Query 013574
Match_columns 440
No_of_seqs 130 out of 1403
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 13:08:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013574.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013574hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1c96_A Mitochondrial aconitase 100.0 9.7E-99 3E-103 819.5 30.2 341 66-423 32-406 (753)
2 2b3y_A Iron-responsive element 100.0 7.2E-92 2.5E-96 773.4 19.1 357 66-423 49-488 (888)
3 1l5j_A Aconitate hydratase 2; 100.0 3.6E-89 1.2E-93 748.7 32.7 345 54-423 367-755 (865)
4 1pqh_A Aspartate 1-decarboxyla 47.1 2.1 7.1E-05 38.0 -1.8 34 374-411 39-81 (143)
5 3oug_A Aspartate 1-decarboxyla 45.8 1.8 6.1E-05 37.1 -2.4 34 374-411 25-67 (114)
6 2c45_A Aspartate 1-decarboxyla 38.3 2.3 7.8E-05 37.6 -3.0 33 374-410 22-63 (139)
7 1usm_A DCOH, hepatocyte nuclea 20.4 1E+02 0.0035 24.0 4.0 40 221-260 33-72 (80)
8 1zco_A 2-dehydro-3-deoxyphosph 17.9 50 0.0017 31.5 2.0 41 347-391 88-128 (262)
9 3jst_A Putative pterin-4-alpha 17.6 1.1E+02 0.0036 24.9 3.6 40 220-259 50-89 (97)
10 2ebb_A Pterin-4-alpha-carbinol 16.4 1.4E+02 0.0046 24.5 4.0 39 221-259 47-85 (101)
No 1
>1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A
Probab=100.00 E-value=9.7e-99 Score=819.49 Aligned_cols=341 Identities=25% Similarity=0.328 Sum_probs=315.0
Q ss_pred CCCCcHHHHHHHHhcCCCC---C-CCCCeEEEeeeEEEecCCChHHHHHHHHHHhCCCCcccCCccEEEEecCCCCCC--
Q 013574 66 KNAMTLTEKIFSRASEKPQ---L-SPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTS-- 139 (440)
Q Consensus 66 ~~~mTl~EKIla~~~~~~~---v-~~Gd~v~v~vD~v~~hD~tgp~~~~~~~~e~G~~~~v~dp~kvv~~~DH~vp~~-- 139 (440)
++||||+||||++|++... + ++||++.+++|++++||+|+|+++..|+. +|. .++|+|+++ ++||++|+.
T Consensus 32 ~~~~Tl~eKIl~~H~~~~~~~~~~~~g~~i~~~~drvl~hD~T~~~a~~~l~~-~G~-~~v~~P~~~--~~DH~v~~~~~ 107 (753)
T 1c96_A 32 NRPLTLSEKIVYGHLDDPANQEIERGKTYLRLRPDRVAMQDATAQMAMLQFIS-SGL-PKVAVPSTI--HCDHLIEAQLG 107 (753)
T ss_dssp CSCCCHHHHHHHTTBSCTTTCCCCTTTCEEEECCSEEEEETTTHHHHHHHHHH-HTC-SSCSSCEEE--ECCSSCCBSSC
T ss_pred CCCCCHHHHHHHHHhCCcccccccCCCCEEEEEccEEEEeccccHHHHHHHHH-hCC-CCCCCCCce--ecCCCCCCCCC
Confidence 4689999999999998752 3 67899999999999999999999999964 774 679999984 689999987
Q ss_pred ---C-----HHHHHHHHHHHHHHHHcCcceeeecccCCCcccCCCCCeeeeeeecccceecCCceEEecCCCCccCCccc
Q 013574 140 ---D-----ERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211 (440)
Q Consensus 140 ---~-----~~~~~~~~~lr~fak~~gi~~f~d~~~~~~~~~~ppg~GI~Hqvl~eeg~~~PG~~ivGtDSHT~t~GAlG 211 (440)
+ .++.+.+++||+||+++|+. || |||+|||||++.|. +++||+++|||||||||+||||
T Consensus 108 ~~~d~~~~~~~n~e~~~~l~~~a~~~gi~-~~-----------~pg~GI~Hqv~~E~-~~~Pg~~ivGtDSHT~t~GalG 174 (753)
T 1c96_A 108 GEKDLRRAKDINQEVYNFLATAGAKYGVG-FW-----------RPGSGIIHQIILEN-YAYPGVLLIGTDSHTPNGGGLG 174 (753)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHTCE-EE-----------CTTSBCHHHHHHHH-TCCTTCEEEESSTTGGGGGGGT
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHCCCE-EE-----------CCCCCeeCeEeccc-ccCCCcEEecCCCCCCccchhh
Confidence 2 34557799999999999995 55 46799999998875 9999999999999999999999
Q ss_pred ceeccCCchhhhhhhccceEEeecCCceeEEEEeeCCCCccHhHHHHHHHHHhcccccCceEEEEecCcccCCChhhhhh
Q 013574 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMT 291 (440)
Q Consensus 212 ala~GvG~td~a~~l~tG~~wlkvPetv~V~L~G~L~~gV~aKDviL~li~~l~~~G~~gk~vEF~G~gv~~LS~deR~T 291 (440)
+||||||++|++.+|+++++||++||+|+|+|+|+|++||++|||||+|+++|+++|++|++|||+|+||++||+++|||
T Consensus 175 ~la~GvG~~e~~~vmagq~~~~~~P~vv~V~l~G~L~~gVtakDviL~ii~~l~~~G~~g~~vEf~G~gv~~LS~~~R~T 254 (753)
T 1c96_A 175 GICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMAT 254 (753)
T ss_dssp CEEEECCHHHHHHHHHTCCEEEECCEEEEEEEESCCCTTCCHHHHHHHHHHHHTTTTTTTEEEEEESGGGGGSCHHHHHH
T ss_pred hheeccCHHHHHHHHhCCeeeccCCcEEEEEEeeecCCCccHHHHHHHHHHHhccCCcceEEEEEECCccccCCcchhhh
Confidence 99999999999999997777799999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccCceeeeccCchhHHHHhhhcCCC--------CCccccCCCCCcccEEEEEeCCCcceeeecCCCCCCccccc
Q 013574 292 LCNMVVEAGGKNGVVPADGTTFKYLEDKTSL--------PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363 (440)
Q Consensus 292 l~NM~~E~GAk~gif~pD~~t~~yL~~~~~~--------~~~~l~~D~dA~Y~~~i~iDLs~LeP~VA~P~sPdnv~~v~ 363 (440)
||||++|+||++|+||+|++|++||+.+++. .|+.+++|+||.|+++++||||+|||+||+|++|+|+.|++
T Consensus 255 I~NMa~E~GA~~gifp~De~T~~YL~~~gr~~~~~~~~~y~~~l~~D~~A~Yd~~ieiDls~leP~va~P~~P~~~~~v~ 334 (753)
T 1c96_A 255 ICNMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADEFKDHLVPDPGCHYDQVIEINLSELKPHINGPFTPDLAHPVA 334 (753)
T ss_dssp HHHHGGGGTCSEEECCCCHHHHHHHHHTTCHHHHHHHHHTGGGSSCCTTCCCSEEEEEEGGGCCCEEECSSSTTCEEEHH
T ss_pred hhccchhhCcccccccCcHHHHHHHHhcCCcHHHHHHHHHHhhccCCCCCceeEEEEEEccccceeecCCCCCcceeEhH
Confidence 9999999999999999999999999999872 23678899999999999999999999999999999999999
Q ss_pred ccccc--------eeceEEEecCCCCChHHHHHHHHHHHh---cCCcceecEEEECccH-HHHHHhhccccc
Q 013574 364 ECKDV--------KIDRVYIGSCTGGKTEDFLAAAKVFLA---SVRAISIITFFRQPIE-SYKNLLHPSLNE 423 (440)
Q Consensus 364 e~~g~--------kId~v~IGSCTngr~eDL~~AA~vL~~---~G~kv~Vr~~V~PaS~-V~~~~l~~G~~~ 423 (440)
|+.+. +||+||||||||||+|||++||+|||+ +|.+.+|+++|+|+|+ |+++|+++|+.+
T Consensus 335 e~~~~~~~~~~~~~Vd~~~IGSCTN~~~~Dl~~AA~ilkga~~~~v~~~V~~~v~PgS~~V~~~~~~~Gl~~ 406 (753)
T 1c96_A 335 EVGSVAEKEGWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQ 406 (753)
T ss_dssp HHHHHHHHHTCCCBEEEEEEBTTTBCSHHHHHHHHHHHHHHHTTTCCCSSEEEECCSBHHHHHHHHHTTHHH
T ss_pred HhhhhHhhcCCccceEEEEEecCCCCCHHHHHHHHHHhccHhhcCCCCCceEEEeCCCHHHHHHHHHcCcHH
Confidence 99988 999999999999999999999999995 4555569999999999 999999999865
No 2
>2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A
Probab=100.00 E-value=7.2e-92 Score=773.44 Aligned_cols=357 Identities=19% Similarity=0.268 Sum_probs=316.4
Q ss_pred CCCCcHHHHHHHHhcCC-CCCCCCCeEEEeeeEEEecCCChHHHHHHHHHH------hCCCCcccCCc-cEEEEecCCCC
Q 013574 66 KNAMTLTEKIFSRASEK-PQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKE------FGENAKVWDRE-KIVIIPDHYIF 137 (440)
Q Consensus 66 ~~~mTl~EKIla~~~~~-~~v~~Gd~v~v~vD~v~~hD~tgp~~~~~~~~e------~G~~~~v~dp~-kvv~~~DH~vp 137 (440)
..|+|++||++.++++- +..++|+++.++||++++||+|||+++..|+.. +|.++...+|. ++.+++||++|
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~pdrvl~qD~Tg~~a~~~l~~mr~a~~~~g~d~~ki~p~~pv~lv~DH~v~ 128 (888)
T 2b3y_A 49 CDEFLVKKQDIENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQ 128 (888)
T ss_dssp CCSSSSCHHHHHHHHTHHHHTTTTCEEEECCSEEEEEHHHHHHHHHHHHHHHHHHHHTTCCGGGSSCSSCEEEECCSSCC
T ss_pred cCCcchhHHHHHHHhcccccCCCCCEEEEeccEEEEEccccHHHHHHHHHHHHHHHhcCCChhhcCCCCCeeEEeCCCCC
Confidence 35899999999998863 335799999999999999999999999987531 25444445666 37899999999
Q ss_pred CCCHH--HHHHHHHHHHHHHHcCccee--eecccCCCcccCCCCCeeeeeeecc---------cceecCCceEEecCCCC
Q 013574 138 TSDER--ANRNVDILRDFCMEQNIKYF--YDIKDLGNFKANPDYKGVCHIALAQ---------EGHCRPGEVLLGTDSHT 204 (440)
Q Consensus 138 ~~~~~--~~~~~~~lr~fak~~gi~~f--~d~~~~~~~~~~ppg~GI~Hqvl~e---------eg~~~PG~~ivGtDSHT 204 (440)
+.+.. .+..++.+++|.|+.+++.| |....+.||++.|||+|||||++.| +|+++|| ++|||||||
T Consensus 129 ~~~~~~~da~~~n~~~e~~rN~e~~~fL~w~~~~f~~~~~~~pG~GI~Hqv~lE~la~~v~~~~G~~~P~-tlVGtDSHT 207 (888)
T 2b3y_A 129 VDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPD-SLVGTDSHT 207 (888)
T ss_dssp CSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECTTSCCHHHHHHHTTCCSEEEETTEEEEC-EEEESSGGG
T ss_pred cCCccccCHHHHHHHHHHHHhcchHHHHHHHHHhccCCCCCCCCCCCcceehhhhccccccccCcccccC-eEEecCCCc
Confidence 87633 45566778888888887655 5555567888999999999999888 8999996 889999999
Q ss_pred ccCCcccceeccCCchhhhhhhccceEEeecCCceeEEEEeeCCCCccHhHHHHHHHHHhcccccCceEEEEecCcccCC
Q 013574 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERL 284 (440)
Q Consensus 205 ~t~GAlGala~GvG~td~a~~l~tG~~wlkvPetv~V~L~G~L~~gV~aKDviL~li~~l~~~G~~gk~vEF~G~gv~~L 284 (440)
||+||||+||||||++|++++|+||++||++||+|+|+|+|+|++||++|||||+|+++|+++|++|++|||+|+|+++|
T Consensus 208 ~t~GglG~la~GVGg~eae~~mag~~~~~~~PevvgV~ltG~L~~gVtakDviL~i~~~l~~~G~vGk~vEF~G~gv~~L 287 (888)
T 2b3y_A 208 TMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQL 287 (888)
T ss_dssp GGGGGGTCEEEECCHHHHHHHHTTCCEEEECCCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHCCTTCEEEEESGGGTTS
T ss_pred cccCcceeEEEccCHHHHHHHHhcCcEeecCCCEEEEEEEccCCCCcchhHHHHHHHHHhccCCccceEEEEecCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhhhhhccccCceeeeccCchhHHHHhhhcCCCC--------C-------ccccCC-CCCcccEEEEEeCCCcce
Q 013574 285 SMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------Y-------EPVYSD-EKASFLSEYRFDISKLEP 348 (440)
Q Consensus 285 S~deR~Tl~NM~~E~GAk~gif~pD~~t~~yL~~~~~~~--------~-------~~l~~D-~dA~Y~~~i~iDLs~LeP 348 (440)
|+++|||||||++|+||++|+||+|++|++||+.+++.+ | +.+.+| +||.|+++++||||+|||
T Consensus 288 S~~~R~TI~NMa~E~GAt~g~fp~De~T~~YL~~~gr~~~~~~~~e~y~~a~~l~~~l~~d~~dA~Yd~~ieiDLs~leP 367 (888)
T 2b3y_A 288 SIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVELDLKTVVP 367 (888)
T ss_dssp CHHHHHHHHHTHHHHTCSEEECCCCHHHHHHHHHTTCCHHHHHHHHHHHHHHTCCCCTTCGGGCCCCSEEEEEEGGGCCS
T ss_pred cccchhhhhhcchhhCCeeEEecCcHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhccCCCCCCCceEEEEEEEhhheeE
Confidence 999999999999999999999999999999999988743 2 122246 999999999999999999
Q ss_pred eeecCCCCCCcccccccc--------------cc-------------------------eeceEEEecCCCCChHHHHHH
Q 013574 349 LVAKPHSPDNRALARECK--------------DV-------------------------KIDRVYIGSCTGGKTEDFLAA 389 (440)
Q Consensus 349 ~VA~P~sPdnv~~v~e~~--------------g~-------------------------kId~v~IGSCTngr~eDL~~A 389 (440)
+||+|++|+|+.|++|+. |. +||+||||||||+|+||+++|
T Consensus 368 ~VAgP~~P~~~~plse~~~~~~~~l~~~~g~~g~~~~~~~~~~~~~~~~~g~~~~l~~g~V~~a~IgSCTN~s~~dl~~a 447 (888)
T 2b3y_A 368 CCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLG 447 (888)
T ss_dssp EEECSSCTTCEEEGGGHHHHHHHHHHSCSBTTBCCCCGGGTTCEEEEEETTEEEEEETTBEEEEEECCHHHHTCHHHHHH
T ss_pred eecCCCCcccccChHHhhhhHHHhhhcccccccccccchhhcccceeecCCccccccCCcEEEEEEecCCCCCcHHHHHH
Confidence 999999999999998764 11 488999999999999999999
Q ss_pred HHHHHh----cCCcce--ecEEEECccH-HHHHHhhccccc
Q 013574 390 AKVFLA----SVRAIS--IITFFRQPIE-SYKNLLHPSLNE 423 (440)
Q Consensus 390 A~vL~~----~G~kv~--Vr~~V~PaS~-V~~~~l~~G~~~ 423 (440)
|++|.+ +|+||+ |+++|+|||+ |++++.++|+++
T Consensus 448 A~lLak~A~~kG~kv~p~Vk~~v~PGS~~V~~~l~~~Gl~~ 488 (888)
T 2b3y_A 448 AGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMP 488 (888)
T ss_dssp HHHHHHHHHHTTCCCCTTSEEEECCSSHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHhcCCCCCCCceEEEeCCCHHHHHHHHHcCcHH
Confidence 999932 599997 9999999999 999999999875
No 3
>1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1
Probab=100.00 E-value=3.6e-89 Score=748.69 Aligned_cols=345 Identities=20% Similarity=0.265 Sum_probs=312.5
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCeEEEeeeEEEecCCChHHHHHHHHHHhCCCCcccCCccEEEEec
Q 013574 54 QSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPD 133 (440)
Q Consensus 54 ~~~r~~~~~~~~~~~mTl~EKIla~~~~~~~v~~Gd~v~v~vD~v~~hD~tgp~~~~~~~~e~G~~~~v~dp~kvv~~~D 133 (440)
.--+.|..+...+|||||+||||++|+|.+.|+|||+|++++|+|++||+|||++.+.|++ +| ..+|+|++++.++|
T Consensus 367 ~~f~~~~~~~~~~mg~TlaEKIl~~~~g~~~v~~G~~v~~~~D~v~~qD~Tg~~~~~~~~~-lg--~~~~~~d~vv~~~d 443 (865)
T 1l5j_A 367 DVFRQAKDVAESDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKD-LA--CLGFSADLVMQSFC 443 (865)
T ss_dssp CSSCCCCCCCCCCSCCCHHHHHHHHTTTSSCCCTTCEECCBCSEEEECTTTHHHHHHHHHH-TT--CCSCCSSCEEECCC
T ss_pred hhccCCCCCCCCCCCccHHHHHHHHHhCCCccCCCCEEEEEeeEEEEeccCcHHHHHHHHH-cC--CCcCCCCeEEEECC
Confidence 3445566655567999999999999999888999999999999999999999999999964 77 46899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCcceeeecccCCCcccCCCCCeeeeeeecccceecCCceEEecCCCCccCCcccce
Q 013574 134 HYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQF 213 (440)
Q Consensus 134 H~vp~~~~~~~~~~~~lr~fak~~gi~~f~d~~~~~~~~~~ppg~GI~Hqvl~eeg~~~PG~~ivGtDSHT~t~GAlGal 213 (440)
|+++..+....+.++.+++|++++|+. || |||+|||||++. +++.||+++||+|||||++|+ +
T Consensus 444 h~~~~~~~~~~e~~~~~~~Fa~~~g~~-~~-----------~pg~GI~Hq~l~--~~~~PG~~ivGtDSHT~~~~G---l 506 (865)
T 1l5j_A 444 HTAAYPKPVDVNTHHTLPDFIMNRGGV-SL-----------RPGDGVIHSWLN--RMLLPDTVGTGGDSHTRFPIG---I 506 (865)
T ss_dssp SSSSSCCHHHHHHHHHHHHHHHTTTCE-EC-----------CTTSBCHHHHHG--GGCCTTCEEEESSTTCCCSSS---E
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHcCCe-Ee-----------CCCCceeeeeec--ccccccceEEeCCCCcccccc---c
Confidence 999999999999999999999999984 44 578999999875 399999999999999999995 5
Q ss_pred eccCCchhhhhhhccceEEeecCCceeEEEEeeCCCCccHhHHHHHHH------HHhcc------cccCceEEEEecCcc
Q 013574 214 ATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQII------GEISV------AGATYKSMEFVGTTV 281 (440)
Q Consensus 214 a~GvG~td~a~~l~tG~~wlkvPetv~V~L~G~L~~gV~aKDviL~li------~~l~~------~G~~gk~vEF~G~gv 281 (440)
|+|.|++|+|.+|+||++|+++||+|+|+|+|+|++||++|||||+|+ +.|++ +|++|++||| +|+
T Consensus 507 g~g~G~g~vA~a~atG~~~~~vPevv~V~l~G~L~~gVtaKDvIL~i~~~~i~~G~l~v~k~g~~~~~~G~~vEf--~Gv 584 (865)
T 1l5j_A 507 SFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEI--EGL 584 (865)
T ss_dssp ECCCCHHHHHHHHHHSBCCEECCCEEEEEEESCCCTTCCHHHHHHHHHHHHHHTTSBCSCSTTCCBTTTTSEEEE--ESC
T ss_pred eeCccHHHHHHHHHcCceeecCCCEEEEEEEeeCCCCCChHHHHHHHHHHHHhcccccccccCcccceeeEEEEE--ccc
Confidence 678899999999999999999999999999999999999999999995 44444 5668999999 479
Q ss_pred cCCChhhhhhhhhhccccCceeeeccCc-hhHHHHhhh----------cCCC-------------C----CccccCCCCC
Q 013574 282 ERLSMEERMTLCNMVVEAGGKNGVVPAD-GTTFKYLED----------KTSL-------------P----YEPVYSDEKA 333 (440)
Q Consensus 282 ~~LS~deR~Tl~NM~~E~GAk~gif~pD-~~t~~yL~~----------~~~~-------------~----~~~l~~D~dA 333 (440)
++||+++|||||||++|+||++|+||+| ++|++||+. +++. + +..+++|+||
T Consensus 585 ~~LS~~~R~TI~NMa~E~GA~~g~f~~dDe~t~~YL~~~~~~~~~m~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~D~dA 664 (865)
T 1l5j_A 585 PDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADA 664 (865)
T ss_dssp TTCCHHHHHHHHHGGGTTTCSEEEECCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHSCCCCCCCTTC
T ss_pred ccCChhhhhhHhhcchhcCCeeEEEeCCHHHHHHHHHhhhhhhhhhhccCCccchhHHHHHHHHHHHHhccceeccCCCC
Confidence 9999999999999999999999999966 788999998 3431 1 2348899999
Q ss_pred cccEEEEEeCCCc-ceeeecCCCCCCcccccccccceeceEEEecCCCCChHHHHHHHHHHHhcCCcce--ecEEEECcc
Q 013574 334 SFLSEYRFDISKL-EPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASVRAIS--IITFFRQPI 410 (440)
Q Consensus 334 ~Y~~~i~iDLs~L-eP~VA~P~sPdnv~~v~e~~g~kId~v~IGSCTngr~eDL~~AA~vL~~~G~kv~--Vr~~V~PaS 410 (440)
.|+++++||||+| ||+||+|++|||+.|++|+++++||+||||||||+ +|||++||+||| |++++ |+++|+|+|
T Consensus 665 ~Y~~~ieiDLs~l~eP~VA~P~~Pd~~~~vse~~~~~Id~v~IGSCTtn-~eDl~~AA~ilk--g~~v~~~v~~~V~PgS 741 (865)
T 1l5j_A 665 EYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQGEKIDEVFIGSCMTN-IGHFRAAGKLLD--AHKGQLPTRLWVAPPT 741 (865)
T ss_dssp CCSEEEEEEGGGCCSCEEECTTCTTCEEEGGGTTTCBCCEEEECSTTCC-HHHHHHHHHHHH--HSCSCCSSEEEECCSB
T ss_pred cEEEEEEEEcccCCCCEecCCCChHhccchhhhcccccceEEEecCCCC-HHHHHHHHHHHc--CcccCCCCCEEEECCC
Confidence 9999999999999 89999999999999999999999999999999888 999999999999 66665 999999999
Q ss_pred H-HHHHHhhccccc
Q 013574 411 E-SYKNLLHPSLNE 423 (440)
Q Consensus 411 ~-V~~~~l~~G~~~ 423 (440)
+ |+++++++|+.+
T Consensus 742 ~~V~~~l~~eGl~~ 755 (865)
T 1l5j_A 742 RMDAAQLTEEGYYS 755 (865)
T ss_dssp HHHHHHHHHTTHHH
T ss_pred HHHHHHHHHcCcHH
Confidence 9 999999999865
No 4
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=47.08 E-value=2.1 Score=38.05 Aligned_cols=34 Identities=32% Similarity=0.481 Sum_probs=28.2
Q ss_pred EEecCCCCChHHHHHHHHHHHhcCCcce---------ecEEEECccH
Q 013574 374 YIGSCTGGKTEDFLAAAKVFLASVRAIS---------IITFFRQPIE 411 (440)
Q Consensus 374 ~IGSCTngr~eDL~~AA~vL~~~G~kv~---------Vr~~V~PaS~ 411 (440)
|.||||=- +||+.||.||. +.||. ..++++||-+
T Consensus 39 Y~GSITID--~dLldaAgIl~--~EkV~IvNvnNG~RfeTYvI~Ger 81 (143)
T 1pqh_A 39 YEGTCAID--QDFLDAAGILE--NEAIDIWNVTNGKRFSTYAIAAER 81 (143)
T ss_dssp SCCCEEEE--HHHHHHHTCCT--TCEEEEEETTTCCEEEEEEEEECT
T ss_pred cceeEEEC--HHHHHHcCCCC--CCEEEEEECCCCceEEEEEEEccC
Confidence 88999986 89999999999 88874 4578887643
No 5
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=45.76 E-value=1.8 Score=37.12 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=27.1
Q ss_pred EEecCCCCChHHHHHHHHHHHhcCCcce---------ecEEEECccH
Q 013574 374 YIGSCTGGKTEDFLAAAKVFLASVRAIS---------IITFFRQPIE 411 (440)
Q Consensus 374 ~IGSCTngr~eDL~~AA~vL~~~G~kv~---------Vr~~V~PaS~ 411 (440)
|.||||=- +||+.||.||. +.||. ..++++||-+
T Consensus 25 Y~GSitID--~~Ll~aA~i~~--~E~V~I~NvnNG~Rf~TYvI~Ger 67 (114)
T 3oug_A 25 YVGSITID--SEIMKQANIIE--NEKVQVVNLNNGERLETYVIKGEP 67 (114)
T ss_dssp CC-CEEEE--HHHHHHTTCCT--TBEEEEEETTTCCEEEEEEEEECT
T ss_pred ccceEEEC--HHHHHHcCCCc--CCEEEEEECCCCceEEEEEEEccC
Confidence 88999987 89999999999 88874 4578887743
No 6
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=38.26 E-value=2.3 Score=37.64 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=27.4
Q ss_pred EEecCCCCChHHHHHHHHHHHhcCCcce---------ecEEEECcc
Q 013574 374 YIGSCTGGKTEDFLAAAKVFLASVRAIS---------IITFFRQPI 410 (440)
Q Consensus 374 ~IGSCTngr~eDL~~AA~vL~~~G~kv~---------Vr~~V~PaS 410 (440)
|.||||=- +||+.||.||. +.||. ..++++||-
T Consensus 22 Y~GSITID--~dLldaAgIl~--~EkV~IvNvnNG~RfeTYvI~Ge 63 (139)
T 2c45_A 22 YVGSVTID--ADLMDAADLLE--GEQVTIVDIDNGARLVTYAITGE 63 (139)
T ss_dssp SCCEEEEE--HHHHHHTTCCS--SCCEEEEETTTCCEEEECEEEEC
T ss_pred cceeeEEC--HHHHHHcCCCC--CCEEEEEECCCCceEEEEEEEcc
Confidence 88999987 89999999999 88874 457777764
No 7
>1usm_A DCOH, hepatocyte nuclear factor 1-alpha; transcriptional stimulator, dimerization cofactor, dehydratase, 4A-carbinolamine dehydratase; 1.2A {Thermus thermophilus} SCOP: d.74.1.1 PDB: 1uso_A
Probab=20.36 E-value=1e+02 Score=24.02 Aligned_cols=40 Identities=8% Similarity=-0.242 Sum_probs=32.7
Q ss_pred hhhhhhccceEEeecCCceeEEEEeeCCCCccHhHHHHHH
Q 013574 221 DAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQI 260 (440)
Q Consensus 221 d~a~~l~tG~~wlkvPetv~V~L~G~L~~gV~aKDviL~l 260 (440)
+++..+---+-|.-....|.|+|.-.=..|++.+|++|+-
T Consensus 33 ~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlt~~D~~lA~ 72 (80)
T 1usm_A 33 ALAERENHHPRLTVEWGRVTVEWWTHSAGGVTEKDREMAR 72 (80)
T ss_dssp HHHHHHTCCCEEEEETTEEEEEECBTTTTBCCHHHHHHHH
T ss_pred HHHHHhCCCCcEEEeCCEEEEEEEeCCCCCCCHHHHHHHH
Confidence 4555566677888889999999988778899999999873
No 8
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=17.92 E-value=50 Score=31.52 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=30.6
Q ss_pred ceeeecCCCCCCcccccccccceeceEEEecCCCCChHHHHHHHH
Q 013574 347 EPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAK 391 (440)
Q Consensus 347 eP~VA~P~sPdnv~~v~e~~g~kId~v~IGSCTngr~eDL~~AA~ 391 (440)
-|.++-|++|..+..+.+ . +|..-|||.+....+=|+++|+
T Consensus 88 l~~~te~~d~~~~~~l~~---~-vd~~kIga~~~~n~~ll~~~a~ 128 (262)
T 1zco_A 88 LVTVTEVMDTRHVELVAK---Y-SDILQIGARNSQNFELLKEVGK 128 (262)
T ss_dssp CEEEEECCCGGGHHHHHH---H-CSEEEECGGGTTCHHHHHHHTT
T ss_pred CcEEEeeCCHHhHHHHHh---h-CCEEEECcccccCHHHHHHHHh
Confidence 478888888888766655 4 7888888888776655666665
No 9
>3jst_A Putative pterin-4-alpha-carbinolamine dehydratase; lyase, structural genomics, seattle structural genomics CENT infectious disease, ssgcid; 2.10A {Brucella melitensis} SCOP: d.74.1.0
Probab=17.57 E-value=1.1e+02 Score=24.89 Aligned_cols=40 Identities=8% Similarity=-0.043 Sum_probs=34.3
Q ss_pred hhhhhhhccceEEeecCCceeEEEEeeCCCCccHhHHHHH
Q 013574 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (440)
Q Consensus 220 td~a~~l~tG~~wlkvPetv~V~L~G~L~~gV~aKDviL~ 259 (440)
.+++..+.--+-|.-....|.|+|+=.=..|++.+|++|+
T Consensus 50 a~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlT~~D~~lA 89 (97)
T 3jst_A 50 ALYAEKLDHHPEWFNAYNRVDVTLATHSENGVTELDIKMA 89 (97)
T ss_dssp HHHHHHHTCCCEEEEETTEEEEEECBGGGTBCCHHHHHHH
T ss_pred HHHHHHhCCCCeEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 3566667777888899999999998888889999999987
No 10
>2ebb_A Pterin-4-alpha-carbinolamine dehydratase; coenzyme biosyntheses, GK1984, structural genomics, NPPSFA; 1.60A {Geobacillus kaustophilus}
Probab=16.35 E-value=1.4e+02 Score=24.48 Aligned_cols=39 Identities=10% Similarity=-0.129 Sum_probs=33.4
Q ss_pred hhhhhhccceEEeecCCceeEEEEeeCCCCccHhHHHHH
Q 013574 221 DAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (440)
Q Consensus 221 d~a~~l~tG~~wlkvPetv~V~L~G~L~~gV~aKDviL~ 259 (440)
+++-.+---+-|.-....|.|+|.-.=..|++.+|++|+
T Consensus 47 ~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlt~~D~~lA 85 (101)
T 2ebb_A 47 AISENANHHPFISIDYKLITVKLSSWRAKGLTKLDFDLA 85 (101)
T ss_dssp HHHHHTTCCCEEEEETTEEEEEECBTTTTBCCHHHHHHH
T ss_pred HHHHHhCCCCcEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 556666677888889999999998877889999999997
Done!