Query         013579
Match_columns 440
No_of_seqs    187 out of 1853
Neff          11.0
Searched_HMMs 46136
Date          Fri Mar 29 05:17:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013579.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013579hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 4.4E-81 9.6E-86  584.0  42.2  424    1-436    63-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 6.4E-78 1.4E-82  554.0  37.7  418    1-436    69-499 (499)
  3 PLN03234 cytochrome P450 83B1; 100.0 1.5E-75 3.2E-80  565.8  43.8  429    1-436    65-499 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0 3.8E-75 8.2E-80  565.2  43.2  432    1-435    96-533 (543)
  5 PLN00110 flavonoid 3',5'-hydro 100.0 2.8E-74 6.1E-79  554.1  42.2  428    1-436    67-497 (504)
  6 PLN02183 ferulate 5-hydroxylas 100.0 8.6E-74 1.9E-78  553.9  42.5  426    1-439    72-515 (516)
  7 PLN02687 flavonoid 3'-monooxyg 100.0 1.2E-73 2.6E-78  553.0  43.2  430    1-436    70-509 (517)
  8 PLN02966 cytochrome P450 83A1  100.0 3.2E-73   7E-78  548.5  42.7  426    1-433    66-497 (502)
  9 PTZ00404 cytochrome P450; Prov 100.0 6.8E-73 1.5E-77  544.8  39.6  417    1-435    65-482 (482)
 10 PLN00168 Cytochrome P450; Prov 100.0 2.4E-72 5.1E-77  544.2  42.8  428    1-437    74-518 (519)
 11 PLN02394 trans-cinnamate 4-mon 100.0 4.1E-72 8.8E-77  542.3  42.1  426    1-436    67-502 (503)
 12 PLN02738 carotene beta-ring hy 100.0 6.2E-72 1.3E-76  544.3  42.4  418    1-437   168-596 (633)
 13 PLN02290 cytokinin trans-hydro 100.0 5.5E-72 1.2E-76  542.7  41.0  416    1-437    97-516 (516)
 14 PLN03112 cytochrome P450 famil 100.0 1.1E-71 2.4E-76  540.3  42.8  433    1-436    68-508 (514)
 15 PLN03018 homomethionine N-hydr 100.0 2.1E-71 4.5E-76  535.1  44.2  432    1-436    79-524 (534)
 16 PLN02655 ent-kaurene oxidase   100.0 1.4E-71   3E-76  532.3  41.9  425    1-437    36-465 (466)
 17 PLN02169 fatty acid (omega-1)- 100.0 1.5E-71 3.3E-76  534.1  40.0  415    3-436    75-500 (500)
 18 KOG0157 Cytochrome P450 CYP4/C 100.0 5.9E-72 1.3E-76  533.5  36.5  415    1-436    74-496 (497)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0 2.3E-70 5.1E-75  492.2  36.0  416    2-436    91-518 (519)
 20 PLN03195 fatty acid omega-hydr 100.0 7.5E-70 1.6E-74  527.3  39.7  421    1-436    68-516 (516)
 21 PLN02936 epsilon-ring hydroxyl 100.0 3.4E-69 7.4E-74  517.9  40.1  415    1-435    53-481 (489)
 22 PF00067 p450:  Cytochrome P450 100.0   4E-70 8.7E-75  526.6  33.5  419    1-431    37-462 (463)
 23 PLN02426 cytochrome P450, fami 100.0 6.2E-69 1.3E-73  515.2  40.9  405   11-436    86-500 (502)
 24 PLN02500 cytochrome P450 90B1  100.0 8.2E-69 1.8E-73  516.8  38.6  397    1-434    79-488 (490)
 25 PLN02774 brassinosteroid-6-oxi 100.0 1.7E-66 3.7E-71  496.8  38.0  392    1-434    67-462 (463)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 2.7E-66 5.9E-71  494.2  38.7  396    1-437    48-451 (452)
 27 PLN02196 abscisic acid 8'-hydr 100.0 1.2E-65 2.5E-70  490.6  37.2  388    1-435    72-462 (463)
 28 PLN02302 ent-kaurenoic acid ox 100.0 1.1E-64 2.3E-69  490.3  40.8  399    1-436    85-488 (490)
 29 PLN02987 Cytochrome P450, fami 100.0 2.6E-63 5.7E-68  472.7  39.1  394    1-435    71-468 (472)
 30 KOG0684 Cytochrome P450 [Secon 100.0 4.2E-59 9.1E-64  409.2  30.1  408    1-437    68-486 (486)
 31 COG2124 CypX Cytochrome P450 [ 100.0 2.1E-56 4.6E-61  417.4  32.7  360    9-435    49-410 (411)
 32 PLN02648 allene oxide synthase 100.0 3.3E-55 7.1E-60  414.0  26.3  370    1-410    59-463 (480)
 33 PF08492 SRP72:  SRP72 RNA-bind  83.0    0.74 1.6E-05   29.5   1.3    8  353-360    44-51  (59)
 34 PF12508 DUF3714:  Protein of u  67.8     1.7 3.6E-05   36.2  -0.1   44  289-334    51-94  (200)
 35 PRK06789 flagellar motor switc  65.7     8.2 0.00018   26.2   2.9   40  296-335    21-62  (74)
 36 PF12554 MOZART1:  Mitotic-spin  62.5      32  0.0007   21.1   4.7   42  231-272     6-47  (48)
 37 PF05952 ComX:  Bacillus compet  55.8      13 0.00028   23.7   2.3   19  253-271     4-22  (57)
 38 PF14129 DUF4296:  Domain of un  54.7      73  0.0016   22.4   6.7   51  227-277    29-79  (87)
 39 COG0851 MinE Septum formation   51.6      27 0.00058   24.5   3.5   17  262-278    36-52  (88)
 40 KOG3506 40S ribosomal protein   49.9     7.5 0.00016   24.2   0.6   11  372-382    12-22  (56)
 41 COG1759 5-formaminoimidazole-4  46.0      39 0.00084   30.3   4.5   70  293-395   275-351 (361)
 42 TIGR03779 Bac_Flav_CT_M Bacter  37.2      11 0.00023   35.3  -0.1   45  288-334   253-297 (410)
 43 PRK05933 type III secretion sy  35.9      42 0.00091   30.1   3.2   43  293-335   317-362 (372)
 44 PRK13991 cell division topolog  35.2      96  0.0021   21.9   4.3   18  261-278    35-52  (87)
 45 PRK13989 cell division topolog  34.7      87  0.0019   22.0   4.1   18  261-278    36-53  (84)
 46 COG2101 SPT15 TATA-box binding  33.9      11 0.00025   30.1  -0.4   36  350-385    35-70  (185)
 47 PF15300 INT_SG_DDX_CT_C:  INTS  33.0      30 0.00066   22.8   1.5   16  289-304    39-54  (65)
 48 PRK13987 cell division topolog  31.3 1.1E+02  0.0024   21.8   4.2   18  261-278    33-50  (91)
 49 PF09201 SRX:  SRX;  InterPro:   29.5      53  0.0011   25.3   2.4   23  379-401    18-40  (148)
 50 COG2071 Predicted glutamine am  29.4      39 0.00085   29.0   2.0   58  289-356    28-92  (243)
 51 PRK13988 cell division topolog  29.1 1.5E+02  0.0031   21.5   4.5   18  261-278    37-54  (97)
 52 COG1886 FliN Flagellar motor s  28.5      66  0.0014   25.0   3.0   43  293-335    82-126 (136)
 53 PF12444 Sox_N:  Sox developmen  28.4      39 0.00084   23.6   1.5   20  389-408    60-79  (84)
 54 PF05261 Tra_M:  TraM protein,   28.2 2.7E+02  0.0059   21.2   6.5   96  183-278    11-123 (127)
 55 PHA03162 hypothetical protein;  26.5      60  0.0013   24.7   2.2   24  375-398     2-25  (135)
 56 PF11227 DUF3025:  Protein of u  26.4      32 0.00069   28.8   0.9   23  334-356   188-211 (212)
 57 PF14550 Peptidase_U35_2:  Puta  25.8      48   0.001   25.2   1.7   22  313-334    71-92  (122)
 58 PF07886 BA14K:  BA14K-like pro  23.9      69  0.0015   17.5   1.6   16  367-382    16-31  (31)
 59 cd04516 TBP_eukaryotes eukaryo  23.3      37  0.0008   27.7   0.7   57  350-406    29-87  (174)
 60 PF14483 Cut8_M:  Cut8 dimerisa  22.8 1.5E+02  0.0032   17.1   2.9   13  258-270    23-35  (38)
 61 TIGR01215 minE cell division t  22.2 1.8E+02  0.0039   20.2   3.9   18  261-278    34-51  (81)
 62 PLN00062 TATA-box-binding prot  22.1      40 0.00086   27.7   0.7   55  350-404    29-85  (179)
 63 PTZ00218 40S ribosomal protein  20.2      45 0.00098   21.0   0.5   14  373-386    11-26  (54)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.4e-81  Score=584.03  Aligned_cols=424  Identities=44%  Similarity=0.775  Sum_probs=374.3

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCC-chhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPK-TIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQ   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~   79 (440)
                      |++|+|+.|+|||+|+++++|+++++...|++||. ....+.+..++.+++++.+|+.|+.+||+....+|+.+.++...
T Consensus        63 ~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~  142 (489)
T KOG0156|consen   63 FTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFM  142 (489)
T ss_pred             EEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhH
Confidence            68999999999999999999999999999999998 33556676678899999889999999999999999999999988


Q ss_pred             hhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           80 HVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                      ..-.++++.+++.+.+ ...+++||+...+..++.++|++++||.++...+    ++...++...+.+.....+.....+
T Consensus       143 ~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~fG~rf~~~~----~~~~~~~~~l~~~~~~~~~~~~~~d  217 (489)
T KOG0156|consen  143 EIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRMLFGRRFEEED----EEEFLELKELVEESLELLGSFNLSD  217 (489)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHHhCCccccCC----chHHHHHHHHHHHHHHHhCCccHHH
Confidence            7779999999999998 3233799999999999999999999999998641    1245568888888888888888899


Q ss_pred             ccc-chhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHH
Q 013579          160 LYP-SLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMD  238 (440)
Q Consensus       160 ~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  238 (440)
                      ++| ++.++....+..++.......+..++.++|+++++.. ..  +++.|+++.|++..++++.. .+++++|.+.+.+
T Consensus       218 ~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~--~~~~D~vD~lL~~~~~~~~~-~~t~~~i~~~~~d  293 (489)
T KOG0156|consen  218 YFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD--EEGRDFVDALLKLMKEEKAE-GLTDDHLKALILD  293 (489)
T ss_pred             HhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc--CCCCcHHHHHHHhhcccccC-CCCHHHHHHHHHH
Confidence            999 6777764446777777777889999999999998875 21  22389999999987654322 2999999999999


Q ss_pred             HhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCcccccccccc
Q 013579          239 MFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAES  318 (440)
Q Consensus       239 ~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~  318 (440)
                      +++||+|||++++.|++.+|++||++|+|+|+||++++|.++.++.+|+.+||||+|||+|++|++|++|+.+||.+.+|
T Consensus       294 l~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d  373 (489)
T KOG0156|consen  294 LFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTED  373 (489)
T ss_pred             HHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCC
Confidence            99999999999999999999999999999999999999998889999999999999999999999999999999999999


Q ss_pred             eeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHHHHH
Q 013579          319 VKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVANL  398 (440)
Q Consensus       319 ~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~l  398 (440)
                      +.|+||.|||||.|.+|.|++||||++|+||++|+||||++.+ +.+.....++|||.|+|.|||..||++++.+++|.|
T Consensus       374 ~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~l  452 (489)
T KOG0156|consen  374 TKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANL  452 (489)
T ss_pred             eeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999975 223367789999999999999999999999999999


Q ss_pred             HhcceeecCCCcccCcccccCccccccCCeeEEEeecC
Q 013579          399 LYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       399 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      |++|+|+.+++ ++++... +++...+.+++....+|.
T Consensus       453 lq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  453 LQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             HheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence            99999999887 5667666 466777778888777664


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.4e-78  Score=554.00  Aligned_cols=418  Identities=26%  Similarity=0.425  Sum_probs=337.6

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCC--CchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRP--KTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSA   78 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~   78 (440)
                      +.++.|.+|.++|+|||.+++|++++.+.|.++.  ...-...  ..+...++...|++||++|..+ +|.||+.+++.+
T Consensus        69 ~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~--~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m  145 (499)
T KOG0158|consen   69 VGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED--PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKM  145 (499)
T ss_pred             EEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC--cccccCchhccCchHHHHHHhh-ccccchhhHHHH
Confidence            4688999999999999999999999999999854  3222111  1123456777899999999997 999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHh-hhhcc-
Q 013579           79 QHVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMML-MTSFC-  156 (440)
Q Consensus        79 ~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-  156 (440)
                      .+++.+.++++++.+++....+..+++.+.+.++|.|||++++||.+.++..     +...+|.......... ..... 
T Consensus       146 ~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~-----d~~~~F~~~~~~~~~~~~~~~~l  220 (499)
T KOG0158|consen  146 FPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDANSLR-----DPKAEFRRMGRRAFFLSRGLFPL  220 (499)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhcccchhhhc-----CchHHHHHhhHHHHHHhhccchH
Confidence            9999999999999999876544678999999999999999999999998763     2444555544443333 11111 


Q ss_pred             ---ccccccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhc---CCccc-cCCH
Q 013579          157 ---FGDLYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQEN---GNLAI-ELSQ  229 (440)
Q Consensus       157 ---~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~---~~~~~-~l~~  229 (440)
                         ....+|.+...  + ..........+.+.+.+...++.|.++     ...+.|+++.|+++...   +.... .++.
T Consensus       221 ~~~~~~~~p~l~~~--l-~~~~~~~~~~~~~~~~v~~~v~~R~~~-----~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~  292 (499)
T KOG0158|consen  221 KFMLIFLFPKLALP--L-RVKLFPEDVTDFFRKLVNSRVEQREKE-----NIERNDFIDLLLDARASDFAKSKSHKALTD  292 (499)
T ss_pred             hHhHHHHhHHHHHh--h-hcccChHHHHHHHHHHHHHHHHHHHhc-----CCCCchHHHHHHHhhcccccccccccccCH
Confidence               11222322211  0 112223345566666777777766322     25678999999998753   11112 4999


Q ss_pred             HHHHHHHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCc
Q 013579          230 DTIKAILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPL  309 (440)
Q Consensus       230 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~  309 (440)
                      ++|+++|+.|++||.||||++|++++|+||+||++|+|||+||++++.+...+|+|.+++|+||++||+||||+||+++.
T Consensus       293 dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~  372 (499)
T KOG0158|consen  293 DEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF  372 (499)
T ss_pred             HHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc
Confidence            99999999999999999999999999999999999999999999998765559999999999999999999999999999


Q ss_pred             ccccccccceeeC-CeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHH
Q 013579          310 LVPRETAESVKLN-GYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAI  388 (440)
Q Consensus       310 ~~~R~~~~~~~i~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~  388 (440)
                      . .|.+++|++++ ++.||||+.|.++.|++||||++||||++|+||||.+.+.+ ..++..|+|||.|||.|+|.+||.
T Consensus       373 ~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~  450 (499)
T KOG0158|consen  373 L-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFAL  450 (499)
T ss_pred             c-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHH
Confidence            5 59999999999 99999999999999999999999999999999999987644 447789999999999999999999


Q ss_pred             HHHHHHHHHHHhcceeecCCCc-ccCcccccCccccccCCeeEEEeecC
Q 013579          389 ASVEYVVANLLYWFDWKLPFGV-VLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       389 ~~~~~~~~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      +|+|+.|+.||++|+++..+.. +.......++++.|+.++++++.+|.
T Consensus       451 mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  451 MEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             HHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence            9999999999999999998844 23111223788999999999999884


No 3  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.5e-75  Score=565.75  Aligned_cols=429  Identities=38%  Similarity=0.704  Sum_probs=354.7

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+++||+++++|+.++...|.++|...........+..+.++..++.|+++||.+..++|++++++.+.+
T Consensus        65 ~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~  144 (499)
T PLN03234         65 FTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRP  144 (499)
T ss_pred             EEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHH
Confidence            57899999999999999999999998888988886544443333345555666789999999986579999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      .+.+.++.+++.|.+.+.+++++|+.+.+..+++|+++.++||.+++..+     ....++.+.................
T Consensus       145 ~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  219 (499)
T PLN03234        145 VREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRYNEYG-----TEMKRFIDILYETQALLGTLFFSDL  219 (499)
T ss_pred             HHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHHHhCCcccccc-----hhHHHHHHHHHHHHHHcCCCcHHHH
Confidence            99999999999998776667899999999999999999999999887531     1234455554444433333334455


Q ss_pred             ccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHHh
Q 013579          161 YPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDMF  240 (440)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  240 (440)
                      +|++.++..+.+..++..++.+.+.+++..+|+++++....  ..+..|+++.|++..++++....+++++|.+++.+++
T Consensus       220 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll  297 (499)
T PLN03234        220 FPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP--KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIV  297 (499)
T ss_pred             hhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc--CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHH
Confidence            67665553333445677888999999999999987654322  1345799999987654332123589999999999999


Q ss_pred             hcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCccccccccccee
Q 013579          241 VGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAESVK  320 (440)
Q Consensus       241 ~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~~~  320 (440)
                      +||+|||+++++|++++|++||++|+|+|+|+++++++++.++++++++|||++|||+|+||++|++++.++|.+.+|++
T Consensus       298 ~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~  377 (499)
T PLN03234        298 VPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAK  377 (499)
T ss_pred             hcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCee
Confidence            99999999999999999999999999999999999988777899999999999999999999999999987899999999


Q ss_pred             eCCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCcCCCCCC--CCCCCccccccCCCCCCCcChhhHHHHHHHHHHH
Q 013579          321 LNGYDIPAKTRVFVNGWAIQRDPKEW-DRPEEFLPERFENNPTD--YRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVAN  397 (440)
Q Consensus       321 i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~  397 (440)
                      ++||.|||||.|.++.|++||||++| +||++||||||+++...  .+..+..++|||.|+|.|+|+++|++|+++++|.
T Consensus       378 ~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~  457 (499)
T PLN03234        378 IGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFAN  457 (499)
T ss_pred             ECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHH
Confidence            99999999999999999999999999 89999999999976432  2334668999999999999999999999999999


Q ss_pred             HHhcceeecCCCc---ccCcccccCccccccCCeeEEEeecC
Q 013579          398 LLYWFDWKLPFGV---VLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       398 ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      |+++|+|++.++.   ++.+....+++..|+..+.+.+++|.
T Consensus       458 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (499)
T PLN03234        458 LLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKHI  499 (499)
T ss_pred             HHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecCC
Confidence            9999999998753   34555567888888888888888763


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=3.8e-75  Score=565.21  Aligned_cols=432  Identities=27%  Similarity=0.472  Sum_probs=340.5

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+|+||+++++|+.+++..|++||.......+..+..++++..+|+.|+++||++..+++++..++.+.+
T Consensus        96 ~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~  175 (543)
T PLN02971         96 ACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHD  175 (543)
T ss_pred             EEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            47899999999999999999999999989999986544333322223457777899999999998667888777778889


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhh---ccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTS---FCF  157 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  157 (440)
                      .+.++++.+++.+.+.+.+++++|+.+.+..++++++++++||.++...+....++...++...+..+......   ..+
T Consensus       176 ~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (543)
T PLN02971        176 NRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCI  255 (543)
T ss_pred             HHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcH
Confidence            99999999998887665556789999999999999999999999874211000000111223333333322211   123


Q ss_pred             cccccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHH
Q 013579          158 GDLYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILM  237 (440)
Q Consensus       158 ~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~  237 (440)
                      .+.+|++.+++. .+..+...+..+.+.+++..+|+++++..+.+......|+++.|++..++++ ...++++++.+++.
T Consensus       256 ~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~  333 (543)
T PLN02971        256 SDYLPMLTGLDL-NGHEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIK  333 (543)
T ss_pred             HHhCCchhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHH
Confidence            455676655421 2334455556777888888888887664332111234699999998653321 12499999999999


Q ss_pred             HHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCccccccccc
Q 013579          238 DMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAE  317 (440)
Q Consensus       238 ~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~  317 (440)
                      ++++||+|||+++++|++++|+.||++|+|+|+||++++++++.++++++++|||++|||+|+||++|++|+.++|.+.+
T Consensus       334 ~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~  413 (543)
T PLN02971        334 ELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALS  413 (543)
T ss_pred             HHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCC
Confidence            99999999999999999999999999999999999999998788999999999999999999999999999988999999


Q ss_pred             ceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCC--CCCCCccccccCCCCCCCcChhhHHHHHHHHH
Q 013579          318 SVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTD--YRGQDFQFIPFGAGRRGCPGMSFAIASVEYVV  395 (440)
Q Consensus       318 ~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~  395 (440)
                      |++++||.|||||.|.++.|++||||++|+||++|+||||++....  ....+..|+|||.|+|.|+|++||+.|+++++
T Consensus       414 d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~l  493 (543)
T PLN02971        414 DTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMML  493 (543)
T ss_pred             CeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999975322  11245679999999999999999999999999


Q ss_pred             HHHHhcceeecCCCc-ccCcccccCccccccCCeeEEEeec
Q 013579          396 ANLLYWFDWKLPFGV-VLDMTEASGVTLQRKSPLHVVPTLY  435 (440)
Q Consensus       396 ~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~  435 (440)
                      |.||++|+|+++++. ++++...++ +.-.+.++++.+++|
T Consensus       494 a~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        494 ARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             HHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeec
Confidence            999999999988755 566666666 553334788888877


No 5  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.8e-74  Score=554.09  Aligned_cols=428  Identities=37%  Similarity=0.671  Sum_probs=349.9

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+|+||+++++++.++...|.+++..........++.+++++.+|+.|+++||++..++|+.++++.+.+
T Consensus        67 ~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~  146 (504)
T PLN00110         67 MFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQ  146 (504)
T ss_pred             EEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhH
Confidence            57899999999999999999999988888988876543332223334567777899999999998446899999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      .+.++++.+++.+.+...+|+++|+.+++..+++|+++.++||.++...+    .....++...+..+........+...
T Consensus       147 ~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (504)
T PLN00110        147 VRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFETK----GSESNEFKDMVVELMTTAGYFNIGDF  222 (504)
T ss_pred             HHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccC----chhHHHHHHHHHHHHHHhccccHHHH
Confidence            99999999999998765567789999999999999999999999872110    11334566666665544333333456


Q ss_pred             ccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHHh
Q 013579          161 YPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDMF  240 (440)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  240 (440)
                      +|++.|+.. .+..++..+..+.+.+++...++++++....  .....|+++.+++...... ...++++++.++++.++
T Consensus       223 ~p~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~  298 (504)
T PLN00110        223 IPSIAWMDI-QGIERGMKHLHKKFDKLLTRMIEEHTASAHE--RKGNPDFLDVVMANQENST-GEKLTLTNIKALLLNLF  298 (504)
T ss_pred             cchHhhhCc-chHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cccCCChhhHHhhcccccC-CCCCCHHHHHHHHHhhh
Confidence            776655421 2234555667778888888888887764322  1234699999997543211 23699999999999999


Q ss_pred             hcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCccccccccccee
Q 013579          241 VGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAESVK  320 (440)
Q Consensus       241 ~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~~~  320 (440)
                      +||+|||+.+++|++++|++||++|+|+++|+++++++++.++++++++||||+|||+|+||++|++++.++|.+.+|++
T Consensus       299 ~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~  378 (504)
T PLN00110        299 TAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACE  378 (504)
T ss_pred             cccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCee
Confidence            99999999999999999999999999999999999987777899999999999999999999999999988899999999


Q ss_pred             eCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCC---CCCCccccccCCCCCCCcChhhHHHHHHHHHHH
Q 013579          321 LNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDY---RGQDFQFIPFGAGRRGCPGMSFAIASVEYVVAN  397 (440)
Q Consensus       321 i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~---~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~  397 (440)
                      ++||.|||||.|.++.|++||||++|+||++|+||||+++....   ......++|||+|+|.|+|++||..|+++++|+
T Consensus       379 ~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~  458 (504)
T PLN00110        379 VNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGT  458 (504)
T ss_pred             eCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999653211   112347999999999999999999999999999


Q ss_pred             HHhcceeecCCCcccCcccccCccccccCCeeEEEeecC
Q 013579          398 LLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       398 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      |+++|+|++.++.+..+....++++.|+.++++++++|.
T Consensus       459 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        459 LVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             HHHhceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence            999999998776544444456788889899999999884


No 6  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=8.6e-74  Score=553.92  Aligned_cols=426  Identities=39%  Similarity=0.745  Sum_probs=342.9

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+|+||+++++|+.+++..|+.++.......+...+.+++++.+|+.|+++||++..++|+.+.++.+.+
T Consensus        72 ~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~  151 (516)
T PLN02183         72 FHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWAS  151 (516)
T ss_pred             eEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            67899999999999999999999988888888876443333332234567777899999999985589999999999988


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      . .++++.+++.|...  .|+++|+.+++..+++|++++++||.+++.        ...++.+....+............
T Consensus       152 ~-~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~vi~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  220 (516)
T PLN02183        152 V-RDEVDSMVRSVSSN--IGKPVNIGELIFTLTRNITYRAAFGSSSNE--------GQDEFIKILQEFSKLFGAFNVADF  220 (516)
T ss_pred             H-HHHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHhHhhcCcccc--------hHHHHHHHHHHHHHHhCCccHHHh
Confidence            6 46899999998652  467899999999999999999999987653        223465665555444433344556


Q ss_pred             ccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccC-----CCCCCccHHHHHHHhhhcCC---------cccc
Q 013579          161 YPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDN-----DQSDKKDFVHILLQLQENGN---------LAIE  226 (440)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~dll~~ll~~~~~~~---------~~~~  226 (440)
                      +|++.++.. ....++..+..+.+.+++.+++++++++...+     ......|+++.++.+...+.         ....
T Consensus       221 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~  299 (516)
T PLN02183        221 IPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIK  299 (516)
T ss_pred             cchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCC
Confidence            776655421 12345666777888888888888776543211     01134689999998543210         0125


Q ss_pred             CCHHHHHHHHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCC
Q 013579          227 LSQDTIKAILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAP  306 (440)
Q Consensus       227 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~  306 (440)
                      ++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|++++++.++.++++++++||||+|||+|+||++|+
T Consensus       300 l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~  379 (516)
T PLN02183        300 LTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPP  379 (516)
T ss_pred             CCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCC
Confidence            89999999999999999999999999999999999999999999999999866678999999999999999999999999


Q ss_pred             CCcccccccccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCC-CCCCCCccccccCCCCCCCcChh
Q 013579          307 VPLLVPRETAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPT-DYRGQDFQFIPFGAGRRGCPGMS  385 (440)
Q Consensus       307 ~~~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~-~~~~~~~~~~~Fg~G~r~C~G~~  385 (440)
                      +|+.. |.+.+|++++||.|||||.|.++.|++||||++|+||++|+||||++++. +...+...|+|||.|+|.|+|++
T Consensus       380 ~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~  458 (516)
T PLN02183        380 IPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQ  458 (516)
T ss_pred             cccee-eeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChH
Confidence            99985 99999999999999999999999999999999999999999999997543 22234568999999999999999


Q ss_pred             hHHHHHHHHHHHHHhcceeecCCCc---ccCcccccCccccccCCeeEEEeecCCCC
Q 013579          386 FAIASVEYVVANLLYWFDWKLPFGV---VLDMTEASGVTLQRKSPLHVVPTLYSPVP  439 (440)
Q Consensus       386 la~~~~~~~~~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  439 (440)
                      ||++|+++++|+|+++|++++.++.   +..+...++++.++..++.+.+++|=-||
T Consensus       459 lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  515 (516)
T PLN02183        459 LGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYRLQCP  515 (516)
T ss_pred             HHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecCCCCC
Confidence            9999999999999999999987754   23333445666656678899999886666


No 7  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.2e-73  Score=553.04  Aligned_cols=430  Identities=38%  Similarity=0.701  Sum_probs=350.4

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+++||+++++++.++...|.+++.......+...+.+++++.+|+.|+++||++..++|+.++++.+.+
T Consensus        70 ~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~  149 (517)
T PLN02687         70 FRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRH  149 (517)
T ss_pred             eEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHH
Confidence            57899999999999999999999988888988876554444433345677777899999999998438999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      .+.++++.+++.|.+.. +++++|+.+++..+++|+++.++||.++...+.   +.....+.+.+..+........+...
T Consensus       150 ~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (517)
T PLN02687        150 VREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDG---DEKAREFKEMVVELMQLAGVFNVGDF  225 (517)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHhCccccccCC---cchHHHHHHHHHHHHHHhccCcHHHH
Confidence            99999999999998653 456899999999999999999999998764320   11334555555555543332223355


Q ss_pred             ccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcC---CccccCCHHHHHHHHH
Q 013579          161 YPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENG---NLAIELSQDTIKAILM  237 (440)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~---~~~~~l~~~~i~~~~~  237 (440)
                      +|++.|+.. .+..++..+..+.+.+++..+++++++....+ .....|+++.+++...+.   .....++++++.+++.
T Consensus       226 ~P~l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~  303 (517)
T PLN02687        226 VPALRWLDL-QGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG-SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLL  303 (517)
T ss_pred             hhhHHHhCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-CcccccHHHHHHHhhccccccccccCCCHHHHHHHHH
Confidence            676655422 12345566677888899999999887664321 124569999999865431   1123699999999999


Q ss_pred             HHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCccccccccc
Q 013579          238 DMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAE  317 (440)
Q Consensus       238 ~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~  317 (440)
                      .+++||+|||+.+++|++++|++||++|+|+++||++++++++.++++++++||||+|||+|+||++|+++..++|++.+
T Consensus       304 ~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~  383 (517)
T PLN02687        304 NLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAE  383 (517)
T ss_pred             HHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCC
Confidence            99999999999999999999999999999999999999987778899999999999999999999999999877899999


Q ss_pred             ceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCC----CCCCCccccccCCCCCCCcChhhHHHHHHH
Q 013579          318 SVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTD----YRGQDFQFIPFGAGRRGCPGMSFAIASVEY  393 (440)
Q Consensus       318 ~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~----~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~  393 (440)
                      |++++||.||+||.|.++.|++||||++|+||++|+||||++.+..    ....+..++|||.|+|.|+|++||.+|+++
T Consensus       384 d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~  463 (517)
T PLN02687        384 ECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTL  463 (517)
T ss_pred             CeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHH
Confidence            9999999999999999999999999999999999999999975321    122445799999999999999999999999


Q ss_pred             HHHHHHhcceeecCCCc---ccCcccccCccccccCCeeEEEeecC
Q 013579          394 VVANLLYWFDWKLPFGV---VLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       394 ~~~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      ++|+||++|+|++.++.   +..+...+++++.+..++++++++|.
T Consensus       464 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        464 LTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             HHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence            99999999999988654   23333345666677788999999884


No 8  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=3.2e-73  Score=548.53  Aligned_cols=426  Identities=34%  Similarity=0.661  Sum_probs=331.8

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+|+||+++++|+.+++..|.+++..........+...+.+..+|+.|+++|+++.+++|++++++.+.+
T Consensus        66 ~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~  145 (502)
T PLN02966         66 LSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKH  145 (502)
T ss_pred             EEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            46899999999999999999999988777877665433222222223344555699999999995589999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      .+.+.++++++.|.+.+.+++++|+.+++..+++|+++.++||.+++..+     .....+.+.+......+....+...
T Consensus       146 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  220 (502)
T PLN02966        146 VREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDG-----EEMKRFIKILYGTQSVLGKIFFSDF  220 (502)
T ss_pred             HHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHhCCccCccc-----hHHHHHHHHHHHHHHHhCcccHHHh
Confidence            99999999999998766566789999999999999999999999887431     1223344444443333333233455


Q ss_pred             ccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHHh
Q 013579          161 YPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDMF  240 (440)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  240 (440)
                      +|++.++..+.+..+......+...+++...++++.+....  ..+..|+++.++++.+++..+..++++++.+++.+++
T Consensus       221 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~  298 (502)
T PLN02966        221 FPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRV--KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIV  298 (502)
T ss_pred             hchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHH
Confidence            66544332222223333445566677777777665432111  1234689999997665432223689999999999999


Q ss_pred             hcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC--CcccccccCCchhHHHHHHHHhcccCCCCcccccccccc
Q 013579          241 VGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGK--LNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAES  318 (440)
Q Consensus       241 ~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~--~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~  318 (440)
                      +||+|||+.+|+|++++|++||++|+|+++||+++++++  +.++++++++||||+|||+|+||++|++++.++|.+.+|
T Consensus       299 ~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d  378 (502)
T PLN02966        299 VAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQD  378 (502)
T ss_pred             hccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCC
Confidence            999999999999999999999999999999999999742  357999999999999999999999999999878999999


Q ss_pred             eeeCCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHHHH
Q 013579          319 VKLNGYDIPAKTRVFVNGWAIQRDPKEW-DRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVAN  397 (440)
Q Consensus       319 ~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~  397 (440)
                      ++++||.|||||.|.+++|++||||++| |||++|+||||++++......+..|+|||.|+|.|+|++||++|+++++|.
T Consensus       379 ~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~  458 (502)
T PLN02966        379 TKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYAN  458 (502)
T ss_pred             eeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999 999999999999754322234568999999999999999999999999999


Q ss_pred             HHhcceeecCCCc---ccCcccccCccccccCCeeEEEe
Q 013579          398 LLYWFDWKLPFGV---VLDMTEASGVTLQRKSPLHVVPT  433 (440)
Q Consensus       398 ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~  433 (440)
                      ||++|+|++.++.   .++++...++...++..+.++++
T Consensus       459 ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (502)
T PLN02966        459 LLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPE  497 (502)
T ss_pred             HHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEE
Confidence            9999999988764   23334445666544445544433


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=6.8e-73  Score=544.84  Aligned_cols=417  Identities=22%  Similarity=0.366  Sum_probs=328.2

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+++||+++++|+.++...|.+++......... .+.++ ++.+|+.|+++|+++ ++.|+.++++.+.+
T Consensus        65 ~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~-~~~~l-~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~  141 (482)
T PTZ00404         65 FRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGT-FYHGI-VTSSGEYWKRNREIV-GKAMRKTNLKHIYD  141 (482)
T ss_pred             eEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeeec-cCCce-eccChHHHHHHHHHH-HHHHhhhccccHHH
Confidence            5789999999999999999999998777787777654332211 24444 455799999999997 89999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      .+.+.++.+++.|.+....++.+|+..++..+++|+++.++||.+++..+.. .++....+...+..++...........
T Consensus       142 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (482)
T PTZ00404        142 LLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFNEDISFDEDI-HNGKLAELMGPMEQVFKDLGSGSLFDV  220 (482)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcccccccccc-chhHHHHHHHHHHHHHHHhCCCchhhh
Confidence            9999999999999875545678999999999999999999999988653100 001123455555544433322122222


Q ss_pred             ccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHHh
Q 013579          161 YPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDMF  240 (440)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  240 (440)
                      ++++..+.  ........+..+.+.+++.+.++++++....   ....|+++.|+++.+...   ....+++++++..++
T Consensus       221 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~dll~~ll~~~~~~~---~~~~~~i~~~~~~~~  292 (482)
T PTZ00404        221 IEITQPLY--YQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP---EVPRDLLDLLIKEYGTNT---DDDILSILATILDFF  292 (482)
T ss_pred             hhHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC---CCcccHHHHHHHHhccCC---cccHHHHHHHHHHHH
Confidence            23222110  0112233455677788888877776654321   235699999998643211   233456889999999


Q ss_pred             hcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCccccccccccee
Q 013579          241 VGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAESVK  320 (440)
Q Consensus       241 ~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~~~  320 (440)
                      +||+|||+.+|+|++++|++||++|+|+++||++++++++.++++++++||||+|||+|+||++|++|+.++|.+.+|++
T Consensus       293 ~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~  372 (482)
T PTZ00404        293 LAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDII  372 (482)
T ss_pred             HhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEE
Confidence            99999999999999999999999999999999999987677899999999999999999999999999877899999999


Q ss_pred             e-CCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHHHHHH
Q 013579          321 L-NGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVANLL  399 (440)
Q Consensus       321 i-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll  399 (440)
                      + +||.|||||.|.++.+++||||++|+||++|+||||++..     .+..|+|||.|+|.|+|++||++|++++++.|+
T Consensus       373 l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll  447 (482)
T PTZ00404        373 IGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNII  447 (482)
T ss_pred             ecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHH
Confidence            9 9999999999999999999999999999999999999752     345899999999999999999999999999999


Q ss_pred             hcceeecCCCcccCcccccCccccccCCeeEEEeec
Q 013579          400 YWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLY  435 (440)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  435 (440)
                      ++|+|+.+++.+.......+++..| .+++|++++|
T Consensus       448 ~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R  482 (482)
T PTZ00404        448 LNFKLKSIDGKKIDETEEYGLTLKP-NKFKVLLEKR  482 (482)
T ss_pred             HhcEEecCCCCCCCcccccceeecC-CCceeeeecC
Confidence            9999998765443333345676665 4788988876


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.4e-72  Score=544.25  Aligned_cols=428  Identities=27%  Similarity=0.447  Sum_probs=336.3

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCccee-ecCCChhHHHHHhhhhhccCCHHHHHhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLG-NVNYGEYWRQLRKICVLELLSSKRVQSAQ   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~   79 (440)
                      |++|+|+.|+|+++||+++++++.++...|+.+|.......+. .+.+++ +..+|+.|+++||.+.+++|+.++++.+.
T Consensus        74 ~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~-~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~  152 (519)
T PLN00168         74 VSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRLLG-ESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFA  152 (519)
T ss_pred             EEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhhhc-cCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHH
Confidence            5789999999999999999999999888898887654333332 122233 23679999999985459999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhh-hhcccc
Q 013579           80 HVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLM-TSFCFG  158 (440)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  158 (440)
                      +.+.++++.+++.|.+....+..+|+.+.+..++.++++.++||.+++..       ....+......+.... ....+.
T Consensus       153 ~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  225 (519)
T PLN00168        153 PARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLMCFGERLDEP-------AVRAIAAAQRDWLLYVSKKMSVF  225 (519)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCcChh-------hHHHHHHHHHHHHHHhcCCCCHH
Confidence            99999999999999876545567899999999999999999999987532       2222323333222111 112233


Q ss_pred             ccccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccc---CC-C-----CCCccHHHHHHHhhhcCCccccCCH
Q 013579          159 DLYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTD---ND-Q-----SDKKDFVHILLQLQENGNLAIELSQ  229 (440)
Q Consensus       159 ~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~-~-----~~~~dll~~ll~~~~~~~~~~~l~~  229 (440)
                      ..+|++.+... .+..++..+..+.+.+++..+++++++....   .. .     ....|+++.|++....+.....+++
T Consensus       226 ~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~  304 (519)
T PLN00168        226 AFFPAVTKHLF-RGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTD  304 (519)
T ss_pred             HhCcchhhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCH
Confidence            45665432211 1223445567888888999999887764311   00 0     1145899999976432211136999


Q ss_pred             HHHHHHHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC-CcccccccCCchhHHHHHHHHhcccCCCC
Q 013579          230 DTIKAILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGK-LNIDMKDIDKMDYIKCVIKETLRLHAPVP  308 (440)
Q Consensus       230 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~-~~~~~~~~~~l~yl~a~i~E~lRl~p~~~  308 (440)
                      +++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++++ +.++++++++||||+|||+|+||++|+++
T Consensus       305 ~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~  384 (519)
T PLN00168        305 DEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAH  384 (519)
T ss_pred             HHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCc
Confidence            99999999999999999999999999999999999999999999999753 56899999999999999999999999999


Q ss_pred             cccccccccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCC-----CCCCCccccccCCCCCCCcC
Q 013579          309 LLVPRETAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTD-----YRGQDFQFIPFGAGRRGCPG  383 (440)
Q Consensus       309 ~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G  383 (440)
                      ..++|.+.+|++++||.|||||.|.+++|++||||++|+||++|+||||++....     ....+..++|||.|+|.|||
T Consensus       385 ~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G  464 (519)
T PLN00168        385 FVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAG  464 (519)
T ss_pred             ccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCc
Confidence            9888999999999999999999999999999999999999999999999974321     11234579999999999999


Q ss_pred             hhhHHHHHHHHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecCC
Q 013579          384 MSFAIASVEYVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYSP  437 (440)
Q Consensus       384 ~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  437 (440)
                      ++||.+|+++++|.||++|+|+++++.+.+.....+++..++.+++|++++|..
T Consensus       465 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        465 LGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence            999999999999999999999987754333333345566667789999998864


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.1e-72  Score=542.33  Aligned_cols=426  Identities=31%  Similarity=0.545  Sum_probs=328.1

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+|+||+++++|+.+++..|.+++.......+...+.+++++.+|+.|+++||.+..++|++++++.+.+
T Consensus        67 ~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~  146 (503)
T PLN02394         67 FLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRY  146 (503)
T ss_pred             EEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhH
Confidence            57899999999999999999999988777887776544454443455667777899999999997459999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcc-CCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhh--ccc
Q 013579           81 VRVEEVSCLINKIRRSCL-NGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTS--FCF  157 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  157 (440)
                      .+.++++.+++.|.+..+ .++.+|+.+++..+++|+++.++||.+++..+    +....++.............  ...
T Consensus       147 ~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  222 (503)
T PLN02394        147 GWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFDRRFESED----DPLFLKLKALNGERSRLAQSFEYNY  222 (503)
T ss_pred             HHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhCCCccccc----chhHHHHHHHHHHHHHHhcccccch
Confidence            999999999999986543 24469999999999999999999999987531    11111222222222111111  112


Q ss_pred             cccccchhhhhhhhchHHHHHHHHHH-HHHHHHHHHHHHHhhcccC--CCCCCccHHHHHHHhhhcCCccccCCHHHHHH
Q 013579          158 GDLYPSLKWIDVLTGFIGRLHETAAA-LGDLLDQVIEEHRVSLTDN--DQSDKKDFVHILLQLQENGNLAIELSQDTIKA  234 (440)
Q Consensus       158 ~~~~P~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~--~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~  234 (440)
                      ...+|++....  ....+........ ...+....++++++.....  +.....|+++.|+++..++    .++++++..
T Consensus       223 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~  296 (503)
T PLN02394        223 GDFIPILRPFL--RGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKG----EINEDNVLY  296 (503)
T ss_pred             hhhchHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhccccC----CCCHHHHHH
Confidence            23345433210  1111222222222 2223344566655432110  1123478999999875432    589999999


Q ss_pred             HHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCcccccc
Q 013579          235 ILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRE  314 (440)
Q Consensus       235 ~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~  314 (440)
                      ++.++++||+|||+.+++|++++|++||++|+|||+||++++++++.++++++++||||+|||+|+||++|++|+..+|.
T Consensus       297 ~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~  376 (503)
T PLN02394        297 IVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHM  376 (503)
T ss_pred             HHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCccccccee
Confidence            99999999999999999999999999999999999999999987677899999999999999999999999999998899


Q ss_pred             cccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCC--CCCCCccccccCCCCCCCcChhhHHHHHH
Q 013579          315 TAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTD--YRGQDFQFIPFGAGRRGCPGMSFAIASVE  392 (440)
Q Consensus       315 ~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~la~~~~~  392 (440)
                      +.+|++++||.||+||.|.+++|++||||++|+||++|+||||++.++.  .......++|||.|+|+|+|++||++|++
T Consensus       377 ~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~  456 (503)
T PLN02394        377 NLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILG  456 (503)
T ss_pred             cCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999975432  12245689999999999999999999999


Q ss_pred             HHHHHHHhcceeecCCCc-ccCcccccC-ccccccCCeeEEEeecC
Q 013579          393 YVVANLLYWFDWKLPFGV-VLDMTEASG-VTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       393 ~~~~~ll~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~v~~~~~~  436 (440)
                      +++|.|+++|+|++.++. ++++....+ +.+..+.+++|++.+|.
T Consensus       457 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        457 IVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             HHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence            999999999999987765 355554453 55534458999999886


No 12 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=6.2e-72  Score=544.27  Aligned_cols=418  Identities=24%  Similarity=0.393  Sum_probs=323.9

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++++|+.++|+|+||+.+++||.++...|.+++........  .+.++ ++.+|+.|+++|+.+ +++|+.++++.+++
T Consensus       168 ~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l-~~~dge~wr~rRr~l-~p~Fs~~~v~~l~~  243 (633)
T PLN02738        168 FRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGL-IPADGEIWRVRRRAI-VPALHQKYVAAMIS  243 (633)
T ss_pred             EEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCce-ecCCcHHHHHHHHhc-cHhhhHHHHHHHHH
Confidence            578999999999999999999999877777765432222222  24444 456699999999997 89999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      .+.++++.+++.|.+....++++|+...+..+++|+|+.++||.+++..+      ..+.+...+..............+
T Consensus       244 ~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  317 (633)
T PLN02738        244 LFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLS------NDTGIVEAVYTVLREAEDRSVSPI  317 (633)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccc------cchHHHHHHHHHHHHHHHHhhcch
Confidence            99999999999998876677899999999999999999999999988542      222344433333322211111111


Q ss_pred             ccchhh-hhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccc-------C-CCCCCccHHHHHHHhhhcCCccccCCHHH
Q 013579          161 YPSLKW-IDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTD-------N-DQSDKKDFVHILLQLQENGNLAIELSQDT  231 (440)
Q Consensus       161 ~P~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~-~~~~~~dll~~ll~~~~~~~~~~~l~~~~  231 (440)
                      ++|+.. +..+.+..++..+..+.+.+++..+++.+++..++       . ......|+++.|++..      ..+++++
T Consensus       318 ~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~------~~ls~~~  391 (633)
T PLN02738        318 PVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG------DDVSSKQ  391 (633)
T ss_pred             hhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC------CCCCHHH
Confidence            122111 11111223444445555666666655543321110       0 0123458999998642      2589999


Q ss_pred             HHHHHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCccc
Q 013579          232 IKAILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLV  311 (440)
Q Consensus       232 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~  311 (440)
                      +.++++.+++||+|||+.+|+|++++|++||++|+|||+||++++++ +.++++++++||||+|||+|+|||+|+++...
T Consensus       392 L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~  470 (633)
T PLN02738        392 LRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVLI  470 (633)
T ss_pred             HHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccccc
Confidence            99999999999999999999999999999999999999999999984 56899999999999999999999999999964


Q ss_pred             ccccccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCC--CCCCCCccccccCCCCCCCcChhhHHH
Q 013579          312 PRETAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPT--DYRGQDFQFIPFGAGRRGCPGMSFAIA  389 (440)
Q Consensus       312 ~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~la~~  389 (440)
                       |.+.+|.+++||.|||||.|.++.|.+||||++|+||++|+||||+.++.  .....+..++|||.|+|.|+|++||++
T Consensus       471 -R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~  549 (633)
T PLN02738        471 -RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASF  549 (633)
T ss_pred             -eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHH
Confidence             99999999999999999999999999999999999999999999985421  122345689999999999999999999


Q ss_pred             HHHHHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecCC
Q 013579          390 SVEYVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYSP  437 (440)
Q Consensus       390 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  437 (440)
                      |+++++|.|+++|+|++.++.+ +.....++++.|+.+++|++++|..
T Consensus       550 El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        550 ENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             HHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCC
Confidence            9999999999999999877642 1223345677788899999998853


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=5.5e-72  Score=542.69  Aligned_cols=416  Identities=22%  Similarity=0.364  Sum_probs=330.5

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.+.|+++||+++++|+.++ ..+..++...........|.++ ++.+|+.|+++||++ .+.|+.++++.+.+
T Consensus        97 ~~~~~g~~~~vvv~dp~~v~~il~~~-~~~~~r~~~~~~~~~~~~g~~l-~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~  173 (516)
T PLN02290         97 FIYWNGTEPRLCLTETELIKELLTKY-NTVTGKSWLQQQGTKHFIGRGL-LMANGADWYHQRHIA-APAFMGDRLKGYAG  173 (516)
T ss_pred             EEEccCCccEEEECCHHHHHHHHhcC-CCCCCCcchhhhHHHHHhcCCc-cccCchHHHHHHhhc-ccccCHHHHHHHHH
Confidence            57899999999999999999999976 3455555322111111124444 445699999999997 89999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCC-ceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNG-GAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~-~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                      .+.++++.+++.|.+....+ .++|+.+++..+++|+++.++||.+++..         +++......+...........
T Consensus       174 ~i~~~~~~l~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  244 (516)
T PLN02290        174 HMVECTKQMLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDSSYEKG---------KQIFHLLTVLQRLCAQATRHL  244 (516)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCCccccc---------hHHHHHHHHHHHHHHHhhhhh
Confidence            99999999999998765444 58999999999999999999999987531         233333333333222111122


Q ss_pred             cccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCCCccHHHHHHHhhhcC-CccccCCHHHHHHHHH
Q 013579          160 LYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDND-QSDKKDFVHILLQLQENG-NLAIELSQDTIKAILM  237 (440)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~dll~~ll~~~~~~-~~~~~l~~~~i~~~~~  237 (440)
                      .+|++.+++.  +..++.....+.+.+++.+.|+++++..+.+. .....|+++.++++.... .....++++++.+++.
T Consensus       245 ~~p~~~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~  322 (516)
T PLN02290        245 CFPGSRFFPS--KYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECK  322 (516)
T ss_pred             cCchhhhCCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHH
Confidence            3454444321  23445566777888999999988876543211 123579999999764321 1122488999999999


Q ss_pred             HHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCccccccccc
Q 013579          238 DMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAE  317 (440)
Q Consensus       238 ~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~  317 (440)
                      ++++||+|||+++++|++++|++||++|+|+|+||+++++++ .++++++++||||+|||+||||++|+++. ++|.+.+
T Consensus       323 ~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~  400 (516)
T PLN02290        323 TFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFE  400 (516)
T ss_pred             HHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecC
Confidence            999999999999999999999999999999999999999875 78999999999999999999999999996 5899999


Q ss_pred             ceeeCCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHHH
Q 013579          318 SVKLNGYDIPAKTRVFVNGWAIQRDPKEW-DRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVA  396 (440)
Q Consensus       318 ~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~  396 (440)
                      |++++||.|||||.|.++.|++||||++| +||++||||||++.+.   .....++|||.|+|.|+|++||++|++++++
T Consensus       401 d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la  477 (516)
T PLN02290        401 DIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILA  477 (516)
T ss_pred             CeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHH
Confidence            99999999999999999999999999999 8999999999995431   1335799999999999999999999999999


Q ss_pred             HHHhcceeecCCCcccCcccccCccccccCCeeEEEeecCC
Q 013579          397 NLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYSP  437 (440)
Q Consensus       397 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  437 (440)
                      .||++|+|+++++.+  .....+++..|+.+++|++++|.+
T Consensus       478 ~ll~~f~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        478 MLISKFSFTISDNYR--HAPVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             HHHHhceEeeCCCcc--cCccceeeecCCCCCeEEEEeCCC
Confidence            999999999876532  122346788899999999998864


No 14 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.1e-71  Score=540.31  Aligned_cols=433  Identities=33%  Similarity=0.638  Sum_probs=344.8

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++++|+.+.|+++||+++++|+.+++..|.+++.........++...++++.+|+.|+++||++..++|+.++++.+.+
T Consensus        68 ~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~  147 (514)
T PLN03112         68 VYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAK  147 (514)
T ss_pred             EEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhH
Confidence            57899999999999999999999988888988776433222122223455667799999999997578999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      .+.++++.+++.+.+...+++++|+.+.+..+++|+++.++||.++....... .....++......+............
T Consensus       148 ~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (514)
T PLN03112        148 HRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAG-PKEAMEFMHITHELFRLLGVIYLGDY  226 (514)
T ss_pred             HHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccc-hHHHHHHHHHHHHHHHHcCCCcHHHh
Confidence            99999999999887655566789999999999999999999999875321000 01223455555544433222233445


Q ss_pred             ccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHH
Q 013579          161 YPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDND-QSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDM  239 (440)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~  239 (440)
                      +|++.++.. .+..++..+..+.+.+++...++++++..+... .....|+++.++++...++ ...++++++.++++.+
T Consensus       227 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~  304 (514)
T PLN03112        227 LPAWRWLDP-YGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDM  304 (514)
T ss_pred             ChHHHhcCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHH
Confidence            676655422 123456667778888888999988776532211 1234699999998653321 1258999999999999


Q ss_pred             hhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCcccccccccce
Q 013579          240 FVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAESV  319 (440)
Q Consensus       240 ~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~~  319 (440)
                      ++||+|||+++++|++++|++||++|+|+++||++++++++.++++++++|||++|||+|+||++|++++.++|.+.+|+
T Consensus       305 ~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~  384 (514)
T PLN03112        305 IAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRAT  384 (514)
T ss_pred             hccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCe
Confidence            99999999999999999999999999999999999998877899999999999999999999999999987789999999


Q ss_pred             eeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCC---CC-CCCCccccccCCCCCCCcChhhHHHHHHHHH
Q 013579          320 KLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPT---DY-RGQDFQFIPFGAGRRGCPGMSFAIASVEYVV  395 (440)
Q Consensus       320 ~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~---~~-~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~  395 (440)
                      .++||.|||||.|.++.|++||||++|+||++||||||+.+..   .. ......++|||.|+|.|||++||++|+++++
T Consensus       385 ~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~l  464 (514)
T PLN03112        385 TINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMAL  464 (514)
T ss_pred             eEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999875421   11 1234579999999999999999999999999


Q ss_pred             HHHHhcceeecCCCc---ccCcccccCccccccCCeeEEEeecC
Q 013579          396 ANLLYWFDWKLPFGV---VLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       396 ~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      |+||++|+|++.++.   +..+....+++.+++.++++++++|.
T Consensus       465 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        465 ARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             HHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence            999999999987643   23333455777777889999999985


No 15 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.1e-71  Score=535.06  Aligned_cols=432  Identities=22%  Similarity=0.386  Sum_probs=330.1

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccC-CHHHHHhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELL-SSKRVQSAQ   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~f-s~~~l~~~~   79 (440)
                      |++|+|+.++|+|+||+++++|+.+++..|+.||.......+..++.++++..+|+.|+++||++ ++.| +....+.+.
T Consensus        79 ~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~  157 (534)
T PLN03018         79 ACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLE  157 (534)
T ss_pred             EEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHH
Confidence            57899999999999999999999988888998886555444432233566666799999999998 6654 554455566


Q ss_pred             hhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCC-Cc-cchHHHHHHHHHHhhh---h
Q 013579           80 HVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRG-NG-GSKFGELTRRQMMLMT---S  154 (440)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~---~  154 (440)
                      +.+.++++.+++.|.+....+.++|+.+++..+++|+++.++||.+++..+....+ .. ...+......+.....   .
T Consensus       158 ~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (534)
T PLN03018        158 AARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPG  237 (534)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCC
Confidence            66667899999999875545667999999999999999999999998643210000 01 1112222222222111   1


Q ss_pred             cccccccc-chhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCCCccHHHHHHHhhhcCCccccCCHHHH
Q 013579          155 FCFGDLYP-SLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDND-QSDKKDFVHILLQLQENGNLAIELSQDTI  232 (440)
Q Consensus       155 ~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~l~~~~i  232 (440)
                      ....+.+| ++.++. +.+...+.......+.+++.++++++++...+.. .....|+++.|+...++.+ ...++++++
T Consensus       238 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i  315 (534)
T PLN03018        238 FSPVDYVERWLRGWN-IDGQEERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEI  315 (534)
T ss_pred             CcHHHHhhhhhhhhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHH
Confidence            11223333 333211 1123344555667788888999988876432211 1234699999997654322 013899999


Q ss_pred             HHHHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCcccc
Q 013579          233 KAILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVP  312 (440)
Q Consensus       233 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~  312 (440)
                      .+++.++++||+|||+.+++|++++|+.||++|+|+++||+++++.++.++.+++++||||+|||+|+||++|++|...+
T Consensus       316 ~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~  395 (534)
T PLN03018        316 KAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPP  395 (534)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCC
Confidence            99999999999999999999999999999999999999999999877778999999999999999999999999999878


Q ss_pred             cccccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCC-----CCCCccccccCCCCCCCcChhhH
Q 013579          313 RETAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDY-----RGQDFQFIPFGAGRRGCPGMSFA  387 (440)
Q Consensus       313 R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~la  387 (440)
                      |++.+|++++||.|||||.|.++.|++||||++|+||++|+||||++.++..     ...+..++|||.|+|.|+|++||
T Consensus       396 r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA  475 (534)
T PLN03018        396 HVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVG  475 (534)
T ss_pred             cccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHH
Confidence            9999999999999999999999999999999999999999999999754321     12456899999999999999999


Q ss_pred             HHHHHHHHHHHHhcceeecCCCc-ccCcccccCccccccCCeeEEEeecC
Q 013579          388 IASVEYVVANLLYWFDWKLPFGV-VLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       388 ~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      .+|+++++|+|+++|+|++.++. +++.....+++..| .+++|++++|.
T Consensus       476 ~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  524 (534)
T PLN03018        476 TIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLMA-KPLLLSVEPRL  524 (534)
T ss_pred             HHHHHHHHHHHHHhceEEeCCCCCCCCccccccceecC-CCeEEEEEecc
Confidence            99999999999999999987653 33333333555555 58999999883


No 16 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.4e-71  Score=532.27  Aligned_cols=425  Identities=24%  Similarity=0.421  Sum_probs=337.8

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+|+||+++++|+.++...|++++.......+...+..+.+..+|+.|+++||.+..++|+...++.+.+
T Consensus        36 ~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~  115 (466)
T PLN02655         36 YTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRD  115 (466)
T ss_pred             EEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHH
Confidence            57899999999999999999999998888988865544443332222344445699999999877688899888899999


Q ss_pred             hHHHHHHHHHHHHHHhcc--CCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCc---cchHHHHHHHHHHhhhhc
Q 013579           81 VRVEEVSCLINKIRRSCL--NGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNG---GSKFGELTRRQMMLMTSF  155 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  155 (440)
                      .+.+.++.+++.+.+.+.  .++++|+..++..+++|+++.++||.+++..........   ...+......+.......
T Consensus       116 ~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (466)
T PLN02655        116 TRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEV  195 (466)
T ss_pred             HHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCc
Confidence            999999999999876644  356899999999999999999999998775421000000   112233333333333222


Q ss_pred             cccccccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHH
Q 013579          156 CFGDLYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAI  235 (440)
Q Consensus       156 ~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~  235 (440)
                      .+...+|+++|++. ....+...+....+.+++..++++++++...+  ....|+++.++...      ..++++++.++
T Consensus       196 ~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~d~l~~ll~~~------~~ls~~~i~~~  266 (466)
T PLN02655        196 DWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIARG--EERDCYLDFLLSEA------THLTDEQLMML  266 (466)
T ss_pred             chhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCcccHHHHHHhcc------CCCCHHHHHHH
Confidence            34456777666532 12233333344455678888888777653331  23468999999753      15899999999


Q ss_pred             HHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCccccccc
Q 013579          236 LMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRET  315 (440)
Q Consensus       236 ~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~  315 (440)
                      +.++++||+|||+++|+|++++|++||++|+++|+||+++++++. ++++++++||||+|||+|+||++|+++...+|.+
T Consensus       267 ~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~  345 (466)
T PLN02655        267 VWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFV  345 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCccc
Confidence            999999999999999999999999999999999999999998755 8999999999999999999999999999888999


Q ss_pred             ccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHH
Q 013579          316 AESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVV  395 (440)
Q Consensus       316 ~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~  395 (440)
                      .+|++++||.|||||.|.++.|++||||++|+||++|+||||++.... ......++|||+|+|.|||++||..|+++++
T Consensus       346 ~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l  424 (466)
T PLN02655        346 HEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAI  424 (466)
T ss_pred             CCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999975422 1234679999999999999999999999999


Q ss_pred             HHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecCC
Q 013579          396 ANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYSP  437 (440)
Q Consensus       396 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  437 (440)
                      ++||++|+|++.++.. ......+++..++.++.|++++|..
T Consensus       425 ~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        425 ARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             HHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeecCC
Confidence            9999999999876542 2234567788888999999998864


No 17 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.5e-71  Score=534.07  Aligned_cols=415  Identities=18%  Similarity=0.332  Sum_probs=323.1

Q ss_pred             EeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhh--hh
Q 013579            3 VYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSA--QH   80 (440)
Q Consensus         3 ~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~--~~   80 (440)
                      +|+|+.|+|+|+||+++++|+.++...|.+++.......  ..|.++++ .+|+.|+++||++ +|+|+.+.++.+  .+
T Consensus        75 ~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~~--~~g~gl~~-~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~  150 (500)
T PLN02169         75 PWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIFD--VLGEGILT-VDFELWEDLRKSN-HALFHNQDFIELSLSS  150 (500)
T ss_pred             eccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHHH--hhcCcccc-cCcHHHHHHHHHH-HHHhhhHHHHHHHHHH
Confidence            688999999999999999999987777766543322222  12555555 4599999999998 899999887643  47


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      .+.+.++.+++.+.+.+.++.++|+.+.+..+++|+++.++||.+.+..+.   .....++............   ....
T Consensus       151 ~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~  224 (500)
T PLN02169        151 NKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMTGYDPMSLSI---EMLEVEFGEAADIGEEAIY---YRHF  224 (500)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhheeCCCccccCC---CCCCCHHHHHHHHHHHHHH---hHHh
Confidence            777888999999887655677899999999999999999999998764321   1122345555444332221   2223


Q ss_pred             ccchhh-h-hhh-hchHHHHHHHHHHHHHHHHHHHHHHHhhcccC-C-CCCCccHHHHHHHhhhcCC-ccccCCHHHHHH
Q 013579          161 YPSLKW-I-DVL-TGFIGRLHETAAALGDLLDQVIEEHRVSLTDN-D-QSDKKDFVHILLQLQENGN-LAIELSQDTIKA  234 (440)
Q Consensus       161 ~P~l~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~dll~~ll~~~~~~~-~~~~l~~~~i~~  234 (440)
                      .|++.+ + .++ .+..++..++.+.+.+++.++|++++++.... + .+...|+++.+++...... ....++++++.+
T Consensus       225 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~  304 (500)
T PLN02169        225 KPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRD  304 (500)
T ss_pred             ccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHH
Confidence            353322 1 111 23456777889999999999999887642211 0 1124689999997643211 012478999999


Q ss_pred             HHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCcccccc
Q 013579          235 ILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRE  314 (440)
Q Consensus       235 ~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~  314 (440)
                      ++.++++||+|||+++|+|++++|++||++|+|+++||++++      +++++.+||||+|||+||||++|++|... |.
T Consensus       305 ~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~  377 (500)
T PLN02169        305 VIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KA  377 (500)
T ss_pred             HHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-ee
Confidence            999999999999999999999999999999999999999874      67899999999999999999999999987 66


Q ss_pred             cccc-eeeCCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCcCCCCCCCC-CCCccccccCCCCCCCcChhhHHHHH
Q 013579          315 TAES-VKLNGYDIPAKTRVFVNGWAIQRDPKEW-DRPEEFLPERFENNPTDYR-GQDFQFIPFGAGRRGCPGMSFAIASV  391 (440)
Q Consensus       315 ~~~~-~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~la~~~~  391 (440)
                      +.+| +.++||.|||||.|.+++|++||||++| +||++|+||||+++++..+ ..+..|+|||+|+|.|+|++||++|+
T Consensus       378 ~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~  457 (500)
T PLN02169        378 PAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQM  457 (500)
T ss_pred             cCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHH
Confidence            6555 5569999999999999999999999999 8999999999997543322 23678999999999999999999999


Q ss_pred             HHHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecC
Q 013579          392 EYVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       392 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      |+++|.||++|+|+++++.++  ....++++.|+.++.|++++|.
T Consensus       458 k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~~~~gl~l~l~~~~  500 (500)
T PLN02169        458 KIVALEIIKNYDFKVIEGHKI--EAIPSILLRMKHGLKVTVTKKI  500 (500)
T ss_pred             HHHHHHHHHHCEEEEcCCCCc--ccccceEEecCCCEEEEEEeCC
Confidence            999999999999998765433  3345678889999999999874


No 18 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=5.9e-72  Score=533.54  Aligned_cols=415  Identities=28%  Similarity=0.474  Sum_probs=335.7

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCch-hhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTI-AAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQ   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~   79 (440)
                      |+.|+|+.+.|+++||+.+++|+.++...+.+.+.++ ....+.  |++++++. |+.|+++||++ .++|+...++.+.
T Consensus        74 ~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~~~~l--G~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~  149 (497)
T KOG0157|consen   74 FKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESLKPWL--GDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFV  149 (497)
T ss_pred             hhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHHHHHh--cCccccCC-chHHHHHHhhc-cHhhhHHHHHHHH
Confidence            5789999999999999999999976555555555544 443433  56777777 99999999997 9999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           80 HVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                      +.+.+++..+...+.... .+..+|+++.++++++|+++.++||......+    .....++..++........   ...
T Consensus       150 ~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~~~~~G~~~~~~~----~~~~~~~~~a~~~~~~~~~---~~~  221 (497)
T KOG0157|consen  150 PVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIICKTAMGPESLDAE----GPELFEYVQAFDDLTELIS---KRI  221 (497)
T ss_pred             HHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHHHHhcCCcccccc----CCcccHHHHHHHHHHHHHH---HHH
Confidence            999999999888888743 23339999999999999999999992221111    1234455566655444433   223


Q ss_pred             ccc-chhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC---CCCccHHHHHHHhhhcCCccccCCHHHHHHH
Q 013579          160 LYP-SLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQ---SDKKDFVHILLQLQENGNLAIELSQDTIKAI  235 (440)
Q Consensus       160 ~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~  235 (440)
                      ..| +..++..+ +..++..++.+.+.++++++|++|+++....+.   ....|+++.+....+     ..+++++|+++
T Consensus       222 ~~p~~~~~~~~~-~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~  295 (497)
T KOG0157|consen  222 NLPLGTKFLYGL-KSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDE  295 (497)
T ss_pred             cCchhhhHHhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHH
Confidence            345 44444333 367888999999999999999999976543211   235778886332222     27999999999


Q ss_pred             HHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCC-cccccccCCchhHHHHHHHHhcccCCCCcccccc
Q 013579          236 LMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKL-NIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRE  314 (440)
Q Consensus       236 ~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~-~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~  314 (440)
                      +.+|++||+|||+++++|++++|+.||++|+|+++|+.++++++. .+.....++|+||++||+||||||||+|+.. |.
T Consensus       296 v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~  374 (497)
T KOG0157|consen  296 VDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RK  374 (497)
T ss_pred             HHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhh-cc
Confidence            999999999999999999999999999999999999999998533 2233333369999999999999999999986 99


Q ss_pred             cccceee-CCeeeCCCCEEEEehhhhccCCCCCC-CCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHH
Q 013579          315 TAESVKL-NGYDIPAKTRVFVNGWAIQRDPKEWD-RPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVE  392 (440)
Q Consensus       315 ~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~  392 (440)
                      +.+|+.+ +||.||||+.|.++++++||||++|+ ||++||||||+++......++.+|+|||+|+|.|+|++||++|+|
T Consensus       375 ~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemK  454 (497)
T KOG0157|consen  375 ATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMK  454 (497)
T ss_pred             cCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHH
Confidence            9999999 58999999999999999999999995 999999999997654434567899999999999999999999999


Q ss_pred             HHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecC
Q 013579          393 YVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       393 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      ++++.||++|+|+++.+..  ......++++|+.+++|++++|.
T Consensus       455 v~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  455 VVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             HHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCC
Confidence            9999999999999888743  45568899999999999999986


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.3e-70  Score=492.18  Aligned_cols=416  Identities=23%  Similarity=0.294  Sum_probs=348.7

Q ss_pred             eEe-ecCccEEEeccHHHHHHHHHHcCCcccCCC-Cc---hhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHH
Q 013579            2 YVY-FGNTPSLVVSSAELASQVMKTHDIAFSNRP-KT---IAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQ   76 (440)
Q Consensus         2 ~~~-~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~   76 (440)
                      +.. +|+.+.|++.||+++..+|++. +.++-|| ..   ...+. .+++...+++..|+.|.+.|..++...+++++++
T Consensus        91 ~~~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~~w~~~rd-~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~  168 (519)
T KOG0159|consen   91 REGMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIEPWVAYRD-FRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVR  168 (519)
T ss_pred             eeccCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccchhhhhHH-hhccCCCcccCCCHHHHHHHHHhchhhcCHHHHH
Confidence            445 7889999999999999999964 4567775 11   11222 2334445666679999999999988899999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccC---CceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhh
Q 013579           77 SAQHVRVEEVSCLINKIRRSCLN---GGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMT  153 (440)
Q Consensus        77 ~~~~~i~~~~~~l~~~l~~~~~~---~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (440)
                      .|.+.+++.+++++..++...+.   ..+.|+.+.+.++++..|+.++||.+++.++.. .+++.+.|.++++.++....
T Consensus       169 ~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~-~~~~a~~fi~ai~~~F~~s~  247 (519)
T KOG0159|consen  169 RYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLESICLVLLGTRLGLLGES-PPSEAQQFIDAIKKMFESSA  247 (519)
T ss_pred             HHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHhcccccccCC-CCHHHHHHHHHHHHHHHhHH
Confidence            99999999999999999988763   247999999999999999999999999998643 34466677788877776554


Q ss_pred             hcccccccc-chhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC--CCccHHHHHHHhhhcCCccccCCHH
Q 013579          154 SFCFGDLYP-SLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQS--DKKDFVHILLQLQENGNLAIELSQD  230 (440)
Q Consensus       154 ~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~dll~~ll~~~~~~~~~~~l~~~  230 (440)
                      .+   .+.| ++++++  ++.+++..++...+.+++...|+...++.+.+...  +..+.+..++..       .+++.+
T Consensus       248 ~l---~~~p~l~r~~~--t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~-------~~l~~k  315 (519)
T KOG0159|consen  248 QL---MLMPSLWRYFP--TKVWKDFVRAWDQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLR-------KELSRK  315 (519)
T ss_pred             HH---HhcchHHHhCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH-------ccCCHH
Confidence            32   2334 444543  36788999999999999999999888776553221  223344444432       168899


Q ss_pred             HHHHHHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC-CCcccccccCCchhHHHHHHHHhcccCCCCc
Q 013579          231 TIKAILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKG-KLNIDMKDIDKMDYIKCVIKETLRLHAPVPL  309 (440)
Q Consensus       231 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~  309 (440)
                      ++...+++++.||.|||++++.|+||+|++||++|++|++|+.++.++ +..++.+++.++|||.||||||+||||++|+
T Consensus       316 ~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~  395 (519)
T KOG0159|consen  316 DAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG  395 (519)
T ss_pred             HHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc
Confidence            999999999999999999999999999999999999999999999987 6778999999999999999999999999999


Q ss_pred             ccccccccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHH
Q 013579          310 LVPRETAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIA  389 (440)
Q Consensus       310 ~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~  389 (440)
                      .. |+..+|..++||.|||||.|.++.+.+.+||++|++|++|+|||||+++. ...+++.++|||.|+|+|+|++||.+
T Consensus       396 ~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAEl  473 (519)
T KOG0159|consen  396 NG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAEL  473 (519)
T ss_pred             cc-cccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHH
Confidence            86 99999999999999999999999999999999999999999999999863 34588999999999999999999999


Q ss_pred             HHHHHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecC
Q 013579          390 SVEYVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       390 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      |+-++||+++++|+++..++.++++  ...+++.|+.++.+++++|.
T Consensus       474 El~llLarllr~f~V~~~~~~pv~~--~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  474 ELHLLLARLLRNFKVEFLHEEPVEY--VYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             HHHHHHHHHHHhcceeecCCCCccc--eeEEEEcCCCCcceeeeeCC
Confidence            9999999999999999988755544  56777888899999988774


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=7.5e-70  Score=527.32  Aligned_cols=421  Identities=20%  Similarity=0.290  Sum_probs=321.1

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCch-hhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTI-AAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQ   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~   79 (440)
                      |++++|+.+.|+++||+++++|+.++...|.+.+.+. ....+  .|.+ +++.+|+.|+++||++ ++.|+.++++.+.
T Consensus        68 ~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~--~g~~-l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~  143 (516)
T PLN03195         68 VVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL--LGDG-IFNVDGELWRKQRKTA-SFEFASKNLRDFS  143 (516)
T ss_pred             EEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH--hcCe-eeccCcHHHHHHHHhc-chhhhHHHHHHHH
Confidence            5789999999999999999999987655565443221 11111  2444 4556799999999997 8999999999999


Q ss_pred             hhH-HHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccc
Q 013579           80 HVR-VEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFG  158 (440)
Q Consensus        80 ~~i-~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (440)
                      +.+ .+.++.+++.+.+...++.++|+.+++..+++|+++.++||.+++..+..   .....+....+.......   ..
T Consensus       144 ~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~  217 (516)
T PLN03195        144 TVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGVEIGTLSPS---LPENPFAQAFDTANIIVT---LR  217 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCCCccccccC---CCccHHHHHHHHHHHHHH---HH
Confidence            876 66678888888765445678999999999999999999999998764310   012244444443332211   11


Q ss_pred             ccccchhhhhhh-hchHHHHHHHHHHHHHHHHHHHHHHHhhcccCC---CCCCccHHHHHHHhhhcCCccccCCHHHHHH
Q 013579          159 DLYPSLKWIDVL-TGFIGRLHETAAALGDLLDQVIEEHRVSLTDND---QSDKKDFVHILLQLQENGNLAIELSQDTIKA  234 (440)
Q Consensus       159 ~~~P~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~  234 (440)
                      ...|.+.....+ .+..+...+....+.+++.+.+++++++.....   .....|+++.++++.++++  ..++++++.+
T Consensus       218 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~l~~~~i~~  295 (516)
T PLN03195        218 FIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDPD--SNFTDKSLRD  295 (516)
T ss_pred             HhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCCC--CCCCHHHHHH
Confidence            111221110001 122344556777888888889888776532110   1235689999997543221  3699999999


Q ss_pred             HHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC--------------------CCcccccccCCchhHH
Q 013579          235 ILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKG--------------------KLNIDMKDIDKMDYIK  294 (440)
Q Consensus       235 ~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~--------------------~~~~~~~~~~~l~yl~  294 (440)
                      +++++++||+|||+++++|++|+|+.||++|+|+|+||+++.++                    ++.++++++++||||+
T Consensus       296 ~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~  375 (516)
T PLN03195        296 IVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLH  375 (516)
T ss_pred             HHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHH
Confidence            99999999999999999999999999999999999999998643                    2457899999999999


Q ss_pred             HHHHHHhcccCCCCccccccccccee-eCCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCcCCCCCCCCCCCcccc
Q 013579          295 CVIKETLRLHAPVPLLVPRETAESVK-LNGYDIPAKTRVFVNGWAIQRDPKEW-DRPEEFLPERFENNPTDYRGQDFQFI  372 (440)
Q Consensus       295 a~i~E~lRl~p~~~~~~~R~~~~~~~-i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~  372 (440)
                      |||+|+||++|++|+.. |.+.+|.. ++||.|||||.|.++.|++||||++| +||++|+||||++.+......+..|+
T Consensus       376 Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~  454 (516)
T PLN03195        376 AVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFT  454 (516)
T ss_pred             HHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEe
Confidence            99999999999999985 66666655 49999999999999999999999999 99999999999964321123445799


Q ss_pred             ccCCCCCCCcChhhHHHHHHHHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecC
Q 013579          373 PFGAGRRGCPGMSFAIASVEYVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       373 ~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      |||+|+|.|+|++||++|+++++|.|+++|++++.++.+.  .....++..|+.+++|++++|.
T Consensus       455 pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        455 AFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPV--KYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             ccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcc--eeeeeeEEecCCCEEEEEEeCC
Confidence            9999999999999999999999999999999998765433  2234456778899999999874


No 21 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.4e-69  Score=517.93  Aligned_cols=415  Identities=23%  Similarity=0.389  Sum_probs=327.5

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhh-
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQ-   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~-   79 (440)
                      |++++|+.+.|+++||+++++|+.+.+..|.+++........  .|.+++ ..+|+.|+++||++ ++.|+.++++.+. 
T Consensus        53 ~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~--~~~~i~-~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~  128 (489)
T PLN02936         53 YRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL--FGSGFA-IAEGELWTARRRAV-VPSLHRRYLSVMVD  128 (489)
T ss_pred             EEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH--hcCccc-cCCchHHHHHHHhh-cCccCHHHHHHHHH
Confidence            578999999999999999999998777778766433222222  244444 45699999999997 8999998888875 


Q ss_pred             hhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           80 HVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                      +.+.++++.+++.|.+...++.++|+.+++..+++|+++.++||.+++..+      ...++.+.+......... ....
T Consensus       129 ~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~  201 (489)
T PLN02936        129 RVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNYNFDSLT------TDSPVIQAVYTALKEAET-RSTD  201 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCCCccccc------cCcHHHHHHHHHHHHHHH-hhhc
Confidence            478899999999998876567789999999999999999999999988642      122344444443322211 1223


Q ss_pred             cccchhh--hhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCC---------CCCCccHHHHHHHhhhcCCccccCC
Q 013579          160 LYPSLKW--IDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDND---------QSDKKDFVHILLQLQENGNLAIELS  228 (440)
Q Consensus       160 ~~P~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~dll~~ll~~~~~~~~~~~l~  228 (440)
                      .+|++.+  +..+.+..++..++.+.+.+++.+.++++++..+...         .....|+++.|+....      .++
T Consensus       202 ~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~------~~~  275 (489)
T PLN02936        202 LLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE------EVS  275 (489)
T ss_pred             cchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhccc------cCC
Confidence            4454321  1111123455667788888888888887665422100         0124679999886431      588


Q ss_pred             HHHHHHHHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCC
Q 013579          229 QDTIKAILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVP  308 (440)
Q Consensus       229 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~  308 (440)
                      ++++.++++.+++||+|||+++++|++++|++||++|+++|+||++++++ ..++++++++||||+|||+||||++|+++
T Consensus       276 ~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~  354 (489)
T PLN02936        276 SVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPP  354 (489)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcc
Confidence            99999999999999999999999999999999999999999999999985 45789999999999999999999999999


Q ss_pred             cccccccccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCC--CCCCCccccccCCCCCCCcChhh
Q 013579          309 LLVPRETAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTD--YRGQDFQFIPFGAGRRGCPGMSF  386 (440)
Q Consensus       309 ~~~~R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~l  386 (440)
                      ...+|.+.+|+.++||.||+||.|+++.+++||||++|+||++|+||||+.++..  ....+..++|||.|+|.|||++|
T Consensus       355 ~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~l  434 (489)
T PLN02936        355 VLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQF  434 (489)
T ss_pred             cccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHH
Confidence            9987877788888999999999999999999999999999999999999965421  12234589999999999999999


Q ss_pred             HHHHHHHHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEeec
Q 013579          387 AIASVEYVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLY  435 (440)
Q Consensus       387 a~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  435 (440)
                      |++|+++++++|+++|+++++++.+..  ...+++..|+.+++|++++|
T Consensus       435 a~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~R  481 (489)
T PLN02936        435 ALLEAIVALAVLLQRLDLELVPDQDIV--MTTGATIHTTNGLYMTVSRR  481 (489)
T ss_pred             HHHHHHHHHHHHHHhCeEEecCCCccc--eecceEEeeCCCeEEEEEee
Confidence            999999999999999999988754332  23456666777888988876


No 22 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4e-70  Score=526.61  Aligned_cols=419  Identities=32%  Similarity=0.547  Sum_probs=337.8

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhh--hhcCCcceeecCCChhHHHHHhhhhhccCCHH-HHHh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHI--LLYECKDLGNVNYGEYWRQLRKICVLELLSSK-RVQS   77 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~-~l~~   77 (440)
                      |++|+|+.++|+|+||+++++|+.++...|+.++.......  ....+.+++ ..+|+.|+.+|+++ .+.|+.. .+ .
T Consensus        37 ~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~R~~~-~~~~~~~~~~-~  113 (463)
T PF00067_consen   37 FRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRGPFGGKGLF-FSDGERWRRQRRLL-APAFSSKKIL-K  113 (463)
T ss_dssp             EEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHHHHTTTSST-TSSHHHHHHHHHHH-HHHHSHHHHH-H
T ss_pred             EEEeEecccccccccchhhccccccccccccccccccccccccccccccccc-cccccccccccccc-cccccccccc-c
Confidence            58999999999999999999999988777766544333332  122344444 45589999999997 8888888 66 8


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhh--c
Q 013579           78 AQHVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTS--F  155 (440)
Q Consensus        78 ~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  155 (440)
                      +.+.+.+.++.+++.|.+....++.+|+..+++.+++|+++.++||.+++..+    +....++.+....+...+..  .
T Consensus       114 ~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  189 (463)
T PF00067_consen  114 LEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFGKDFGSLD----DEDFEEFLEAFDELFELLSNFFW  189 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHSSHHHGTT----HHHHHHHHHHHHHHHHHHHSHHH
T ss_pred             cccccccccccccccccccccccceeeeecccccccccccccccccceeeecc----ccccccccccccccccccccccc
Confidence            99999999999999999987655689999999999999999999999988542    11233555666655543322  1


Q ss_pred             cccccccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhh-hcCCccccCCHHHHHH
Q 013579          156 CFGDLYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQ-ENGNLAIELSQDTIKA  234 (440)
Q Consensus       156 ~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~-~~~~~~~~l~~~~i~~  234 (440)
                      .+...+|++.++.  ....+...++.+.+.+++..++++++++...+ .....|+++.++.+. ..++ ...++++++.+
T Consensus       190 ~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~  265 (463)
T PF00067_consen  190 NLPFFFPWLKYLP--TPLFRRFKRARDRLRKYIKEIIEERREELDDG-DESRRDLLDSLLQASSDSDG-PSGLSDEEIAA  265 (463)
T ss_dssp             HHHHHHHHHCTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS-SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHH
T ss_pred             ccccccccccccc--cccccccccccccccccccccccccccccccc-cccccccccccccccccccc-ccccccccccc
Confidence            2344566555443  24456677788899999999999998877552 245789999999886 2221 13799999999


Q ss_pred             HHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCcccccc
Q 013579          235 ILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRE  314 (440)
Q Consensus       235 ~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~  314 (440)
                      +++.+++||+|||+.+++|++++|++||++|+++++||+++.++++.++.+++++||||+|||+|+||++|++++.++|.
T Consensus       266 ~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~  345 (463)
T PF00067_consen  266 ELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRV  345 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999987778999999999999999999999999999777899


Q ss_pred             cccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHH
Q 013579          315 TAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYV  394 (440)
Q Consensus       315 ~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~  394 (440)
                      +.+|++++||.|||||.|.++.+++|+||++|+||++|+||||++.+.........|+|||.|+|.|||++||..|++++
T Consensus       346 ~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~  425 (463)
T PF00067_consen  346 ATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVF  425 (463)
T ss_dssp             ESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999886522346778999999999999999999999999


Q ss_pred             HHHHHhcceeecCCCcccCccccc-CccccccCCeeEE
Q 013579          395 VANLLYWFDWKLPFGVVLDMTEAS-GVTLQRKSPLHVV  431 (440)
Q Consensus       395 ~~~ll~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~  431 (440)
                      +|.||++|+|+++++.+....... +++.+| .+++|.
T Consensus       426 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  462 (463)
T PF00067_consen  426 LAKLLRRFDFELVPGSEPEPQEQQNGFLLPP-KPLKVK  462 (463)
T ss_dssp             HHHHHHHEEEEESTTSSGGEEECSCSSSEEE-SSSEEE
T ss_pred             HHHHHHhCEEEECCCCCCCCccccCceEeeC-CCcEEe
Confidence            999999999999776522222222 445444 466664


No 23 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=6.2e-69  Score=515.19  Aligned_cols=405  Identities=22%  Similarity=0.250  Sum_probs=319.2

Q ss_pred             EEeccHHHHHHHHHHcCCcccCCCCch-hhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhh--hhhHHHHHH
Q 013579           11 LVVSSAELASQVMKTHDIAFSNRPKTI-AAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSA--QHVRVEEVS   87 (440)
Q Consensus        11 vvi~dp~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~--~~~i~~~~~   87 (440)
                      |+++||+++++|+.++...|.+..... ....+  .|.++ ++.+|+.|+++||++ ++.|+.++++.+  ++.+.+.++
T Consensus        86 iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~--~g~gi-~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~  161 (502)
T PLN02426         86 TITANPENVEYMLKTRFDNYPKGKPFSAILGDL--LGRGI-FNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIES  161 (502)
T ss_pred             EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh--cCCce-eecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHH
Confidence            899999999999998766776543321 11222  25554 556699999999997 999999998886  367778888


Q ss_pred             HHHHHHHHhccC--CceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccccccchh
Q 013579           88 CLINKIRRSCLN--GGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDLYPSLK  165 (440)
Q Consensus        88 ~l~~~l~~~~~~--~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~  165 (440)
                      .+++.|.+.++.  +.++|+.++++.+++|+++.++||.+++.++.   .....++.+.+..+...... .....+|+++
T Consensus       162 ~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  237 (502)
T PLN02426        162 RLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLEL---SLPISEFADAFDTASKLSAE-RAMAASPLLW  237 (502)
T ss_pred             HHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCC---CCCccHHHHHHHHHHHHHHH-HHhcchhHHH
Confidence            899888776432  46799999999999999999999999876531   11233455555544332211 1112234333


Q ss_pred             hhh-hh-hchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHHhhcC
Q 013579          166 WID-VL-TGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDMFVGG  243 (440)
Q Consensus       166 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag  243 (440)
                      ++. .+ .+..++..++.+.+.+++.++|+++++...    ....|+++.+++..        .+++++.+++.++++||
T Consensus       238 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~----~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG  305 (502)
T PLN02426        238 KIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF----SASKDLLSRFMASI--------NDDKYLRDIVVSFLLAG  305 (502)
T ss_pred             HHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc----CCcchHHHHHHhcC--------CCHHHHHHHHHHHHHhc
Confidence            221 11 133466778888999999999998876421    23569999999752        35789999999999999


Q ss_pred             chhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC-CcccccccCCchhHHHHHHHHhcccCCCCcccccccccceee-
Q 013579          244 TDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGK-LNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAESVKL-  321 (440)
Q Consensus       244 ~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~-~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~~~i-  321 (440)
                      +|||+++|+|++|+|++||++|+|+++||+++++++ ..++++++++||||+|||+|+||++||+|... |.+.+|.++ 
T Consensus       306 ~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~  384 (502)
T PLN02426        306 RDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLP  384 (502)
T ss_pred             cchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcC
Confidence            999999999999999999999999999999998754 36799999999999999999999999999875 999988777 


Q ss_pred             CCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHHHHHHh
Q 013579          322 NGYDIPAKTRVFVNGWAIQRDPKEW-DRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVANLLY  400 (440)
Q Consensus       322 ~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~  400 (440)
                      +|+.|||||.|.++.|++||||++| +||++|+||||++++......+..++|||+|+|.|+|++||.+|++++++.|++
T Consensus       385 ~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~  464 (502)
T PLN02426        385 DGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVR  464 (502)
T ss_pred             CCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999 999999999999743111223457999999999999999999999999999999


Q ss_pred             cceeecCCCcccCcccccCccccccCCeeEEEeecC
Q 013579          401 WFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      +|+++++++.+.......+++..|+.+++|++++|.
T Consensus       465 ~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        465 RFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             HceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            999998654322223345688899999999999885


No 24 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=8.2e-69  Score=516.77  Aligned_cols=397  Identities=21%  Similarity=0.321  Sum_probs=307.1

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHh-hh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQS-AQ   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~-~~   79 (440)
                      |++|+|+.++|+++||+++++|+.+++..|..+....... +.  |...++..+|+.|+++||++ .+.|+..+++. +.
T Consensus        79 ~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~~~-~~--g~~~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~  154 (490)
T PLN02500         79 YRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGG-IL--GKWSMLVLVGDMHRDMRSIS-LNFLSHARLRTHLL  154 (490)
T ss_pred             ccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHHHH-Hh--CcccccccCCHHHHHHHHHH-HHhcChHHHHHHHH
Confidence            5789999999999999999999998877775443222222 22  22233344699999999997 79999998887 56


Q ss_pred             hhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           80 HVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                      +.+.+.+..+++.|.    .+..+|+.+.+..+++|++++++||.+.+..       ...++......+......  ...
T Consensus       155 ~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~-------~~~~~~~~~~~~~~~~~~--~~~  221 (490)
T PLN02500        155 KEVERHTLLVLDSWK----ENSTFSAQDEAKKFTFNLMAKHIMSMDPGEE-------ETEQLKKEYVTFMKGVVS--APL  221 (490)
T ss_pred             HHHHHHHHHHHHHhC----CCCCEEehHHHHHHHHHHHHHHHhCCCCCch-------HHHHHHHHHHHHHhhhhc--chh
Confidence            777777777777764    3457999999999999999999999875422       222333333222221110  111


Q ss_pred             cccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHH
Q 013579          160 LYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDND-QSDKKDFVHILLQLQENGNLAIELSQDTIKAILMD  238 (440)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  238 (440)
                      .+|..        ..++..++.+.+.+++.+.+++++++.+.+. .....|+++.+++.       ..++++++.+++.+
T Consensus       222 ~~p~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~  286 (490)
T PLN02500        222 NFPGT--------AYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH-------SNLSTEQILDLILS  286 (490)
T ss_pred             cCCCc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHH
Confidence            12221        1234455677888888888888776543211 12346899999873       15899999999999


Q ss_pred             HhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhc-----CCCcccccccCCchhHHHHHHHHhcccCCCCccccc
Q 013579          239 MFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLK-----GKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPR  313 (440)
Q Consensus       239 ~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~-----~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R  313 (440)
                      +++||+|||+++++|++++|++||++|+|+|+|++++++     +++.++++++++|||++|||+|+||++|++|+. +|
T Consensus       287 ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R  365 (490)
T PLN02500        287 LLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HR  365 (490)
T ss_pred             HHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-ee
Confidence            999999999999999999999999999999999999874     234589999999999999999999999999986 69


Q ss_pred             ccccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCC------CCCccccccCCCCCCCcChhhH
Q 013579          314 ETAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYR------GQDFQFIPFGAGRRGCPGMSFA  387 (440)
Q Consensus       314 ~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~la  387 (440)
                      .+.+|++++||.|||||.|.++.|++||||++|+||++|+||||+++++..+      ..+..|+|||.|+|.|+|++||
T Consensus       366 ~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A  445 (490)
T PLN02500        366 KALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELA  445 (490)
T ss_pred             EeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHH
Confidence            9999999999999999999999999999999999999999999997542211      1356799999999999999999


Q ss_pred             HHHHHHHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEee
Q 013579          388 IASVEYVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTL  434 (440)
Q Consensus       388 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  434 (440)
                      .+|+++++|+||++|+|++.++... ..  ...+..| .++.|++++
T Consensus       446 ~~el~~~la~ll~~f~~~~~~~~~~-~~--~~~~~~~-~~l~~~~~~  488 (490)
T PLN02500        446 KLEMAVFIHHLVLNFNWELAEADQA-FA--FPFVDFP-KGLPIRVRR  488 (490)
T ss_pred             HHHHHHHHHHHHhccEEEEcCCCcc-ee--cccccCC-CCceEEEEe
Confidence            9999999999999999998776421 11  1223334 588888764


No 25 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.7e-66  Score=496.76  Aligned_cols=392  Identities=20%  Similarity=0.245  Sum_probs=307.6

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHh-hh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQS-AQ   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~-~~   79 (440)
                      |++|+|+.++|+|+||+++++|+.++...|..+....... +.  |.+.+++.+|+.|+++|+++ .++|++..++. +.
T Consensus        67 ~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~-~l--g~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~  142 (463)
T PLN02774         67 FKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD-IL--GTCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLL  142 (463)
T ss_pred             ccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH-Hh--CccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHH
Confidence            6789999999999999999999987776664332222222 22  33344455799999999998 88999999886 68


Q ss_pred             hhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           80 HVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                      +.+.+.++++++.|.    .++++|+.+.+..+++++++.++||.+.+.        ...++..   .+.......   .
T Consensus       143 ~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~--------~~~~~~~---~~~~~~~~~---~  204 (463)
T PLN02774        143 PKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALKQIAGTLSKP--------ISEEFKT---EFFKLVLGT---L  204 (463)
T ss_pred             HHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHHHHcCCCChH--------HHHHHHH---HHHHHhccc---c
Confidence            888888888888774    345799999999999999999999976432        1122222   222211110   0


Q ss_pred             cccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHH
Q 013579          160 LYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDM  239 (440)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~  239 (440)
                      .+|.  +++.  ...++..++.+.+.+++.+.+++++++.     ....|+++.+++...++   ..++++++.+++.++
T Consensus       205 ~~~~--~lp~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~~d~l~~ll~~~~~~---~~~s~~ei~~~~~~l  272 (463)
T PLN02774        205 SLPI--DLPG--TNYRSGVQARKNIVRMLRQLIQERRASG-----ETHTDMLGYLMRKEGNR---YKLTDEEIIDQIITI  272 (463)
T ss_pred             cCCc--CCCC--hhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCcccHHHHHHhCccCC---CCCCHHHHHHHHHHH
Confidence            1121  1110  1234555677888889999998876542     23569999999743322   258999999999999


Q ss_pred             hhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC---CCcccccccCCchhHHHHHHHHhcccCCCCcccccccc
Q 013579          240 FVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKG---KLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETA  316 (440)
Q Consensus       240 ~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~---~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~  316 (440)
                      ++||+|||+++++|++++|++||++|+|+++|++++++.   ++.++++++++||||+|||+|+||++|+++.. +|.+.
T Consensus       273 l~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~  351 (463)
T PLN02774        273 LYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTT  351 (463)
T ss_pred             HHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccC
Confidence            999999999999999999999999999999999999863   35689999999999999999999999999866 59999


Q ss_pred             cceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHHH
Q 013579          317 ESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVA  396 (440)
Q Consensus       317 ~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~  396 (440)
                      +|++++||.||||+.|.++.|++||||++|+||++|+||||++++.  + ....++|||+|+|.|||++||.+|+++++|
T Consensus       352 ~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~--~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la  428 (463)
T PLN02774        352 QDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL--E-SHNYFFLFGGGTRLCPGKELGIVEISTFLH  428 (463)
T ss_pred             CCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc--C-CCccccCcCCCCCcCCcHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999997542  1 123699999999999999999999999999


Q ss_pred             HHHhcceeecCCCcccCcccccCccccccCCeeEEEee
Q 013579          397 NLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTL  434 (440)
Q Consensus       397 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  434 (440)
                      .||++|+|++.++.+.  ....  ++.|+.++.|++++
T Consensus       429 ~Ll~~f~~~~~~~~~~--~~~~--~~~p~~g~~~~~~~  462 (463)
T PLN02774        429 YFVTRYRWEEVGGDKL--MKFP--RVEAPNGLHIRVSP  462 (463)
T ss_pred             HHHHhceEEECCCCcc--ccCC--CCCCCCCceEEeee
Confidence            9999999999776421  1111  33367888898875


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=2.7e-66  Score=494.23  Aligned_cols=396  Identities=20%  Similarity=0.276  Sum_probs=310.9

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhh-h
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSA-Q   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~-~   79 (440)
                      |++|+|+.++|+++||+++++++.+++..|..+... ....+.  |.+.++..+|+.|+++|+++ ++.|+..+++.+ .
T Consensus        48 ~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~-~~~~l~--g~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~  123 (452)
T PLN03141         48 FKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK-SLTELM--GKSSILLINGSLQRRVHGLI-GAFLKSPHLKAQIT  123 (452)
T ss_pred             eeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch-hHHHHh--CcccccccCcHHHHHHHHHH-HHhcCcHHHHHHHH
Confidence            689999999999999999999999888777655322 222222  33345555799999999997 888887777653 5


Q ss_pred             hhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           80 HVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                      +.+.+.++.+++.|.    +++++|+.+.+..++++++++++||.+.+.        ...++......+......  +..
T Consensus       124 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~vi~~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~--~~~  189 (452)
T PLN03141        124 RDMERYVSESLDSWR----DDPPVLVQDETKKIAFEVLVKALISLEPGE--------EMEFLKKEFQEFIKGLMS--LPI  189 (452)
T ss_pred             HHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHHHHHHHHHcCCCchH--------HHHHHHHHHHHHhhhHHh--Ccc
Confidence            566666666665543    456899999999999999999999976542        222333333322221111  111


Q ss_pred             cccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC---CCCccHHHHHHHhhhcCCccccCCHHHHHHHH
Q 013579          160 LYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQ---SDKKDFVHILLQLQENGNLAIELSQDTIKAIL  236 (440)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~  236 (440)
                      .+|..        ...+..++.+.+.+++.++|+++++....+..   ....|+++.++.+..     ..++++++.+++
T Consensus       190 ~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-----~~l~~~~i~~~~  256 (452)
T PLN03141        190 KLPGT--------RLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGS-----DELTDDLISDNM  256 (452)
T ss_pred             CCCch--------HhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcCC-----CCCCHHHHHHHH
Confidence            12211        12334467888999999999888765432100   124689999987542     258999999999


Q ss_pred             HHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhc----CCCcccccccCCchhHHHHHHHHhcccCCCCcccc
Q 013579          237 MDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLK----GKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVP  312 (440)
Q Consensus       237 ~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~----~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~  312 (440)
                      +.+++||+|||+.+++|++++|++||++|+++++|++++.+    .++.++++++.+||||+|||+|+||++|+++.. +
T Consensus       257 ~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~  335 (452)
T PLN03141        257 IDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-M  335 (452)
T ss_pred             HHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-c
Confidence            99999999999999999999999999999999999998864    244578999999999999999999999999854 7


Q ss_pred             cccccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHH
Q 013579          313 RETAESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVE  392 (440)
Q Consensus       313 R~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~  392 (440)
                      |.+.+|++++||.||||+.|.++.|++||||++|+||++|+||||++++.    .+..|+|||+|+|.|+|++||.+|++
T Consensus       336 R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~  411 (452)
T PLN03141        336 RKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEAS  411 (452)
T ss_pred             eeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999997532    35679999999999999999999999


Q ss_pred             HHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecCC
Q 013579          393 YVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYSP  437 (440)
Q Consensus       393 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  437 (440)
                      +++|.|+++|+|+..++...     ...++.|+.++.|++++|.+
T Consensus       412 ~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        412 IFLHHLVTRFRWVAEEDTIV-----NFPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             HHHHHHHhcCeeecCCCCee-----ecccccCCCCceEEEEeCCC
Confidence            99999999999998765311     22577888999999999854


No 27 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.2e-65  Score=490.56  Aligned_cols=388  Identities=21%  Similarity=0.308  Sum_probs=312.1

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+++||+++++|+.++...|  ++......... .|...++..+|+.|+++||++ .+.|++++++.+.+
T Consensus        72 ~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~--~~~~~~~~~~~-~g~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~  147 (463)
T PLN02196         72 FKTHVLGCPCVMISSPEAAKFVLVTKSHLF--KPTFPASKERM-LGKQAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVP  147 (463)
T ss_pred             heeeecCCceEEEcCHHHHHHHHhCCCCcc--cccCchHHHHH-cCcccccccCcHHHHHHHHHH-HHhcChHHHHHHHH
Confidence            578999999999999999999999877666  33332222212 244445556799999999998 89999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhcccccc
Q 013579           81 VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDL  160 (440)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (440)
                      .+.++++++++.|.     ++++|+.+++..+++|+++.++||.+...        ....+......+..      ....
T Consensus       148 ~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~~fG~~~~~--------~~~~~~~~~~~~~~------~~~~  208 (463)
T PLN02196        148 DIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALLSIFGKDEVL--------YREDLKRCYYILEK------GYNS  208 (463)
T ss_pred             HHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHHHcCCCCch--------HHHHHHHHHHHHhc------chhc
Confidence            99999999998773     45799999999999999999999987532        11122222211111      1112


Q ss_pred             ccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHHh
Q 013579          161 YPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDMF  240 (440)
Q Consensus       161 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  240 (440)
                      +|+.  ++  ....++..++...+.+++.+.+++++++.     .++.|+++.+++.   +   ..++++++.++++.++
T Consensus       209 ~~~~--~p--~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-----~~~~d~l~~ll~~---~---~~l~~~ei~~~~~~~~  273 (463)
T PLN02196        209 MPIN--LP--GTLFHKSMKARKELAQILAKILSKRRQNG-----SSHNDLLGSFMGD---K---EGLTDEQIADNIIGVI  273 (463)
T ss_pred             cccc--CC--CccchHHHHHHHHHHHHHHHHHHHHhhcC-----CCcccHHHHHHhc---C---CCCCHHHHHHHHHHHH
Confidence            2321  11  01234566777888889998888876542     2356899988853   1   2589999999999999


Q ss_pred             hcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC---CCcccccccCCchhHHHHHHHHhcccCCCCccccccccc
Q 013579          241 VGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKG---KLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAE  317 (440)
Q Consensus       241 ~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~---~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~  317 (440)
                      +||+|||+.+++|++++|++||++|+++++|++++.+.   ++.+++++++++|||+|||+|+||++|++++.. |.+.+
T Consensus       274 ~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~  352 (463)
T PLN02196        274 FAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVE  352 (463)
T ss_pred             HhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeecc
Confidence            99999999999999999999999999999999999864   456899999999999999999999999999985 99999


Q ss_pred             ceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHHHH
Q 013579          318 SVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVAN  397 (440)
Q Consensus       318 ~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~  397 (440)
                      |+.++||.|||||.|+++.+++||||++|+||++|+||||+++.     .+..++|||.|+|.|+|+++|++|+++++|.
T Consensus       353 d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~  427 (463)
T PLN02196        353 DVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHH  427 (463)
T ss_pred             ccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999642     3457999999999999999999999999999


Q ss_pred             HHhcceeecCCCcccCcccccCccccccCCeeEEEeec
Q 013579          398 LLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLY  435 (440)
Q Consensus       398 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  435 (440)
                      |+++|+|++.++. ...  ....+..|+.++.|+++++
T Consensus       428 ll~~f~~~~~~~~-~~~--~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        428 LTTKYRWSIVGTS-NGI--QYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             HHHhcEEEEcCCC-Cce--EEcccccCCCCceEEEecC
Confidence            9999999987653 222  2343456888999998865


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.1e-64  Score=490.26  Aligned_cols=399  Identities=21%  Similarity=0.291  Sum_probs=312.5

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccC-CHHHHHhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELL-SSKRVQSAQ   79 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~f-s~~~l~~~~   79 (440)
                      |++++|+.+.|+++||+++++|+.++ ..|.++....... .  .|...+.+.+|+.|+++||.+ .+.| ++++++.+.
T Consensus        85 ~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~~~~-~--~g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~  159 (490)
T PLN02302         85 YKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPESTVE-L--IGRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYI  159 (490)
T ss_pred             eeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCchhHHH-H--hccccccccCcHHHHHHHHHH-HhccCCHHHHHHHH
Confidence            46789999999999999999999865 4555443222222 1  134444556799999999997 7777 578899999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           80 HVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                      +.+.+.++++++.+..    ++.+|+.+.+..++++++++++||.+++..        ...+.+....+...+..  ...
T Consensus       160 ~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~~~vi~~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~--~~~  225 (490)
T PLN02302        160 PYIEENVKSCLEKWSK----MGEIEFLTELRKLTFKIIMYIFLSSESELV--------MEALEREYTTLNYGVRA--MAI  225 (490)
T ss_pred             HHHHHHHHHHHHHhcC----CCCEehHHHHHHHHHHHHHHHHcCCCChHH--------HHHHHHHHHHHHHHhhh--CCc
Confidence            9999999999998853    346999999999999999999999876531        22222222211111111  111


Q ss_pred             cccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHH
Q 013579          160 LYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDM  239 (440)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~  239 (440)
                      .+|..        ...+..++.+.+.+++.+.++++++....+...+..|+++.++++.++++  ..++++++.++++.+
T Consensus       226 ~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~  295 (490)
T PLN02302        226 NLPGF--------AYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAEDENG--RKLDDEEIIDLLLMY  295 (490)
T ss_pred             CCCch--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhccCC--CCCCHHHHHHHHHHH
Confidence            12221        12233456677888888888888765432212345799999998654322  358999999999999


Q ss_pred             hhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC----CcccccccCCchhHHHHHHHHhcccCCCCccccccc
Q 013579          240 FVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGK----LNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRET  315 (440)
Q Consensus       240 ~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~----~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~  315 (440)
                      ++||+|||+.+++|++++|++||++|+|+++|++++++..    ..++++++++||||+|||+|+||++|+++.. +|.+
T Consensus       296 ~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~  374 (490)
T PLN02302        296 LNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREA  374 (490)
T ss_pred             HHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcc
Confidence            9999999999999999999999999999999999998642    1378999999999999999999999999986 5999


Q ss_pred             ccceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHH
Q 013579          316 AESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVV  395 (440)
Q Consensus       316 ~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~  395 (440)
                      .+|++++||.||||+.|.++.+++||||++|+||++|+||||++..    ..+..++|||.|+|.|+|++||..|+++++
T Consensus       375 ~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~l  450 (490)
T PLN02302        375 KTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFL  450 (490)
T ss_pred             cCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999753    244579999999999999999999999999


Q ss_pred             HHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecC
Q 013579          396 ANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYS  436 (440)
Q Consensus       396 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  436 (440)
                      +.++++|+|++.++. .+..  ......|+.++.+++++|.
T Consensus       451 a~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~~  488 (490)
T PLN02302        451 HHFLLGYRLERLNPG-CKVM--YLPHPRPKDNCLARITKVA  488 (490)
T ss_pred             HHHHhcCeeEEcCCC-Ccce--eCCCCCCCCCceEEEEecc
Confidence            999999999987653 1222  2233677888899998775


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.6e-63  Score=472.71  Aligned_cols=394  Identities=18%  Similarity=0.249  Sum_probs=304.3

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++|+|+.++|+|+||+++++++.++...|.+++.......+  ++.++++ .+|+.|+++||++ .++++.+.++.+..
T Consensus        71 ~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~l--g~~~l~~-~~g~~wr~~R~~~-~~f~~~~~~~~~~~  146 (472)
T PLN02987         71 FMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLL--GKHSLLL-MKGNLHKKMHSLT-MSFANSSIIKDHLL  146 (472)
T ss_pred             hhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHHHHh--Ccccccc-cCcHHHHHHHHHH-HHhcChHHHHHHHH
Confidence            578899999999999999999999888778655432222222  2234444 4699999999996 56555555554431


Q ss_pred             -hHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           81 -VRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        81 -~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                       .+.+.++..++.|      ++++++.+.+..++++++++++||.+.+..        .+.+...........    ...
T Consensus       147 ~~~~~~~~~~~~~~------~~~v~~~~~~~~~t~~vi~~~~fg~~~~~~--------~~~~~~~~~~~~~~~----~~~  208 (472)
T PLN02987        147 LDIDRLIRFNLDSW------SSRVLLMEEAKKITFELTVKQLMSFDPGEW--------TESLRKEYVLVIEGF----FSV  208 (472)
T ss_pred             HHHHHHHHHHHHhh------ccceehHHHHHHHHHHHHHHHHcCCCChHH--------HHHHHHHHHHHHhhh----hcC
Confidence             1222333333333      136999999999999999999999765421        122222222221111    122


Q ss_pred             cccchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHH
Q 013579          160 LYPSLKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDM  239 (440)
Q Consensus       160 ~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~  239 (440)
                      .+|++.      +..++..++.+.+.+++.++++++++....+ .....|+++.+++..      ..++++++.++++.+
T Consensus       209 ~~p~l~------~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l  275 (472)
T PLN02987        209 PLPLFS------TTYRRAIQARTKVAEALTLVVMKRRKEEEEG-AEKKKDMLAALLASD------DGFSDEEIVDFLVAL  275 (472)
T ss_pred             CCcCCC------chHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CcccccHHHHHHhcC------CCCCHHHHHHHHHHH
Confidence            345431      2345667788899999999999987654321 123579999999752      158999999999999


Q ss_pred             hhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhc---CCCcccccccCCchhHHHHHHHHhcccCCCCcccccccc
Q 013579          240 FVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLK---GKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETA  316 (440)
Q Consensus       240 ~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~---~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~  316 (440)
                      ++||+|||+.+++|++++|++||++|+++++|++++.+   ++..++++++.+|||++||++|+||++|+++.. +|.+.
T Consensus       276 ~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~  354 (472)
T PLN02987        276 LVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAM  354 (472)
T ss_pred             HHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCC
Confidence            99999999999999999999999999999999999875   234578999999999999999999999999865 69999


Q ss_pred             cceeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHHH
Q 013579          317 ESVKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVA  396 (440)
Q Consensus       317 ~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~  396 (440)
                      +|++++||.|||||.|.++.+++||||++|+||++|+||||++++.. ......++|||.|+|.|||++||..|++++++
T Consensus       355 ~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la  433 (472)
T PLN02987        355 TDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLH  433 (472)
T ss_pred             CCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999975432 12345799999999999999999999999999


Q ss_pred             HHHhcceeecCCCcccCcccccCccccccCCeeEEEeec
Q 013579          397 NLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLY  435 (440)
Q Consensus       397 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  435 (440)
                      .|+++|+|+++++.+.    ....++.|..++.+++++|
T Consensus       434 ~ll~~f~~~~~~~~~~----~~~~~~~p~~~~~~~~~~r  468 (472)
T PLN02987        434 RLVTRFSWVPAEQDKL----VFFPTTRTQKRYPINVKRR  468 (472)
T ss_pred             HHHhceEEEECCCCce----eecccccCCCCceEEEEec
Confidence            9999999998765422    2244778888899999987


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.2e-59  Score=409.21  Aligned_cols=408  Identities=21%  Similarity=0.336  Sum_probs=322.7

Q ss_pred             CeEeecCccEEEeccHHHHHHHHHHcCCcccCCCCchhhhhhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhh
Q 013579            1 MYVYFGNTPSLVVSSAELASQVMKTHDIAFSNRPKTIAAHILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQH   80 (440)
Q Consensus         1 f~~~~g~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~   80 (440)
                      |++.++|+.+-++.+|+....++........-. .....-.....|++++.........++.+++ ...+...+++.+.+
T Consensus        68 FTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~-~~~~~l~~~vFg~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e  145 (486)
T KOG0684|consen   68 FTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFE-EAYSKLTTPVFGKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVE  145 (486)
T ss_pred             EEEEEcCcEEEEEeCchhhHHHHcCcccccCHH-HHHHHhhhhhcCCCccccCCCchHHHHHHHH-HHHhchhhHHHHHH
Confidence            789999999999999999999998653333211 1111111112367777666677788888887 67778889999999


Q ss_pred             hHHHHHHHHHHH-HHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccc
Q 013579           81 VRVEEVSCLINK-IRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGD  159 (440)
Q Consensus        81 ~i~~~~~~l~~~-l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (440)
                      .|.+++...++. |.+   +|..-.+...+..+.+.+.-.++||+.-...        +++......++.....  .+..
T Consensus       146 ~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~~--------d~~~a~l~~dLd~~F~--~~d~  212 (486)
T KOG0684|consen  146 LMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLLGGEVRDQL--------DADVAKLYHDLDQGFQ--PFDF  212 (486)
T ss_pred             HHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhhhhhhhhhh--------cchHHHHHHHHhcccc--chHh
Confidence            999999998887 433   4555567777777777777777777765543        2233344444444332  2445


Q ss_pred             cccc-hhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHH
Q 013579          160 LYPS-LKWIDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMD  238 (440)
Q Consensus       160 ~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~  238 (440)
                      .||. +..     +..++..++.+.+.+.+...+.++++..+    ....|+++.+++-.+++.   ..+++|+...++.
T Consensus       213 ~FP~~LP~-----~~~r~~~ra~~~i~k~f~~~i~~rr~s~s----~~~~dmlq~l~~~y~dg~---~~te~e~a~~li~  280 (486)
T KOG0684|consen  213 LFPYNLPI-----PLLRRRDRARKKISKIFSKIILDRRASIS----KWDNDMLQSLMEKYKDGR---PTTEEEIAGLLIG  280 (486)
T ss_pred             hcccCCCc-----chhhhHHHHHHHHHHHHHHHHHHHHhccc----cccHHHHHHHHHHhhcCC---cCcHHHHHHHHHH
Confidence            6773 322     33455568899999999999999988752    245689999998555554   7999999999999


Q ss_pred             HhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCc-ccccccCCchhHHHHHHHHhcccCCCCccccccccc
Q 013579          239 MFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLN-IDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAE  317 (440)
Q Consensus       239 ~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~-~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~  317 (440)
                      +++||+.||+.|.+|++++|++|||+++.+++|+++++|++.. ++++++++||.|+.||+|||||+||.+..+ |.+.+
T Consensus       281 ~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~  359 (486)
T KOG0684|consen  281 LLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHE  359 (486)
T ss_pred             HHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHH-Hhhcc
Confidence            9999999999999999999999999999999999999998655 899999999999999999999999999887 99999


Q ss_pred             ceeeCC----eeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCC--CC--CCccccccCCCCCCCcChhhHHH
Q 013579          318 SVKLNG----YDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDY--RG--QDFQFIPFGAGRRGCPGMSFAIA  389 (440)
Q Consensus       318 ~~~i~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~--~~--~~~~~~~Fg~G~r~C~G~~la~~  389 (440)
                      |.++.+    |.||+|.+|.++.+.+|+||++|+||+.|+|+||+++++..  .+  -+..|||||+|.|.|||++||.+
T Consensus       360 D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~  439 (486)
T KOG0684|consen  360 DLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYL  439 (486)
T ss_pred             ceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHH
Confidence            999865    99999999999999999999999999999999999766432  12  23456999999999999999999


Q ss_pred             HHHHHHHHHHhcceeecCCCcccCcccccCccccccCCeeEEEeecCC
Q 013579          390 SVEYVVANLLYWFDWKLPFGVVLDMTEASGVTLQRKSPLHVVPTLYSP  437 (440)
Q Consensus       390 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  437 (440)
                      |+|.++..+|+.||+++.++. .+.......+..|+.+++|+.++|+.
T Consensus       440 eIk~~~~l~L~~fdleLid~~-~P~~d~s~~v~~P~g~v~irYK~R~~  486 (486)
T KOG0684|consen  440 EIKQFISLLLRHFDLELIDGP-FPEVDYSRMVMQPEGDVRIRYKRRPL  486 (486)
T ss_pred             HHHHHHHHHHHHcceeecCCC-CCCCCHHHhhcCCCCCceEEEeecCC
Confidence            999999999999999999964 22222233478899999999998863


No 31 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.1e-56  Score=417.45  Aligned_cols=360  Identities=26%  Similarity=0.370  Sum_probs=290.0

Q ss_pred             cEEEeccHHHHHHHHHHcCCcccCCCCchhhh--hhhcCCcceeecCCChhHHHHHhhhhhccCCHHHHHhhhhhHHHHH
Q 013579            9 PSLVVSSAELASQVMKTHDIAFSNRPKTIAAH--ILLYECKDLGNVNYGEYWRQLRKICVLELLSSKRVQSAQHVRVEEV   86 (440)
Q Consensus         9 ~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~Rr~~~~~~fs~~~l~~~~~~i~~~~   86 (440)
                      .++++++|+++++++.+.. .+++........  .....|...++..+|+.|+++||++ ++.|+++.++.+.+.+.+.+
T Consensus        49 ~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl~-~~~F~~~~~~~~~~~i~~~~  126 (411)
T COG2124          49 GFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLL-APAFTPRALRGYRPLIREIA  126 (411)
T ss_pred             eEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHHHHh-ccccCHHHHHHHHHHHHHHH
Confidence            3899999999999998653 122221111110  1112244546667799999999997 99999999999999999999


Q ss_pred             HHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHHHHHHhhhhccccccccchhh
Q 013579           87 SCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTRRQMMLMTSFCFGDLYPSLKW  166 (440)
Q Consensus        87 ~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~  166 (440)
                      +++++.+ .   .+..+++.+....+++++|+ .+||.+.+..         ..+...........      .  |....
T Consensus       127 ~~~~~~~-~---~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~---------~~~~~~~~~~~~~~------~--~~~~~  184 (411)
T COG2124         127 DRLLDDL-W---QGGADLVLDFAAELTLRVIA-ELLGVPLEDR---------PQLLRWSDALLLRL------D--PDLGP  184 (411)
T ss_pred             HHHHHhc-c---cCCchhHHHHhhhhhHHHHH-HHhCCCHHHH---------HHHHHHHHHHHhcc------C--cccCC
Confidence            9999998 3   23788899999999999999 9999987632         22323222222210      0  21111


Q ss_pred             hhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCCccccCCHHHHHHHHHHHhhcCchh
Q 013579          167 IDVLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGNLAIELSQDTIKAILMDMFVGGTDT  246 (440)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~t  246 (440)
                          .....+..++...+.+++..+|++++.       ....|+++.|+.+..+++  ..++++||.++++++++||+||
T Consensus       185 ----~~~~~~~~~a~~~~~~~~~~li~~rR~-------~~~~dlls~l~~a~~~~~--~~lsd~Ei~~~~~~ll~AGheT  251 (411)
T COG2124         185 ----EEPWRRARAARRELDAYLRALIAERRA-------APRDDLLSLLLSAEDDGG--GRLSDDEIRDELITLLVAGHET  251 (411)
T ss_pred             ----cccHHHHHHHHHHHHHHHHHHHHHhcc-------CCcccHHHHHHHHhhCCC--CcCCHHHHHHHHHHHHHhhhHH
Confidence                123456778899999999999999983       456799999998877653  2599999999999999999999


Q ss_pred             hHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCcccccccCCchhHHHHHHHHhcccCCCCcccccccccceeeCCeee
Q 013579          247 TATALEWVMAELLKDPRIMKRAQEEVRGVLKGKLNIDMKDIDKMDYIKCVIKETLRLHAPVPLLVPRETAESVKLNGYDI  326 (440)
Q Consensus       247 t~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~~~i~g~~i  326 (440)
                      |+++|+|++|.|++||++++++++|.+.                ||++++++|+||++||++. ++|.+.+|++++|+.|
T Consensus       252 Ta~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~I  314 (411)
T COG2124         252 TANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRI  314 (411)
T ss_pred             HHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEe
Confidence            9999999999999999999999998544                8999999999999999999 6799999999999999


Q ss_pred             CCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChhhHHHHHHHHHHHHHhcceeec
Q 013579          327 PAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMSFAIASVEYVVANLLYWFDWKL  406 (440)
Q Consensus       327 p~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~~~ll~~~~~~~  406 (440)
                      |||+.|.++.+++||||++|++|++|||+||.          ..|+|||+|+|.|+|..||++|++++++.||++|++..
T Consensus       315 p~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~  384 (411)
T COG2124         315 PAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLL  384 (411)
T ss_pred             CCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhh
Confidence            99999999999999999999999999999998          25899999999999999999999999999999999877


Q ss_pred             CCCcccCcccccCccccccCCeeEEEeec
Q 013579          407 PFGVVLDMTEASGVTLQRKSPLHVVPTLY  435 (440)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  435 (440)
                      ..+ .  .......+..+..+..+.++.+
T Consensus       385 ~~~-~--~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         385 LAE-P--PPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             cCC-C--CCccccccccCCCcceeeeecC
Confidence            665 1  1223445556666777777654


No 32 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.3e-55  Score=414.02  Aligned_cols=370  Identities=18%  Similarity=0.235  Sum_probs=263.5

Q ss_pred             CeEeecCccE-------EEeccHHHHHHHHHH----cCCcccCCCCchhhhhhhcCCcc---eeecCCChhHHHHHhhhh
Q 013579            1 MYVYFGNTPS-------LVVSSAELASQVMKT----HDIAFSNRPKTIAAHILLYECKD---LGNVNYGEYWRQLRKICV   66 (440)
Q Consensus         1 f~~~~g~~~~-------vvi~dp~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~w~~~Rr~~~   66 (440)
                      |+++++|.|+       |+++||++++.|+.+    +...|..... .... +.  |..   .++..+|+.|+++||++ 
T Consensus        59 fk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~~~~~~~~-~~~~-l~--G~~~~~s~~~~~g~~H~r~Rrll-  133 (480)
T PLN02648         59 FRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRDVFTGTYM-PSTA-FT--GGYRVLSYLDPSEPKHAKLKSFL-  133 (480)
T ss_pred             EEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccccceeeec-cCcc-cc--CCceeeeecCCCCchHHHHHHHH-
Confidence            6788888666       999999999999975    3333433211 1222 22  433   45556799999999997 


Q ss_pred             hccCCHHHHHhhhhhHHHHHHHHHHHHHHhccCCceeeHHHHHHHHHHHHHHHHHhccccccccCCCCCCccchHHHHHH
Q 013579           67 LELLSSKRVQSAQHVRVEEVSCLINKIRRSCLNGGAINLSEMLLAVSNNIASRCVFGRKVEEEEGGGRGNGGSKFGELTR  146 (440)
Q Consensus        67 ~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  146 (440)
                      .+.|+ ..++.+.+.|.+.++.+++.|.....++.++|+.+.++.+++|++++++||.+.+..+      -.+.+.....
T Consensus       134 ~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~------l~~~~~~~~~  206 (480)
T PLN02648        134 FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAEFNDPLDQMAFNFLCKALTGKDPSETA------LGSDGPALIQ  206 (480)
T ss_pred             HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccccchHHHHHHHHHHHHHcCCCcchhh------hccchhHHHH
Confidence            89998 5778899999999999999997653355679999999999999999999998665310      1112222222


Q ss_pred             HHHHhhhhccc-ccccc-chhhh-h-hhhchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhhhcCC
Q 013579          147 RQMMLMTSFCF-GDLYP-SLKWI-D-VLTGFIGRLHETAAALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQENGN  222 (440)
Q Consensus       147 ~~~~~~~~~~~-~~~~P-~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~  222 (440)
                      .+..... ... ...+| ++..+ . ..........+..+.+.+++.                   +.++.++...... 
T Consensus       207 ~~~~~~~-~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~ll~~~~~~-  265 (480)
T PLN02648        207 KWLALQL-APLASTGLPHVLEELLLHTFPLPFFLVKSDYDKLYDFFR-------------------ASATEALDLAEKF-  265 (480)
T ss_pred             HHHHHHh-hHHHHcCchHHHHHHhhcccCCchhhhhccHHHHHHHHH-------------------HHHHHHHHHHHhc-
Confidence            2111000 000 00011 00000 0 000000000001111111111                   1122334332222 


Q ss_pred             ccccCCHHHHHHHHHH-HhhcCchhhHHHHHHHHHHHhhChH-HHHHHHHHHHHhhcC-CCcccccccCCchhHHHHHHH
Q 013579          223 LAIELSQDTIKAILMD-MFVGGTDTTATALEWVMAELLKDPR-IMKRAQEEVRGVLKG-KLNIDMKDIDKMDYIKCVIKE  299 (440)
Q Consensus       223 ~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~P~-~~~~lr~Ei~~~~~~-~~~~~~~~~~~l~yl~a~i~E  299 (440)
                         .++++++.++++. +.+++++|++++++|++|+|++||+ +|++|++||+++++. +..++++++++||||++||+|
T Consensus       266 ---~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~E  342 (480)
T PLN02648        266 ---GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYE  342 (480)
T ss_pred             ---CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHH
Confidence               5999999999875 4467788888999999999999995 999999999999873 456899999999999999999


Q ss_pred             HhcccCCCCcccccccccceeeC----CeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCCCCCcccccc-
Q 013579          300 TLRLHAPVPLLVPRETAESVKLN----GYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYRGQDFQFIPF-  374 (440)
Q Consensus       300 ~lRl~p~~~~~~~R~~~~~~~i~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~F-  374 (440)
                      +||++|++++.. |.+.+|++++    ||.||||+.|.++.+.+||||++|+||++|||+||++++..   ....+++| 
T Consensus       343 tLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~  418 (480)
T PLN02648        343 ALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWS  418 (480)
T ss_pred             HHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccC
Confidence            999999999986 8899999996    79999999999999999999999999999999999965321   11234444 


Q ss_pred             --------CCCCCCCcChhhHHHHHHHHHHHHHhcce-eecCCCc
Q 013579          375 --------GAGRRGCPGMSFAIASVEYVVANLLYWFD-WKLPFGV  410 (440)
Q Consensus       375 --------g~G~r~C~G~~la~~~~~~~~~~ll~~~~-~~~~~~~  410 (440)
                              |+|+|.|+|++||+.|++++++.|+++|+ |++.+++
T Consensus       419 ~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        419 NGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             CCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence                    67789999999999999999999999998 9987764


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=83.00  E-value=0.74  Score=29.47  Aligned_cols=8  Identities=38%  Similarity=0.526  Sum_probs=6.4

Q ss_pred             CCCCcCCC
Q 013579          353 LPERFENN  360 (440)
Q Consensus       353 ~P~R~l~~  360 (440)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            88899864


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=67.76  E-value=1.7  Score=36.16  Aligned_cols=44  Identities=18%  Similarity=0.287  Sum_probs=32.2

Q ss_pred             CchhHHHHHHHHhcccCCCCcccccccccceeeCCeeeCCCCEEEE
Q 013579          289 KMDYIKCVIKETLRLHAPVPLLVPRETAESVKLNGYDIPAKTRVFV  334 (440)
Q Consensus       289 ~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~  334 (440)
                      .-....|||.|+.-+.......+  ...+|+.++|..|||||.|+-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vrl--RLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVRL--RLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEEE--EEcCceEECCEEeCCCCEEEE
Confidence            34557788888887765544332  346789999999999998765


No 35 
>PRK06789 flagellar motor switch protein; Validated
Probab=65.74  E-value=8.2  Score=26.16  Aligned_cols=40  Identities=15%  Similarity=0.159  Sum_probs=33.8

Q ss_pred             HHHHHhcccCCCCcccccccccc--eeeCCeeeCCCCEEEEe
Q 013579          296 VIKETLRLHAPVPLLVPRETAES--VKLNGYDIPAKTRVFVN  335 (440)
Q Consensus       296 ~i~E~lRl~p~~~~~~~R~~~~~--~~i~g~~ip~g~~v~~~  335 (440)
                      -++|.|.|.+..-..+-|.+.++  +.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            37899999999888887888776  45599999999999876


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=62.50  E-value=32  Score=21.06  Aligned_cols=42  Identities=14%  Similarity=0.201  Sum_probs=31.4

Q ss_pred             HHHHHHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHH
Q 013579          231 TIKAILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEV  272 (440)
Q Consensus       231 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei  272 (440)
                      ++...+..++-.|.|..+.+++.-+...--||+....+-+|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455666667777777777777777777777999988888876


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=55.84  E-value=13  Score=23.69  Aligned_cols=19  Identities=16%  Similarity=0.489  Sum_probs=16.5

Q ss_pred             HHHHHHhhChHHHHHHHHH
Q 013579          253 WVMAELLKDPRIMKRAQEE  271 (440)
Q Consensus       253 ~~l~~L~~~P~~~~~lr~E  271 (440)
                      -.+.||.+||++.+++.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            4578999999999999874


No 38 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=54.69  E-value=73  Score=22.41  Aligned_cols=51  Identities=12%  Similarity=0.097  Sum_probs=42.5

Q ss_pred             CCHHHHHHHHHHHhhcCchhhHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 013579          227 LSQDTIKAILMDMFVGGTDTTATALEWVMAELLKDPRIMKRAQEEVRGVLK  277 (440)
Q Consensus       227 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~  277 (440)
                      ...+.........++-=++.++....-.+.+.++||+...++.+.+.+-+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            445566666777888889999999999999999999999999998877654


No 39 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=51.59  E-value=27  Score=24.45  Aligned_cols=17  Identities=18%  Similarity=0.442  Sum_probs=15.3

Q ss_pred             hHHHHHHHHHHHHhhcC
Q 013579          262 PRIMKRAQEEVRGVLKG  278 (440)
Q Consensus       262 P~~~~~lr~Ei~~~~~~  278 (440)
                      |++...+|+||.+|+..
T Consensus        36 pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          36 PDYLEQLRKEILEVISK   52 (88)
T ss_pred             cchHHHHHHHHHHHHHH
Confidence            89999999999999863


No 40 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=49.90  E-value=7.5  Score=24.16  Aligned_cols=11  Identities=45%  Similarity=0.984  Sum_probs=9.2

Q ss_pred             cccCCCCCCCc
Q 013579          372 IPFGAGRRGCP  382 (440)
Q Consensus       372 ~~Fg~G~r~C~  382 (440)
                      -+||.|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999984


No 41 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=45.97  E-value=39  Score=30.28  Aligned_cols=70  Identities=16%  Similarity=0.271  Sum_probs=44.3

Q ss_pred             HHHHHHHHhcccCCC---Ccccccccccceee----CCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCcCCCCCCCC
Q 013579          293 IKCVIKETLRLHAPV---PLLVPRETAESVKL----NGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPERFENNPTDYR  365 (440)
Q Consensus       293 l~a~i~E~lRl~p~~---~~~~~R~~~~~~~i----~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~  365 (440)
                      -+.+++.+-.+.||.   |+.+.=..+.|..+    =.-+|.+||.|.++                              
T Consensus       275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------  324 (361)
T COG1759         275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------  324 (361)
T ss_pred             HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------
Confidence            456778888888875   44443333444332    12467888888764                              


Q ss_pred             CCCccccccCCCCCCCcChhhHHHHHHHHH
Q 013579          366 GQDFQFIPFGAGRRGCPGMSFAIASVEYVV  395 (440)
Q Consensus       366 ~~~~~~~~Fg~G~r~C~G~~la~~~~~~~~  395 (440)
                      +++.+++-||-+  +..|+++|+ |+|.++
T Consensus       325 GspYs~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         325 GSPYSNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence            234455566655  667999998 888765


No 42 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=37.21  E-value=11  Score=35.25  Aligned_cols=45  Identities=16%  Similarity=0.234  Sum_probs=32.7

Q ss_pred             CCchhHHHHHHHHhcccCCCCcccccccccceeeCCeeeCCCCEEEE
Q 013579          288 DKMDYIKCVIKETLRLHAPVPLLVPRETAESVKLNGYDIPAKTRVFV  334 (440)
Q Consensus       288 ~~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~~~i~g~~ip~g~~v~~  334 (440)
                      ..-..+.|||.|+.-+.-.....+  ...+|+.++|..||+||.|+-
T Consensus       253 ~~~n~I~A~V~~~qtv~~G~~vrl--RLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       253 SERNTIRACVHETQTVVDGSAVKL--RLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             cCCCceEEEEcCceEEecCCEEEE--EEcCceeeCCEEecCCCEEEE
Confidence            345667888888887765443322  345789999999999998754


No 43 
>PRK05933 type III secretion system protein; Validated
Probab=35.94  E-value=42  Score=30.07  Aligned_cols=43  Identities=16%  Similarity=0.123  Sum_probs=35.3

Q ss_pred             HHHHHHHHhcccCCCCccccccc-cc--ceeeCCeeeCCCCEEEEe
Q 013579          293 IKCVIKETLRLHAPVPLLVPRET-AE--SVKLNGYDIPAKTRVFVN  335 (440)
Q Consensus       293 l~a~i~E~lRl~p~~~~~~~R~~-~~--~~~i~g~~ip~g~~v~~~  335 (440)
                      ...-|+|.|+|.+....-+-|.+ .+  |+.++|..|.+|.+|.++
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            56779999999999888775664 34  566799999999999886


No 44 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=35.24  E-value=96  Score=21.92  Aligned_cols=18  Identities=22%  Similarity=0.553  Sum_probs=15.6

Q ss_pred             ChHHHHHHHHHHHHhhcC
Q 013579          261 DPRIMKRAQEEVRGVLKG  278 (440)
Q Consensus       261 ~P~~~~~lr~Ei~~~~~~  278 (440)
                      .|+..+.+++||-+|+..
T Consensus        35 ~p~~l~~lk~eil~VIsK   52 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKR   52 (87)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            499999999999998764


No 45 
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=34.72  E-value=87  Score=21.96  Aligned_cols=18  Identities=22%  Similarity=0.359  Sum_probs=15.7

Q ss_pred             ChHHHHHHHHHHHHhhcC
Q 013579          261 DPRIMKRAQEEVRGVLKG  278 (440)
Q Consensus       261 ~P~~~~~lr~Ei~~~~~~  278 (440)
                      .|+..+.+++||-+++..
T Consensus        36 ~p~~l~~lk~dil~VIsK   53 (84)
T PRK13989         36 PPDYLPALQKELVAVISK   53 (84)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            489999999999999864


No 46 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=33.90  E-value=11  Score=30.07  Aligned_cols=36  Identities=22%  Similarity=0.394  Sum_probs=26.6

Q ss_pred             CCCCCCCcCCCCCCCCCCCccccccCCCCCCCcChh
Q 013579          350 EEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGMS  385 (440)
Q Consensus       350 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~  385 (440)
                      .+|||++|-+--.+...+....+-|..|+=.|.|-.
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            489999996533233335567999999999999964


No 47 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=32.99  E-value=30  Score=22.77  Aligned_cols=16  Identities=25%  Similarity=0.652  Sum_probs=13.1

Q ss_pred             CchhHHHHHHHHhccc
Q 013579          289 KMDYIKCVIKETLRLH  304 (440)
Q Consensus       289 ~l~yl~a~i~E~lRl~  304 (440)
                      +...++.+|+|++|+.
T Consensus        39 r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   39 RKQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            4567899999999974


No 48 
>PRK13987 cell division topological specificity factor MinE; Provisional
Probab=31.30  E-value=1.1e+02  Score=21.84  Aligned_cols=18  Identities=17%  Similarity=0.468  Sum_probs=15.5

Q ss_pred             ChHHHHHHHHHHHHhhcC
Q 013579          261 DPRIMKRAQEEVRGVLKG  278 (440)
Q Consensus       261 ~P~~~~~lr~Ei~~~~~~  278 (440)
                      .|+..+.+++||.+++..
T Consensus        33 sp~~l~~lk~eIl~VI~k   50 (91)
T PRK13987         33 SPDVLEMIKEDILKVISK   50 (91)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            489999999999998864


No 49 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=29.46  E-value=53  Score=25.27  Aligned_cols=23  Identities=17%  Similarity=0.410  Sum_probs=16.9

Q ss_pred             CCCcChhhHHHHHHHHHHHHHhc
Q 013579          379 RGCPGMSFAIASVEYVVANLLYW  401 (440)
Q Consensus       379 r~C~G~~la~~~~~~~~~~ll~~  401 (440)
                      -.|.|+.||..++-.+|..|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            37999999999999999999874


No 50 
>COG2071 Predicted glutamine amidotransferases [General function prediction only]
Probab=29.44  E-value=39  Score=28.98  Aligned_cols=58  Identities=21%  Similarity=0.434  Sum_probs=34.7

Q ss_pred             CchhHHHHHHHHhcccCCCCcccccccccc-------eeeCCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCC
Q 013579          289 KMDYIKCVIKETLRLHAPVPLLVPRETAES-------VKLNGYDIPAKTRVFVNGWAIQRDPKEWDRPEEFLPER  356 (440)
Q Consensus       289 ~l~yl~a~i~E~lRl~p~~~~~~~R~~~~~-------~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R  356 (440)
                      ...|++|+++     ....|..+| .....       -.++|..++.|+.|-...|.    ++.-++...|||+|
T Consensus        28 ~~~yv~ai~~-----aGg~pillP-~~~d~~~~~~~l~~iDgliltGg~nV~P~~YG----ee~~~~~~~~~p~R   92 (243)
T COG2071          28 PYDYVDAIIK-----AGGIPILLP-ALEDPEDARQYLDLIDGLILTGGSNVDPSLYG----EEPSEKDGPYDPER   92 (243)
T ss_pred             HHHHHHHHHH-----cCCceEEec-CCCCHHHHHHHHhhccEEEecCCCcCCHHHcC----CCCCcccCCCCccc
Confidence            4577788766     566677776 22111       13488888888766444433    22223446689999


No 51 
>PRK13988 cell division topological specificity factor MinE; Provisional
Probab=29.15  E-value=1.5e+02  Score=21.54  Aligned_cols=18  Identities=17%  Similarity=0.488  Sum_probs=15.7

Q ss_pred             ChHHHHHHHHHHHHhhcC
Q 013579          261 DPRIMKRAQEEVRGVLKG  278 (440)
Q Consensus       261 ~P~~~~~lr~Ei~~~~~~  278 (440)
                      .|+..+.+++||.+|+..
T Consensus        37 sp~~l~~mk~dIl~VIsk   54 (97)
T PRK13988         37 SPELLEQMRKEILEVVAR   54 (97)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            499999999999999864


No 52 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=28.52  E-value=66  Score=25.03  Aligned_cols=43  Identities=26%  Similarity=0.228  Sum_probs=35.5

Q ss_pred             HHHHHHHHhcccCCCCccccccccccee--eCCeeeCCCCEEEEe
Q 013579          293 IKCVIKETLRLHAPVPLLVPRETAESVK--LNGYDIPAKTRVFVN  335 (440)
Q Consensus       293 l~a~i~E~lRl~p~~~~~~~R~~~~~~~--i~g~~ip~g~~v~~~  335 (440)
                      ...-+.|.++|.+...+.+.+.+.+.+.  ++|+.|-+|.+|.++
T Consensus        82 ~~~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          82 TKMPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeeeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            4456899999999988888888877655  499999999999874


No 53 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=28.39  E-value=39  Score=23.64  Aligned_cols=20  Identities=25%  Similarity=0.474  Sum_probs=17.5

Q ss_pred             HHHHHHHHHHHhcceeecCC
Q 013579          389 ASVEYVVANLLYWFDWKLPF  408 (440)
Q Consensus       389 ~~~~~~~~~ll~~~~~~~~~  408 (440)
                      .-|+-++..||+-|||.+++
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            45789999999999999876


No 54 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=28.16  E-value=2.7e+02  Score=21.17  Aligned_cols=96  Identities=15%  Similarity=0.214  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCccHHHHHHHhh------hcCCccccCCHHHHHHHHHHHhhcCchhhHHHHHHH--
Q 013579          183 ALGDLLDQVIEEHRVSLTDNDQSDKKDFVHILLQLQ------ENGNLAIELSQDTIKAILMDMFVGGTDTTATALEWV--  254 (440)
Q Consensus       183 ~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~------~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~--  254 (440)
                      ...+-+..++++++++...+..-.-.+..+.|+...      +.......++.++..-.++.-+.-...+++..|...  
T Consensus        11 ~v~~~I~~iVe~r~qeGA~~~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~~~~ILg~~~l   90 (127)
T PF05261_consen   11 KVLEEINDIVEERRQEGATEKDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFTVSKILGMSSL   90 (127)
T ss_dssp             CHHHHHHHHHHHHHCCT-TTTT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            345567778888888765421122234455565431      111112468888887777777766666665555443  


Q ss_pred             HHHHhhC---------hHHHHHHHHHHHHhhcC
Q 013579          255 MAELLKD---------PRIMKRAQEEVRGVLKG  278 (440)
Q Consensus       255 l~~L~~~---------P~~~~~lr~Ei~~~~~~  278 (440)
                      .-++..+         +++.+++++++...++.
T Consensus        91 s~~v~~~~~~ey~~m~~~I~~~v~e~m~~FFpe  123 (127)
T PF05261_consen   91 SPEVKGNPKFEYENMVEKIREKVSEEMERFFPE  123 (127)
T ss_dssp             SHHHCCHCGG-HHHHHHHHHHHHHHHHHHHS-C
T ss_pred             cHhhccCCcccHHHHHHHHHHHHHHHHHhcCCC
Confidence            2333333         34555566666655543


No 55 
>PHA03162 hypothetical protein; Provisional
Probab=26.51  E-value=60  Score=24.67  Aligned_cols=24  Identities=21%  Similarity=0.477  Sum_probs=20.2

Q ss_pred             CCCCCCCcChhhHHHHHHHHHHHH
Q 013579          375 GAGRRGCPGMSFAIASVEYVVANL  398 (440)
Q Consensus       375 g~G~r~C~G~~la~~~~~~~~~~l  398 (440)
                      ++|.+.|||+...+-++-.=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999998888777765


No 56 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=26.37  E-value=32  Score=28.83  Aligned_cols=23  Identities=35%  Similarity=0.748  Sum_probs=19.3

Q ss_pred             Eehhhh-ccCCCCCCCCCCCCCCC
Q 013579          334 VNGWAI-QRDPKEWDRPEEFLPER  356 (440)
Q Consensus       334 ~~~~~~-~~d~~~~~~p~~F~P~R  356 (440)
                      ++-|.- |.|+.+|.|.+.|+|-|
T Consensus       188 iPGW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  188 IPGWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCCCCcccccCccccCCCC
Confidence            444555 89999999999999988


No 57 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=25.76  E-value=48  Score=25.17  Aligned_cols=22  Identities=27%  Similarity=0.329  Sum_probs=18.0

Q ss_pred             cccccceeeCCeeeCCCCEEEE
Q 013579          313 RETAESVKLNGYDIPAKTRVFV  334 (440)
Q Consensus       313 R~~~~~~~i~g~~ip~g~~v~~  334 (440)
                      -+++.|..++|..||+||.|..
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EecCCCcccCCeeecceEEEEE
Confidence            4556689999999999999854


No 58 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=23.88  E-value=69  Score=17.55  Aligned_cols=16  Identities=31%  Similarity=0.684  Sum_probs=13.1

Q ss_pred             CCccccccCCCCCCCc
Q 013579          367 QDFQFIPFGAGRRGCP  382 (440)
Q Consensus       367 ~~~~~~~Fg~G~r~C~  382 (440)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4567999999999984


No 59 
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=23.26  E-value=37  Score=27.72  Aligned_cols=57  Identities=19%  Similarity=0.276  Sum_probs=33.9

Q ss_pred             CCCCCCCcCCCCCCCCCCCccccccCCCCCCCcC-hhhHHHH-HHHHHHHHHhcceeec
Q 013579          350 EEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPG-MSFAIAS-VEYVVANLLYWFDWKL  406 (440)
Q Consensus       350 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G-~~la~~~-~~~~~~~ll~~~~~~~  406 (440)
                      -+|+|++|-+---+.+.+....+-|+.|+=.|.| +.-.... ..--++.+|++.++..
T Consensus        29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~i~~~L~~~g~~~   87 (174)
T cd04516          29 AEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTGAKSEDDSKLAARKYARIIQKLGFPA   87 (174)
T ss_pred             CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCCCC
Confidence            6899999854322222344568899999999998 4432222 2223345566655543


No 60 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=22.78  E-value=1.5e+02  Score=17.13  Aligned_cols=13  Identities=15%  Similarity=0.324  Sum_probs=10.0

Q ss_pred             HhhChHHHHHHHH
Q 013579          258 LLKDPRIMKRAQE  270 (440)
Q Consensus       258 L~~~P~~~~~lr~  270 (440)
                      ..+||++++.+++
T Consensus        23 ~~~HPei~~~i~~   35 (38)
T PF14483_consen   23 CERHPEIQQEIRS   35 (38)
T ss_dssp             HHHSTHHHHHHHT
T ss_pred             HHhChhHHHHHHh
Confidence            3479999988775


No 61 
>TIGR01215 minE cell division topological specificity factor MinE. This protein is involved in the process of cell division. This protein prevents the proteins MinC and MinD to inhibit cell division at internal sites, but allows inhibiton at polar sites. This allows for correct cell division at the proper sites.
Probab=22.19  E-value=1.8e+02  Score=20.21  Aligned_cols=18  Identities=17%  Similarity=0.405  Sum_probs=15.6

Q ss_pred             ChHHHHHHHHHHHHhhcC
Q 013579          261 DPRIMKRAQEEVRGVLKG  278 (440)
Q Consensus       261 ~P~~~~~lr~Ei~~~~~~  278 (440)
                      .|+..+.+++||-+++..
T Consensus        34 ~p~~l~~mk~dil~VIsk   51 (81)
T TIGR01215        34 APEYLEELRKEILEVISK   51 (81)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            589999999999998864


No 62 
>PLN00062 TATA-box-binding protein; Provisional
Probab=22.05  E-value=40  Score=27.66  Aligned_cols=55  Identities=20%  Similarity=0.298  Sum_probs=33.7

Q ss_pred             CCCCCCCcCCCCCCCCCCCccccccCCCCCCCcCh-hhHHHH-HHHHHHHHHhccee
Q 013579          350 EEFLPERFENNPTDYRGQDFQFIPFGAGRRGCPGM-SFAIAS-VEYVVANLLYWFDW  404 (440)
Q Consensus       350 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~-~la~~~-~~~~~~~ll~~~~~  404 (440)
                      -+|+||||-+---+.+.+....+-|+.|+=.|.|- ...... ..--++.+|++.++
T Consensus        29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~~~~~L~~lg~   85 (179)
T PLN00062         29 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEHDSKLAARKYARIIQKLGF   85 (179)
T ss_pred             CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCC
Confidence            58999998543222223445789999999999984 433322 22334455665554


No 63 
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=20.22  E-value=45  Score=20.96  Aligned_cols=14  Identities=29%  Similarity=0.714  Sum_probs=10.9

Q ss_pred             ccCCCCCCCc--Chhh
Q 013579          373 PFGAGRRGCP--GMSF  386 (440)
Q Consensus       373 ~Fg~G~r~C~--G~~l  386 (440)
                      .||-|+|.|.  |+.-
T Consensus        11 ~yGkGsr~C~vCg~~~   26 (54)
T PTZ00218         11 TYGKGSRQCRVCSNRH   26 (54)
T ss_pred             cCCCCCCeeecCCCcc
Confidence            6999999995  6643


Done!