Query 013571
Match_columns 440
No_of_seqs 207 out of 1616
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 13:04:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013571.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013571hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xmb_A IAA-amino acid hydrolas 100.0 4.2E-60 1.4E-64 473.9 36.2 390 41-435 14-405 (418)
2 1ysj_A Protein YXEP; M20 famil 100.0 1.9E-59 6.4E-64 467.1 38.7 368 55-434 32-402 (404)
3 3io1_A Aminobenzoyl-glutamate 100.0 9.5E-59 3.3E-63 467.1 37.6 380 44-438 5-438 (445)
4 3pfo_A Putative acetylornithin 100.0 8E-53 2.7E-57 423.5 31.2 369 41-434 14-430 (433)
5 3ram_A HMRA protein; two-domai 100.0 2.5E-52 8.6E-57 413.9 32.9 359 41-435 4-376 (394)
6 1vgy_A Succinyl-diaminopimelat 100.0 1.3E-51 4.3E-56 409.5 32.5 362 55-437 6-383 (393)
7 1cg2_A Carboxypeptidase G2; me 100.0 2.8E-52 9.6E-57 414.2 27.6 365 41-433 7-391 (393)
8 3isz_A Succinyl-diaminopimelat 100.0 6E-51 2E-55 402.5 34.6 360 54-434 2-377 (377)
9 3rza_A Tripeptidase; phosphory 100.0 4.3E-50 1.5E-54 398.8 31.9 359 43-434 14-394 (396)
10 3dlj_A Beta-Ala-His dipeptidas 100.0 5.9E-49 2E-53 400.3 35.1 375 41-433 13-483 (485)
11 3tx8_A Succinyl-diaminopimelat 100.0 5.8E-50 2E-54 394.3 25.2 344 55-429 13-368 (369)
12 3gb0_A Peptidase T; NP_980509. 100.0 6.5E-49 2.2E-53 387.4 31.7 345 55-431 6-371 (373)
13 2f7v_A Aectylcitrulline deacet 100.0 3E-49 1E-53 389.0 26.9 337 55-430 9-367 (369)
14 2zog_A Cytosolic non-specific 100.0 2.2E-48 7.5E-53 396.1 32.9 373 42-434 9-477 (479)
15 2pok_A Peptidase, M20/M25/M40 100.0 6.9E-49 2.4E-53 399.7 27.5 374 41-431 31-480 (481)
16 3ct9_A Acetylornithine deacety 100.0 4.6E-49 1.6E-53 385.7 23.9 333 55-432 11-355 (356)
17 3pfe_A Succinyl-diaminopimelat 100.0 3.6E-48 1.2E-52 393.1 31.1 377 41-434 5-471 (472)
18 2rb7_A Peptidase, M20/M25/M40 100.0 4.5E-48 1.5E-52 379.8 24.3 335 55-434 6-361 (364)
19 3ife_A Peptidase T; metallopep 100.0 5.2E-47 1.8E-51 380.8 30.6 351 55-433 27-432 (434)
20 3khx_A Putative dipeptidase sa 100.0 3.3E-47 1.1E-51 387.4 27.2 364 42-434 23-491 (492)
21 1z2l_A Allantoate amidohydrola 100.0 3.8E-46 1.3E-50 373.7 30.8 344 55-435 9-413 (423)
22 3n5f_A L-carbamoylase, N-carba 100.0 2E-45 6.8E-50 366.6 34.2 341 55-433 5-407 (408)
23 1fno_A Peptidase T; metallo pe 100.0 6.9E-46 2.3E-50 371.1 29.4 350 55-436 2-409 (417)
24 2v8h_A Beta-alanine synthase; 100.0 9.6E-46 3.3E-50 375.3 27.9 346 55-434 32-448 (474)
25 2qyv_A XAA-His dipeptidase; YP 100.0 3.2E-44 1.1E-48 365.8 32.4 349 55-433 11-486 (487)
26 3mru_A Aminoacyl-histidine dip 100.0 7.4E-44 2.5E-48 362.3 29.0 344 55-432 14-487 (490)
27 1lfw_A PEPV; hydrolase, dipept 100.0 2.8E-43 9.5E-48 357.7 29.9 361 44-435 5-468 (470)
28 3t68_A Succinyl-diaminopimelat 100.0 1.6E-32 5.5E-37 257.6 19.3 249 55-433 6-268 (268)
29 4h2k_A Succinyl-diaminopimelat 100.0 2.4E-31 8.2E-36 249.6 22.1 250 54-433 5-268 (269)
30 1q7l_A Aminoacylase-1; catalys 99.9 8.5E-26 2.9E-30 201.9 12.8 172 55-228 10-197 (198)
31 2fvg_A Endoglucanase; TM1049, 99.9 1.5E-25 5.3E-30 217.3 13.6 248 60-433 3-335 (340)
32 1vhe_A Aminopeptidase/glucanas 99.9 1.7E-22 5.9E-27 198.2 20.8 256 55-434 7-355 (373)
33 2wyr_A Cobalt-activated peptid 99.9 1.1E-22 3.8E-27 196.6 18.0 243 57-431 4-332 (332)
34 2wzn_A TET3, 354AA long hypoth 99.9 2.6E-26 8.9E-31 221.9 -12.3 330 58-432 12-348 (354)
35 2gre_A Deblocking aminopeptida 99.9 1.1E-21 3.7E-26 190.8 17.1 243 55-430 6-344 (349)
36 1y0y_A FRV operon protein FRVX 99.9 6.4E-21 2.2E-25 185.7 20.8 250 57-433 8-350 (353)
37 1vho_A Endoglucanase; structur 99.9 9.6E-21 3.3E-25 184.1 18.2 250 55-437 5-340 (346)
38 3cpx_A Aminopeptidase, M42 fam 99.8 6.7E-21 2.3E-25 182.8 11.9 237 54-431 16-321 (321)
39 1ylo_A Hypothetical protein SF 99.8 2.7E-19 9.2E-24 174.0 22.1 250 59-433 7-338 (348)
40 1tkj_A Aminopeptidase, SGAP; d 99.8 2E-17 6.8E-22 155.9 21.1 135 55-203 7-160 (284)
41 1rtq_A Bacterial leucyl aminop 99.7 5E-16 1.7E-20 147.5 12.9 127 55-190 20-164 (299)
42 3kl9_A PEPA, glutamyl aminopep 99.7 5.5E-15 1.9E-19 142.7 20.1 247 56-432 4-345 (355)
43 3tc8_A Leucine aminopeptidase; 99.6 9.2E-15 3.2E-19 138.7 18.0 131 55-191 25-186 (309)
44 3gux_A Putative Zn-dependent e 99.6 2.2E-14 7.5E-19 136.2 16.3 131 55-191 27-189 (314)
45 2vpu_A TET3, 354AA long hypoth 99.6 3.6E-14 1.2E-18 136.8 16.1 66 57-124 11-77 (354)
46 2afw_A Glutaminyl-peptide cycl 99.5 4.4E-14 1.5E-18 135.7 12.1 126 55-190 31-190 (329)
47 3isx_A Endoglucanase; TM1050, 99.4 2.8E-12 9.7E-17 122.7 16.9 68 55-124 11-78 (343)
48 4fuu_A Leucine aminopeptidase; 99.3 3.2E-11 1.1E-15 114.7 18.4 133 55-191 25-187 (309)
49 4fai_A CG5976, isoform B; alph 99.3 1.4E-11 4.7E-16 118.2 15.1 138 55-203 38-204 (330)
50 3pb6_X Glutaminyl-peptide cycl 99.3 6.2E-12 2.1E-16 119.9 11.2 127 55-190 39-194 (330)
51 4f9u_A CG32412; alpha/beta hyd 99.3 1.8E-11 6.3E-16 116.7 13.6 126 55-190 11-163 (312)
52 1q7l_B Aminoacylase-1; catalys 99.1 7.3E-11 2.5E-15 90.2 5.1 80 347-434 1-81 (88)
53 3iib_A Peptidase M28; YP_92679 98.7 5.6E-08 1.9E-12 96.9 10.7 103 75-191 203-317 (444)
54 2ek8_A Aminopeptidase; metallo 98.7 8.4E-08 2.9E-12 95.1 10.9 100 75-190 171-285 (421)
55 3fed_A Glutamate carboxypeptid 98.2 1.9E-06 6.7E-11 89.8 8.6 77 98-190 312-394 (707)
56 3kas_A Transferrin receptor pr 98.1 4E-06 1.4E-10 86.5 8.5 78 98-191 266-350 (640)
57 3k9t_A Putative peptidase; str 93.9 0.31 1.1E-05 46.9 10.1 84 98-203 165-252 (435)
58 3vat_A Dnpep, aspartyl aminope 91.8 0.26 8.9E-06 48.8 6.6 80 345-433 404-488 (496)
59 2glf_A Probable M18-family ami 91.6 0.22 7.6E-06 48.9 5.9 78 345-431 368-450 (450)
60 2ijz_A Probable M18-family ami 89.9 0.15 5E-06 49.9 2.8 76 345-429 343-423 (428)
61 1y7e_A Probable M18-family ami 88.8 0.16 5.4E-06 50.2 2.1 76 344-428 376-456 (458)
62 4eme_A M18 aspartyl aminopepti 86.7 0.84 2.9E-05 45.8 5.9 81 345-433 472-562 (571)
63 2glf_A Probable M18-family ami 86.2 1.1 3.9E-05 43.8 6.5 68 56-123 15-97 (450)
64 2ijz_A Probable M18-family ami 85.8 0.2 6.7E-06 49.0 0.8 62 62-123 6-86 (428)
65 2hc9_A Leucine aminopeptidase 85.1 1.9 6.4E-05 42.4 7.3 120 55-179 167-307 (491)
66 1y7e_A Probable M18-family ami 84.6 0.54 1.8E-05 46.3 3.3 62 61-123 22-100 (458)
67 1lam_A Leucine aminopeptidase; 84.0 2.4 8.3E-05 41.7 7.6 120 55-179 161-305 (484)
68 3kzw_A Cytosol aminopeptidase; 84.0 1.9 6.5E-05 42.5 6.8 119 55-179 197-338 (515)
69 3ij3_A Cytosol aminopeptidase; 83.4 1.4 4.9E-05 43.0 5.6 120 55-179 167-305 (482)
70 2glj_A Probable M18-family ami 81.7 0.82 2.8E-05 45.1 3.3 75 345-428 380-459 (461)
71 1gyt_A Cytosol aminopeptidase; 81.6 2.6 9.1E-05 41.7 6.9 120 55-179 181-325 (503)
72 4efd_A Aminopeptidase; structu 81.3 2.4 8.2E-05 41.7 6.3 117 55-179 204-345 (522)
73 3jru_B Probable cytosol aminop 79.8 3.7 0.00013 40.4 7.1 120 55-179 176-317 (490)
74 3h8g_F Cytosol aminopeptidase; 79.7 3.7 0.00013 40.5 7.1 120 55-179 180-322 (497)
75 3pei_A Cytosol aminopeptidase; 77.9 3.8 0.00013 40.2 6.5 119 55-179 164-306 (486)
76 3kr4_A M17 leucyl aminopeptida 75.6 48 0.0016 32.7 13.5 120 55-179 205-349 (528)
77 2glj_A Probable M18-family ami 70.4 0.78 2.7E-05 45.2 -0.4 48 75-123 38-106 (461)
78 1rtq_A Bacterial leucyl aminop 69.9 14 0.00049 33.7 8.2 85 346-434 198-289 (299)
79 4f9u_A CG32412; alpha/beta hyd 63.9 7.2 0.00025 36.0 4.9 60 374-439 242-305 (312)
80 3mru_A Aminoacyl-histidine dip 62.2 13 0.00045 36.7 6.7 47 271-323 347-393 (490)
81 3iib_A Peptidase M28; YP_92679 52.5 8.5 0.00029 37.6 3.3 81 348-435 350-434 (444)
82 2ek8_A Aminopeptidase; metallo 48.2 35 0.0012 32.9 7.0 72 354-435 328-403 (421)
83 3fed_A Glutamate carboxypeptid 44.6 23 0.0008 36.7 5.3 50 41-94 15-67 (707)
84 2jvf_A De novo protein M7; tet 38.3 95 0.0032 21.3 7.1 63 290-365 15-80 (96)
85 3pb6_X Glutaminyl-peptide cycl 37.7 30 0.001 32.2 4.4 56 372-433 270-329 (330)
86 3tc8_A Leucine aminopeptidase; 34.9 87 0.003 28.6 7.1 81 348-430 221-308 (309)
87 4fai_A CG5976, isoform B; alph 32.7 39 0.0013 31.4 4.3 55 375-435 268-326 (330)
88 3vat_A Dnpep, aspartyl aminope 31.7 1E+02 0.0036 30.3 7.3 68 55-122 33-119 (496)
89 2afw_A Glutaminyl-peptide cycl 28.7 47 0.0016 30.7 4.2 53 375-433 272-328 (329)
90 3kas_A Transferrin receptor pr 27.8 28 0.00097 35.6 2.6 48 41-92 8-60 (640)
91 4eme_A M18 aspartyl aminopepti 24.3 1.3E+02 0.0043 30.2 6.4 60 63-122 12-91 (571)
No 1
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=4.2e-60 Score=473.87 Aligned_cols=390 Identities=50% Similarity=0.862 Sum_probs=316.2
Q ss_pred hHHHHHhcCCcchH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEe
Q 013571 41 TRELLDSAREPEFF--EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAE 118 (440)
Q Consensus 41 ~~~~~~~~~~~~~~--~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H 118 (440)
.+++.++++. .. +++++++++|+++||+|++|.++++||.++|+++|++++.+..++|+++++++++.|+|+|.||
T Consensus 14 ~~~i~~~~~~--~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH 91 (418)
T 1xmb_A 14 QTKLLEFAKS--PEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRAD 91 (418)
T ss_dssp --CHHHHHHS--HHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEE
T ss_pred HHHHHHHHHh--hhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEec
Confidence 3345555555 34 7899999999999999999999999999999999999887655789999997642289999999
Q ss_pred cccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCCCCE
Q 013571 119 MDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQG 198 (440)
Q Consensus 119 ~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~ 198 (440)
|||||.++|..|||...++|++||||+|++++++|+|+++|++.+.+++++|.|+|++|||++.|++.+++++.++++|+
T Consensus 92 ~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~ 171 (418)
T 1xmb_A 92 MDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEA 171 (418)
T ss_dssp CCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEE
T ss_pred ccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCE
Confidence 99999999999999988899999999999999999999999998878999999999999996679999999887767899
Q ss_pred EEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEE
Q 013571 199 MFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGF 278 (440)
Q Consensus 199 ~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~ 278 (440)
++++|.+++.+.|.+....+..++|..+++|+++|+++|+|+|+.|.|||..+++++.+|+++..+..++...++++++.
T Consensus 172 ~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~ 251 (418)
T 1xmb_A 172 IFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSK 251 (418)
T ss_dssp EEEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEE
T ss_pred EEEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEE
Confidence 99988766667776655666677899999999999999999999999999999999999988754444444567999999
Q ss_pred EecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHH
Q 013571 279 IDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGA 358 (440)
Q Consensus 279 i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (440)
|+||.+.|+||++|++++|+|+.| +.+++.++++++++..+..+++++++++......++|++..++++++.++++++
T Consensus 252 i~gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~~ 329 (418)
T 1xmb_A 252 VNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVR 329 (418)
T ss_dssp EC--------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHHH
T ss_pred EEecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEEccCCcccCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999999999 899999999999999888888888887621001126777789999999999999
Q ss_pred hhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhccc
Q 013571 359 SMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNL 435 (440)
Q Consensus 359 ~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~ 435 (440)
+++|.+++..+....|++|+++|.+.+|++++++|++... +....+|++||+++++++.+++++|+.++.+++.+.
T Consensus 330 ~~~g~~~~~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 405 (418)
T 1xmb_A 330 DLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEK 405 (418)
T ss_dssp HHHCGGGEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcceeccCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcC
Confidence 9778754322357889999999988899987778886532 224569999999999999999999999999998753
No 2
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.9e-59 Score=467.12 Aligned_cols=368 Identities=35% Similarity=0.605 Sum_probs=311.1
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec-CCCceEEEEEcCC-CCCEEEEEEecccCCCCCCCCCcc
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP-VAKTGIVASVGSG-GEPWFGLRAEMDALPLQEMVEWEH 132 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~~nv~~~~~~~-~~~~i~~~~H~D~vp~~~~~~~~~ 132 (440)
+++++++++|+++||+|++|.++++||.++|+++|++++.+ .+++|++++++++ ++|+|+|.|||||||+++|..+||
T Consensus 32 ~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~~Pf 111 (404)
T 1ysj_A 32 TRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLPF 111 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCCCTT
T ss_pred HHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCCCCCc
Confidence 88999999999999999999999999999999999998653 3467999999764 468999999999999998888899
Q ss_pred cccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEEEeccCCCCCCCc
Q 013571 133 KSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGT 212 (440)
Q Consensus 133 ~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~ 212 (440)
....+|++||||+|++++++|+++++|++.+..++++|.|+|++|||++.|++.+++++.++++|+++++|.+++.+.|.
T Consensus 112 ~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~~~g~ 191 (404)
T 1ysj_A 112 ASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGT 191 (404)
T ss_dssp CCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSCTTE
T ss_pred ccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCCCCce
Confidence 98789999999999999999999999999877899999999999999877999999988777789999987766666676
Q ss_pred ccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccce
Q 013571 213 VGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIV 292 (440)
Q Consensus 213 ~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a 292 (440)
+....|..++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..+..++...++++++.|+||.+.|+||++|
T Consensus 192 v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a 271 (404)
T 1ysj_A 192 IGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPDQA 271 (404)
T ss_dssp EEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSCCSEE
T ss_pred EEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCceecCce
Confidence 65555554678999999999999999999999999999999999998775444445556799999999999999999999
Q ss_pred EEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhh-cCCCCcccCCC
Q 013571 293 RFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASM-VGEPNVHLTPV 371 (440)
Q Consensus 293 ~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~ 371 (440)
++++|+|+.|.++.+++.++++++++..+..++++++++. ...+|+...++++++.++++++++ +|.++. . .
T Consensus 272 ~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~g~g~~~~--~-~ 344 (404)
T 1ysj_A 272 EMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKW----FPYLPSVQNDGTFLNAASEAAARLGYQTVHA--E-Q 344 (404)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE----EEEECCEEECGGGHHHHHHHHHHTTCEEEEC--C-C
T ss_pred EEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE----ecCCCCccCCHHHHHHHHHHHHHhcCCcccc--c-c
Confidence 9999999999999999999999999998888899888876 456667777888999999999998 776432 2 6
Q ss_pred CcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 372 EMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 372 ~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
..|++|+++|.+.+|++++++||++. ..+|++||+++++++.+++++|+.++.+++++
T Consensus 345 ~~g~tD~~~~~~~~p~~~~~~G~~~~-----~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 402 (404)
T 1ysj_A 345 SPGGEDFALYQEKIPGFFVWMGTNGT-----EEWHHPAFTLDEEALTVASQYFAELAVIVLET 402 (404)
T ss_dssp BSSCCTHHHHHTTSCEEEEEEECCCS-----SCTTCTTCCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHCCeEEEEEcCCCC-----CCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 78899999999889988778898642 35999999999999999999999999999864
No 3
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=9.5e-59 Score=467.15 Aligned_cols=380 Identities=30% Similarity=0.410 Sum_probs=304.1
Q ss_pred HHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecC---------------------------
Q 013571 44 LLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV--------------------------- 96 (440)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~--------------------------- 96 (440)
+.+++++++ +++++++++|+++|+++++|.++++||.++|+++||+++...
T Consensus 5 ~~~~~~~~~--~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (445)
T 3io1_A 5 LDEYLRQLA--PSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQ 82 (445)
T ss_dssp HHHHHHTTH--HHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccc
Confidence 455667766 999999999999999999999999999999999999987631
Q ss_pred ------------CCceEEEEEcCC-CCCEEEEEEecccCCCCCCCCCc-------ccccCCCcccccchhHHHHHHHHHH
Q 013571 97 ------------AKTGIVASVGSG-GEPWFGLRAEMDALPLQEMVEWE-------HKSKNNGKMHGCGHDVHTTILLGAA 156 (440)
Q Consensus 97 ------------~~~nv~~~~~~~-~~~~i~~~~H~D~vp~~~~~~~~-------~~~~~~g~i~GrG~k~~~a~~l~a~ 156 (440)
+++|++|+++++ ++|+|+|.|||||||+++...|+ |....+|++||||+|++++++|+++
T Consensus 83 g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa 162 (445)
T 3io1_A 83 GAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLA 162 (445)
T ss_dssp TCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHHH
T ss_pred cccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHH
Confidence 578999999765 57999999999999998777774 3345689999999999999999999
Q ss_pred HHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCC
Q 013571 157 RLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGG 236 (440)
Q Consensus 157 ~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~ 236 (440)
++|++.+.+++++|.|+|++|||++.|++.|+++|.++++|+++++|+.++.+.|.+....+.. .+..+++|+++|+++
T Consensus 163 ~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~-~a~~~~~i~v~Gk~~ 241 (445)
T 3io1_A 163 HVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNF-MATTKFDVQFSGVAA 241 (445)
T ss_dssp HHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCB-CEEEEEEEEEECCCS
T ss_pred HHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCe-eEEEEEEEEEEeecC
Confidence 9999888789999999999999988899999999988889999999987666677665443221 235799999999999
Q ss_pred CC-CCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHH
Q 013571 237 HA-AMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKE 315 (440)
Q Consensus 237 Hs-s~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~ 315 (440)
|+ ++|+.|+|||..+++++.+|+.+. +..+ +..+++++.|+||.+.|+||++|++++++|..+.++.+++.++|++
T Consensus 242 HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~ 318 (445)
T 3io1_A 242 HAGGKPEDGRNALLAAAQAALGLHAIP-PHSA--GASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQH 318 (445)
T ss_dssp STTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT--BCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC--CCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHHHH
Confidence 98 699999999999999999999873 2222 3578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccC-CCCcccccHHHHHHHhc-----cce
Q 013571 316 VIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLT-PVEMGAEDFSFYTQRMP-----AAH 389 (440)
Q Consensus 316 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~g~tD~~~~~~~~p-----~v~ 389 (440)
+++..+..+++++++++ ...+|++.+++++++.+++++++++|.+++... ....|++|+++|.+.+| .++
T Consensus 319 ~~~~~a~~~g~~~~i~~----~~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~~D~~~~~~~~P~~gg~~~~ 394 (445)
T 3io1_A 319 VVAGAAAMYEARYELRM----MGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLMMARVQARGGLASY 394 (445)
T ss_dssp HHHHHHHHTTCEEEEEE----EEEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBCCTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhCCeEEEEE----ecCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccHHHHHHHHHHhcccCCceEE
Confidence 99999989999999988 556778888999999999999998776543222 23589999999998887 566
Q ss_pred EEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcccccc
Q 013571 390 FYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLEVE 438 (440)
Q Consensus 390 ~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 438 (440)
+++|++.. ...|++||+++++++..++++|+.++.+++.+++.|
T Consensus 395 ~~~G~~~~-----~~~H~~~E~i~~~~l~~g~~~~~~~~~~~~~~~~~~ 438 (445)
T 3io1_A 395 MIFGTELS-----AGHHNEKFDFDESVMAVAVETLARVALNFPWQRGVE 438 (445)
T ss_dssp EEEEEEC----------------CCCHHHHHHHHHHHHHHTCCSCC---
T ss_pred EEEeCCCC-----CCCCCCCCcCCHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 77887532 348999999999999999999999999999887654
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=8e-53 Score=423.54 Aligned_cols=369 Identities=14% Similarity=0.107 Sum_probs=305.9
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec---------------------CCCc
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP---------------------VAKT 99 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~---------------------~~~~ 99 (440)
.+++.++++.+. +++++++++|+++||+|++|.++++||.++|+++|++++.. ++++
T Consensus 14 ~~~i~~~i~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (433)
T 3pfo_A 14 TQSLRAAVDRNF--NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSM 91 (433)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCE
T ss_pred HHHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCc
Confidence 666788888877 99999999999999999999999999999999999988641 4578
Q ss_pred eEEEEEcCC-CCCEEEEEEecccCCCCCCC---CCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEE
Q 013571 100 GIVASVGSG-GEPWFGLRAEMDALPLQEMV---EWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVK 171 (440)
Q Consensus 100 nv~~~~~~~-~~~~i~~~~H~D~vp~~~~~---~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~ 171 (440)
|++++++++ ++|+|+|+|||||||.++.. ..||.. .++|++|||| ||++++++|+++++|++.+.+++++|.
T Consensus 92 ~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~ 171 (433)
T 3pfo_A 92 QVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARVH 171 (433)
T ss_dssp EEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCEE
T ss_pred EEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccEE
Confidence 999999754 56899999999999987644 446764 5789999999 489999999999999998877899999
Q ss_pred EEEeccCCc-ccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHH
Q 013571 172 LVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLA 250 (440)
Q Consensus 172 ~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~ 250 (440)
|+|++|||. +.|++.+++++. ++|++++.++.. +.+ ...++|..+++|+++|+++|+|+|+.|.||+..
T Consensus 172 ~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~ep~~----~~i----~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~ 241 (433)
T 3pfo_A 172 VQTVTEEESTGNGALSTLMRGY--RADACLIPEPTG----HTL----TRAQVGAVWFRLRVRGTPVHVAYSETGTSAILS 241 (433)
T ss_dssp EEEESCTTTTCHHHHHHHHTTC--CCSEEEECCCCS----SCE----EEEECEEEEEEEEEECCCCBGGGGGGSCCHHHH
T ss_pred EEEEecCccCChhHHHHHhcCC--CCCEEEEeCCCC----Cce----EEecceEEEEEEEEEcCCCccCCCCcCcCHHHH
Confidence 999999995 569999998765 689998876422 122 224579999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccc-----CCC-----CCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHH
Q 013571 251 ASFAILTLQHIVSRE-----TDP-----LEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQ 320 (440)
Q Consensus 251 ~~~~i~~l~~~~~~~-----~~~-----~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~ 320 (440)
+++++.+|+++..+. .++ ....+++++.|+||.+.|+||++|++.+++|+.|+++.+++.++|++++++.
T Consensus 242 ~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~~ 321 (433)
T 3pfo_A 242 AMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADA 321 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 999999998775321 122 2346899999999999999999999999999999999999999999999987
Q ss_pred HHHcC----CeEEEEEeccccCCCCC--cCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH--hccceEEE
Q 013571 321 AAVHQ----CSATIDFLEEKMRHYPA--TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR--MPAAHFYV 392 (440)
Q Consensus 321 ~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~v~~~~ 392 (440)
++.++ +++++++.+ ..+|+ .+.++++++.+.+++++.+|.++. .....|++|+++|.+. +|++. +
T Consensus 322 ~~~~~~~~~~~~~v~~~~---~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~~--~~~~~g~~D~~~~~~~~giP~v~--~ 394 (433)
T 3pfo_A 322 QATDSFLSENPAELVWSG---FQADPAVCEPGGVAEDVLTAAHKAAFNAPLD--ARLSTAVNDTRYYSVDYGIPALC--Y 394 (433)
T ss_dssp HTTCHHHHHSCCEEEEEE---EEECCEECCTTCHHHHHHHHHHHHHHSSCCC--EEEESSCCTHHHHHHTTCCCEEE--C
T ss_pred hhhCcccccCCeEEEEec---ccCCcccCCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeeccHHHHHhhCCCCEEE--E
Confidence 75542 345555421 23333 345789999999999997798653 2467889999999984 89764 6
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 393 GTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 393 G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
||+.. .+|++||+++++++..++++|+.++.++++.
T Consensus 395 Gp~~~------~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~~ 430 (433)
T 3pfo_A 395 GPYGQ------GPHAFDERIDLESLRKTTLSIALFVAEWCGL 430 (433)
T ss_dssp CCCEE------CTTSTTCEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred CCCCc------cCCCCCceEEHHHHHHHHHHHHHHHHHHhcc
Confidence 76633 4999999999999999999999999999874
No 5
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=2.5e-52 Score=413.89 Aligned_cols=359 Identities=24% Similarity=0.294 Sum_probs=310.0
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCC--CceEEEEEcCC-CCCEEEEEE
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVA--KTGIVASVGSG-GEPWFGLRA 117 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~nv~~~~~~~-~~~~i~~~~ 117 (440)
.+++.++++.++ +++++++++|+++|++|++|.++++||.++|+++|++++.+.. ++|++++++++ ++|+|+|.|
T Consensus 4 ~~~i~~~~~~~~--~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~a 81 (394)
T 3ram_A 4 KQQILDYIETNK--YSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLA 81 (394)
T ss_dssp HHHHHHHHHHTH--HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEE
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEE
Confidence 456677777766 9999999999999999999999999999999999999877543 57999999765 569999999
Q ss_pred ecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchH-HHHHcCCCC
Q 013571 118 EMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAY-YMIKEGAVD 194 (440)
Q Consensus 118 H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~-~l~~~~~~~ 194 (440)
|||||| |++||||+|...+++|+++++|++.+..++++|.|+|++|||++ .|++ .|++.|.++
T Consensus 82 h~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~ 147 (394)
T 3ram_A 82 EYDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVID 147 (394)
T ss_dssp CCCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGG
T ss_pred ecccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCcc
Confidence 999999 77899999999999999999999876678999999999999964 6999 999999888
Q ss_pred CCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeE
Q 013571 195 KFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARV 273 (440)
Q Consensus 195 ~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t 273 (440)
++|+++++|+.++. ..+..++|..+++|+++|+++|+| +|+.|+|||..+++++..|+.+.... + ..++
T Consensus 148 ~~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~--~-~~~~ 217 (394)
T 3ram_A 148 QIDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI--K-KDQR 217 (394)
T ss_dssp GCSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS--C-TTCE
T ss_pred cCCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC--C-CCCe
Confidence 89999999976532 223456899999999999999999 99999999999999999999875322 1 2356
Q ss_pred EEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHH
Q 013571 274 VTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHG 353 (440)
Q Consensus 274 ~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (440)
++++.++||.+.|+||++|++++++|..+.++.+++.++|+++++..+..+|+++++++. ...+|++.+|+++++.+
T Consensus 218 ~~~~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~---~~~~~~~~~d~~l~~~~ 294 (394)
T 3ram_A 218 VHGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPI---QNGVNEFIKTPKLDDLF 294 (394)
T ss_dssp EEEEEEEBCSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEES---SCCBCCCCCCHHHHHHH
T ss_pred eEEEEEECCCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe---cCCCCCccCCHHHHHHH
Confidence 778889999999999999999999999999999999999999999999889999998862 35677888899999999
Q ss_pred HHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCC-------CCCCchHHHHHHHHH
Q 013571 354 KRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLV-------VDEDALPIGAALHAA 426 (440)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~-------i~~~~l~~~~~~~~~ 426 (440)
+++++++ | .++.....++|++|+++|.+.+|++++++|.++.. ...|++ |+ ++.+.+..++++++.
T Consensus 295 ~~a~~~~-G-~~~~~~~~~~g~~D~~~~~~~~P~~~~~~g~~~~~----~~~H~~-ef~~~~~~~~~~~~l~~g~~~la~ 367 (394)
T 3ram_A 295 AKYAEEV-G-EAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGSRN----LVGHTH-RFREAAASVHGDEALIKGAKIMAL 367 (394)
T ss_dssp HHHHHHT-T-CCBCCSCCCCBCCTHHHHTTTSCBCCCEEECSCTT----CCTTSH-HHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-C-cccccCCCCcccccHHHHHHHhchheEEeeecCCC----CCCCCH-HHHhccCCCccHHHHHHHHHHHHH
Confidence 9999985 8 44422357889999999998899998888865431 348999 66 489999999999999
Q ss_pred HHHHHhccc
Q 013571 427 VAISYLDNL 435 (440)
Q Consensus 427 ~~~~~~~~~ 435 (440)
++.+++.++
T Consensus 368 ~~~~~l~~~ 376 (394)
T 3ram_A 368 MGLELITNQ 376 (394)
T ss_dssp HHHHHHHCH
T ss_pred HHHHHhcCH
Confidence 999998864
No 6
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.3e-51 Score=409.53 Aligned_cols=362 Identities=18% Similarity=0.227 Sum_probs=291.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec--CCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCC--
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP--VAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW-- 130 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~-- 130 (440)
+++++++++|+++||+|++|.++++||.++|+++|++++.. +...|+++++ +.++|+|+|.|||||||.++...|
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRR-GTKAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CSSSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEE-CCCCCEEEEEcccCCcCCCCcccCCC
Confidence 67899999999999999999999999999999999998763 3568999999 444589999999999998764455
Q ss_pred -cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcCCC--CCCCEEEE
Q 013571 131 -EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAV--DKFQGMFG 201 (440)
Q Consensus 131 -~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~~~--~~~d~~~~ 201 (440)
||.. .++|++|||| +|++++++|++++.|++.+.+++++|.|+|++|||++ .|++.+++.+.. ..+|++++
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 6775 5689999999 3789999999999999877778999999999999964 689888764322 24688887
Q ss_pred eccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCeEEEEEEEe
Q 013571 202 IHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-TDPLEARVVTVGFID 280 (440)
Q Consensus 202 ~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~~~~i~ 280 (440)
.++.+..+.|.. +. ..++|..+++|+++|+++|++.|+.|.||+..+++++.+|+....+. .+....++++++.|+
T Consensus 165 ~e~~~~~~~g~~-i~--~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 241 (393)
T 1vgy_A 165 GEPTAVDKLGDM-IK--NGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNIN 241 (393)
T ss_dssp CCCCBSSSTTSE-EE--CEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEE
T ss_pred eCCCCcccCCce-eE--EeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEc
Confidence 775433333322 11 23579999999999999999999999999999999999998764222 123445799999999
Q ss_pred cCC-cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHh
Q 013571 281 AGQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGAS 359 (440)
Q Consensus 281 gG~-~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (440)
||. +.|+||++|++++|+|+.|.++.+++.++++++++. .+.++++++. ...+|...+++++++.+.+++++
T Consensus 242 gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~----~~~~~~~~~~---~~~~p~~~~~~~l~~~~~~~~~~ 314 (393)
T 1vgy_A 242 GGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK----HGVQYDLQWS---CSGQPFLTQAGKLTDVARAAIAE 314 (393)
T ss_dssp ECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEE---EEECCEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHH----hCCCeEEEEe---cCCCcccCCCcHHHHHHHHHHHH
Confidence 997 899999999999999999999999999999998864 4667777652 11233344578999999999999
Q ss_pred hcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhccccc
Q 013571 360 MVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLEV 437 (440)
Q Consensus 360 ~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~~~ 437 (440)
.+|.++. .....|++|++++... +|++ .+||... .+|++||+++++++.+++++|+.++.+++.....
T Consensus 315 ~~g~~~~--~~~~~g~~D~~~~~~~~~P~v--~~Gp~~~------~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~~~~ 383 (393)
T 1vgy_A 315 TCGIEAE--LSTTGGTSDGRFIKAMAQELI--ELGPSNA------TIHQINENVRLNDIPKLSAVYEGILVRLLAGNAV 383 (393)
T ss_dssp HHSSCCE--EECCSCCCTHHHHGGGEEEEE--ECCSBCT------TTTSTTCEEETTHHHHHHHHHHHHHHHHC-----
T ss_pred HcCCCce--EecCCccchHHHHHhCCCCEE--EECCCCC------CCCCCCCceeHHHHHHHHHHHHHHHHHHhccCcc
Confidence 8898653 2467789999999985 8854 3787643 3899999999999999999999999999876544
No 7
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.8e-52 Score=414.20 Aligned_cols=365 Identities=18% Similarity=0.186 Sum_probs=302.4
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhCCCceeecC-----CCceEEEEEcCCCCCE
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEE---YETSQLVRSELDSLGIEYTWPV-----AKTGIVASVGSGGEPW 112 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----~~~nv~~~~~~~~~~~ 112 (440)
..++.++++.+. +++++++++|++|||+|+++ .++++||.++|+++|++++... .++|++++++++.+|+
T Consensus 7 ~~~~~~~~~~~~--~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~~~~ 84 (393)
T 1cg2_A 7 DNVLFQAATDEQ--PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKN 84 (393)
T ss_dssp CHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSSCCC
T ss_pred hhHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCCCce
Confidence 566777777766 89999999999999999875 6889999999999999987643 3579999997654589
Q ss_pred EEEEEecccCCC-CCCCCCcccccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHH
Q 013571 113 FGLRAEMDALPL-QEMVEWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYM 187 (440)
Q Consensus 113 i~~~~H~D~vp~-~~~~~~~~~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l 187 (440)
|+|.|||||||. +++..|||. .++|++|||| +|++++++|++++.|++.+.+++++|.|+|+++||.+ .|++.+
T Consensus 85 i~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~ 163 (393)
T 1cg2_A 85 LLLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDL 163 (393)
T ss_dssp EEEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHHH
T ss_pred EEEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHHH
Confidence 999999999986 445678998 5689999999 4799999999999999988778889999999999954 699999
Q ss_pred HHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccC
Q 013571 188 IKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRET 266 (440)
Q Consensus 188 ~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~i~~l~~~~~~~~ 266 (440)
++++. .++|++++++++.. +.+.+. ..++|..+++|+++|+++|++ .|+.|.||+..+++++.+|+.+..
T Consensus 164 ~~~~~-~~~d~~i~~e~~~~-~~~~i~----~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~--- 234 (393)
T 1cg2_A 164 IQEEA-KLADYVLSFEPTSA-GDEKLS----LGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDD--- 234 (393)
T ss_dssp HHHHH-HHCSEEEECCCEET-TSCEEE----SEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCB---
T ss_pred HHHHh-hcCCEEEEeCCCCC-CCCcEE----EeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhC---
Confidence 87643 35799998875320 233322 234799999999999999996 799999999999999999987743
Q ss_pred CCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCC-
Q 013571 267 DPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVN- 345 (440)
Q Consensus 267 ~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 345 (440)
+...++++++.|+||.+.|+||++|++++++|+.|.++.+++.++++++++. +...++++++++ ...+|+...
T Consensus 235 -~~~~~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~ 308 (393)
T 1cg2_A 235 -KAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ-KKLPEADVKVIV----TRGRPAFNAG 308 (393)
T ss_dssp -TTTTEEEEEEEEEECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS-CSSTTCEEEEEE----EECSCCEECH
T ss_pred -cccCceEEEEEEeCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc-ccCCCcEEEEEe----ccccCCccCC
Confidence 2346799999999999999999999999999999999999999999999875 234577888776 445666644
Q ss_pred --CHHHHHHHHHHHHhhcCCCCcccCCC-CcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCC-CCCCCCCCchHHH
Q 013571 346 --DEKMYEHGKRVGASMVGEPNVHLTPV-EMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHS-PYLVVDEDALPIG 420 (440)
Q Consensus 346 --~~~~~~~~~~~~~~~~g~~~~~~~~~-~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~-~dE~i~~~~l~~~ 420 (440)
++++++.+++++++. |.++. +.. ..|+||+++|... +|+++ ++||... .+|+ +||+++++++.++
T Consensus 309 ~~~~~l~~~~~~~~~~~-g~~~~--~~~~~~g~tD~~~~~~~giP~~~-~~G~~~~------~~H~~~~E~i~~~~l~~~ 378 (393)
T 1cg2_A 309 EGGKKLVDKAVAYYKEA-GGTLG--VEERTGGGTDAAYAALSGKPVIE-SLGLPGF------GYHSDKAEYVDISAIPRR 378 (393)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCCE--EESCBSCCCTHHHHGGGSCCEEC-CCSCEEE------CTTSSSCCEEEGGGHHHH
T ss_pred cchHHHHHHHHHHHHHh-CCCCc--cccCCCcccHHHHHHhCCCCEEE-eCCCCCC------CccCCCcceEEehhHHHH
Confidence 478999999999865 87542 235 7799999999988 89863 5676532 3899 9999999999999
Q ss_pred HHHHHHHHHHHhc
Q 013571 421 AALHAAVAISYLD 433 (440)
Q Consensus 421 ~~~~~~~~~~~~~ 433 (440)
+++|+.++.+++.
T Consensus 379 ~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 379 LYMAARLIMDLGA 391 (393)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999976
No 8
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=6e-51 Score=402.54 Aligned_cols=360 Identities=18% Similarity=0.227 Sum_probs=286.3
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceee--cCCCceEEEEEcCCCCCEEEEEEecccCCCCCC---C
Q 013571 54 FEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTW--PVAKTGIVASVGSGGEPWFGLRAEMDALPLQEM---V 128 (440)
Q Consensus 54 ~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~--~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~---~ 128 (440)
.+++++++++|+++||+|++|.++++||.++|+++|++++. .+...|++++++ .++|+|+|.|||||||.++. .
T Consensus 2 ~~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g-~~~~~i~l~aH~D~vp~~~~~~w~ 80 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWS 80 (377)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEE-SSSCEEEEEEECCBCCCCCGGGCS
T ss_pred chHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeC-CCCCEEEEeccccccCCCCcccCC
Confidence 47899999999999999999999999999999999999875 235678999984 45699999999999998764 4
Q ss_pred CCccccc-CCCcccccch---hHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcCCC--CCCCEEE
Q 013571 129 EWEHKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAV--DKFQGMF 200 (440)
Q Consensus 129 ~~~~~~~-~~g~i~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~~~--~~~d~~~ 200 (440)
..||... ++|++||||+ |++++++|.+++.|++.+.+++++|.|+|++|||.+ .|++.+++.... ..+|+++
T Consensus 81 ~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~ 160 (377)
T 3isz_A 81 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 160 (377)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEE
Confidence 4467754 6899999993 789999999999998877778999999999999965 599888764221 2578888
Q ss_pred EeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CCCCCCeEEEEEEE
Q 013571 201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-TDPLEARVVTVGFI 279 (440)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~~~~i 279 (440)
+.++.+..+.|.. +. ..++|..+++++++|+++|+|.|+.|.||+..+++++.+|++...+. ......++++++.|
T Consensus 161 ~~e~~~~~~~g~~-i~--~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i 237 (377)
T 3isz_A 161 VGEPSSAKNLGDV-VK--NGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANI 237 (377)
T ss_dssp ECCCCBSSSTTSE-EE--EEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEE
T ss_pred EcCCCCcccCCce-EE--EEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEE
Confidence 8775443333321 11 23478999999999999999999999999999999999998764222 22245689999999
Q ss_pred ecCC-cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHH
Q 013571 280 DAGQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGA 358 (440)
Q Consensus 280 ~gG~-~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (440)
+||. +.|+||++|++.+|+|+.+.++.+++.+++++++++ +++++++++. ....|...+++++++.+.++++
T Consensus 238 ~gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~----~g~~~~i~~~---~~~~p~~~~~~~l~~~l~~a~~ 310 (377)
T 3isz_A 238 HAGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK----HNLKYRIEWN---LSGKPFLTKPGKLLDSITSAIE 310 (377)
T ss_dssp EECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEEE---ECCCCEECCTTHHHHHHHHHHH
T ss_pred ECCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCeEEEEE---ecCCCCcCCCCHHHHHHHHHHH
Confidence 9998 899999999999999999999999999999988763 6888888762 1233334557889999999999
Q ss_pred hhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 359 SMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 359 ~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
+.+|.++.. ..+.|+||++++.+. +|++. +||... .+|++||+++++++.+++++|++++.+++.+
T Consensus 311 ~~~g~~~~~--~~~~g~tDa~~~~~~g~~~v~--~Gp~~~------~~H~~~E~i~~~~l~~~~~i~~~~i~~ll~~ 377 (377)
T 3isz_A 311 ETIGITPKA--ETGGGTSDGRFIALMGAEVVE--FGPLNS------TIHKVNECVSVEDLGKCGEIYHKMLVNLLDS 377 (377)
T ss_dssp HHHSCCCEE--EECSSCCSHHHHHTTTCEEEE--CCSBCT------TTTSTTCEEEHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHhCCCCee--eccCcccHHHHHHHcCCCEEE--ECCCCC------cccCCCCcEEHHHHHHHHHHHHHHHHHHhhC
Confidence 977986542 456789999999887 66654 677643 3999999999999999999999999999863
No 9
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.3e-50 Score=398.79 Aligned_cols=359 Identities=18% Similarity=0.189 Sum_probs=294.6
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecC-------CCceEEEEEcCC----CCC
Q 013571 43 ELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV-------AKTGIVASVGSG----GEP 111 (440)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nv~~~~~~~----~~~ 111 (440)
....+++.++ +++++++++|+++||+|++|.++++||.++|+++|++++.+. +..|++++++++ ++|
T Consensus 14 ~~~~~~~~~~--~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~ 91 (396)
T 3rza_A 14 NLYFQGMINE--QRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVP 91 (396)
T ss_dssp -----CCSCH--HHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CC
T ss_pred ceeEEEeecH--HHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCC
Confidence 3455677777 999999999999999999999999999999999999987653 367899999764 469
Q ss_pred EEEEEEecccCCCCCCCCCcccccCCCcccccch-------hHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cc
Q 013571 112 WFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGH-------DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GG 183 (440)
Q Consensus 112 ~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~-------k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G 183 (440)
+|+|.|||||||+++ .|+.....+|++||||. |++++++|+++++|++.+. ++++|.|+|+++||.+ .|
T Consensus 92 ~i~l~aH~D~vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~G 168 (396)
T 3rza_A 92 KLYLTSHMDTVVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIG 168 (396)
T ss_dssp CEEEEEECCBCSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGGTSHH
T ss_pred eEEEEEECCccCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEcccccccHh
Confidence 999999999999764 34222233499999994 4899999999999998764 6899999999999954 68
Q ss_pred hHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhc
Q 013571 184 AYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVS 263 (440)
Q Consensus 184 ~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~ 263 (440)
++.+.+++. +.++.+..++ +.+.|.+... .+|..+++|+++|+++|+|.|+.|+||+..+++++.+|+...
T Consensus 169 a~~~~~~~~--~~~~~~~~~~--~~~~g~i~~~----~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~- 239 (396)
T 3rza_A 169 AKELNSELL--DADFGYAIDA--SADVGTTVVG----APTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQ- 239 (396)
T ss_dssp HHHCCGGGC--CCSEEEEEEE--SSCTTCEEEE----ECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCEE-
T ss_pred Hhhhchhhc--ccceEEEEec--CCCcceEEEc----CCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccCC-
Confidence 888865533 3577776664 3344544322 368899999999999999999999999999999999986531
Q ss_pred ccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCc
Q 013571 264 RETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPAT 343 (440)
Q Consensus 264 ~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (440)
.+ ...+++++.|+||.+.|+||++|++.+++|+.+.++.+++.++++++++..+..+|+++++++ ...+|+.
T Consensus 240 --~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~i~~----~~~~p~~ 311 (396)
T 3rza_A 240 --VD--EITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTV----EQSYPGF 311 (396)
T ss_dssp --EE--TTEEEEEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE----EEEECCE
T ss_pred --CC--CCceeeeeEEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEE----EeccCCc
Confidence 11 247899999999999999999999999999999999999999999999999888999998887 4556665
Q ss_pred --CCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013571 344 --VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIG 420 (440)
Q Consensus 344 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~ 420 (440)
++++++++.+++++++. |.+.. ...+.|+||+++|.+. +|+++ +|++.. .+|++||+++++++..+
T Consensus 312 ~~~~d~~l~~~~~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~giP~~~--~g~g~~------~~H~~~E~v~~~~l~~~ 380 (396)
T 3rza_A 312 KINDNEAVVKIAQESARNL-GLSAN--TIISGGGSDGSIINTFGIPSVI--LGVGYE------KIHTTNERMPIKSLNLL 380 (396)
T ss_dssp ECCTTSHHHHHHHHHHHHT-TCCCC--EEECSSCCHHHHHGGGTCCEEE--EECCCB------STTSTTCEEEHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHc-CCCce--ecccceeccHHHHhhCCCcEEE--ECCCCC------CCCCCcceeEHHHHHHH
Confidence 56889999999999986 87543 2467789999999887 99876 454432 39999999999999999
Q ss_pred HHHHHHHHHHHhcc
Q 013571 421 AALHAAVAISYLDN 434 (440)
Q Consensus 421 ~~~~~~~~~~~~~~ 434 (440)
+++|+.++.++..+
T Consensus 381 ~~~~~~~~~~l~~~ 394 (396)
T 3rza_A 381 ASQVLEIIKIVARQ 394 (396)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998754
No 10
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=5.9e-49 Score=400.33 Aligned_cols=375 Identities=12% Similarity=0.067 Sum_probs=296.1
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCC--Ccc------hHHHHHHHHHHHHhCCCceeecC--------C-----Cc
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPEL--GFE------EYETSQLVRSELDSLGIEYTWPV--------A-----KT 99 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~--s~~------e~~~~~~l~~~l~~~G~~~~~~~--------~-----~~ 99 (440)
.+++.++++.++ +++++++++|++|||+ |++ +.++++||.++|+++|++++... + .+
T Consensus 13 ~~~i~~~i~~~~--~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~ 90 (485)
T 3dlj_A 13 LEKVFQYIDLHQ--DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPP 90 (485)
T ss_dssp HHHHHHHHHHTH--HHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCC
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCc
Confidence 677888888877 9999999999999999 877 57899999999999999987632 2 35
Q ss_pred eEEEEEcCC-CCCEEEEEEecccCCCCC---CCCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEE
Q 013571 100 GIVASVGSG-GEPWFGLRAEMDALPLQE---MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVK 171 (440)
Q Consensus 100 nv~~~~~~~-~~~~i~~~~H~D~vp~~~---~~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~ 171 (440)
|++++++++ ++|+|+|+|||||||+++ |...||.. .++|++|||| ||++++++|+|+++|++.+.+++++|.
T Consensus 91 ~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~ 170 (485)
T 3dlj_A 91 VILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIK 170 (485)
T ss_dssp EEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE
T ss_pred EEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCccEE
Confidence 899999765 468999999999999875 34457875 4789999999 479999999999999998888999999
Q ss_pred EEEeccCCc-ccchHHHHHcCC---CCCCCEEEEeccCCCC-CCCcccccCCCcccceeEEEEEEEecCC--CCCCCCCC
Q 013571 172 LVFQPGEEG-YGGAYYMIKEGA---VDKFQGMFGIHISPVL-PTGTVGSRPGPLLAGSGRFTAVIKGKGG--HAAMPQDT 244 (440)
Q Consensus 172 ~~~~~dEE~-~~G~~~l~~~~~---~~~~d~~~~~~~~~~~-~~g~~~~~~g~~~~g~~~~~i~v~G~~~--Hss~p~~g 244 (440)
|+|+++||. +.|++.+++++. ++++|+++++|+.... ....+ . ..++|..+++|+++|+++ |+|. .|
T Consensus 171 ~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~--~g~~g~~~~~i~v~G~~~~~H~~~--~g 244 (485)
T 3dlj_A 171 FIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAI--T--YGTRGNSYFMVEVKCRDQDFHSGT--FG 244 (485)
T ss_dssp EEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEE--E--EEECEEEEEEEEEESCSSCEETTT--ST
T ss_pred EEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeE--E--EeccceEEEEEEEEECCCCCcCCC--CC
Confidence 999999995 469999998753 4578999998853211 11121 1 135799999999999999 9997 34
Q ss_pred CCHHHHHHHHHHHHHHhhccc-----------CCCC----------------------------------------CCeE
Q 013571 245 RDPVLAASFAILTLQHIVSRE-----------TDPL----------------------------------------EARV 273 (440)
Q Consensus 245 ~nAi~~~~~~i~~l~~~~~~~-----------~~~~----------------------------------------~~~t 273 (440)
.||+..+..++..|+.+.++. .++. ..++
T Consensus 245 ~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 324 (485)
T 3dlj_A 245 GILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPS 324 (485)
T ss_dssp TSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTSCE
T ss_pred ccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcCCc
Confidence 555555555555554443221 1110 1578
Q ss_pred EEEEEEecC----CcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcC--CeEEEEEeccccCCCCCcCC--
Q 013571 274 VTVGFIDAG----QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQ--CSATIDFLEEKMRHYPATVN-- 345 (440)
Q Consensus 274 ~~~~~i~gG----~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 345 (440)
++++.|+|| .+.|+||++|++++++|+.+.++.+.+.++|+++++..+..+| .++++++ ...+|+...
T Consensus 325 ~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~----~~~~pp~~~~~ 400 (485)
T 3dlj_A 325 LSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSM----TLGLHPWIANI 400 (485)
T ss_dssp EEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEE----EEEECCEECCT
T ss_pred eEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEE----cCCCCceeCCC
Confidence 999999999 8999999999999999999999999999999999999998888 4788877 445566533
Q ss_pred CHHHHHHHHHHHHhhcCCCCcccCCCCcccccH-HHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 013571 346 DEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDF-SFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALH 424 (440)
Q Consensus 346 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~-~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~ 424 (440)
++++++.+.+++++++|.++... ..+|++|+ .+|.+.+|..++++|.+... ...|++||+++++++..++++|
T Consensus 401 d~~~~~~~~~a~~~~~G~~~~~~--~~ggs~Dfa~~~~~~~p~~~i~~g~g~~~----~~~H~p~E~i~~~~l~~g~~~l 474 (485)
T 3dlj_A 401 DDTQYLAAKRAIRTVFGTEPDMI--RDGSTIPIAKMFQEIVHKSVVLIPLGAVD----DGEHSQNEKINRWNYIEGTKLF 474 (485)
T ss_dssp TSHHHHHHHHHHHHHHSSCCEEE--EESSCCHHHHHHHHHTC--CEECCCBCTT----CCTTSTTCEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCceec--CCCCchhHHHHHHHHhCCCEEEecCCCCC----CCCcCCCCCccHHHHHHHHHHH
Confidence 56899999999999889866432 46678895 57777677666667765431 2489999999999999999999
Q ss_pred HHHHHHHhc
Q 013571 425 AAVAISYLD 433 (440)
Q Consensus 425 ~~~~~~~~~ 433 (440)
+.++.++..
T Consensus 475 ~~~l~~la~ 483 (485)
T 3dlj_A 475 AAFFLEMAQ 483 (485)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999998854
No 11
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.8e-50 Score=394.33 Aligned_cols=344 Identities=16% Similarity=0.137 Sum_probs=276.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCc-eeecCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCCccc
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHK 133 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~~ 133 (440)
+++++++++|+++||+|++|.++++||.++|+++|++ ++....++|++++++++++|+|+|.|||||||+++ .+++.
T Consensus 13 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~~ 90 (369)
T 3tx8_A 13 GDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPSR 90 (369)
T ss_dssp SCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSCE
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCCe
Confidence 7789999999999999999999999999999999884 44444567899999776669999999999999875 44443
Q ss_pred ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc---cchHHHHHcCC-CCCCCEEEEeccCC
Q 013571 134 SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY---GGAYYMIKEGA-VDKFQGMFGIHISP 206 (440)
Q Consensus 134 ~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~---~G~~~l~~~~~-~~~~d~~~~~~~~~ 206 (440)
. ++|++|||| +|++++++|+|+++|++. ..++++|.|+|++|||.+ .|+..+++++. .-+.|+++..++..
T Consensus 91 ~-~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~~ 168 (369)
T 3tx8_A 91 V-EDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPTG 168 (369)
T ss_dssp E-CSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECCCCT
T ss_pred E-ECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEEeCCCC
Confidence 3 589999999 369999999999999874 368999999999999965 59999988752 12467777755432
Q ss_pred CCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC--CC-CCeEEEEEEEecCC
Q 013571 207 VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETD--PL-EARVVTVGFIDAGQ 283 (440)
Q Consensus 207 ~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~--~~-~~~t~~~~~i~gG~ 283 (440)
+.+. ..++|..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..+..+ +. ...+++++.|+||.
T Consensus 169 ----~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG~ 240 (369)
T 3tx8_A 169 ----GWIE----AGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGV 240 (369)
T ss_dssp ----TCEE----ESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEECS
T ss_pred ----Ccee----eecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECCC
Confidence 2222 2357999999999999999999999999999999999999987543221 11 24689999999999
Q ss_pred cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCC
Q 013571 284 AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGE 363 (440)
Q Consensus 284 ~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (440)
+.|+||++|++++|+|+.|.++.+++.++|++++++.+ .++++++++.. ..++++ ..++++++.+.+++ |.
T Consensus 241 ~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~-~~g~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~----g~ 311 (369)
T 3tx8_A 241 ANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDG---AGGALP-GLGQQVTSGLIDAV----GR 311 (369)
T ss_dssp BTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-STTEEEEEEEE---ECCBCC-CTTSHHHHHHHHHH----CG
T ss_pred CCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-cCCeEEEEEec---CCCCCC-CCCCHHHHHHHHHc----CC
Confidence 99999999999999999999999999999999988665 56777776431 334433 44677777776653 54
Q ss_pred CCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 013571 364 PNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAI 429 (440)
Q Consensus 364 ~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~ 429 (440)
.. +....|+||+++|.+. +|++. +||+.. ..+|++||+++++++.+++++|++++.
T Consensus 312 ~~---~~~~~ggtD~~~~~~~giP~~~--~Gpg~~-----~~~H~~~E~v~~~~l~~~~~~l~~~l~ 368 (369)
T 3tx8_A 312 EK---IRAKFGWTDVSRFSAMGIPALN--FGAGDP-----SFAHKRDEQCPVEQITDVAAILKQYLS 368 (369)
T ss_dssp GG---EEECCSCCTHHHHHTTTCCEEE--ECSSCS-----SSSSCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred CC---CcccccccchHHHhhCCCCEEE--ECCCCh-----hhCCCCCcEEEHHHHHHHHHHHHHHhh
Confidence 11 1345678999999987 99864 777542 359999999999999999999999875
No 12
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=6.5e-49 Score=387.44 Aligned_cols=345 Identities=19% Similarity=0.217 Sum_probs=289.1
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecC-------CCceEEEEEcCC--CCCEEEEEEecccCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV-------AKTGIVASVGSG--GEPWFGLRAEMDALPLQ 125 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nv~~~~~~~--~~~~i~~~~H~D~vp~~ 125 (440)
+++++++++|+++||+|++|.++++||.++|+++|++++.+. ++.|++++++++ ++|+|+|.|||||||++
T Consensus 6 ~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~ 85 (373)
T 3gb0_A 6 ERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPG 85 (373)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSC
T ss_pred HHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCC
Confidence 789999999999999999999999999999999999987754 257899999764 46999999999999976
Q ss_pred CCCCCcccccCCCcccccch-------hHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCC
Q 013571 126 EMVEWEHKSKNNGKMHGCGH-------DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQ 197 (440)
Q Consensus 126 ~~~~~~~~~~~~g~i~GrG~-------k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d 197 (440)
+ .|. ...++|++||||+ |++++++|++++.|++.+. ++++|.|+|+++||.+ .|++.+..++. +.+
T Consensus 86 ~--~~~-p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~~ 159 (373)
T 3gb0_A 86 N--GIK-PSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TAK 159 (373)
T ss_dssp S--SCC-CEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--CCS
T ss_pred C--CcC-cEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--CCC
Confidence 5 232 2456799999984 4899999999999998874 7899999999999954 68888855432 457
Q ss_pred EEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEE
Q 013571 198 GMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTV 276 (440)
Q Consensus 198 ~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~ 276 (440)
+.+..++ +.+.+.+.. ..+|..+++|+++|+++|++ .|+.|+||+..+++++.+|+.. .. ....++++
T Consensus 160 ~~~~~~~--~~~~g~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~--~~~~~~~v 228 (373)
T 3gb0_A 160 YGYALDS--DGKVGEIVV----AAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RI--DSETTANI 228 (373)
T ss_dssp EEEEEEE--CSCTTEEEE----EECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EE--ETTEEEEE
T ss_pred EEEEEcC--CCCCCeEEE----cCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cC--CCccccce
Confidence 7777664 334444432 23688999999999999999 8999999999999999988652 11 13478899
Q ss_pred EEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCc--CCCHHHHHHHH
Q 013571 277 GFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPAT--VNDEKMYEHGK 354 (440)
Q Consensus 277 ~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 354 (440)
+.|+||.+.|+||++|++.+++|+.+.++.+++.++++++++..+..+|+++++++ ...+|+. ++++++++.++
T Consensus 229 g~i~gG~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~~----~~~~~~~~~~~~~~l~~~~~ 304 (373)
T 3gb0_A 229 GRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEV----NVMYPGFKFADGDHVVEVAK 304 (373)
T ss_dssp EEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE----EEEECCEECCTTCHHHHHHH
T ss_pred eEEecCcccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEE----ecccCCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999888999998887 4455555 45889999999
Q ss_pred HHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 355 RVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
+++++. |.++. .....|+||+++|.+. +|++. +|++.. .+|++||+++++++..++++|++++.++
T Consensus 305 ~~~~~~-g~~~~--~~~~~g~~D~~~~~~~gip~~~--~g~~~~------~~H~~~E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 305 RAAEKI-GRTPS--LHQSGGGSDANVIAGHGIPTVN--LAVGYE------EIHTTNEKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp HHHHHT-TCCCE--EEECSSCCHHHHHHHTTCCEEE--EECCCB------STTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-CCCce--EecccCcchHHHHHhCCCCEEE--ecCCCC------cCcCCceEEEHHHHHHHHHHHHHHHHHh
Confidence 999986 87543 2467789999999987 99876 454432 3999999999999999999999999988
No 13
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=3e-49 Score=389.04 Aligned_cols=337 Identities=15% Similarity=0.080 Sum_probs=274.7
Q ss_pred HHHHHHHHHHHhCCCCC--c---chHHHHHHHHHHHHhCCCceeecC---CCceEEEEEcCCCCCEEEEEEecccCCCCC
Q 013571 55 EWMRRIRRRIHENPELG--F---EEYETSQLVRSELDSLGIEYTWPV---AKTGIVASVGSGGEPWFGLRAEMDALPLQE 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s--~---~e~~~~~~l~~~l~~~G~~~~~~~---~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~ 126 (440)
+++++++++|+++||+| + +|.++++||.++|+ |++++.+. +++|+++ ++++ |+|+|.+||||||.++
T Consensus 9 ~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~D~vp~~~ 83 (369)
T 2f7v_A 9 ASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHLDTVPDSP 83 (369)
T ss_dssp HHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEECCBCCCCS
T ss_pred HHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeeecccCCCC
Confidence 88999999999999998 7 88999999999999 99887642 5689999 9765 7899999999999986
Q ss_pred -CCCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-c-cchHHHHHcCCCCCCCEE
Q 013571 127 -MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-Y-GGAYYMIKEGAVDKFQGM 199 (440)
Q Consensus 127 -~~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~-~G~~~l~~~~~~~~~d~~ 199 (440)
|...||.. .++|++|||| ||++++++|++++. ++++|.|+|++|||. + .|++.+++++. ++|++
T Consensus 84 ~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~~~--~~d~~ 154 (369)
T 2f7v_A 84 HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLARGL--PYDAV 154 (369)
T ss_dssp SCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTTCC--CCSEE
T ss_pred CCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhcCC--CCCEE
Confidence 77778875 5689999999 48999999999876 678999999999996 5 69999998765 68998
Q ss_pred EEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCC-CCCCHHHHHHHHHHHHHHhhcccC----CCCCCeEE
Q 013571 200 FGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQ-DTRDPVLAASFAILTLQHIVSRET----DPLEARVV 274 (440)
Q Consensus 200 ~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~-~g~nAi~~~~~~i~~l~~~~~~~~----~~~~~~t~ 274 (440)
++.++.. +.+ ...++|..+++|+++|+++|+|.|+ .|.||+..+++++.+|+++..+.. ++...+++
T Consensus 155 i~~e~~~----~~i----~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 226 (369)
T 2f7v_A 155 LVAEPTM----SEA----VLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHARFGGLTGLRF 226 (369)
T ss_dssp EECCCST----TCB----BCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCEETTEESCEE
T ss_pred EECCCCC----Ccc----eeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccccCcccCCce
Confidence 8876431 222 2345799999999999999999999 899999999999999988754321 22112699
Q ss_pred EEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCC-HHHHHHH
Q 013571 275 TVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVND-EKMYEHG 353 (440)
Q Consensus 275 ~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 353 (440)
+++.|+||.+.|+||++|++++|+|+.|.++.+++.++++++++.. +++++++.. ...+|+...+ +++++.+
T Consensus 227 ~vg~i~gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~l~~~~ 299 (369)
T 2f7v_A 227 NIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPA----AAHFEETFR---GPSLPSGDIARAEERRLA 299 (369)
T ss_dssp EEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSC----CSEEEEEEE---ECCBSCSSHHHHHHHHHH
T ss_pred EEEEeecCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHHh----cCceEEEec---cCCCCccCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999987632 466776652 1345666555 8999999
Q ss_pred HHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013571 354 KRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAIS 430 (440)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~ 430 (440)
++++++.+|.++. ....|++|+++|.+. +|++ .+||+.. ..+|++||+++++++.+++++|+.++.+
T Consensus 300 ~~a~~~~~g~~~~---~~~~g~~D~~~~~~~g~p~v--~~Gpg~~-----~~~H~~~E~~~~~~l~~~~~~~~~~~~~ 367 (369)
T 2f7v_A 300 ARDVADALDLPIG---NAVDFWTEASLFSAGGYTAL--VYGPGDI-----AQAHTADEFVTLAQLQRYVESVNRIING 367 (369)
T ss_dssp HHHHHHHTTCCBC---CCBSSCCTHHHHHHTTCCEE--ECCSSCG-----GGTTCTTCEEEHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhCCCCC---ccccccCcHHHHhhCCCCEE--EECCCCc-----cccCCCCceEEHHHHHHHHHHHHHHHHh
Confidence 9999998887553 357899999999988 8976 4777532 3599999999999999999999998764
No 14
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=2.2e-48 Score=396.10 Aligned_cols=373 Identities=12% Similarity=0.049 Sum_probs=299.0
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHhCCCCCcch------HHHHHHHHHHHHhCCCceeecC--------CC-----ceEE
Q 013571 42 RELLDSAREPEFFEWMRRIRRRIHENPELGFEE------YETSQLVRSELDSLGIEYTWPV--------AK-----TGIV 102 (440)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e------~~~~~~l~~~l~~~G~~~~~~~--------~~-----~nv~ 102 (440)
.++.++++.+. +++++++++|+++||+|++| .++++||.++|+++|++++.+. ++ +|++
T Consensus 9 ~~~~~~~~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (479)
T 2zog_A 9 KAVFQYIDENQ--DRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILL 86 (479)
T ss_dssp HHHHHHHHHTH--HHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEE
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEE
Confidence 34566666666 89999999999999999876 7899999999999999987643 22 7999
Q ss_pred EEEcCC-CCCEEEEEEecccCCCCCC---CCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEE
Q 013571 103 ASVGSG-GEPWFGLRAEMDALPLQEM---VEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVF 174 (440)
Q Consensus 103 ~~~~~~-~~~~i~~~~H~D~vp~~~~---~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~ 174 (440)
++++++ ++|+|+|.|||||||.++. ...||.. .++|++|||| ||++++++|++++.|++.+.+++++|.|+|
T Consensus 87 a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~ 166 (479)
T 2zog_A 87 GKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCL 166 (479)
T ss_dssp EEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEE
T ss_pred EEecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEE
Confidence 999765 4589999999999998653 3446765 4689999999 479999999999999998888899999999
Q ss_pred eccCCc-ccchHHHHHcC---CCCCCCEEEEeccCCCCC-CCcccccCCCcccceeEEEEEEEecC--CCCCCCCCCCCH
Q 013571 175 QPGEEG-YGGAYYMIKEG---AVDKFQGMFGIHISPVLP-TGTVGSRPGPLLAGSGRFTAVIKGKG--GHAAMPQDTRDP 247 (440)
Q Consensus 175 ~~dEE~-~~G~~~l~~~~---~~~~~d~~~~~~~~~~~~-~g~~~~~~g~~~~g~~~~~i~v~G~~--~Hss~p~~g~nA 247 (440)
++|||. +.|++.+++++ .+.++|++++.++....+ .+.+ ...++|..+++|+++|++ +|||.+ |.||
T Consensus 167 ~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i----~~~~~G~~~~~i~v~G~~~~~Hs~~~--g~~a 240 (479)
T 2zog_A 167 EGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCI----TYGLRGICYFFIEVECSDKDLHSGVY--GGSV 240 (479)
T ss_dssp ESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEE----EEEECEEEEEEEEEECCSSCEEHHHH--TTTS
T ss_pred ecccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEE----EEecceEEEEEEEEEeCCCCCccCCC--CCCc
Confidence 999995 46999999875 444689999887532111 2222 124589999999999999 999985 7899
Q ss_pred HHHHHHHHHHHHHhhccc---------------------------CC---------C-----------C----CCeEEEE
Q 013571 248 VLAASFAILTLQHIVSRE---------------------------TD---------P-----------L----EARVVTV 276 (440)
Q Consensus 248 i~~~~~~i~~l~~~~~~~---------------------------~~---------~-----------~----~~~t~~~ 276 (440)
+..+++++..|+++..+. .+ . . ..+++++
T Consensus 241 i~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 320 (479)
T 2zog_A 241 HEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSL 320 (479)
T ss_dssp CCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEE
T ss_pred cCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEE
Confidence 999999998887654321 00 0 0 1478999
Q ss_pred EEEecC----CcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHc--CCeEEEEEeccccCCCCC--cCCCHH
Q 013571 277 GFIDAG----QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVH--QCSATIDFLEEKMRHYPA--TVNDEK 348 (440)
Q Consensus 277 ~~i~gG----~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~ 348 (440)
+.|+|| .+.|+||++|++++++|+.|+++.+++.++++++++..+..+ +..+++++ ...+|+ .+.+++
T Consensus 321 ~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~d~~ 396 (479)
T 2zog_A 321 HGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYM----GHGGKPWVSDFNHP 396 (479)
T ss_dssp EEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEE----EEEECCEECCTTSH
T ss_pred eeeecCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEe----cCCCCceecCCCCH
Confidence 999998 899999999999999999999999999999999999887665 56677766 233444 455789
Q ss_pred HHHHHHHHHHhhcCCCCcccCCCCcccccH-HHHHHH--hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHH
Q 013571 349 MYEHGKRVGASMVGEPNVHLTPVEMGAEDF-SFYTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHA 425 (440)
Q Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~-~~~~~~--~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~ 425 (440)
+++.+.+++++++|.++.. ....|++|+ ++|.+. +|++++++|+... .+|++||+++++++.+++++|+
T Consensus 397 ~~~~~~~a~~~~~g~~~~~--~~~~gs~d~~~~~~~~~~~p~~~~g~g~~~~------~~H~~~E~i~~~~l~~~~~~~~ 468 (479)
T 2zog_A 397 HYQAGRRALKTVFGVEPDL--TREGGSIPVTLTFQEATGKNVMLLPVGSADD------GAHSQNEKLNRLNYIEGTKMLA 468 (479)
T ss_dssp HHHHHHHHHHHHHSSCCEE--EEESSCCTHHHHHHHHHCSEEEECCCBCTTC------CTTSTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcee--cCCCCccchHHHHHHHhCCCEEEecCCCCcc------CCCCCCCcEeHHHHHHHHHHHH
Confidence 9999999999988876543 245788997 577764 7877655665432 4999999999999999999999
Q ss_pred HHHHHHhcc
Q 013571 426 AVAISYLDN 434 (440)
Q Consensus 426 ~~~~~~~~~ 434 (440)
.++.+++..
T Consensus 469 ~~~~~~~~~ 477 (479)
T 2zog_A 469 AYLYEVSQL 477 (479)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999999764
No 15
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=6.9e-49 Score=399.73 Aligned_cols=374 Identities=13% Similarity=0.080 Sum_probs=292.7
Q ss_pred hHHHHHhcCCcchHH-HHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhCCCceeec--CCCceEEEEEcCC--CCCE
Q 013571 41 TRELLDSAREPEFFE-WMRRIRRRIHENPELGFEE---YETSQLVRSELDSLGIEYTWP--VAKTGIVASVGSG--GEPW 112 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~ps~s~~e---~~~~~~l~~~l~~~G~~~~~~--~~~~nv~~~~~~~--~~~~ 112 (440)
.+++.++++.++ + ++++++++|++|||+|++| .++++||.++|+++|++++.. .++.|++++++++ ++|+
T Consensus 31 m~~~~~~~~~~~--~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~ 108 (481)
T 2pok_A 31 QEQIEKFEKDHV--AQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKT 108 (481)
T ss_dssp HHHHHHHHHCHH--HHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCE
T ss_pred HHHHHHHHHhhh--hHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCe
Confidence 356777788876 8 9999999999999999876 899999999999999998764 3578999999753 4589
Q ss_pred EEEEEecccCCCCCCCCC---cccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cch
Q 013571 113 FGLRAEMDALPLQEMVEW---EHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGA 184 (440)
Q Consensus 113 i~~~~H~D~vp~~~~~~~---~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~ 184 (440)
|+|.|||||||.++.+.| ||.. .++|++|||| ||++++++|+|++.|++.+..++++|.|+|++|||.+ .|+
T Consensus 109 i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~ 188 (481)
T 2pok_A 109 LIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDL 188 (481)
T ss_dssp EEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTH
T ss_pred EEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhH
Confidence 999999999999775556 7774 5689999999 4899999999999999885578999999999999954 688
Q ss_pred HHHHHcC--CCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecC--CCCCCCCCCCCHHHHHHHHHHHHHH
Q 013571 185 YYMIKEG--AVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKG--GHAAMPQDTRDPVLAASFAILTLQH 260 (440)
Q Consensus 185 ~~l~~~~--~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~--~Hss~p~~g~nAi~~~~~~i~~l~~ 260 (440)
+.+++++ .++++|++++.++.... .+...+ ...++|..+++|+++|++ +||+.|+.|.|||..+++++.+|++
T Consensus 189 ~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~i--~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~ 265 (481)
T 2pok_A 189 DKYLEKHADKLRGADLLVWEQGTKNA-LEQLEI--SGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRA 265 (481)
T ss_dssp HHHHHHHHHHHTTCSEEECSCCBBCT-TSCEEE--ECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBC
T ss_pred HHHHHHhHhhccCCCEEEECCCCccC-CCCeeE--EEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhC
Confidence 8887754 13347888876532111 111111 234689999999999999 8999999999999999999999876
Q ss_pred hh-----------------------ccc--------------CCC-------------CCCeEEEEEEEecCC----ccc
Q 013571 261 IV-----------------------SRE--------------TDP-------------LEARVVTVGFIDAGQ----AGN 286 (440)
Q Consensus 261 ~~-----------------------~~~--------------~~~-------------~~~~t~~~~~i~gG~----~~n 286 (440)
.. .+. .++ ...+++|++.|+||. +.|
T Consensus 266 ~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~~~N 345 (481)
T 2pok_A 266 ADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKT 345 (481)
T ss_dssp TTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSSCCC
T ss_pred CCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCCCCe
Confidence 42 000 000 024799999999986 789
Q ss_pred ccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCc
Q 013571 287 IIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNV 366 (440)
Q Consensus 287 ~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 366 (440)
+||++|++++++|+.|+++.+++.++++++++..+. .++++++.. . .+++ ..+.++++++.+.+++++.+|.++.
T Consensus 346 vIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~~~--~-~p~~-~~~~d~~l~~~~~~a~~~~~g~~~~ 420 (481)
T 2pok_A 346 ILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVELYYTL--G-EMSY-RSDMSAPAILNVIELAKKFYPQGVS 420 (481)
T ss_dssp EECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEEEEEE--E-ECCB-CCCSCSHHHHHHHHHHTTTCTTCEE
T ss_pred eccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEEEEcc--C-CCcc-cCCCCCHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999999999999999999986543 455555432 0 1222 3456899999999999998888653
Q ss_pred ccCCCCcccccHHHHHHH--hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 367 HLTPVEMGAEDFSFYTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 367 ~~~~~~~g~tD~~~~~~~--~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
.. ....|++|+++|.+. +|++. +||+.. ...+|++||+++++++.+++++|++++.++
T Consensus 421 ~~-~~~gg~~D~~~~~~~~g~p~v~--~G~g~~----~~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 421 VL-PTTAGTGPMHTVFDALEVPMVA--FGLGNA----NSRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp EE-SCBSSCCTHHHHHHHHCCCEEB--CCSBCT----TCCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred cc-ccCCCCCchHHHHHHcCCCEEE--ecCCCc----ccCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 22 334444599999875 78754 666542 135999999999999999999999998754
No 16
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=4.6e-49 Score=385.70 Aligned_cols=333 Identities=14% Similarity=0.093 Sum_probs=270.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcC-C-CCCEEEEEEecccCCCCC-CCCCc
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGS-G-GEPWFGLRAEMDALPLQE-MVEWE 131 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~-~-~~~~i~~~~H~D~vp~~~-~~~~~ 131 (440)
+++++++++|+++||+|++|.++++|+.++|+++|++++.+ .+|+++++++ + ++|+|+|.|||||||.++ |...|
T Consensus 11 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p 88 (356)
T 3ct9_A 11 AEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDP 88 (356)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------
T ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCC
Confidence 78999999999999999999999999999999999998766 7899999976 4 368999999999999876 45567
Q ss_pred cccc-CCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-c-cchHHHHHcCCCCCCCEEEEeccC
Q 013571 132 HKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-Y-GGAYYMIKEGAVDKFQGMFGIHIS 205 (440)
Q Consensus 132 ~~~~-~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~-~G~~~l~~~~~~~~~d~~~~~~~~ 205 (440)
|... ++|++|||| +|++++++|++++.|++.+ ++++|.|+|++|||. + .|++.+++++ .++|+++..++.
T Consensus 89 ~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~~i~~ep~ 164 (356)
T 3ct9_A 89 FTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSFAIVGEPT 164 (356)
T ss_dssp CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSEEEECCSB
T ss_pred CccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCEEEEcCCC
Confidence 8754 589999999 3689999999999999876 889999999999997 5 6999998876 367887776643
Q ss_pred CCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCC-CCCeEEEEEEEecCCc
Q 013571 206 PVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDP-LEARVVTVGFIDAGQA 284 (440)
Q Consensus 206 ~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~-~~~~t~~~~~i~gG~~ 284 (440)
. +.+ ...++|..+++|+++|+++|++.| .|.|||..+++++.+|+.+..+..++ ...++++++.|+||.+
T Consensus 165 ~----~~i----~~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~gG~~ 235 (356)
T 3ct9_A 165 E----MQP----AIAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINAGTQ 235 (356)
T ss_dssp T----TCC----EEEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEEEEEEECSS
T ss_pred C----ceE----EEeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEeeEEecCCc
Confidence 2 222 223578899999999999999999 99999999999999998875443333 3467999999999999
Q ss_pred ccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCC--cCCCHHHHHHHHHHHHhhcC
Q 013571 285 GNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA--TVNDEKMYEHGKRVGASMVG 362 (440)
Q Consensus 285 ~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g 362 (440)
.|+||++|++++++|+.+.++.+++.++++++++. +++++. ..+|+ .+.++++++.+.+++++
T Consensus 236 ~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~-------~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~--- 300 (356)
T 3ct9_A 236 HNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC-------DAKARS-----FRLNSSRIDEKHPFVQKAVKMGRI--- 300 (356)
T ss_dssp TTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS-------EEEESC-----SCSCCEECCTTSHHHHHHHHTTCC---
T ss_pred CCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC-------eEEEee-----ccCCCCCCCCCCHHHHHHHHHhcC---
Confidence 99999999999999999999999999999998752 444321 33444 34678899988766542
Q ss_pred CCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 363 EPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 363 ~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
+ ....++||++.+ .+|++ .+||+.. ..+|++||+++++++.+++++|+.++.+++
T Consensus 301 --~----~~~~g~tD~~~~--~~p~v--~~G~g~~-----~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 355 (356)
T 3ct9_A 301 --P----FGSPTLSDQALM--SFASV--KIGPGRS-----SRSHTAEEYIMLKEIEEAIGIYLDLLDGLK 355 (356)
T ss_dssp --C----EEECSCCGGGGC--CSCEE--ECCSSBG-----GGTTSTTCEEEHHHHHHHHHHHHHHHTTCC
T ss_pred --C----cccccccchhhc--CCCEE--EECCCcc-----ccCcCCCcEEEHHHHHHHHHHHHHHHHHhh
Confidence 1 246789999832 37875 4676532 348999999999999999999999988764
No 17
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=3.6e-48 Score=393.09 Aligned_cols=377 Identities=13% Similarity=0.047 Sum_probs=292.2
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcc----------hHHHHHHHHHHHHhCCCc---eee--cC-CCceEEEE
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFE----------EYETSQLVRSELDSLGIE---YTW--PV-AKTGIVAS 104 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~----------e~~~~~~l~~~l~~~G~~---~~~--~~-~~~nv~~~ 104 (440)
.+++.++++.++ .+++++++++|++|||+|++ |.++++|+.++|+++|++ ++. .. .++|++++
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~ 83 (472)
T 3pfe_A 5 PQGLYDYICQQW-QEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFME 83 (472)
T ss_dssp HHHHHHHHHHHH-HHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEE
T ss_pred HHHHHHHHHHhh-HHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEE
Confidence 345556665531 15789999999999999965 889999999999999995 432 22 36899999
Q ss_pred EcCCCCCEEEEEEecccCCCCC-CC--CCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEecc
Q 013571 105 VGSGGEPWFGLRAEMDALPLQE-MV--EWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPG 177 (440)
Q Consensus 105 ~~~~~~~~i~~~~H~D~vp~~~-~~--~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~d 177 (440)
+++.++|+|+|+|||||||+++ |. ..||.. .++|++|||| ||++++++|+|+++|++.+..+. +|.|+|++|
T Consensus 84 ~~g~~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~~ 162 (472)
T 3pfe_A 84 IPGQIDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEAC 162 (472)
T ss_dssp ECCSEEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEESC
T ss_pred EcCCCCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEeC
Confidence 9765458999999999999864 34 567875 5789999999 47999999999999999886666 999999999
Q ss_pred CCcc-cchHHHHHcC--CCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEE--EEEEecCCCCCCCCCC-CCHHHHH
Q 013571 178 EEGY-GGAYYMIKEG--AVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFT--AVIKGKGGHAAMPQDT-RDPVLAA 251 (440)
Q Consensus 178 EE~~-~G~~~l~~~~--~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~--i~v~G~~~Hss~p~~g-~nAi~~~ 251 (440)
||.+ .|++.+++++ .+.++|+++++|+... ..+...+. ..++|..+++ |+++|+++|+|+|+.+ .|||..+
T Consensus 163 EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~i~--~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~~ 239 (472)
T 3pfe_A 163 EESGSYDLPFYIELLKERIGKPSLVICLDSGAG-NYEQLWMT--TSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVA 239 (472)
T ss_dssp GGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCS-CSSSCEEE--EEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHHH
T ss_pred CCCCChhHHHHHHHhHhhccCCCEEEEeCCCcC-CCCCeeEE--EeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHHH
Confidence 9954 7999998875 2346899999885422 11221222 2346777766 5558999999998754 5999999
Q ss_pred HHHHHHHHHhh-cc--------cC-----------------------------CCCC------------CeEEEEEEEec
Q 013571 252 SFAILTLQHIV-SR--------ET-----------------------------DPLE------------ARVVTVGFIDA 281 (440)
Q Consensus 252 ~~~i~~l~~~~-~~--------~~-----------------------------~~~~------------~~t~~~~~i~g 281 (440)
++++.+|++.. .+ .. ++.. .+|++++.|+|
T Consensus 240 ~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~g 319 (472)
T 3pfe_A 240 RQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADG 319 (472)
T ss_dssp HHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEES
T ss_pred HHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeec
Confidence 99999998762 10 00 0110 57999999999
Q ss_pred C----CcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccC-CCCCcC--CC-HHHHHHH
Q 013571 282 G----QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMR-HYPATV--ND-EKMYEHG 353 (440)
Q Consensus 282 G----~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~~~ 353 (440)
| .+.|+||++|++++++|+.+.++.+.+.++|+++++..+ .++++++++. .. .+|+.. .+ +.+++.+
T Consensus 320 G~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v~~----~~~~~pp~~~~~n~~~l~~~~ 394 (472)
T 3pfe_A 320 FPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDFKI----QNGGSKGWNAPLLSDWLAKAA 394 (472)
T ss_dssp CCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEEEE----CSCCBCCEECCCCCHHHHHHH
T ss_pred CcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEEEe----cCCCCCcccCCCCChHHHHHH
Confidence 7 699999999999999999999999999999999998764 5688888877 44 555543 23 4478999
Q ss_pred HHHHHhhcCCCCcccCCCCccccc--HHHHHHHhccc-eEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013571 354 KRVGASMVGEPNVHLTPVEMGAED--FSFYTQRMPAA-HFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAIS 430 (440)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~g~tD--~~~~~~~~p~v-~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~ 430 (440)
++++++++|.++.. ...|++| +++|.+.+|.+ ++++|++... ...|++||+++++++..++++|+.++.+
T Consensus 395 ~~a~~~~~G~~~~~---~~~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~----~~~H~p~E~i~~~~l~~g~~~l~~~l~~ 467 (472)
T 3pfe_A 395 SEASMTYYDKPAAY---MGEGGTIPFMSMLGEQFPKAQFMITGVLGPH----SNAHGPNEFLHLDMVKKLTSCVSYVLYS 467 (472)
T ss_dssp HHHHHHHHSSCCEE---EEESSCCHHHHHHHHHCTTCEEEEECCBCTT----CCTTSTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcee---ccCCCchhhHHHHHHHcCCCCEEEecCCCCC----CCCcCCCcceeHHHHHHHHHHHHHHHHH
Confidence 99999988986542 3456777 36677767776 6678875432 2499999999999999999999999998
Q ss_pred Hhcc
Q 013571 431 YLDN 434 (440)
Q Consensus 431 ~~~~ 434 (440)
+...
T Consensus 468 la~~ 471 (472)
T 3pfe_A 468 FSQK 471 (472)
T ss_dssp HHHC
T ss_pred Hhhc
Confidence 8643
No 18
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=4.5e-48 Score=379.78 Aligned_cols=335 Identities=16% Similarity=0.083 Sum_probs=273.9
Q ss_pred HHHHHHHHHHHhCCCCC---cchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcC---CCCCEEEEEEecccCCCCCCC
Q 013571 55 EWMRRIRRRIHENPELG---FEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGS---GGEPWFGLRAEMDALPLQEMV 128 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s---~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~---~~~~~i~~~~H~D~vp~~~~~ 128 (440)
+++++++++|+++||+| ++|.++++||.++|+++|++++.+. .|+++.+.+ +++|+|+|.|||||||. .
T Consensus 6 ~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~~--~~~~~~~~~~~~~~~~~i~l~aH~D~vp~---~ 80 (364)
T 2rb7_A 6 QHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERMD--HDGIPSVMVLPEKGRAGLLLMAHIDVVDA---E 80 (364)
T ss_dssp HHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEEE--ETTEEEEEECSBTTEEEEEEEEECCCCCC---C
T ss_pred HHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEec--CCCceEEEEEcCCCCCeEEEECccCcCCC---C
Confidence 78899999999999999 8899999999999999999987642 568888753 34589999999999985 4
Q ss_pred CCccccc-CCCcccccch---hHHHHHHHHHHHHHHhcccCC---Cce--EEEEEeccCCc-c-cchHHHHHcCCCCCCC
Q 013571 129 EWEHKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRL---KGT--VKLVFQPGEEG-Y-GGAYYMIKEGAVDKFQ 197 (440)
Q Consensus 129 ~~~~~~~-~~g~i~GrG~---k~~~a~~l~a~~~l~~~~~~~---~~~--v~~~~~~dEE~-~-~G~~~l~~~~~~~~~d 197 (440)
..||... ++|++||||+ |++++++|++++.|++.+.++ +++ |.|+|++|||. + .|++.+++++ ++|
T Consensus 81 ~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~d 157 (364)
T 2rb7_A 81 DDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RAD 157 (364)
T ss_dssp GGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EEE
T ss_pred CCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CCC
Confidence 5788754 5899999993 689999999999999877666 568 99999999995 4 5999998875 466
Q ss_pred EEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCC-C--CCeEE
Q 013571 198 GMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDP-L--EARVV 274 (440)
Q Consensus 198 ~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~-~--~~~t~ 274 (440)
+++.+ +++.|.+ +. ..++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++.. ++ . ..+++
T Consensus 158 ~~i~~--d~~~p~~-i~----~~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~~~~~~~~ 227 (364)
T 2rb7_A 158 YVVAL--DGGNPQQ-VI----TKEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENEDHWHRTV 227 (364)
T ss_dssp EEEEC--SSSBTTE-EE----EEECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCTTCCSCEE
T ss_pred EEEEc--cCCcccc-eE----EEeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhhcCCCceE
Confidence 66654 3456666 32 234799999999999999999999999999999999999988732 22 2 36899
Q ss_pred EEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHH
Q 013571 275 TVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGK 354 (440)
Q Consensus 275 ~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (440)
+++.|+||.+.|+||++|++++|+|+.|.++.+++.++++++++. ++++.. ..++ ..+.++++++.++
T Consensus 228 ~vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-------~v~~~~----~~~~-~~~~~~~l~~~~~ 295 (364)
T 2rb7_A 228 NLGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-------TVSIVR----TVPV-FLAADSPYTERLL 295 (364)
T ss_dssp EEEEEEECSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-------EEEEEE----EECC-EECCCCHHHHHHH
T ss_pred EEEEEecCCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-------hEEecc----CCcc-ccCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999998753 444211 2232 3445678999999
Q ss_pred HHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 355 RVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 355 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
++++ .+|. ...|++|+++|.+. +|++. +||+... . .|++||+++++++.+++++|+.++.+++.
T Consensus 296 ~~~~-~~g~-------~~~g~~D~~~~~~~~~p~v~--~Gp~~~~----~-~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 360 (364)
T 2rb7_A 296 ALSG-ATAG-------KAHGASDARYLGENGLTGVV--WGAEGFN----T-LHSRDECLHIPSLQSIYDPLMQLAREMEE 360 (364)
T ss_dssp HHHC-CEEE-------EESSCCGGGGTGGGTCCEEE--CCCCCTT----C-TTSTTCEEETTHHHHHHHHHHHHHHHHHC
T ss_pred HHHH-hcCC-------CCCCCchHHHHHhcCCCEEE--ECCCCcc----c-cCCCCccccHHHHHHHHHHHHHHHHHHHh
Confidence 9987 4453 25688999999984 89765 7775430 2 59999999999999999999999999986
Q ss_pred c
Q 013571 434 N 434 (440)
Q Consensus 434 ~ 434 (440)
+
T Consensus 361 ~ 361 (364)
T 2rb7_A 361 H 361 (364)
T ss_dssp -
T ss_pred h
Confidence 4
No 19
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=5.2e-47 Score=380.83 Aligned_cols=351 Identities=14% Similarity=0.077 Sum_probs=278.2
Q ss_pred HHHHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCc-eeecCCCceEEEEEcCC---CCCEEEEEEecc
Q 013571 55 EWMRRIRRRIHENPELGF----------EEYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSG---GEPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nv~~~~~~~---~~~~i~~~~H~D 120 (440)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ...|++++++++ ++|+|+|+||+|
T Consensus 27 ~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d-~~~nv~a~~~g~~~~~~~~v~l~~H~D 105 (434)
T 3ife_A 27 EELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD-DNGYVMATLPANTDKDVPVIGFLAHLD 105 (434)
T ss_dssp HHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTSCEEEEECCBSSSCCCCEEEEEECC
T ss_pred HHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC-CCcEEEEEeCCCCCCCCCeEEEEEEcc
Confidence 789999999999999998 5689999999999999997 7764 467899999764 258999999999
Q ss_pred cCCCCC-CCCCcccc-cC----------------------------CCcccccch-------hHHHHHHHHHHHHHHhcc
Q 013571 121 ALPLQE-MVEWEHKS-KN----------------------------NGKMHGCGH-------DVHTTILLGAARLLKHRM 163 (440)
Q Consensus 121 ~vp~~~-~~~~~~~~-~~----------------------------~g~i~GrG~-------k~~~a~~l~a~~~l~~~~ 163 (440)
|||..+ |...||.. .. +|+|||||. |++++++|+|+++|++.+
T Consensus 106 tVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~ 185 (434)
T 3ife_A 106 TATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNP 185 (434)
T ss_dssp BCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCT
T ss_pred cCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHhCC
Confidence 999643 22223321 11 258999884 899999999999999988
Q ss_pred cCCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCC
Q 013571 164 DRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQ 242 (440)
Q Consensus 164 ~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~ 242 (440)
..++++|.|+|++|||++.|++.+.... + ++|+++++|+. +.|.+.. .++|..+++|+++|+++||+ .|+
T Consensus 186 ~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~~---~~g~i~~----~~~G~~~~~i~v~G~~~Hag~~P~ 256 (434)
T 3ife_A 186 QIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDGG---PLGGLEY----ESFNAAGAKLTFNGTNTHPGTAKN 256 (434)
T ss_dssp TSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCCC---STTEEEC----CBCEEEEEEEEEECBCCCGGGCTT
T ss_pred CCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecCC---CCCceee----cCCCeEEEEEEEEEEecCCCCCcc
Confidence 7889999999999999778887764332 3 58999998843 3454432 34799999999999999987 899
Q ss_pred CCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHH
Q 013571 243 DTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAA 322 (440)
Q Consensus 243 ~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~ 322 (440)
.|+|||..+++++.+|++...+. .++.+++.+++| ..|+||++|++++++|+.|.++.+++.++|++++++.+.
T Consensus 257 ~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~~g~i~~g-~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~ 330 (434)
T 3ife_A 257 KMRNATKLAMEFNGHLPVEEAPE-----YTEGYEGFYHLL-SLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQMQE 330 (434)
T ss_dssp TCBCHHHHHHHHHHTSCTTCSGG-----GCCTTCCEEEEE-EEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcccccCCC-----cceeeeEEEEee-eEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998752111 112223334444 378999999999999999999999999999999999888
Q ss_pred HcC-CeEEEEEeccccCCC-CCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCC
Q 013571 323 VHQ-CSATIDFLEEKMRHY-PATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETL 399 (440)
Q Consensus 323 ~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~ 399 (440)
.++ .++++++... ..++ ++++.++++++.+++++++ +|.++. ...+.|++|+++|.+. +|+++ +|++..
T Consensus 331 ~~g~~~~~v~~~~~-~~~~~~~~~~d~~l~~~~~~a~~~-~G~~~~--~~~~~ggtD~~~~~~~GiP~~~--~g~g~~-- 402 (434)
T 3ife_A 331 KYGQDAVVLEMNDQ-YYNMLEKIEPVREIVDIAYEAMKS-LNIEPN--IHPIRGGTDGSQLSYMGLPTPN--IFTGGE-- 402 (434)
T ss_dssp HHCGGGEEEEEEEE-ECCTHHHHGGGTHHHHHHHHHHHH-TTCCCE--ECCBSSCCHHHHHHHTTCCCCE--ECCSEE--
T ss_pred hcCCceEEEEEeec-ccchhccccCCHHHHHHHHHHHHH-hCCCCE--EeecccCchHHHHhhCCCcEEE--eCCCCC--
Confidence 888 5566555211 1111 1356789999999999998 487653 3467899999999998 99876 555432
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 400 KPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 400 g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
.+|++||+++++++.+++++|+.++.++.+
T Consensus 403 ----~~H~~~E~i~~~~l~~~~~~~~~~l~~la~ 432 (434)
T 3ife_A 403 ----NYHGKFEYVSVDVMEKAVQVIIEIARRFEE 432 (434)
T ss_dssp ----STTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCcCCceeecHHHHHHHHHHHHHHHHHHhh
Confidence 499999999999999999999999999865
No 20
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=3.3e-47 Score=387.43 Aligned_cols=364 Identities=10% Similarity=0.024 Sum_probs=249.8
Q ss_pred HHHHHhcCCcchHHHHHHHHHHHHhCCCCCcch------------HHHHHHHHHHHHhCCCceeecCCCceEEEEEc-CC
Q 013571 42 RELLDSAREPEFFEWMRRIRRRIHENPELGFEE------------YETSQLVRSELDSLGIEYTWPVAKTGIVASVG-SG 108 (440)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~-~~ 108 (440)
.++.++++.++ +++++++++|++|||+|++| .++++|+.++|+++||+++..+ |+++.+. +.
T Consensus 23 ~~i~~~i~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~~~~~g~ 97 (492)
T 3khx_A 23 SMWKEKVQQYE--DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIEAGK 97 (492)
T ss_dssp CTTHHHHHTTH--HHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET---TTEEEEEEEC
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC---CEEEEEEeCC
Confidence 44667777777 99999999999999999876 4899999999999999987643 3454443 33
Q ss_pred CCCEEEEEEecccCCCCC-CCCCcccc-cCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-cc
Q 013571 109 GEPWFGLRAEMDALPLQE-MVEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YG 182 (440)
Q Consensus 109 ~~~~i~~~~H~D~vp~~~-~~~~~~~~-~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~ 182 (440)
++|+|+|+|||||||+++ |...||.. +++|++|||| ||++++++|+|+++|++.+.+++++|.|+|++|||. +.
T Consensus 98 ~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 177 (492)
T 3khx_A 98 GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWK 177 (492)
T ss_dssp SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTCCCC
T ss_pred CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCc
Confidence 458999999999999876 44557874 6789999999 589999999999999998888899999999999995 47
Q ss_pred chHHHHHcCCCCCCCEEEEeccCC-----------------------------------C-----CCCCc--ccccC---
Q 013571 183 GAYYMIKEGAVDKFQGMFGIHISP-----------------------------------V-----LPTGT--VGSRP--- 217 (440)
Q Consensus 183 G~~~l~~~~~~~~~d~~~~~~~~~-----------------------------------~-----~~~g~--~~~~~--- 217 (440)
|++.++++.. .+|+.+..+.+. + .|... +...+
T Consensus 178 g~~~~~~~~~--~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~ept~~ 255 (492)
T 3khx_A 178 CTDRYFKTEE--MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENM 255 (492)
T ss_dssp TTSHHHHHSC--CCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEECSCH
T ss_pred CHHHHHHhCc--CCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeecccch
Confidence 9999988643 234433222100 0 00000 00000
Q ss_pred ------------CCccccee-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH------Hhh-------cc---
Q 013571 218 ------------GPLLAGSG-----RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQ------HIV-------SR--- 264 (440)
Q Consensus 218 ------------g~~~~g~~-----~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~------~~~-------~~--- 264 (440)
...++|.. +++|+++|+++|+|+|+.|+|||..+++++.+|+ ++. ..
T Consensus 256 ~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 335 (492)
T 3khx_A 256 TDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDF 335 (492)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCTT
T ss_pred HHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCCC
Confidence 12237888 9999999999999999999999999999999886 221 00
Q ss_pred -------cCC-CCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccc
Q 013571 265 -------ETD-PLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEK 336 (440)
Q Consensus 265 -------~~~-~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~ 336 (440)
..+ ..+.+++|++.|++|. |++|++++|+|+.+.++.+++.++++++++ .+++++++..
T Consensus 336 ~~~l~i~~~d~~~G~~t~n~g~i~~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~----~~g~~~~i~~---- 402 (492)
T 3khx_A 336 GEKMGMKFHTDVMGDVTTNIGVITYDN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ----QYGFEVKLGK---- 402 (492)
T ss_dssp SGGGTCC-------CCEEEEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG----GGTEEEEEEE----
T ss_pred ccccCCccccCCcCccEEeeeEEEEec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH----HcCCEEEEec----
Confidence 011 2457899999999886 999999999999999999999999998875 3577777654
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCc
Q 013571 337 MRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDA 416 (440)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~ 416 (440)
..+...++.++++++.+++++++++|.++. +..+.|+||++++.+.+|....| |+ +...+|++||++++++
T Consensus 403 ~~~p~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~gggtDa~~~~~~v~~G~~f--Pg-----~~~~~H~~dE~v~i~~ 473 (492)
T 3khx_A 403 VQPPHYVDKNDPFVQKLVTAYRNQTNDMTE--PYTIGGGTYARNLDKGVAFGAMF--SD-----SEDLMHQKNEYITKKQ 473 (492)
T ss_dssp EECCBCCGGGCHHHHHHHHHHHTTCC--------------------------------------------CCSCEEEHHH
T ss_pred cCCceecCCCcHHHHHHHHHHHHHhCCCCe--EEeeehhHHHHHhhCceEECCcC--CC-----CCCCCCCCccCcCHHH
Confidence 222223456789999999999998887653 45788999999998645422211 32 2345999999999999
Q ss_pred hHHHHHHHHHHHHHHhcc
Q 013571 417 LPIGAALHAAVAISYLDN 434 (440)
Q Consensus 417 l~~~~~~~~~~~~~~~~~ 434 (440)
+.+++++|+.++.++++.
T Consensus 474 l~~~~~i~~~~l~~l~~~ 491 (492)
T 3khx_A 474 LFNATSIYLEAIYSLCVE 491 (492)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999999753
No 21
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=3.8e-46 Score=373.69 Aligned_cols=344 Identities=16% Similarity=0.142 Sum_probs=283.7
Q ss_pred HHHHHHHHHHHhCCCCC----------cchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-C-CCEEEEEEecccC
Q 013571 55 EWMRRIRRRIHENPELG----------FEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-G-EPWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~-~~~i~~~~H~D~v 122 (440)
+++++++++|++|||++ ++|.++++||.++|+++|++++.+..+ |++++++++ + +|+|+|.||||||
T Consensus 9 ~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~~g-nv~a~~~g~~~~~~~i~l~~H~D~V 87 (423)
T 1z2l_A 9 QAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVG-NLYGRLNGTEYPQEVVLSGSHIDTV 87 (423)
T ss_dssp HHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECTTS-CEEEEECCSSEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEecCC-cEEEEEcCCCCCCCEEEEEEecCCC
Confidence 78899999999999988 678999999999999999998765433 899999754 3 3899999999999
Q ss_pred CCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHHH----c--
Q 013571 123 PLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIK----E-- 190 (440)
Q Consensus 123 p~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~~----~-- 190 (440)
|.+. . .++|++++++|+++++|++.+.+++++|.|+|++|||++ .|++.+.. +
T Consensus 88 p~~g------------~---~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 152 (423)
T 1z2l_A 88 VNGG------------N---LDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDV 152 (423)
T ss_dssp TTBC------------S---STTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGT
T ss_pred CCCC------------c---cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHH
Confidence 9642 1 245789999999999999988789999999999999964 28888865 2
Q ss_pred ------------------CCC---------CCCCEEEEeccCCC-------CCCCcccccCCCcccceeEEEEEEEecCC
Q 013571 191 ------------------GAV---------DKFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVIKGKGG 236 (440)
Q Consensus 191 ------------------~~~---------~~~d~~~~~~~~~~-------~~~g~~~~~~g~~~~g~~~~~i~v~G~~~ 236 (440)
|.. +++|+++.+|..++ .+.+.+ ..++|..+++|+++|+++
T Consensus 153 ~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~-----~~~~g~~~~~i~v~G~~~ 227 (423)
T 1z2l_A 153 RNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVV-----NAIVGQRRYTVTLNGESN 227 (423)
T ss_dssp SSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEE-----EEECEEEEEEEEEECCCE
T ss_pred hhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEE-----eeEecceEEEEEEEeEcC
Confidence 111 13567777776543 122222 135789999999999999
Q ss_pred CCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHHHHHHH
Q 013571 237 HAA-MPQ-DTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRI 313 (440)
Q Consensus 237 Hss-~p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i 313 (440)
|+| .|+ .|.||+..+++++.+|+++..+. ++ .++++++.|+|| .+.|+||++|++.+|+|+.|.++.+++.+++
T Consensus 228 Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~-~~--~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i 304 (423)
T 1z2l_A 228 HAGTTPMGYRRDTVYAFSRICHQSVEKAKRM-GD--PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQL 304 (423)
T ss_dssp ETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH-CT--TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHHhc-CC--CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHH
Confidence 999 795 89999999999999998875432 22 568999999997 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEc
Q 013571 314 KEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVG 393 (440)
Q Consensus 314 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G 393 (440)
+++++..+..++++++++. ...+|++..++++++.++++++++ |.++. +....|++|+++|.+.+|+++.+.|
T Consensus 305 ~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~~p~~~~~~p 377 (423)
T 1z2l_A 305 ENDMRAICDEMDIGIDIDL----WMDEEPVPMNKELVATLTELCERE-KLNYR--VMHSGAGHDAQIFAPRVPTCMIFIP 377 (423)
T ss_dssp HHHHHHHHHHHTCEEEEEE----EEEECCEECCHHHHHHHHHHHHHT-TCCEE--EEEESSCCTHHHHTTTSCEEEEEEC
T ss_pred HHHHHHHHHHhCCeEEEEE----ecCCCCccCCHHHHHHHHHHHHHc-CCCeE--EecCCCcccHHHHHhhCCEEEEEeC
Confidence 9999998888899988876 456677778899999999999998 87543 3467899999999888998765444
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhccc
Q 013571 394 TRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNL 435 (440)
Q Consensus 394 ~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~ 435 (440)
... ..+|++||+++++++.+++++|+.++.+++.+.
T Consensus 378 ~~~------~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 413 (423)
T 1z2l_A 378 SIN------GISHNPAERTNITDLAEGVKTLALMLYQLAWQK 413 (423)
T ss_dssp CGG------GCCSSTTCCCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCC------CCCCCccccCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 322 248999999999999999999999999998763
No 22
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=2e-45 Score=366.62 Aligned_cols=341 Identities=21% Similarity=0.196 Sum_probs=286.3
Q ss_pred HHHHHHHHHHHhCCCC----------CcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-C-CCEEEEEEecccC
Q 013571 55 EWMRRIRRRIHENPEL----------GFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-G-EPWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~-~~~i~~~~H~D~v 122 (440)
+++++++++|++||++ |++|.++++||.++|+++|++++.+..+ |++++++++ + +|+|+|.+|||+|
T Consensus 5 ~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~~g-nv~a~~~g~~~~~~~i~l~aH~D~v 83 (408)
T 3n5f_A 5 ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAG-NLIGRKEGTNPDATVVLVGSHLDSV 83 (408)
T ss_dssp HHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECTTC-CEEEEECCSSTTSCEEEEEEESCCC
T ss_pred HHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcCCC-CEEEEecCCCCCCCEEEEEecCCCC
Confidence 7889999999999983 7889999999999999999998875444 899999765 3 6999999999999
Q ss_pred CCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHHH-------
Q 013571 123 PLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIK------- 189 (440)
Q Consensus 123 p~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~~------- 189 (440)
|.+ |. .++|++++++|++++.|++.+.+++++|.|+|+++||++ .|++.++.
T Consensus 84 ~~~------------g~---~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 148 (408)
T 3n5f_A 84 YNG------------GC---FDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEAL 148 (408)
T ss_dssp TTB------------CS---STTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGG
T ss_pred CCC------------Cc---cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHh
Confidence 953 21 145789999999999999988789999999999999953 38888872
Q ss_pred ----------------cCC----C-----C--CCCEEEEeccCCC-------CCCCcccccCCCcccceeEEEEEEEecC
Q 013571 190 ----------------EGA----V-----D--KFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVIKGKG 235 (440)
Q Consensus 190 ----------------~~~----~-----~--~~d~~~~~~~~~~-------~~~g~~~~~~g~~~~g~~~~~i~v~G~~ 235 (440)
.|+ + + ++|+++.+|.+++ .+.+.+. .++|..+++|+++|++
T Consensus 149 ~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~-----~~~g~~~~~i~v~G~~ 223 (408)
T 3n5f_A 149 ECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVT-----GIAGLIWVKFTIEGKA 223 (408)
T ss_dssp SCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEE-----EECEEEEEEEEEECCC
T ss_pred hccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEE-----EeccceEEEEEEEEEc
Confidence 221 1 2 5678888886553 2233322 3579999999999999
Q ss_pred CCC-CCC-CCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHHHHHH
Q 013571 236 GHA-AMP-QDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQR 312 (440)
Q Consensus 236 ~Hs-s~p-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~ 312 (440)
+|+ +.| +.|.||+..+++++.+|+++. +..+ ..+++++.|+|| .+.|+||++|++.+++|..|.++.+++.++
T Consensus 224 ~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~---~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~ 299 (408)
T 3n5f_A 224 EHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG---TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKA 299 (408)
T ss_dssp EETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS---SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHH
T ss_pred CcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC---CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHH
Confidence 999 689 589999999999999998875 2222 679999999997 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEE
Q 013571 313 IKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYV 392 (440)
Q Consensus 313 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~ 392 (440)
++++++..+..+++++++++ ...+|++..++++++.++++++++ |.+.. .....|++|+++|.+.+|+++++.
T Consensus 300 i~~~~~~~a~~~g~~~~i~~----~~~~p~~~~d~~l~~~~~~a~~~~-g~~~~--~~~~~ggtD~~~~~~~iP~~~~~~ 372 (408)
T 3n5f_A 300 IAVRAETIAKERNVRVTTER----LQEMPPVLCSDEVKRAAEAACQKL-GYPSF--WLPSGAAHDSVQLAPICPIGMIFV 372 (408)
T ss_dssp HHHHHHHHHHHHTCEEEEEE----EEEECCEECCHHHHHHHHHHHHHH-TCCCC--EEEESSCCTTTTTTTTSCEEEEEE
T ss_pred HHHHHHHHHHHhCCeEEEEE----ecCCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCCcCchHHHHHHHHCCEEEEEe
Confidence 99999998888999999887 566777888999999999999998 87543 245678999999988899887777
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 393 GTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 393 G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
|.... .+|++||+++++++..++++|+.++.++..
T Consensus 373 ~~~~~------~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 407 (408)
T 3n5f_A 373 RSQDG------VSHSPAEWSTKEDCAAGAEVLYHTVWQLAQ 407 (408)
T ss_dssp CCGGG------CCSSTTCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCC------CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 75432 389999999999999999999999998853
No 23
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=6.9e-46 Score=371.10 Aligned_cols=350 Identities=12% Similarity=0.064 Sum_probs=282.3
Q ss_pred HHHHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhCCCc-eeecCCCceEEEEEcCC---CCCEEEEEEecc
Q 013571 55 EWMRRIRRRIHENPELGF----------EEYETSQLVRSELDSLGIE-YTWPVAKTGIVASVGSG---GEPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nv~~~~~~~---~~~~i~~~~H~D 120 (440)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ...|++++++++ ++|+|+|.||||
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~g~~~~~~~~i~l~aH~D 80 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS-EKGTLMATLPANVEGDIPAIGFISHVD 80 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTCCEEEEECCSSCSCCCCEEEEEECC
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC-CCceEEEEECCCCCCCCCceEEEEecc
Confidence 357888999999999998 6889999999999999998 6654 457899999754 358999999999
Q ss_pred cCCCCCC-CCCcc-----ccc-----------------------CCCcccccc-----h--hHHHHHHHHHHHHHHhccc
Q 013571 121 ALPLQEM-VEWEH-----KSK-----------------------NNGKMHGCG-----H--DVHTTILLGAARLLKHRMD 164 (440)
Q Consensus 121 ~vp~~~~-~~~~~-----~~~-----------------------~~g~i~GrG-----~--k~~~a~~l~a~~~l~~~~~ 164 (440)
|||..+. ...|| ... .+|++|||| . |++++++|++++.|++.+
T Consensus 81 ~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~- 159 (417)
T 1fno_A 81 TSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP- 159 (417)
T ss_dssp BCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-
T ss_pred ccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC-
Confidence 9998653 22243 221 256899999 4 589999999999999887
Q ss_pred CCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCC-CCCC
Q 013571 165 RLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQD 243 (440)
Q Consensus 165 ~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~ 243 (440)
.++++|.|+|++|||.+.|++.+.+++. .+|+++.+++. +.|.+. ..++|..+++|+++|+++|++ .|+.
T Consensus 160 ~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~~---~~g~i~----~~~~g~~~~~i~~~G~~~Hs~~~p~~ 230 (417)
T 1fno_A 160 IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDGG---GVGELE----FENFNAASVNIKIVGNNVHPGTAKGV 230 (417)
T ss_dssp CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCCC---STTBEE----CCBCEEEEEEEEEECBCCCGGGCTTT
T ss_pred CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCCC---CcCeeE----EecCCceeEEEEEEeeccCCCCCccc
Confidence 7889999999999996688877764433 57888877643 345432 235799999999999999999 7999
Q ss_pred CCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHH
Q 013571 244 TRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAV 323 (440)
Q Consensus 244 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~ 323 (440)
|.|||..+++++.+|+++..+........+++++.|+|| |++|++++|+|+.|.++.+++.++|+++++..+..
T Consensus 231 g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG------p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~ 304 (417)
T 1fno_A 231 MVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT------VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKG 304 (417)
T ss_dssp CBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec------cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999876433323334568999999988 99999999999999999999999999999988776
Q ss_pred cCCe--EEEEEeccccCCCC----CcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCC
Q 013571 324 HQCS--ATIDFLEEKMRHYP----ATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRN 396 (440)
Q Consensus 324 ~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~ 396 (440)
++.. +++++. ..++ .++.++++++.+.+++++. |.++. .....|+||+++|... +|++. +||+.
T Consensus 305 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~ggtD~~~~~~~gip~v~--~G~~~ 375 (417)
T 1fno_A 305 LHPDCYIELVIE----DSYYNMREKVVEHPHILDIAQQAMRDC-HITPE--MKPIRGGTDGAQLSFMGLPCPN--LFTGG 375 (417)
T ss_dssp CCTTCCEEEEEE----EEECCCHHHHHTSTHHHHHHHHHHHHT-TCCCB--CCCBSSCCHHHHHTTTTCCCCE--ECCSE
T ss_pred cCCCceEEEEEe----ccccchhccccCCCHHHHHHHHHHHHc-CCCce--eccceeccchHhHHhcCCCEEE--EcCCC
Confidence 6643 666552 2232 2467899999999999994 87653 3577899999999887 89875 67654
Q ss_pred CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcccc
Q 013571 397 ETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLE 436 (440)
Q Consensus 397 ~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~~ 436 (440)
. .+|++||+++++++.+++++|+.++.+++..+.
T Consensus 376 ~------~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~~~ 409 (417)
T 1fno_A 376 Y------NYHGKHEFVTLEGMEKAVQVIVRIAELTAKRGQ 409 (417)
T ss_dssp E------STTSTTCEEEHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred C------CCCCcccccCHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3 389999999999999999999999999987543
No 24
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=9.6e-46 Score=375.30 Aligned_cols=346 Identities=17% Similarity=0.127 Sum_probs=281.5
Q ss_pred HHHHHHHHHH-HhCCCC-----------------CcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-CCCEEEE
Q 013571 55 EWMRRIRRRI-HENPEL-----------------GFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGL 115 (440)
Q Consensus 55 ~~~~~~~~~l-~~~ps~-----------------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~~~~i~~ 115 (440)
+++++++++| ++|||+ +++|.++++||.++|+++|++++.+. ..|++++++|+ ++|+|+|
T Consensus 32 ~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d~-~gnvia~~~g~~~~~~i~l 110 (474)
T 2v8h_A 32 GRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDK-IGNMFAVYPGKNGGKPTAT 110 (474)
T ss_dssp THHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEBT-TCCEEEEECCSSCCSCEEE
T ss_pred HHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEec-CceEEEEECCCCCCCeEEE
Confidence 7899999999 999987 36789999999999999999987643 34799999754 4579999
Q ss_pred EEecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc------cchHHHHH
Q 013571 116 RAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIK 189 (440)
Q Consensus 116 ~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~------~G~~~l~~ 189 (440)
.|||||||.++ | | ++|++++++|+++++|++.+.+++++|.|+|++|||++ .|++.+.+
T Consensus 111 ~~H~DtVp~~g---~----------~--D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 111 GSHLDTQPEAG---K----------Y--DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECCCCCSSBC---S----------S--TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEecccCCCCC---C----------c--CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 99999999753 2 2 57899999999999999988888999999999999963 27887753
Q ss_pred ---------------------------cCCC---------CCCCEEEEeccCCCCCCCcccccCC--CcccceeEEEEEE
Q 013571 190 ---------------------------EGAV---------DKFQGMFGIHISPVLPTGTVGSRPG--PLLAGSGRFTAVI 231 (440)
Q Consensus 190 ---------------------------~~~~---------~~~d~~~~~~~~~~~~~g~~~~~~g--~~~~g~~~~~i~v 231 (440)
.|+. .++++.+.+|..++...+......+ ..++|..+++|++
T Consensus 176 ~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v 255 (474)
T 2v8h_A 176 DLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTV 255 (474)
T ss_dssp SSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEE
T ss_pred ccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEE
Confidence 1221 2567778887654321110001111 2347999999999
Q ss_pred EecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecC-CcccccccceEEEEEEecCChhhHHH
Q 013571 232 KGKGGHAA-MPQ-DTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLY 308 (440)
Q Consensus 232 ~G~~~Hss-~p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG-~~~n~iP~~a~~~~~~R~~~~~~~~~ 308 (440)
+|+++|+| .|+ .|.|||..+++++.+|+++..+. .++++++.|+|| .+.|+||++|++++++|+.|.++.++
T Consensus 256 ~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~ 330 (474)
T 2v8h_A 256 HGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLAT 330 (474)
T ss_dssp ECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHHHH
T ss_pred EeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHHHH
Confidence 99999999 597 89999999999999998875442 579999999998 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---cCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcC-C-CCcccCCCCcccccHHHHHH
Q 013571 309 LEQRIKEVIEMQAAV---HQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVG-E-PNVHLTPVEMGAEDFSFYTQ 383 (440)
Q Consensus 309 v~~~i~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~~~~~~~~~g~tD~~~~~~ 383 (440)
+.+++++++++.+.. ++++++++. ...+|++..++++++.++++++++ | . ++. +....|++|+++|.+
T Consensus 331 i~~~i~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~d~~l~~~~~~a~~~~-G~~~~~~--~~~~~ggtD~~~~~~ 403 (474)
T 2v8h_A 331 MLKEAAAEFDRLIKINDGGALSYESET----LQVSPAVNFHEVCIECVSRSAFAQ-FKKDQVR--QIWSGAGHDSCQTAP 403 (474)
T ss_dssp HHHHHHHHHHHHTTCCTTCCCEEEEEE----EEEECCEECCHHHHHHHHHHHHHH-SCGGGEE--EEEESSCCTHHHHTT
T ss_pred HHHHHHHHHHHHHhhcccCCcEEEEEE----ecCCCCccCCHHHHHHHHHHHHHc-CCCCcce--ecCCcCCccHHHHHh
Confidence 999999999887665 788888776 455667778999999999999998 8 5 442 346789999999988
Q ss_pred HhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 384 RMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 384 ~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
.+|+++.+.|... ..+|++||+++++++.+++++|+.++.+++..
T Consensus 404 ~~P~~~~fgp~~~------~~~H~p~E~i~~~~l~~~~~~~~~~l~~l~~~ 448 (474)
T 2v8h_A 404 HVPTSMIFIPSKD------GLSHNYYEYSSPEEIENGFKVLLQAIINYDNY 448 (474)
T ss_dssp TSCEEEEEECCGG------GCCSSTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEEEeCCCC------CCCCCccccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 8998654444322 24899999999999999999999999999864
No 25
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=3.2e-44 Score=365.79 Aligned_cols=349 Identities=13% Similarity=0.102 Sum_probs=275.8
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC----CCCEEEEEEecccCCCCCC---
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG----GEPWFGLRAEMDALPLQEM--- 127 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~----~~~~i~~~~H~D~vp~~~~--- 127 (440)
+++++++++|+++|++|++|.++++||.++|+++|++++.+. ..|++++++++ ++|+|+|.|||||||.++.
T Consensus 11 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~ 89 (487)
T 2qyv_A 11 KLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE-VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTN 89 (487)
T ss_dssp HHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTBCCEEEEEESCBCCC------
T ss_pred HHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCc
Confidence 789999999999999999999999999999999999987654 45899999752 3589999999999998643
Q ss_pred ---CCCcccc-cCCCcccccch------hHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCC
Q 013571 128 ---VEWEHKS-KNNGKMHGCGH------DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKF 196 (440)
Q Consensus 128 ---~~~~~~~-~~~g~i~GrG~------k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~ 196 (440)
...||.. .++|++||||+ |++++++|++++. .+ .++++|.|+|+++||. +.|++.+++++ + .+
T Consensus 90 ~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~~ 163 (487)
T 2qyv_A 90 HNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES---ND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L-RS 163 (487)
T ss_dssp ----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC---SS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C-CC
T ss_pred cccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh---CC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c-CC
Confidence 3446764 46899999985 3788888888863 33 3789999999999995 46999888765 3 47
Q ss_pred CEEEEeccCCCCCCCcccc--cCC------------CcccceeEEEEEEEe-cCCCCCCC-CCC-CCHHHHHHHHHHHHH
Q 013571 197 QGMFGIHISPVLPTGTVGS--RPG------------PLLAGSGRFTAVIKG-KGGHAAMP-QDT-RDPVLAASFAILTLQ 259 (440)
Q Consensus 197 d~~~~~~~~~~~~~g~~~~--~~g------------~~~~g~~~~~i~v~G-~~~Hss~p-~~g-~nAi~~~~~~i~~l~ 259 (440)
|+++..++++ .+.+.. +.+ ..++| .+++|+++| +++||+.| +.+ .||+..+++++.+|+
T Consensus 164 d~~~~~d~~~---~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~ 239 (487)
T 2qyv_A 164 EILINTDTEE---NGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQ 239 (487)
T ss_dssp SEEEECCCCC---TTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHH
T ss_pred CEEEEEccCC---CCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHh
Confidence 8888766532 233321 111 13456 789999999 89999987 666 799999999999998
Q ss_pred HhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEE----------------------------------------e
Q 013571 260 HIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTF----------------------------------------R 299 (440)
Q Consensus 260 ~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~----------------------------------------R 299 (440)
.+. ...+++++.|+||.+.|+||++|++.+++ |
T Consensus 240 ~~~-------~~~~~~v~~i~gG~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 312 (487)
T 2qyv_A 240 QNQ-------PHFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQ 312 (487)
T ss_dssp HHC-------TTCCEEEEEEEEESCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSE
T ss_pred hcc-------CCCcEEEEEEeCCCcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccccc
Confidence 862 13578999999999999999999999999 8
Q ss_pred cCChhhHHHHHHHHHHH---------------------------------------------------HHHHHHHcCCeE
Q 013571 300 SLTTEGLLYLEQRIKEV---------------------------------------------------IEMQAAVHQCSA 328 (440)
Q Consensus 300 ~~~~~~~~~v~~~i~~~---------------------------------------------------i~~~~~~~~~~~ 328 (440)
+.|.++.+.+.+.++++ ++..+..+++++
T Consensus 313 ~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~ 392 (487)
T 2qyv_A 313 VFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNI 392 (487)
T ss_dssp EECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccCHHHHHHHHHHHHhCCCcceeeccccCCceEeccceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceE
Confidence 88999988888887765 344566678887
Q ss_pred EEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccc-eEEEccCCCCCCCCCCCCC
Q 013571 329 TIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAA-HFYVGTRNETLKPFIRLHS 407 (440)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v-~~~~G~~~~~~g~~~~~H~ 407 (440)
++... .+++ ..+.++++++.+.+++++++|.++. +....|++|+++|.+.+|.+ ++.+||.. ..+|+
T Consensus 393 ~~~~~---~p~~-~~~~d~~l~~~~~~~~~~~~G~~~~--~~~~~gg~D~~~~~~~~pg~~~v~~Gp~~------~~~H~ 460 (487)
T 2qyv_A 393 NLSGD---YPGW-EPQSHSDILDLTKTIYAQVLGTDPE--IKVIHAGLECGLLKKIYPTIDMVSIGPTI------RNAHS 460 (487)
T ss_dssp EEEEE---ECCB-CCCSCCHHHHHHHHHHHHHHSSCCE--EEEESSCCTHHHHHHHCTTSEEEECCCCE------ESTTS
T ss_pred EECCC---CCCC-CCCCCCHHHHHHHHHHHHHhCCCCe--EEEEeccccHHHHHhhCCCCCEEEECCCC------CCCCC
Confidence 76531 2222 2345889999999999998898653 34778999999999876654 45578743 24999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 408 PYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 408 ~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
+||+++++++.+++++|+.++.++++
T Consensus 461 ~~E~v~~~~l~~~~~~~~~~l~~l~~ 486 (487)
T 2qyv_A 461 PDEKVHIPAVETYWKVLTGILAHIPS 486 (487)
T ss_dssp TTCEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred CCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998864
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=7.4e-44 Score=362.33 Aligned_cols=344 Identities=14% Similarity=0.104 Sum_probs=266.3
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC----CCCEEEEEEecccCCCCCC---
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG----GEPWFGLRAEMDALPLQEM--- 127 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~----~~~~i~~~~H~D~vp~~~~--- 127 (440)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. ..|++++++++ ++|+|+|.|||||||.++.
T Consensus 14 ~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~-~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~ 92 (490)
T 3mru_A 14 APLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDP-TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTD 92 (490)
T ss_dssp HHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSC
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEcC-CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcc
Confidence 789999999999999999999999999999999999987654 45899999753 4589999999999998753
Q ss_pred ---CCCcccc-cCCCcccccch----h--HHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCC
Q 013571 128 ---VEWEHKS-KNNGKMHGCGH----D--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKF 196 (440)
Q Consensus 128 ---~~~~~~~-~~~g~i~GrG~----k--~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~ 196 (440)
...||.. .++|++||||+ | +++|++|+++ ++ ...++++|.|+|++|||.+ .|++.+++.. + +.
T Consensus 93 ~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~-~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~~ 166 (490)
T 3mru_A 93 HDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---AS-KEIKHGPIEVLLTIDEEAGMTGAFGLEAGW-L-KG 166 (490)
T ss_dssp CCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HC-SSCCCCSEEEEEESCSSSTTGGGGTCCSSS-C-CS
T ss_pred cccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---Hh-CCCCCCCEEEEEEcccccccHhHHHhhhcc-c-CC
Confidence 3346663 56899999995 3 6778877765 33 2357899999999999954 7998887643 3 46
Q ss_pred CEEEEeccCCCCCCCcccc--------------cCCCcccceeEEEEEEEe-cCCCCCC-CCCCC-CHHHHHHHHHHHHH
Q 013571 197 QGMFGIHISPVLPTGTVGS--------------RPGPLLAGSGRFTAVIKG-KGGHAAM-PQDTR-DPVLAASFAILTLQ 259 (440)
Q Consensus 197 d~~~~~~~~~~~~~g~~~~--------------~~g~~~~g~~~~~i~v~G-~~~Hss~-p~~g~-nAi~~~~~~i~~l~ 259 (440)
++++.+++. +.|.+.. .....++|..+++|+++| +++||+. |+.|. |||..+++++.+|+
T Consensus 167 ~~~~~~d~~---~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~ 243 (490)
T 3mru_A 167 DILLNTDSE---QEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHA 243 (490)
T ss_dssp SEEEECCCC---CTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHT
T ss_pred CEEEEcCCC---CCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHH
Confidence 888877643 2222210 002345799999999999 8999995 89999 99999999999997
Q ss_pred HhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHH------------------
Q 013571 260 HIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQA------------------ 321 (440)
Q Consensus 260 ~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~------------------ 321 (440)
+. .+++++.|+||.+.|+||++|++.+++|..+.+..++..+++.+.++...
T Consensus 244 ~~----------~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (490)
T 3mru_A 244 QE----------LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDA 313 (490)
T ss_dssp TT----------TTCEEEEEEECSCTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCC
T ss_pred hc----------CcEEEEEEECCCCCcccCCccEEEEEECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCcc
Confidence 52 35789999999999999999999998887665555555555544433222
Q ss_pred --------------------------------------------------------------------------HHcCCe
Q 013571 322 --------------------------------------------------------------------------AVHQCS 327 (440)
Q Consensus 322 --------------------------------------------------------------------------~~~~~~ 327 (440)
..+|.+
T Consensus 314 ~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~ 393 (490)
T 3mru_A 314 QVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQ 393 (490)
T ss_dssp CEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCE
T ss_pred ccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCe
Confidence 223444
Q ss_pred EEEEEeccccCCCCCc--CCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccc-eEEEccCCCCCCCCCC
Q 013571 328 ATIDFLEEKMRHYPAT--VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAA-HFYVGTRNETLKPFIR 404 (440)
Q Consensus 328 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v-~~~~G~~~~~~g~~~~ 404 (440)
+++.. .+|+. +.++++++.+.+++++++|.++. ...+.|++|+++|.+.+|.+ ...+||... .
T Consensus 394 ~~~~~------~~p~~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~ggg~d~~~~~~~~p~~~~v~fGp~~~------~ 459 (490)
T 3mru_A 394 IEFSG------AYPGWKPDADSEIMAIFRDMYEGIYGHKPN--IMVIHAGLECGLFKEPYPNMDMVSFGPTIK------F 459 (490)
T ss_dssp EEEEE------EECCBCCCTTCHHHHHHHHHHHTTSSSCCC--CEEESSCCHHHHTTSSCTTCEEEECCCCEE------S
T ss_pred EEecC------CCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEecHHHHHHHHhCCCCCEEEECCCCC------C
Confidence 44322 33333 56789999999999999998653 35888999999999877753 445787654 3
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 405 LHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 405 ~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
+|+|||+++++++.++.++|.+++.++.
T Consensus 460 ~H~p~E~v~i~~l~~~~~~l~~~l~~l~ 487 (490)
T 3mru_A 460 PHSPDEKVKIDTVQLFWDQMVALLEAIP 487 (490)
T ss_dssp TTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCccccHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998874
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.8e-43 Score=357.66 Aligned_cols=361 Identities=15% Similarity=0.128 Sum_probs=271.9
Q ss_pred HHHhcCCcchHHHHHHHHHHHHhCCCCCcch------------HHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCC
Q 013571 44 LLDSAREPEFFEWMRRIRRRIHENPELGFEE------------YETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEP 111 (440)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~ 111 (440)
+.++++.+. +++++++++|++|||+|++| .++++|+.++|+++|++++.. ++.++++.++ .++|
T Consensus 5 ~~~~~~~~~--~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g-~~~~ 80 (470)
T 1lfw_A 5 FKELAEAKK--DAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFG-AGDK 80 (470)
T ss_dssp HHHHHHTTH--HHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEEC-CCSS
T ss_pred HHHHHHHhH--HHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeC-CCCC
Confidence 344556666 89999999999999999876 689999999999999998753 4566888873 3358
Q ss_pred EEEEEEecccCCCCC-CCCCccccc--CCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cch
Q 013571 112 WFGLRAEMDALPLQE-MVEWEHKSK--NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGA 184 (440)
Q Consensus 112 ~i~~~~H~D~vp~~~-~~~~~~~~~--~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~ 184 (440)
+|+|.|||||||.++ |...||... ++|++|||| ||++++++|+++++|++.+.+++++|.|+|++|||++ .|+
T Consensus 81 ~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~G~ 160 (470)
T 1lfw_A 81 RLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGI 160 (470)
T ss_dssp EEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCHHH
T ss_pred eEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCccH
Confidence 999999999999876 555688864 699999999 4799999999999999988888999999999999954 689
Q ss_pred HHHHHcCCCCC----CCE----EEE--------eccCCCCC-CCcc-----------cccCCC-----------------
Q 013571 185 YYMIKEGAVDK----FQG----MFG--------IHISPVLP-TGTV-----------GSRPGP----------------- 219 (440)
Q Consensus 185 ~~l~~~~~~~~----~d~----~~~--------~~~~~~~~-~g~~-----------~~~~g~----------------- 219 (440)
+.+++++...+ +|. ++. ++..+ .+ .|.+ ...++.
T Consensus 161 ~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~-~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~ 239 (470)
T 1lfw_A 161 DYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKN-DDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAY 239 (470)
T ss_dssp HHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECC-CCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHH
T ss_pred HHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEcc-CCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHH
Confidence 99988754211 232 111 11000 00 0100 000000
Q ss_pred -------ccccee-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH------Hhh---ccc-------------
Q 013571 220 -------LLAGSG-----RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQ------HIV---SRE------------- 265 (440)
Q Consensus 220 -------~~~g~~-----~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~------~~~---~~~------------- 265 (440)
.++|.. +++|+++|+++|++.|+.|.||+..+++++.+|+ ++. .+.
T Consensus 240 ~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 319 (470)
T 1lfw_A 240 ESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGIF 319 (470)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTCC
T ss_pred HHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCCc
Confidence 124554 8999999999999999999999999999998875 221 110
Q ss_pred -CCC-CCCeEEEEEEEecCCcccccccc-eEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCC
Q 013571 266 -TDP-LEARVVTVGFIDAGQAGNIIPEI-VRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA 342 (440)
Q Consensus 266 -~~~-~~~~t~~~~~i~gG~~~n~iP~~-a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (440)
.++ .+.++++++.|++ +|++ |++++++|++|.++.+++.++++++++. +++ +++ ...+|+
T Consensus 320 ~~~~~~~~~t~~~g~i~~------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g~~--v~~----~~~~~~ 382 (470)
T 1lfw_A 320 HHDDLMGDLASSPSMFDY------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----ILD--VTY----NGFEEP 382 (470)
T ss_dssp CEETTTEECEEEEEEEEE------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----TEE--EEC----SCCBCC
T ss_pred ccccccccceEEEEEEEE------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----CeE--EEE----EeCCCc
Confidence 001 1346888888774 6999 9999999999999999999999999863 444 444 334444
Q ss_pred c--CCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHH
Q 013571 343 T--VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIG 420 (440)
Q Consensus 343 ~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~ 420 (440)
. +.++++++.+.+++++++|.++. +....|++|++++. |.+ .+||..+ |+...+|++||+++++++.++
T Consensus 383 ~~~~~d~~l~~~~~~a~~~~~g~~~~--~~~~~g~~d~~~~~---~~v--~~G~~~p--g~~~~~H~~~E~i~~~~l~~~ 453 (470)
T 1lfw_A 383 HYVPGSDPMVQTLLKVYEKQTGKPGH--EVVIGGGTYGRLFE---RGV--AFGAQPE--NGPMVMHAANEFMMLDDLILS 453 (470)
T ss_dssp EECCTTCHHHHHHHHHHHHHHCCCCC--EEEESSCCGGGGST---TCE--ECCEECT--TCCCCTTSTTCEEEHHHHHHH
T ss_pred eeeCCCCHHHHHHHHHHHHHcCCCCc--eeeecCHhHHHhCC---CeE--EECCCCC--CCCCCCCCCCcceEHHHHHHH
Confidence 4 45889999999999998897653 24667899999885 544 3565431 223469999999999999999
Q ss_pred HHHHHHHHHHHhccc
Q 013571 421 AALHAAVAISYLDNL 435 (440)
Q Consensus 421 ~~~~~~~~~~~~~~~ 435 (440)
+++|+.++.+++.+.
T Consensus 454 ~~~~~~~~~~l~~~~ 468 (470)
T 1lfw_A 454 IAIYAEAIYELTKDE 468 (470)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999998764
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=100.00 E-value=1.6e-32 Score=257.57 Aligned_cols=249 Identities=15% Similarity=0.157 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec--CCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCC--
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP--VAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW-- 130 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~-- 130 (440)
+++++++++|++|||+|++|.++++||.++|+++|++++.. .+++|+++++ +.++|+|+|.|||||||.++...|
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~~~~~i~l~~H~D~vp~~~~~~w~~ 84 (268)
T 3t68_A 6 SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARR-GTQSPLFVFAGHTDVVPAGPLSQWHT 84 (268)
T ss_dssp CHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEE-CSSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEe-CCCCCeEEEEccccccCCCCcccCCC
Confidence 67899999999999999999999999999999999988653 3567999998 444589999999999998765455
Q ss_pred -ccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCccc--chHHHHHcC--CCCCCCEEEE
Q 013571 131 -EHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYG--GAYYMIKEG--AVDKFQGMFG 201 (440)
Q Consensus 131 -~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~--G~~~l~~~~--~~~~~d~~~~ 201 (440)
||. .+++|++|||| ||++++++|++++.|++.+.+++++|.|+|++|||.+. |++.+++.. ....+|++++
T Consensus 85 ~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (268)
T 3t68_A 85 PPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIV 164 (268)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 676 46789999999 57999999999999998877788999999999999654 999888642 1236899999
Q ss_pred eccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEec
Q 013571 202 IHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDA 281 (440)
Q Consensus 202 ~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~g 281 (440)
.++......+. .+.+ |+.|.
T Consensus 165 ~ept~~~~~~~-------------~i~~---g~~G~-------------------------------------------- 184 (268)
T 3t68_A 165 GEPSSTLAVGD-------------VVKN---GRRGG-------------------------------------------- 184 (268)
T ss_dssp CSCCBSSSTTS-------------EEEE---CCGGG--------------------------------------------
T ss_pred eCCCCCccCCc-------------eeEE---ecCCC--------------------------------------------
Confidence 87543211110 1111 21111
Q ss_pred CCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhc
Q 013571 282 GQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMV 361 (440)
Q Consensus 282 G~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (440)
|...+++++++.+.+++++..
T Consensus 185 -----------------------------------------------------------p~~~~~~~l~~~l~~a~~~~~ 205 (268)
T 3t68_A 185 -----------------------------------------------------------GFLTDTGELLAAVVAAVEEVN 205 (268)
T ss_dssp -----------------------------------------------------------GTSCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------cccCCchHHHHHHHHHHHHHh
Confidence 111224569999999998855
Q ss_pred CCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 362 GEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 362 g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
|.++.. ..+.|+||++++.+. +|++. +++... ..|+++|+++++++..+++++.+++.+++.
T Consensus 206 gi~~~~--~~sgggtD~~~~~~~g~p~~~--~~~~~~------~~Hs~~E~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 206 HQAPAL--LTTGGTSDGRFIAQMGAQVVE--LGPVNA------TIHKVNECVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp SSCCEE--ESSCCCHHHHHHHHHTCEEEE--CCSBCT------TTTSTTCEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcEE--ecCccccHHHHHHhcCCCEEE--EeeCCC------CCCCccccccHHHHHHHHHHHHHHHHHHhC
Confidence 876643 356789999999987 56544 555443 279999999999999999999999999874
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.98 E-value=2.4e-31 Score=249.65 Aligned_cols=250 Identities=17% Similarity=0.225 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec--CCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCC-
Q 013571 54 FEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP--VAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEW- 130 (440)
Q Consensus 54 ~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~- 130 (440)
.+++++++++|++|||+|++|.++++||.++|+++||+++.. ..++|+++++ +.++|+|+|.|||||||.++...|
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~~~~~i~l~~H~D~vp~~~~~~w~ 83 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GTSEPVIAFAGHTDVVPTGDENQWS 83 (269)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CSSSCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEe-CCCCCEEEEEeeecccCCCCccccc
Confidence 378999999999999999999999999999999999998753 3568999998 444689999999999998764444
Q ss_pred --ccc-ccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCccc--chHHHHHcC--CCCCCCEEE
Q 013571 131 --EHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYG--GAYYMIKEG--AVDKFQGMF 200 (440)
Q Consensus 131 --~~~-~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~--G~~~l~~~~--~~~~~d~~~ 200 (440)
||. ..++|++|||| ||++++++|++++.|++.+.+++++|.|+|++|||++. |++.+++.. ...++|+++
T Consensus 84 ~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i 163 (269)
T 4h2k_A 84 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 163 (269)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEE
Confidence 676 45689999999 47999999999999998877788999999999999654 999887631 123679999
Q ss_pred EeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEe
Q 013571 201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFID 280 (440)
Q Consensus 201 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~ 280 (440)
+.++......+. . +. .|+- |.
T Consensus 164 ~~Ept~~~~~~~-------------~--i~-~g~~--------G~----------------------------------- 184 (269)
T 4h2k_A 164 VGEPSSAKNLGD-------------V--VK-NGRR--------GG----------------------------------- 184 (269)
T ss_dssp ECCCCBSSSTTS-------------E--EE-CSCT--------TC-----------------------------------
T ss_pred EECCCCCCcCCc-------------e--eE-Eecc--------cc-----------------------------------
Confidence 877543211111 0 11 1111 11
Q ss_pred cCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhh
Q 013571 281 AGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASM 360 (440)
Q Consensus 281 gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (440)
| . . ..++++++.+.+++++.
T Consensus 185 --------------------------------------------G------~----~------~~~~~l~~~l~~aa~~~ 204 (269)
T 4h2k_A 185 --------------------------------------------G------F----L------TKPGKLLDSITSAIEET 204 (269)
T ss_dssp --------------------------------------------C----------------------HHHHHHHHHHHHH
T ss_pred --------------------------------------------c------c----c------CCCcHHHHHHHHHHHHH
Confidence 0 1 0 11356889999888885
Q ss_pred cCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 361 VGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 361 ~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
.|.++.. ....|+||++++... +|++. +++.... +|+++|+++++++.+++++|..++.+++.
T Consensus 205 ~gi~~~~--~~~gggtDa~~~~~~g~p~~~--~~~~~~~------~Hs~~E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 205 IGITPKA--ETGGGTSDGRFIALMGAEVVE--FGPLNST------IHKVNECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp HSCCCEE--ECC--CHHHHHHHTTTCEEEE--CCSBCTT------TTSTTCEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred hCCCCEE--ecCCCCchHHHHHhhCCCEEE--EEeCCCC------CcCCcccccHHHHHHHHHHHHHHHHHHhh
Confidence 5876643 366789999999876 56554 4554433 89999999999999999999999999875
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.93 E-value=8.5e-26 Score=201.92 Aligned_cols=172 Identities=14% Similarity=0.066 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCceeec---CCCceEEEEEcCC-C-CCEEEEEEecccCCCCC-
Q 013571 55 EWMRRIRRRIHENPELGF--EEYETSQLVRSELDSLGIEYTWP---VAKTGIVASVGSG-G-EPWFGLRAEMDALPLQE- 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~--~e~~~~~~l~~~l~~~G~~~~~~---~~~~nv~~~~~~~-~-~~~i~~~~H~D~vp~~~- 126 (440)
+++++++++|++|||+|+ +|.++++|+.++|+++|++++.. .++.|++++++++ + +|+|+|.|||||||.++
T Consensus 10 ~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~ 89 (198)
T 1q7l_A 10 HPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFKE 89 (198)
T ss_dssp CHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCGG
T ss_pred HHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCcc
Confidence 678999999999999998 68899999999999999998764 3567999999764 2 48999999999999864
Q ss_pred -CCCCccccc--CCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc--cchHHHHHcCCCCCCCE
Q 013571 127 -MVEWEHKSK--NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAVDKFQG 198 (440)
Q Consensus 127 -~~~~~~~~~--~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~--~G~~~l~~~~~~~~~d~ 198 (440)
|...||... ++|++|||| ||++++++|+|+++|++.+.+++++|.|+|++|||.+ .|+..+++++.+..++.
T Consensus 90 ~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~ 169 (198)
T 1q7l_A 90 HWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRA 169 (198)
T ss_dssp GCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTCE
T ss_pred cCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccCCc
Confidence 444577743 589999999 5799999999999999988788999999999999964 69999987543222333
Q ss_pred EEEeccCCCCCCCcccccCCCcccceeEEE
Q 013571 199 MFGIHISPVLPTGTVGSRPGPLLAGSGRFT 228 (440)
Q Consensus 199 ~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~ 228 (440)
.++++.+..+|++...+. ..++|..|++
T Consensus 170 ~~~id~g~~ept~~~~v~--~~~kG~~~~~ 197 (198)
T 1q7l_A 170 GFALDEGIANPTDAFTVF--YSERSPWWVR 197 (198)
T ss_dssp EEEEECCCCCSSSSEEEE--ECCSSCGGGC
T ss_pred CEEEecCccCCCCCceEE--EEccEEEEEE
Confidence 344443345565532222 2346766654
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.93 E-value=1.5e-25 Score=217.29 Aligned_cols=248 Identities=13% Similarity=0.105 Sum_probs=166.0
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-CCCEEEEEEecccCC---------------
Q 013571 60 IRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGLRAEMDALP--------------- 123 (440)
Q Consensus 60 ~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~~~~i~~~~H~D~vp--------------- 123 (440)
++++|+++||+|++|.++++|+.++|+++|++++.+.. .|+++++++. ++|+++|.||+|+||
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~~-gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTDVL-GNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEECTT-SCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEeCC-CcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 48899999999999999999999999999999887543 4799998764 348999999999998
Q ss_pred -CCCCCCCcccc------------------------------------------------cC-C-------------Ccc
Q 013571 124 -LQEMVEWEHKS------------------------------------------------KN-N-------------GKM 140 (440)
Q Consensus 124 -~~~~~~~~~~~------------------------------------------------~~-~-------------g~i 140 (440)
.+.|...||.. ++ + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 34444334432 11 4 899
Q ss_pred cccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccC
Q 013571 141 HGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRP 217 (440)
Q Consensus 141 ~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~ 217 (440)
|||. ||++++++|++++.|+ +++++|.|+|+++||. +.|++.+.+. . .+|++++.++...
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~~~~---------- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ--L-KPTCAIVVETTTA---------- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH--H-CCSEEEEEEEEEE----------
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc--c-CCCEEEEEecccC----------
Confidence 9987 5799999999999886 3789999999999994 4688888763 2 4688888774210
Q ss_pred CCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEE
Q 013571 218 GPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGT 297 (440)
Q Consensus 218 g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~ 297 (440)
+ ++.|+++|++.|+.|.|++..+ .+ .+..
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i~~--------------~~-------------~~~~------------- 253 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAITF--------------YH-------------RGYV------------- 253 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEECS--------------CC-------------SSSC-------------
T ss_pred -----C------CCCCCccccCCcccCCCcEEEE--------------eC-------------CCCC-------------
Confidence 0 3567888999999998854110 00 0000
Q ss_pred EecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCccccc
Q 013571 298 FRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAED 377 (440)
Q Consensus 298 ~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD 377 (440)
.+..+.+.+++++++. |.+... .....++||
T Consensus 254 -----------------------------------------------~~~~l~~~l~~~a~~~-gi~~~~-~~~~~ggtD 284 (340)
T 2fvg_A 254 -----------------------------------------------IPKEIFQTIVDTAKNN-DIPFQM-KRRTAGGTD 284 (340)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHHHHT-TCCCEE-CCCC-----
T ss_pred -----------------------------------------------CCHHHHHHHHHHHHHc-CCCeEE-EecCCCCcc
Confidence 0111233333333332 433221 124567899
Q ss_pred HHHHHH--H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 378 FSFYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 378 ~~~~~~--~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
++.+.. . +|++.++.|. . .+|+++|+++++++..++++|..++.+++.
T Consensus 285 a~~~~~~~~GiP~v~~g~~~--~------~~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 285 AGRYARTAYGVPAGVISTPA--R------YIHSPNSIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp --------CCSCEEEEEEEE--E------ESSTTCEEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHhhCCCCcEEEecccc--c------ccCChhhcccHHHHHHHHHHHHHHHHhccc
Confidence 999886 4 8988755442 2 289999999999999999999999999875
No 32
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.90 E-value=1.7e-22 Score=198.22 Aligned_cols=256 Identities=15% Similarity=0.159 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-CCCEEEEEEecccCCC---------
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGLRAEMDALPL--------- 124 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~~~~i~~~~H~D~vp~--------- 124 (440)
+++++++++|+++||+|++|.+++++|.++|+++|++++.+. ..|++++++++ +.|+++|.||+|+||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~-~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDR-LGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEECT-TCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEcC-CCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 578899999999999999999999999999999999987654 45799988765 4589999999999982
Q ss_pred ------------------------CCC-------CCCcc--cc----------------------------c--------
Q 013571 125 ------------------------QEM-------VEWEH--KS----------------------------K-------- 135 (440)
Q Consensus 125 ------------------------~~~-------~~~~~--~~----------------------------~-------- 135 (440)
.+. +..|+ .. .
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 110 00011 00 0
Q ss_pred --------CCCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEEEEecc
Q 013571 136 --------NNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHI 204 (440)
Q Consensus 136 --------~~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~ 204 (440)
++|++|||+ ||++++++|.+++.|++.+ ++++|.|+|+++||. +.|++.+... + .+|+++++++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~--~-~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT--I-QPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc--c-CCCEEEEEec
Confidence 268999988 5799999999999998764 679999999999995 4688877542 2 4688888774
Q ss_pred CCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCc
Q 013571 205 SPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQA 284 (440)
Q Consensus 205 ~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~ 284 (440)
... +. . +|. .|+.+. ..++ .|
T Consensus 241 ~~~---~~---~-----~g~---------------~~~~~~---------------------~~lg----------~G-- 261 (373)
T 1vhe_A 241 GIA---GD---T-----PGI---------------SEKEAQ---------------------SKMG----------KG-- 261 (373)
T ss_dssp EEC---CC---S-----TTC---------------CTTTCC---------------------CCTT----------SC--
T ss_pred ccc---CC---C-----CCC---------------cccccc---------------------cccC----------CC--
Confidence 321 10 0 111 111110 0000 01
Q ss_pred ccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCC
Q 013571 285 GNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEP 364 (440)
Q Consensus 285 ~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 364 (440)
| .+.+. .. +...++++++.+++++++. |.+
T Consensus 262 ----~-------------------------------------~i~~~-----~~---~~~~~~~l~~~l~~~a~~~-gi~ 291 (373)
T 1vhe_A 262 ----P-------------------------------------QIIVY-----DA---SMVSHKGLRDAVVATAEEA-GIP 291 (373)
T ss_dssp ----C-------------------------------------EEEEE-----ET---TEECCHHHHHHHHHHHHHH-TCC
T ss_pred ----c-------------------------------------eEEEe-----CC---CCCCCHHHHHHHHHHHHHc-CCC
Confidence 0 11111 11 2456888999999999888 875
Q ss_pred CcccCCCCcccccHHHH--HHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571 365 NVHLTPVEMGAEDFSFY--TQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 434 (440)
Q Consensus 365 ~~~~~~~~~g~tD~~~~--~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~ 434 (440)
.... ....++||++++ ... +|++.++.| .. .+|+++|+++++++..+++++..++.+++..
T Consensus 292 ~~~~-~~~~ggtDa~~~~~~~~GiPtv~lg~~--~~------~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~~ 355 (373)
T 1vhe_A 292 YQFD-AIAGGGTDSGAIHLTANGVPALSITIA--TR------YIHTHAAMLHRDDYENAVKLITEVIKKLDRK 355 (373)
T ss_dssp CEEE-EETTCCCTHHHHTTSTTCCCEEEEEEE--EB------STTSSCEEEEHHHHHHHHHHHHHHHHHCCHH
T ss_pred eEEe-cCCCCCccHHHHHHhCCCCcEEEEccc--cc------cCCChhheecHHHHHHHHHHHHHHHHHhcHH
Confidence 5321 235688999999 455 898875544 22 2899999999999999999999999988654
No 33
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.89 E-value=1.1e-22 Score=196.61 Aligned_cols=243 Identities=18% Similarity=0.154 Sum_probs=175.8
Q ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCC-------------
Q 013571 57 MRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALP------------- 123 (440)
Q Consensus 57 ~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp------------- 123 (440)
+++++++|+++||+|++|.++++|+.++|+++|+ ++. +...|++++++++ .|+++|.||+|+|+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 5688999999999999999999999999999999 665 4566799998763 48999999999994
Q ss_pred ---CCCCCCC-------------------------------------------------------------------ccc
Q 013571 124 ---LQEMVEW-------------------------------------------------------------------EHK 133 (440)
Q Consensus 124 ---~~~~~~~-------------------------------------------------------------------~~~ 133 (440)
.+.|... ||.
T Consensus 81 ~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~ 160 (332)
T 2wyr_A 81 FRKVGGIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFS 160 (332)
T ss_dssp EEEESCCCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCE
T ss_pred EEecCCcChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccE
Confidence 4432110 122
Q ss_pred ccCCCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-ccchHHHHHcCCCCCCCEEEEeccCCCCCC
Q 013571 134 SKNNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPT 210 (440)
Q Consensus 134 ~~~~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~ 210 (440)
...+|++|||. ||++++++|++++.|++.+ ++++|.|+|+++||. +.|++.+++. + .+|+++++++....
T Consensus 161 ~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~~~~~-- 233 (332)
T 2wyr_A 161 VLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH--Y-YPQYAFAIDSFACC-- 233 (332)
T ss_dssp EETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT--C-CCSEEEEECCEECC--
T ss_pred EecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc--c-CCCEEEEEeccccc--
Confidence 22578999987 5799999999999998765 679999999999995 4688887642 2 47888887742210
Q ss_pred CcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCccccccc
Q 013571 211 GTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPE 290 (440)
Q Consensus 211 g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~ 290 (440)
. ++| | .+..| . |.
T Consensus 234 ~---------~p~---------~------~~~lg--------------------------~----------G~------- 246 (332)
T 2wyr_A 234 S---------PLT---------G------DVKLG--------------------------K----------GP------- 246 (332)
T ss_dssp S---------GGG---------T------TCCTT--------------------------S----------CC-------
T ss_pred C---------CCC---------C------ceeeC--------------------------C----------CC-------
Confidence 0 011 0 00000 0 10
Q ss_pred ceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCC
Q 013571 291 IVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTP 370 (440)
Q Consensus 291 ~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (440)
.+ ... .. ....++++++.+.+++++. |.+... .
T Consensus 247 ------------------------------------~i--~~~---d~---~~~~~~~l~~~l~~~~~~~-gi~~~~--~ 279 (332)
T 2wyr_A 247 ------------------------------------VI--RAV---DN---SAIYSRDLARKVWSIAEKN-GIEIQI--G 279 (332)
T ss_dssp ------------------------------------EE--EEE---CS---SCBCCHHHHHHHHHHHHHT-TCCCEE--E
T ss_pred ------------------------------------EE--EEc---CC---CCCCCHHHHHHHHHHHHHc-CCCeEE--e
Confidence 01 110 01 2456888999999999887 875532 3
Q ss_pred CCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 371 VEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 371 ~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
..+++||++++..-+|++.++.| .. .+|+++|+++++++..+++++..++.++
T Consensus 280 ~~~ggtDa~~~~~GiPtv~lg~~--~~------~~Hs~~E~v~~~dl~~~~~ll~~~~~~l 332 (332)
T 2wyr_A 280 VTGGGTDASAFQDRSKTLALSVP--IK------YLHSEVETLHLNDLEKLVKLIEALAFEL 332 (332)
T ss_dssp ECSSCCGGGGGTTTSEEEEEECE--EB------SCSSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCchHHHHHcCCCEEEEcCC--cC------CCCChhhcccHHHHHHHHHHHHHHHHhC
Confidence 45589999988766888774433 32 3899999999999999999999988753
No 34
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.88 E-value=2.6e-26 Score=221.94 Aligned_cols=330 Identities=14% Similarity=0.020 Sum_probs=176.6
Q ss_pred HHHHHHHHhCCCCCcchH-HHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCCcccccC
Q 013571 58 RRIRRRIHENPELGFEEY-ETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKN 136 (440)
Q Consensus 58 ~~~~~~l~~~ps~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~~~~~ 136 (440)
+++|++|+++||+|++|+ .+++||.++|+++|++++++.. .|++++++++ +|+|+|.||+||||..... ..+
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D~~-GNlia~~~g~-~p~lll~~H~Dtvp~~v~~-----~~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKL-GNVIAHFKGS-SPRIMVAAHMDKIGVMVNH-----IDK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEECTT-CCEEEEECCS-SSEEEEEEECCBCEEEEEE-----ECT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEeCC-CeEEEEECCC-CceEEEEeccccCCCcCCe-----eec
Confidence 478999999999999875 6899999999999999987644 4799999865 4999999999999853211 124
Q ss_pred CCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEeccCCCCCCCcc
Q 013571 137 NGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISPVLPTGTV 213 (440)
Q Consensus 137 ~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~ 213 (440)
+|++++++ ++.+.++.+.++..+...+ .+...+.++++.+||.+ .|.+.+.......+..+... +. ....+.
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~- 159 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEKG-ERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSK-EE--AEEMGF- 159 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETTE-EEEEEECCCCGGGC---------CCGGGCCEECSCSSH-HH--HHHTTC-
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhccC-CccceEEEeeeeeEecccccccchhhhhhhhhhcccch-hh--hhcccc-
Confidence 57767655 2222222233333333333 35577888889999954 45554433211111111000 00 000011
Q ss_pred cccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceE
Q 013571 214 GSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVR 293 (440)
Q Consensus 214 ~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~ 293 (440)
.....+.......+.+...|++.+..+.+++..+..++.+|......... ....+...+...++...|.++..+.
T Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 234 (354)
T 2wzn_A 160 ----RVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGDHEADIYI-VGSVQEEVGLRGARVASYAINPEVG 234 (354)
T ss_dssp ----CTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCCCSSEEEE-EEESCGGGTSHHHHHHHHHHCCSEE
T ss_pred ----ccceeeeeeeeeEeecccccccccccccchhhhHHHHHHHHHhccccccc-cccceeeeeeecccccccccccccc
Confidence 11123444555667777777776655555555544444444322100000 0000000111112235666777777
Q ss_pred EEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCc
Q 013571 294 FGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEM 373 (440)
Q Consensus 294 ~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 373 (440)
...+.+......... ... ...+....... ....+.............. +...........
T Consensus 235 ~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 294 (354)
T 2wzn_A 235 IAMDVTFAKQPHDKG------KIV----PELGKGPVMDV---------GPNINPKLRAFADEVAKKY-EIPLQVEPSPRP 294 (354)
T ss_dssp EEEEEEECCCTTSTT------CCC----CCTTSCCEEEE---------STTSCHHHHHHHHHHHHHT-TCCCEEEECCSC
T ss_pred eeeeeeeccccchhh------hhh----eeecccccccc---------ccccCcchhhhhHHHHHHh-cCCCceEEEecc
Confidence 777776654332110 000 00011111111 1112222222222222221 222222235678
Q ss_pred ccccHHHHHH--H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 374 GAEDFSFYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 374 g~tD~~~~~~--~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
|+||++++.. . +|++.+++| .. .+|++||+|+++++.+++++|.+++.+|-
T Consensus 295 ggTDa~~~~~~~~Giptv~~G~g--~~------~~Ht~~E~v~i~dl~~~~~ll~~~i~~L~ 348 (354)
T 2wzn_A 295 TGTDANVMQINKEGVATAVLSIP--IR------YMHSQVELADARDVDNTIKLAKALLEELK 348 (354)
T ss_dssp CSSHHHHHHTSTTCCEEEEEEEE--EB------STTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred cccHHHHHHHhcCCCCEEEECcc--cC------CCCcccEEEEHHHHHHHHHHHHHHHHhCc
Confidence 8999998753 3 898875554 32 28999999999999999999999999873
No 35
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.87 E-value=1.1e-21 Score=190.83 Aligned_cols=243 Identities=14% Similarity=0.071 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC-CCCEEEEEEecccC-----------
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG-GEPWFGLRAEMDAL----------- 122 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~-~~~~i~~~~H~D~v----------- 122 (440)
+++++++++|+++||+|++|.++++|+.++|+++|++++.+. ..|+++++++. ++|+|+|.||+|||
T Consensus 6 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d~-~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~G 84 (349)
T 2gre_A 6 KETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRNN-KGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPDG 84 (349)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEECS-SSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEec-CCcEEEEecCCCCCceEEEEecccccceeEEEECCCC
Confidence 678999999999999999999999999999999999987653 45799999764 34899999999999
Q ss_pred -----CCCCCCCCccc----------------------------------------------------------------
Q 013571 123 -----PLQEMVEWEHK---------------------------------------------------------------- 133 (440)
Q Consensus 123 -----p~~~~~~~~~~---------------------------------------------------------------- 133 (440)
|.+.|...+|.
T Consensus 85 ~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd 164 (349)
T 2gre_A 85 RLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGD 164 (349)
T ss_dssp CEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCTTC
T ss_pred eEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCC
Confidence 44443222221
Q ss_pred ---------ccCCCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEE
Q 013571 134 ---------SKNNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFG 201 (440)
Q Consensus 134 ---------~~~~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~ 201 (440)
...+|++|||+ +|++++++|++++.|++.+.+++++|+|+|+++||.| .|++.+ . ..++++++
T Consensus 165 ~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~----~-~~~~~~i~ 239 (349)
T 2gre_A 165 FVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI----P-EETVEYLA 239 (349)
T ss_dssp EEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC----C-TTEEEEEE
T ss_pred EEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc----c-cCCCEEEE
Confidence 01247899887 5799999999999999887778899999999999954 577654 1 24667777
Q ss_pred eccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEec
Q 013571 202 IHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDA 281 (440)
Q Consensus 202 ~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~g 281 (440)
+++... + . |-..++.| .+
T Consensus 240 ~D~~~~---~------------~------------~p~~~~~g---------------------------~~-------- 257 (349)
T 2gre_A 240 VDMGAL---G------------D------------GQASDEYT---------------------------VS-------- 257 (349)
T ss_dssp ECCCCC---S------------C------------C--CCTTS---------------------------EE--------
T ss_pred Eecccc---c------------C------------CCCCCCCc---------------------------eE--------
Confidence 663210 0 0 00000000 00
Q ss_pred CCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhc
Q 013571 282 GQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMV 361 (440)
Q Consensus 282 G~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (440)
+.+.. .. ...++.+.+.+++++++.
T Consensus 258 ----------------------------------------------i~~~~------~~--~~~~~~l~~~l~~~a~~~- 282 (349)
T 2gre_A 258 ----------------------------------------------ICAKD------SS--GPYHYALRKHLVELAKTN- 282 (349)
T ss_dssp ----------------------------------------------EEEEE------TT--EECCHHHHHHHHHHHHHH-
T ss_pred ----------------------------------------------EEEcc------CC--CCCCHHHHHHHHHHHHHc-
Confidence 01000 00 124667888888888777
Q ss_pred CCCCcccCCCCcccccHHHHHH--H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 013571 362 GEPNVHLTPVEMGAEDFSFYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAIS 430 (440)
Q Consensus 362 g~~~~~~~~~~~g~tD~~~~~~--~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~ 430 (440)
|.+.... ....++||+..+.. . +|++.++.|.. ..|+ .|+++++++..+++++..++.+
T Consensus 283 gi~~q~~-~~~ggGsDa~~~~~~~~GiPt~~lg~~~~--------~~Hs-~E~~~~~dl~~~~~ll~~~l~~ 344 (349)
T 2gre_A 283 HIEYKVD-IYPYYGSDASAAIRAGFDVKHALIGAGID--------SSHA-FERTHESSIAHTEALVYAYVMS 344 (349)
T ss_dssp TCCEEEE-ECSCC--------CCSSSCEEEEEEECCB--------STTS-SEEEEHHHHHHHHHHHHHHHHS
T ss_pred CCCcEEe-ccCCCCccHHHHHHhCCCCcEEEeccCcc--------cccc-ceeccHHHHHHHHHHHHHHHhc
Confidence 7754321 24567899988854 3 89887555432 3899 9999999999999999888764
No 36
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.87 E-value=6.4e-21 Score=185.75 Aligned_cols=250 Identities=17% Similarity=0.136 Sum_probs=175.1
Q ss_pred HHHHHHHHHhCCCCCcch-HHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCC------------
Q 013571 57 MRRIRRRIHENPELGFEE-YETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALP------------ 123 (440)
Q Consensus 57 ~~~~~~~l~~~ps~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp------------ 123 (440)
+++++++|+++||+|++| .++++++.++|+++|++++.+ ...|++++++++ +|+++|.||+|+|+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 467899999999999999 899999999999999998765 446799998765 58999999999995
Q ss_pred ----CCCCCCCcc-------------------------------------------------------------------
Q 013571 124 ----LQEMVEWEH------------------------------------------------------------------- 132 (440)
Q Consensus 124 ----~~~~~~~~~------------------------------------------------------------------- 132 (440)
.+.+...++
T Consensus 86 ~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~ 165 (353)
T 1y0y_A 86 RVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWD 165 (353)
T ss_dssp EEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEEC
T ss_pred EEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEec
Confidence 433211000
Q ss_pred ---cccCCCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEeccCC
Q 013571 133 ---KSKNNGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISP 206 (440)
Q Consensus 133 ---~~~~~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~~~~ 206 (440)
....++++|||. ||++++++|++++.|++ ++++|.|+|+++||.+ .|++.+... + .+|+++++++..
T Consensus 166 ~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~--~-~~~~~i~~d~~~ 238 (353)
T 1y0y_A 166 GRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG--I-EPDYGFAIDVTI 238 (353)
T ss_dssp CCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEEEEE
T ss_pred cCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc--c-CCCEEEEEeccc
Confidence 000145678776 57999999999999865 6789999999999954 688887642 2 468888877432
Q ss_pred CCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCccc
Q 013571 207 VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGN 286 (440)
Q Consensus 207 ~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n 286 (440)
.. + .++ +. .+.+ . .. +.+|
T Consensus 239 ~~--~----~p~------------------~~--~~~g--------------------~-~~----------lg~G---- 257 (353)
T 1y0y_A 239 AA--D----IPG------------------TP--EHKQ--------------------V-TH----------LGKG---- 257 (353)
T ss_dssp CC--C----STT------------------CC--GGGC--------------------C-CC----------TTSC----
T ss_pred cc--C----CCC------------------Cc--cccC--------------------c-cc----------cCCC----
Confidence 10 0 000 00 0000 0 00 0011
Q ss_pred ccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCc
Q 013571 287 IIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNV 366 (440)
Q Consensus 287 ~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 366 (440)
|. +.+.. . ....++++++.+++++++. |.+..
T Consensus 258 --~~-------------------------------------i~~~d-----~---~~~~~~~l~~~l~~~a~~~-gi~~~ 289 (353)
T 1y0y_A 258 --TA-------------------------------------IKIMD-----R---SVICHPTIVRWLEELAKKH-EIPYQ 289 (353)
T ss_dssp --EE-------------------------------------EEEEE-----T---TEECCHHHHHHHHHHHHHT-TCCEE
T ss_pred --cE-------------------------------------EEEeC-----C---CCCCCHHHHHHHHHHHHHc-CCCEE
Confidence 00 11100 1 2456788999999999887 87543
Q ss_pred ccCCCCcccccHHHH--HHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 367 HLTPVEMGAEDFSFY--TQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 367 ~~~~~~~g~tD~~~~--~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
.. ....++||++.+ ... +|++.++.|. . .+|+++|+++++++..++++|..++.++..
T Consensus 290 ~~-~~~~ggsDa~~~~~~~~GiPtv~lg~~~--~------~~Hs~~E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 290 LE-ILLGGGTDAGAIHLTKAGVPTGALSVPA--R------YIHSNTEVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp EE-ECSSCCCTHHHHTTSTTCCCEEEEEEEE--B------SCSSSCEEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred Ee-ecCCCCchHHHHHHhCCCCcEEEEcccc--c------ccCCHHHhcCHHHHHHHHHHHHHHHHhhhh
Confidence 21 246789999999 455 8988755542 2 389999999999999999999999998754
No 37
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.86 E-value=9.6e-21 Score=184.10 Aligned_cols=250 Identities=14% Similarity=0.083 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCC-----------
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALP----------- 123 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp----------- 123 (440)
.++++++++|+++||+|++|.++++++.++|+++|++++.+. ..|+++++++.+.|.++|.||+|||+
T Consensus 5 ~~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~-~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l 83 (346)
T 1vho_A 5 METGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTTR-HGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFA 83 (346)
T ss_dssp CCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEECT-TSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEE
T ss_pred HHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEec-CCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeE
Confidence 356789999999999999999999999999999999987654 45799998764448999999999994
Q ss_pred ----CCCCCCCccc--------------c------------------------------------------------cCC
Q 013571 124 ----LQEMVEWEHK--------------S------------------------------------------------KNN 137 (440)
Q Consensus 124 ----~~~~~~~~~~--------------~------------------------------------------------~~~ 137 (440)
.+.|...+.. . ..+
T Consensus 84 ~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g 163 (346)
T 1vho_A 84 RLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETN 163 (346)
T ss_dssp EEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEET
T ss_pred EEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhc
Confidence 3322111000 0 002
Q ss_pred Ccccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEeccCCCCCCCccc
Q 013571 138 GKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVG 214 (440)
Q Consensus 138 g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~ 214 (440)
|+++||+ ++.++++++.+++.+++.+ +++++.++|+.+||.+ .|+..... .+ .++++++++..
T Consensus 164 ~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~--~i-~~~~~i~~D~~--------- 229 (346)
T 1vho_A 164 GKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY--EI-NPDAAIVMDVT--------- 229 (346)
T ss_dssp TEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC--CC-CCSEEEEEEEE---------
T ss_pred CeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc--cc-CCCEEEEeecc---------
Confidence 5678877 4689999999999998754 6689999999999964 56654321 12 34555554421
Q ss_pred ccCCCcccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceE
Q 013571 215 SRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVR 293 (440)
Q Consensus 215 ~~~g~~~~g~~~~~i~v~G~~~Hss-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~ 293 (440)
|++ .|. .+ . . ..+ +
T Consensus 230 ----------------------~~~~~~~--~~--~-----------~------~~~----------~------------ 244 (346)
T 1vho_A 230 ----------------------FASEPPF--SD--H-----------I------ELG----------K------------ 244 (346)
T ss_dssp ----------------------CCCCTTS--CC--C-----------C------CTT----------S------------
T ss_pred ----------------------cccCCCC--Cc--c-----------c------ccC----------C------------
Confidence 111 110 00 0 0 000 0
Q ss_pred EEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCC-
Q 013571 294 FGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVE- 372 (440)
Q Consensus 294 ~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 372 (440)
|..+++ +...++++++.+++++++. |.+... ...
T Consensus 245 -------------------------------g~~i~~-----------~~~~~~~l~~~~~~~a~~~-gi~~~~--~~~~ 279 (346)
T 1vho_A 245 -------------------------------GPVIGL-----------GPVVDRNLVQKIIEIAKKH-NVSLQE--EAVG 279 (346)
T ss_dssp -------------------------------CCEEEC-----------STTSCHHHHHHHHHHHHHT-TCCCEE--ESSC
T ss_pred -------------------------------CceEEe-----------CCcCCHHHHHHHHHHHHHC-CCCEEE--EeCC
Confidence 112221 2356888999999999987 886543 233
Q ss_pred c-ccccHHHHHH--H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhccccc
Q 013571 373 M-GAEDFSFYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLEV 437 (440)
Q Consensus 373 ~-g~tD~~~~~~--~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~~~ 437 (440)
. ++||++.+.. . +|++.+++|.. .+|+++|+++++++..++++|..++.+++.+++.
T Consensus 280 g~ggsDa~~~~~~~~gipt~~lg~~~~--------~~Hs~~E~~~~~dl~~~~~ll~~~~~~~~~~~~~ 340 (346)
T 1vho_A 280 GRSGTETDFVQLVRNGVRTSLISIPLK--------YMHTPVEMVDPRDVEELARLLSLVAVELEVEGGS 340 (346)
T ss_dssp CC----CTTHHHHHTTCEEEEEEEECB--------STTSTTEEECHHHHHHHHHHHHHHHHHCC-----
T ss_pred CCCCchHHHHHHhCCCCcEEEEehhhc--------ccccHHHhcCHHHHHHHHHHHHHHHHHhhhhcCc
Confidence 4 8999999964 3 89888666532 2999999999999999999999999999877553
No 38
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.84 E-value=6.7e-21 Score=182.82 Aligned_cols=237 Identities=12% Similarity=0.039 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecC----C--CceEEEEEcCCCCCEEEEEEecccCC----
Q 013571 54 FEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV----A--KTGIVASVGSGGEPWFGLRAEMDALP---- 123 (440)
Q Consensus 54 ~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~----~--~~nv~~~~~~~~~~~i~~~~H~D~vp---- 123 (440)
++++++++++|+++||+|++|.++++++.++|+++|++++.+. . ..|+++.+++ + |+++|.||+|||+
T Consensus 16 ~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~~v~ 93 (321)
T 3cpx_A 16 YFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGFTVS 93 (321)
T ss_dssp GCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCCeEec
Confidence 3888999999999999999999999999999999999876544 1 4579998876 4 8899999999994
Q ss_pred -------CCCCCCCc---c----------------------------------------cccCCCcccccc--hhHHHHH
Q 013571 124 -------LQEMVEWE---H----------------------------------------KSKNNGKMHGCG--HDVHTTI 151 (440)
Q Consensus 124 -------~~~~~~~~---~----------------------------------------~~~~~g~i~GrG--~k~~~a~ 151 (440)
.+.+..|+ + ... +|+++||+ +|+++++
T Consensus 94 ~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~-~g~i~~~~~D~k~G~aa 172 (321)
T 3cpx_A 94 YNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREE-GDFILTPYLDDRLGVWT 172 (321)
T ss_dssp STTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEE-TTEEECTTHHHHHHHHH
T ss_pred ccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEE-cCEEEEcCCcCHHHHHH
Confidence 33222221 0 001 26777777 5789999
Q ss_pred HHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHH---HcCCCCCCCEEEEeccCCCCCCCcccccCCCcccceeEE
Q 013571 152 LLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMI---KEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRF 227 (440)
Q Consensus 152 ~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~---~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~ 227 (440)
++++++.++ + ++++|+.+||.| .|+.... .+. + ..|+++++++.. .+
T Consensus 173 ~l~al~~l~-----~---i~~~~t~~EEvG~~Ga~~a~~~~~~~-~-~~~~~i~~D~~~---------------~~---- 223 (321)
T 3cpx_A 173 ALELAKTLE-----H---GIIAFTCWEEHGGGSVAYLARWIYET-F-HVKQSLICDITW---------------VT---- 223 (321)
T ss_dssp HHHHTTTCC-----S---EEEEEESSTTTTCCSHHHHHHHHHHH-H-CCCEEEECCCEE---------------CC----
T ss_pred HHHHHHHhc-----C---cEEEEECCccCchhcchhhhhccccc-c-CCCEEEEEeCcc---------------cc----
Confidence 999988754 1 999999999954 5766432 111 2 457777766311 01
Q ss_pred EEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEecCChhhHH
Q 013571 228 TAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLL 307 (440)
Q Consensus 228 ~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~ 307 (440)
| .. .. .
T Consensus 224 ---------~-------------------------~~---~~----------~--------------------------- 229 (321)
T 3cpx_A 224 ---------E-------------------------GV---EA----------G--------------------------- 229 (321)
T ss_dssp ---------S-------------------------SS---CT----------T---------------------------
T ss_pred ---------C-------------------------Cc---cc----------C---------------------------
Confidence 0 00 00 0
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHH--H-
Q 013571 308 YLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ--R- 384 (440)
Q Consensus 308 ~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~- 384 (440)
.|.. ++. .. ..+.++++++.+++++++. |.+.... ...+|+||++.+.. .
T Consensus 230 ----------------~G~~--i~~----~~---~~~~~~~l~~~~~~~a~~~-gi~~q~~-~~~~GGsD~~~~~~s~~G 282 (321)
T 3cpx_A 230 ----------------KGVA--ISM----RD---RMIPRKKYVNRIIELARQT-DIPFQLE-VEGAGASDGRELQLSPYP 282 (321)
T ss_dssp ----------------SCEE--EEE----ES---SSCCCHHHHHHHHHHHTTS-SCCEEEE-ECSSCCCHHHHHHHSSSC
T ss_pred ----------------CCcE--EEE----CC---CCCCCHHHHHHHHHHHHHc-CCCEEEE-eCCCCCccHHHHHHhCCC
Confidence 0111 222 11 2346788999999999887 8754321 23778999999853 4
Q ss_pred hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 013571 385 MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 431 (440)
Q Consensus 385 ~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~ 431 (440)
+|++. +|++.. .+|+++|+++++++..+++++..++.++
T Consensus 283 ipt~~--lG~~~~------~~Hs~~E~~~~~dl~~~~~ll~~~~~~l 321 (321)
T 3cpx_A 283 WDWCF--IGAPEK------DAHTPNECVHKKDIESMVGLYKYLMEKL 321 (321)
T ss_dssp CBCCB--EECEEB------STTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred CCEEE--Echhhc------ccchhhhheeHHHHHHHHHHHHHHHHhC
Confidence 89886 444433 3999999999999999999999988753
No 39
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.83 E-value=2.7e-19 Score=174.04 Aligned_cols=250 Identities=14% Similarity=0.100 Sum_probs=172.5
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCC---------------
Q 013571 59 RIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALP--------------- 123 (440)
Q Consensus 59 ~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp--------------- 123 (440)
+++++|+++||+|++|.++++|+.++|+++|++++.+.. .|+++++++.+.|+|+|.||+|||+
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d~~-gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFDGL-GSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEECTT-CCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEecC-CCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 679999999999999999999999999999999876543 4799998765458999999999995
Q ss_pred -CCCCC--CC----------------------------------------------------------cccccCCCcccc
Q 013571 124 -LQEMV--EW----------------------------------------------------------EHKSKNNGKMHG 142 (440)
Q Consensus 124 -~~~~~--~~----------------------------------------------------------~~~~~~~g~i~G 142 (440)
.+.+. .| +|....+|+++|
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 11110 00 001114578888
Q ss_pred cc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEeccCCCCCCCcccccCCC
Q 013571 143 CG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGP 219 (440)
Q Consensus 143 rG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~ 219 (440)
++ +++++++++.+++.+++.+ ++.++.++|+.+||.+ .|+...... + .+|++++++.... +
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~--i-~~~~~i~~D~~~~---~-------- 229 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTACW---A-------- 229 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH--H-CCSEEEEECCCCC---S--------
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc--c-CCCEEEEEecccc---C--------
Confidence 88 4689999999999987654 6789999999999954 566554332 2 3577777663210 0
Q ss_pred cccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccceEEEEEEe
Q 013571 220 LLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFR 299 (440)
Q Consensus 220 ~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a~~~~~~R 299 (440)
..|. .+. . .. ... ..|
T Consensus 230 -------------------~~~~--~~~-----------~----~~-~~~----------~~G----------------- 245 (348)
T 1ylo_A 230 -------------------KNFD--YGA-----------A----NH-RQI----------GNG----------------- 245 (348)
T ss_dssp -------------------STTC--CST-----------T----CC-CCT----------TSC-----------------
T ss_pred -------------------CCCC--CCc-----------c----cc-ccC----------CCC-----------------
Confidence 0111 110 0 00 000 001
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCCcccccHH
Q 013571 300 SLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFS 379 (440)
Q Consensus 300 ~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~ 379 (440)
..+++. .. +...++.+++.+++++++. |.+.... ....++||++
T Consensus 246 --------------------------~~i~~~-----~~---~~~~~~~l~~~~~~~a~~~-gi~~~~~-~~~~ggsDa~ 289 (348)
T 1ylo_A 246 --------------------------PMLVLS-----DK---SLIAPPKLTAWIETVAAEI-GVPLQAD-MFSNGGTDGG 289 (348)
T ss_dssp --------------------------CEEEEE-----CS---SCBCCHHHHHHHHHHHHHH-TCCCEEE-ECSSCCCHHH
T ss_pred --------------------------cEEEEe-----CC---CCCCCHHHHHHHHHHHHHc-CCCeEEe-ecCCCcchHH
Confidence 112221 11 2346788999999999887 8755431 2467899999
Q ss_pred HHHH--H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 013571 380 FYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 380 ~~~~--~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
.+.. . +|++.+++| .. .+|+++|+++++++..+++++..++.++..
T Consensus 290 ~~~~~~~gipt~~lg~~--~~------~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 290 AVHLTGTGVPTLVMGPA--TR------HGHCAASIADCRDILQMEQLLSALIQRLTR 338 (348)
T ss_dssp HHHTSTTCCCEEEEECC--CB------SCSSSCEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred HHHHhcCCCCEEEECcc--cC------cCCCcceEeeHHHHHHHHHHHHHHHHHhhH
Confidence 9964 3 898874444 22 399999999999999999999999988754
No 40
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.77 E-value=2e-17 Score=155.94 Aligned_cols=135 Identities=13% Similarity=0.105 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHhCCCCCc--------chHHHHHHHHHHHHhCCCceeecCC------CceEEEEEcCC-CCCEEEEEEec
Q 013571 55 EWMRRIRRRIHENPELGF--------EEYETSQLVRSELDSLGIEYTWPVA------KTGIVASVGSG-GEPWFGLRAEM 119 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~--------~e~~~~~~l~~~l~~~G~~~~~~~~------~~nv~~~~~~~-~~~~i~~~~H~ 119 (440)
+++++++++|++|||+++ .|.++++||.++|+++|++++.+.. +.|++++++++ +++.|+|.||+
T Consensus 7 ~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH~ 86 (284)
T 1tkj_A 7 ANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAHL 86 (284)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEeec
Confidence 788899999999998876 6789999999999999998876422 57999999765 44789999999
Q ss_pred ccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCC---CC
Q 013571 120 DALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAV---DK 195 (440)
Q Consensus 120 D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~---~~ 195 (440)
|+||.+. | +.++|++++++|++++.|++.+.+++++|.|+|+++||.+ .|++.++++... .+
T Consensus 87 D~v~~g~-----------G---a~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~ 152 (284)
T 1tkj_A 87 DSVSSGA-----------G---INDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSADRSK 152 (284)
T ss_dssp CCCTTSC-----------C---TTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCHHHHTT
T ss_pred CCCCCCC-----------C---CccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhCccchhhc
Confidence 9998531 1 1236799999999999999988789999999999999954 699999876321 23
Q ss_pred CCEEEEec
Q 013571 196 FQGMFGIH 203 (440)
Q Consensus 196 ~d~~~~~~ 203 (440)
+++++.++
T Consensus 153 ~~~~i~~D 160 (284)
T 1tkj_A 153 LAGYLNFD 160 (284)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 45555554
No 41
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.66 E-value=5e-16 Score=147.50 Aligned_cols=127 Identities=12% Similarity=0.125 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHhCCC---CCcchHHHHHHHHHHHHhCCC--c-eeecC------CCceEEEEEcCCC--CCEEEEEEecc
Q 013571 55 EWMRRIRRRIHENPE---LGFEEYETSQLVRSELDSLGI--E-YTWPV------AKTGIVASVGSGG--EPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps---~s~~e~~~~~~l~~~l~~~G~--~-~~~~~------~~~nv~~~~~~~~--~~~i~~~~H~D 120 (440)
+++++++++|+++++ .|..+.++++||.++|+++|+ + ++.+. ...|++++++|+. .+.|+|.||+|
T Consensus 20 ~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D 99 (299)
T 1rtq_A 20 SQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLD 99 (299)
T ss_dssp HHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccc
Confidence 889999999999984 466788999999999999874 3 32221 2479999997652 47899999999
Q ss_pred cCCCCCCCCCcccccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHc
Q 013571 121 ALPLQEMVEWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKE 190 (440)
Q Consensus 121 ~vp~~~~~~~~~~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~ 190 (440)
|||. .|+ ++.+||+| +|++++++|++++.|++.+.+++++|.|+|+++||.| .|++.++++
T Consensus 100 ~v~~----~~~-----~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 164 (299)
T 1rtq_A 100 STIG----SHT-----NEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQ 164 (299)
T ss_dssp CCSS----TTC-----CTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred cCCC----cCc-----CCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCchhHHHHHHh
Confidence 9982 242 25688998 4789999999999999988789999999999999954 699988775
No 42
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.66 E-value=5.5e-15 Score=142.71 Aligned_cols=247 Identities=14% Similarity=0.031 Sum_probs=165.5
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCC--CCCEEEEEEecccCCC-----CC-C
Q 013571 56 WMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSG--GEPWFGLRAEMDALPL-----QE-M 127 (440)
Q Consensus 56 ~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~--~~~~i~~~~H~D~vp~-----~~-~ 127 (440)
++++++++|+++|++|++|.++++|+.++|+++|++++.+. ..|+++++++. ++|+|+|.||+|+|+. .+ +
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D~-~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G 82 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTDG-LGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDG 82 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEECT-TSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEECC-CCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCC
Confidence 57899999999999999999999999999999999988654 45799999765 3699999999999974 11 1
Q ss_pred -------CCCc------------------cccc-------------C---------------------------------
Q 013571 128 -------VEWE------------------HKSK-------------N--------------------------------- 136 (440)
Q Consensus 128 -------~~~~------------------~~~~-------------~--------------------------------- 136 (440)
..|. +..+ +
T Consensus 83 ~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~ 162 (355)
T 3kl9_A 83 TFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIV 162 (355)
T ss_dssp CEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEE
T ss_pred EEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEE
Confidence 1121 0000 0
Q ss_pred ----------CCcccccc--hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcCCCCCCCEEEEec
Q 013571 137 ----------NGKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEGAVDKFQGMFGIH 203 (440)
Q Consensus 137 ----------~g~i~GrG--~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~~~~~~d~~~~~~ 203 (440)
++++.|+. ++.++++++.+++.+++. +++.+++++|+..||.| .|+...... + .+|.+++++
T Consensus 163 ~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~--~-~pd~~i~~D 237 (355)
T 3kl9_A 163 PDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK--F-DPEVFLAVD 237 (355)
T ss_dssp ECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEE
T ss_pred eccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc--c-CCCEEEEec
Confidence 02355555 357899999999988764 47899999999999955 565544332 1 244444433
Q ss_pred cCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCC
Q 013571 204 ISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQ 283 (440)
Q Consensus 204 ~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~ 283 (440)
. . |+..+
T Consensus 238 ~-------------------------~------~a~d~------------------------------------------ 244 (355)
T 3kl9_A 238 C-------------------------S------PAGDV------------------------------------------ 244 (355)
T ss_dssp E-------------------------E------ECCGG------------------------------------------
T ss_pred C-------------------------c------cCCCC------------------------------------------
Confidence 1 0 11111
Q ss_pred cccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCC
Q 013571 284 AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGE 363 (440)
Q Consensus 284 ~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 363 (440)
|+. ....|....+.. ... ....+..+.+.+++++++. |.
T Consensus 245 -----p~~-----------------------------~~~lg~G~~i~~----~d~--~~~~~~~l~~~l~~~a~~~-gI 283 (355)
T 3kl9_A 245 -----YGG-----------------------------QGKIGDGTLIRF----YDP--GHLLLPGMKDFLLTTAEEA-GI 283 (355)
T ss_dssp -----GTS-----------------------------SCCTTSCEEEEE----EET--TEECCHHHHHHHHHHHHHT-TC
T ss_pred -----CCc-----------------------------ccccCCCcEEEE----ecC--CCCCCHHHHHHHHHHHHHc-CC
Confidence 000 000011111111 011 1234667777777777776 76
Q ss_pred CCcccCCCCcccccHHHHHH--H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 013571 364 PNVHLTPVEMGAEDFSFYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432 (440)
Q Consensus 364 ~~~~~~~~~~g~tD~~~~~~--~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~ 432 (440)
+... ....|+||++.+.. . +|++.+++|.. ..|++.|+++++++..+++++.+++.++-
T Consensus 284 p~q~--~~~ggGtDa~~i~~a~~Gipt~~igvp~~--------~~Hs~~E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 284 KYQY--YCGKGGTDAGAAHLKNGGVPSTTIGVCAR--------YIHSHQTLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp CEEE--EECSSCCTHHHHTTSTTCCCEEEEEEEEB--------SCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred CEEE--ECCCcchHHHHHHHhCCCCCEEEEccCcC--------CCCCcceEeeHHHHHHHHHHHHHHHHHhC
Confidence 4432 23458999998874 3 89888777643 29999999999999999999999987763
No 43
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.63 E-value=9.2e-15 Score=138.74 Aligned_cols=131 Identities=15% Similarity=0.069 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHhCC---CCCcchHHHHHHHHHHHHhCCCceeecC-------C----CceEEEEEcCCCCCEEEEEEecc
Q 013571 55 EWMRRIRRRIHENP---ELGFEEYETSQLVRSELDSLGIEYTWPV-------A----KTGIVASVGSGGEPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~~~~~l~~~p---s~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~----~~nv~~~~~~~~~~~i~~~~H~D 120 (440)
+++.+.+++|.++. ..|..+.++++||.++|+++|++++.+. + ..||++++++.+.+.|++.||||
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 67777788877654 4466789999999999999999986521 1 37999999887668999999999
Q ss_pred cCCCCCCCCCcccccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-c-------------cc
Q 013571 121 ALPLQEMVEWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-Y-------------GG 183 (440)
Q Consensus 121 ~vp~~~~~~~~~~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~-------------~G 183 (440)
+||.++. .|+. .++|++| +| +++++|++|++++.|++.+ ++++|.|+|+.+||. . .|
T Consensus 105 sv~~~~~--~p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDH--DPDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTT--CSSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCC--Cccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 9997642 3544 3456777 55 3579999999999999874 899999999999994 4 69
Q ss_pred hHHHHHcC
Q 013571 184 AYYMIKEG 191 (440)
Q Consensus 184 ~~~l~~~~ 191 (440)
+++++++.
T Consensus 179 S~~~~~~~ 186 (309)
T 3tc8_A 179 TQFWAKNP 186 (309)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhCC
Confidence 99998753
No 44
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.59 E-value=2.2e-14 Score=136.16 Aligned_cols=131 Identities=15% Similarity=0.119 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHhCCC---CCcchHHHHHHHHHHHHhCCCceeecC-------C----CceEEEEEcCCCCCEEEEEEecc
Q 013571 55 EWMRRIRRRIHENPE---LGFEEYETSQLVRSELDSLGIEYTWPV-------A----KTGIVASVGSGGEPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps---~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~----~~nv~~~~~~~~~~~i~~~~H~D 120 (440)
+++.+.+++|+++++ .|..+.++++||.++|+++|++++.+. + ..||++++++.+.+.|++.||||
T Consensus 27 ~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 106 (314)
T 3gux_A 27 DSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWD 106 (314)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEcccc
Confidence 788888999988864 345678999999999999999886521 1 37999999876668999999999
Q ss_pred cCCCCCCCCCcccccCCCcccccc---hhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCc-c--------------c
Q 013571 121 ALPLQEMVEWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-Y--------------G 182 (440)
Q Consensus 121 ~vp~~~~~~~~~~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-~--------------~ 182 (440)
+||.++. .|+. ..++. +++| +++++|++|++++.|++.+ ++++|.|+++.+||. . .
T Consensus 107 sv~~~~~--~p~~-~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~ 180 (314)
T 3gux_A 107 SRPYADN--DPDP-KNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWCL 180 (314)
T ss_dssp CCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSCH
T ss_pred CCCcCCC--Cccc-ccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccch
Confidence 9997542 2332 22333 3466 4689999999999999874 899999999999994 4 6
Q ss_pred chHHHHHcC
Q 013571 183 GAYYMIKEG 191 (440)
Q Consensus 183 G~~~l~~~~ 191 (440)
|+++++++.
T Consensus 181 GS~~~~~~~ 189 (314)
T 3gux_A 181 GSQYWARTP 189 (314)
T ss_dssp HHHHHHHSC
T ss_pred hHHHHHhCC
Confidence 899998753
No 45
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.57 E-value=3.6e-14 Score=136.85 Aligned_cols=66 Identities=18% Similarity=0.186 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCCCCcchH-HHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCC
Q 013571 57 MRRIRRRIHENPELGFEEY-ETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPL 124 (440)
Q Consensus 57 ~~~~~~~l~~~ps~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~ 124 (440)
+++++++|+++|++|+.|. ++++|+.++|+++|++++.+. ..|+++++++++ |+|+|.||+|+|+.
T Consensus 11 ~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D~-~GNvi~~~~g~~-~~v~l~aHmDtVg~ 77 (354)
T 2vpu_A 11 DWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDK-LGNVIAHFKGSS-PRIMVAAHMDKIGV 77 (354)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEECT-TCCEEEEECCSS-SEEEEECCCCBCEE
T ss_pred HHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEcC-CCeEEEEEcCCC-CEEEEEecccccce
Confidence 5788999999999999999 999999999999999887654 457999997665 99999999999974
No 46
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.52 E-value=4.4e-14 Score=135.74 Aligned_cols=126 Identities=16% Similarity=0.217 Sum_probs=98.5
Q ss_pred HHH-HHHHHHHHhCCCC-CcchHHHHHHHHHHHHh--CCCceeecC----------CCceEEEEEcCCCCCEEEEEEecc
Q 013571 55 EWM-RRIRRRIHENPEL-GFEEYETSQLVRSELDS--LGIEYTWPV----------AKTGIVASVGSGGEPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~-~~~~~~l~~~ps~-s~~e~~~~~~l~~~l~~--~G~~~~~~~----------~~~nv~~~~~~~~~~~i~~~~H~D 120 (440)
+++ .+++++|+..+.+ +..+.++++||.++|++ .|++++.+. ...||+|+++|++.+.|++.||+|
T Consensus 31 ~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~D 110 (329)
T 2afw_A 31 SEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHYD 110 (329)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEecc
Confidence 778 8888888755543 44567899999999999 999887532 147999999876568999999999
Q ss_pred cCCCCCCCCCcccccCCCcccccc---hhHHHHHHHHHHHHHHhc--------ccCCCceEEEEEeccCCc--------c
Q 013571 121 ALPLQEMVEWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHR--------MDRLKGTVKLVFQPGEEG--------Y 181 (440)
Q Consensus 121 ~vp~~~~~~~~~~~~~~g~i~GrG---~k~~~a~~l~a~~~l~~~--------~~~~~~~v~~~~~~dEE~--------~ 181 (440)
+||.+ .| +|++ |+| +++++|++|++++.|++. +.+++++|.|+++.+||. +
T Consensus 111 sv~~~---~~------~~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~g 180 (329)
T 2afw_A 111 SKYFS---HW------NNRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDS 180 (329)
T ss_dssp CCCCC---CB------TTBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSS
T ss_pred CCCcC---cc------cCcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCcc
Confidence 99975 23 2444 666 468999999999999876 357899999999999996 3
Q ss_pred -cchHHHHHc
Q 013571 182 -GGAYYMIKE 190 (440)
Q Consensus 182 -~G~~~l~~~ 190 (440)
.|+++++++
T Consensus 181 l~Gs~~~~~~ 190 (329)
T 2afw_A 181 LYGSRHLAAK 190 (329)
T ss_dssp CHHHHHHHHH
T ss_pred chhHHHHHHH
Confidence 499988775
No 47
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.43 E-value=2.8e-12 Score=122.73 Aligned_cols=68 Identities=21% Similarity=0.176 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPL 124 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~ 124 (440)
..+.+++++|.++|++|+.|.++++++.++++++|.+++.+.. .|+++++++ ++|+|+|.||+|+|..
T Consensus 11 ~~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D~~-Gnvi~~~g~-~~~~v~l~aHmDevG~ 78 (343)
T 3isx_A 11 HHMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRIDGL-GNLIVWKGS-GEKKVILDAHIDEIGV 78 (343)
T ss_dssp SCCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEECTT-CCEEEEECC-CSSEEEEEEECCBCEE
T ss_pred HHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEECCC-CCEEEEECC-CCCEEEEEecccccce
Confidence 3456889999999999999999999999999999998877554 469999853 5599999999999964
No 48
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.35 E-value=3.2e-11 Score=114.67 Aligned_cols=133 Identities=16% Similarity=0.153 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHhC---CCCCcchHHHHHHHHHHHHhCCCceeec-------C----CCceEEEEEcCCCCCEEEEEEecc
Q 013571 55 EWMRRIRRRIHEN---PELGFEEYETSQLVRSELDSLGIEYTWP-------V----AKTGIVASVGSGGEPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~~~~~l~~~---ps~s~~e~~~~~~l~~~l~~~G~~~~~~-------~----~~~nv~~~~~~~~~~~i~~~~H~D 120 (440)
++..+.++.++++ +..|....++++||.++|+++|++++.. . ...|||+++++...+.|++.||||
T Consensus 25 ~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~D 104 (309)
T 4fuu_A 25 DSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeecC
Confidence 6777778888775 3445566889999999999999998651 1 135899999887668999999999
Q ss_pred cCCCCCCCCCcccccCCCcccccchh-HHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc---------------cch
Q 013571 121 ALPLQEMVEWEHKSKNNGKMHGCGHD-VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY---------------GGA 184 (440)
Q Consensus 121 ~vp~~~~~~~~~~~~~~g~i~GrG~k-~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~---------------~G~ 184 (440)
++|.++....+.. .+...-|..|+ +++|++|++++.|.+. +++++|.|+|..+||.| .|+
T Consensus 105 s~~~~~~~~~~~~--~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS 180 (309)
T 4fuu_A 105 TRPWADNDADEKN--HHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGS 180 (309)
T ss_dssp CCSCCTTCSSGGG--TTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHH
T ss_pred CCCCCCCcccccc--ccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcch
Confidence 9986543221111 11112233344 5999999999999876 58999999999999954 488
Q ss_pred HHHHHcC
Q 013571 185 YYMIKEG 191 (440)
Q Consensus 185 ~~l~~~~ 191 (440)
.++++..
T Consensus 181 ~~~~~~~ 187 (309)
T 4fuu_A 181 QYWSRNP 187 (309)
T ss_dssp HHHHHSC
T ss_pred hHHHhcc
Confidence 8887753
No 49
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.34 E-value=1.4e-11 Score=118.17 Aligned_cols=138 Identities=19% Similarity=0.256 Sum_probs=100.0
Q ss_pred HHHHHHHHHH-HhCCCCCcchHHHHHHHHHHHHhCCCceeec------C-----CCceEEEEEcCCCCCEEEEEEecccC
Q 013571 55 EWMRRIRRRI-HENPELGFEEYETSQLVRSELDSLGIEYTWP------V-----AKTGIVASVGSGGEPWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l-~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~------~-----~~~nv~~~~~~~~~~~i~~~~H~D~v 122 (440)
.++.++++.+ +.++..|....++++||.+.|+++|++++.. . ...||||+++++....|++.||||++
T Consensus 38 ~~~~~~l~~il~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~~~~i~l~aHyDs~ 117 (330)
T 4fai_A 38 LHLREAIDKILIPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDSK 117 (330)
T ss_dssp HHHHHHHHHHCSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTCSEEEEEEEECCCC
T ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCCCcEEEEEEeeccc
Confidence 5666667665 3333445566889999999999999988651 1 13689999987765789999999999
Q ss_pred CCCCCCCCcccccCCCcccccchh-HHHHHHHHHHHHHHhc---ccCCCceEEEEEeccCCcc---------cchHHHHH
Q 013571 123 PLQEMVEWEHKSKNNGKMHGCGHD-VHTTILLGAARLLKHR---MDRLKGTVKLVFQPGEEGY---------GGAYYMIK 189 (440)
Q Consensus 123 p~~~~~~~~~~~~~~g~i~GrG~k-~~~a~~l~a~~~l~~~---~~~~~~~v~~~~~~dEE~~---------~G~~~l~~ 189 (440)
+..+ ...-|..|+ +|+|++|++++.|.+. +.+++++|.|+|..+||.| .|++++++
T Consensus 118 ~~~~-----------~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~ 186 (330)
T 4fai_A 118 YMPG-----------VEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAK 186 (330)
T ss_dssp CCTT-----------SCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHH
T ss_pred cccc-----------CCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHHHHh
Confidence 7432 112243444 6999999999999753 5578999999999999965 39999987
Q ss_pred c----CCCCCCCEEEEec
Q 013571 190 E----GAVDKFQGMFGIH 203 (440)
Q Consensus 190 ~----~~~~~~d~~~~~~ 203 (440)
+ +..+.+.+.+.++
T Consensus 187 ~~~~~~~~~~i~~~inlD 204 (330)
T 4fai_A 187 KWHHEGKLDRIDMLVLLD 204 (330)
T ss_dssp HHHHTTCSTTEEEEEEEC
T ss_pred cchhccchhceeEEEEec
Confidence 4 2233455555544
No 50
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.32 E-value=6.2e-12 Score=119.85 Aligned_cols=127 Identities=17% Similarity=0.173 Sum_probs=94.5
Q ss_pred HHHHH-HHHH-HHhCCCCCcchHHHHHHHHHHHHhC--CCceeecCC----------CceEEEEEcCCCCCEEEEEEecc
Q 013571 55 EWMRR-IRRR-IHENPELGFEEYETSQLVRSELDSL--GIEYTWPVA----------KTGIVASVGSGGEPWFGLRAEMD 120 (440)
Q Consensus 55 ~~~~~-~~~~-l~~~ps~s~~e~~~~~~l~~~l~~~--G~~~~~~~~----------~~nv~~~~~~~~~~~i~~~~H~D 120 (440)
+++.+ +++. +..+...|..+.++++||.++|+++ |++++.+.. ..||+|+++++..+.|++.+|||
T Consensus 39 ~~~~~~~L~~~~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~D 118 (330)
T 3pb6_X 39 QRLWSTYLRPLLVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHYD 118 (330)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEeccC
Confidence 44444 4444 4445566777788999999999999 888765321 26999999877658999999999
Q ss_pred cCCCCCCCCCcccccCCCcccccch-hHHHHHHHHHHHHHHhc-----ccCCCceEEEEEeccCCc--------c-cchH
Q 013571 121 ALPLQEMVEWEHKSKNNGKMHGCGH-DVHTTILLGAARLLKHR-----MDRLKGTVKLVFQPGEEG--------Y-GGAY 185 (440)
Q Consensus 121 ~vp~~~~~~~~~~~~~~g~i~GrG~-k~~~a~~l~a~~~l~~~-----~~~~~~~v~~~~~~dEE~--------~-~G~~ 185 (440)
+|+..++ +...-|..| .+|+|++|++++.|.+. +.+++++|.|+|..+||. + .|++
T Consensus 119 sv~~~~g---------~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~ 189 (330)
T 3pb6_X 119 SKLFPPG---------STPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSR 189 (330)
T ss_dssp CCCCCTT---------SCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHH
T ss_pred CCCCCCC---------CcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHH
Confidence 9974211 012223334 46999999999999873 357899999999999997 5 4999
Q ss_pred HHHHc
Q 013571 186 YMIKE 190 (440)
Q Consensus 186 ~l~~~ 190 (440)
+++++
T Consensus 190 ~~a~~ 194 (330)
T 3pb6_X 190 HLAQL 194 (330)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 51
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.30 E-value=1.8e-11 Score=116.66 Aligned_cols=126 Identities=17% Similarity=0.220 Sum_probs=93.5
Q ss_pred HHHHHHHHHHH-hCCCCCcchHHHHHHHHHHHHhCCCceeecC-----------CCceEEEEEcCCCCCEEEEEEecccC
Q 013571 55 EWMRRIRRRIH-ENPELGFEEYETSQLVRSELDSLGIEYTWPV-----------AKTGIVASVGSGGEPWFGLRAEMDAL 122 (440)
Q Consensus 55 ~~~~~~~~~l~-~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nv~~~~~~~~~~~i~~~~H~D~v 122 (440)
..+-++|+.+. .++..|....++++||.++|+++|++++... ...||||++++...+.|++.||||+.
T Consensus 11 ~~~~~~l~~il~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs~ 90 (312)
T 4f9u_A 11 VHFNRTLDSILVPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDSK 90 (312)
T ss_dssp HHHHHHHHHHCSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCCC
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEecC
Confidence 44555566653 2334455567899999999999999886521 13599999988766899999999998
Q ss_pred CCCCCCCCcccccCCCcccccchh-HHHHHHHHHHHHHHhc-----ccCCCceEEEEEeccCCcc---------cchHHH
Q 013571 123 PLQEMVEWEHKSKNNGKMHGCGHD-VHTTILLGAARLLKHR-----MDRLKGTVKLVFQPGEEGY---------GGAYYM 187 (440)
Q Consensus 123 p~~~~~~~~~~~~~~g~i~GrG~k-~~~a~~l~a~~~l~~~-----~~~~~~~v~~~~~~dEE~~---------~G~~~l 187 (440)
+.+.. ....|..|+ +|+|++|++++.|.+. +.+|+++|.|+|..+||.| .|++++
T Consensus 91 ~~~~~----------~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~ 160 (312)
T 4f9u_A 91 YFPND----------PGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHL 160 (312)
T ss_dssp CCTTC----------TTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHH
T ss_pred CCCCC----------CCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHHH
Confidence 75321 112344454 6999999999999753 4568999999999999954 489988
Q ss_pred HHc
Q 013571 188 IKE 190 (440)
Q Consensus 188 ~~~ 190 (440)
+++
T Consensus 161 a~~ 163 (312)
T 4f9u_A 161 AAK 163 (312)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 52
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.09 E-value=7.3e-11 Score=90.17 Aligned_cols=80 Identities=16% Similarity=0.103 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHH
Q 013571 347 EKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHA 425 (440)
Q Consensus 347 ~~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~ 425 (440)
+++++.++++++++ |.++. +...+|+||+++|... +|++. +||+... ...+|++||+|++++|.+++++|+
T Consensus 1 ~~~v~~l~~a~~~~-g~~~~--~~~~~g~TDar~~~~~gip~v~--fGPg~~~---~~~~H~~dE~v~i~~l~~~~~iy~ 72 (88)
T 1q7l_B 1 NPWWAAFSRVCKDM-NLTLE--PEIMPAAGDNRYIRAVGVPALG--FSPMNRT---PVLLHDHDERLHEAVFLRGVDIYT 72 (88)
T ss_dssp CHHHHHHHHHHHHT-TCCEE--EEECCSCSHHHHHHHTTCCEEE--ECCCCSC---CCCTTSTTCEEEHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHc-CCeeE--eeeeceeCcHHHHHHcCCCEEE--ECCCCCC---cccccCCCCeeEHHHHHHHHHHHH
Confidence 36899999999998 87553 4688999999999887 78655 6776431 235999999999999999999999
Q ss_pred HHHHHHhcc
Q 013571 426 AVAISYLDN 434 (440)
Q Consensus 426 ~~~~~~~~~ 434 (440)
+++.++++.
T Consensus 73 ~~i~~~~~~ 81 (88)
T 1q7l_B 73 RLLPALASV 81 (88)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHcC
Confidence 999999875
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.69 E-value=5.6e-08 Score=96.89 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHhCC-Cceee--------cCCCceEEEEEcCCC--CCEEEEEEecccCCCCCCCCCcccccCCCccccc
Q 013571 75 YETSQLVRSELDSLG-IEYTW--------PVAKTGIVASVGSGG--EPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGC 143 (440)
Q Consensus 75 ~~~~~~l~~~l~~~G-~~~~~--------~~~~~nv~~~~~~~~--~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~Gr 143 (440)
.+.++.|.+.++.-. +++.. .....||+++++|+. .+.|++.+|+|+++.+. | +.
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~-----------G---a~ 268 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDEGT-----------G---AI 268 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSSSC-----------C---TT
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCCCC-----------C---Cc
Confidence 445677777775421 32221 123469999998763 47899999999998431 1 12
Q ss_pred chhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHcC
Q 013571 144 GHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKEG 191 (440)
Q Consensus 144 G~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~~ 191 (440)
+++++++++|++++.|++.+.+++++|.|++..+||.+ .|+++++++.
T Consensus 269 D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~ 317 (444)
T 3iib_A 269 DDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEH 317 (444)
T ss_dssp TTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhh
Confidence 24679999999999999988889999999999999954 6999998864
No 54
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.66 E-value=8.4e-08 Score=95.10 Aligned_cols=100 Identities=10% Similarity=0.115 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHH---h--CCCceeecC----CCceEEEEEcCC-----CCCEEEEEEecccCCCCCCCCCcccccCCCcc
Q 013571 75 YETSQLVRSELD---S--LGIEYTWPV----AKTGIVASVGSG-----GEPWFGLRAEMDALPLQEMVEWEHKSKNNGKM 140 (440)
Q Consensus 75 ~~~~~~l~~~l~---~--~G~~~~~~~----~~~nv~~~~~~~-----~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i 140 (440)
.+.+++|.++++ + .++++..+. ...||+++++|+ +.+.|++.+|+|+|+.+. |.
T Consensus 171 ~~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~-----------Ga- 238 (421)
T 2ek8_A 171 KQEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAP-----------GA- 238 (421)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCC-----------CT-
T ss_pred HHHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCCC-----------CC-
Confidence 345677888883 2 223332211 147899999773 458899999999998421 11
Q ss_pred cccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcc-cchHHHHHc
Q 013571 141 HGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-GGAYYMIKE 190 (440)
Q Consensus 141 ~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~-~G~~~l~~~ 190 (440)
.+++++++++|++++.|++. +++++|.|+++.+||.+ .|+++++++
T Consensus 239 --~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 239 --NDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp --TTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred --CCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 12468999999999999875 47899999999999954 699999875
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.24 E-value=1.9e-06 Score=89.76 Aligned_cols=77 Identities=17% Similarity=0.134 Sum_probs=63.1
Q ss_pred CceEEEEEcCC--CCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHh---cccCCCceEEE
Q 013571 98 KTGIVASVGSG--GEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKH---RMDRLKGTVKL 172 (440)
Q Consensus 98 ~~nv~~~~~~~--~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~---~~~~~~~~v~~ 172 (440)
..||+|+++|. +.+.|++.+|+|+++. | |.++.+|++++|++++.|.+ .|++|+++|.|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-------------G---a~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVF-------------G---AIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSS-------------C---TTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCC-------------C---CccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 36899999886 3578999999999972 2 22345799999999999876 46789999999
Q ss_pred EEeccCCc-ccchHHHHHc
Q 013571 173 VFQPGEEG-YGGAYYMIKE 190 (440)
Q Consensus 173 ~~~~dEE~-~~G~~~l~~~ 190 (440)
++..+||. ..|+.+++++
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~ 394 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEE 394 (707)
T ss_dssp EEESCGGGTSHHHHHHHHH
T ss_pred EEeCCccccchhHHHHHHh
Confidence 99999995 4699999875
No 56
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.14 E-value=4e-06 Score=86.53 Aligned_cols=78 Identities=15% Similarity=0.068 Sum_probs=63.6
Q ss_pred CceEEEEEcCC--CCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhc----ccCCCceEE
Q 013571 98 KTGIVASVGSG--GEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHR----MDRLKGTVK 171 (440)
Q Consensus 98 ~~nv~~~~~~~--~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~----~~~~~~~v~ 171 (440)
..||+|+++|+ +.+.|++.+|+|++.. |. .++.+|++++|++++.|.+. +++|+++|.
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-------------Ga---~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~ 329 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGP-------------GA---AKSGVGTALLLKLAQMFSDMVLKDGFQPSRSII 329 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSC-------------CT---TTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCC-------------CC---CcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEE
Confidence 46899999876 3478999999999952 21 12357999999999999864 678999999
Q ss_pred EEEeccCCc-ccchHHHHHcC
Q 013571 172 LVFQPGEEG-YGGAYYMIKEG 191 (440)
Q Consensus 172 ~~~~~dEE~-~~G~~~l~~~~ 191 (440)
|++..+||. ..|+.+++++.
T Consensus 330 f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 330 FASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEESSGGGTSHHHHHHHHHT
T ss_pred EEEECCcccCchhHHHHHHhh
Confidence 999999995 46999999864
No 57
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=93.87 E-value=0.31 Score=46.91 Aligned_cols=84 Identities=11% Similarity=0.001 Sum_probs=57.9
Q ss_pred CceEEEEE--cCCCCCEEEEEEecccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEe
Q 013571 98 KTGIVASV--GSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQ 175 (440)
Q Consensus 98 ~~nv~~~~--~~~~~~~i~~~~H~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~ 175 (440)
+..-++.+ +|...+.|++.+|+|+ |. + +-++-+|+|++++.+++|++. .++.++.|+|.
T Consensus 165 G~l~y~e~~ipG~t~~~IllsaH~cH-P~-------------~---ANDNaSG~a~lleLar~l~~~--~~~~t~rFvf~ 225 (435)
T 3k9t_A 165 GSLTYGEYYIRGELEEEILLTTYTCH-PS-------------M---CNDNLSGVALITFIAKALSKL--KTKYSYRFLFA 225 (435)
T ss_dssp CEEEEEEEEECCSSSCEEEEEEECCC-CS-------------C---TTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEE
T ss_pred CceEEEEEEecCCCCCEEEEEEEcCC-CC-------------C---CCccchHHHHHHHHHHHHhcC--CCCceEEEEEc
Confidence 44455655 7766699999999998 31 1 111236899999999999864 48899999999
Q ss_pred ccCCcccchHHHHHcCC--CCCCCEEEEec
Q 013571 176 PGEEGYGGAYYMIKEGA--VDKFQGMFGIH 203 (440)
Q Consensus 176 ~dEE~~~G~~~l~~~~~--~~~~d~~~~~~ 203 (440)
++ . .|+..++.+.. .+.+.+.+.++
T Consensus 226 pg-~--iGS~~yl~~~~~~l~~i~a~lnLD 252 (435)
T 3k9t_A 226 PE-T--IGSITWLSRNEDKLKNIKMGLVAT 252 (435)
T ss_dssp CT-T--HHHHHHHHHCGGGGGGEEEEEECC
T ss_pred Cc-c--HHHHHHHHhChHhhhceEEEEEEE
Confidence 82 2 58887776543 23444555544
No 58
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=91.80 E-value=0.26 Score=48.81 Aligned_cols=80 Identities=11% Similarity=-0.002 Sum_probs=60.1
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCC---CcccccHHHHHH-H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTPV---EMGAEDFSFYTQ-R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 419 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~g~tD~~~~~~-~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~ 419 (440)
.++.+...+++++++. |.+.+..... ..|+|++..... . +|++.+++|.. ..|++.|-++.+++..
T Consensus 404 t~~~~~~~l~~ia~~~-~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~r--------yMHS~~E~~~~~D~~~ 474 (496)
T 3vat_A 404 SNAVSEALIREVASSV-GVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQL--------AMHSIRETACTTGVLQ 474 (496)
T ss_dssp CCHHHHHHHHHHHHHH-TCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEE--------STTSSSEEEESHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHhcccCCcEEEecHhhh--------ccccHHHHhhHHHHHH
Confidence 4778899999999888 8754432211 356777765553 3 89888666643 3999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 013571 420 GAALHAAVAISYLD 433 (440)
Q Consensus 420 ~~~~~~~~~~~~~~ 433 (440)
+++++..++.++-.
T Consensus 475 ~v~Ll~af~~~~~~ 488 (496)
T 3vat_A 475 TITLFKGFFELFPS 488 (496)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHH
Confidence 99999999987744
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=91.59 E-value=0.22 Score=48.90 Aligned_cols=78 Identities=10% Similarity=0.017 Sum_probs=57.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCC---CCcccccHHHHHHH--hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTP---VEMGAEDFSFYTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 419 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~g~tD~~~~~~~--~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~ 419 (440)
.++.+...+++++++. |.+.+.... ..+|+||.+.+... +|++-++++.. ..|++.|-++.+++..
T Consensus 368 ~~~~~~~~~~~ia~~~-~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP~l--------~MHS~~E~~~~~D~~~ 438 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ-GVIWQVATLGKVDQGGGGTIAKFFAERGSDVIDMGPALL--------GMHSPFEISSKADLFE 438 (450)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEEEECEEB--------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEEechhhc--------ccchHHHHhhHHHHHH
Confidence 4677888899999887 875443212 14566776666544 78887666643 3899999999999999
Q ss_pred HHHHHHHHHHHH
Q 013571 420 GAALHAAVAISY 431 (440)
Q Consensus 420 ~~~~~~~~~~~~ 431 (440)
++++|..++.++
T Consensus 439 ~~~l~~af~~~l 450 (450)
T 2glf_A 439 TYVAYRSLMEKL 450 (450)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999988753
No 60
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=89.91 E-value=0.15 Score=49.94 Aligned_cols=76 Identities=8% Similarity=-0.054 Sum_probs=57.1
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCC--CcccccHHHHHH--H-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTPV--EMGAEDFSFYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 419 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~g~tD~~~~~~--~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~ 419 (440)
.+..+.+.+++++++. |.+.+..... .+|+||++.+.. . +|++.+++| .. ..|++.|.+..+++..
T Consensus 343 ~~~~~~~~l~~~a~~~-~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip--~~------~mHS~~E~~~~~D~~~ 413 (428)
T 2ijz_A 343 TNSETAGFFRHLCQDS-EVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLP--TF------AMHSIRELAGSHDLAH 413 (428)
T ss_dssp CCHHHHTTTTHHHHHT-CCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCC--CC------SCSSSSCCCCSSHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEEchh--hc------ccchHHHHhhHHHHHH
Confidence 5788888999999887 8754432121 567888888754 3 788774444 32 3999999999999999
Q ss_pred HHHHHHHHHH
Q 013571 420 GAALHAAVAI 429 (440)
Q Consensus 420 ~~~~~~~~~~ 429 (440)
+++++..++.
T Consensus 414 ~~~ll~af~~ 423 (428)
T 2ijz_A 414 LVKVLGAFYA 423 (428)
T ss_dssp HHTTHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999988765
No 61
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=88.79 E-value=0.16 Score=50.17 Aligned_cols=76 Identities=12% Similarity=-0.046 Sum_probs=54.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCcccCCC----CcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchH
Q 013571 344 VNDEKMYEHGKRVGASMVGEPNVHLTPV----EMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALP 418 (440)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~ 418 (440)
..+..+.+.+++++++. |.+.+..... ..|+|++.++++. +|++.+++|.. ..|++.|.+..+++.
T Consensus 376 ~~~~~~~~~l~~~a~~~-~Ip~Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvdiGiP~~--------~mHS~~E~~~~~Di~ 446 (458)
T 1y7e_A 376 DADAELVSYIRQLLNKN-NIAWQVATLGKVEEGGGGTVAKFLAGYGIRTIDMGPAVI--------SMHSPMEITSKFDLY 446 (458)
T ss_dssp --CHHHHHHHHHHHHHH-TCCEEEEEECC-----CHHHHHHHHHHTCEEEEECCEEB--------STTSSSEEEEHHHHH
T ss_pred cCCHHHHHHHHHHHHHc-CCCeEEEEeeccCCCCcCcHHHHHhCCCCCEEEEchhhc--------ccchHHHHhhHHHHH
Confidence 34778899999999988 8754432111 4567777666655 89887555533 389999999999999
Q ss_pred HHHHHHHHHH
Q 013571 419 IGAALHAAVA 428 (440)
Q Consensus 419 ~~~~~~~~~~ 428 (440)
.+++++..++
T Consensus 447 ~~~~ll~af~ 456 (458)
T 1y7e_A 447 NAYLAYKAFY 456 (458)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 9999988765
No 62
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=86.74 E-value=0.84 Score=45.84 Aligned_cols=81 Identities=12% Similarity=-0.074 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHHHhhc-----CCCCcccCC---CCcccccHHHHHH-H-hccceEEEccCCCCCCCCCCCCCCCCCCCC
Q 013571 345 NDEKMYEHGKRVGASMV-----GEPNVHLTP---VEMGAEDFSFYTQ-R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDE 414 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~-----g~~~~~~~~---~~~g~tD~~~~~~-~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~ 414 (440)
.++.+...+++++++.. |.+.+.... ...|+|++..... . +|++.+++|.. .+|++.|-+..
T Consensus 472 tn~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~r--------yMHS~~E~~~~ 543 (571)
T 4eme_A 472 TSPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQL--------AMHSIREIAAV 543 (571)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEE--------STTSSSEEEEH
T ss_pred cCHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhh--------ccchHHHHhhH
Confidence 36778888888887652 443222111 1357777766553 3 89888666643 39999999999
Q ss_pred CchHHHHHHHHHHHHHHhc
Q 013571 415 DALPIGAALHAAVAISYLD 433 (440)
Q Consensus 415 ~~l~~~~~~~~~~~~~~~~ 433 (440)
+++..+++++..++.++-.
T Consensus 544 ~Dv~~~vkLl~aFl~~~~~ 562 (571)
T 4eme_A 544 HDVFFLIKGVFAFYTYYNQ 562 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHH
Confidence 9999999999999988743
No 63
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=86.19 E-value=1.1 Score=43.84 Aligned_cols=68 Identities=15% Similarity=-0.047 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCcee-e------------cCCCceEEEEEcCCC--CCEEEEEEecc
Q 013571 56 WMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYT-W------------PVAKTGIVASVGSGG--EPWFGLRAEMD 120 (440)
Q Consensus 56 ~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~-~------------~~~~~nv~~~~~~~~--~~~i~~~~H~D 120 (440)
++.++.++++.+-.-+.-+.++.++++++|++.||.-- + +..+.|+++...|++ .+.+++.||+|
T Consensus 15 ~~~~~~~~~~~Fl~~s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~D 94 (450)
T 2glf_A 15 EIEAFSKEYMEFMSKAKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHID 94 (450)
T ss_dssp HHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecc
Confidence 33334444444444455678999999999999999531 1 112357999865532 37899999999
Q ss_pred cCC
Q 013571 121 ALP 123 (440)
Q Consensus 121 ~vp 123 (440)
.+.
T Consensus 95 sp~ 97 (450)
T 2glf_A 95 SPR 97 (450)
T ss_dssp CCE
T ss_pred cCC
Confidence 873
No 64
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=85.76 E-value=0.2 Score=49.02 Aligned_cols=62 Identities=10% Similarity=0.078 Sum_probs=43.5
Q ss_pred HHHHhCCCCCcchHHHHHHHHHHHHhCCCc---------------eeecCCCceEEEEEcCCC----CCEEEEEEecccC
Q 013571 62 RRIHENPELGFEEYETSQLVRSELDSLGIE---------------YTWPVAKTGIVASVGSGG----EPWFGLRAEMDAL 122 (440)
Q Consensus 62 ~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~---------------~~~~~~~~nv~~~~~~~~----~~~i~~~~H~D~v 122 (440)
++++.+-.-|.-+.++.+++.++|++.||. +..+..+.|+++...|+. .+.+++.||+|..
T Consensus 6 ~~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 6 QGLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp --CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 455566666777889999999999999982 222333367999875532 4789999999998
Q ss_pred C
Q 013571 123 P 123 (440)
Q Consensus 123 p 123 (440)
.
T Consensus 86 g 86 (428)
T 2ijz_A 86 C 86 (428)
T ss_dssp E
T ss_pred C
Confidence 4
No 65
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=85.08 E-value=1.9 Score=42.41 Aligned_cols=120 Identities=13% Similarity=-0.034 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec-------CCCceEEEEEcCCC-CCEEEEEEecccCCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP-------VAKTGIVASVGSGG-EPWFGLRAEMDALPLQE 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~-------~~~~nv~~~~~~~~-~~~i~~~~H~D~vp~~~ 126 (440)
-+-..+.|+|++-|.---.....+++..+.+++.|+++++. .+-+.+++.=+|+. .|.++..-+. |.++
T Consensus 167 a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~---~~~~ 243 (491)
T 2hc9_A 167 SESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHE---VPGS 243 (491)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEEC---CTTC
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeC---CCCC
Confidence 45677889999999877778899999999999999998761 11222332223332 2444433322 2111
Q ss_pred CC-------CCcccc----cC-CCcccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 127 MV-------EWEHKS----KN-NGKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 127 ~~-------~~~~~~----~~-~g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
.. +..|++ .+ .+-|.+ +.|.+|.|+.+++++++.+.+ ++.+|..+....|=
T Consensus 244 ~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 244 TEHIALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHG--FSQTLHACLCIVEN 307 (491)
T ss_dssp SCEEEEEEEEEEEECCTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTTT--CCSEEEEEEEEEEE
T ss_pred CCcEEEEcCceEecCCCccCCCCcChhhccccccHHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 00 011221 01 111221 224589999999999999875 77889888777776
No 66
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=84.58 E-value=0.54 Score=46.32 Aligned_cols=62 Identities=10% Similarity=0.037 Sum_probs=39.0
Q ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHhCCCc-------------eeecCCCceEEEEE-cCC---CCCEEEEEEecccCC
Q 013571 61 RRRIHENPELGFEEYETSQLVRSELDSLGIE-------------YTWPVAKTGIVASV-GSG---GEPWFGLRAEMDALP 123 (440)
Q Consensus 61 ~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~-------------~~~~~~~~nv~~~~-~~~---~~~~i~~~~H~D~vp 123 (440)
.++++.+-.-|.-+.++.+++.++|++.||. +..+..+..+++.. +.. .++. ++.||+|...
T Consensus 22 ~~~~~~fl~~spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dspg 100 (458)
T 1y7e_A 22 SESYKKFISKFKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSPR 100 (458)
T ss_dssp HHHHHHHHHHCCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCCB
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcCC
Confidence 3344444444555679999999999999986 33333343344332 332 2355 9999999984
No 67
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=84.00 E-value=2.4 Score=41.70 Aligned_cols=120 Identities=13% Similarity=-0.002 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCC--Cceeec-------CCCceEEEEEcCCC-CCEEEEEEecccCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLG--IEYTWP-------VAKTGIVASVGSGG-EPWFGLRAEMDALPL 124 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G--~~~~~~-------~~~~nv~~~~~~~~-~~~i~~~~H~D~vp~ 124 (440)
.+-+.+.|+|++-|.---.....+++.++.+++.| +++++. .+-..+++.=+|+. .|.++..-+. |.
T Consensus 161 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~---g~ 237 (484)
T 1lam_A 161 ASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYK---GS 237 (484)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEE---CS
T ss_pred HHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEEC---CC
Confidence 45667899999999887778899999999999999 887751 12222333323432 2444433331 21
Q ss_pred CCCCCCc---------ccc----cC-CCcccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 125 QEMVEWE---------HKS----KN-NGKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 125 ~~~~~~~---------~~~----~~-~g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
+.....| |.+ .+ .+-|.+ +.|.+|.|+.+++++++.+.+ ++-+|..+....|=
T Consensus 238 ~~~~~~~i~LVGKGITFDsGG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--l~vnv~~~i~~~EN 305 (484)
T 1lam_A 238 PNASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLD--LPINIVGLAPLCEN 305 (484)
T ss_dssp SSTTSCCEEEEECEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCCCCCcEEEEecceEEcCCCcCCcCccchhhhhccchHHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 1001122 221 11 111211 123489999999999999875 77888888777766
No 68
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=83.98 E-value=1.9 Score=42.48 Aligned_cols=119 Identities=9% Similarity=-0.051 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec-------CCCceEEEEEcCCCC-CEEEEEEecccCCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP-------VAKTGIVASVGSGGE-PWFGLRAEMDALPLQE 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~-------~~~~nv~~~~~~~~~-~~i~~~~H~D~vp~~~ 126 (440)
.+-+.+.|+|++-|.---.....+++.++.+++.|+++++. .+-..+++.=+|+.. |.++.. +|- |.++
T Consensus 197 a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l-~y~--g~~~ 273 (515)
T 3kzw_A 197 GQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTI-TYN--GKDK 273 (515)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEE-EEE--SSCS
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEE-EEC--CCCC
Confidence 45567899999999887788899999999999999988751 111222222233322 333322 221 1111
Q ss_pred CCCCc---------ccc----cCCC-cccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 127 MVEWE---------HKS----KNNG-KMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 127 ~~~~~---------~~~----~~~g-~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
...| |++ .+.+ -|.+ +.|.+|.|+.+++++++.+.+ ++-+|..+....|=
T Consensus 274 -~~~~i~LVGKGiTFDsGG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 274 -DEAPIALVGKGITYDSGGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAEN 338 (515)
T ss_dssp -SCCCEEEEEEEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEE
T ss_pred -CCCcEEEecCceEEecCCcCCCCccChhhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 1112 221 0100 1111 113489999999999999875 77888888777766
No 69
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=83.45 E-value=1.4 Score=42.96 Aligned_cols=120 Identities=15% Similarity=0.044 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecC------CCceEEEEEcCCCC-CEEEEEEecccCCCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV------AKTGIVASVGSGGE-PWFGLRAEMDALPLQEM 127 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nv~~~~~~~~~-~~i~~~~H~D~vp~~~~ 127 (440)
.+-+.+.|+|++.|.---.....+++.++.+++.|+++++.+ +-..+++.=+++.. |.++.. +| . |.++.
T Consensus 167 a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l-~y-~-~~~~~ 243 (482)
T 3ij3_A 167 LTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDL-KW-G-DIKAP 243 (482)
T ss_dssp HHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEE-EE-S-CTTSC
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEE-Ee-C-CCCCC
Confidence 456778999999998767778889999999999999887521 11112222234432 444433 44 1 21110
Q ss_pred ------CCCcccc----cCCC-cccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 128 ------VEWEHKS----KNNG-KMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 128 ------~~~~~~~----~~~g-~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
....|++ .+.+ -|.. +.|.+|.|+.+++++++.+.+ ++.+|..+....|=
T Consensus 244 ~i~LVGKGITFDsGGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 244 KVTLVGKGVCFDSGGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQ--LPVRLRLLIPAVEN 305 (482)
T ss_dssp EEEEEECEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred eEEEEccceEeecCCccCcCccchhhccccchHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 0111221 0100 1111 113489999999999999875 77889888777766
No 70
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=81.66 E-value=0.82 Score=45.06 Aligned_cols=75 Identities=9% Similarity=-0.008 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCC---C-CcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCchHH
Q 013571 345 NDEKMYEHGKRVGASMVGEPNVHLTP---V-EMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 419 (440)
Q Consensus 345 ~~~~~~~~~~~~~~~~~g~~~~~~~~---~-~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~ 419 (440)
.+..+...+++++++. |.+.+.... . ..|+|.+..+++. +|++-+++|.. ..|++.|.+..+++..
T Consensus 380 ~~~~~~~~l~~ia~~~-~Ip~Q~~~~gr~d~~~GgTig~~~a~~Gi~tvdiGiP~l--------~MHS~~E~~~~~Di~~ 450 (461)
T 2glj_A 380 ANPEYIAELRRILSKE-SVNWQTAELGKVDQGGGGTIAYILAEYGMQVIDCGVALL--------NMHAPWEISSKADIYE 450 (461)
T ss_dssp CCHHHHHHHHHHHHHT-CCCEEECCSSSSSSSCCCCTHHHHHTTTCBCCBBCCEEE--------STTSSSEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCeEEEeeeccCCCCcccHHHHHhCCCCCEEEEchhhc--------ccchHHHHhhHHHHHH
Confidence 4778888999999888 875443111 1 3467766556544 88887555533 3899999999999999
Q ss_pred HHHHHHHHH
Q 013571 420 GAALHAAVA 428 (440)
Q Consensus 420 ~~~~~~~~~ 428 (440)
+++++..++
T Consensus 451 ~~~l~~af~ 459 (461)
T 2glj_A 451 TKNGYSAFL 459 (461)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHH
Confidence 999987654
No 71
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=81.61 E-value=2.6 Score=41.72 Aligned_cols=120 Identities=13% Similarity=-0.011 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCC--Cceeec-------CCCceEEEEEcCCC-CCEEEEEEecccCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLG--IEYTWP-------VAKTGIVASVGSGG-EPWFGLRAEMDALPL 124 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G--~~~~~~-------~~~~nv~~~~~~~~-~~~i~~~~H~D~vp~ 124 (440)
.+-+.+.|+|++-|.---.....+++.++.+++.| +++++. .+-..+++.=+|+. .|.++.. +|- |.
T Consensus 181 a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l-~Y~--g~ 257 (503)
T 1gyt_A 181 AAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVI-EYK--GN 257 (503)
T ss_dssp HHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEE-EEE--CC
T ss_pred HHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEE-EEC--CC
Confidence 45677899999999887778899999999999999 888751 11222232223332 2333332 221 11
Q ss_pred CCCCCCc---------ccc----cC-CCcccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 125 QEMVEWE---------HKS----KN-NGKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 125 ~~~~~~~---------~~~----~~-~g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
++....| |++ .+ .+-|.+ +.|.+|.|+.+++++++.+.+ ++-+|+.+....|=
T Consensus 258 ~~~~~~~i~LVGKGITFDsGGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~--l~vnV~~~i~~~EN 325 (503)
T 1gyt_A 258 ASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQ--LPINVIGVLAGCEN 325 (503)
T ss_dssp CCTTCCCEEEEEEEEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCCCCcEEEEcCceEecCCCccccCCcChhhcccccchHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 1101111 221 11 111221 223489999999999999875 77899888877776
No 72
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=81.28 E-value=2.4 Score=41.72 Aligned_cols=117 Identities=10% Similarity=-0.006 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecC-------CCceEEEEEcCCCC-CEEEEEEecccCCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPV-------AKTGIVASVGSGGE-PWFGLRAEMDALPLQE 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nv~~~~~~~~~-~~i~~~~H~D~vp~~~ 126 (440)
-+-+.+.|+|++.|.---.....+++..+.+++.|++++..+ +-..+++.=+|+.. |.++.. +|- |.++
T Consensus 204 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L-~Y~--g~~~ 280 (522)
T 4efd_A 204 ATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTL-LYT--PKGT 280 (522)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEE-EEC--CSSC
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEE-EEC--CCCC
Confidence 355678999999998877888999999999999999887521 11222222233322 333333 221 1111
Q ss_pred CCCCc---------ccccCCCc-------ccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 127 MVEWE---------HKSKNNGK-------MHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 127 ~~~~~---------~~~~~~g~-------i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
...| |++ +|. |.+ +.|.+|.|+.+++++++.+.+ ++.+|..+....|=
T Consensus 281 -~~~~iaLVGKGITFDS--GGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l~--lpvnV~~vl~~~EN 345 (522)
T 4efd_A 281 -PVKKVSLVGKGIVYDC--GGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRLQ--QPVQLSCTLCLAEN 345 (522)
T ss_dssp -CSEEEEEEEEEEETCC--CCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHHT--CSEEEEEEEEEEEC
T ss_pred -CCCcEEEecCceEeec--CCccCCCccchhhcccccchHHHHHHHHHHHHHcC--CCceEEEEEEEecc
Confidence 0111 221 121 111 113488999999999998875 77888888777766
No 73
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=79.82 E-value=3.7 Score=40.37 Aligned_cols=120 Identities=8% Similarity=-0.009 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCceeec-------CCCceEEEEEcCCCC-CEEEEEEecccCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSL-GIEYTWP-------VAKTGIVASVGSGGE-PWFGLRAEMDALPLQ 125 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~-G~~~~~~-------~~~~nv~~~~~~~~~-~~i~~~~H~D~vp~~ 125 (440)
.+-+.+.|+|++-|.---.....+++.++.+++. |+++++. .+-..+++.=+|+.. |.++.. +|- |.+
T Consensus 176 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l-~y~--g~~ 252 (490)
T 3jru_B 176 AEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVL-KWN--GGG 252 (490)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEE-EEE--TTT
T ss_pred HHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEE-EEc--CCC
Confidence 4667889999999988778889999999999887 9988751 111222222233322 333332 221 111
Q ss_pred CC-------CCCcccc----cCC-Ccccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 126 EM-------VEWEHKS----KNN-GKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 126 ~~-------~~~~~~~----~~~-g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
.. ....|++ .+. +-|.+ +.|.+|.|+.+++++++.+.+ ++-+|..+....|=
T Consensus 253 ~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 317 (490)
T 3jru_B 253 DARPYVLVGKGITFDTGGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAE--LPINLVVVVPAVEN 317 (490)
T ss_dssp TSCCEEEEECEEEEECCTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCCcEEEEcCeeEecCCCccCCCcccHhhCcccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 00 0111221 111 11221 223489999999999999875 77888888777766
No 74
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=79.67 E-value=3.7 Score=40.47 Aligned_cols=120 Identities=8% Similarity=-0.040 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCceeec-------CCCceEEEEEcCCCC-CEEEEEEecccCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSL-GIEYTWP-------VAKTGIVASVGSGGE-PWFGLRAEMDALPLQ 125 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~-G~~~~~~-------~~~~nv~~~~~~~~~-~~i~~~~H~D~vp~~ 125 (440)
.+-+.+.|+|++-|.---.....+++.++.++.. |+++++. .+-..+++.=+|+.. |.++.. +|- |.+
T Consensus 180 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l-~y~--g~~ 256 (497)
T 3h8g_F 180 ATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVL-NYQ--GGK 256 (497)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEE-EEE--CSC
T ss_pred HHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEE-EEC--CCC
Confidence 4567789999999988778889999999999999 9988751 111212222223322 333322 221 111
Q ss_pred CC--------CCCcccc----cCC-Ccccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 126 EM--------VEWEHKS----KNN-GKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 126 ~~--------~~~~~~~----~~~-g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
+. ....|++ .+. +-|.+ +.|.+|.|+.+++++++.+.+ ++-+|..+....|=
T Consensus 257 ~~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 257 KADKPFVLVGKGITFDTGGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQ--LPVNLVCLLACAEN 322 (497)
T ss_dssp TTSCCEEEEEEEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCCcEEEEcCceEeccCCccCCCccchhhccccchHHHHHHHHHHHHHHcC--CCeEEEEEEEeecc
Confidence 10 0111221 111 11221 223489999999999999875 77899888877776
No 75
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=77.89 E-value=3.8 Score=40.23 Aligned_cols=119 Identities=9% Similarity=-0.052 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhC-CCceeec-------CCCceEEEEEcCCCC-CEEEEEEecccCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSL-GIEYTWP-------VAKTGIVASVGSGGE-PWFGLRAEMDALPLQ 125 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~-G~~~~~~-------~~~~nv~~~~~~~~~-~~i~~~~H~D~vp~~ 125 (440)
.+-+.+.|+|++.|.---.....+++.++.++.. |+++++. .+-..+++.=+|+.. |.++.. +|- |.+
T Consensus 164 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l-~y~--g~~ 240 (486)
T 3pei_A 164 ACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCM-EYK--GGN 240 (486)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEE-EEE--CSC
T ss_pred HHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEE-EEC--CCC
Confidence 4567789999999987777889999999999998 8988751 111222222233322 333322 221 111
Q ss_pred CCCCCc---------ccc----cCC-Ccccc-cchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCC
Q 013571 126 EMVEWE---------HKS----KNN-GKMHG-CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE 179 (440)
Q Consensus 126 ~~~~~~---------~~~----~~~-g~i~G-rG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 179 (440)
+ ...| |++ .+. +-|.+ +.|.+|.|+.+++++++.+.+ ++-+|..+....|=
T Consensus 241 ~-~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~i~~~EN 306 (486)
T 3pei_A 241 E-GDAPIVLVGKGLVFDNGGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLN--LPVNVVGVMGLAEN 306 (486)
T ss_dssp T-TSCCEEEEEEEEETEECC------------EECSHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEC
T ss_pred C-CCCcEEEEccceEEecCCcccCCccchhhhhccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 1 1112 221 010 11111 113489999999999999875 77899888877776
No 76
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=75.62 E-value=48 Score=32.72 Aligned_cols=120 Identities=10% Similarity=-0.033 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeec-------CCCceEEEEEcCCCC-CEEEEEEecccCCCCC
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWP-------VAKTGIVASVGSGGE-PWFGLRAEMDALPLQE 126 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~-------~~~~nv~~~~~~~~~-~~i~~~~H~D~vp~~~ 126 (440)
-+-+.+.|+|++.|.---.....++...+..++.|+++++. .+-..+++.=+|+.. |.++.. +|- |.++
T Consensus 205 a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l-~y~--g~~~ 281 (528)
T 3kr4_A 205 YFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHL-TYK--SKGD 281 (528)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEE-EEE--CSSC
T ss_pred HHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEE-EEc--CCCC
Confidence 45577899999999887778888999999889999988751 111112222223321 333222 221 1111
Q ss_pred C--------CCCcccc----cC--CC-cccc-cchhHHHHHHHHHHHHHHhcccCC-CceEEEEEeccCC
Q 013571 127 M--------VEWEHKS----KN--NG-KMHG-CGHDVHTTILLGAARLLKHRMDRL-KGTVKLVFQPGEE 179 (440)
Q Consensus 127 ~--------~~~~~~~----~~--~g-~i~G-rG~k~~~a~~l~a~~~l~~~~~~~-~~~v~~~~~~dEE 179 (440)
. ....|.+ .+ .| .|.. ..|.+|.|+.+++++++.+.+ + +-+|..+....|=
T Consensus 282 ~~~~iaLVGKGITFDsGG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~--~~~vnv~~vi~~~EN 349 (528)
T 3kr4_A 282 VKKKIALVGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLK--PENVEIHFLSAVCEN 349 (528)
T ss_dssp CCEEEEEEEEEEEEECCTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHC--CSSEEEEEEEEEEEE
T ss_pred CCCcEEEecCceEeecCCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcC--CCCceEEEEEEeecc
Confidence 0 0111221 11 11 1221 223488999999999998774 4 4678777766665
No 77
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=70.37 E-value=0.78 Score=45.22 Aligned_cols=48 Identities=13% Similarity=0.048 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhCCCceee------------------cCCCceEEEEEcCCC---CCEEEEEEecccCC
Q 013571 75 YETSQLVRSELDSLGIEYTW------------------PVAKTGIVASVGSGG---EPWFGLRAEMDALP 123 (440)
Q Consensus 75 ~~~~~~l~~~l~~~G~~~~~------------------~~~~~nv~~~~~~~~---~~~i~~~~H~D~vp 123 (440)
.++.+++.++|++.||+ +. +..+.++++...|+. .+.+++.||+|...
T Consensus 38 ~hav~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dspg 106 (461)
T 2glj_A 38 RECVTELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSPR 106 (461)
T ss_dssp SSTHHHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCCB
T ss_pred HHHHHHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcCC
Confidence 47788999999999997 21 111333888765432 24599999999984
No 78
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=69.93 E-value=14 Score=33.67 Aligned_cols=85 Identities=14% Similarity=0.075 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhhc-CCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCCCCCCch-----H
Q 013571 346 DEKMYEHGKRVGASMV-GEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDAL-----P 418 (440)
Q Consensus 346 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l-----~ 418 (440)
++.+.+.+.+++++.. +.. ........++||...|.+. +|++..+...... .....|++.+.++.-+. .
T Consensus 198 ~~~l~~~l~~~a~~~~~~i~-~~~~~~~~~~sD~~~f~~~GiP~~~~~~~~~~~---~~~~yHt~~Dt~~~~d~~~~~~~ 273 (299)
T 1rtq_A 198 DSNFTQYLTQLMDEYLPSLT-YGFDTCGYACSDHASWHNAGYPAAMPFESKFND---YNPRIHTTQDTLANSDPTGSHAK 273 (299)
T ss_dssp CHHHHHHHHHHHHHHCTTCC-EEEECCSSCCSTHHHHHHTTCCEECEESSCGGG---SCTTTTSTTCCGGGSCTTCHHHH
T ss_pred CchHHHHHHHHHHHhCccCC-cccCCCCCCCCcHHHHHHCCCCEEEeccccccc---CCCCCCCccccccccCccHHHHH
Confidence 4556677777766652 221 1111123367898888777 9986544321110 11348999988765544 7
Q ss_pred HHHHHHHHHHHHHhcc
Q 013571 419 IGAALHAAVAISYLDN 434 (440)
Q Consensus 419 ~~~~~~~~~~~~~~~~ 434 (440)
...+++..++.++...
T Consensus 274 ~~~~l~~~~~~~La~~ 289 (299)
T 1rtq_A 274 KFTQLGLAYAIEMGSA 289 (299)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCC
Confidence 8888999888888654
No 79
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=63.87 E-value=7.2 Score=36.01 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=44.7
Q ss_pred ccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHhccccccc
Q 013571 374 GAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPY---LVVDEDALPIGAALHAAVAISYLDNLEVEV 439 (440)
Q Consensus 374 g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~d---E~i~~~~l~~~~~~~~~~~~~~~~~~~~~~ 439 (440)
+.+|-.-|.+. +|++.+...+.. ...|+++ |+|+.+.+....+++..++.+++.+...++
T Consensus 242 ~~SDH~pF~~~GIP~l~~~~~~~~------~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~~~~P~ 305 (312)
T 4f9u_A 242 VDDDHRPFLDENVPVLHLVATPFP------DVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRHTSPV 305 (312)
T ss_dssp CCCTTHHHHTTTCCEEEEECSSCC------TTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHHCCSCC
T ss_pred CCCchHHHHHCCCCEEEEECCCCC------CCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 45787767776 998765544332 2368887 668889999999999999999998766543
No 80
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=62.20 E-value=13 Score=36.72 Aligned_cols=47 Identities=26% Similarity=0.252 Sum_probs=40.3
Q ss_pred CeEEEEEEEecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHH
Q 013571 271 ARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAV 323 (440)
Q Consensus 271 ~~t~~~~~i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~ 323 (440)
.+++|++.++ .-++++++++++|++++.+.+++.++++++++.....
T Consensus 347 ~~S~n~gv~~------~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~ 393 (490)
T 3mru_A 347 ETSLNVGVIT------TEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQ 393 (490)
T ss_dssp EEEEEEEEEE------EETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCE
T ss_pred eEEEEEEEEE------EeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCe
Confidence 6788888877 3478899999999999999999999999999875433
No 81
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=52.52 E-value=8.5 Score=37.60 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCC---CCCCCCCchHHHHHH
Q 013571 348 KMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSP---YLVVDEDALPIGAAL 423 (440)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~---dE~i~~~~l~~~~~~ 423 (440)
.+++.+.+.++.. |.... .....++||...|.+. +|++.++..+... ....|++ -++|+.+.+....++
T Consensus 350 ~~~~~~~~~~~~~-g~~~~--~~~~~~~SD~~~f~~~GiP~~~l~~~~~~~----~~~yHt~~Dt~d~id~~~l~~~~~~ 422 (444)
T 3iib_A 350 SPVINAMKVAEPL-GVAAG--NNKASGGPDVSMLPALGVPVASLRQDGSDY----FDYHHTPNDTLDKINPEALAQNVAV 422 (444)
T ss_dssp HHHHHHGGGGGGG-TCEEC--CSCCCCCGGGTTSGGGTCCEEEEEECCTTG----GGTTTSTTCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc-CCccc--cCCCCCCCccHHHHHCCCCEEEeecCCCcC----CCCCCCCccccccCCHHHHHHHHHH
Confidence 3444454444433 44221 2345678998878777 9987765542211 1247988 477899999999999
Q ss_pred HHHHHHHHhccc
Q 013571 424 HAAVAISYLDNL 435 (440)
Q Consensus 424 ~~~~~~~~~~~~ 435 (440)
++.++..+....
T Consensus 423 ~~~~v~~lA~~~ 434 (444)
T 3iib_A 423 YAQFAWVMANSK 434 (444)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHhcCC
Confidence 999999987654
No 82
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=48.23 E-value=35 Score=32.86 Aligned_cols=72 Identities=14% Similarity=0.135 Sum_probs=48.6
Q ss_pred HHHHHhhcCCCCcccCCCCcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCCCC---CCCCchHHHHHHHHHHHH
Q 013571 354 KRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLV---VDEDALPIGAALHAAVAI 429 (440)
Q Consensus 354 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~dE~---i~~~~l~~~~~~~~~~~~ 429 (440)
.+..+.+ |.+ . .....++||...|.+. +|++.+...+.. ...|++... ++.+.+....+++..++.
T Consensus 328 ~~~~~~~-~~~-~--~~~~~~~SD~~~F~~~GIP~~~~~~~~~~------~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~ 397 (421)
T 2ek8_A 328 AAASSRL-SGV-L--PYGQEGRSDHESFHALGIPAALFIHAPVE------PWYHTPNDTLDKISKEKLDNVADIVGSAVY 397 (421)
T ss_dssp HHHHHHH-TSC-C--CEEECCSSTHHHHHTTTCCEEEEEEESCC------TTTTSTTCCGGGBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc-CCC-C--CCCCCCCCccHHHHHCCCCEEEEECCcCC------CCCCCcccchhhCCHHHHHHHHHHHHHHHH
Confidence 3444554 654 2 2234567898777777 998753312221 237999877 788999999999999999
Q ss_pred HHhccc
Q 013571 430 SYLDNL 435 (440)
Q Consensus 430 ~~~~~~ 435 (440)
++....
T Consensus 398 ~la~~~ 403 (421)
T 2ek8_A 398 QAARPG 403 (421)
T ss_dssp HHHSSS
T ss_pred HHhCCC
Confidence 887653
No 83
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=44.63 E-value=23 Score=36.71 Aligned_cols=50 Identities=12% Similarity=0.305 Sum_probs=39.9
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhCCCc-eee
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHENPELGF--EEYETSQLVRSELDSLGIE-YTW 94 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~--~e~~~~~~l~~~l~~~G~~-~~~ 94 (440)
...+.+.++. +.+.+.++.|-++|-.++ .+.++++|+++.|++.|++ ++.
T Consensus 15 ~~~~~~~~~~----~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 15 RWKLVSEMKA----ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp HHHHHHHCCH----HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhCCH----HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 5556666664 788889999988887665 5678899999999999998 543
No 84
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=38.34 E-value=95 Score=21.30 Aligned_cols=63 Identities=17% Similarity=0.143 Sum_probs=42.0
Q ss_pred cceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCC---HHHHHHHHHHHHhhcCCCC
Q 013571 290 EIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVND---EKMYEHGKRVGASMVGEPN 365 (440)
Q Consensus 290 ~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~ 365 (440)
+--++++|+|...+...+...+++++.+....+ -.+.++. . ..+| .++..++....+.+ |...
T Consensus 15 dgqeieidirvstgkeleralqelekalaraga---rnvqiti----s-----aendeqakelleliarllqkl-gykd 80 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGA---RNVQITI----S-----AENDEQAKELLELIARLLQKL-GYKD 80 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTC---SEEEEEE----E-----CSSHHHHHHHHHHHHHHHHHH-TCSE
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccc---cceEEEE----E-----ecChHHHHHHHHHHHHHHHHh-CCCc
Confidence 445899999999999999999999988865431 2455544 1 1122 34566666666666 7654
No 85
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=37.66 E-value=30 Score=32.21 Aligned_cols=56 Identities=16% Similarity=0.199 Sum_probs=41.3
Q ss_pred CcccccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHhc
Q 013571 372 EMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPY---LVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 372 ~~g~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~d---E~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
..+.+|-..|.+. +|++.++..+.. ...|++. |+|+.+.+.+..+++..++.++|.
T Consensus 270 ~~~~SDH~pF~~~GIP~~~~~~~~f~------~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Eyl~ 329 (330)
T 3pb6_X 270 GSVEDDHIPFLRRGVPVLHLISTPFP------AVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLG 329 (330)
T ss_dssp CCCSCTTHHHHTTTCCEEEEECSSCC------TTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCchHhHHHCCCCEEEEEcCCCC------CCCCCCcCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 3456886667766 998765433322 2378887 668889999999999999999874
No 86
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=34.86 E-value=87 Score=28.63 Aligned_cols=81 Identities=12% Similarity=0.117 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhhcCCCCcccC-CCCcccccHHHHHH-H-hccceEEE-ccCCCCCCCCCCCCCCC---CCCCCCchHHH
Q 013571 348 KMYEHGKRVGASMVGEPNVHLT-PVEMGAEDFSFYTQ-R-MPAAHFYV-GTRNETLKPFIRLHSPY---LVVDEDALPIG 420 (440)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~-~~~~g~tD~~~~~~-~-~p~v~~~~-G~~~~~~g~~~~~H~~d---E~i~~~~l~~~ 420 (440)
.+.+.+.+.++.+ |....... ......+|-..|.+ . +|++.+.. ++.... +.....|++. |+|+.+.+...
T Consensus 221 ~l~~~~~~~a~~~-g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~~-~~~~~~Ht~~Dt~d~id~~~l~~~ 298 (309)
T 3tc8_A 221 PIVEMVWSAARDL-GYGKYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESKT-GFASYWHTQKDNMENIDRETLKAA 298 (309)
T ss_dssp HHHHHHHHHHHHH-TCTTTEEEEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSSS-SSCTTTTSTTCSGGGBCHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCcceeccCCCCCCCCccHHHHhcCCCCEEEEecccCcccC-CCCCCCCCCcCChhhCCHHHHHHH
Confidence 3556666666655 65321110 11223688777877 6 99875422 110000 1123589999 88999999999
Q ss_pred HHHHHHHHHH
Q 013571 421 AALHAAVAIS 430 (440)
Q Consensus 421 ~~~~~~~~~~ 430 (440)
.++...++.+
T Consensus 299 ~~~~~~~vy~ 308 (309)
T 3tc8_A 299 GQTVLEVIYN 308 (309)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9998888765
No 87
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=32.67 E-value=39 Score=31.35 Aligned_cols=55 Identities=22% Similarity=0.190 Sum_probs=37.7
Q ss_pred cccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHhccc
Q 013571 375 AEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPY---LVVDEDALPIGAALHAAVAISYLDNL 435 (440)
Q Consensus 375 ~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~d---E~i~~~~l~~~~~~~~~~~~~~~~~~ 435 (440)
.+|-.-|.+. +|++.+..-+.. ...|+++ |+|+.+.+....+++..++.+++...
T Consensus 268 ~SDH~pF~~~GIP~l~~i~~~~~------~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~EyL~~~ 326 (330)
T 4fai_A 268 EDDHIPFLRRNVPILHLIPVPFP------SVWHTPDDNASVIDYATTDNLALIIRLFALEYLLAG 326 (330)
T ss_dssp CSTTHHHHTTTCCEEEECCSSCC------TTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCchHHHHHCCCCEEEEECCCCC------CCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 4676666666 998754322211 2368887 56778888999999999998887643
No 88
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=31.72 E-value=1e+02 Score=30.26 Aligned_cols=68 Identities=18% Similarity=0.101 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCcee-e------c--------CCCceEEEE-EcCC--CC-CEEEE
Q 013571 55 EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYT-W------P--------VAKTGIVAS-VGSG--GE-PWFGL 115 (440)
Q Consensus 55 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~-~------~--------~~~~nv~~~-~~~~--~~-~~i~~ 115 (440)
+++.+..++++.+-.-|.-+.++.++++++|++.||.-- + . .++.+++|. +++. .+ .--++
T Consensus 33 ~~~~~~a~~~~~Fl~~spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~iv 112 (496)
T 3vat_A 33 EAVQAAARELLKFVNRSPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLI 112 (496)
T ss_dssp HHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEE
Confidence 444455555666555566788999999999999999631 1 0 122346665 4443 12 45688
Q ss_pred EEecccC
Q 013571 116 RAEMDAL 122 (440)
Q Consensus 116 ~~H~D~v 122 (440)
.+|.|.=
T Consensus 113 gaHtDSP 119 (496)
T 3vat_A 113 GAHTDSP 119 (496)
T ss_dssp EEECCCC
T ss_pred EEeccCC
Confidence 9999973
No 89
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=28.71 E-value=47 Score=30.66 Aligned_cols=53 Identities=17% Similarity=0.222 Sum_probs=38.4
Q ss_pred cccHHHHHHH-hccceEEEccCCCCCCCCCCCCCCC---CCCCCCchHHHHHHHHHHHHHHhc
Q 013571 375 AEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPY---LVVDEDALPIGAALHAAVAISYLD 433 (440)
Q Consensus 375 ~tD~~~~~~~-~p~v~~~~G~~~~~~g~~~~~H~~d---E~i~~~~l~~~~~~~~~~~~~~~~ 433 (440)
.+|-.-|.+. +|++.+..++.. ...|++. ++++.+.+....+++..++.+++.
T Consensus 272 ~sDh~~F~~~GiP~~~~~~~~~~------~~yHt~~Dt~~~ld~~~l~~~~~~~~~~v~eyl~ 328 (329)
T 2afw_A 272 QDDHIPFLRRGVPVLHLIPSPFP------EVWHTMDDNEENLDESTIDNLNKILQVFVLEYLH 328 (329)
T ss_dssp CSTTHHHHTTTCCEEEECCSSCC------TTTTSTTCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHhHHHCCCCEEEEEcCCCC------CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 4786667666 998765544322 2378886 557778889999999999988874
No 90
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=27.77 E-value=28 Score=35.61 Aligned_cols=48 Identities=8% Similarity=0.100 Sum_probs=32.9
Q ss_pred hHHHHHhcCCcchHHHHHHHHHHHHh-----CCCCCcchHHHHHHHHHHHHhCCCce
Q 013571 41 TRELLDSAREPEFFEWMRRIRRRIHE-----NPELGFEEYETSQLVRSELDSLGIEY 92 (440)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~-----~ps~s~~e~~~~~~l~~~l~~~G~~~ 92 (440)
...+.+.++. +.+.+.++.|-+ +.+.|..+.++++||.+.|++.|++.
T Consensus 8 ~~~l~~~i~~----~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 8 KRKLSEKLDS----TDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp HHHHHHHHHT----CCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHhCCH----HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 4555555555 334455555544 34556678899999999999999973
No 91
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=24.30 E-value=1.3e+02 Score=30.21 Aligned_cols=60 Identities=8% Similarity=0.004 Sum_probs=37.3
Q ss_pred HHHhCCCCCcchHHHHHHHHHHHHhCCCcee-e------c--------CCCceEEEEE-cCC--CC-C-EEEEEEecccC
Q 013571 63 RIHENPELGFEEYETSQLVRSELDSLGIEYT-W------P--------VAKTGIVASV-GSG--GE-P-WFGLRAEMDAL 122 (440)
Q Consensus 63 ~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~-~------~--------~~~~nv~~~~-~~~--~~-~-~i~~~~H~D~v 122 (440)
+++.+-.-+.-+..+.++++++|++.||.-- + . ..+.+++|.. +.. ++ . --++.+|.|.=
T Consensus 12 ~~~~Fl~~spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP 91 (571)
T 4eme_A 12 DALKFIQRSGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSC 91 (571)
T ss_dssp HHHHHHHHCCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCC
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCC
Confidence 3333333345568999999999999999531 1 0 1133466654 433 22 3 56889999974
Done!