Citrus Sinensis ID: 013591

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
MTEVYQRMPSDQNDDSPAKCRERRRRRIKMRRFGAIVATSSEPTASDIRKEKRTEDSDRVAEGKRMRTEAETKDTPATETDVNSSPSSGEGTEKVVSLAATTEVQAVEPIFGTMSVTGRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVRCTSGNANAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCCERMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDERAEPLYPSRSVLAAALLTRLALGRRSSDNISVIVIDLKRNR
ccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccEEEEEccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEccEEEEEEccccEEEEEEccEEEEcccccccccHHHHHHHHHcccEEEEEccEEEccEEEEHHccccccccccccccccEEEEEccccccEEEEEccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccEEEEEEccccc
cccEEEEcccccccccHHHHHHHHHHHHHHcccHHHHHccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccHHHHHHHHccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEccEEEEEEcccccEEEEccccEEEcccccccccHHHHHHHHHcccEEEEEccccEcEEEHEEHHcccccccccEcccccEEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEccccc
mtevyqrmpsdqnddspakCRERRRRRIKMRRFGAivatsseptasdirkekrtedsdrvaegkrmrteaetkdtpatetdvnsspssgegtEKVVSLAATTEvqavepifgtmsvtgrsreMEDAISTrtslcspdinwrrpvhffavydghggrhvSSLCKEKMHVIMEEELMRVRCtsgnanagagpststreepqretentAEWEDRWRRAIRRCCERMDEVAVstcacgsvgcdcaahSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRagraiplscdhkpdrpdELARIEASGGRVIFVNGARVEGILAMSRAigdgylkpvvtsepditftkREAEDECLILAsdgmwdvlpnnlaCEVASeclreenpeaaadidlnagprmvederaeplypsRSVLAAALLTRLAlgrrssdnISVIVIDLKRNR
mtevyqrmpsdqnddspakcrerrrrrikmrrfgaivatsseptasdirkekrtedsdrvaegkrmrteaetkdtpatetdvnsspssgegTEKVVSLAattevqavepifgtmsvtgrsrEMEDAISTrtslcspdinwrRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVRCTSgnanagagpststreepqretentaewedrWRRAIRRCCERMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRaiplscdhkpdrPDELARIEASGGRVIFVNGARVEGILAMSRaigdgylkpvVTSEPDITFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEaaadidlnagpRMVEDERAEPLYPSRSVLAAALLTrlalgrrssdnisvividlkrnr
MTEVYQRMPSDQNDDSPAKCrerrrrrikmrrFGAIVATSSEPTASDIRKEKRTEDSDRVAEGKRMRTEAETKDTPATETDVNSSPSSGEGTEKVVSLAATTEVQAVEPIFGTMSVTGRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVRCTSGNANAGAGPSTSTREEPQRETENTaewedrwrrairrccerMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDERAEPLYPsrsvlaaalltrlalgrrssDNISVIVIDLKRNR
***************************************************************************************************ATTEVQAVEPIFGTM**************TRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVRC****************************WEDRWRRAIRRCCERMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCD********LARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAEDECLILASDGMWDVLPNNLACEVASECL*******************************RSVLAAALLTRLALGRRSSDNISVIVID*****
************************************************************************************************************PIFGTMSVTGRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVR***G*****A****************TAEWEDRWRRAIRRCCERMDEVAVS******************ALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENP**A***DLNAGPRMVEDERAEPLYPSRSVLAAALLTRLALGRRSSDNISVIVIDLKRN*
**********************RRRRRIKMRRFGAIVATS********************************************************SLAATTEVQAVEPIFGTMSVTGRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVRCTSGN************************WEDRWRRAIRRCCERMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDERAEPLYPSRSVLAAALLTRLALGRRSSDNISVIVIDLKRNR
****Y***PSDQNDDSPAKCRERRRRRIKMRRFGAIVATS*******************************************************************EPIFGTMSVTGRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVR**************************TAEWEDRWRRAIRRCCERMDEVAVSTCA*****CDCAAHS****LSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAEDECLILASDGMWDVLPNNLACEVASECLREE**************************PSRSVLAAALLTRLALGRRSSDNISVIVIDLKR**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTEVYQRMPSDQNDDSPAKCRERRRRRIKMRRFGAIVATSSEPTASDIRKEKRTEDSDRVAEGKRMRTEAETKDTPATETDVNSSPSSGEGTEKVVSLAATTEVQAVEPIFGTMSVTGRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVRCTSGNANAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCCERMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDERAEPLYPSRSVLAAALLTRLALGRRSSDNISVIVIDLKRNR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query440 2.2.26 [Sep-21-2011]
Q9FLI3416 Probable protein phosphat yes no 0.927 0.980 0.514 1e-102
Q9ZW21362 Probable protein phosphat no no 0.659 0.801 0.454 5e-71
Q9LNW3442 Protein phosphatase 2C 3 no no 0.718 0.714 0.415 1e-69
Q0J2L7358 Probable protein phosphat yes no 0.629 0.773 0.462 1e-69
Q5N9N2414 Probable protein phosphat no no 0.679 0.722 0.442 8e-67
P49597434 Protein phosphatase 2C 56 no no 0.659 0.668 0.426 5e-65
Q0JLP9467 Probable protein phosphat no no 0.686 0.646 0.412 1e-64
Q7XP01474 Probable protein phosphat no no 0.945 0.877 0.397 4e-64
Q5SN75403 Probable protein phosphat no no 0.643 0.702 0.440 1e-62
O04719423 Protein phosphatase 2C 77 no no 0.654 0.680 0.413 2e-62
>sp|Q9FLI3|P2C75_ARATH Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1 Back     alignment and function desciption
 Score =  370 bits (951), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/441 (51%), Positives = 290/441 (65%), Gaps = 33/441 (7%)

Query: 1   MTEVYQRMPSDQNDD-SPAKCRERRRRRIKMRRFGAIVATSSEPTASDIRKEKRTEDSDR 59
           MTE+Y+ + + + DD SP KCRERRRRRI+MRR  A+     EP++S  R   RT+    
Sbjct: 1   MTEIYRTISTGRGDDVSPTKCRERRRRRIEMRRQAAVFG---EPSSS--RNRDRTDMEVY 55

Query: 60  VAEGKRMRTEAETKDTPATETDVNS--SPSSGEGTEKVVSLAATTEVQAVEPIFGTMSVT 117
            +    +R +A   +      D+    +P +    +K  +     E    EP++G +SV 
Sbjct: 56  SSFDVPLRKQARRSEIGGLPADIGGFLAPPAASSCQKSEAPVWKGEETEDEPLYGIVSVM 115

Query: 118 GRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRV 177
           GRSR+MED+++ + +LC P++N +RPVHFFAVYDGHGG  VS+LC   MH  ++EE    
Sbjct: 116 GRSRKMEDSVTVKPNLCKPEVNRQRPVHFFAVYDGHGGSQVSTLCSTTMHTFVKEE---- 171

Query: 178 RCTSGNANAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCCERMDEVAVSTCACGSVG 237
                             EE +  +EN    E +WR  ++R  +RMDE+A STC CG+  
Sbjct: 172 -------------LEQNLEEEEEGSENDVV-ERKWRGVMKRSFKRMDEMATSTCVCGTSV 217

Query: 238 CDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHKPDRPDEL 297
             C     E A+SGSTAV A+LT +HIIVAN GDSRAVLCR G AIPLS DHKPDRPDE 
Sbjct: 218 PLCNCDPREAAISGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDER 277

Query: 298 ARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAEDECLILASD 357
           ARIEA+GGRV+ V+GARVEGILA SRAIGD YLKP+V  EP++TF +RE+ DECL+LASD
Sbjct: 278 ARIEAAGGRVLVVDGARVEGILATSRAIGDRYLKPMVAWEPEVTFMRRESGDECLVLASD 337

Query: 358 GMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMV-EDERAEPLYPSRSVLAAALL 416
           G+WDVL + LAC++A  CLREE P +   +DLN   RM  ED+      PSRSVLAA LL
Sbjct: 338 GLWDVLSSQLACDIARFCLREETPSS---LDLN---RMAQEDDNDGEQNPSRSVLAATLL 391

Query: 417 TRLALGRRSSDNISVIVIDLK 437
           TRLALGR+SSDNISV+VIDLK
Sbjct: 392 TRLALGRQSSDNISVVVIDLK 412
Negative regulator of abscisic acid (ABA) responses during seed germination.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9ZW21|P2C24_ARATH Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1 Back     alignment and function description
>sp|Q9LNW3|P2C03_ARATH Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1 Back     alignment and function description
>sp|Q0J2L7|P2C68_ORYSJ Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2 Back     alignment and function description
>sp|Q5N9N2|P2C09_ORYSJ Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1 Back     alignment and function description
>sp|P49597|P2C56_ARATH Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2 Back     alignment and function description
>sp|Q0JLP9|P2C06_ORYSJ Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1 Back     alignment and function description
>sp|Q7XP01|P2C37_ORYSJ Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2 Back     alignment and function description
>sp|Q5SN75|P2C08_ORYSJ Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1 Back     alignment and function description
>sp|O04719|P2C77_ARATH Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query440
255539637398 protein phosphatase 2c, putative [Ricinu 0.893 0.987 0.610 1e-133
224134599364 predicted protein [Populus trichocarpa] 0.718 0.868 0.670 1e-117
224122524382 predicted protein [Populus trichocarpa] 0.715 0.824 0.667 1e-117
449460774421 PREDICTED: probable protein phosphatase 0.945 0.988 0.592 1e-114
296084091374 unnamed protein product [Vitis vinifera] 0.838 0.986 0.543 1e-100
359490226413 PREDICTED: probable protein phosphatase 0.836 0.891 0.544 1e-100
297792489414 hypothetical protein ARALYDRAFT_495242 [ 0.925 0.983 0.514 1e-100
15242182416 protein phosphatase [Arabidopsis thalian 0.927 0.980 0.514 1e-100
147805175378 hypothetical protein VITISV_024269 [Viti 0.838 0.976 0.535 9e-99
449527123276 PREDICTED: probable protein phosphatase 0.622 0.992 0.690 4e-89
>gi|255539637|ref|XP_002510883.1| protein phosphatase 2c, putative [Ricinus communis] gi|223549998|gb|EEF51485.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/439 (61%), Positives = 320/439 (72%), Gaps = 46/439 (10%)

Query: 1   MTEVYQRMPSDQNDDSPAKCRERRRRRIKMRRFGAIVATSSEPTASDIRKEKRTEDSDRV 60
           MT+V +RM SD +DDSPAKCRERRRRRI+MRR  ++  + +   AS    + + E S+ V
Sbjct: 1   MTDVCRRMLSDDDDDSPAKCRERRRRRIEMRRLSSLPVSGTPSPAS----KSQVESSNSV 56

Query: 61  AEGKRMRTEAETKDTPATETDVNSSPSSGEGTEKVVSLAATTEVQAVEPIFGTMSVTGRS 120
           A  K+++                      +G E              EP FGTMSV GRS
Sbjct: 57  ANEKQIKIV--------------------DGVEN-------------EPTFGTMSVAGRS 83

Query: 121 REMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVRCT 180
            +MEDA++ R SLC PDIN RRPVH+FAVYDGHGG HV++LC+E+MHV++E ELMR   T
Sbjct: 84  SDMEDAVAVRISLCKPDINNRRPVHYFAVYDGHGGSHVAALCRERMHVVLEGELMRTDHT 143

Query: 181 -SGNANAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCCERMDEVAVSTCACGSVGCD 239
            +G +  G G S+S +E   RE +    WE++W+  + R  ++MDE A+STCACGS+G D
Sbjct: 144 DNGESGEGRGKSSSPKEREFREGKYG--WEEQWKSVLIRSFKKMDEAALSTCACGSIGFD 201

Query: 240 CAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELAR 299
           C  H MEVAL GSTAVVA+LT EHIIVANCGDSRAVLCR GRAIPLS DHKPDR DE AR
Sbjct: 202 CGCHPMEVALGGSTAVVAILTPEHIIVANCGDSRAVLCRGGRAIPLSVDHKPDRSDEFAR 261

Query: 300 IEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAEDECLILASDGM 359
           I+A+GGRVIFVNGARVEGILAMSRAIGD YLKPVVTSEP+ITFT+RE +DECLILASDG+
Sbjct: 262 IKAAGGRVIFVNGARVEGILAMSRAIGDKYLKPVVTSEPEITFTRREPDDECLILASDGL 321

Query: 360 WDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDERAEPLYPSRSVLAAALLTRL 419
           WDVL ++LACEVASECLRE +P  A     NA P M EDE    LYPSRS+LAAA+LTRL
Sbjct: 322 WDVLSSDLACEVASECLREGSPTVA-----NARPNM-EDEEGGALYPSRSILAAAILTRL 375

Query: 420 ALGRRSSDNISVIVIDLKR 438
           ALGRRS+DNISVIV+DLKR
Sbjct: 376 ALGRRSADNISVIVVDLKR 394

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224134599|ref|XP_002321862.1| predicted protein [Populus trichocarpa] gi|222868858|gb|EEF05989.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224122524|ref|XP_002318858.1| predicted protein [Populus trichocarpa] gi|222859531|gb|EEE97078.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449460774|ref|XP_004148120.1| PREDICTED: probable protein phosphatase 2C 75-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296084091|emb|CBI24479.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359490226|ref|XP_002271035.2| PREDICTED: probable protein phosphatase 2C 75 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297792489|ref|XP_002864129.1| hypothetical protein ARALYDRAFT_495242 [Arabidopsis lyrata subsp. lyrata] gi|297309964|gb|EFH40388.1| hypothetical protein ARALYDRAFT_495242 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15242182|ref|NP_199989.1| protein phosphatase [Arabidopsis thaliana] gi|75309185|sp|Q9FLI3.1|P2C75_ARATH RecName: Full=Probable protein phosphatase 2C 75; Short=AtPP2C75; AltName: Full=Protein ABA-HYPERSENSITIVE GERMINATION 1; AltName: Full=Protein phosphatase 2C AHG1; Short=PP2C AHG1 gi|10177875|dbj|BAB11245.1| protein phosphatase-2C; PP2C-like protein [Arabidopsis thaliana] gi|332008740|gb|AED96123.1| protein phosphatase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|147805175|emb|CAN73343.1| hypothetical protein VITISV_024269 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449527123|ref|XP_004170562.1| PREDICTED: probable protein phosphatase 2C 75-like, partial [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query440
TAIR|locus:2165371416 AHG1 "ABA-hypersensitive germi 0.479 0.507 0.587 3.1e-87
TAIR|locus:2080787399 PP2CA "protein phosphatase 2CA 0.35 0.385 0.629 1.2e-64
TAIR|locus:2025087442 HAI2 "highly ABA-induced PP2C 0.468 0.466 0.475 2.6e-63
TAIR|locus:2043142362 HAI3 "highly ABA-induced PP2C 0.456 0.555 0.474 3.3e-61
TAIR|locus:2168449413 HAI1 "highly ABA-induced PP2C 0.486 0.518 0.484 4.8e-58
TAIR|locus:2005488434 ABI1 "ABA INSENSITIVE 1" [Arab 0.445 0.451 0.495 1.6e-57
TAIR|locus:2030230511 HAB1 "AT1G72770" [Arabidopsis 0.409 0.352 0.521 4.2e-55
TAIR|locus:2164610423 ABI2 "AT5G57050" [Arabidopsis 0.434 0.451 0.485 1.1e-54
TAIR|locus:2007943511 HAB2 "homology to ABI2" [Arabi 0.572 0.493 0.419 2.3e-46
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.281 0.334 0.504 8.1e-35
TAIR|locus:2165371 AHG1 "ABA-hypersensitive germination 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 613 (220.8 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
 Identities = 128/218 (58%), Positives = 151/218 (69%)

Query:   223 MDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRA 282
             MDE+A STC CG+    C     E A+SGSTAV A+LT +HIIVAN GDSRAVLCR G A
Sbjct:   203 MDEMATSTCVCGTSVPLCNCDPREAAISGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMA 262

Query:   283 IPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITF 342
             IPLS DHKPDRPDE ARIEA+GGRV+ V+GARVEGILA SRAIGD YLKP+V  EP++TF
Sbjct:   263 IPLSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIGDRYLKPMVAWEPEVTF 322

Query:   343 TKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMV-EDERA 401
              +RE+ DECL+LASDG+WDVL + LAC++A  CLREE P +   +DLN   RM  ED+  
Sbjct:   323 MRRESGDECLVLASDGLWDVLSSQLACDIARFCLREETPSS---LDLN---RMAQEDDND 376

Query:   402 EPLYPXXXXXXXXXXXXXXXXXXXXDNISVIVIDLKRN 439
                 P                    DNISV+VIDLK +
Sbjct:   377 GEQNPSRSVLAATLLTRLALGRQSSDNISVVVIDLKNS 414
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP
GO:0009062 "fatty acid catabolic process" evidence=RCA
GO:0009640 "photomorphogenesis" evidence=RCA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0009845 "seed germination" evidence=RCA
GO:0009909 "regulation of flower development" evidence=RCA
GO:0009933 "meristem structural organization" evidence=RCA
GO:0010162 "seed dormancy process" evidence=RCA
GO:0010182 "sugar mediated signaling pathway" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0016114 "terpenoid biosynthetic process" evidence=RCA
GO:0016567 "protein ubiquitination" evidence=RCA
GO:0019915 "lipid storage" evidence=RCA
GO:0050826 "response to freezing" evidence=RCA
TAIR|locus:2080787 PP2CA "protein phosphatase 2CA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025087 HAI2 "highly ABA-induced PP2C gene 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043142 HAI3 "highly ABA-induced PP2C gene 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168449 HAI1 "highly ABA-induced PP2C gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005488 ABI1 "ABA INSENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030230 HAB1 "AT1G72770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164610 ABI2 "AT5G57050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007943 HAB2 "homology to ABI2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FLI3P2C75_ARATH3, ., 1, ., 3, ., 1, 60.51470.92720.9807yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.824
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_XII000477
hypothetical protein (382 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 3e-78
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 4e-74
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 5e-57
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-29
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 5e-28
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-21
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  243 bits (621), Expect = 3e-78
 Identities = 110/327 (33%), Positives = 151/327 (46%), Gaps = 74/327 (22%)

Query: 110 IFGTMSVTGRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVI 169
             G     G  +  EDA+  + +L + D         F V+DGHGG        + +   
Sbjct: 2   SAGVSDKGGDRKTNEDAVVIKPNLNNEDG------GLFGVFDGHGGHAAGEFASKLLV-- 53

Query: 170 MEEELMRVRCTSGNANAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCCERMDEVAVS 229
             EEL+                    E  +  T +  + E+  R+A  R  E + E A  
Sbjct: 54  --EELLE-------------------ELEETLTLSEEDIEEALRKAFLRADEEILEEAQD 92

Query: 230 TCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDH 289
                           + A SG+TAVVAL+    + VAN GDSRAVLCR G A+ L+ DH
Sbjct: 93  --------------EPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDH 138

Query: 290 KPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDITFTKREAED 349
           KP   +E  RIE +GGRV      RV G+LA++RA+GD  LKP V++EPD+T  K   +D
Sbjct: 139 KPVNEEERERIEKAGGRVSNG---RVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDD 195

Query: 350 ECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDERAEPLYPSRS 409
           + LILASDG+WDVL N  A ++    L +E+ + AA                        
Sbjct: 196 DFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQ----------------------- 232

Query: 410 VLAAALLTRLALGRRSSDNISVIVIDL 436
                 L  LAL R S DNI+V+V+ L
Sbjct: 233 -----ELVDLALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 440
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 100.0
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.91
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.88
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.8
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.71
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.51
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.37
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.92
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-50  Score=405.66  Aligned_cols=258  Identities=33%  Similarity=0.513  Sum_probs=215.3

Q ss_pred             CceEEEeecccCCCCCCcceeeccCCCCCC---CCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013591          108 EPIFGTMSVTGRSREMEDAISTRTSLCSPD---INWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVRCTSGNA  184 (440)
Q Consensus       108 ~~~~g~~s~~G~R~~nED~~~v~~~~~~~~---~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~~~  184 (440)
                      .+.++.+|++|.|..|||++++..++....   .....+..||||||||||+.+|+||+++++..|.+....        
T Consensus        64 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~--------  135 (365)
T PLN03145         64 VVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDF--------  135 (365)
T ss_pred             ceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhcc--------
Confidence            367899999999999999998765442110   011234689999999999999999999999988653111        


Q ss_pred             CCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccccccccccCCceEEEEEEeCCeE
Q 013591          185 NAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCCERMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHI  264 (440)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~~i~~~~l  264 (440)
                                              ...+.++|.++|..+++.+......           .....+|||+++++|.++++
T Consensus       136 ------------------------~~~~~~al~~af~~~d~~~~~~~~~-----------~~~~~~GTTavv~li~~~~l  180 (365)
T PLN03145        136 ------------------------PREIEKVVSSAFLQTDTAFAEACSL-----------DASLASGTTALAALVVGRSL  180 (365)
T ss_pred             ------------------------chhHHHHHHHHHHHHhHHHHhhhcc-----------ccCCCCcCcEEEEEEECCeE
Confidence                                    2256788999999999998764311           11235999999999999999


Q ss_pred             EEEeeCCceEEEEeCCeeeecCCCCCCCCHhHHHHHHHcCCeEEEecCeeecCcchhhhhccCCCCCC-------CccCC
Q 013591          265 IVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKP-------VVTSE  337 (440)
Q Consensus       265 ~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~r~~G~l~vtRalGd~~~k~-------~v~~~  337 (440)
                      |||||||||+|++++|++++||+||+|.++.|++||++.||.+.   ..++.|.+.+||||||..+|.       .++++
T Consensus       181 ~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~e  257 (365)
T PLN03145        181 VVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVY---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAE  257 (365)
T ss_pred             EEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCcee---cceECCccccccccccccccccccccCCCcceE
Confidence            99999999999999999999999999999999999999999774   458889999999999988763       37899


Q ss_pred             CceeEEeecCCCeEEEEEcCCCCCCCChHHHHHHHHHHhhhcCchhhhhhcccCCCccccccccCCCCCChhHHHHHHHH
Q 013591          338 PDITFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDERAEPLYPSRSVLAAALLT  417 (440)
Q Consensus       338 Pdi~~~~l~~~d~~lVL~SDGlwd~ls~~eI~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~  417 (440)
                      |+|..+.+.++|+|||||||||||+|++++++++++..+....                           .+.++|+.|+
T Consensus       258 Pdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~---------------------------~p~~aa~~Lv  310 (365)
T PLN03145        258 PELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHN---------------------------DPVMCSKELV  310 (365)
T ss_pred             EEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCC---------------------------CHHHHHHHHH
Confidence            9999999999999999999999999999999999987654321                           1236889999


Q ss_pred             HHHhhCCCCCCeEEEEEEecC
Q 013591          418 RLALGRRSSDNISVIVIDLKR  438 (440)
Q Consensus       418 ~~A~~~gs~DNiTvIVv~l~~  438 (440)
                      +.|+.+++.||||||||.|+.
T Consensus       311 ~~Al~rgs~DNITvIVV~l~~  331 (365)
T PLN03145        311 DEALKRKSGDNLAVVVVCFQS  331 (365)
T ss_pred             HHHHhCCCCCCEEEEEEEeec
Confidence            999999999999999999985

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 1e-57
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 6e-57
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 9e-57
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 9e-57
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 1e-56
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-56
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-56
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-56
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-56
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-53
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 6e-26
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 6e-25
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 6e-25
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 4e-24
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-19
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 5e-19
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 1e-10
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 2e-10
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 4e-10
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 8e-10
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 4e-05
2pom_A372 Tab1 With Manganese Ion Length = 372 5e-05
2j4o_A401 Structure Of Tab1 Length = 401 5e-05
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 7e-04
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure 
Iteration: 1

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/340 (38%), Positives = 178/340 (52%), Gaps = 48/340 (14%)
Query: 109 PIFGTMSVTGRSREMEDAIST--------RTSLCSPDINWRRPVHFFAVYDGHGGRHVSS 160
           P++G  S+ GR  EMEDA+ST          S+     + +   HFF VYDGHGG  V++
Sbjct: 9   PLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVAN 68
Query: 161 LCKEKMHVIMEEELMRVRCTSGNANAGAGPSTSTREEPQRETENTXXXXXXXXXXXXXXX 220
            C+E+MH+ + EE+                    +E+P     +T               
Sbjct: 69  YCRERMHLALAEEI-------------------AKEKPMLSDGDTWL------------- 96
Query: 221 XXMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAG 280
               E          +  D    S+     GST+VVA++   HI VANCGDSRAVLCR  
Sbjct: 97  ----EKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK 152
Query: 281 RAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDI 340
            A+PLS DHKPDR DE ARIEA+GG+VI  NGARV G+LAMSR+IGD YLKP +  +P++
Sbjct: 153 TALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEV 212
Query: 341 TFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDER 400
           T  KR  ED+CLILASDG+WDV+ +  ACE+A + +   + + A    +  G  ++ DER
Sbjct: 213 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNA----VAGGASLLADER 268
Query: 401 AEPLYPXXXXXXXXXXXXXXXXXXXXDNISVIVIDLKRNR 440
            +                        DNISV+V+DLK  R
Sbjct: 269 RKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRR 308
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-105
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-104
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 3e-92
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 2e-90
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 5e-90
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-88
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 3e-86
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-84
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-79
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 6e-73
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 3e-68
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-67
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-53
1txo_A237 Putative bacterial enzyme; serine/threonine protei 4e-12
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-11
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 1e-10
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 2e-10
3rnr_A211 Stage II sporulation E family protein; structural 6e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
 Score =  312 bits (802), Expect = e-105
 Identities = 136/340 (40%), Positives = 190/340 (55%), Gaps = 48/340 (14%)

Query: 109 PIFGTMSVTGRSREMEDAISTRTSLCSPD--------INWRRPVHFFAVYDGHGGRHVSS 160
           P++G  S+ GR  EMEDA+ST                 + +   HFF VYDGHGG  V++
Sbjct: 9   PLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVAN 68

Query: 161 LCKEKMHVIMEEELMRVRCTSGNANAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCC 220
            C+E+MH+ + EE+ + +    + +                      W ++W++A+    
Sbjct: 69  YCRERMHLALAEEIAKEKPMLSDGD---------------------TWLEKWKKALFNSF 107

Query: 221 ERMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAG 280
            R+D                   S+     GST+VVA++   HI VANCGDSRAVLCR  
Sbjct: 108 LRVDS---------------EIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK 152

Query: 281 RAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLKPVVTSEPDI 340
            A+PLS DHKPDR DE ARIEA+GG+VI  NGARV G+LAMSR+IGD YLKP +  +P++
Sbjct: 153 TALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEV 212

Query: 341 TFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDER 400
           T  KR  ED+CLILASDG+WDV+ +  ACE+A + +   + + A     +        E 
Sbjct: 213 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEG 272

Query: 401 AEPLYPSRSVLAAALLTRLALGRRSSDNISVIVIDLKRNR 440
            +P     ++ AA  L++LA+ R S DNISV+V+DLK  R
Sbjct: 273 KDP----AAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRR 308
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query440
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.84
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.8
3f79_A255 Probable two-component response regulator; adaptor 99.69
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.68
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.17
3eq2_A394 Probable two-component response regulator; adaptor 98.17
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=2.6e-51  Score=409.39  Aligned_cols=306  Identities=44%  Similarity=0.708  Sum_probs=233.6

Q ss_pred             CCCceEEEeecccCCCCCCcceeeccCCCCCC----------C---CCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH
Q 013591          106 AVEPIFGTMSVTGRSREMEDAISTRTSLCSPD----------I---NWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEE  172 (440)
Q Consensus       106 ~~~~~~g~~s~~G~R~~nED~~~v~~~~~~~~----------~---~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~  172 (440)
                      ...+.||.++++|+|.+|||++.+..++....          .   ....+..||||||||||+.+|++|+++++..|.+
T Consensus        11 ~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~   90 (337)
T 3qn1_B           11 DCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAE   90 (337)
T ss_dssp             CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHH
T ss_pred             cccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHH
Confidence            34567999999999999999999876543100          0   0112578999999999999999999999999998


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC-CCccccccccccCC
Q 013591          173 ELMRVRCTSGNANAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCCERMDEVAVSTCACGSVG-CDCAAHSMEVALSG  251 (440)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~-~~~~~~~~~~~~~G  251 (440)
                      .+..........                  .........+.++|+++|..+|+.+.......... ............+|
T Consensus        91 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~G  152 (337)
T 3qn1_B           91 EIERIKDELCKR------------------NTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVG  152 (337)
T ss_dssp             HHHHTC------------------------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCE
T ss_pred             HHHhhhhhhhcc------------------ccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCC
Confidence            877622110000                  00011235688999999999999998754211000 00011122345799


Q ss_pred             ceEEEEEEeCCeEEEEeeCCceEEEEeCCeeeecCCCCCCCCHhHHHHHHHcCCeEEEecCeeecCcchhhhhccCCCCC
Q 013591          252 STAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLK  331 (440)
Q Consensus       252 tTa~v~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~r~~G~l~vtRalGd~~~k  331 (440)
                      ||++++++.++++|||||||||+|++|+|++++||+||++.++.|+.||..+||.+..++..+++|.+.+||+|||..+|
T Consensus       153 tT~~~~~i~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~  232 (337)
T 3qn1_B          153 STAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLK  232 (337)
T ss_dssp             ECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGT
T ss_pred             ceEEEEEEECCEEEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCcccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999988889999999999999999999


Q ss_pred             CCccCCCceeEEeecCCCeEEEEEcCCCCCCCChHHHHHHHHHHhhhcCchhhhhhcccCCCccccccccCCCCCChhHH
Q 013591          332 PVVTSEPDITFTKREAEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDERAEPLYPSRSVL  411 (440)
Q Consensus       332 ~~v~~~Pdi~~~~l~~~d~~lVL~SDGlwd~ls~~eI~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (440)
                      ++++++|++..+.+.+.++|||||||||||+|++++|+++++..+.........       ....+  . .......+..
T Consensus       233 ~~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~-------~~~~~--~-~~~~~~~~~~  302 (337)
T 3qn1_B          233 PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGA-------PPLAE--R-GKGIDPACQA  302 (337)
T ss_dssp             TTSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCC-------C------C-CSSCCHHHHH
T ss_pred             CCCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhcccccc-------ccccc--c-ccccChhHHH
Confidence            999999999999998888899999999999999999999998743210000000       00000  0 0001123557


Q ss_pred             HHHHHHHHHhhCCCCCCeEEEEEEecCC
Q 013591          412 AAALLTRLALGRRSSDNISVIVIDLKRN  439 (440)
Q Consensus       412 ~A~~L~~~A~~~gs~DNiTvIVv~l~~~  439 (440)
                      +|+.|++.|+.+|+.||||||||+|+..
T Consensus       303 ~a~~Lv~~A~~~g~~DNiTvivv~l~~~  330 (337)
T 3qn1_B          303 AADYLSMLALQKGSKDNISIIVIDLKAQ  330 (337)
T ss_dssp             HHHHHHHHHHHTTCCSCEEEEEEECCSC
T ss_pred             HHHHHHHHHHHcCCCCCEEEEEEEecCC
Confidence            8999999999999999999999999864
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 440
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 5e-41
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-20
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 5e-41
 Identities = 92/338 (27%), Positives = 130/338 (38%), Gaps = 78/338 (23%)

Query: 111 FGTMSVTGRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIM 170
           +G  S+ G   EMEDA +    L S   +W     FFAVYDGH G  V+  C E +   +
Sbjct: 23  YGLSSMQGWRVEMEDAHTAVIGLPSGLESW----SFFAVYDGHAGSQVAKYCCEHLLDHI 78

Query: 171 EEELMRVRCTSGNANAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCCERMDEVAVST 230
                                         +    A   +  +  IR     +DE     
Sbjct: 79  TNNQ------------------------DFKGSAGAPSVENVKNGIRTGFLEIDEH---- 110

Query: 231 CACGSVGCDCAAHSMEVALSGSTAVVALLTSEHIIVANCGDSRAVLCRAGRAIPLSCDHK 290
                     +        SGSTAV  L++ +H    NCGDSR +LCR  +    + DHK
Sbjct: 111 ------MRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHK 164

Query: 291 PDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLK---------PVVTSEPDIT 341
           P  P E  RI+ +GG V+     RV G LA+SRA+GD   K          +V+ EP++ 
Sbjct: 165 PSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVH 221

Query: 342 FTKREAE-DECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDER 400
             +R  E D+ +ILA DG+WDV+ N   C+     L   +                    
Sbjct: 222 DIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEK---------------- 265

Query: 401 AEPLYPSRSVLAAALLTRLALGRRSSDNISVIVIDLKR 438
                          +    L + S DN+SVI+I    
Sbjct: 266 -----------VCNEVVDTCLYKGSRDNMSVILICFPN 292
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query440
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-54  Score=418.20  Aligned_cols=267  Identities=34%  Similarity=0.478  Sum_probs=224.7

Q ss_pred             CCCCceEEEeecccCCCCCCcceeeccCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013591          105 QAVEPIFGTMSVTGRSREMEDAISTRTSLCSPDINWRRPVHFFAVYDGHGGRHVSSLCKEKMHVIMEEELMRVRCTSGNA  184 (440)
Q Consensus       105 ~~~~~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~~~  184 (440)
                      ....+.||+++++|+|++|||++.+..++...    ..++.||||||||||+.+|++++++++..|.+.+......    
T Consensus        17 ~~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~----~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~----   88 (295)
T d1a6qa2          17 QGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSG----LESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSA----   88 (295)
T ss_dssp             EETTEEEEEEEEEETSSSCCEEEEEEEEETTT----EEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSS----
T ss_pred             cCCceEEEEEeCccCCCcccCeeEEEcccCCC----CCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhcccc----
Confidence            45678999999999999999999887654221    2567899999999999999999999999988765442111    


Q ss_pred             CCCCCCCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccccccccccCCceEEEEEEeCCeE
Q 013591          185 NAGAGPSTSTREEPQRETENTAEWEDRWRRAIRRCCERMDEVAVSTCACGSVGCDCAAHSMEVALSGSTAVVALLTSEHI  264 (440)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~~i~~~~l  264 (440)
                                          .....+.+.++|+++|..+++.+.......          .....+|||+++++|.++++
T Consensus        89 --------------------~~~~~~~~~~al~~a~~~~~~~~~~~~~~~----------~~~~~~GtTa~~~~i~~~~l  138 (295)
T d1a6qa2          89 --------------------GAPSVENVKNGIRTGFLEIDEHMRVMSEKK----------HGADRSGSTAVGVLISPQHT  138 (295)
T ss_dssp             --------------------SSCCHHHHHHHHHHHHHHHHHHHHHHHHHT----------TCCCCCEECEEEEEECSSEE
T ss_pred             --------------------ccchHHHHHHHHHHHHHHHHHHHhhhhhhc----------cCcCCCCCeEEEEEeeCCEE
Confidence                                111245788999999999999887543211          22347899999999999999


Q ss_pred             EEEeeCCceEEEEeCCeeeecCCCCCCCCHhHHHHHHHcCCeEEEecCeeecCcchhhhhccCCCCC---------CCcc
Q 013591          265 IVANCGDSRAVLCRAGRAIPLSCDHKPDRPDELARIEASGGRVIFVNGARVEGILAMSRAIGDGYLK---------PVVT  335 (440)
Q Consensus       265 ~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~r~~G~l~vtRalGd~~~k---------~~v~  335 (440)
                      |||||||||+|++++|++++||.||+|.++.|++||+..||.+.   ..+++|.+.+||+|||..+|         ++|+
T Consensus       139 ~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~Ri~~~gg~v~---~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~  215 (295)
T d1a6qa2         139 YFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVS  215 (295)
T ss_dssp             EEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTCCEE---TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSB
T ss_pred             EEEecCCCeEEEeecccceeeccccCcccHHHHhhHhhcCCccc---ccccCCceeeeeccCcHHhhhccccCccccccc
Confidence            99999999999999999999999999999999999999999764   57999999999999999887         4599


Q ss_pred             CCCceeEEeec-CCCeEEEEEcCCCCCCCChHHHHHHHHHHhhhcCchhhhhhcccCCCccccccccCCCCCChhHHHHH
Q 013591          336 SEPDITFTKRE-AEDECLILASDGMWDVLPNNLACEVASECLREENPEAAADIDLNAGPRMVEDERAEPLYPSRSVLAAA  414 (440)
Q Consensus       336 ~~Pdi~~~~l~-~~d~~lVL~SDGlwd~ls~~eI~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~  414 (440)
                      ++|+|..+.+. ++++|||||||||||+|+++||+++++..+....                           .+..+|+
T Consensus       216 ~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~---------------------------~~~~~a~  268 (295)
T d1a6qa2         216 PEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTD---------------------------DLEKVCN  268 (295)
T ss_dssp             CCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCC---------------------------CHHHHHH
T ss_pred             ccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCC---------------------------CHHHHHH
Confidence            99999999886 4567999999999999999999999988654322                           2346899


Q ss_pred             HHHHHHhhCCCCCCeEEEEEEecCC
Q 013591          415 LLTRLALGRRSSDNISVIVIDLKRN  439 (440)
Q Consensus       415 ~L~~~A~~~gs~DNiTvIVv~l~~~  439 (440)
                      .|++.|+.+++.||||||||+|++.
T Consensus       269 ~Lv~~A~~~gs~DNiTvivv~~~~~  293 (295)
T d1a6qa2         269 EVVDTCLYKGSRDNMSVILICFPNA  293 (295)
T ss_dssp             HHHHHHHHTTCCSCEEEEEEECTTS
T ss_pred             HHHHHHHhcCCCCCeEEEEEeccCC
Confidence            9999999999999999999999864
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure