BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013595
(439 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BUV8|GP107_MOUSE Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2
Length = 551
Score = 246 bits (627), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 183/299 (61%), Gaps = 9/299 (3%)
Query: 134 YSLFFANCA-----PETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGF 188
YSL+F C+ P Q S ++ + + + YLSAG LP L+ ++ +
Sbjct: 219 YSLYFHKCSGNNVKPGEQASFSLNIAITEKNPNS---YLSAGEIPLPKLYVSMALFFFLS 275
Query: 189 FGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIF 247
IWI+I + V +IH +M L K+L+L+ A D HY+ G P GW V++YI
Sbjct: 276 GTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYIT 335
Query: 248 QFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPLQVLANVASVVIGETGPFIKD 307
++ LLF I LIGTGW+F+K L +++KK+ MIVIPLQVLANVA ++I T +
Sbjct: 336 HLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTE 395
Query: 308 WVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGY 367
+ W LVD++CC AI+FP+VWSIR L+E S TDGKAA NLAKL LFR +Y++++ Y
Sbjct: 396 YGLWKDSLFLVDLLCCGAILFPVVWSIRHLQEASATDGKAAINLAKLRLFRHYYVLIVCY 455
Query: 368 LYFTRIVVFALKTIAAYKYQWVSNAAEELASLAFYIVIFYMFRPLETNEYFVLDEEEEE 426
+YFTRI+ F LK ++++W+ +E A+L F+++ Y FRP N Y L +E+++
Sbjct: 456 IYFTRIIAFLLKFAVPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPYLQLSQEDDD 514
>sp|Q9NPR9|GP108_HUMAN Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3
Length = 543
Score = 228 bits (581), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 183/313 (58%), Gaps = 9/313 (2%)
Query: 132 NEYSLFFANC---APETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGF 188
+YSL F NC P + ++ + + DG +LSA L L+ S ++
Sbjct: 218 GQYSLNFHNCNNSVPGKEHPFDITVMIREKNPDG---FLSAAEMPLFKLYMVMSACFLAA 274
Query: 189 FGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIF 247
W+ I N SV +IH +M L K+++L+ + + +++ G P G V++YI
Sbjct: 275 GIFWVSILCRNTYSVFKIHWLMAALAFTKSISLLFHSINYYFINSQGHPIEGLAVMYYIA 334
Query: 248 QFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPLQVLANVASVVIGETGPFIKD 307
++ LLF I LIG+GW+F+K L ++EKKV IVIP+QVLANVA ++I D
Sbjct: 335 HLLKGALLFITIALIGSGWAFIKYVLSDKEKKVFGIVIPMQVLANVAYIIIESREEGASD 394
Query: 308 WVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGY 367
+V W ++ LVD+ICC AI+FP+VWSIR L++ S TDGK A NLAKL LFR +Y++VI Y
Sbjct: 395 YVLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICY 454
Query: 368 LYFTRIVVFALKTIAAYKYQWVSNAAEELASLAFYIVIFYMFRPLETNEYFVLDEEEEE- 426
+YFTRI+ L+ +++QW+ E ++LAF+++ Y F+P N Y L +E+EE
Sbjct: 455 VYFTRIIAILLQVAVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPTGNNPYLQLPQEDEED 514
Query: 427 -AAEQALRDEEFE 438
EQ + D F
Sbjct: 515 VQMEQVMTDSGFR 527
>sp|Q5VW38|GP107_HUMAN Protein GPR107 OS=Homo sapiens GN=GPR107 PE=1 SV=1
Length = 600
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 182/346 (52%), Gaps = 56/346 (16%)
Query: 134 YSLFFANCA----PETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGFF 189
YSL+F C P + + ++ E+ + D YLSAG LP L+ + +
Sbjct: 221 YSLYFHKCLGKELPSDKFTFSLDIEITEKNPD---SYLSAGEIPLPKLYISMAFFFFLSG 277
Query: 190 GIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIFQ 248
IWI+I + V +IH +M L K+L+L+ A D HY+ G P GW V++YI
Sbjct: 278 TIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITH 337
Query: 249 FIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPLQVLANVASVVIGETGPFIKDW 308
++ LLF I LIGTGW+F+K L +++KK+ MIVIPLQVLANVA ++I T ++
Sbjct: 338 LLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEY 397
Query: 309 VTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGK---------------------- 346
W LVD++CC AI+FP+VWSIR L+E S TDGK
Sbjct: 398 GLWKDSLFLVDLLCCGAILFPVVWSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESH 457
Query: 347 --------------------------AARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKT 380
AA NLAKL LFR +Y++++ Y+YFTRI+ F LK
Sbjct: 458 HFAQADLELLASSCPPASVSQRAGITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKL 517
Query: 381 IAAYKYQWVSNAAEELASLAFYIVIFYMFRPLETNEYFVLDEEEEE 426
++++W+ +E A+L F+++ Y FRP N Y L +EEE+
Sbjct: 518 AVPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPYLQLSQEEED 563
>sp|Q148L1|GP108_BOVIN Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1
Length = 548
Score = 224 bits (572), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 182/313 (58%), Gaps = 9/313 (2%)
Query: 132 NEYSLFFANC---APETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGF 188
+Y+L F NC P + ++ + + +G YLSA L L+ S ++G
Sbjct: 223 GQYNLNFHNCDNSVPGREQPFDITVMIREKNPEG---YLSAAEIPLFKLYMVMSACFLGA 279
Query: 189 FGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIF 247
W+ I N +V +IH +M L K+++L+ + + +++ G P G V+ YI
Sbjct: 280 GIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYIT 339
Query: 248 QFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPLQVLANVASVVIGETGPFIKD 307
++ LLF I LIG+GW+F+K L ++EKK+ IVIPLQVLANVA +V+ D
Sbjct: 340 HLLKGALLFITIALIGSGWAFVKYVLSDKEKKIFGIVIPLQVLANVAYIVMESREEGASD 399
Query: 308 WVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGY 367
+ W ++ LVD+ICC I+FP+VWSIR L++ S TDGK A NLAKL LFR +Y++VI Y
Sbjct: 400 YGIWKEILFLVDLICCGTILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICY 459
Query: 368 LYFTRIVVFALKTIAAYKYQWVSNAAEELASLAFYIVIFYMFRPLETNEYFVLDEEEEEA 427
+YFTRI+ L+ + +++QW+ E ++LAF+++ Y F+P N Y L +E+EE
Sbjct: 460 IYFTRIIAILLRAVVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPARDNPYLQLPQEDEEG 519
Query: 428 A--EQALRDEEFE 438
EQ + D F
Sbjct: 520 MQIEQVMTDSGFR 532
>sp|Q6P6V6|GP108_RAT Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1
Length = 577
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 181/314 (57%), Gaps = 10/314 (3%)
Query: 132 NEYSLFFANC---APETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGF 188
+YSL F NC P + ++ + + +G +LSA L L+ S ++
Sbjct: 251 GQYSLNFHNCYNTIPGQEQPFDLTVMIREKNPEG---FLSAAEIPLFKLYLIMSACFLAA 307
Query: 189 FGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIF 247
W+ + N SV +IH +M L K+++L+ + + +++ G P G V+ YI
Sbjct: 308 GIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYIT 367
Query: 248 QFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPLQVLANVASVVIGETGPFIKD 307
++ LLF I LIG+GW+F+K L ++EKK+ IVIPLQVLANVA +VI D
Sbjct: 368 HLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREEGASD 427
Query: 308 WVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGY 367
+ W ++ LVD+ICC AI+FP+VWSIR L++ S TDGK A NLAKL LFR +Y++VI Y
Sbjct: 428 YGLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAMNLAKLKLFRHYYVMVICY 487
Query: 368 LYFTRIVVFALKTIAAYKYQWVSNAAEELASLAFYIVIFYMFRPLETNEYFVLDEEEEE- 426
+YFTRI+ L+ +++QW+ E ++LAF+++ Y F+P N Y L ++E+E
Sbjct: 488 IYFTRIIAILLRVAVPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPYLQLPQQEDEE 547
Query: 427 --AAEQALRDEEFE 438
EQ + D F
Sbjct: 548 DVQMEQVMTDSGFR 561
>sp|Q91WD0|GP108_MOUSE Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1
Length = 569
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 181/313 (57%), Gaps = 9/313 (2%)
Query: 132 NEYSLFFANCA---PETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGF 188
+YSL F NC P + ++ + + +G +LSA L L+ S ++
Sbjct: 244 GQYSLNFHNCHNSIPGQEQPFDLTVMIREKNPEG---FLSAAEIPLFKLYLIMSACFLAA 300
Query: 189 FGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIF 247
W+ + N SV +IH +M L K+++L+ + + +++ G P G V+ YI
Sbjct: 301 DIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYIT 360
Query: 248 QFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPLQVLANVASVVIGETGPFIKD 307
++ LLF I LIG+GW+F+K L ++EKK+ IVIPLQVLANVA +VI D
Sbjct: 361 HLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREEGASD 420
Query: 308 WVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGY 367
+ W ++ LVD+ICC AI+FP+VWSIR L++ S TDGK A NLA+L LFR +Y++VI Y
Sbjct: 421 YGLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLARLKLFRHYYVMVICY 480
Query: 368 LYFTRIVVFALKTIAAYKYQWVSNAAEELASLAFYIVIFYMFRPLETNEYFVLDEEEEE- 426
+YFTRI+ L+ +++QW+ E ++LAF+++ Y F+P N Y L +E+EE
Sbjct: 481 IYFTRIIAILLQVAVPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPYLQLPQEDEED 540
Query: 427 -AAEQALRDEEFE 438
EQ + D F
Sbjct: 541 VQMEQVMTDSGFR 553
>sp|Q96K49|TM87B_HUMAN Transmembrane protein 87B OS=Homo sapiens GN=TMEM87B PE=1 SV=1
Length = 555
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 146/357 (40%), Gaps = 34/357 (9%)
Query: 93 QNPNF-CVLDSHYILRLFNFRELSPPPHSRFEQSYPVTAPNE---YSLFFANCAPE-TQV 147
+N N C DS L N ++ S E+S V A + + +F + E T
Sbjct: 133 KNENLDCNSDSQVFPSLNNKELINIRNVSNQERSMDVVARTQKDGFHIFIVSIKTENTDA 192
Query: 148 SMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGFFGIWIYICLTNKRSVHRIH 207
S N+ +L G Y+SA L + ++YI + +W+ + + RI
Sbjct: 193 SWNLNV---SLSMIGPHGYISASDWPLMIFYMVMCIVYILYGILWLTWSACYWKDILRIQ 249
Query: 208 LVMGILLIMKALNLICAAEDKHYVKVTG-TPHGWDVLFYIFQFIRVVLLFTVIVLIGTGW 266
+ ++ + L + + TG + G + + I+ L +++++ G+
Sbjct: 250 FWIAAVIFLGMLEKAVFYSEYQNISNTGLSTQGLLIFAELISAIKRTLARLLVIIVSLGY 309
Query: 267 SFLKPFLQEREKKVLMIVIPLQVLANVASV--VIGETGPFIKDWVTWNQVFLLVDIICCC 324
+KP L +V+ + + + A V V VIG + N + +++D I
Sbjct: 310 GIVKPRLGTVMHRVIGLGLLYLIFAAVEGVMRVIGGS----------NHLAVVLDDIILA 359
Query: 325 AIIFPIVWSI-RSLRETSKTDGKAARNLAKLTLFRQFY-------IVVIGYLYFTRIVVF 376
I VW I SL +T KT + +N K +L+R F + I ++ +T
Sbjct: 360 VIDSIFVWFIFISLAQTMKT-LRLRKNTVKFSLYRHFKNTLIFAVLASIVFMGWTTKTFR 418
Query: 377 ALKTIAAYKYQWVSNAAEELASLAFYIVIFYMFRPLETNEYF----VLDEEEEEAAE 429
K + + +WV +A IVI +++RP N+ + ++D+ ++E E
Sbjct: 419 IAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEE 475
>sp|Q8BKU8|TM87B_MOUSE Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1
Length = 555
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 28/284 (9%)
Query: 162 GSRDYLSAGLTQLPSLFFFFSVLYIGFFGIWIYICLTNKRSVHRIHLVMGILLIMKALNL 221
G Y+SA L + ++YI + +W+ + + RI + ++ + L
Sbjct: 205 GPHGYISASDWPLMIFYMVMCIVYILYGVLWLLWSACYWKDILRIQFWIAAVIFLGMLEK 264
Query: 222 ICAAEDKHYVKVTG-TPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKV 280
+ + TG + G + + ++ L +++++ G+ +KP L +V
Sbjct: 265 AVFYSEYQNINSTGLSTQGLLIFAELISAVKRTLARLLVIIVSLGYGIVKPRLGTVMHRV 324
Query: 281 LMIVIPLQVLANVASV--VIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPI-VWSI-RS 336
+ + + + A + V VIG + +L DI+ A+I I VW I S
Sbjct: 325 IGLGLLYLIFAAIEGVMRVIGGSKHL---------AVVLTDIVL--AVIDSIFVWFIFIS 373
Query: 337 LRETSKTDGKAARNLAKLTLFRQFYIVVI-GYLYFTRIVVFALKTIAAYKYQ------WV 389
L +T KT + +N K +L+R F +I L +V+ KT K Q WV
Sbjct: 374 LAQTMKT-LRLRKNTVKFSLYRHFTNTLIFAVLASIVFMVWTTKTFRIAKCQSDWMELWV 432
Query: 390 SNAAEELASLAFYIVIFYMFRPLETNEYF----VLDEEEEEAAE 429
+A IVI +++RP N+ + ++D+ ++E E
Sbjct: 433 DDAFWSFLFSVILIVIMFLWRPSANNQRYAFMPLIDDSDDEVEE 476
>sp|Q8NBN3|TM87A_HUMAN Transmembrane protein 87A OS=Homo sapiens GN=TMEM87A PE=1 SV=3
Length = 555
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 113/270 (41%), Gaps = 27/270 (10%)
Query: 162 GSRDYLSAGLTQLPSLFFFF--SVLYIGFFGIWIYICLTNKRSVHRIHLVMGILLIMKAL 219
G +YL+ L P + FF ++Y+ F +W+ R + RI +G ++ + L
Sbjct: 214 GPYEYLT--LEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGML 271
Query: 220 NLICAAEDKHYVKVTG-TPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREK 278
+ ++ G + G +L + ++ L T+++++ G+ +KP L
Sbjct: 272 EKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLH 331
Query: 279 KVLMIVIPLQVLANVASVVIGETGPFIKDWVTWNQVFL-LVDIICCCAIIFPIVWSIRSL 337
KV+ + L +L + V+ TG D + + L +D C I + +++ L
Sbjct: 332 KVV-VAGALYLLFSGMEGVLRVTGA-QTDLASLAFIPLAFLDTALCWWIFISLTQTMKLL 389
Query: 338 RETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTI---------AAYKYQW 388
K RN+ KL+L+R F +I L +VF + T + ++ W
Sbjct: 390 --------KLRRNIVKLSLYRHFTNTLI--LAVAASIVFIIWTTMKFRIVTCQSDWRELW 439
Query: 389 VSNAAEELASLAFYIVIFYMFRPLETNEYF 418
V +A L VI ++RP N+ F
Sbjct: 440 VDDAIWRLLFSMILFVIMVLWRPSANNQRF 469
>sp|Q28EW0|TM87A_XENTR Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2
SV=1
Length = 541
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 120/321 (37%), Gaps = 41/321 (12%)
Query: 136 LFFANCAPETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGFFGIWIYI 195
LF + V N+ V G ++SA L + ++YI +W
Sbjct: 175 LFVLQVKGDENVKWNLSVTV---SMKGPHGFISASDWPLMIFYMVMCIMYILLALLWFIW 231
Query: 196 CLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTG-TPHGWDVLFYIFQFIRVVL 254
+ + RI + ++ + L + TG + HG + + I+ L
Sbjct: 232 SACYWKDLLRIQFWIAAVIFLGMLEKAVYYAEYQNTDNTGVSSHGLLIFAELISSIKRTL 291
Query: 255 LFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPLQVLANVASV--VIGETGPFIKDWVTWN 312
++ ++ G+ +KP L +V+ + + V A V V +IG ++
Sbjct: 292 ARLLVTIVSLGYGIIKPRLGAVMHRVVGMGVLYFVFAAVEGVMRIIGAK--------EYD 343
Query: 313 QVFL------LVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIG 366
V L L+D C W SL +T KT K +N K +L+R F +I
Sbjct: 344 LVLLAGIPLALLDSGLCW-------WIFVSLAQTMKT-LKLRKNTVKYSLYRHFTNTLI- 394
Query: 367 YLYFTRIVVFALKTI--------AAYKYQWVSNAAEELASLAFYIVIFYMFRPLETNEYF 418
+ I+ +T A + WV +A +VI +++RP N+ +
Sbjct: 395 FAILASIIFMIWRTKKFQLVDCQADWMELWVDDAYWRFLFFIILLVIMFLWRPSANNQRY 454
Query: 419 ----VLDEEEEEAAEQALRDE 435
++D+ ++E E + D
Sbjct: 455 AFTPLIDDSDDEVEEFLVTDH 475
>sp|O74412|CBF12_SCHPO Transcription factor cbf12 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=cbf12 PE=2 SV=1
Length = 963
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 112 RELSPPPHSRFEQSYPV-----TAPNEYSLFFANCAPETQVSMNVKTEVYNLDRDGSRDY 166
E+ P P + FE +Y V + PN YS +N P S+N + NL ++GS +
Sbjct: 133 NEMHPYPPATFENNYSVLPDHSSQPNAYSFTGSNILPTQSPSLNQMQDYQNLQQNGSSNT 192
Query: 167 ----------LSAGLTQLP 175
LS GLT P
Sbjct: 193 TIPSFSSQHDLSQGLTHQP 211
>sp|Q9JKS6|PCLO_RAT Protein piccolo OS=Rattus norvegicus GN=Pclo PE=1 SV=1
Length = 5085
Score = 33.9 bits (76), Expect = 2.4, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 1 MAKIPLLLPLSVLLLSLLSLSTAEIKSLTITADSRPMILFE-KFGFTHPGHVTISVSSVS 59
MAK+P P S ++ S ++ K L+ TAD F+ GFT G T++ S
Sbjct: 3607 MAKVP---PASPKTAKMMQRSMSDPKPLSPTADESSRAPFQYSEGFTTKGSQTMTASGTQ 3663
Query: 60 VASSSAAPNPNPSRL 74
PNP P +
Sbjct: 3664 KKVKRTLPNPPPEEV 3678
>sp|Q8BXN9|TM87A_MOUSE Transmembrane protein 87A OS=Mus musculus GN=Tmem87a PE=1 SV=1
Length = 555
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 27/271 (9%)
Query: 162 GSRDYLSAGLTQLPSLFFFF--SVLYIGFFGIWIYICLTNKRSVHRIHLVMGILLIMKAL 219
G +YL+ L P + FF ++Y+ F +W+ R + RI +G ++ +
Sbjct: 214 GPYEYLT--LEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMF 271
Query: 220 NLICAAEDKHYVKVTG-TPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREK 278
+ ++ G + VL + ++ L T+++++ G+ +KP L
Sbjct: 272 EKAVFYAEFQNIRYKGESVQNALVLAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLH 331
Query: 279 KVLMIVIPLQVLANVASVVIGETGPFIKDWVTWNQVFL-LVDIICCCAIIFPIVWSIRSL 337
KV+ + L +L + V+ TG D + + L +D C I + +++ L
Sbjct: 332 KVV-VAGALYLLFSGMEGVLRVTGA-QTDLASLAFIPLAFLDTALCWWIFISLTQTMKLL 389
Query: 338 RETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTI---------AAYKYQW 388
K RN+ KL+L+R F +I L +VF + T + ++ W
Sbjct: 390 --------KLRRNIVKLSLYRHFTNTLI--LAVAASIVFIIWTTMKFRIVTCQSDWRELW 439
Query: 389 VSNAAEELASLAFYIVIFYMFRPLETNEYFV 419
V +A L VI ++RP N+ F
Sbjct: 440 VDDAIWRLLFSMILFVIMILWRPSANNQRFA 470
>sp|Q9C0Q1|YHJ4_SCHPO Uncharacterized transporter
PB10D8.04c/PB10D8.05c/PB10D8.06c/PB10D8.07c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBPB10D8.04c PE=3 SV=1
Length = 379
Score = 32.3 bits (72), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 20/90 (22%)
Query: 217 KALNLICAAEDKHYVKVTGTPHGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQER 276
+N++C + +P GW F+ ++ +F+V + T W L +R
Sbjct: 97 SCINMLCFLSSQS------SPQGW------INFLYILWIFSVAMSFFTAWVIFSTILTKR 144
Query: 277 EK--------KVLMIVIPLQVLANVASVVI 298
K +L+ ++PL V A+ SVVI
Sbjct: 145 AKIEFSTFLPTILLPIVPLTVAASTGSVVI 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,761,678
Number of Sequences: 539616
Number of extensions: 6022769
Number of successful extensions: 20861
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 20833
Number of HSP's gapped (non-prelim): 29
length of query: 439
length of database: 191,569,459
effective HSP length: 121
effective length of query: 318
effective length of database: 126,275,923
effective search space: 40155743514
effective search space used: 40155743514
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)