BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 013577
         (440 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q28EH9|T194A_XENTR Transmembrane protein 194A OS=Xenopus tropicalis GN=tmem194a PE=2
           SV=1
          Length = 431

 Score = 35.0 bits (79), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 273 LVRKHGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPPCAAFVEIMA 332
           L RK  L+  +P   P + LT +  +++GD E  K  EE  G+CS+P          I +
Sbjct: 315 LYRKIKLKRGKPS--PPRLLTEEEYRKQGDVETRKALEELRGYCSSPDFAAWKTVSRIQS 372

Query: 333 PVFSRDAWRCVWHMIQNDL-VH----GWGLDF 359
           P    D      H+  N++ VH    G+G  F
Sbjct: 373 PKRFADFVEGSSHLTPNEVSVHEHEYGFGGSF 404


>sp|Q32M07|KAD8_MOUSE Adenylate kinase 8 OS=Mus musculus GN=Ak8 PE=2 SV=1
          Length = 479

 Score = 33.1 bits (74), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 117 GAERLPPKIVRAESDFYLRRLWGNPNED-LTSQPKYLVTFTVGYDQKNNINAAIKKVGFC 175
              R+PP++ +   D+Y+  +  N  E  L  QP+  ++F + + ++NN N  + KV   
Sbjct: 6   APHRIPPEMPQYGEDYYIFEMMQNMLEQLLIHQPEDPISFMITHLRRNNDN--VPKVVIL 63

Query: 176 FPPT------IFFLCVHLCVTNICSKQ 196
            PP         +LC HL  +N+ +K+
Sbjct: 64  GPPASGKTTIAMWLCKHLN-SNLITKE 89


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.135    0.436 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,437,064
Number of Sequences: 539616
Number of extensions: 7556578
Number of successful extensions: 14238
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 14236
Number of HSP's gapped (non-prelim): 13
length of query: 440
length of database: 191,569,459
effective HSP length: 121
effective length of query: 319
effective length of database: 126,275,923
effective search space: 40282019437
effective search space used: 40282019437
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)