and DUF59 C-terminal domain. A location immediately downstream of the cysteine desulfurase gene sufS in many contexts suggests the gene symbol sufT. Note that some other homologs of this family and of TIGR02945, but no actual members of this family, are found in operons associated with phenylacetic acid (or other ring-hydroxylating) degradation pathways.
Probab=20.62 E-value=4.3e+02 Score=22.94 Aligned_cols=29 Identities=10% Similarity=-0.052 Sum_probs=16.4
Q ss_pred ceEEEEEEecCChhhHHHHHHHHHHHHHH
Q 013571 291 IVRFGGTFRSLTTEGLLYLEQRIKEVIEM 319 (440)
Q Consensus 291 ~a~~~~~~R~~~~~~~~~v~~~i~~~i~~ 319 (440)
.+.+.+.+-++-....+.+.+.+++.+..
T Consensus 114 ~V~I~mtLt~p~c~~~~~L~~dV~~aL~~ 142 (174)
T TIGR03406 114 RVDIEMTLTAPGCGMGPVLVEDVEDKVLA 142 (174)
T ss_pred EEEEEEEeCCCCCcHHHHHHHHHHHHHHh
Confidence 35555555444444555666777777654
No 105
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=20.50 E-value=4e+02 Score=26.33 Aligned_cols=92 Identities=13% Similarity=0.028 Sum_probs=47.4
Q ss_pred HHHHHHHHHhCCCceeec---CCCceEEEEE--cCCCCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhHHHHHH
Q 013571 78 SQLVRSELDSLGIEYTWP---VAKTGIVASV--GSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTIL 152 (440)
Q Consensus 78 ~~~l~~~l~~~G~~~~~~---~~~~nv~~~~--~~~~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~ 152 (440)
+.-..+.|++--++|.++ ..+.=-+|.+ +|...+.|+|.+|+.+=--. -+.=+|++.+
T Consensus 92 ~~~~~~~L~dg~Y~V~IdS~l~~G~L~ygE~~ipG~s~~EillsthiCHPsmA-----------------NdnLSG~~v~ 154 (386)
T PF09940_consen 92 SHNQLDALPDGEYEVVIDSTLEDGSLTYGEFVIPGESDEEILLSTHICHPSMA-----------------NDNLSGPAVL 154 (386)
T ss_dssp -HHHHHT--SSEEEEEEEEEEES-EEEEEEEEE--SSS-EEEEEEE----S-T-----------------TTTHHHHHHH
T ss_pred CHHHHhhCCCCceEEEEeeeecCCceeEEEEEecCCCCCeEEEEEeccCcccc-----------------cccccHHHHH
Confidence 333444455433555442 1232234443 66666899999998873211 0123788888
Q ss_pred HHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcC
Q 013571 153 LGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEG 191 (440)
Q Consensus 153 l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~ 191 (440)
+..++.|++.. ...+..|+|.++= -|+...+.+.
T Consensus 155 ~~La~~L~~~~--~rytYRflf~PeT---IGsI~yLskn 188 (386)
T PF09940_consen 155 TFLAKWLKQLP--NRYTYRFLFVPET---IGSITYLSKN 188 (386)
T ss_dssp HHHHHHHTTS----SSEEEEEEE-TT---HHHHHHHHH-
T ss_pred HHHHHHHhcCC--cCceEEEEEcccc---HHHHHHHHHC
Confidence 99999998774 4489999998742 4776666543
Done!