BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013580
MMERRRSNLSDDPSNSQNHNMKKPESNKKYANKDVMPRCELWTDGLICAFEFIQGRKRSV
TSKSDSRTLSDSENSKKKVPAEGLGEASPESDRNKLLDSLLLDELRGGQSFPLGDSRHNR
LSQSSQFNAAARFEGSHWVPIGWARISELVQTVQQLELIDDEDDITVADLAAPYWERPAG
PVWWCHMLAGHPSVEAWLSGAQWLHPAVSLALRDESRLISERMKYLLYEVPVRVAGGLLF
ELLGQSAGDPFVDEDDIPIVLRSWQAQNFLITALHVKGPVSSNNVLGITEVQELLFVGGY
NVPRTVHEVIAHLACRLSRWDDRLFRKTIFGAADEIELKFVNRRNLEDMNLFAIILNQEI
RRLSRQVIRVKWSLHAREEIVFELYQHLRGNVARTLLEGIRKNAREMIEEQEAVRGRLFT
IQDVMQSTVRAWLQKPSSNP

High Scoring Gene Products

Symbol, full name Information P value
AT1G29820 protein from Arabidopsis thaliana 9.3e-146
AT1G29830 protein from Arabidopsis thaliana 2.0e-136
AT2G42950 protein from Arabidopsis thaliana 3.4e-128

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013580
        (440 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2019292 - symbol:AT1G29820 species:3702 "Arabi...  1424  9.3e-146  1
TAIR|locus:2019282 - symbol:AT1G29830 species:3702 "Arabi...  1336  2.0e-136  1
TAIR|locus:2045575 - symbol:AT2G42950 species:3702 "Arabi...  1188  3.4e-128  2


>TAIR|locus:2019292 [details] [associations]
            symbol:AT1G29820 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016020 "membrane"
            evidence=IEA] [GO:0030001 "metal ion transport" evidence=IEA]
            [GO:0046873 "metal ion transmembrane transporter activity"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            InterPro:IPR002523 Pfam:PF01544 EMBL:CP002684 GO:GO:0016020
            GO:GO:0046873 IPI:IPI00532567 RefSeq:NP_001117384.1
            RefSeq:NP_174275.2 UniGene:At.40654 ProteinModelPortal:F4I348
            PRIDE:F4I348 EnsemblPlants:AT1G29820.1 EnsemblPlants:AT1G29820.2
            GeneID:839860 KEGG:ath:AT1G29820 OMA:TDGLICA Uniprot:F4I348
        Length = 540

 Score = 1424 (506.3 bits), Expect = 9.3e-146, P = 9.3e-146
 Identities = 279/431 (64%), Positives = 331/431 (76%)

Query:    15 NSQNHNMKKPESNKKYANKDV--MPRCELWTDGLICAFEFIQGRKRSVTSKSDSRTLSDS 72
             N +NH++ +   +KK  +K+   +P+ +LWTDG+ICAFEFI+G K+ V    DS+ L   
Sbjct:     4 NGENHSVSQESKSKKLESKNHSGVPKSDLWTDGIICAFEFIRGPKKHV----DSKQLEKG 59

Query:    73 ENSKKKVPAEGLGEASPESDRNKXXXXXXXXXXRGGQSFPLGDSRHNRLSQSSQFNAAAR 132
                ++  P   +  + P    N           R      L D +   L  S       R
Sbjct:    60 ALKQEDGP---ISHSFP--GHNPFVDSSPVDDLRSRSVSSL-DFKEAHLLPSGHVE---R 110

Query:   133 FEGSHWVPIGWARISELVQTVQ------QLELIDDEDDITVADLAAPYWERPAGPVWWCH 186
             +EGSHWVPIGWARI+ELVQ VQ       LELIDDE+D+ V DLAAPYWERP GP WWCH
Sbjct:   111 YEGSHWVPIGWARITELVQMVQVNAEWPNLELIDDEEDVPVTDLAAPYWERPGGPTWWCH 170

Query:   187 MLAGHPSVEAWLSGAQWLHPAVSLALRDESRLISERMKYLLYEVPVRVAGGLLFELLGQS 246
             + AG+  VE WL  A WLHPA+SLALRDES+LISERM++LLYEVPVRVAGGLLFELLGQS
Sbjct:   171 LSAGNSFVEGWLRSATWLHPAISLALRDESKLISERMRHLLYEVPVRVAGGLLFELLGQS 230

Query:   247 AGDPFVDEDDIPIVLRSWQAQNFLITALHVKGPVSSNNVLGITEVQELLFVGGYNVPRTV 306
              GDP + EDD+P+V RSWQA+NFL++ +H+KG V++ NVLGITEV+ELL+ GGYNVPRTV
Sbjct:   231 VGDPVISEDDVPVVFRSWQAKNFLVSVMHIKGNVTNTNVLGITEVEELLYAGGYNVPRTV 290

Query:   307 HEVIAHLACRLSRWDDRLFRKTIFGAADEIELKFVNRRNLEDMNLFAIILNQEIRRLSRQ 366
             HEVIAHLACRLSRWDDRLFRK+IFGAADEIELKF+NRRN ED+NLF+IILNQEIR+LSRQ
Sbjct:   291 HEVIAHLACRLSRWDDRLFRKSIFGAADEIELKFMNRRNYEDLNLFSIILNQEIRKLSRQ 350

Query:   367 VIRVKWSLHAREEIVFELYQHLRGNVARTLLEGIRKNAREMIEEQEAVRGRLFTIQDVMQ 426
             VIRVKWSLHAREEI+FEL QHLRGN+AR LL+G+RKN REM+EEQEAVRGRLFTIQDVMQ
Sbjct:   351 VIRVKWSLHAREEIIFELLQHLRGNIARHLLDGLRKNTREMLEEQEAVRGRLFTIQDVMQ 410

Query:   427 STVRAWLQKPS 437
             S+VRAWLQ  S
Sbjct:   411 SSVRAWLQDKS 421


>TAIR|locus:2019282 [details] [associations]
            symbol:AT1G29830 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016020 "membrane"
            evidence=IEA] [GO:0030001 "metal ion transport" evidence=IEA]
            [GO:0046873 "metal ion transmembrane transporter activity"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            InterPro:IPR002523 Pfam:PF01544 EMBL:CP002684 GO:GO:0016020
            GO:GO:0046873 UniGene:At.40654 IPI:IPI00939018
            RefSeq:NP_001154383.1 UniGene:At.66908 UniGene:At.73941
            ProteinModelPortal:F4I350 EnsemblPlants:AT1G29830.3 GeneID:839861
            KEGG:ath:AT1G29830 Uniprot:F4I350
        Length = 568

 Score = 1336 (475.4 bits), Expect = 2.0e-136, P = 2.0e-136
 Identities = 267/436 (61%), Positives = 317/436 (72%)

Query:    12 DPSNSQNHNMKKPESNKKYANKDVMPRCELWTDGLICAFEFIQGRKRSVTSKSDSRTLSD 71
             DP+ + NH  +  ES     N   +P+ +LWTDG+ICAFEFI+G K+ V SK   +    
Sbjct:    37 DPAITTNHVSQ--ESK----NHSGVPKSDLWTDGIICAFEFIRGPKKHVDSKQLYKGYLK 90

Query:    72 SENS--KKKVPAEGLGEASPESDRNKXXXXXXXXXXRGGQSFPLGDSRHNRLSQSSQFNA 129
              E+   +   P       SP  D  +          +     P G   H           
Sbjct:    91 QEDGPIRHSFPGHNPFIDSPAVDYLRSRSVSSLDF-KEAHVLPSG---H----------- 135

Query:   130 AARFEGSHWVPIGWARISELVQTVQ------QLELIDDEDDITVADLAAPYWERPAGPVW 183
               R EGSHWVPIGW RI++LVQ VQ       L+LIDDE+D+ V DLAAPYWERP GP W
Sbjct:   136 VERSEGSHWVPIGWTRITKLVQQVQVNAEWPNLKLIDDEEDVPVTDLAAPYWERPGGPTW 195

Query:   184 WCHMLAGHPSVEAWLSGAQWLHPAVSLALRDESRLISERMKYLLYEVPVRVAGGLLFELL 243
             WCH+ AG+  VE WL  A WLHPA+SLALRDES+LISERM++LLYEVPVRV GGLLFELL
Sbjct:   196 WCHLTAGNSFVEGWLRSATWLHPAISLALRDESKLISERMRHLLYEVPVRVDGGLLFELL 255

Query:   244 GQSAGDPFVDEDDIPIVLRSWQAQNFLITALHVKGPVSSNNVLGITEVQELLFVGGYNVP 303
             GQS GDP + EDD+P+V RSWQA+NFL++ +H+KG VS +NVLGITEV+ELL+ G YNVP
Sbjct:   256 GQSMGDPVIGEDDVPVVFRSWQAKNFLVSVMHIKGNVSKSNVLGITEVEELLYAGSYNVP 315

Query:   304 RTVHEVIAHLACRLSRWDDRLFRKTIFGAADEIELKFVNRRNLEDMNLFAIILNQEIRRL 363
             RT+HEVIAHLACRLSRWDDRLFRK+IFGAADEIELKF+NRRN ED+NLF+IILNQEIR+L
Sbjct:   316 RTIHEVIAHLACRLSRWDDRLFRKSIFGAADEIELKFMNRRNHEDLNLFSIILNQEIRKL 375

Query:   364 SRQVIRVKWSLHAREEIVFELYQHLRGNVARTLLEGIRKNAREMIEEQEAVRGRLFTIQD 423
             +RQ IRVKWSLHAREEI+ EL QHLRGN+ R LLEG+R N REM+EEQEAVRGRLFTIQD
Sbjct:   376 ARQTIRVKWSLHAREEIILELLQHLRGNIPRHLLEGLRNNTREMLEEQEAVRGRLFTIQD 435

Query:   424 VMQSTVRAWLQKPSSN 439
              +QS +R+WLQ  S N
Sbjct:   436 NIQSNIRSWLQDQSLN 451


>TAIR|locus:2045575 [details] [associations]
            symbol:AT2G42950 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
            evidence=IEA] [GO:0030001 "metal ion transport" evidence=IEA]
            [GO:0046873 "metal ion transmembrane transporter activity"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            InterPro:IPR002523 Pfam:PF01544 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0046873 EMBL:BT009689
            EMBL:AK117816 IPI:IPI00525867 RefSeq:NP_181823.2 UniGene:At.36953
            ProteinModelPortal:Q8GY73 PaxDb:Q8GY73 PRIDE:Q8GY73
            EnsemblPlants:AT2G42950.1 GeneID:818896 KEGG:ath:AT2G42950
            TAIR:At2g42950 eggNOG:NOG241844 HOGENOM:HOG000029764
            InParanoid:Q8GY73 OMA:DEVELMF PhylomeDB:Q8GY73
            ProtClustDB:CLSN2680210 Genevestigator:Q8GY73 Uniprot:Q8GY73
        Length = 501

 Score = 1188 (423.3 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
 Identities = 233/309 (75%), Positives = 259/309 (83%)

Query:   136 SHWVPIGWARISELVQTVQ-----QLELID-DEDDITVADLAAPYWERP-AGPVWWCHML 188
             S+W  IGW RISELVQTVQ      L  ID DED+ TVA+LAAPYWERP AGP WWCH+ 
Sbjct:    66 SYWRGIGWDRISELVQTVQVDNNWDLRKIDLDEDEATVAELAAPYWERPLAGPTWWCHLD 125

Query:   189 AGHPSVEAWLSGAQWLHPAVSLALRDESRLISERMKYLLYEVPVRVAGGLLFELLGQSAG 248
             A H  + +WL  A WLHPAVSLALRDES+LISERMK++ YEVPVRVAGGLLFELLGQSAG
Sbjct:   126 ATHHGIASWLRNAHWLHPAVSLALRDESKLISERMKHIFYEVPVRVAGGLLFELLGQSAG 185

Query:   249 DPFVDEDDIPIVLRSWQAQNFLITALHVKGPVSSNNVLGITEVQELLFVGGYNVPRTVHE 308
             DPF+ EDDIPIVLRSWQAQNFL+TALHVKG   + +VLGITEVQE+L  GG  +PRTVHE
Sbjct:   186 DPFIQEDDIPIVLRSWQAQNFLVTALHVKGFALNISVLGITEVQEMLIAGGACIPRTVHE 245

Query:   309 VIAHLACRLSRWDDRLFRKTIFGAADEIELKFVNRRNLEDMNLFAIILNQEIRRLSRQVI 368
             +IAHLACRL+RWDDRLFRK IFGAADE+EL F+N+R  ED NLF  ILNQEIRRLS QVI
Sbjct:   246 LIAHLACRLARWDDRLFRKYIFGAADEVELMFMNKRLYEDPNLFTTILNQEIRRLSTQVI 305

Query:   369 RVKWSLHAREEIVFELYQHLRGNVARTLLEGIRKNAREMIEEQEAVRGRLFTIQDVMQST 428
             RVKWSLHAREEIVFEL Q L+GN  + LLEGI+K+ R+MI EQEAVRGRLFTIQDVMQ+T
Sbjct:   306 RVKWSLHAREEIVFELLQQLKGNRTKDLLEGIKKSTRDMINEQEAVRGRLFTIQDVMQNT 365

Query:   429 VRAWLQKPS 437
             VRAWLQ  S
Sbjct:   366 VRAWLQDQS 374

 Score = 91 (37.1 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
 Identities = 16/22 (72%), Positives = 20/22 (90%)

Query:    41 LWTDGLICAFEFIQGRKRSVTS 62
             LWT+GLICAFEF QGR+++ TS
Sbjct:    15 LWTNGLICAFEFCQGRRKNNTS 36


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      440       430   0.00086  118 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  622 (66 KB)
  Total size of DFA:  283 KB (2146 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.21u 0.08s 35.29t   Elapsed:  00:00:02
  Total cpu time:  35.21u 0.08s 35.29t   Elapsed:  00:00:02
  Start:  Sat May 11 05:11:53 2013   End:  Sat May 11 05:11:55 2013

Back to top