Query 013584
Match_columns 440
No_of_seqs 251 out of 1574
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 13:19:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013584.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013584hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.8 6.2E-18 2.1E-22 172.6 25.7 241 161-408 7-253 (445)
2 3gia_A Uncharacterized protein 99.7 3.8E-16 1.3E-20 159.4 20.4 237 161-406 5-248 (444)
3 4djk_A Probable glutamate/gamm 99.6 1.3E-13 4.3E-18 143.2 23.7 237 161-407 10-262 (511)
4 2jln_A MHP1; hydantoin, transp 98.7 3.9E-06 1.3E-10 86.7 23.9 246 161-416 24-289 (501)
5 3dh4_A Sodium/glucose cotransp 97.9 0.0015 5.2E-08 67.7 23.3 151 161-323 19-171 (530)
6 2xq2_A Sodium/glucose cotransp 97.6 0.0043 1.5E-07 65.2 20.5 151 161-323 48-200 (593)
7 2a65_A Leutaa, Na(+):neurotran 97.4 0.073 2.5E-06 54.6 25.8 245 163-408 8-309 (519)
8 4ain_A Glycine betaine transpo 87.7 4.1 0.00014 41.6 11.8 91 348-438 321-428 (539)
9 2wsw_A BCCT family betaine/car 81.0 50 0.0017 33.4 21.1 269 161-437 88-426 (509)
10 3l1l_A Arginine/agmatine antip 50.3 1.8E+02 0.0061 27.9 19.6 46 225-270 260-305 (445)
11 4aco_A Centromere DNA-binding 47.6 3.9 0.00013 43.4 0.0 12 7-18 674-685 (956)
12 3gia_A Uncharacterized protein 29.0 3.8E+02 0.013 25.5 17.6 44 226-269 259-302 (444)
13 4hkr_A Calcium release-activat 27.4 1.8E+02 0.0061 25.5 7.1 41 203-245 33-73 (214)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.80 E-value=6.2e-18 Score=172.60 Aligned_cols=241 Identities=10% Similarity=0.102 Sum_probs=177.3
Q ss_pred CCCCCHHHHHHHHHHhhhccccchhHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHhhhhHh
Q 013584 161 SRQSSYAQALLNGMNVLCGVGILSTPYAAKEGGWFGLLILVAFGVLSFYTGILLRRCLDSEPGLETYPDIGQAAFGTAGR 240 (440)
Q Consensus 161 ~~~~s~~~~~~~ii~~iIG~GiLslP~a~~~~G~~g~illi~~g~l~~~t~~lL~~~~~~~~~~~sy~~i~~~~fG~~~~ 240 (440)
+|+++.+++++..++++||+|++.+|..+.++|..+++.+++.++++...+..+.+...+.|....+..+.++.+|++.+
T Consensus 7 ~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G~~~g 86 (445)
T 3l1l_A 7 AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLG 86 (445)
T ss_dssp CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSCHHHH
T ss_pred CCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcCChHH
Confidence 68899999999999999999999999988888987788888888888888999999988888877888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhhhccccccCcCccccchhHHHHHHHHHHHHhhhhcccchhHHHHHHHHHHHHH
Q 013584 241 IAVSVILYAELYACCIEYIILESDNLSSLFPNAHLSFGGFYLNSHHLFALMTTLAVLPTCWLRDLTVLSYISAGGVIASI 320 (440)
Q Consensus 241 ~l~~~~~~~~~~~~~v~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~liv~pl~~~r~l~~l~~~s~~~~i~~i 320 (440)
+++.|.+++........+....++++..+++....+ + ....+.++..+++.. ...+..+...++..+.++..+
T Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~-in~~g~~~~~~~~~~~~~~~i 159 (445)
T 3l1l_A 87 YQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDP---W---VLTITCVVVLWIFVL-LNIVGPKMITRVQAVATVLAL 159 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGSH---H---HHHHHHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccccc---H---HHHHHHHHHHHHHHH-HHHhchHHHHHHHHHHHHHHH
Confidence 999999999887777888888888888877653211 0 011222222222222 223356666666655555444
Q ss_pred HHHHHhhhhhcccc-c-CCCCCCC---CCCCCchHHHHHHHHHHhhcccchHHHHhhccCCCC-hhhHHHHHHHHHHHHH
Q 013584 321 LVVLCLFWVGLVDQ-V-NIHSKGT---PLNLATLPVAIGLYGYCYSGHAVFPNIYTSMAQPNQ-FPKVLITCFLICTAMY 394 (440)
Q Consensus 321 ~~ii~ii~~~~~~~-~-~~~~~~~---~~~~~~~~~a~~~~~faf~g~~~i~~i~~emk~p~k-~~~ai~~a~~i~~~lY 394 (440)
+.++.+++.++... . .+..... ..++.++..++...+|+|.|++.+..+.+|+|||+| +||++..++.+++++|
T Consensus 160 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~~y 239 (445)
T 3l1l_A 160 IPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCY 239 (445)
T ss_dssp HHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHHHHHH
Confidence 44444444443221 1 1111111 123567889999999999999999999999999987 9999999999999999
Q ss_pred HHHHHHHHHHhcCC
Q 013584 395 AGVAYMGYTMFGES 408 (440)
Q Consensus 395 ~~v~~~gy~~fG~~ 408 (440)
+++.++.....+.+
T Consensus 240 ~~~~~~~~~~~~~~ 253 (445)
T 3l1l_A 240 VLSTTAIMGMIPNA 253 (445)
T ss_dssp HHHHHHHHHHSCTT
T ss_pred HHHHHHHHhcCCHH
Confidence 99999888877643
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.71 E-value=3.8e-16 Score=159.38 Aligned_cols=237 Identities=15% Similarity=0.132 Sum_probs=169.7
Q ss_pred CCCCCHHHHHHHHHHhhhccccchhHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHhhhhH
Q 013584 161 SRQSSYAQALLNGMNVLCGVGILSTPY-AAKEGGWFGLLILVAFGVLSFYTGILLRRCLDSEPGLETYPDIGQAAFGTAG 239 (440)
Q Consensus 161 ~~~~s~~~~~~~ii~~iIG~GiLslP~-a~~~~G~~g~illi~~g~l~~~t~~lL~~~~~~~~~~~sy~~i~~~~fG~~~ 239 (440)
+|+++.++.++..++.++|+|++.+|. +...+|...++.+++.++++..++..+.|...+.|.......+.++.+|++.
T Consensus 5 ~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~~~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G~~~ 84 (444)
T 3gia_A 5 NKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNI 84 (444)
T ss_dssp CCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHCSSH
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhCcch
Confidence 688999999999999999999998875 4677787677777888888888999999999888887788899999999963
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHhhHhhhccccccCcCccccchhHHHHHHHHHHHHhhh--hcccchhHHHHHHHHH
Q 013584 240 -RIAVSVILYAELYACCIEYIILESDNLSSLFPNAHLSFGGFYLNSHHLFALMTTLAVLPTC--WLRDLTVLSYISAGGV 316 (440)
Q Consensus 240 -~~l~~~~~~~~~~~~~v~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~liv~pl~--~~r~l~~l~~~s~~~~ 316 (440)
...+.+.+++.....+..+....++++..+++.... .....++..++++.+. ..+..+...++..+..
T Consensus 85 ~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~ 155 (444)
T 3gia_A 85 ITGALSILLWMSYVISIALFAKGFAGYFLPLINAPIN---------TFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIV 155 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC---------HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc---------hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 334467777777777778888888988888754321 1111122222222222 2335565666655554
Q ss_pred HHHHHHHHHhhhhhccc--ccCCCCCCCCCCCCchHHHHHHHHHHhhcccchHHHHhhccCCCC-hhhHHHHHHHHHHHH
Q 013584 317 IASILVVLCLFWVGLVD--QVNIHSKGTPLNLATLPVAIGLYGYCYSGHAVFPNIYTSMAQPNQ-FPKVLITCFLICTAM 393 (440)
Q Consensus 317 i~~i~~ii~ii~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~~faf~g~~~i~~i~~emk~p~k-~~~ai~~a~~i~~~l 393 (440)
+..++.++.+++.++.. ..++.+...+.++.++..++...+|+|.|++.+..+.+|+|||+| +||++..++.+++++
T Consensus 156 ~~~i~~~~~~ii~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~~~ 235 (444)
T 3gia_A 156 LVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFV 235 (444)
T ss_dssp HHHHHHHHHHHHHHHHHCCGGGTSCCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcChhhcCCCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHHHHHHHH
Confidence 44444443333333321 112222222334456788888899999999999999999999988 999999999999999
Q ss_pred HHHHHHHHHHHhc
Q 013584 394 YAGVAYMGYTMFG 406 (440)
Q Consensus 394 Y~~v~~~gy~~fG 406 (440)
|+++.++.....+
T Consensus 236 y~~~~~~~~~~~~ 248 (444)
T 3gia_A 236 YVGVAISAIGNLP 248 (444)
T ss_dssp HHHHHHHHHTTSC
T ss_pred HHHHHHHHHhCCC
Confidence 9999887766654
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.59 E-value=1.3e-13 Score=143.17 Aligned_cols=237 Identities=14% Similarity=0.124 Sum_probs=150.9
Q ss_pred CCCCCHHHHHHHHHHhhhccccchhHHHHHhhCHHHHHHHHHHHHHHH-HHHHHHHHhhh--cCCCCCCHHHHHHHHhhh
Q 013584 161 SRQSSYAQALLNGMNVLCGVGILSTPYAAKEGGWFGLLILVAFGVLSF-YTGILLRRCLD--SEPGLETYPDIGQAAFGT 237 (440)
Q Consensus 161 ~~~~s~~~~~~~ii~~iIG~GiLslP~a~~~~G~~g~illi~~g~l~~-~t~~lL~~~~~--~~~~~~sy~~i~~~~fG~ 237 (440)
+|+.+.++.++..++.++| ++.+|. ...+|...++..++.+++.. .++..+.|... +.| ......+.++.+|+
T Consensus 10 ~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~~~~~~~i~~~~~~l~~al~~ael~s~~~~P-~GG~y~~~~~~~g~ 85 (511)
T 4djk_A 10 AKQLTLLGFFAITASMVMA--VYEYPT-FATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWE-EGGVFAWVSNTLGP 85 (511)
T ss_dssp --CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC----CHHHHHHHHHCH
T ss_pred CccccHHHHHHHHHHHHHh--hchhHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCC-CCChhhhHHhhcCc
Confidence 7889999999999999996 557775 46777755555444444443 36778888887 788 77888999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhhHhhhc--cccccCcCccccchhHHHHHHHHHHHHhhhhcccchhHHHHHHHH
Q 013584 238 AGRIAVSVILYAELYACCIEYIILESDNLSSLF--PNAHLSFGGFYLNSHHLFALMTTLAVLPTCWLRDLTVLSYISAGG 315 (440)
Q Consensus 238 ~~~~l~~~~~~~~~~~~~v~y~i~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~ii~~liv~pl~~~r~l~~l~~~s~~~ 315 (440)
+.+++..|.+++........+....+..+..++ +..... .|. ...+.++..+++..+ ..+..+...++..+.
T Consensus 86 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~---~~~~~~~~~~~~~~i-n~~g~~~~~~~~~~~ 159 (511)
T 4djk_A 86 RWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNED--PIT---KTIAALIILWALALT-QFGGTKYTARIAKVG 159 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTCGGGTSC--SSH---HHHHHHHHHHHHHHH-HHTCSSSHHHHTHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC--cHH---HHHHHHHHHHHHHHH-HHhChHHHHHHHHHH
Confidence 999999999999877777777777777776663 332211 110 112222222222222 234666666666554
Q ss_pred HHH-HHHHHHHhhhhhcc----ccc-C--CCCCC--CCCCCCchHHHHHHHHHHhhcccchHHHHhhccCCCC-hhhHHH
Q 013584 316 VIA-SILVVLCLFWVGLV----DQV-N--IHSKG--TPLNLATLPVAIGLYGYCYSGHAVFPNIYTSMAQPNQ-FPKVLI 384 (440)
Q Consensus 316 ~i~-~i~~ii~ii~~~~~----~~~-~--~~~~~--~~~~~~~~~~a~~~~~faf~g~~~i~~i~~emk~p~k-~~~ai~ 384 (440)
.+. .++.++.++..++. .+. . .+... +.....+...++...+|+|.|++.+..+.+|+|||+| +||++.
T Consensus 160 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai~ 239 (511)
T 4djk_A 160 FFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAML 239 (511)
T ss_dssp HHHTTHHHHHHHHHHHHHHTC------------CCCCCTTSTTTTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCcccchHHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHHHH
Confidence 332 11112222222211 110 0 01111 1111123445677889999999999999999999988 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Q 013584 385 TCFLICTAMYAGVAYMGYTMFGE 407 (440)
Q Consensus 385 ~a~~i~~~lY~~v~~~gy~~fG~ 407 (440)
.++.+++++|+++.++.....++
T Consensus 240 ~~~~~~~~~y~~~~~~~~~~~~~ 262 (511)
T 4djk_A 240 LLMVAAICLSSVGGLSIAMVIPG 262 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHeecCH
Confidence 99999999999999987776664
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.66 E-value=3.9e-06 Score=86.74 Aligned_cols=246 Identities=10% Similarity=0.056 Sum_probs=146.8
Q ss_pred CCCCCHHHHHHHHHHhhhccccchhHHHHHhhCH--H-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHhhh
Q 013584 161 SRQSSYAQALLNGMNVLCGVGILSTPYAAKEGGW--F-GLLILVAFGVLSFYTGILLRRCLDSEPGLETYPDIGQAAFGT 237 (440)
Q Consensus 161 ~~~~s~~~~~~~ii~~iIG~GiLslP~a~~~~G~--~-g~illi~~g~l~~~t~~lL~~~~~~~~~~~sy~~i~~~~fG~ 237 (440)
+|+.++++.+..-++..++.+-+.+...+.. |. . .++.+++..++......++.....+. +. ++..+.+..||+
T Consensus 24 ~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~-GLs~~~a~lai~lG~li~~~~~~l~~~~G~~~-Gl-~~~v~~R~~FG~ 100 (501)
T 2jln_A 24 ERSVGPFSLAAIWFAMAIQVAIFIAAGQMTS-SFQVWQVIVAIAAGCTIAVILLFFTQSAAIRW-GI-NFTVAARMPFGI 100 (501)
T ss_dssp GCCBCHHHHHHHHHHHHCSTHHHHHHHHHTT-TSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-CC-CHHHHTTTTSCT
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc-CcCHHHHHHHHHHHHHHHHHHHHHHhHHHhhc-CC-ChhhhhHhhcch
Confidence 5668999999999998888888877766554 53 3 55554555555554455555554333 32 599999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHhhHhhhccccccCcCccccchhHHHHHHHHHHHHhhhhcccchhHHHHHHHHHH
Q 013584 238 AGRIAVSVILYAELYACCIEYIILESDNLSSLFPNAHLSFGGFYLNSHHLFALMTTLAVLPTCWLRDLTVLSYISAGGVI 317 (440)
Q Consensus 238 ~~~~l~~~~~~~~~~~~~v~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~liv~pl~~~r~l~~l~~~s~~~~i 317 (440)
++..+..++..+.+++.........++.+..++.... .. ....+..++..++.+++.+. ..+.+.++..+..+
T Consensus 101 ~Gs~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~-g~-----~~~~v~~~i~~~l~~~~~~~-G~~~i~~~~~~~~p 173 (501)
T 2jln_A 101 RGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLT-GF-----TNLPLWIVIFGAIQVVTTFY-GITFIRWMNVFASP 173 (501)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CC-----CCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cc-----chHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 9999999999998888888888888888877653211 00 01234445556666666644 77777777776665
Q ss_pred HHHHHHHHhhhhhccc-cc--C-CCCCCCCCCCCchHHHHHH-HHHHhhcccchHHHHhhccCCCC------------hh
Q 013584 318 ASILVVLCLFWVGLVD-QV--N-IHSKGTPLNLATLPVAIGL-YGYCYSGHAVFPNIYTSMAQPNQ------------FP 380 (440)
Q Consensus 318 ~~i~~ii~ii~~~~~~-~~--~-~~~~~~~~~~~~~~~a~~~-~~faf~g~~~i~~i~~emk~p~k------------~~ 380 (440)
..++.++.+.+..+.. +. + ............+..++.. +.+.-.+..+.+.+.+.+|++++ ..
T Consensus 174 ~~~i~~i~~~~~~l~~~g~~~~~~~~~~~~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~~~~~~~~~~~~~~~~~~~~ 253 (501)
T 2jln_A 174 VLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYA 253 (501)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCCCSSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTBCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcchhhhccCCccchHHHHHHHHHHHHHHHHHHhccCcccccCCCCccccccchhhccchHH
Confidence 5544444333322211 11 0 0011111223345555543 23322344778999999998877 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhcC
Q 013584 381 KVLITCFLICTAMYAGVAYMGYTMFGESTLSQFTLN 416 (440)
Q Consensus 381 ~ai~~a~~i~~~lY~~v~~~gy~~fG~~~~~~il~n 416 (440)
....++..+..++..++|++.....+......++..
T Consensus 254 ~g~~lG~~i~~~~~~~lG~~~~~~~~~~dp~~~l~~ 289 (501)
T 2jln_A 254 TAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITE 289 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHH
Confidence 344455555555555666554444444333334433
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=97.93 E-value=0.0015 Score=67.73 Aligned_cols=151 Identities=11% Similarity=0.032 Sum_probs=89.5
Q ss_pred CCCCCHHHHHHHHHHhhhccc-cchhHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHhhhhH
Q 013584 161 SRQSSYAQALLNGMNVLCGVG-ILSTPYAAKEGGWFGLLILVAFGVLSFYTGILLRRCLDSEPGLETYPDIGQAAFGTAG 239 (440)
Q Consensus 161 ~~~~s~~~~~~~ii~~iIG~G-iLslP~a~~~~G~~g~illi~~g~l~~~t~~lL~~~~~~~~~~~sy~~i~~~~fG~~~ 239 (440)
.|+.+++...+.++.+.+++. ++++|......|+.+.......++.....+..+.... ++.+..|++|+.++-||++.
T Consensus 19 GR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~~~~~~~i~~~~~~p~~-~~~~~~T~~e~l~~Rfg~~~ 97 (530)
T 3dh4_A 19 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIF-IEKGIYTIPEFVEKRFNKKL 97 (530)
T ss_dssp CSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHHHHHHHHHHHHHTHHHH-HHTTCCSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCccHHHHHHHHcCcHH
Confidence 688999999999999999987 6789988777786422111111111112233333333 34567899999999999999
Q ss_pred hHHHHHHHHH-HHHHHHHHHHHHHHhhHhhhccccccCcCccccchhHHHHHHHHHHHHhhhhcccchhHHHHHHHHHHH
Q 013584 240 RIAVSVILYA-ELYACCIEYIILESDNLSSLFPNAHLSFGGFYLNSHHLFALMTTLAVLPTCWLRDLTVLSYISAGGVIA 318 (440)
Q Consensus 240 ~~l~~~~~~~-~~~~~~v~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~liv~pl~~~r~l~~l~~~s~~~~i~ 318 (440)
+.+..+...+ ..+..+.+.+...+..++.++. .+ .....++.+++++..+.+..++...|.-.+..+.
T Consensus 98 ~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~G-i~----------~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~iQ~~i 166 (530)
T 3dh4_A 98 KTILAVFWISLYIFVNLTSVLYLGGLALETILG-IP----------LMYSILGLALFALVYSIYGGLSAVVWTDVIQVFF 166 (530)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CC----------HHHHHHHHHHHHHHTTC------CCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CC----------HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 8877765543 2222233334444555555552 11 1344455555666667777888888888877766
Q ss_pred HHHHH
Q 013584 319 SILVV 323 (440)
Q Consensus 319 ~i~~i 323 (440)
+++.+
T Consensus 167 m~~g~ 171 (530)
T 3dh4_A 167 LVLGG 171 (530)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55433
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.59 E-value=0.0043 Score=65.18 Aligned_cols=151 Identities=11% Similarity=0.032 Sum_probs=86.1
Q ss_pred CCCCCHHHHHHHHHHhhhccc-cchhHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHhhhhH
Q 013584 161 SRQSSYAQALLNGMNVLCGVG-ILSTPYAAKEGGWFGLLILVAFGVLSFYTGILLRRCLDSEPGLETYPDIGQAAFGTAG 239 (440)
Q Consensus 161 ~~~~s~~~~~~~ii~~iIG~G-iLslP~a~~~~G~~g~illi~~g~l~~~t~~lL~~~~~~~~~~~sy~~i~~~~fG~~~ 239 (440)
.|+.+++...+.++.+.+++. +++.|....+.|+.+....+..++.....+..+..-. ++.+..|.+|+.++-||++.
T Consensus 48 GR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~~~~~~~~~~~~~~p~~-~r~~~~T~~e~l~~Rfg~~~ 126 (593)
T 2xq2_A 48 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIF-IEKGIYTIPEFVEKRFNKKL 126 (593)
T ss_dssp ---CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHHHHHHHHHHHHTHHHHH-HHTTCCSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCCcHHHHHHHccCch
Confidence 578999999999999989887 6788877667776421111111111112222233333 34567899999999999998
Q ss_pred hHHHHHHHHH-HHHHHHHHHHHHHHhhHhhhccccccCcCccccchhHHHHHHHHHHHHhhhhcccchhHHHHHHHHHHH
Q 013584 240 RIAVSVILYA-ELYACCIEYIILESDNLSSLFPNAHLSFGGFYLNSHHLFALMTTLAVLPTCWLRDLTVLSYISAGGVIA 318 (440)
Q Consensus 240 ~~l~~~~~~~-~~~~~~v~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~liv~pl~~~r~l~~l~~~s~~~~i~ 318 (440)
+.+..++..+ ..+......+...+..++.++. .+ .....++.+++++..+.+-.++...|.-.+..+.
T Consensus 127 ~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~G-i~----------~~~~i~i~~~i~~~Yt~~GGl~av~~TD~iQ~ii 195 (593)
T 2xq2_A 127 KTILAVFWISLYIFVNLTSVLYLGGLALETILG-IP----------LMYSILGLALFALVYSIYGGLSAVVWTDVIQVFF 195 (593)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CC----------HHHHHHHHHHHHHHHHHTTC---CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cc----------HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 8777665443 2333333334445556666553 11 1234445555556666677888888777777665
Q ss_pred HHHHH
Q 013584 319 SILVV 323 (440)
Q Consensus 319 ~i~~i 323 (440)
.++.+
T Consensus 196 ml~~~ 200 (593)
T 2xq2_A 196 LVLGG 200 (593)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54433
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=97.38 E-value=0.073 Score=54.65 Aligned_cols=245 Identities=13% Similarity=0.074 Sum_probs=121.2
Q ss_pred CCCHHHHHHHHHHhhhccc-cchhHHHH-HhhCHH----HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHhh
Q 013584 163 QSSYAQALLNGMNVLCGVG-ILSTPYAA-KEGGWF----GLLILVAFGVLSFYTGILLRRCLDSEPGLETYPDIGQAAFG 236 (440)
Q Consensus 163 ~~s~~~~~~~ii~~iIG~G-iLslP~a~-~~~G~~----g~illi~~g~l~~~t~~lL~~~~~~~~~~~sy~~i~~~~fG 236 (440)
=.|..+-++..++..+|-| +.=.||-. +++|-. =++.++++|+=..+.=..+++-..++.+ .+-....+++..
T Consensus 8 W~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~~~~r-~~~i~a~~~l~~ 86 (519)
T 2a65_A 8 WATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGH-GTTPAIFYLLWR 86 (519)
T ss_dssp CSCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTTC-CSHHHHHHHHSC
T ss_pred CCcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhccC-CCHHHHHHHhcC
Confidence 3578899999999999999 88899974 555522 2222233343334444555653311222 223333333322
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHHhhHhhhccccccC----cC-----c-------ccc----------------ch
Q 013584 237 TAGRIAVSVILYAELYACCIEYIILESDNLSSLFPNAHLS----FG-----G-------FYL----------------NS 284 (440)
Q Consensus 237 ~~~~~l~~~~~~~~~~~~~v~y~i~~~~~l~~~~~~~~~~----~~-----~-------~~~----------------~~ 284 (440)
++....+.+...+..+..++-|.++.+-.+.+++...... +. . ..+ ..
T Consensus 87 ~~~~~giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~g~~~~ 166 (519)
T 2a65_A 87 NRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATDPDSILRPFKEFLYSYIGVPKGDEPILKPSL 166 (519)
T ss_dssp SHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--CCHHHHHHHHHHHHHHHHTCCSSSSCBCCCCH
T ss_pred CcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcccccCcHHHHHHHHHCCCCCcccccCccH
Confidence 2111223333344444444455555554444433221111 00 0 000 01
Q ss_pred hHHHHHHHHHHHHhhhhcccc-hhHHHHHHHHHHHHHHHHHHhhhhhccccc---------C--CCCCCC-CCCCCchHH
Q 013584 285 HHLFALMTTLAVLPTCWLRDL-TVLSYISAGGVIASILVVLCLFWVGLVDQV---------N--IHSKGT-PLNLATLPV 351 (440)
Q Consensus 285 ~~~~~ii~~liv~pl~~~r~l-~~l~~~s~~~~i~~i~~ii~ii~~~~~~~~---------~--~~~~~~-~~~~~~~~~ 351 (440)
+.....+++.++.-++..|.+ +.+..++.+-..+.+++++++++.+..-+. . +.+... ..+..-+..
T Consensus 167 ~~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~Pd~s~L~~~~vw~~ 246 (519)
T 2a65_A 167 FAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIA 246 (519)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSCCTTSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcCCHHHhCCHHHHHH
Confidence 112222233333445556677 667777766555555555555555433211 0 111111 123345789
Q ss_pred HHHHHHHHhh-cccchHHHHhhccCCCChhhHHHHHHHHHHHH--H---HHHHHHHHHHhcCC
Q 013584 352 AIGLYGYCYS-GHAVFPNIYTSMAQPNQFPKVLITCFLICTAM--Y---AGVAYMGYTMFGES 408 (440)
Q Consensus 352 a~~~~~faf~-g~~~i~~i~~emk~p~k~~~ai~~a~~i~~~l--Y---~~v~~~gy~~fG~~ 408 (440)
|++.+.|+.+ |...+..+.+-+|+.++..|...+...+-+.. . ++++.+||.++|..
T Consensus 247 A~gQ~FFSLslG~G~~ity~SY~~~~~n~~~~a~~v~~~n~~~sllaG~~IF~~lgf~a~g~~ 309 (519)
T 2a65_A 247 AVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVA 309 (519)
T ss_dssp HHHHHHHHHTTTSSHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhHHHHhHHhhhhcccCCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999998 77888888888888888555333333222222 2 23333456555643
No 8
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=87.71 E-value=4.1 Score=41.59 Aligned_cols=91 Identities=11% Similarity=0.035 Sum_probs=50.9
Q ss_pred chHHHHHHHHHHhh--cccchHHHHhhccCCCChh----hHHHHHHHHHHHHHHHHHHHHHHH--hcCCc--h----h--
Q 013584 348 TLPVAIGLYGYCYS--GHAVFPNIYTSMAQPNQFP----KVLITCFLICTAMYAGVAYMGYTM--FGEST--L----S-- 411 (440)
Q Consensus 348 ~~~~a~~~~~faf~--g~~~i~~i~~emk~p~k~~----~ai~~a~~i~~~lY~~v~~~gy~~--fG~~~--~----~-- 411 (440)
++...-.++-+|+. --+.+.-....+.+-+.++ -++.+...++++-+.++|-.+... .|... . .
T Consensus 321 ~W~~~WTiFYWaWWiswaPfvG~FIARISrGRTIREfv~gvl~vPsl~~~~WfsvfGg~ai~~~~~g~~~~~~~~~~~al 400 (539)
T 4ain_A 321 EWLGSWTIFYWAWWISWSPFVGMFLARISRGRSIREFILGVLLVPAGVSTVWFSIFGGTAIVFEQNGESIWGDGAAEEQL 400 (539)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTCBHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTSCHHHHH
T ss_pred chhhcCHHHHHHHHHHHHHHHHHHhhhccCCcCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhccchhhcCCHhhHH
Confidence 56666677777664 1244444456666655443 344455555556666555544332 23210 0 1
Q ss_pred -hhhcCCCCchHHHHHHHHHHHHHhhcc
Q 013584 412 -QFTLNMPQDLVATKIAVWTTILRAVMS 438 (440)
Q Consensus 412 -~il~nlp~~~~~~~ia~~~~vi~~~t~ 438 (440)
.++.++|-..+...++.+++++...|.
T Consensus 401 f~~l~~lP~~~i~~~l~iili~~FfvTS 428 (539)
T 4ain_A 401 FGLLHALPGGQIMGIIAMILLGTFFITS 428 (539)
T ss_dssp HHHHHTSTTHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCchHHHHHHHHHHHHHHHHHHc
Confidence 367788877777777777777766653
No 9
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=80.97 E-value=50 Score=33.39 Aligned_cols=269 Identities=12% Similarity=0.051 Sum_probs=121.6
Q ss_pred CCCCCHHHHHHHHHHhhhccccchh----HHH-HH------hhCHH-----HHHHHH-----HHHHHHHHHHHHHHHhhh
Q 013584 161 SRQSSYAQALLNGMNVLCGVGILST----PYA-AK------EGGWF-----GLLILV-----AFGVLSFYTGILLRRCLD 219 (440)
Q Consensus 161 ~~~~s~~~~~~~ii~~iIG~GiLsl----P~a-~~------~~G~~-----g~illi-----~~g~l~~~t~~lL~~~~~ 219 (440)
+.+-|.++=+.+++.+-+|+|++-- |-. +. +.|.. +...-+ -...+-...+..++...-
T Consensus 88 kPefs~~sW~aMlF~aGmGiGl~fwgvaEP~~h~~~pP~~~~~~s~eAa~~Am~~tffHWG~~~WaiYal~~lalayf~y 167 (509)
T 2wsw_A 88 KPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISSPPFGMEGYSAPAKEIGLAYSLFHWGPLPWATYSFLSVAFAYFFF 167 (509)
T ss_dssp CCSSCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHSCSTTCCTTCHHHHHHHHHHHHHHTSHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCccchHHHHHHHHhhhhHHhhhhhhhhHHHccCCCCCCCCCcHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 4557888888899999999997642 432 22 11211 111111 111111222333444332
Q ss_pred -cCCCCCC-----HHHHH-HHHhhhhHhHHHHHHHHH-HHHHHHHHHHHHH---HhhHhhhccccccCcCccccchhHHH
Q 013584 220 -SEPGLET-----YPDIG-QAAFGTAGRIAVSVILYA-ELYACCIEYIILE---SDNLSSLFPNAHLSFGGFYLNSHHLF 288 (440)
Q Consensus 220 -~~~~~~s-----y~~i~-~~~fG~~~~~l~~~~~~~-~~~~~~v~y~i~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 288 (440)
|+....+ |+=++ +++.|+.++ +++++-.+ ..+|.+...-... +.-+..++. .+.. . ..+..
T Consensus 168 ~r~~~pl~iss~l~PllG~~r~~G~~G~-~IDilav~at~~G~atsLGlg~~qi~~Gl~~lfG-i~~~-----~-~~qi~ 239 (509)
T 2wsw_A 168 VRKMEVIRPSSTLVPLVGEKHVNGLFGT-VVDNFYLVALILAMGTSLGLATPLVTECIQYLFG-IPHT-----L-QLDAI 239 (509)
T ss_dssp TSCCCCCSGGGGCHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCC-----H-HHHHH
T ss_pred HcCCCCcchHHHhHhhcCCcccCCchhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCc-----c-HHHHH
Confidence 3323233 44445 455555444 55655444 4444444322222 223344432 1111 0 11222
Q ss_pred HHHHHHHHHhhhhcccc-hhHHHHHHHHHHHHHHHHHHhhhhhc--------cccc--------CCCCCCCCCCCCchHH
Q 013584 289 ALMTTLAVLPTCWLRDL-TVLSYISAGGVIASILVVLCLFWVGL--------VDQV--------NIHSKGTPLNLATLPV 351 (440)
Q Consensus 289 ~ii~~liv~pl~~~r~l-~~l~~~s~~~~i~~i~~ii~ii~~~~--------~~~~--------~~~~~~~~~~~~~~~~ 351 (440)
.++...++.-++....+ +.++++|.+-+...+.+++.+++.|- .+.. .......+.+-.++..
T Consensus 240 ii~vit~~~~~Sa~sGl~kGIk~LS~~N~~la~~Ll~fvli~GpT~fil~~~~~~~G~yl~nf~~ms~~~~~~~~~~w~~ 319 (509)
T 2wsw_A 240 IISCWILLNAICVAFGLQKGVKIASDVRTYLSFLMLGWVFIVGGASFIVNYFTDSVGTLLMYMPRMLFYTDPIGKGGFPQ 319 (509)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHTCCCTTTCCCHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCccChhh
Confidence 23233333344455566 77888887666655555544444331 1100 0001111111134677
Q ss_pred HHHHHHHHhh--cccchHHHHhhccCCCChhhHHHHHH----HHHHHHHHHHHHHHHH--HhcCCch-------------
Q 013584 352 AIGLYGYCYS--GHAVFPNIYTSMAQPNQFPKVLITCF----LICTAMYAGVAYMGYT--MFGESTL------------- 410 (440)
Q Consensus 352 a~~~~~faf~--g~~~i~~i~~emk~p~k~~~ai~~a~----~i~~~lY~~v~~~gy~--~fG~~~~------------- 410 (440)
.-.++-+++- --+.+.-....+.+-+.++-.+...+ ..+++-+.++|-.+.. ..|...-
T Consensus 320 ~WTiFYWaWWisWaPfvG~FIARISrGRTIREfi~gvl~vPs~~~~~WfsvfGg~ai~~~~~g~~~l~~~~~~~~~~~al 399 (509)
T 2wsw_A 320 AWTVFYWAWWVIYAIQMSIFLARISKGRTVRELCLGMVSGLTAGTWLIWTILGGNTLQLIDQNILNIPQLIDQYGVPRAI 399 (509)
T ss_dssp HTHHHHHHHHHHTHHHHHHHHHHTTTTCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHhheecCCcCHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHhCCccHHHHHhccChhhHH
Confidence 7777777763 12344444566666554544443333 3333334444333321 1232110
Q ss_pred hhhhcCCCCchHHHHHHHHHHHHHhhc
Q 013584 411 SQFTLNMPQDLVATKIAVWTTILRAVM 437 (440)
Q Consensus 411 ~~il~nlp~~~~~~~ia~~~~vi~~~t 437 (440)
=.++.++|-..+...++..+.++...|
T Consensus 400 f~~l~~lP~~~i~~~l~iil~~~FfvT 426 (509)
T 2wsw_A 400 IETWAALPLSTATMWGFFILCFIATVT 426 (509)
T ss_dssp HHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCChHHHHHHHHHHHHHHHHHH
Confidence 114567887667777777776666554
No 10
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=50.30 E-value=1.8e+02 Score=27.93 Aligned_cols=46 Identities=15% Similarity=0.163 Sum_probs=37.9
Q ss_pred CCHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhhHhhhc
Q 013584 225 ETYPDIGQAAFGTAGRIAVSVILYAELYACCIEYIILESDNLSSLF 270 (440)
Q Consensus 225 ~sy~~i~~~~fG~~~~~l~~~~~~~~~~~~~v~y~i~~~~~l~~~~ 270 (440)
..+.++.+..+|+++..++.+...+..+++..+++...+..+..+-
T Consensus 260 ~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a 305 (445)
T 3l1l_A 260 SPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAA 305 (445)
T ss_dssp CTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999988888888888888877777665543
No 11
>4aco_A Centromere DNA-binding protein complex CBF3 subun; 1.89A {Saccharomyces cerevisiae}
Probab=47.60 E-value=3.9 Score=43.38 Aligned_cols=12 Identities=17% Similarity=0.177 Sum_probs=0.0
Q ss_pred CcceeecCCchh
Q 013584 7 DHSFYIESDEEE 18 (440)
Q Consensus 7 ~~~~~~~~~~~~ 18 (440)
-+-+.|+++++|
T Consensus 674 ~~lldi~~~s~e 685 (956)
T 4aco_A 674 IRLLSIADSSDE 685 (956)
T ss_dssp ------------
T ss_pred CCcccccccccc
Confidence 344555544433
No 12
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=29.01 E-value=3.8e+02 Score=25.49 Aligned_cols=44 Identities=14% Similarity=0.077 Sum_probs=32.0
Q ss_pred CHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhhHhhh
Q 013584 226 TYPDIGQAAFGTAGRIAVSVILYAELYACCIEYIILESDNLSSL 269 (440)
Q Consensus 226 sy~~i~~~~fG~~~~~l~~~~~~~~~~~~~v~y~i~~~~~l~~~ 269 (440)
...++.+..+|+++..++.+...+..+++..+.+...+..+..+
T Consensus 259 ~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~ 302 (444)
T 3gia_A 259 ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSL 302 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHH
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888889888888888877777777777666655555443
No 13
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=27.42 E-value=1.8e+02 Score=25.48 Aligned_cols=41 Identities=17% Similarity=0.066 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHhhhhHhHHHHH
Q 013584 203 FGVLSFYTGILLRRCLDSEPGLETYPDIGQAAFGTAGRIAVSV 245 (440)
Q Consensus 203 ~g~l~~~t~~lL~~~~~~~~~~~sy~~i~~~~fG~~~~~l~~~ 245 (440)
.++++.+++..+++.-- ....+|++-.-.+||-....++.+
T Consensus 33 SALLaGFAMVAmVE~ql--~~~~~~p~~LLi~fav~Ttllv~v 73 (214)
T 4hkr_A 33 SALLSGFAMVAMVEVQL--DHDTNVPPGMLIAFAICTTLLVAV 73 (214)
T ss_dssp HHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHH
T ss_pred HHHHhccceeeEEEEec--cCCCCCChHHHHHHHHHHHHHHHH
Confidence 34455556666666532 222356555555555444444433
Done!