Query 013577
Match_columns 440
No_of_seqs 150 out of 173
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 13:11:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013577.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013577hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 93.5 0.23 7.9E-06 43.7 7.9 120 248-385 87-216 (255)
2 3f1y_A Mannosyl-3-phosphoglyce 91.0 0.69 2.4E-05 46.0 8.7 199 148-384 93-310 (387)
3 2d7i_A Polypeptide N-acetylgal 90.7 1 3.6E-05 46.2 10.0 137 248-387 195-342 (570)
4 1xhb_A Polypeptide N-acetylgal 89.9 0.56 1.9E-05 46.1 6.9 138 248-387 113-262 (472)
5 2ffu_A Ppgalnact-2, polypeptid 89.5 2.1 7.3E-05 42.6 10.8 137 248-386 145-293 (501)
6 2z86_A Chondroitin synthase; G 88.9 1.1 3.9E-05 45.4 8.5 182 199-387 122-334 (625)
7 2z86_A Chondroitin synthase; G 83.4 22 0.00076 36.0 14.6 193 148-383 374-572 (625)
8 2nxv_A ATP synthase subunits r 73.2 5.3 0.00018 36.1 5.8 29 248-276 73-101 (249)
9 4fix_A UDP-galactofuranosyl tr 70.1 14 0.00047 39.3 8.9 132 249-383 268-417 (657)
10 3bcv_A Putative glycosyltransf 65.6 4.4 0.00015 35.0 3.4 111 149-285 5-120 (240)
11 1omz_A Alpha-1,4-N-acetylhexos 47.3 36 0.0012 33.4 6.8 77 199-277 54-134 (293)
12 2bo4_A Mannosylglycerate synth 47.2 16 0.00056 36.6 4.5 115 248-376 91-210 (397)
13 4hg6_A Cellulose synthase subu 34.8 28 0.00097 37.5 4.1 137 232-383 224-368 (802)
14 3l7i_A Teichoic acid biosynthe 30.4 11 0.00037 39.7 0.0 34 248-281 82-115 (729)
15 2c0n_A A197; thermophil protei 25.6 25 0.00084 33.2 1.5 38 237-281 44-84 (203)
16 2ls4_A High affinity copper up 27.7 19 0.00064 23.9 0.0 15 32-46 5-19 (26)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=93.46 E-value=0.23 Score=43.66 Aligned_cols=120 Identities=10% Similarity=-0.036 Sum_probs=68.9
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHHh-CCcccCCCcc-----CCCCcceeeeeecCCcceeeecccCCCCCCCCCC
Q 013577 248 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKH-GLEISQPGLE-----PNKGLTWQMTKRRGDREVHKETEEKPGWCSNPHL 321 (440)
Q Consensus 248 a~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~~-gLeISQPALd-----~~S~ish~iT~R~~~~~vHr~~~~~~g~c~~~~~ 321 (440)
+..|||++.|+|..++.-.++++++.++++ +..+..+... .+....+.. . .+...+..
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-------------- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKET-V-RPAAQVTW-------------- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEE-E-ECCCSCBS--------------
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhc-c-CchHHHHH--------------
Confidence 578999999999999998899999999876 6666655442 111110100 0 01100000
Q ss_pred CCccceEEeccccccHHHHHHhh-hh---hcCCCcceehHHHHhhHhhcCCCCcEEEEeeeeEEeecc
Q 013577 322 PPCAAFVEIMAPVFSRDAWRCVW-HM---IQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQTV 385 (440)
Q Consensus 322 ppcTgFVEIMAPVFSR~Awrcvw-~m---iQNDLvhGWGLDf~w~~Ca~~~~~kIGVVDa~~VvH~g~ 385 (440)
....++-..+-+|+|++++.+- .+ +..+.....+-|+.+...+... .++..++...+.|+..
T Consensus 151 -~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~-g~~~~~~~~~~~~r~~ 216 (255)
T 1qg8_A 151 -NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF-YPFYPLDEELDLNYIT 216 (255)
T ss_dssp -CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTT-CCBEEEEEEEEEEEEC
T ss_pred -hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHh-CCEEEecCcEEEEEEc
Confidence 0011222234589999999875 33 1112222345676655444333 3699999998888743
No 2
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=90.98 E-value=0.69 Score=45.95 Aligned_cols=199 Identities=12% Similarity=0.037 Sum_probs=103.6
Q ss_pred CCceEEEEEeccccccchHHHHhhhccCCCCccccccccccccccccCCCCCCcEEEEEEECCCCCccccc--ccCCcce
Q 013577 148 QPKYLVTFTVGYDQKNNINAAIKKVGFCFPPTIFFLCVHLCVTNICSKQFSDNFTIVLFHYDGRTTEWNEF--EWSKRAI 225 (440)
Q Consensus 148 ~~~~Lla~~vG~~qk~~v~~~v~k~~~~f~~~~~~~~~~~~~~~~~s~~~~~nFdV~LFhYDG~v~eW~d~--~Ws~~ai 225 (440)
.++..+.+++ ++..+++.++|+.+- +.. .+...++.|+++. ||+.|+=.+. ++.. .
T Consensus 93 ~p~vSVVIP~-yNe~~~l~~~l~sl~-----------------~~l-~~~~~~~EIIVVD-DgStD~T~~i~~~~~~--~ 150 (387)
T 3f1y_A 93 GLTVSAVLPS-RNVADTVGGIIDEIH-----------------ALN-ERAPLIDQILVVD-ADSEDGTAGVAASHGA--E 150 (387)
T ss_dssp TCCEEEEEEE-SSCTTTHHHHHHHHH-----------------HHH-HHSCCCSEEEEEE-CSCSSSHHHHHHHTTC--E
T ss_pred CCeEEEEEEc-CCCHHHHHHHHHHHH-----------------HHH-hcCCCCeEEEEEc-CcCCccHHHHHHHhCc--h
Confidence 4667777777 777788888887710 000 0113468877555 7888753221 1111 1
Q ss_pred EEEe--------eccccccchhhccCcccccCccEEEEecCccc-cCCCCHHHHHHHHHHh-CCcccCCCccCCCCccee
Q 013577 226 HVSV--------RKQTKWWYAKRFLHPDIVASYDYIFIWDEDLG-VEHFNAEEYIKLVRKH-GLEISQPGLEPNKGLTWQ 295 (440)
Q Consensus 226 HVsa--------~kqtKWw~akRFLHPdiva~YDYIfLwDDDL~-Vd~f~i~ryf~Ivr~~-gLeISQPALd~~S~ish~ 295 (440)
.+.. .+++|-.-.+.-+. .+.+|||++.|.|.. ++...+.++++.+.+. +..+..............
T Consensus 151 v~~~~~~~i~~~~n~G~g~A~n~G~~---~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~ 227 (387)
T 3f1y_A 151 VYSENELMSGYGDAHGKGDAMWRALS---VTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGES 227 (387)
T ss_dssp EEEGGGTTGGGCSCCSHHHHHHHHTT---TCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC------
T ss_pred hcccceeEecCCccCCHHHHHHHHHH---hcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccc
Confidence 1111 24444333333331 257999999999999 8999999999988775 566655433211000000
Q ss_pred eeeecCCcceeeecc----c-CCCCCCCCCCCCccceEEeccccccHHHHHHhhhhhcCCCcceehHHHHhh-HhhcC-C
Q 013577 296 MTKRRGDREVHKETE----E-KPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALR-KCVEP-A 368 (440)
Q Consensus 296 iT~R~~~~~vHr~~~----~-~~g~c~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miQNDLvhGWGLDf~w~-~Ca~~-~ 368 (440)
.. +.....+-+... . .-..-.... -+.++|. +|+|++++.+ .+ ..|||.|..+. +++.. .
T Consensus 228 ~~-~~~~g~v~~~~~~~l~~~~~~~l~~~~-d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G 294 (387)
T 3f1y_A 228 IE-EDGGGRVTELTAKPLFNLFYPELAGFV-QPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVG 294 (387)
T ss_dssp -C-CBCCSHHHHHTHHHHHHHHCGGGTTCS-CTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHC
T ss_pred cc-cccCCchhhhhHHHHHHHHhHhhcccc-ccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcC
Confidence 00 111111100000 0 000000001 1223332 6999999976 43 26899986654 33332 2
Q ss_pred CCcEEEEeeeeEEeec
Q 013577 369 HEKIGVVDSQWIVHQT 384 (440)
Q Consensus 369 ~~kIGVVDa~~VvH~g 384 (440)
-++|.=|+-.+..|..
T Consensus 295 ~~~I~eVpi~~~~h~~ 310 (387)
T 3f1y_A 295 LGAMAQVDLGERQNRH 310 (387)
T ss_dssp GGGEEEEEEEECCCCC
T ss_pred CCeEEEEecceeecCC
Confidence 2458888888888853
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=90.68 E-value=1 Score=46.24 Aligned_cols=137 Identities=11% Similarity=0.042 Sum_probs=74.6
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eec---CCcceeeecccCCC-CCC
Q 013577 248 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNK--GLTWQMT----KRR---GDREVHKETEEKPG-WCS 317 (440)
Q Consensus 248 a~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPALd~~S--~ish~iT----~R~---~~~~vHr~~~~~~g-~c~ 317 (440)
+..|||++.|+|..++.-.++++++.+++..--+..|.++.-. .+.+... .+. .....++ ...... .-.
T Consensus 195 A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 273 (570)
T 2d7i_A 195 ATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKR-IPIPPELQKA 273 (570)
T ss_dssp CCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEE-ECCCTTTCCS
T ss_pred cCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccc-cccchhhhcc
Confidence 5789999999999999999999999998765445555443211 1111110 000 0000000 000000 000
Q ss_pred CCCCCCccceEEeccccccHHHHHHhhhhhcCCCccee-hHHHHhhHhhcCCCCcEEEEeeeeEEeeccCC
Q 013577 318 NPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGW-GLDFALRKCVEPAHEKIGVVDSQWIVHQTVPS 387 (440)
Q Consensus 318 ~~~~ppcTgFVEIMAPVFSR~Awrcvw~miQNDLvhGW-GLDf~w~~Ca~~~~~kIGVVDa~~VvH~g~Pt 387 (440)
++..+--+.++-..+-+|+|++|+.+=.+ . +....| |=|+-+..-+.....+|.++....|.|..+..
T Consensus 274 ~~~~~~~~~~~~g~~~~irr~~~~~iGgf-D-e~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~ 342 (570)
T 2d7i_A 274 DPSDPFESPVMAGGLFAVDRKWFWELGGY-D-PGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKY 342 (570)
T ss_dssp STTSCEECSSCCSSSEEEEHHHHHHTTSS-C-TTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSS
T ss_pred CCCcceecccccceEEEEEHHHHHhcCCC-C-CcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcccc
Confidence 01111111222223447999999987443 3 334567 45655554444456799999999999975544
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=89.90 E-value=0.56 Score=46.10 Aligned_cols=138 Identities=11% Similarity=0.067 Sum_probs=71.8
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCCccCC--CCccee----eeeecCCcceeeecccCCC-----CC
Q 013577 248 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPN--KGLTWQ----MTKRRGDREVHKETEEKPG-----WC 316 (440)
Q Consensus 248 a~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPALd~~--S~ish~----iT~R~~~~~vHr~~~~~~g-----~c 316 (440)
+..|||++.|+|..++.-.++++++.+++..-.+.-|.++.- ..+.+. .....-...++......+. .-
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK 192 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTT
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhccc
Confidence 679999999999999999999999999887766666654311 111110 0000000000000000000 00
Q ss_pred CCCCCCCccceEEeccccccHHHHHHhhhhhcCCCcceeh-HHHHhhHhhcCCCCcEEEEeeeeEEeeccCC
Q 013577 317 SNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDSQWIVHQTVPS 387 (440)
Q Consensus 317 ~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miQNDLvhGWG-LDf~w~~Ca~~~~~kIGVVDa~~VvH~g~Pt 387 (440)
.+...+-.+.++-..+=+|+|++|+.+=.+ ..+ ...|| =|+-+..-+.....++.++....|.|....+
T Consensus 193 ~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-de~-~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 193 GDRTLPVRTPTMAGGLFSIDRDYFQEIGTY-DAG-MDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp TCTTSCEECSBCCSSSEEEEHHHHHHTTSC-CTT-SCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred CCCCCcccCccccceeEEEEHHHHHHcCCC-CCc-ccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCc
Confidence 000111111122222336899999987543 323 34664 3443333333345799999999999986543
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=89.54 E-value=2.1 Score=42.62 Aligned_cols=137 Identities=11% Similarity=0.110 Sum_probs=75.4
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCCccCCC--Ccceeeee---ecC-CcceeeecccCC-----CCC
Q 013577 248 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNK--GLTWQMTK---RRG-DREVHKETEEKP-----GWC 316 (440)
Q Consensus 248 a~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPALd~~S--~ish~iT~---R~~-~~~vHr~~~~~~-----g~c 316 (440)
+..|||++.|+|..++.-.++++++.+++..-.+..|.++.-. .+.+.-.. +.. ...++......+ ..-
T Consensus 145 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (501)
T 2ffu_A 145 AQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQ 224 (501)
T ss_dssp CCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTS
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhcc
Confidence 5789999999999999999999999999887777777653211 11110000 000 000000000000 000
Q ss_pred CCCCCCCccceEEeccccccHHHHHHhhhhhcCCCccee-hHHHHhhHhhcCCCCcEEEEeeeeEEeeccC
Q 013577 317 SNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGW-GLDFALRKCVEPAHEKIGVVDSQWIVHQTVP 386 (440)
Q Consensus 317 ~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miQNDLvhGW-GLDf~w~~Ca~~~~~kIGVVDa~~VvH~g~P 386 (440)
.++..+-.+.++-..+=+|+|++++.+=.+ . +....| |=|+-+..-+.....+|.++....|.|..+.
T Consensus 225 ~~~~~~~~~~~~~g~~~~irr~~~~~iGgf-d-e~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~ 293 (501)
T 2ffu_A 225 GNPVAPIKTPMIAGGLFVMDKFYFEELGKY-D-MMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRK 293 (501)
T ss_dssp SCTTSCEECSSCCSSSEEEEHHHHHHTTCC-C-TTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCS
T ss_pred CCCCCcccCccccceEEEEEHHHHHHhCCC-C-ccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEccC
Confidence 011111111122222348999999987543 3 333467 4555554333334579999999999997443
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=88.89 E-value=1.1 Score=45.44 Aligned_cols=182 Identities=16% Similarity=0.235 Sum_probs=89.4
Q ss_pred CCcEEEEEEECCCCCcccc-c-ccCC-cceEEEeecc-c--cccchhhccCcccccCccEEEEecCccccCCCCHHHHHH
Q 013577 199 DNFTIVLFHYDGRTTEWNE-F-EWSK-RAIHVSVRKQ-T--KWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIK 272 (440)
Q Consensus 199 ~nFdV~LFhYDG~v~eW~d-~-~Ws~-~aiHVsa~kq-t--KWw~akRFLHPdiva~YDYIfLwDDDL~Vd~f~i~ryf~ 272 (440)
.++.|+++. ||+.++=.+ + ++.+ .-+++....+ . |=.....-+. .+.+|||++.|+|..++.-.+.++++
T Consensus 122 ~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g~~---~a~g~~v~~lD~D~~~~~~~l~~~~~ 197 (625)
T 2z86_A 122 YDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLR---AAKYNYVAILDCDMAPNPLWVQSYME 197 (625)
T ss_dssp SCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHHHH---HCCSSEEEEECTTEEECTTHHHHHHH
T ss_pred CCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHHHH---hCCcCEEEEECCCCCCCHHHHHHHHH
Confidence 378888776 687764221 1 1111 1233333322 2 2111122221 25799999999999999999999999
Q ss_pred HHHHhC-CcccCCCccCCC-Cccee--e----eeec-CC----cceeeeccc--CCCC------CCC---CCCCCccceE
Q 013577 273 LVRKHG-LEISQPGLEPNK-GLTWQ--M----TKRR-GD----REVHKETEE--KPGW------CSN---PHLPPCAAFV 328 (440)
Q Consensus 273 Ivr~~g-LeISQPALd~~S-~ish~--i----T~R~-~~----~~vHr~~~~--~~g~------c~~---~~~ppcTgFV 328 (440)
.+++.. .-+.+|-..... ...+. . ..+. +. ..+...... ...| ..+ ....+ ..++
T Consensus 198 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 276 (625)
T 2z86_A 198 LLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTP-FRFF 276 (625)
T ss_dssp HHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCG-GGGC
T ss_pred HHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCc-eeEE
Confidence 998753 344444322111 10000 0 0000 00 000000000 0000 000 00111 1233
Q ss_pred EeccccccHHHHHHhhhhhcCCCcceeh-HHHHhhHhhcCCCCcEEEEeeeeEEeeccCC
Q 013577 329 EIMAPVFSRDAWRCVWHMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDSQWIVHQTVPS 387 (440)
Q Consensus 329 EIMAPVFSR~Awrcvw~miQNDLvhGWG-LDf~w~~Ca~~~~~kIGVVDa~~VvH~g~Pt 387 (440)
=..+-+|+|++|+.+=. +..++ ..|| =|+-+..-+.....++..++...+.|...+.
T Consensus 277 ~g~~~~~rr~~l~~iGg-fde~~-~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~~~~ 334 (625)
T 2z86_A 277 SGGNVAFAKKWLFRAGW-FDEEF-THWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPG 334 (625)
T ss_dssp CTTEEEEETHHHHHHCC-CCTTC-SSCCCHHHHHHHHHHHTTCEEEECGGGCEEEECCC-
T ss_pred eeceeeeEHHHHHHhCC-Ccccc-ccCCcchhhhhhhHHhCCceEEEcccchhhccCCcc
Confidence 34455899999998743 33343 4664 6665554443355799999999999985443
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=83.45 E-value=22 Score=36.05 Aligned_cols=193 Identities=14% Similarity=0.110 Sum_probs=94.1
Q ss_pred CCceEEEEEeccccccchHHHHhhhccCCCCccccccccccccccccCCCCCCcEEEEEEECCCCCcccc-c-cc---CC
Q 013577 148 QPKYLVTFTVGYDQKNNINAAIKKVGFCFPPTIFFLCVHLCVTNICSKQFSDNFTIVLFHYDGRTTEWNE-F-EW---SK 222 (440)
Q Consensus 148 ~~~~Lla~~vG~~qk~~v~~~v~k~~~~f~~~~~~~~~~~~~~~~~s~~~~~nFdV~LFhYDG~v~eW~d-~-~W---s~ 222 (440)
.++.-+.++ -++..+.+.++++.+- .+--.++.|+++. ||+.|+=.+ + ++ ..
T Consensus 374 ~~~vsiii~-~yn~~~~l~~~l~s~~---------------------~q~~~~~eiivvd-d~S~d~t~~~~~~~~~~~~ 430 (625)
T 2z86_A 374 VPLVSIYIP-AYNCSKYIVRCVESAL---------------------NQTITDLEVCICD-DGSTDDTLRILQEHYANHP 430 (625)
T ss_dssp SCSEEEEEE-ESSCTTTHHHHHHHHH---------------------SSSCCSEEEEEEE-ESCSSSHHHHHHHHHTTCT
T ss_pred CCeEEEEEe-CCCCHHHHHHHHHHHH---------------------hCcCCCeEEEEEE-CcCChhHHHHHHHHHhhCC
Confidence 344444444 4677777777776610 0112578888766 477764111 1 11 12
Q ss_pred cceEEEeeccccccchhhccCcccccCccEEEEecCccccCCCCHHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecC
Q 013577 223 RAIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKH-GLEISQPGLEPNKGLTWQMTKRRG 301 (440)
Q Consensus 223 ~aiHVsa~kqtKWw~akRFLHPdiva~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~~-gLeISQPALd~~S~ish~iT~R~~ 301 (440)
+...+...++++-...+.-+. .+..|||++.|+|..++.-.++++++.+++. +..+..+.... ....
T Consensus 431 ~i~~~~~~n~G~~~a~n~g~~---~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---------~~~~ 498 (625)
T 2z86_A 431 RVRFISQKNKGIGSASNTAVR---LCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRN---------IDRE 498 (625)
T ss_dssp TEEEEEECCCCHHHHHHHHHH---HCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEE---------ECTT
T ss_pred cEEEEeCCCCCHHHHHHHHHH---hcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEE---------ECCC
Confidence 333343334443322222221 2578999999999999888888888877543 33333332110 0001
Q ss_pred CcceeeecccCCCCCCCCCCCCccceEEeccccccHHHHHHhhhhhcCCCcceehHHHHhhHhhcCCCCcEEEEeeeeEE
Q 013577 302 DREVHKETEEKPGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIV 381 (440)
Q Consensus 302 ~~~vHr~~~~~~g~c~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miQNDLvhGWGLDf~w~~Ca~~~~~kIGVVDa~~Vv 381 (440)
+..++. ....+.. . .... ..+++-..+-+|+|++|..+-.+ ..++. .+-|+.+..-+.... ++..++...+.
T Consensus 499 ~~~~~~-~~~~~~~-~-~~~~-~~~~~~~~~~~~~r~~~~~~ggf-d~~~~--~~eD~dl~~r~~~~g-~~~~~~~~~~~ 570 (625)
T 2z86_A 499 GNLISN-GYNWPIY-S-REKL-TSAMICHHFRMFTARAWNLTEGF-NESIS--NAVDYDMYLKLSEVG-PFKHINKICYN 570 (625)
T ss_dssp SCEEEE-CCCCSSC-C-HHHH-TTSCCCCSCEEEEHHHHTTTTCC-CSSCS--SCHHHHHHHHHTTTS-CEEEEEEEEEE
T ss_pred CCEecc-CcccccC-C-HHHH-hhcccCCceEEEEHHHHHHhCCC-CCccC--ChHHHHHHHHHHHhC-CEEEeCCcEEE
Confidence 111110 0000000 0 0000 00111112237899998876543 33333 456765554443333 89999887666
Q ss_pred ee
Q 013577 382 HQ 383 (440)
Q Consensus 382 H~ 383 (440)
|+
T Consensus 571 ~r 572 (625)
T 2z86_A 571 RV 572 (625)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 8
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=73.19 E-value=5.3 Score=36.12 Aligned_cols=29 Identities=10% Similarity=0.268 Sum_probs=26.7
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHH
Q 013577 248 ASYDYIFIWDEDLGVEHFNAEEYIKLVRK 276 (440)
Q Consensus 248 a~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~ 276 (440)
+..|||++.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 56899999999999999899999999887
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=70.07 E-value=14 Score=39.27 Aligned_cols=132 Identities=11% Similarity=-0.087 Sum_probs=69.9
Q ss_pred CccEEEEecCccccCCCCHHHHHHHHHHh-CCcccCCCcc-CCC-Cccee--eeeecCCcceeee--------cccCCCC
Q 013577 249 SYDYIFIWDEDLGVEHFNAEEYIKLVRKH-GLEISQPGLE-PNK-GLTWQ--MTKRRGDREVHKE--------TEEKPGW 315 (440)
Q Consensus 249 ~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~~-gLeISQPALd-~~S-~ish~--iT~R~~~~~vHr~--------~~~~~g~ 315 (440)
.||||++.|+|..++...++++++.++.. ...+..|.+- .+. ..-|. -..........+. ....+-.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 69999999999999999999999999876 3445555332 111 00000 0000000000000 0000000
Q ss_pred -----CCCCCCCCccceEEeccccccHHHHHHhhhhhcCCCcceehHHHHhhHhhcCCCCcEEEEeeeeEEee
Q 013577 316 -----CSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQ 383 (440)
Q Consensus 316 -----c~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miQNDLvhGWGLDf~w~~Ca~~~~~kIGVVDa~~VvH~ 383 (440)
....+.+..+.++-..+-+|+|++++.+=.+. +.. .++=|.-|..-+.....++..+....|.|.
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd--~~F-~~~ED~Dl~lR~~~~G~ki~~~p~a~V~H~ 417 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPL--PLF-IKWDDADYGLRAAEHGYPTVTLPGAAIWHM 417 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCC--SCS-SSSHHHHHHHHHHHTTCCEEEEEEEEEEEC
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCCCh--hHh-ccCcHHHHHHHHHHcCCeEEEECCEEEEEc
Confidence 00000011112222223579999999874432 222 334676666555445679999999999995
No 10
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=65.61 E-value=4.4 Score=34.97 Aligned_cols=111 Identities=15% Similarity=0.184 Sum_probs=64.1
Q ss_pred CceEEEEEeccccccchHHHHhhhccCCCCccccccccccccccccCCCCCCcEEEEEEECCCCCccccc--cc---CCc
Q 013577 149 PKYLVTFTVGYDQKNNINAAIKKVGFCFPPTIFFLCVHLCVTNICSKQFSDNFTIVLFHYDGRTTEWNEF--EW---SKR 223 (440)
Q Consensus 149 ~~~Lla~~vG~~qk~~v~~~v~k~~~~f~~~~~~~~~~~~~~~~~s~~~~~nFdV~LFhYDG~v~eW~d~--~W---s~~ 223 (440)
|+.-+.+++ ++..+.+.++++.+- ++-..+|.|+++. ||+.|+=.+. ++ ..+
T Consensus 5 p~vsViIp~-yn~~~~l~~~l~Sl~---------------------~q~~~~~eiIvvD-d~S~d~t~~~~~~~~~~~~~ 61 (240)
T 3bcv_A 5 PKVSVIVPI-YNVEKYLDQCVQALL---------------------AQTLSDIEIILID-DESPDNCPKICDDYAAQYPN 61 (240)
T ss_dssp CSEEEEEEE-SSCTTTHHHHHHHHH---------------------TCSSSSEEEEEEE-CCCSSSHHHHHHHHHHHCSS
T ss_pred CcEEEEEec-CCCHHHHHHHHHHHH---------------------hCcCCCeEEEEEE-CCCCcCHHHHHHHHHhhCCC
Confidence 455555555 666667777776610 0112478887654 6877641110 01 112
Q ss_pred ceEEEeeccccccchhhccCcccccCccEEEEecCccccCCCCHHHHHHHHHHhCCcccCCC
Q 013577 224 AIHVSVRKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPG 285 (440)
Q Consensus 224 aiHVsa~kqtKWw~akRFLHPdiva~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPA 285 (440)
...+...++++=.-.+.-+. .+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 62 i~~i~~~n~G~~~a~N~g~~---~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 62 IKVIHKKNAGLGMACNSGLD---VATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp EEEEECCCCCHHHHHHHHHH---HCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred EEEEECCCCChHHHHHHHHH---HcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 23333333332211111121 257899999999999999999999999998777766544
No 11
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=47.29 E-value=36 Score=33.37 Aligned_cols=77 Identities=14% Similarity=0.177 Sum_probs=49.0
Q ss_pred CCcEEEEEEECCCCCccccccc---CCcceEEEeeccccccchhhccC-cccccCccEEEEecCccccCCCCHHHHHHHH
Q 013577 199 DNFTIVLFHYDGRTTEWNEFEW---SKRAIHVSVRKQTKWWYAKRFLH-PDIVASYDYIFIWDEDLGVEHFNAEEYIKLV 274 (440)
Q Consensus 199 ~nFdV~LFhYDG~v~eW~d~~W---s~~aiHVsa~kqtKWw~akRFLH-Pdiva~YDYIfLwDDDL~Vd~f~i~ryf~Iv 274 (440)
..-+=+++.+-.....--+..| +..++.|....+.+=-.-.||+. ++ -+-|+||..|||+.++..+++.=|++-
T Consensus 54 ~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p~~~--i~T~AVLslDDDv~l~~~el~faF~vW 131 (293)
T 1omz_A 54 PSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQVFPE--VETNAVLMVDDDTLISAQDLVFAFSIW 131 (293)
T ss_dssp TTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSCCTT--CCSSEEEEECTTEEECHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhccCCCcc--CCcCEEEEEcCCCCCCHHHHHHHHHHH
Confidence 4566677777442111112223 22234455555554456788874 44 558999999999999999999888887
Q ss_pred HHh
Q 013577 275 RKH 277 (440)
Q Consensus 275 r~~ 277 (440)
+++
T Consensus 132 r~~ 134 (293)
T 1omz_A 132 QQF 134 (293)
T ss_dssp TTS
T ss_pred HHC
Confidence 654
No 12
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=47.25 E-value=16 Score=36.57 Aligned_cols=115 Identities=12% Similarity=0.081 Sum_probs=63.9
Q ss_pred cCccEEEEecCccc-cCCCCHHHHHHHHHHhCCcccCCCccCC---CCcceeeeeecCCcceeeecccCCCCCCCCCCCC
Q 013577 248 ASYDYIFIWDEDLG-VEHFNAEEYIKLVRKHGLEISQPGLEPN---KGLTWQMTKRRGDREVHKETEEKPGWCSNPHLPP 323 (440)
Q Consensus 248 a~YDYIfLwDDDL~-Vd~f~i~ryf~Ivr~~gLeISQPALd~~---S~ish~iT~R~~~~~vHr~~~~~~g~c~~~~~pp 323 (440)
+.+|||.+.|-|+. .+...+.++++.+++ |.++..+..... +.+.+.+ .|. .+. ..+. --.|...+.|
T Consensus 91 a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~-~~~---ll~-~~~~-~~~~~~i~dp- 162 (397)
T 2bo4_A 91 TQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMI-TRT---GFA-LLWP-HTELSWIEQP- 162 (397)
T ss_dssp CCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHT-HHH---HHH-HHCT-TSSGGGCSCT-
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHH-HHH---HHH-HHHH-HhhccccccC-
Confidence 78999999999996 798899999987754 566555432111 1000000 000 000 0000 0011122223
Q ss_pred ccceEEeccccccHHHHHHhhhhh-cCCCcceehHHHHhhHhhcCCCCcEEEEe
Q 013577 324 CAAFVEIMAPVFSRDAWRCVWHMI-QNDLVHGWGLDFALRKCVEPAHEKIGVVD 376 (440)
Q Consensus 324 cTgFVEIMAPVFSR~Awrcvw~mi-QNDLvhGWGLDf~w~~Ca~~~~~kIGVVD 376 (440)
-+||. +|+|++++.+.... .+ ..+|||.|..+...+.....+|.-|+
T Consensus 163 ~sG~~-----a~~R~vl~~l~~~~~~~-~~~~fg~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 163 LGGEL-----LMRREVAAMLYEDERVR-RRSDWGIDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp TCCCE-----EEEHHHHHHHHHCHHHH-TCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred CcccE-----EEeHHHHHHHhhhcccC-cCCCcchHHHHHHHHHHcCCEEEEEE
Confidence 23444 59999998764310 01 45799999887766654556787665
No 13
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=34.78 E-value=28 Score=37.49 Aligned_cols=137 Identities=12% Similarity=-0.016 Sum_probs=75.2
Q ss_pred cccccchhhccCcccccCccEEEEecCccccCCCCHHHHHHHHHH-hCCcccCCCccCCC-C-cceeeee-e---cCCcc
Q 013577 232 QTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEHFNAEEYIKLVRK-HGLEISQPGLEPNK-G-LTWQMTK-R---RGDRE 304 (440)
Q Consensus 232 qtKWw~akRFLHPdiva~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~-~gLeISQPALd~~S-~-ish~iT~-R---~~~~~ 304 (440)
++|=...+..+. .+.+|||.+.|+|..++...++++++.+++ .+..+.|....... . +...... . .....
T Consensus 224 ~GKa~alN~gl~---~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (802)
T 4hg6_A 224 HAKAGNMSAALE---RLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEM 300 (802)
T ss_dssp SHHHHHHHHHHH---HCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHH
T ss_pred CcchHHHHHHHH---hcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHH
Confidence 445555555442 257999999999999999999999999854 45666555332211 0 0000000 0 00000
Q ss_pred eeeecccC-CCCCCCCCCCCccceEEeccccccHHHHHHhhhhhcCCCcceehHHHHhhHhhcCCCCcEEEEeeeeEEee
Q 013577 305 VHKETEEK-PGWCSNPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQ 383 (440)
Q Consensus 305 vHr~~~~~-~g~c~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miQNDLvhGWGLDf~w~~Ca~~~~~kIGVVDa~~VvH~ 383 (440)
++...... ..+. . .++...+-+|+|++++.+=.+ ..+ ..+=|+.+...+.....++..++...+.|.
T Consensus 301 ~~~~~~~~~~~~~----~----~~~~G~~~~~Rr~al~~vGgf-~~~---~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~ 368 (802)
T 4hg6_A 301 FYGKIHRGLDRWG----G----AFFCGSAAVLRRRALDEAGGF-AGE---TITEDAETALEIHSRGWKSLYIDRAMIAGL 368 (802)
T ss_dssp HHHTHHHHHHHTT----C----CCCCSSSEEEEHHHHHHHTTC-CCS---SSSHHHHHHHHHHTTTCCEEECCCCCEEEC
T ss_pred HHHHHHhhHhhcC----C----ceecccchhhhHHHHHHcCCc-CCC---CcchHHHHHHHHHHcCCeEEEecCCEEEec
Confidence 01000000 0000 0 112233457999999987433 222 235688777666656778998887777774
No 14
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=30.41 E-value=11 Score=39.70 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=0.0
Q ss_pred cCccEEEEecCccccCCCCHHHHHHHHHHhCCcc
Q 013577 248 ASYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEI 281 (440)
Q Consensus 248 a~YDYIfLwDDDL~Vd~f~i~ryf~Ivr~~gLeI 281 (440)
+..|||++.|+|-.++...++++++.++..++-+
T Consensus 82 A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~ 115 (729)
T 3l7i_A 82 VETPYFMFLDADDELASYAITFYLEKFNNTDGLI 115 (729)
T ss_dssp ----------------------------------
T ss_pred ccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEE
Confidence 5789999999999998888888888887443333
No 15
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=25.65 E-value=25 Score=33.24 Aligned_cols=38 Identities=24% Similarity=0.443 Sum_probs=27.2
Q ss_pred chhhccCcccccCccEEEEecCc---cccCCCCHHHHHHHHHHhCCcc
Q 013577 237 YAKRFLHPDIVASYDYIFIWDED---LGVEHFNAEEYIKLVRKHGLEI 281 (440)
Q Consensus 237 ~akRFLHPdiva~YDYIfLwDDD---L~Vd~f~i~ryf~Ivr~~gLeI 281 (440)
.+.+||- + ..|||+++.|-| ++.+..++-|++ +.|.+|
T Consensus 44 lv~~Fl~-~--~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DV 84 (203)
T 2c0n_A 44 ALDMFLE-M--KDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDV 84 (203)
T ss_dssp HHHHHHH-C--TTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSE
T ss_pred HHHHHHh-c--CCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCE
Confidence 3455652 1 459999999999 887777777777 445554
No 16
>2ls4_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=27.70 E-value=19 Score=23.90 Aligned_cols=15 Identities=27% Similarity=0.603 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhhhee
Q 013577 32 LIVTTFVGVVFGFFI 46 (440)
Q Consensus 32 ~~~~~~~~~~~g~~~ 46 (440)
+++++++|+.+|+|+
T Consensus 5 l~iavvlGa~~Gyf~ 19 (26)
T 2ls4_A 5 LCIAVAAGAGTGYFL 19 (26)
Confidence 577788888888876
Done!