Query 013583
Match_columns 440
No_of_seqs 205 out of 1571
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 13:17:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013583.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013583hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1csh_A Citrate synthase; lyase 100.0 9E-120 3E-124 936.4 47.1 432 7-438 2-434 (435)
2 3hwk_A Methylcitrate synthase; 100.0 3E-103 1E-107 805.6 37.0 374 23-433 25-407 (414)
3 2h12_A Citrate synthase; acido 100.0 3E-102 1E-106 805.1 35.4 375 24-434 38-428 (436)
4 3msu_A Citrate synthase; helix 100.0 3E-102 1E-106 800.6 35.2 364 36-433 46-424 (427)
5 2ibp_A Citrate synthase; disul 100.0 2E-101 6E-106 794.5 34.0 379 30-434 9-401 (409)
6 3o8j_A 2-methylcitrate synthas 100.0 5E-101 2E-105 787.9 34.2 368 32-434 18-395 (404)
7 3l96_A Citrate synthase; quate 100.0 2E-102 8E-107 802.3 23.3 368 36-434 37-418 (426)
8 2p2w_A Citrate synthase; trans 100.0 2E-100 6E-105 778.1 36.0 354 43-434 1-355 (367)
9 2c6x_A Citrate synthase 1; tri 100.0 3E-100 1E-104 775.2 37.1 355 45-432 2-359 (363)
10 3tqg_A 2-methylcitrate synthas 100.0 2E-100 8E-105 777.6 34.1 353 44-434 7-366 (375)
11 1o7x_A Citrate synthase; lyase 100.0 1.4E-99 5E-104 773.9 34.3 359 44-436 4-371 (377)
12 1iom_A Citrate synthase; open 100.0 6.5E-99 2E-103 769.1 38.8 358 45-434 4-368 (377)
13 1vgm_A 378AA long hypothetical 100.0 4E-99 1E-103 770.9 35.7 355 46-434 7-370 (378)
14 1a59_A Citrate synthase; cold- 100.0 7.3E-99 3E-103 769.9 36.7 360 44-432 5-373 (378)
15 1aj8_A Citrate synthase; hyper 100.0 6.8E-99 2E-103 767.5 36.3 354 46-432 3-360 (371)
16 2ifc_A Citrate synthase; oxalo 100.0 7.2E-99 2E-103 770.7 35.2 358 44-434 7-376 (385)
17 1vgp_A 373AA long hypothetical 100.0 1.5E-98 5E-103 765.9 34.9 354 44-433 3-364 (373)
18 3tqg_A 2-methylcitrate synthas 49.2 44 0.0015 33.5 8.0 62 90-153 153-218 (375)
19 3u5c_P 40S ribosomal protein S 43.2 9.4 0.00032 33.1 1.7 22 67-98 15-36 (142)
20 3j20_T 30S ribosomal protein S 43.1 9.1 0.00031 32.8 1.6 22 67-98 6-27 (132)
21 1a59_A Citrate synthase; cold- 39.0 77 0.0026 31.7 8.0 59 91-151 154-216 (378)
22 1aj8_A Citrate synthase; hyper 38.5 80 0.0027 31.5 8.0 62 91-152 151-214 (371)
23 1iom_A Citrate synthase; open 37.8 82 0.0028 31.4 8.0 62 91-152 152-215 (377)
24 3o8j_A 2-methylcitrate synthas 37.5 83 0.0028 31.8 8.0 61 90-152 182-246 (404)
25 2ifc_A Citrate synthase; oxalo 37.4 84 0.0029 31.5 8.0 62 91-152 156-219 (385)
26 2xzm_S RPS15E; ribosome, trans 36.9 12 0.00041 32.6 1.4 13 67-79 11-23 (144)
27 2ibp_A Citrate synthase; disul 36.4 88 0.003 31.6 8.0 62 91-152 182-245 (409)
28 1vgp_A 373AA long hypothetical 35.8 89 0.003 31.1 7.8 62 91-152 148-211 (373)
29 1vgm_A 378AA long hypothetical 35.6 94 0.0032 31.0 8.0 62 91-152 152-215 (378)
30 3hwk_A Methylcitrate synthase; 33.5 1E+02 0.0036 31.2 7.9 60 91-152 196-259 (414)
31 3iz6_R 40S ribosomal protein S 29.9 11 0.00038 33.1 0.0 15 67-81 24-38 (154)
32 2c6x_A Citrate synthase 1; tri 28.4 1.2E+02 0.004 30.2 7.2 62 91-152 145-208 (363)
33 4ay7_A Methylcobalamin\: coenz 26.4 69 0.0024 31.0 5.1 44 299-342 302-346 (348)
34 1o7x_A Citrate synthase; lyase 23.5 1.7E+02 0.0057 29.2 7.3 60 91-152 151-214 (377)
No 1
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=100.00 E-value=9.4e-120 Score=936.40 Aligned_cols=432 Identities=61% Similarity=1.086 Sum_probs=411.2
Q ss_pred hhHHHHHHHHCHHHHHHHHHHHHhhCCccccceehhhhccccccccccccccceecCCCCeeecCCCHHHHhhhCCCCCC
Q 013583 7 LDLHSQLKEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKP 86 (440)
Q Consensus 7 ~~l~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~t~~~~~~Gl~g~~~~~t~is~iD~~~Gi~YRGy~I~eL~~~~~~~~~ 86 (440)
++||++++++||.+++++++|+++||++++|++|+|++.+||+|+++++|+||+|||++||+||||+|+||++++|+.++
T Consensus 2 ~~lk~~~~~~i~~~~~~~~~~~~~~g~~~~~~~t~~~~~~Gl~g~~~~~t~Is~id~~~Gl~YRGy~I~dLa~~~~~~~~ 81 (435)
T 1csh_A 2 TNLKDVLASLIPKEQARIKTFRQQHGNTAVGQITVDMSYGGMRGMKGLIYETSVLDPDEGIRFRGFSIPECQKLLPKAGG 81 (435)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCHHHHHTTTTTCCCCCCCSEEEETTTEEEETTEEHHHHHHHSCBCTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccCcCCCeeeeeeeeEEcCCCCeeECCccHHHHHhhCccccc
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred CCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccC
Q 013583 87 DGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIH 166 (440)
Q Consensus 87 ~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~ 166 (440)
+.+++||||+||||+|+|||++|+++|+++|..++.+|+.+.++|++||+++|||++|+++|++|+++++|++.|+++.+
T Consensus 82 ~~~~~feev~yLLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~v~aL~~~~~f~~~~~~~~~ 161 (435)
T 1csh_A 82 GEEPLPEGLFWLLVTGQIPTPEQVSWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGIN 161 (435)
T ss_dssp CCSBCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHGGGGCHHHHHHHTTCC
T ss_pred CCcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCccCChHHHHHHHHHHHhhcccccccccccCC
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999888877665
Q ss_pred CCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCC-cccCCCCCCCHHHHHHhhhcCCchHHHHHHHHHHHHhcCCCCCCC
Q 013583 167 KSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDG-KIIPKDDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNV 245 (440)
Q Consensus 167 ~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~-~~~~p~~~l~~~~n~l~ml~~~~~~~~~~l~~~Lvl~ADHeg~n~ 245 (440)
+.++|++.++++++|||++|+|+|++||++++++ .+++|++++||++||++||++|++.+.++||++|||||||||+|+
T Consensus 162 ~~~~~~~~~~~a~~LiAk~p~iaa~~yr~~~~~~~~~i~p~~~ls~a~nfl~ml~~p~~~~~~~ld~~LiLhADHeg~N~ 241 (435)
T 1csh_A 162 RTKYWEFVYEDAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGYTDPQFTELMRLYLTIHSDHEGGNV 241 (435)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCTTSCHHHHHHHHHTCCCHHHHHHHHHHHHHTSCCCSCSH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCCCHHHHHHHHhcCCChHHHHHHHHHHHHccCCCCCch
Confidence 5667999999999999999999999999998765 578999999999999999998999999999999999999966999
Q ss_pred chhHHHHHhhcCcChHHHHHHHHhhhcccccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCC
Q 013583 246 SAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVL 325 (440)
Q Consensus 246 St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA~~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~~ipGfGH~vy 325 (440)
||||+||++||++|+|+|++|||++|+||+|||||++|++||.++.++||++.+++++++||++.+++|++|||||||||
T Consensus 242 STftaRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~ig~~~~~~~~~~~v~~~l~~g~~i~GfGHrVy 321 (435)
T 1csh_A 242 SAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVL 321 (435)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTCCCTTBCCSSC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHhccCCcccChHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCceecCCcccc
Confidence 99999999999999999999999999999999999999999999988888665689999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHhhCCCChHHHHHHHHHHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhh
Q 013583 326 RKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSL 405 (440)
Q Consensus 326 ~~~DPRa~~L~~~a~~~~~~~~~~~~a~~le~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~ 405 (440)
|+.|||+++|+++++++.+++++++++.+||+++++++.++++.|+++||||||+|+++++||||+.++||++|++||++
T Consensus 322 k~~DPRa~~L~~~a~~l~~~~~~~~~a~~le~~a~~~l~~~~~~k~l~pNVDf~sg~i~~~lGipp~~~ft~lFaisR~~ 401 (435)
T 1csh_A 322 RKTDPRYTCQREFALKHLPSDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRAL 401 (435)
T ss_dssp CSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHTCCSCCSBCTHHHHHHHHHHTTCCCGGGHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHcCCChhhcccchhhhhhhH
Confidence 99999999999999999888999999999999998877778899999999999999999999995459999999999999
Q ss_pred hHHHhHHHHHHcCCCccCCCccchhHHHHHhhh
Q 013583 406 GICSQLIWDRALGLPLERPKSVTLDWIEKNCKK 438 (440)
Q Consensus 406 Gw~AH~~Eq~~~~~~i~RP~~~~~~~~~~~~~~ 438 (440)
||+||++||+.++.||+||+|+|++++++.|+.
T Consensus 402 Gw~AH~~Eq~~~~~~I~RP~~~y~~~~~~~~~~ 434 (435)
T 1csh_A 402 GVLAQLIWSRALGFPLERPKSMSTAGLEKLSAG 434 (435)
T ss_dssp HHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHCC
T ss_pred HHHHHHHHHHhcCCCCcCcHHHhhHHHHHHhcC
Confidence 999999999999988999999999999999863
No 2
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-103 Score=805.60 Aligned_cols=374 Identities=21% Similarity=0.293 Sum_probs=330.1
Q ss_pred HHHHHHHhhCCccccceehhh---hccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHH
Q 013583 23 RLKKVKSELGKAQLGNITVDM---VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 98 (440)
Q Consensus 23 ~~~~l~~~~~~~~~~~~t~~~---~~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~L 98 (440)
.++..|++||.++++++|+|+ +.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~d~~~~~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~I~dLa~~~---------~fEevayL 95 (414)
T 3hwk_A 25 PLAAARSVAATKSMTAPTVDERPDIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQDLAARC---------SFEQVAFL 95 (414)
T ss_dssp -----------------------CCCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHH
T ss_pred eHHHHHHhhCCcccCCccccCCCCCCCCCCCCeeeeeeceEEeCCCCEEEECCeEHHHHHhcC---------CHHHHHHH
Confidence 477889999999999999999 88999999999999999999999 699999999999986 59999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHH
Q 013583 99 LLTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDS 178 (440)
Q Consensus 99 Ll~G~LPt~~el~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a 178 (440)
||+|+|||++|+++|+++|..++.||+++.++|++||+++|||++|+++|++|+++++.. .+ |+..++++
T Consensus 96 Ll~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~vsaL~~~~~~~---------~~-~~~~~~~a 165 (414)
T 3hwk_A 96 LWRGELPTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDE---------DD-AAANRAKA 165 (414)
T ss_dssp HHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHHHHTCTTT---------TC-GGGHHHHH
T ss_pred HHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcCCcc---------cC-HHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998764321 11 89999999
Q ss_pred HHHHHhhHHHHHHHHHHHhcCCcccCCCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhc
Q 013583 179 LNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASA 256 (440)
Q Consensus 179 ~~liA~~p~i~a~~y~~~~~~~~~~~p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt 256 (440)
++|||++|+|+|++||++.+ ..+++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||
T Consensus 166 ~rLiAk~pti~a~~yr~~~g-~~~~~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe-~NaST~taRvvaSt 243 (414)
T 3hwk_A 166 MRMMAVLPTIVAIDMRRRRG-LPPIAPHSGLGYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHG-FNASTFAARVVTST 243 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-CCCCCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-SCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCCCCCCccccHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCC-CChHHHHHHHHHhc
Confidence 99999999999999998855 3588999999999999999975 78999999999999999999 99999999999999
Q ss_pred CcChHHHHHHHHhhhcccccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCccHHHHH
Q 013583 257 LSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQR 336 (440)
Q Consensus 257 ~ad~y~avaAgl~al~GplHGGA~~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DPRa~~L~ 336 (440)
++|+|+|++|||++|+||+|||||++|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+
T Consensus 244 ~ad~ysavaagi~aL~GplHGGAne~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~L~ 316 (414)
T 3hwk_A 244 QSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEI----G---DPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMK 316 (414)
T ss_dssp TCCHHHHHHHHHHHHTSTTTTHHHHHHHHHHHHH----C---SGGGHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCccCChHHHHHHHHHHh----C---CchHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHH
Confidence 9999999999999999999999999999999887 5 46799999999999999999999999999999999999
Q ss_pred HHHHhh---CCCChHHHHHHHHHHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHH
Q 013583 337 EFALKH---LPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIW 413 (440)
Q Consensus 337 ~~a~~~---~~~~~~~~~a~~le~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~E 413 (440)
++++++ .+++++++++.+||+++.+ .|+++||||||+|+++++||||. ++||+||++||++||+||++|
T Consensus 317 ~~a~~l~~~~g~~~~~~~a~~le~~~~~-------~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~E 388 (414)
T 3hwk_A 317 RALERVGTVRDGQRWLDIYQVLAAEMAS-------ATGILPNLDFPTGPAYYLMGFDI-ASFTPIFVMSRITGWTAHIME 388 (414)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH-------HHCCCBCTHHHHHHHHHHHTCCG-GGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHH-------hcCCCCchHHHHHHHHHHhCCCH-HHHHHHHHHHhHHHHHHHHHH
Confidence 999864 4678999999999999865 37999999999999999999995 999999999999999999999
Q ss_pred HHHcCCCccCCCccchhHHH
Q 013583 414 DRALGLPLERPKSVTLDWIE 433 (440)
Q Consensus 414 q~~~~~~i~RP~~~~~~~~~ 433 (440)
|+..+ +|+||+++|+|...
T Consensus 389 q~~~~-riiRPr~~Y~G~~~ 407 (414)
T 3hwk_A 389 QATAN-ALIRPLSAYCGHEQ 407 (414)
T ss_dssp HHHSC-CCCCCEEEECSCCC
T ss_pred HHhcC-CCcCCCceeeCCCC
Confidence 99887 79999999998643
No 3
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=100.00 E-value=3e-102 Score=805.07 Aligned_cols=375 Identities=27% Similarity=0.425 Sum_probs=339.6
Q ss_pred HHHHHHhhCCccccceehhhhccccccccccccccceecCCCCe-eecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhC
Q 013583 24 LKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGI-RFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTG 102 (440)
Q Consensus 24 ~~~l~~~~~~~~~~~~t~~~~~~Gl~g~~~~~t~is~iD~~~Gi-~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G 102 (440)
+++|+++ .|.+|+| +||+|+++++|+||+||+++|+ +||||+|+||++++ +||||+||||+|
T Consensus 38 ~~~l~~~-----~g~~t~~---~Gl~g~~~~~S~Is~idg~~G~L~YRGy~I~dLa~~~---------~feEvayLLl~G 100 (436)
T 2h12_A 38 IRKLPAQ-----LGVFTFD---PGYGETAACNSKITFIDGDKGVLLHRGYPIAQLAENA---------SYEEVIYLLLNG 100 (436)
T ss_dssp CTTHHHH-----HSCEEEC---TTCTTEEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHS
T ss_pred ehhhccc-----CCcEeeC---CccCCCeeeeeeceEEeCCCCEEEECCeEHHHHHhcC---------CHHHHHHHHHcC
Confidence 4566655 5788888 9999999999999999999995 99999999999996 599999999999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHH
Q 013583 103 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLI 182 (440)
Q Consensus 103 ~LPt~~el~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~li 182 (440)
+|||++|+++|+++|..++.+|+++.+++++||+++|||++|+++|++|+++++ +.... ..++..++++++||
T Consensus 101 ~LPt~~el~~f~~~l~~~~~lp~~v~~~~~~~p~~~hPM~~l~~~v~aL~~~~~------~~~~~-~~~~~~~~~a~rLi 173 (436)
T 2h12_A 101 ELPNKAQYDTFTNTLTNHTLLHEQIRNFFNGFRRDAHPMAILCGTVGALSAFYP------DANDI-AIPANRDLAAMRLI 173 (436)
T ss_dssp SCCCHHHHHHHHHHHHTTCSCCGGGHHHHTTSCTTCCHHHHHHHHHHHHGGGCC---------------CCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcCc------ccccC-CCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998532 22111 23467889999999
Q ss_pred HhhHHHHHHHHHHHhcCCcccCCCCCCCHHHHHHhhhcC-------CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhh
Q 013583 183 ARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVAS 255 (440)
Q Consensus 183 A~~p~i~a~~y~~~~~~~~~~~p~~~l~~~~n~l~ml~~-------~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aS 255 (440)
|++|+|+|++||+..|+ .+++|++++||++||++|+.+ +++..+++||++|||||||| +|+||||+||++|
T Consensus 174 Ak~ptiaa~~yr~~~g~-~~~~p~~~ls~a~nfl~ml~g~~~~~~~~~~~~~~~ld~~LiLhADHe-~NaSTftaRvvaS 251 (436)
T 2h12_A 174 AKIPTIAAWAYKYTQGE-AFIYPRNDLNYAENFLSMMFARMSEPYKVNPVLARAMNRILILHADHE-QNASTSTVRLAGS 251 (436)
T ss_dssp HHHHHHHHHHHHHHHTC-CCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHhcCCCCccCCCCHHHHHHHHhhheeecCCC-CchHHHHHHHHHh
Confidence 99999999999988765 478999999999999999964 78999999999999999998 9999999999999
Q ss_pred cCcChHHHHHHHHhhhcccccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCC--CcccccCCCCCCCCCccHH
Q 013583 256 ALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSG--KVVPGFGHGVLRKTDPRYT 333 (440)
Q Consensus 256 t~ad~y~avaAgl~al~GplHGGA~~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~--~~ipGfGH~vy~~~DPRa~ 333 (440)
|++|+|+|++|||++|+||+||||||+|++||++| + +++++++||++.++++ ++||||||||||+.|||++
T Consensus 252 t~ad~ysaiaAgi~aL~GPlHGGAne~v~~ml~ei----~---~~~~v~~~i~~~l~~~~g~~imGFGHrVYk~~DPRa~ 324 (436)
T 2h12_A 252 TGANPFACIAAGIAALWGPAHGGANEAVLKMLARI----G---KKENIPAFIAQVKDKNSGVKLMGFGHRVYKNFDPRAK 324 (436)
T ss_dssp TTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHH----C---SGGGHHHHHHHHHCTTSCCCCTTBCCSSCSSCCHHHH
T ss_pred cCccHHHHHHHHHHhcCCCccCCHHHHHHHHHHHh----c---CchHHHHHHHHHHhccCCCcccCCCccccCCCCCcHH
Confidence 99999999999999999999999999999999987 5 5789999999999955 9999999999999999999
Q ss_pred HHHHHHHhh---CC--CChHHHHHHHHHHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHH
Q 013583 334 CQREFALKH---LP--DDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGIC 408 (440)
Q Consensus 334 ~L~~~a~~~---~~--~~~~~~~a~~le~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~ 408 (440)
+|+++|+++ .+ ++++++++.+||+++.+ +++++.|++|||||||+|+++++||||. ++||+||++||++||+
T Consensus 325 iLk~~a~~l~~~~g~~~~~~~~la~~lE~~al~--~~~~~~k~l~pNVDfysg~i~~~lGiP~-~~ft~lFaisR~~GW~ 401 (436)
T 2h12_A 325 IMQQTCHEVLTELGIKDDPLLDLAVELEKIALS--DDYFVQRKLYPNVDFYSGIILKAMGIPT-SMFTVLFAVARTTGWV 401 (436)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH--SHHHHHTTCCBCTHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHh--hhhccccCCCcChHHHHHHHHHHhCCCh-hhhhhhhhhhccccHH
Confidence 999999987 34 68999999999999854 4466789999999999999999999995 9999999999999999
Q ss_pred HhHHHHHHcC-CCccCCCccchhHHHH
Q 013583 409 SQLIWDRALG-LPLERPKSVTLDWIEK 434 (440)
Q Consensus 409 AH~~Eq~~~~-~~i~RP~~~~~~~~~~ 434 (440)
||++||+.++ .+|+||+|+|+|...+
T Consensus 402 AH~~Eq~~~~~~kI~RPr~~Y~G~~~r 428 (436)
T 2h12_A 402 SQWKEMIEEPGQRISRPRQLYIGAPQR 428 (436)
T ss_dssp HHHHHHHHSTTCCCCCCEEEECSCCCC
T ss_pred HHHHHHHhCCCCceecccccccCCCCC
Confidence 9999999987 5699999999997543
No 4
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=3.4e-102 Score=800.59 Aligned_cols=364 Identities=28% Similarity=0.417 Sum_probs=329.4
Q ss_pred ccceehhhhccccccccccccccceecCCCCe-eecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHH
Q 013583 36 LGNITVDMVIGGMRGMTGLLWETSLLDPDEGI-RFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLS 114 (440)
Q Consensus 36 ~~~~t~~~~~~Gl~g~~~~~t~is~iD~~~Gi-~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~ 114 (440)
+|.+|+|+ ||.|+.+++|+||+|||++|+ +||||+|+||++++ +||||+||||+|+|||++|+++|+
T Consensus 46 ~G~~t~d~---Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~dLa~~~---------~feevayLLl~G~LPt~~el~~f~ 113 (427)
T 3msu_A 46 HGIFTYDP---GFMSTAACESKITYIDGGKGVLLHRGYPIEEWTQKS---------NYRTLCYALIYGELPTDEQVKSFR 113 (427)
T ss_dssp GTEEEECT---TCTTEEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHH
T ss_pred CCCEeeCC---CcCCceEEEEEeeEEeCCCCEEEECCeEHHHHhccC---------CHHHHHHHHHcCcCCCHHHHHHHH
Confidence 58888875 899999999999999999995 99999999999986 599999999999999999999999
Q ss_pred HHHHhhcCCCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHH
Q 013583 115 KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQ 194 (440)
Q Consensus 115 ~~L~~~~~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~ 194 (440)
++|..++.||+++.++|++||+++|||++|+++|++|++++ .+ ...|+..++++++||||+|+|+|++||
T Consensus 114 ~~l~~~~~lp~~~~~~i~~~p~~~hPM~~L~~~v~aL~~~~-------~~---~~~~~~~~~~a~rLiAk~pti~a~~yr 183 (427)
T 3msu_A 114 QEIINKMPVCEHVKAAIAAMPQHTHPMSSLIAGVNVLAAEH-------IH---NGQKESQDEVAKNIVAKIATIAAMAYR 183 (427)
T ss_dssp HHHHHHCCCCHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHH-------HH---TTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhhc-------cC---CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998642 12 224789999999999999999999999
Q ss_pred HHhcCCcccCCCCCCCHHHHHHhhhcC------CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHH
Q 013583 195 RIYKDGKIIPKDDSLDYGGNFSHMLGF------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAAL 268 (440)
Q Consensus 195 ~~~~~~~~~~p~~~l~~~~n~l~ml~~------~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl 268 (440)
++.|+ .+++|++++||++||++||++ |++.++++||++|||||||| +|+||||+||++||++|+|+|++|||
T Consensus 184 ~~~G~-~~~~p~~~ls~a~NfL~ml~~~~~~~~p~~~~~~~ld~~LiLhADHe-~N~ST~taRvvaSt~ad~ysavaAgi 261 (427)
T 3msu_A 184 HNHGK-KFLEPKMEYGYAENFLYMMFADDESYKPDELHIKAMDTIFMLHADHE-QNASTSTVRLSGSTGNSPYAAIIAGI 261 (427)
T ss_dssp HHTTC-CCCCCCTTSCHHHHHHHHHHCSSTTCCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHcCC-CCCCCCCccCHHHHHHHHHhcccccCCCCHHHHHHHHHHHhhccCCC-CChhHHHHHHHHccCCCHHHHHHHHH
Confidence 88754 478999999999999999964 48889999999999999999 99999999999999999999999999
Q ss_pred hhhcccccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCC--cccccCCCCCCCCCccHHHHHHHHHhh----
Q 013583 269 NGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGK--VVPGFGHGVLRKTDPRYTCQREFALKH---- 342 (440)
Q Consensus 269 ~al~GplHGGA~~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~--~ipGfGH~vy~~~DPRa~~L~~~a~~~---- 342 (440)
++|+||+||||||+|++||++| + +++++++||++.+++++ +||||||||||+.|||+++|+++|+++
T Consensus 262 ~aL~GPlHGGAne~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~~i~GFGHrVYk~~DPRa~~Lk~~a~~l~~~~ 334 (427)
T 3msu_A 262 TALWGPAHGGANEAVLKMLSEI----G---STENIDKYIAKAKDKDDPFRLMGFGHRVYKNTDPRATAMKKNCEEILAKL 334 (427)
T ss_dssp HHHTSHHHHCHHHHHHHHHHHH----C---STTHHHHHHHHHHTC-----CCSBCCSSSSSCCHHHHHHHHHTHHHHHHG
T ss_pred HHccCCccCCHHHHHHHHHHHh----c---CchHHHHHHHHHHhCCCCcCcCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 9999999999999999999887 5 45799999999999999 999999999999999999999999875
Q ss_pred -CCCChHHHHHHHHHHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHcC-CC
Q 013583 343 -LPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALG-LP 420 (440)
Q Consensus 343 -~~~~~~~~~a~~le~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~~-~~ 420 (440)
..++++++++.++|+++.+ +++++.|+++||||||+|+++++||||. ++||++|++||++||+||++||+.++ .+
T Consensus 335 g~~~~~~~~la~~le~~a~~--d~~~~~k~l~pNVDfysg~i~~~lGip~-~~ft~lFaisR~~Gw~AH~~Eq~~~p~~r 411 (427)
T 3msu_A 335 GHSDNPLLTVAKKLEEIALQ--DEFFIERKLFSNVDFYSGIILKAMGIPE-DMFTAIFALARTSGWISQWIEMVNDPAQK 411 (427)
T ss_dssp GGCSSHHHHHHHHHHHHHC--------CCCCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CCCCcHHHHHHHHHHHHHhh--cccccccCCCCChHHHHHHHHHHcCCCc-cccceehhHHhHHHHHHHHHHHHhCCCCc
Confidence 2368999999999999976 5788899999999999999999999995 99999999999999999999999973 57
Q ss_pred ccCCCccchhHHH
Q 013583 421 LERPKSVTLDWIE 433 (440)
Q Consensus 421 i~RP~~~~~~~~~ 433 (440)
|+||+|+|+|.-.
T Consensus 412 I~RPr~~Y~G~~~ 424 (427)
T 3msu_A 412 IGRPRQLYTGATN 424 (427)
T ss_dssp CCCCEEEECSCCS
T ss_pred eeCCCceecCCCC
Confidence 9999999998643
No 5
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.6e-101 Score=794.53 Aligned_cols=379 Identities=28% Similarity=0.400 Sum_probs=352.6
Q ss_pred hhCCccccceehhhhccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHH
Q 013583 30 ELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKE 108 (440)
Q Consensus 30 ~~~~~~~~~~t~~~~~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~ 108 (440)
+||.++++.+|++ +.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++
T Consensus 9 ~~~~~~~~~~~~~-~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~i~dLa~~~---------~fEeva~LLl~G~lPt~~ 78 (409)
T 2ibp_A 9 KTTGKILQSPCGP-IIHGLEDVLIKSTSISDIDGEKGILWYRGYRIEELARLS---------TYEEVSYLILYGRLPTKR 78 (409)
T ss_dssp EESSCEECCTTSC-EEGGGTTCEEEEECSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHH
T ss_pred CCCCcccCcCCCC-CCCCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccC---------CHHHHHHHHHCCCCcCHH
Confidence 6899999999998 77999999999999999999999 699999999999996 599999999999999999
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhH----HHhhhccCCCCCCCchHHHHHHHHHh
Q 013583 109 QVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQ----EAYEKGIHKSKYWEPTYEDSLNLIAR 184 (440)
Q Consensus 109 el~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~----~~~~~~~~~~~~~~~~~~~a~~liA~ 184 (440)
|+++|+++|..++.+|+++.+++++||++ |||++|+++|++|++++++. ++|..|.+|.++|+..++++++|||+
T Consensus 79 el~~f~~~l~~~~~lp~~~~~~~~~~p~~-hPM~~l~~~v~aL~~~~~~~~~~~~~~~~g~~k~~~~~~~~~~a~~Lia~ 157 (409)
T 2ibp_A 79 ELEDYINRMKKYRELHPATVEVIRNLAKA-HPMFALEAAVAAEGAYDEDNQKLIEALSVGRYKAEEKELAYRIAEKLVAK 157 (409)
T ss_dssp HHHHHHHHHHHHTSCCHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHCHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHhCCcc-CchHHHHHHHHHHhccCccccchhhhhhcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 99999999999999987764 45777777776789999999999999
Q ss_pred hHHHHHHHHHHHhcCCcccCCCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHH
Q 013583 185 VPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYL 262 (440)
Q Consensus 185 ~p~i~a~~y~~~~~~~~~~~p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~ 262 (440)
+|+|+|++||+..|+ ++++|++++||++||++||.+ |++.++++||++|||||||| +|+||||+|+++||++|+|+
T Consensus 158 ~p~i~a~~y~~~~g~-~~i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg-~naST~aaRv~aSt~ad~~s 235 (409)
T 2ibp_A 158 MPTIVAYHYRFSRGL-EVVRPRDDLGHAANFLYMMFGREPDPLASRGIDLYLILHADHE-VPASTFAAHVVASTLSDLYS 235 (409)
T ss_dssp HHHHHHHHHHHHTTC-CCCCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-CCHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHHHHHHHHcCC-CcccCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCC-CChhHHHHHHHhhcCCcHHH
Confidence 999999999998764 478899999999999999965 78999999999999999998 89999999999999999999
Q ss_pred HHHHHHhhhcccccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhC-CCcccccCCCCCCCCCccHHHHHHHHHh
Q 013583 263 SFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNS-GKVVPGFGHGVLRKTDPRYTCQREFALK 341 (440)
Q Consensus 263 avaAgl~al~GplHGGA~~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~-~~~ipGfGH~vy~~~DPRa~~L~~~a~~ 341 (440)
|++|||++|+||+|||||++|++||+++ + +++++++||++.+++ |++||||||||||+.|||+++|++++++
T Consensus 236 avaagi~aL~GplHGGAne~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~ 308 (409)
T 2ibp_A 236 SVAAAIAALKGPLHGGANEMAVRNYLEI----G---TPAKAKEIVEAATKPGGPKLMGVGHRVYKAYDPRAKIFKEFSRD 308 (409)
T ss_dssp HHHHHHHHHTSTTTSCHHHHHHHHHHHH----C---CGGGHHHHHHHHTSTTCCCCTTBCCSSCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCccCCchHHHHHHHHHh----C---CHHHHHHHHHHHHHhcCCcCcCCCccccCCCCCchHHHHHHHHH
Confidence 9999999999999999999999999887 5 467999999999999 9999999999999999999999999998
Q ss_pred hC---CCC-hHHHHHHHHHHhh--hhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHH
Q 013583 342 HL---PDD-PLFQLVSKLFEVV--PPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDR 415 (440)
Q Consensus 342 ~~---~~~-~~~~~a~~le~~~--~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~ 415 (440)
+. +.+ ++++++.+||+++ .+++ +.|+++||||||+|+++++||||. ++||+||++||++||+||++||+
T Consensus 309 l~~~~~~~g~~~~~a~~le~~~l~~~~~----~~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~Eq~ 383 (409)
T 2ibp_A 309 YVAKFGDPQNLFAIASAIEQEVLSHPYF----QQRKLYPNVDFWSGIAFYYMGIPY-EYFTPIFAMSRVVGWVAHVLEYW 383 (409)
T ss_dssp HHHHHCCTTCHHHHHHHHHHHHHHCHHH----HHTTCCBCGGGTHHHHHHHHTCCG-GGHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHhCCChHHHHHHHHHHHHHccchhh----hhcCCCCChHHHHHHHHHHhCCCH-HhhhhHHHHhccccHHHHHHHHH
Confidence 73 444 9999999999999 5543 358999999999999999999995 99999999999999999999999
Q ss_pred HcCCCccCCCccchhHHHH
Q 013583 416 ALGLPLERPKSVTLDWIEK 434 (440)
Q Consensus 416 ~~~~~i~RP~~~~~~~~~~ 434 (440)
.++ +|+||+++|+|...+
T Consensus 384 ~~~-~i~RP~~~Y~G~~~r 401 (409)
T 2ibp_A 384 ENN-RIFRPRACYIGPHDL 401 (409)
T ss_dssp GGC-CCCCCEEEECSCCCC
T ss_pred hcC-CccCchhhccCCCCC
Confidence 988 599999999997433
No 6
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=100.00 E-value=4.9e-101 Score=787.87 Aligned_cols=368 Identities=24% Similarity=0.337 Sum_probs=318.8
Q ss_pred CCccccceehhh---hccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCH
Q 013583 32 GKAQLGNITVDM---VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSK 107 (440)
Q Consensus 32 ~~~~~~~~t~~~---~~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~ 107 (440)
|++++.++|.++ +.+||+|+.+++|+||+|||++| |+||||+|+||++++ +||||+||||+|+|||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~Gl~gv~~~~T~Is~idg~~g~L~YRGy~I~dLa~~~---------~fEevayLLl~G~LPt~ 88 (404)
T 3o8j_A 18 DTTILQNNTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAEHC---------EFEEVAHLLIHGKLPTR 88 (404)
T ss_dssp -----------------------CCCEESSEEECC-CCCEEETTEEHHHHHHHC---------CHHHHHHHHHTSSCCCH
T ss_pred CcchhhcCcccCCCCCCCCCCCceEeeeeceeeeCCCCEEEECCeEHHHHHhcC---------CHHHHHHHHHcCcCCCH
Confidence 567778888887 77999999999999999999888 699999999999986 59999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHH
Q 013583 108 EQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPV 187 (440)
Q Consensus 108 ~el~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~ 187 (440)
+|+++|+++|..++.||+++.++|++||+++|||++|+++|++|+++++.. .+..++..++++++||||+|+
T Consensus 89 ~el~~f~~~l~~~~~lp~~~~~~~~~~p~~~hPM~~L~~~vsaL~~~~~~~--------~d~~~~~~~~~a~rLiAk~pt 160 (404)
T 3o8j_A 89 DELNAYKSKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEK--------EGHTVSGARDIADKLLASLSS 160 (404)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHTSCTTSCHHHHHHHHHHHHHHHSCCC--------TTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCHHHHHHHHhCCCCCChHHHHHHHHHHHHhcCccc--------ccCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998754432 122346678899999999999
Q ss_pred HHHHHHHHHhcCCcccC-CCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHH
Q 013583 188 VAAYVYQRIYKDGKIIP-KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSF 264 (440)
Q Consensus 188 i~a~~y~~~~~~~~~~~-p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~av 264 (440)
|+|++||.+.++ +++. |++++||++||++||++ |++.++++||++|||||||| +|+||||+|+++||++|+|+|+
T Consensus 161 i~a~~yr~~~g~-~~i~~~~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe-~N~St~taRvvaSt~ad~ysav 238 (404)
T 3o8j_A 161 ILLYWYHYSHNG-ERIQPETDDDSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDVYSAI 238 (404)
T ss_dssp HHHHHHHHHHHC-CCCCCCCCCSSHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-SSHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCC-CChHHHHHHHHHhcCCCHHHHH
Confidence 999999988664 4554 56899999999999976 78999999999999999999 8999999999999999999999
Q ss_pred HHHHhhhcccccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCccHHHHHHHHHhhC-
Q 013583 265 AAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL- 343 (440)
Q Consensus 265 aAgl~al~GplHGGA~~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~- 343 (440)
+|||++|+||+|||||++|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++.
T Consensus 239 aagi~aL~GplHGGAne~v~~ml~~i----~---~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~l~~~a~~l~~ 311 (404)
T 3o8j_A 239 IGAIGALRGPKHGGANEVSLEIQQRY----E---TPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSE 311 (404)
T ss_dssp HHHHHHHTSTTTTCHHHHHHHHHTTC----S---SHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCcCCHHHHHHHHHHHh----c---CchhHHHHHHHHHhcCCcccCCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999765 4 578999999999999999999999999999999999999999873
Q ss_pred --CCChHHHHHHHHHHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHcCCCc
Q 013583 344 --PDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPL 421 (440)
Q Consensus 344 --~~~~~~~~a~~le~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~~i 421 (440)
+++++++++.+||+++.+ .|+++||||||+|+++++||||. ++||++|++||++||+||++||+..+ +|
T Consensus 312 ~~g~~~~~~~a~~le~~~~~-------~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~Eq~~~~-ri 382 (404)
T 3o8j_A 312 EGGSLKMYHIADRLETVMWE-------TKKMFPNLDWFSAVSYNMMGVPT-EMFTPLFVIARVTGWAAHIIEQRQDN-KI 382 (404)
T ss_dssp HHSCCHHHHHHHHHHHHHHH-------HHCCCBCTTTHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHSC-CC
T ss_pred hcCCcHHHHHHHHHHHHHHH-------hcCCCcChHHHHHHHHHHcCCCh-HhHHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 468999999999998843 47999999999999999999995 99999999999999999999999988 58
Q ss_pred cCCCccchhHHHH
Q 013583 422 ERPKSVTLDWIEK 434 (440)
Q Consensus 422 ~RP~~~~~~~~~~ 434 (440)
+||++.|+|...+
T Consensus 383 iRPr~~Y~G~~~r 395 (404)
T 3o8j_A 383 IRPSANYTGPEDR 395 (404)
T ss_dssp CCCCEEECSCCSC
T ss_pred CCCcceecCCCCC
Confidence 9999999997433
No 7
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=100.00 E-value=2.4e-102 Score=802.29 Aligned_cols=368 Identities=25% Similarity=0.409 Sum_probs=335.5
Q ss_pred ccceehhhhccccccccccccccceecCCCCe-eecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHH
Q 013583 36 LGNITVDMVIGGMRGMTGLLWETSLLDPDEGI-RFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLS 114 (440)
Q Consensus 36 ~~~~t~~~~~~Gl~g~~~~~t~is~iD~~~Gi-~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~ 114 (440)
+|.+|+| +||.|+.+++|+||+|||++|+ +||||+|+||++++ +||||+||||+|+|||++|+++|+
T Consensus 37 ~g~~~~d---~Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~dLa~~~---------~feevayLLl~G~LPt~~el~~f~ 104 (426)
T 3l96_A 37 KGVFTFD---PGFTSTTSCESKITFIDGDEGILLHRGFPIDQLATDS---------NYLEVCYILLNGEKPTQEQYDEFK 104 (426)
T ss_dssp HTCCEEC---TTSSSEEEEEESSEEEEGGGTEEEETTEEHHHHHHHS---------CHHHHHHHHHHSSCCCHHHHHHHH
T ss_pred CCcEEeC---CCCCCceEEeEEeEEEECCCCEEEECCeEHHHHHhcC---------CHHHHHHHHHCCcCCCHHHHHHHH
Confidence 4888887 5899999999999999999995 99999999999986 599999999999999999999999
Q ss_pred HHHHhhcCCCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHH
Q 013583 115 KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQ 194 (440)
Q Consensus 115 ~~L~~~~~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~ 194 (440)
++|..++.||+++.++|++||+++|||++|+++|++|++++ ++... ...++..++++++||||+|+|+|++||
T Consensus 105 ~~l~~~~~lp~~~~~~~~~~p~~~hPM~~l~~~vsaL~~~~------~~~~~-~~~~~~~~~~a~rLiAk~pti~a~~yr 177 (426)
T 3l96_A 105 TTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFY------HDSLD-VNNPRHREIAAFRLLSKMPTMAAMCYK 177 (426)
T ss_dssp HHHHHTCSCCHHHHHHHTTSCTTSCHHHHHHHHHTTGGGTC------GGGCC-TTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhC------ccccc-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998753 22221 122567788999999999999999999
Q ss_pred HHhcCCcccCCCCCCCHHHHHHhhhcC-------CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHH
Q 013583 195 RIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAA 267 (440)
Q Consensus 195 ~~~~~~~~~~p~~~l~~~~n~l~ml~~-------~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAg 267 (440)
++.|+ .+++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++||
T Consensus 178 ~~~G~-~~~~p~~~ls~a~nfl~ml~g~~~~~~~p~~~~~~~ld~~LiLhADHe-~N~ST~taRvvaSt~ad~ysaiaAg 255 (426)
T 3l96_A 178 YSIGQ-PFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHE-QNASTSTVRTAGSSGANPFACIAAG 255 (426)
T ss_dssp HHHTC-CCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHTTSCCS-SCHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHCCC-CCCCCCCCCCHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHhhcccCC-CCchHHHHHHHhccCCcHHHHHHHH
Confidence 98764 478999999999999999954 57889999999999999999 9999999999999999999999999
Q ss_pred HhhhcccccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCC--cccccCCCCCCCCCccHHHHHHHHHhhC--
Q 013583 268 LNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGK--VVPGFGHGVLRKTDPRYTCQREFALKHL-- 343 (440)
Q Consensus 268 l~al~GplHGGA~~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~--~ipGfGH~vy~~~DPRa~~L~~~a~~~~-- 343 (440)
|++|+||+|||||++|++||+++ + +++++++||++.+++++ +||||||||||+.|||+++|+++|++++
T Consensus 256 i~aL~GplHGGAne~v~~ml~~i----~---~~~~~~~~v~~~l~~~~~~~I~GfGHrVyk~~DPRa~~l~~~a~~l~~~ 328 (426)
T 3l96_A 256 IASLWGPAHGGANEAALKMLEEI----G---KKENIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKE 328 (426)
T ss_dssp HHHHHTTTTSSHHHHHHHHHHHC----C---SSSSTTTTSGGGCCSSCCTGGGTBCCSSCSSCCTTHHHHHHHHHHHHHH
T ss_pred HHhccCCccCCHHHHHHHHHHHh----c---CchhHHHHHHHHHhCCCCcCcCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999876 5 34689999999999999 9999999999999999999999998752
Q ss_pred -C-CChHHHHHHHHHHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHcCCCc
Q 013583 344 -P-DDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPL 421 (440)
Q Consensus 344 -~-~~~~~~~a~~le~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~~i 421 (440)
+ ++++++++.++|+++.+ +++++.|+++||||||+|+++++||||. ++||++|++||++||+||++||+.++.||
T Consensus 329 ~g~~~~~~~~a~~le~~~~~--~~~~~~k~l~pNVDfysg~i~~~lGip~-~~ft~lFaisR~~Gw~AH~~Eq~~~~~~I 405 (426)
T 3l96_A 329 LGTKDDLLEVAMELENIALN--DPYFIEKKLYPNVDFYSGIILKAMGIPS-SMFTVIFAMARTVGWIAHWSEMHSDGMKI 405 (426)
T ss_dssp TCSCCSSTTHHHHHHHHHHH--CHHHHHHTCCBCHHHHHHHHHHHTTCCT-HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hCCCCHHHHHHHHHHHHHhh--cccccccCCCCchHHHHHHHHHHcCCCc-ccchhhhHHHHHHHHHHHHHHHHhcCCCc
Confidence 3 68999999999999975 4566778999999999999999999995 99999999999999999999999976689
Q ss_pred cCCCccchhHHHH
Q 013583 422 ERPKSVTLDWIEK 434 (440)
Q Consensus 422 ~RP~~~~~~~~~~ 434 (440)
+||+|+|+|.-.+
T Consensus 406 ~RPr~~Y~G~~~r 418 (426)
T 3l96_A 406 ARPRQLYTGYEKR 418 (426)
T ss_dssp CCCEEEECSCCCC
T ss_pred cCCcceecCCCCC
Confidence 9999999997443
No 8
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=1.8e-100 Score=778.10 Aligned_cols=354 Identities=26% Similarity=0.399 Sum_probs=326.0
Q ss_pred hhccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc
Q 013583 43 MVIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRA 121 (440)
Q Consensus 43 ~~~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~ 121 (440)
++.+||+|+++++|+||+||+++| ++||||||+||++++ +||||+||||+|+|||++|+++|+++|..++
T Consensus 1 ~~~~Gl~g~~~~~T~Is~id~~~G~L~YRGy~i~dLa~~~---------~feeva~LLl~G~lPt~~el~~f~~~l~~~~ 71 (367)
T 2p2w_A 1 MIQKGLEGVKICESSICYLDGINGRLYYRGIPVEELAEKS---------TFEETAYFLWYGKLPTKSELEEFKRKMADYR 71 (367)
T ss_dssp CCCTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTC
T ss_pred CCCCcCCCCeeeeeeCeEEECCCCEEEECCeeHHHHHcCC---------CHHHHHHHHHCCCCCCHHHHHHHHHHHHHcc
Confidence 356899999999999999999999 699999999999996 5999999999999999999999999999999
Q ss_pred CCCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCc
Q 013583 122 TVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGK 201 (440)
Q Consensus 122 ~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~ 201 (440)
.+|+++.++|+.+|+++|||++|+++|++|++++ ++ |+..++++++|||++|+|+|++||++.|+ +
T Consensus 72 ~lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~------~~-------~~~~~~~a~~lia~~p~i~a~~y~~~~g~-~ 137 (367)
T 2p2w_A 72 ELPAEALGILYHLPKNLHYIDVLKIFLSIHGSMD------GN-------DEDLREKAIRVASVFPTILAYYYRYSKGK-E 137 (367)
T ss_dssp CCCHHHHHHHTTSCSCCCHHHHHHHHHSCC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred CCCHHHHHHHHhCccCCChHHHHHHHHHHHhccC------CC-------hHHHHHHHHHHHHHHHHHHHHHHHHHcCC-C
Confidence 9999999999999999999999999999998742 11 67889999999999999999999998764 4
Q ss_pred ccCCCCCCCHHHHHHhhhcCCchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccchH
Q 013583 202 IIPKDDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 281 (440)
Q Consensus 202 ~~~p~~~l~~~~n~l~ml~~~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA~~ 281 (440)
+++|++++||++||++|+++..+..+++||++|||||||| +|+||||+||++||++|+|+||+|||++|+||+|||||+
T Consensus 138 ~i~p~~~l~~a~nfl~ml~~~~~~~~~~ld~~LvL~ADHg-~NaSTftaRvvaSt~ad~ysavaagi~aL~GPlHGGAne 216 (367)
T 2p2w_A 138 LIRPRKDLSHVENFYYMMFGERNEKIRLLESAFILLMEQD-INASTFAALVIASTLSDLYSCIVGALGALKGPLHGGASE 216 (367)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCCCTTHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHH
T ss_pred CCCCCCCCCHHHHHHHHhcCCChHHHHHHHHHHhHhccCC-CchHHHHHHHHHhcCccHHHHHHHHHHHccCCccCChHH
Confidence 7889999999999999998744788899999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCccHHHHHHHHHhhCCCChHHHHHHHHHHhhhh
Q 013583 282 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPP 361 (440)
Q Consensus 282 ~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~~~~~~~~~a~~le~~~~~ 361 (440)
+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++.+++++++++.+||+++.+
T Consensus 217 ~v~~ml~ei----~---~~~~~~~~i~~~l~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~ 289 (367)
T 2p2w_A 217 KVPPMLEEI----G---SEDRVEEFVQKCLKEKRKIMGFGHRVYKTYDPRAVFLKRVLQEHFPDSKLFRIASKLEEYIVS 289 (367)
T ss_dssp HHHHHHHHH----C---SGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----c---CchhHHHHHHHHHHcCCccccCCccccCCCCCchHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 999999887 5 467899999999999999999999999999999999999999986678999999999998744
Q ss_pred hHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHcCCCccCCCccchhHHHH
Q 013583 362 ILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEK 434 (440)
Q Consensus 362 ~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~~i~RP~~~~~~~~~~ 434 (440)
++ .|+++||||||+|+++++||||. ++||++|++||++||+||++||+.++ +|+||+++|+|.-.+
T Consensus 290 ----~~-~k~l~pNVDf~sg~v~~~lGip~-~~~t~lFai~R~~Gw~AH~~Eq~~~~-~iiRP~~~Y~G~~~r 355 (367)
T 2p2w_A 290 ----NK-IKNIYPNVDLYSSVLFEELGFPR-NMFTALFATARVVGWTAHVIEYVSDN-KLIRPTSEYVGPMDV 355 (367)
T ss_dssp ----TT-GGGCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCCCCCSCCSC
T ss_pred ----Hh-ccCCCCChHHHHHHHHHHhCCCh-hhhhhHHHHhccccHHHHHHHHHhcC-CccCccccccCCCCC
Confidence 33 68999999999999999999995 99999999999999999999999887 599999999996433
No 9
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=100.00 E-value=2.8e-100 Score=775.21 Aligned_cols=355 Identities=23% Similarity=0.343 Sum_probs=333.2
Q ss_pred ccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcCC
Q 013583 45 IGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATV 123 (440)
Q Consensus 45 ~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~l 123 (440)
.+||+|+++++|+||+||+++| ++||||||+||++++ +||||+||||+|+|||++|+++|+++|..++.+
T Consensus 2 ~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~l 72 (363)
T 2c6x_A 2 HYGLKGITCVETSISHIDGEKGRLIYRGHHAKDIALNH---------SFEEAAYLILFGKLPSTEELQVFKDKLAAERNL 72 (363)
T ss_dssp CGGGTTCCCEEESSEEEETTTTEEEETTEEHHHHHHHS---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSC
T ss_pred CCcCCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCC
Confidence 4899999999999999999999 699999999999996 599999999999999999999999999999999
Q ss_pred CHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCccc
Q 013583 124 PDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKII 203 (440)
Q Consensus 124 p~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~~~ 203 (440)
|+++.++++.+|+++|||++|+++|++|++ + . . .|+..++++++|||++|+|+|++||++.|+ +++
T Consensus 73 p~~~~~~~~~~p~~~hpM~~l~~~v~~l~~-~-~---------~--~~~~~~~~a~~Lia~~p~i~a~~~~~~~g~-~~i 138 (363)
T 2c6x_A 73 PEHIERLIQSLPNNMDDMSVLRTVVSALGE-N-T---------Y--TFHPKTEEAIRLIAITPSIIAYRKRWTRGE-QAI 138 (363)
T ss_dssp CHHHHHHHHHSCSSSCHHHHHHHHHHHHCC-S-S---------C--CSSCCHHHHHHHHHHHHHHHHHHHHHHTTC-CCC
T ss_pred CHHHHHHHHhCcccCCchHHHHHHHHhhcC-C-C---------C--ChHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCc
Confidence 999999999999999999999999999986 1 1 0 178899999999999999999999998754 478
Q ss_pred CCCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccchH
Q 013583 204 PKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 281 (440)
Q Consensus 204 ~p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA~~ 281 (440)
+|++++||++||++|+.+ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||+
T Consensus 139 ~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne 217 (363)
T 2c6x_A 139 APSSQYGHVENYYYMLTGEQPSEAKKKALETYMILATEHG-MNASTFSARVTLSTESDLVSAVTAALGTMKGPLHGGAPS 217 (363)
T ss_dssp CCCTTSCSHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCCCH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCC-CcHHHHHHHHHHhcCccHHHHHHHHHHHcccCccCCchH
Confidence 899999999999999965 78999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCccHHHHHHHHHhhCCCChHHHHHHHHHHhhhh
Q 013583 282 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPP 361 (440)
Q Consensus 282 ~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~~~~~~~~~a~~le~~~~~ 361 (440)
+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++++++++++++.+||+++.+
T Consensus 218 ~v~~~l~~i----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~ 290 (363)
T 2c6x_A 218 AVTKMLEDI----G---EKEHAEAYLKEKLEKGERLMGFGHRVYKTKDPRAEALRQKAEEVAGNDRDLDLALHVEAEAIR 290 (363)
T ss_dssp HHHHHHHTC----C---SSTTHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----C---ChhhHHHHHHHHHHcCCcccCCCCcccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 999999775 5 457899999999999999999999999999999999999999987789999999999999976
Q ss_pred hHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHcCCCccCCCccchhHH
Q 013583 362 ILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWI 432 (440)
Q Consensus 362 ~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~~i~RP~~~~~~~~ 432 (440)
...+||+.|+++||||||+|+++++||||. ++||++|++||++||+||++||+.++ +|+||+++|+|..
T Consensus 291 ~~g~yf~~k~l~pNVD~~sg~i~~~lG~p~-~~~t~lF~i~R~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~~ 359 (363)
T 2c6x_A 291 LLEIYKPGRKLYTNVEFYAAAVMRAIDFDD-ELFTPTFSASRMVGWCAHVLEQAENN-MIFRPSAQYTGAI 359 (363)
T ss_dssp HHHHHSCSSCCCBCTHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHTTTC-CCCCCEEEECSCC
T ss_pred hhccccccCCCCcChHHHHHHHHHHhCCCh-hhhhhhhHHhccccHHHHHHHHHHcC-CccCCccccCCCC
Confidence 333788999999999999999999999995 99999999999999999999999998 7999999999864
No 10
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=100.00 E-value=2.3e-100 Score=777.59 Aligned_cols=353 Identities=25% Similarity=0.381 Sum_probs=320.1
Q ss_pred hccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcC
Q 013583 44 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT 122 (440)
Q Consensus 44 ~~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~ 122 (440)
+.+||+|+.+++|+||+|||++| |+||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.
T Consensus 7 ~~~Gl~gv~~~~t~Is~idg~~g~L~YRGy~I~dLa~~~---------~feev~yLLl~G~lPt~~el~~f~~~l~~~~~ 77 (375)
T 3tqg_A 7 TAKGLRGQSAGETSIATVGKEGHGLTYRGYRIEDLAANA---------TFEEVAYLLLKNKLPTKSELDAYTKKLVNLRS 77 (375)
T ss_dssp ---------CCEESSEEECTTSCCEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCC
T ss_pred cCCccCCCeEeeeeceEEeCCCCEEEECCeeHHHHHhcC---------CHHHHHHHHHcCcCcCHHHHHHHHHHHHHccC
Confidence 34899999999999999999887 699999999999986 59999999999999999999999999999999
Q ss_pred CCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCcc
Q 013583 123 VPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKI 202 (440)
Q Consensus 123 lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~~ 202 (440)
||+++.++|++||+++|||++|+++|++|++++++. .|+..++++++||||+|+|+|++||++.++ .+
T Consensus 78 lp~~~~~~~~~~p~~~hpM~~l~~~v~aL~~~~~~~-----------~~~~~~~~a~~LiAk~p~i~a~~yr~~~g~-~~ 145 (375)
T 3tqg_A 78 LPPALKDTLERIPASSHPMDVMRTGCSMLGNLEPEN-----------GFENEQNIADRLVAIFPAIQCYWYHYSHHG-KR 145 (375)
T ss_dssp CCHHHHHHHHTSCTTSCHHHHHHHHHHHHHHHSCCC-----------SGGGHHHHHHHHHHHHHHHHHHHHHHHHHC-CC
T ss_pred CCHHHHHHHHhCCCCCChHHHHHHHHHHHHhcCCCC-----------ChHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CC
Confidence 999999999999999999999999999998754321 278889999999999999999999988664 57
Q ss_pred cCCCCC-CCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccc
Q 013583 203 IPKDDS-LDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLA 279 (440)
Q Consensus 203 ~~p~~~-l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA 279 (440)
+.|+++ +||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||
T Consensus 146 i~p~~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe-~n~St~tarvvaSt~ad~ysavaagi~aL~GplHGGA 224 (375)
T 3tqg_A 146 IDTELDDLTLAGYFLHLLLGKKAAQMAIDCMNASLILYAEHE-FNASTFAARVCSATLSDIYSAVTAAIATLRGPLHGGA 224 (375)
T ss_dssp CCCCCCCSSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCH
T ss_pred cCCCCccccHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CCHHHHHHHHHHccCCCHHHHHHHHHHhccCcccCCH
Confidence 888887 9999999999976 78999999999999999999 8999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCccHHHHHHHHHhhC---CCChHHHHHHHHH
Q 013583 280 NQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDDPLFQLVSKLF 356 (440)
Q Consensus 280 ~~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~---~~~~~~~~a~~le 356 (440)
|++|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. +++++++++.++|
T Consensus 225 ne~v~~ml~~i----~---~~~~~~~~v~~~~~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~a~~le 297 (375)
T 3tqg_A 225 NEAAMDLIMLY----K---TPSEAIAGIKRKLANKELIMGFGHAVYRERDPRNAIIKSWAQKLAPNAADGYLFDISDAIE 297 (375)
T ss_dssp HHHHHHHHTTC----S---SHHHHHHHHHHHHHTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHTTTSTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHh----c---ChhHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 99999999765 4 568999999999999999999999999999999999999999873 4689999999999
Q ss_pred HhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHcCCCccCCCccchhHHHH
Q 013583 357 EVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEK 434 (440)
Q Consensus 357 ~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~~i~RP~~~~~~~~~~ 434 (440)
+++.+ .|+++||||||+|+++++||||. ++||++|++||++||+||++||+..+ +|+||++.|+|...+
T Consensus 298 ~~~~~-------~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFa~sR~~Gw~AH~~Eq~~~~-~iiRP~~~Y~G~~~r 366 (375)
T 3tqg_A 298 NTMQD-------EKKLFPNLDFYSATAYHFLNIPT-KLFTPIFVMSRVTGWCAHIFEQRKDN-RIIRPNADYIGPEEQ 366 (375)
T ss_dssp HHHHH-------HHCCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHSC-CCCCCEEEECSCCCB
T ss_pred HHHHH-------hcCCCCChHHHHHHHHHHcCCCH-HHHHHHHHHHhHHHHHHHHHHHHhcC-CCCCCcceecCCCCC
Confidence 99854 37999999999999999999995 99999999999999999999999988 589999999997443
No 11
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=100.00 E-value=1.4e-99 Score=773.94 Aligned_cols=359 Identities=27% Similarity=0.391 Sum_probs=331.8
Q ss_pred hccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcC
Q 013583 44 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT 122 (440)
Q Consensus 44 ~~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~ 122 (440)
+.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.
T Consensus 4 ~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~feeva~LL~~G~lPt~~el~~f~~~l~~~~~ 74 (377)
T 1o7x_A 4 VSKGLENVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYG---------SYEETIYLMLYGKLPTKKELNDLKAKLNEEYE 74 (377)
T ss_dssp BCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCC
T ss_pred CCcccCCCeeeeeeCeEEECCCCEEEECCccHHHHHcCC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHccC
Confidence 34899999999999999999999 699999999999996 59999999999999999999999999999999
Q ss_pred CCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCcc
Q 013583 123 VPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKI 202 (440)
Q Consensus 123 lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~~ 202 (440)
+|+++.++++.+|+++|||++|+++|++|++++ ++. + .|+..++++++|||++|+|+|++||++.|+ ++
T Consensus 75 lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~------~~~--~--~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~ 143 (377)
T 1o7x_A 75 VPQEVLDTIYLMPKEADAIGLLEVGTAALASID------KNF--K--WKENDKEKAISIIAKMATLVANVYRRKEGN-KP 143 (377)
T ss_dssp CCHHHHHHHHHSCTTSCHHHHHHHHHHHHHHHC------CCC--C--SSSSHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred CCHHHHHHHHhCcccCCcHHHHHHHHHHHhhcC------CCc--C--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CC
Confidence 999999999999999999999999999998742 222 1 288999999999999999999999998764 47
Q ss_pred cCCCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccch
Q 013583 203 IPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLAN 280 (440)
Q Consensus 203 ~~p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA~ 280 (440)
++|++++||++||++|+.+ +++.++++||++|||||||| +|+||||+||++||++|+|+|++|||++|+||+|||||
T Consensus 144 i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~ad~~savaagi~aL~GplHGGAn 222 (377)
T 1o7x_A 144 RIPEPSDSFAKSFLLASFAREPTTDEINAMDKALILYTDHE-VPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAA 222 (377)
T ss_dssp CCCCCCSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-CCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHH
T ss_pred CCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCC-CChHHHHHHHHHhcCCcHHHHHHHHHHhcCCCCCCChH
Confidence 8899999999999999975 78999999999999999998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCChhhHHHHHHHHH-hCCCcccccCCCCCCCCCccHHHHHHHHHhhC---CC-ChHHHHHHHH
Q 013583 281 QEVLLWIKSVVDECGENVTTEQLKDYVWKTL-NSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PD-DPLFQLVSKL 355 (440)
Q Consensus 281 ~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l-~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~---~~-~~~~~~a~~l 355 (440)
++|++||+++ + +++++++||++.+ ++|++||||||||||+.|||+++|+++++++. ++ +++++++.+|
T Consensus 223 e~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~~a~~l 295 (377)
T 1o7x_A 223 EEAFKQFIEI----G---DPNRVQNWFNDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKL 295 (377)
T ss_dssp HHHHHHHHHH----C---SGGGHHHHHHHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----C---ChhHHHHHHHHHHHhcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 9999999887 5 4679999999999 99999999999999999999999999999883 45 7899999999
Q ss_pred HHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHc-CCCccCCCccchhHHHH
Q 013583 356 FEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRAL-GLPLERPKSVTLDWIEK 434 (440)
Q Consensus 356 e~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~-~~~i~RP~~~~~~~~~~ 434 (440)
|+++.++ ++.|+++||||||+|+++++||||. ++||++|++||++||+||++||+.+ + +|+||+++|+|...+
T Consensus 296 e~~~~~~----~~~k~l~pNVD~~sg~v~~~lG~p~-~~~t~lF~i~R~~Gw~AH~~Eq~~~~~-~i~RP~~~Y~G~~~r 369 (377)
T 1o7x_A 296 EELGIKQ----FSSKGIYPNTDFYSGIVFYALGFPV-YMFTALFALSRTLGWLAHIIEYVEEQH-RLIRPRALYVGPEYQ 369 (377)
T ss_dssp HHHHHHH----HTTTTCCBCTTTTHHHHHHHHTCCG-GGHHHHHHHHHHHHHHHHHHHHHHHSC-CCCCCEEEECSCSCC
T ss_pred HHHHHHH----HhhcCCCCChHHHHHHHHHHhCCCh-hhhhhHHHHhhhccHHHHHHHHHhccC-CccCCcccccCCCCC
Confidence 9998764 3678999999999999999999995 9999999999999999999999999 6 899999999997444
Q ss_pred Hh
Q 013583 435 NC 436 (440)
Q Consensus 435 ~~ 436 (440)
.|
T Consensus 370 ~~ 371 (377)
T 1o7x_A 370 EY 371 (377)
T ss_dssp --
T ss_pred CC
Confidence 33
No 12
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=100.00 E-value=6.5e-99 Score=769.13 Aligned_cols=358 Identities=26% Similarity=0.386 Sum_probs=331.5
Q ss_pred ccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcCC
Q 013583 45 IGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATV 123 (440)
Q Consensus 45 ~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~l 123 (440)
.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.+
T Consensus 4 ~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~l 74 (377)
T 1iom_A 4 ARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKS---------SFEETTFLLLHGRLPRRQELEEFSAALARRRAL 74 (377)
T ss_dssp CGGGTTCCCSCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSC
T ss_pred CcccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999 699999999999996 599999999999999999999999999999999
Q ss_pred CHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCccc
Q 013583 124 PDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKII 203 (440)
Q Consensus 124 p~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~~~ 203 (440)
|+++.++|+++|+++|||++|+++|++|+++++. . .+.+|+..++++++|||++|+|+|++||++.|+ +++
T Consensus 75 p~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~~~-------~-~~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i 145 (377)
T 1iom_A 75 PAHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPT-------E-GDISREALYEKGLDLIAKFATIVAANKRLKEGK-EPI 145 (377)
T ss_dssp CHHHHHHHTTSCTTSCHHHHHHHHHHHHHHTCTT-------T-TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCC
T ss_pred CHHHHHHHHhCCcCCCchhHHHHHHHHHhccCCC-------c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCC
Confidence 9999999999999999999999999999975321 1 123688889999999999999999999998764 478
Q ss_pred CCCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccchH
Q 013583 204 PKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 281 (440)
Q Consensus 204 ~p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA~~ 281 (440)
+|++++||++||++|+++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||+
T Consensus 146 ~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne 224 (377)
T 1iom_A 146 PPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHG-FNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANE 224 (377)
T ss_dssp CCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHH
T ss_pred CCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CCchHHHHHHHhhcCCcHHHHHHHHHHHcccCccCChhH
Confidence 899999999999999975 78999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCccHHHHHHHHHhhC---CCChHHHHHHHHHHh
Q 013583 282 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDDPLFQLVSKLFEV 358 (440)
Q Consensus 282 ~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~---~~~~~~~~a~~le~~ 358 (440)
+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. +++++++++.+||++
T Consensus 225 ~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~a~~le~~ 297 (377)
T 1iom_A 225 AVMRMIQEI----G---TPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEE 297 (377)
T ss_dssp HHHHHHHHH----C---SHHHHHHHHHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHh----c---CchhHHHHHHHHHHCCCcccCCCCcccCCCCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 999999887 5 578999999999999999999999999999999999999999873 678999999999999
Q ss_pred hhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHH-cCCCccCCCccchhHHHH
Q 013583 359 VPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRA-LGLPLERPKSVTLDWIEK 434 (440)
Q Consensus 359 ~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~-~~~~i~RP~~~~~~~~~~ 434 (440)
+.+ +++ .|+++||||||+|+++++||||. ++||++|++||++||+||++||+. .+ +|+||+++|+|.-.+
T Consensus 298 ~~~---~~~-~k~l~pNVD~~sg~i~~~lG~p~-~~~t~lF~i~R~~Gw~AH~~Eq~~~~~-~i~RP~~~Y~G~~~r 368 (377)
T 1iom_A 298 AGK---VLN-PRGIYPNVDFYSGVVYSDLGFSL-EFFTPIFAVARISGWVGHILEYQELDN-RLLRPGAKYVGELDV 368 (377)
T ss_dssp HHH---HHT-TTTCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCCCCSCSSC
T ss_pred HHH---Hhc-cCCCCCChHHHHHHHHHHcCCCH-HhhhhHHHHhccccHHHHHHHHHhhcC-CcccccccccCCCCC
Confidence 864 134 68999999999999999999995 999999999999999999999999 55 799999999996433
No 13
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=4e-99 Score=770.91 Aligned_cols=355 Identities=23% Similarity=0.337 Sum_probs=330.3
Q ss_pred cccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcCCC
Q 013583 46 GGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVP 124 (440)
Q Consensus 46 ~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~lp 124 (440)
+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.+|
T Consensus 7 ~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp 77 (378)
T 1vgm_A 7 RGLENVIIKTTGLTYIDGINGILRYRGYDINDLVNYA---------SYEELIHLMLYGELPNRQQLNQIKGIINESFEVP 77 (378)
T ss_dssp GGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCC
T ss_pred CccCCCeeeeeeceEEECCCCeEEEcCeeHHHHHhcC---------CHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCC
Confidence 899999999999999999999 699999999999986 5999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCcccC
Q 013583 125 DYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIP 204 (440)
Q Consensus 125 ~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~~~~ 204 (440)
+++.++++++|+++|||++|+++|++|+++ |++.. + |+..++++++|||++|+|+|++||++.|+ ++++
T Consensus 78 ~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~------~~~~~---~-~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i~ 146 (378)
T 1vgm_A 78 EQVISTIFSMPRNCDAIGMMETAFGILASI------YDPKW---N-RATNKELAVQIIAKTATITANIYRAKEGL-KPKI 146 (378)
T ss_dssp HHHHHHHTTSCTTSCHHHHHHHHHHHHHHH------HCCCC---C-TTTHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHhcc------CCccC---C-HHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCCC
Confidence 999999999999999999999999999873 22221 2 78899999999999999999999998754 4788
Q ss_pred CCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccchHH
Q 013583 205 KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQE 282 (440)
Q Consensus 205 p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA~~~ 282 (440)
|++++||++||++|+.+ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||++
T Consensus 147 p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~ 225 (378)
T 1vgm_A 147 PEPSESYAESFLAATFGKKPTQEEIKAMDASLILYTDHE-VPASTTAALVASSTLSDMYSCIVAALAALKGPLHGGAAEE 225 (378)
T ss_dssp CCCCSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCC-CchHHHHHHHHHhcCCcHHHHHHHHHHhccCCCCCChHHH
Confidence 99999999999999965 78999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHHHHHHH-hCCCcccccCCCCCCCCCccHHHHHHHHHhhC---C-CChHHHHHHHHHH
Q 013583 283 VLLWIKSVVDECGENVTTEQLKDYVWKTL-NSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---P-DDPLFQLVSKLFE 357 (440)
Q Consensus 283 ~~~~l~~i~~~ig~~~~~~~~~~~v~~~l-~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~---~-~~~~~~~a~~le~ 357 (440)
|++||+++ + +++++++||++.+ ++|++||||||||||+.|||+++|+++++++. + ++++++++.+||+
T Consensus 226 v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~ 298 (378)
T 1vgm_A 226 AFKQFVEI----G---SVENADKWFEEKIIKGKSRLMGFGHRVYKTYDPRAKIFKTLAKSFAEKNENVKKYYEIAERIEK 298 (378)
T ss_dssp HHHHHHHH----C---SGGGHHHHHHHHTTTSCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh----C---CHhHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999887 5 4679999999999 99999999999999999999999999999873 4 5689999999999
Q ss_pred hhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHc-CCCccCCCccchhHHHH
Q 013583 358 VVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRAL-GLPLERPKSVTLDWIEK 434 (440)
Q Consensus 358 ~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~-~~~i~RP~~~~~~~~~~ 434 (440)
++.+++ +.|+++||||||+|+++++||||. ++||++|++||++||+||++||+.+ + +|+||+++|+|...+
T Consensus 299 ~~~~~~----~~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~Eq~~~~~-~i~RP~~~Y~G~~~r 370 (378)
T 1vgm_A 299 LGVDTF----GSKHIYPNTDFYSGIVFYALGFPI-YMFTSLFALSRVLGWLAHIIEYVEEQH-RLIRPRALYIGPEKR 370 (378)
T ss_dssp HHHHHH----GGGTCCBCTTTTHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHHSC-CCCCCEEEECSCCCC
T ss_pred HHHHHH----hhCCCCCChHHHHHHHHHHhCCCH-HhhhHHHHHHhhccHHHHHHHHHhccC-CccCcccccCCCCCC
Confidence 987643 568999999999999999999995 9999999999999999999999999 6 899999999997433
No 14
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=7.3e-99 Score=769.90 Aligned_cols=360 Identities=24% Similarity=0.334 Sum_probs=330.3
Q ss_pred hccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcC
Q 013583 44 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT 122 (440)
Q Consensus 44 ~~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~ 122 (440)
+.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.
T Consensus 5 ~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~ 75 (378)
T 1a59_A 5 IHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKC---------SFEQVAYLLWNSELPNDSELKAFVNFERSHRK 75 (378)
T ss_dssp CCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCccCCCeeeeeeceEEECCCCeEEEcCccHHHHHhcC---------CHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCC
Confidence 55999999999999999999999 699999999999996 59999999999999999999999999999999
Q ss_pred CCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCcc
Q 013583 123 VPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKI 202 (440)
Q Consensus 123 lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~~ 202 (440)
+|+++.++++++|+++|||++|+++|++|+++++. . .+.+|+..++++++|||++|+|+|++||+.+|+ ++
T Consensus 76 lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~~~-------~-~~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~ 146 (378)
T 1a59_A 76 LDENVKGAIDLLSTACHPMDVARTAVSVLGANHAR-------A-QDSSPEANLEKAMSLLATFPSVVAYDQRRRRGE-EL 146 (378)
T ss_dssp CCHHHHHHHTTSCTTSCHHHHHHHHHHHHHHTCTT-------T-TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred CCHHHHHHHHhCCCCCCcHHHHHHHHHHHHhcCCC-------c-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CC
Confidence 99999999999999999999999999999975321 1 123688899999999999999999999998764 47
Q ss_pred cCCCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccch
Q 013583 203 IPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLAN 280 (440)
Q Consensus 203 ~~p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA~ 280 (440)
++|++++||++||++|+++ |++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||
T Consensus 147 i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAn 225 (378)
T 1a59_A 147 IEPREDLDYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHS-FNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGAN 225 (378)
T ss_dssp CCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCC-CCchHHHHHHHhhcCCcHHHHHHHHHHHccCCccCCch
Confidence 8899999999999999975 78999999999999999998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCC---hhhHHHHHHHHHhCCCcccccCCCCCCCCCccHHHHHHHHHhhC---CCChHHHHHHH
Q 013583 281 QEVLLWIKSVVDECGENVT---TEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDDPLFQLVSK 354 (440)
Q Consensus 281 ~~~~~~l~~i~~~ig~~~~---~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~---~~~~~~~~a~~ 354 (440)
++|++||+++.+. +++.+ .+++++||++.+++|++||||||||||+.|||+++|+++++++. +++++++++.+
T Consensus 226 e~v~~~l~~i~~~-~~~~~~~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~~~~a~~ 304 (378)
T 1a59_A 226 EAVMHTFEEIGIR-KDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNG 304 (378)
T ss_dssp HHHHHHHHHSCCC-SSCCHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHH
T ss_pred HHHHHHHHHHhhc-CCccccchHHHHHHHHHHHHhCCCeeeCCCCcccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 9999999987432 21111 27899999999999999999999999999999999999999873 67899999999
Q ss_pred HHHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHcCCCccCCCccchhHH
Q 013583 355 LFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWI 432 (440)
Q Consensus 355 le~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~~i~RP~~~~~~~~ 432 (440)
||+++.+ .|+++||||||+|+++++||||. ++||+||++||++||+||++||++++ +|+||++.|+|.-
T Consensus 305 le~~~~~-------~k~l~pNVD~~sg~i~~~lGip~-~~~t~lF~isR~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~~ 373 (378)
T 1a59_A 305 LEAAMEE-------AKQIKPNLDYPAGPTYNLMGFDT-EMFTPLFIAARITGWTAHIMEQVADN-ALIRPLSEYNGPE 373 (378)
T ss_dssp HHHHHHH-------HHCCCBCTHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCCCCSCC
T ss_pred HHHHHHH-------HhCCCCChHHHHHHHHHHhCCCh-hhcchhhhhhcchhHHHHHHHHHhcC-CCcCchhhccCCC
Confidence 9999854 27999999999999999999995 99999999999999999999999988 5999999999863
No 15
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=6.8e-99 Score=767.49 Aligned_cols=354 Identities=26% Similarity=0.372 Sum_probs=330.4
Q ss_pred cccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcCCC
Q 013583 46 GGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVP 124 (440)
Q Consensus 46 ~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~lp 124 (440)
+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.+|
T Consensus 3 ~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~---------~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~lp 73 (371)
T 1aj8_A 3 KGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELS---------TFEEVVYLLWWGKLPSLSELENFKKELAKSRGLP 73 (371)
T ss_dssp GGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCC
T ss_pred CCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccC---------CHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCCC
Confidence 799999999999999999999 699999999999996 5999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCC-CCCchHHHHHHHHHhhHHHHHHHHHHHhcCCccc
Q 013583 125 DYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSK-YWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKII 203 (440)
Q Consensus 125 ~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~~~ 203 (440)
+++.++++.||+++|||++|+++|++|+++++ +. .+. +|+..++++++|||++|+|+|++||++.|+ +++
T Consensus 74 ~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~~-------~~-~~~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i 144 (371)
T 1aj8_A 74 KEVIEIMEALPKNTHPMGALRTIISYLGNIDD-------SG-DIPVTPEEVYRIGISVTAKIPTIVANWYRIKNGL-EYV 144 (371)
T ss_dssp HHHHHHHHHSCTTCCHHHHHHHHHHHHHHHST-------TT-TSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCC
T ss_pred HHHHHHHHhCCCCCChHHHHHHHHHHHhccCC-------cc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCC
Confidence 99999999999999999999999999987432 11 222 688899999999999999999999998764 478
Q ss_pred CCCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccchH
Q 013583 204 PKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 281 (440)
Q Consensus 204 ~p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA~~ 281 (440)
+|++++||++||++|+++ |++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||+
T Consensus 145 ~p~~~ls~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne 223 (371)
T 1aj8_A 145 PPKEKLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHE-INASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVE 223 (371)
T ss_dssp CCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHH
T ss_pred CCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCC-CChhHHHHHHHhhcCCcHHHHHHHHHHHcCCCccCCchH
Confidence 899999999999999965 78999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCccHHHHHHHHHhhCCCChHHHHHHHHHHhhhh
Q 013583 282 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPP 361 (440)
Q Consensus 282 ~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~~~~~~~~~a~~le~~~~~ 361 (440)
+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++ +++++++++.+||+++.+
T Consensus 224 ~v~~~l~~i----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~~~~~-~~~~~~~~a~~le~~~~~ 295 (371)
T 1aj8_A 224 EAIKQFMEI----G---SPEKVEEWFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKL-GDKKLFEIAERLERLVEE 295 (371)
T ss_dssp HHHHHHHHH----C---SGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----c---CchhHHHHHHHHHHcCCeeecCCccccCCCCccHHHHHHHHHHc-CCCHHHHHHHHHHHHHHH
Confidence 999999887 5 46789999999999999999999999999999999999999998 678999999999998743
Q ss_pred hHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHcCCCccCCCccchhHH
Q 013583 362 ILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWI 432 (440)
Q Consensus 362 ~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~~i~RP~~~~~~~~ 432 (440)
+++.|+++||||||+|+++++||||. ++||++|++||++||+||++||++++ +|+||+++|+|.-
T Consensus 296 ----~~~~k~l~pNVD~~sg~i~~~lGip~-~~~t~lF~i~R~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~~ 360 (371)
T 1aj8_A 296 ----YLSKKGISINVDYWSGLVFYGMKIPI-ELYTTIFAMGRIAGWTAHLAEYVSHN-RIIRPRLQYVGEI 360 (371)
T ss_dssp ----HTTTTTCCBCTTTTHHHHHHTTTCCG-GGHHHHHHHHHHHHHHHHHHHHHTTC-CCCCCEEEECSCC
T ss_pred ----hccCCCCCCChHHHHHHHHHHcCCCH-HhhhhHHHHhccccHHHHHHHHHhcC-CccCchhhccCCC
Confidence 46679999999999999999999995 99999999999999999999999988 6999999999964
No 16
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=7.2e-99 Score=770.67 Aligned_cols=358 Identities=23% Similarity=0.351 Sum_probs=332.4
Q ss_pred hccccccccccccccceecCCCC-eeecCCCHHHHhh-hCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc
Q 013583 44 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQK-LLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRA 121 (440)
Q Consensus 44 ~~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~-~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~ 121 (440)
+.+||+|+++++|+||+||+++| ++||||+|+||++ ++ +||||+||||+|+|||++|+++|+++|..++
T Consensus 7 ~~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~---------~fEeva~LLl~G~lPt~~el~~f~~~l~~~~ 77 (385)
T 2ifc_A 7 ISKGLEDVNIKWTRLTTIDGNKGILRYGGYSVEDIIASGA---------QDEEIQYLFLYGNLPTEQELRKYKETVQKGY 77 (385)
T ss_dssp BCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHTTC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHGGG
T ss_pred CCCCcCCCeeeeeeCeEEECCCCEEEECCccHHHHHhcCC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc
Confidence 45999999999999999999999 6999999999999 64 5999999999999999999999999999999
Q ss_pred CCCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCc
Q 013583 122 TVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGK 201 (440)
Q Consensus 122 ~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~ 201 (440)
.+|+++.++++.+|+++|||++|+++|++|++++ ++. +++|+..++++++|||++|+|+|++||+..|+ +
T Consensus 78 ~lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~------~~~---~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~ 147 (385)
T 2ifc_A 78 KIPDFVINAIRQLPRESDAVAMQMAAVAAMAASE------TKF---KWNKDTDRDVAAEMIGRMSAITVNVYRHIMNM-P 147 (385)
T ss_dssp CCCHHHHHHHHTSCTTSCHHHHHHHHHHHHHHHC------TTC---CCCTTTHHHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred CCCHHHHHHHHhCCCCCCchHHHHHHHHHHHhcC------Ccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C
Confidence 9999999999999999999999999999998742 222 14689999999999999999999999998754 4
Q ss_pred ccCCCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccc
Q 013583 202 IIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLA 279 (440)
Q Consensus 202 ~~~p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA 279 (440)
+++|++++||++||++|+.+ +++.++++||++|||||||| +|+||||+||++||++|+|+|++|||++|+||+||||
T Consensus 148 ~i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGA 226 (385)
T 2ifc_A 148 AELPKPSDSYAESFLNAAFGRKATKEEIDAMNTALILYTDHE-VPASTTAGLVAVSTLSDMYSGITAALAALKGPLHGGA 226 (385)
T ss_dssp CCCCCCCSCHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSSH
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCC-ccHHHHHHHHHHhcCCcHHHHHHHHHHHccCCccCCh
Confidence 78899999999999999975 78999999999999999998 8999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCChhhHHHHHHHHH-hCCCcccccCCCCCCCCCccHHHHHHHHHhh----CCCChHHHHHHH
Q 013583 280 NQEVLLWIKSVVDECGENVTTEQLKDYVWKTL-NSGKVVPGFGHGVLRKTDPRYTCQREFALKH----LPDDPLFQLVSK 354 (440)
Q Consensus 280 ~~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l-~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~----~~~~~~~~~a~~ 354 (440)
|++|++||+++ + +++++++||++.+ ++|++||||||||||+.|||+++|+++++++ .+++++++++.+
T Consensus 227 ne~v~~ml~ei----~---~~~~~~~~i~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~ 299 (385)
T 2ifc_A 227 AEAAIAQFDEI----K---DPAMVEKWFNDNIINGKKRLMGFGHRVYKTYDPRAKIFKGIAEKLSSKKPEVHKVYEIATK 299 (385)
T ss_dssp HHHHHHHHHHH----C---SGGGHHHHHHHHTTTSSSCCTTBCCSSCSSCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh----C---CHHHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 99999999887 5 4679999999999 9999999999999999999999999999988 346789999999
Q ss_pred HHHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcc--cchhhHHhhhhhhhHHHhHHHHHHc-CCCccCCCccchhH
Q 013583 355 LFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEA--RYYTVLFGVSRSLGICSQLIWDRAL-GLPLERPKSVTLDW 431 (440)
Q Consensus 355 le~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~--~~~t~lF~isR~~Gw~AH~~Eq~~~-~~~i~RP~~~~~~~ 431 (440)
||+++.+++ +.|+++||||||+|+++++|||| . ++||++|++||++||+||++||+.+ + +|+||+++|+|.
T Consensus 300 le~~~~~~~----~~k~l~pNVD~~sg~v~~~lGip-~~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~-~i~RP~~~Y~G~ 373 (385)
T 2ifc_A 300 LEDFGIKAF----GSKGIYPNTDYFSGIVYMSIGFP-LRNNIYTALFALSRVTGWQAHFIEYVEEQQ-RLIRPRAVYVGP 373 (385)
T ss_dssp HHHHHHHHH----GGGTCCBCTTTTHHHHHHHHTCC-SGGGHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEECSC
T ss_pred HHHHHHHHH----hhcCCCCChHHHHHHHHHHcCCC-cchhhhhhHHHHhhcccHHHHHHHHHhccC-CccCcccccCCC
Confidence 999987643 56899999999999999999998 7 8999999999999999999999999 7 799999999997
Q ss_pred HHH
Q 013583 432 IEK 434 (440)
Q Consensus 432 ~~~ 434 (440)
..+
T Consensus 374 ~~r 376 (385)
T 2ifc_A 374 AER 376 (385)
T ss_dssp CCC
T ss_pred cCC
Confidence 433
No 17
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.5e-98 Score=765.88 Aligned_cols=354 Identities=27% Similarity=0.411 Sum_probs=328.8
Q ss_pred hccccccccccccccceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcC
Q 013583 44 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT 122 (440)
Q Consensus 44 ~~~Gl~g~~~~~t~is~iD~~~G-i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~ 122 (440)
+.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.
T Consensus 3 ~~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~---------~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~ 73 (373)
T 1vgp_A 3 IKKGLEDVYVKETEITYIDGELGRLYYRGYSIYDLAEFS---------NFEEVSYLILYGKLPNREELNWFQEKLREERY 73 (373)
T ss_dssp CCTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCC
T ss_pred CCCccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHccC
Confidence 34899999999999999999999 699999999999996 59999999999999999999999999999999
Q ss_pred CCHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhHHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCcc
Q 013583 123 VPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKI 202 (440)
Q Consensus 123 lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~liA~~p~i~a~~y~~~~~~~~~ 202 (440)
+|+++.++|+.+|+++|||++|+++|++|++++ . . + |+..++++++|||++|+|+|++||+.+|+ ++
T Consensus 74 lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~-------~-~---~-~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~ 140 (373)
T 1vgp_A 74 LPDFIIKFLREVRKDAQPMDILRTAVSLLGIED-------S-K---N-DERTDIKGIKLISKFPTIVANYARLRKGL-DI 140 (373)
T ss_dssp CCHHHHHHHHHSCTTSCHHHHHHHHHHHHHHHC-------C-C---C-SSCHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred CCHHHHHHHHhCCCCCChHHHHHHHHHHHhccC-------C-C---C-hHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CC
Confidence 999999999999999999999999999998732 1 1 2 78899999999999999999999998765 47
Q ss_pred cCCCCCCCHHHHHHhhhcC--CchHHHHHHHHHHHHhcCCCCCCCchhHHHHHhhcCcChHHHHHHHHhhhcccccccch
Q 013583 203 IPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLAN 280 (440)
Q Consensus 203 ~~p~~~l~~~~n~l~ml~~--~~~~~~~~l~~~Lvl~ADHeg~n~St~aaRv~aSt~ad~y~avaAgl~al~GplHGGA~ 280 (440)
++|++++||++||++|+++ |++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||
T Consensus 141 i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~ST~aaRv~aSt~ad~~savaagi~aL~GplHGGAn 219 (373)
T 1vgp_A 141 IEPDPKLSHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHE-MNASTFASLVVASTFSDLYSSIVAGISALKGPLHGGAN 219 (373)
T ss_dssp CCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCS-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHTCTTSSSCC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CchHHHHHHHHHhcCccHHHHHHHHHHhcCCCCcCCHH
Confidence 8899999999999999975 78999999999999999998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCccHHHHHHHHHhhC---CCC--hHHHHHHHH
Q 013583 281 QEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDD--PLFQLVSKL 355 (440)
Q Consensus 281 ~~~~~~l~~i~~~ig~~~~~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DPRa~~L~~~a~~~~---~~~--~~~~~a~~l 355 (440)
++|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. +.+ ++++++.+|
T Consensus 220 e~v~~ml~~i----~---~~~~~~~~i~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~~~a~~l 292 (373)
T 1vgp_A 220 YEALKMFKEI----G---SPEKVNDYILNRLSNKQRIMGFGHRVYKTYDPRARILKQYAKLLAEKEGGEIYTLYQIAEKV 292 (373)
T ss_dssp CHHHHHHHHS----C---SSSSHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----c---CchhHHHHHHHHHHcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 9999999876 5 457899999999999999999999999999999999999999873 555 899999999
Q ss_pred HHhhhhhHhhcCCCCCCCCchhhhHHHHHhccCCCcccchhhHHhhhhhhhHHHhHHHHHHcCCCccCCCccchhHHH
Q 013583 356 FEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIE 433 (440)
Q Consensus 356 e~~~~~~~~~~~~~~~l~pNvD~~~a~l~~~lGlp~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~~i~RP~~~~~~~~~ 433 (440)
|+++.+ +++.|+++||||||+|+++++||||. ++||++|++||++||+||++||++++ +|+||++.|+|.-.
T Consensus 293 e~~~~~----~~~~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~~~ 364 (373)
T 1vgp_A 293 EEIGIK----YLGPKGIYPNVDFFSSIVFYSLGFEP-DFFPAVFASARVVGWVAHIMEYIKDN-KIIRPKAYYKGEIG 364 (373)
T ss_dssp HHHHHH----HHGGGTCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHGGGC-CCCCCCCCCCSCCC
T ss_pred HHHHHH----hcccCCCCCChHHHHHHHHHHcCCCH-HhhhhhHHhhccccHHHHHHHHHhcC-CCcCccccccCCCC
Confidence 999754 34568999999999999999999995 99999999999999999999999988 68999999999643
No 18
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=49.20 E-value=44 Score=33.46 Aligned_cols=62 Identities=16% Similarity=0.156 Sum_probs=47.9
Q ss_pred CcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcC--CCHH--HHHHHHcCCCCCChHHHHHHHHHHhcc
Q 013583 90 PLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPDY--VYKAIDALPVTAHPMTQFASGVMALQV 153 (440)
Q Consensus 90 ~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~~--lp~~--v~~~i~~lP~~~hPM~~L~~~vs~L~~ 153 (440)
-+|-|.+|++++|+.|++.+.+.|..-|.-+.. +... ...+..+ ..++|-..+.+++++|..
T Consensus 153 ls~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe~n~St~tarvvaS--t~ad~ysavaagi~aL~G 218 (375)
T 3tqg_A 153 LTLAGYFLHLLLGKKAAQMAIDCMNASLILYAEHEFNASTFAARVCSA--TLSDIYSAVTAAIATLRG 218 (375)
T ss_dssp SSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHTS
T ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHc--cCCCHHHHHHHHHHhccC
Confidence 468899999999999999999999998866642 4443 4445544 457899999999999843
No 19
>3u5c_P 40S ribosomal protein S15; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_R 3o30_I 3o2z_I 3u5g_P 1s1h_S 3jyv_S*
Probab=43.20 E-value=9.4 Score=33.14 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=18.4
Q ss_pred eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHH
Q 013583 67 IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 98 (440)
Q Consensus 67 i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~L 98 (440)
..|||++++||.+. +.||++=|
T Consensus 15 FtyrG~~ld~Ll~m----------s~e~l~~L 36 (142)
T 3u5c_P 15 HSYRGVDLEKLLEM----------STEDFVKL 36 (142)
T ss_dssp CBSSSCBHHHHHTT----------CHHHHHHH
T ss_pred EEEccccHHHHHcC----------CHHHHHHH
Confidence 48999999999987 37887766
No 20
>3j20_T 30S ribosomal protein S19P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=43.08 E-value=9.1 Score=32.83 Aligned_cols=22 Identities=27% Similarity=0.490 Sum_probs=18.4
Q ss_pred eeecCCCHHHHhhhCCCCCCCCCCcHHHHHHH
Q 013583 67 IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 98 (440)
Q Consensus 67 i~YRGy~I~eL~~~~~~~~~~~~~~~Eev~~L 98 (440)
..|||++++||.+. +.||++=|
T Consensus 6 ftyrG~~ld~L~~m----------s~~~l~~L 27 (132)
T 3j20_T 6 FRYRGYTLEQLMNM----------SLEELARL 27 (132)
T ss_dssp CCSSSSCHHHHHHH----------HHHHHHHH
T ss_pred EEEcCCcHHHHHcC----------CHHHHHHH
Confidence 47999999999998 37887766
No 21
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=38.99 E-value=77 Score=31.65 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=45.8
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHHHH--HHHHcCCCCCChHHHHHHHHHHh
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVY--KAIDALPVTAHPMTQFASGVMAL 151 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~v~--~~i~~lP~~~hPM~~L~~~vs~L 151 (440)
+|-|.++++++|+.|++.+.+.|..-|.-+. .+...+. .++.+ ..++|-..+.+++++|
T Consensus 154 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aS--t~~d~~savaagi~aL 216 (378)
T 1a59_A 154 DYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHSFNASTFTARVITS--TLADLHSAVTGAIGAL 216 (378)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCCCCchHHHHHHHhh--cCCcHHHHHHHHHHHc
Confidence 5789999999999999999999998886664 2444333 34443 4589999999999999
No 22
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=38.49 E-value=80 Score=31.48 Aligned_cols=62 Identities=16% Similarity=0.165 Sum_probs=46.0
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHHHHHHHHcCCCCCChHHHHHHHHHHhc
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
+|-|.++++++|+.|++.+.+.|..-|.-+. .+...+....-.-...++|-..+.+++++|.
T Consensus 151 s~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aSt~~d~~savaagi~aL~ 214 (371)
T 1aj8_A 151 SHAANFLYMLHGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALK 214 (371)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCCCChhHHHHHHHhhcCCcHHHHHHHHHHHcC
Confidence 5779999999999999999999998886664 2444333322222345789999999999983
No 23
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=37.82 E-value=82 Score=31.44 Aligned_cols=62 Identities=19% Similarity=0.213 Sum_probs=46.0
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHHHHHHHHcCCCCCChHHHHHHHHHHhc
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
+|-|.++++++|+.|++.+.+.|..-|.-+. .+...+..+--.-...++|-..+.+++++|.
T Consensus 152 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~~d~~savaagi~aL~ 215 (377)
T 1iom_A 152 SHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLK 215 (377)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCchHHHHHHHhhcCCcHHHHHHHHHHHcc
Confidence 5779999999999999999999998886664 2444333322222345889999999999983
No 24
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=37.51 E-value=83 Score=31.78 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=46.9
Q ss_pred CcHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCH--HHHHHHHcCCCCCChHHHHHHHHHHhc
Q 013583 90 PLPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPD--YVYKAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 90 ~~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~--~v~~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
-++-|.+|.+++|+.|++.+.+.|..-|.-+. .+.. ....+..+ ..++|-..+.+++++|.
T Consensus 182 ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe~N~St~taRvvaS--t~ad~ysavaagi~aL~ 246 (404)
T 3o8j_A 182 DSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHEFNASTFTSRVIAG--TGSDVYSAIIGAIGALR 246 (404)
T ss_dssp SSHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSSSHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCCCChHHHHHHHHHh--cCCCHHHHHHHHHHHcc
Confidence 36889999999999999999999999887664 2343 34445544 34789999999999984
No 25
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=37.42 E-value=84 Score=31.49 Aligned_cols=62 Identities=16% Similarity=0.183 Sum_probs=46.2
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHHHHHHHHcCCCCCChHHHHHHHHHHhc
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
+|-|.++++++|+.|++.+.+.|..-|.-+. .+...+....-.-...++|-..+.+++++|.
T Consensus 156 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aSt~~d~~savaagi~aL~ 219 (385)
T 2ifc_A 156 SYAESFLNAAFGRKATKEEIDAMNTALILYTDHEVPASTTAGLVAVSTLSDMYSGITAALAALK 219 (385)
T ss_dssp CHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCCccHHHHHHHHHHhcCCcHHHHHHHHHHHcc
Confidence 5789999999999999999999999886664 2444433322222345689999999999983
No 26
>2xzm_S RPS15E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_S 3j0o_S 3j0l_S 3j0p_S 3j0q_S
Probab=36.89 E-value=12 Score=32.57 Aligned_cols=13 Identities=31% Similarity=0.549 Sum_probs=12.1
Q ss_pred eeecCCCHHHHhh
Q 013583 67 IRFRGLSIPECQK 79 (440)
Q Consensus 67 i~YRGy~I~eL~~ 79 (440)
..|||++++||.+
T Consensus 11 ftyrG~~l~~L~~ 23 (144)
T 2xzm_S 11 FTFRGKGLEELTA 23 (144)
T ss_dssp CCCCTTCHHHHHH
T ss_pred eeecCCcHHHHHh
Confidence 4899999999999
No 27
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=36.42 E-value=88 Score=31.61 Aligned_cols=62 Identities=18% Similarity=0.200 Sum_probs=46.0
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHHHHHHHHcCCCCCChHHHHHHHHHHhc
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
+|-|.++++++|+.|++.+.+.|..-|.-+. .+...+..+--.-...++|-..+.+++++|.
T Consensus 182 s~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg~naST~aaRv~aSt~ad~~savaagi~aL~ 245 (409)
T 2ibp_A 182 GHAANFLYMMFGREPDPLASRGIDLYLILHADHEVPASTFAAHVVASTLSDLYSSVAAAIAALK 245 (409)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCCCChhHHHHHHHhhcCCcHHHHHHHHHHHcc
Confidence 5789999999999999999999999886664 2444333322222345789999999999983
No 28
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=35.84 E-value=89 Score=31.14 Aligned_cols=62 Identities=11% Similarity=0.175 Sum_probs=46.0
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHHHHHHHHcCCCCCChHHHHHHHHHHhc
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
+|-|.++++++|+.|++.+.+.|..-|.-+. .+...+..+--.-...++|-..+.+++++|.
T Consensus 148 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~ST~aaRv~aSt~ad~~savaagi~aL~ 211 (373)
T 1vgp_A 148 SHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHEMNASTFASLVVASTFSDLYSSIVAGISALK 211 (373)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHhcCccHHHHHHHHHHhcC
Confidence 5779999999999999999999999886654 2344333322222345789999999999993
No 29
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=35.65 E-value=94 Score=31.03 Aligned_cols=62 Identities=18% Similarity=0.178 Sum_probs=46.1
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHHHHHHHHcCCCCCChHHHHHHHHHHhc
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
+|-|.++++++|+.|++.+.+.|..-|.-+. .+...+...--.-...++|-..+.+++++|.
T Consensus 152 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~~d~~savaagi~aL~ 215 (378)
T 1vgm_A 152 SYAESFLAATFGKKPTQEEIKAMDASLILYTDHEVPASTTAALVASSTLSDMYSCIVAALAALK 215 (378)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCcHHHHHHHHHHhcc
Confidence 5789999999999999999999999886664 2444433322222345689999999999984
No 30
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=33.50 E-value=1e+02 Score=31.18 Aligned_cols=60 Identities=12% Similarity=0.112 Sum_probs=46.1
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHH--HHHHHHcCCCCCChHHHHHHHHHHhc
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDY--VYKAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~--v~~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
++-|.++.+++|+.|++.+.+.|..-|.-+. .+... ...+..+ ..++|-..+.+++++|.
T Consensus 196 s~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe~NaST~taRvvaS--t~ad~ysavaagi~aL~ 259 (414)
T 3hwk_A 196 GYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTS--TQSDIYSAVTGAIGALK 259 (414)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCCCChHHHHHHHHHh--cCCCHHHHHHHHHHHhc
Confidence 5889999999999999999999999886654 24433 3344444 45789999999999984
No 31
>3iz6_R 40S ribosomal protein S15 (S19P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 2zkq_s
Probab=29.95 E-value=11 Score=33.10 Aligned_cols=15 Identities=13% Similarity=0.401 Sum_probs=0.0
Q ss_pred eeecCCCHHHHhhhC
Q 013583 67 IRFRGLSIPECQKLL 81 (440)
Q Consensus 67 i~YRGy~I~eL~~~~ 81 (440)
..|||++++||.+.+
T Consensus 24 FtYrG~~ld~Ll~ms 38 (154)
T 3iz6_R 24 YSYRGVDLDALLDMS 38 (154)
T ss_dssp ---------------
T ss_pred EEEecCcHHHHHhCC
Confidence 389999999999873
No 32
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=28.37 E-value=1.2e+02 Score=30.18 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=45.1
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHHHHHHHHcCCCCCChHHHHHHHHHHhc
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
+|-|.++++++|+.|++.+.+.|..-|.-+. .+...+...--.-...++|-..+.+++++|.
T Consensus 145 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aSt~~d~~savaagi~aL~ 208 (363)
T 2c6x_A 145 GHVENYYYMLTGEQPSEAKKKALETYMILATEHGMNASTFSARVTLSTESDLVSAVTAALGTMK 208 (363)
T ss_dssp CSHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHHhcCccHHHHHHHHHHHcc
Confidence 4679999999999999999999998875543 3444433322222345789999999999983
No 33
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=26.39 E-value=69 Score=31.04 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=36.8
Q ss_pred ChhhHHHHHHHHHhCCCcccccCCCCCCCCCc-cHHHHHHHHHhh
Q 013583 299 TTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDP-RYTCQREFALKH 342 (440)
Q Consensus 299 ~~~~~~~~v~~~l~~~~~ipGfGH~vy~~~DP-Ra~~L~~~a~~~ 342 (440)
+++.+++.+.+.++.++-|.+-||-+....+| ..+.+.+.++++
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHh
Confidence 57889999999999999999999999988787 577777777764
No 34
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=23.45 E-value=1.7e+02 Score=29.18 Aligned_cols=60 Identities=13% Similarity=0.177 Sum_probs=45.4
Q ss_pred cHHHHHHHHHhCCCCCHHHHHHHHHHHHhhc--CCCHHHH--HHHHcCCCCCChHHHHHHHHHHhc
Q 013583 91 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVY--KAIDALPVTAHPMTQFASGVMALQ 152 (440)
Q Consensus 91 ~~Eev~~LLl~G~LPt~~el~~f~~~L~~~~--~lp~~v~--~~i~~lP~~~hPM~~L~~~vs~L~ 152 (440)
++-|.+..+++|+-|++.+.+.|..-|.-+. .+...+. .++.+ ..++|-..+.+++++|.
T Consensus 151 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aS--t~ad~~savaagi~aL~ 214 (377)
T 1o7x_A 151 SFAKSFLLASFAREPTTDEINAMDKALILYTDHEVPASTTAALVAAS--TLSDMYSSLTAALAALK 214 (377)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHH--TTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCChHHHHHHHHHh--cCCcHHHHHHHHHHhcC
Confidence 5779999999999999999999998886654 2444333 34443 34689999999999984
Done!