Query 013597
Match_columns 439
No_of_seqs 167 out of 197
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 13:33:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013597.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013597hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xzz_A Protein-glutamine gamma 96.8 0.0033 1.1E-07 52.0 7.2 73 334-414 11-83 (102)
2 1ex0_A Coagulation factor XIII 96.3 0.045 1.5E-06 59.4 14.0 226 154-413 451-706 (731)
3 1vjj_A Protein-glutamine gluta 96.2 0.25 8.4E-06 53.4 19.4 183 195-413 481-671 (692)
4 3hrz_B Cobra venom factor; ser 95.8 0.052 1.8E-06 51.7 10.9 86 321-413 75-163 (252)
5 3idu_A Uncharacterized protein 94.0 0.49 1.7E-05 40.3 10.8 81 323-414 14-94 (127)
6 1g0d_A Protein-glutamine gamma 93.3 0.16 5.6E-06 54.7 8.1 186 195-413 472-662 (695)
7 2q3z_A Transglutaminase 2; tra 92.7 0.16 5.4E-06 54.9 6.8 174 205-413 485-665 (687)
8 3es6_B Prolactin-inducible pro 90.0 0.76 2.6E-05 38.7 7.0 72 334-414 13-84 (118)
9 2qsv_A Uncharacterized protein 89.5 12 0.00041 34.2 15.5 128 93-229 11-156 (220)
10 4fxk_B Complement C4-A alpha c 89.4 0.52 1.8E-05 51.6 7.1 83 323-413 149-233 (767)
11 2ys4_A Hydrocephalus-inducing 89.0 2.2 7.6E-05 35.3 9.2 86 79-174 17-104 (122)
12 4acq_A Alpha-2-macroglobulin; 89.0 2.7 9.3E-05 49.4 13.0 84 322-413 763-848 (1451)
13 2hr0_B Complement C3 alpha' ch 88.6 1.3 4.6E-05 49.4 9.8 83 323-413 76-163 (915)
14 3prx_B Cobra venom factor; imm 88.3 2.1 7.1E-05 51.0 11.5 73 334-413 819-895 (1642)
15 2b39_A C3; thioester, immune d 86.6 2.2 7.5E-05 50.9 10.5 73 334-413 833-910 (1661)
16 2pn5_A TEP1R, thioester-contai 86.1 2.8 9.5E-05 48.7 10.8 73 334-412 671-749 (1325)
17 2xzz_A Protein-glutamine gamma 85.0 2.2 7.6E-05 34.8 6.7 73 95-173 14-86 (102)
18 2ys4_A Hydrocephalus-inducing 81.7 3.2 0.00011 34.4 6.6 69 339-419 37-105 (122)
19 1vjj_A Protein-glutamine gluta 80.6 3 0.0001 45.1 7.4 72 325-404 479-556 (692)
20 1ex0_A Coagulation factor XIII 80.0 2.7 9.3E-05 45.6 6.9 70 326-404 516-591 (731)
21 2l0d_A Cell surface protein; s 80.0 18 0.00061 30.0 10.5 77 327-413 4-81 (114)
22 3cu7_A Complement C5; Mg domai 78.2 2.3 8E-05 50.6 6.3 80 325-412 820-910 (1676)
23 1g0d_A Protein-glutamine gamma 77.1 4.1 0.00014 44.0 7.1 71 325-404 470-546 (695)
24 2e6j_A Hydin protein; PAPD, st 72.1 8.4 0.00029 30.8 6.4 71 93-172 18-92 (112)
25 3qbt_B Inositol polyphosphate 69.4 10 0.00036 32.3 6.6 73 93-172 35-123 (140)
26 2q3z_A Transglutaminase 2; tra 68.6 14 0.00047 39.9 8.7 74 93-173 593-669 (687)
27 3qbt_B Inositol polyphosphate 68.2 14 0.00048 31.5 7.2 83 339-426 39-129 (140)
28 2icn_B Prolactin-inducible pro 64.8 25 0.00087 29.3 7.9 66 334-406 13-78 (118)
29 2e6j_A Hydin protein; PAPD, st 63.6 21 0.00074 28.3 7.2 69 339-417 22-92 (112)
30 2r39_A FIXG-related protein; s 63.3 20 0.00068 29.4 7.0 69 325-404 8-83 (118)
31 3ugu_A S-arrestin; arrestin fo 61.0 16 0.00056 36.5 7.0 91 324-417 209-305 (380)
32 1m1s_A WR4; structural genomic 61.0 16 0.00056 30.3 6.0 50 346-405 26-75 (116)
33 1z9l_A Vesicle-associated memb 60.0 20 0.00068 29.8 6.5 53 343-405 27-79 (128)
34 1msp_A MSP, major sperm protei 59.1 19 0.00064 30.1 6.2 55 344-408 26-80 (126)
35 3idu_A Uncharacterized protein 58.7 64 0.0022 27.0 9.4 73 96-176 28-100 (127)
36 1row_A SSP-19, MSP-domain prot 57.9 20 0.00068 29.3 6.0 49 346-404 18-66 (109)
37 2g30_A AP-2 complex subunit be 57.2 28 0.00097 32.8 7.8 58 342-404 54-111 (258)
38 3ugu_A S-arrestin; arrestin fo 57.1 20 0.00069 35.8 6.9 29 97-125 224-252 (380)
39 3isy_A Bsupi, intracellular pr 56.3 73 0.0025 26.5 9.3 92 99-192 16-119 (120)
40 2l0d_A Cell surface protein; s 55.9 65 0.0022 26.5 8.8 72 97-175 15-87 (114)
41 1suj_A CONE arrestin; sensory 55.3 46 0.0016 33.4 9.3 82 324-408 190-277 (392)
42 2qsv_A Uncharacterized protein 53.2 72 0.0025 28.8 9.7 78 92-178 126-208 (220)
43 2r5o_A Putative ATP binding co 51.8 54 0.0018 28.9 8.4 93 336-436 63-167 (188)
44 2cri_A Vesicle-associated memb 51.5 26 0.00089 30.0 6.0 53 343-405 31-83 (147)
45 3isy_A Bsupi, intracellular pr 50.1 1.1E+02 0.0037 25.4 10.0 81 326-414 5-99 (120)
46 1suj_A CONE arrestin; sensory 50.1 28 0.00095 35.0 6.7 30 97-126 205-234 (392)
47 1wic_A Hypothetical protein ri 42.7 33 0.0011 29.6 5.3 53 344-406 36-88 (152)
48 1g4m_A Beta-arrestin1; sensory 40.0 76 0.0026 31.7 8.2 83 323-408 192-280 (393)
49 2kut_A Uncharacterized protein 37.9 21 0.00071 30.0 3.0 70 333-406 6-77 (122)
50 2d7p_A Filamin-C; beta-sandwic 36.2 66 0.0022 26.1 5.8 64 95-172 22-85 (112)
51 3hrz_B Cobra venom factor; ser 34.2 1.8E+02 0.0061 26.9 9.3 79 88-173 86-167 (252)
52 3qis_A Inositol polyphosphate 33.3 97 0.0033 30.4 7.6 83 339-426 42-132 (366)
53 1kyf_A Alpha-adaptin C; protei 27.9 1E+02 0.0035 28.6 6.3 77 97-177 38-117 (247)
54 3hs8_A Adaptor protein complex 25.6 69 0.0024 30.4 4.7 76 97-176 64-142 (273)
55 4ep8_B Urease subunit beta; al 24.3 2.7E+02 0.0093 22.4 7.2 50 346-400 21-81 (101)
56 3qis_A Inositol polyphosphate 23.3 1.4E+02 0.0049 29.2 6.8 63 93-162 38-105 (366)
57 2co7_B SAFB chaperone, putativ 22.1 1.9E+02 0.0065 26.3 6.9 49 347-400 30-78 (221)
58 3es6_B Prolactin-inducible pro 22.0 3.3E+02 0.011 22.3 8.2 77 87-173 11-87 (118)
59 1row_A SSP-19, MSP-domain prot 21.6 2.6E+02 0.0088 22.5 6.9 59 104-171 18-77 (109)
60 4ubp_B Protein (urease (chain 21.1 60 0.0021 27.2 2.9 61 346-414 27-98 (126)
61 4ac7_B Urease subunit beta; hy 21.1 60 0.0021 27.2 2.9 61 346-414 27-98 (126)
62 2kut_A Uncharacterized protein 20.6 87 0.003 26.1 3.8 78 96-175 11-95 (122)
No 1
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=96.78 E-value=0.0033 Score=51.98 Aligned_cols=73 Identities=5% Similarity=0.138 Sum_probs=61.0
Q ss_pred ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597 334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT 413 (439)
Q Consensus 334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is 413 (439)
+++...++++|+.+++.++|--...+....+.++... + ..+ ....++.+.||++..+.+.+.|..+|.++|-
T Consensus 11 ~v~g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~G------L-~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~ 82 (102)
T 2xzz_A 11 TLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSG------L-QRP-KILNVGDIGGNETVTLRQSFVPVRPGPRQLI 82 (102)
T ss_dssp EESSCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETT------T-EEE-EEEEECCBCTTCEEEEEEEECCCSCSSCCCE
T ss_pred EECCCcccCCeEEEEEEEECCCCCcccCEEEEEECCC------C-Ccc-eEEEcCcCCCCCEEEEEEEEecCcccceEEE
Confidence 5667778999999999999997777777889998764 2 344 5567899999999999999999999998874
Q ss_pred c
Q 013597 414 G 414 (439)
Q Consensus 414 g 414 (439)
.
T Consensus 83 a 83 (102)
T 2xzz_A 83 A 83 (102)
T ss_dssp E
T ss_pred E
Confidence 3
No 2
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=96.25 E-value=0.045 Score=59.37 Aligned_cols=226 Identities=11% Similarity=0.054 Sum_probs=126.2
Q ss_pred EEEEEEccccCceEEEEEE----------EEEcCCC---ceeeeceEEEE----------Ee--ecCeEEEEEEE--EeC
Q 013597 154 FIVEHDVKELGAHTLVCTA----------LYSDGEG---ERKYLPQFFKF----------IV--SNPLSVRTKVR--VVK 206 (439)
Q Consensus 154 ~iv~~~lke~G~h~L~c~V----------sY~~~~G---e~~~frK~fkF----------~v--~~Pl~VktK~~--~~~ 206 (439)
..++.+-+.+|..|..=+| .|.-+.| |+..|.|..++ .- ..++.++-|.- .++
T Consensus 451 ~~~~~~t~~VG~~ISTKaVG~d~ReDIT~~YKypEGS~eER~~~~kA~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~iG 530 (731)
T 1ex0_A 451 VVENVDATHIGKLIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTSRSMKSRSNVDMDFEVENAVLG 530 (731)
T ss_dssp EEEEEECSSTTCEEEEECSSSSCEEECHHHHCCCTTSHHHHHHHHHHHTTTCBCCSCCCCC-----CEEEEEEECCCBTT
T ss_pred EEEeeccccccceEeccCCCCCCcccccccCcCCCCCHHHHHHHHHHHhhcccccccccccccCCCCeEEEEecCCCCCC
Confidence 3567777888888877666 5555554 22333222221 00 12344444441 135
Q ss_pred CceEEEEEEEecccccEEEEeEEeeecC-CceeeeecCCCCCCCCCCcccccc-CCceEEeCCCCeeeEEEEEeecCCCC
Q 013597 207 EITFLEACIENHTKSNLYMDQVEFEPSQ-NWSATMLKADGPHSDYNAQSREIF-KPPVLIRSGGGIHNYLYQLKMLSHGS 284 (439)
Q Consensus 207 ~~~~LEaqiqN~s~~~l~le~v~Lep~~-~~~~~~ln~~~~~~~~~~~~~~~~-~~~~l~~~~gd~~q~lf~l~~~~~~~ 284 (439)
+++-|.+.+.|.|...-.+ ++.|.... -|+-.. .. .+. ..-.+.++|++....-..|....-..
T Consensus 531 ~df~v~l~~~N~s~~~~~v-~~~l~a~~v~YtG~~----------~~---~~~~~~~~~~L~p~~~~~i~~~i~y~~Y~~ 596 (731)
T 1ex0_A 531 KDFKLSITFRNNSHNRYTI-TAYLSANITFYTGVP----------KA---EFKKETFDVTLEPLSFKKEAVLIQAGEYMG 596 (731)
T ss_dssp CCEEEEEEEEECSSSCEEE-EEEEEEEEECTTSCE----------EE---EEEEEEEEEEECTTEEEEEEEEECHHHHTT
T ss_pred CCEEEEEEEEECCCCCEEE-EEEEEEEEEeeCCcc----------cc---ceeEeeEEEEECCCceEEEEEEECHHHHhh
Confidence 7899999999999876321 22222111 111100 00 011 11234566777777766666654321
Q ss_pred CCCccccCceeeEEEEEEEEcCCCCCceeeEEEEeee-cCccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEE
Q 013597 285 SSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGT-TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFE 363 (439)
Q Consensus 285 ~~~~~~~g~~~lGkL~I~WRs~~Ge~G~LqTs~l~~~-~p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~ 363 (439)
....+.... -.-+..-...++.-.- ++. .....+|.|.+ |...++++|+.+++.++|--+.++..-.
T Consensus 597 --~L~d~~~i~--~~a~~~v~et~~~~~~-----~~di~l~~P~l~I~v---~g~~~v~~~l~v~vsf~NPL~~~L~~c~ 664 (731)
T 1ex0_A 597 --QLLEQASLH--FFVTARINETRDVLAK-----QKSTVLTIPEIIIKV---RGTQVVGSDMTVTVQFTNPLKETLRNVW 664 (731)
T ss_dssp --TCCTTCEEE--EEEEEEETTTCCEEEE-----EEEEECBCCCCEEEE---EECCBTTSCEEEEEEEECCSSSCEEEEE
T ss_pred --hccCCCEEE--EEEEEEECCCCeEEEE-----EEEEEEeCCCEEEEe---CCCcccCCeEEEEEEEECCCCCcccceE
Confidence 111111111 1122222322221111 111 23344565554 4556799999999999999777777688
Q ss_pred EEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597 364 IWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT 413 (439)
Q Consensus 364 l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is 413 (439)
+.++... + ..+ ..+.++.|.||++..+.+.+.|..+|.++|-
T Consensus 665 ~~vEG~G------L-~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~ 706 (731)
T 1ex0_A 665 VHLDGPG------V-TRP-MKKMFREIRPNSTVQWEEVCRPWVSGHRKLI 706 (731)
T ss_dssp EEEEETT------T-EEE-EEEEEEEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred EEEECCC------C-Cce-eeEecCccCCCCEEEEEEEEEeccccceEEE
Confidence 8888764 2 233 5577899999999999999999999999974
No 3
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=96.22 E-value=0.25 Score=53.41 Aligned_cols=183 Identities=11% Similarity=0.179 Sum_probs=108.0
Q ss_pred CeEEEEEEE---EeCCceEEEEEEEecccccEEEEeEEeeecC---CceeeeecCCCCCCCCCCcccccc-CCceEEeCC
Q 013597 195 PLSVRTKVR---VVKEITFLEACIENHTKSNLYMDQVEFEPSQ---NWSATMLKADGPHSDYNAQSREIF-KPPVLIRSG 267 (439)
Q Consensus 195 Pl~VktK~~---~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~---~~~~~~ln~~~~~~~~~~~~~~~~-~~~~l~~~~ 267 (439)
++.++-|.. .+++++-|.+.+.|.|+..- .+.+.... -|+-.. . ..+. ..-.+.++|
T Consensus 481 ~v~~~~~~~~~~~~G~df~v~l~~~N~s~~~~---~v~~~l~a~~v~YtG~~----------~---~~~~~~~~~v~L~p 544 (692)
T 1vjj_A 481 SIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTK---TVTVNMTAWTIIYNGTL----------V---HEVWKDSATMSLDP 544 (692)
T ss_dssp SEEEEEEECSCCBTTSCEEEEEEEEECSSSCE---EEEEEEEEEEECTTCCE----------E---EEEEEEEEEEEECT
T ss_pred CeEEEEEcCCCCCCCCCEEEEEEEEECCCCCE---EEEEEEEEEEEeeCCcc----------c---cceEEeeEEEEECC
Confidence 344544432 24678999999999998763 23332111 111110 0 0011 112345677
Q ss_pred CCeeeEEEEEeecCCCCCCCccccCceeeEEE-EEEEEcCCCCCceeeEEEEeeecCccCCeEEEEEecCceeEeCCcEE
Q 013597 268 GGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL-QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFL 346 (439)
Q Consensus 268 gd~~q~lf~l~~~~~~~~~~~~~~g~~~lGkL-~I~WRs~~Ge~G~LqTs~l~~~~p~~~dl~l~v~~~P~~v~l~~pF~ 346 (439)
++....-..|....-.. ....+... ++ -+..-...++ .+.---+. ....+|.| ++|...++++|+.
T Consensus 545 ~~~~~i~~~i~y~~Y~~--~L~d~~~i---~~~a~~~v~et~~--~~~~~di~---l~~P~l~I---~v~g~~~v~~~l~ 611 (692)
T 1vjj_A 545 EEEAEHPIKISYAQYER--YLKSDNMI---RITAVCKVPDESE--VVVERDII---LDNPTLTL---EVLNEARVRKPVN 611 (692)
T ss_dssp TCEEEEEEEECHHHHHT--TCCTTCEE---EEEEEEECTTSCC--EEEEEEEE---CBCCCEEE---EECSCCBTTSCEE
T ss_pred CceEEEEEEECHHHHhh--hcccCCeE---EEEEEEEECCCce--EEEEEEEE---EcCCCEEE---EeCCCcccCCeEE
Confidence 77777766666653211 11111111 22 2233333333 22212222 23334544 4667778999999
Q ss_pred EEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597 347 LKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT 413 (439)
Q Consensus 347 v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is 413 (439)
+++.++|--+.++....+.++... +..+...+.++.|.||++..+.+.+.|..+|.++|-
T Consensus 612 v~v~f~NPL~~~L~~c~~~vEG~G-------L~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~ 671 (692)
T 1vjj_A 612 VQMLFSNPLDEPVRDCVLMVEGSG-------LLLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQLL 671 (692)
T ss_dssp EEEEEECCSSSCBCSEEEEEECTT-------TSSSCEEEEECCBCTTCEEEEEEEECCCSCEEEEEE
T ss_pred EEEEEECCCCCcccceEEEEECCC-------CCCCceEEEcCccCCCCEEEEEEEEEeccccceEEE
Confidence 999999997777776888887764 123555667899999999999999999999999974
No 4
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=95.82 E-value=0.052 Score=51.70 Aligned_cols=86 Identities=13% Similarity=0.174 Sum_probs=66.3
Q ss_pred ecCccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc---ceeecccCCCCeeE
Q 013597 321 TTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR---IMALAPVEAFGSTD 397 (439)
Q Consensus 321 ~~p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s---~~~Lg~L~P~~s~~ 397 (439)
.....+++-+.+ ++|-.++-++-|.+.+.|.|+.+..+. +.+.|..++ ++...+.. ..+--.|.++++..
T Consensus 75 ~i~v~kpffv~~-~LP~sv~rGE~~~l~~~V~Ny~~~~~~-v~V~l~~~~-----~~~~~~~~~~~~~~~v~v~a~~~~~ 147 (252)
T 3hrz_B 75 EIRVMKVFFIDL-QMPYSVVKNEQVEIRAILHNYVNEDIY-VRVELLYNP-----AFCSASTKGQRYRQQFPIKALSSRA 147 (252)
T ss_dssp EEEBCCSEEEEE-CCCSCEETTCCEEEEEEEEECSSSCEE-EEEEECCCT-----TEEESCCSSCCEEEEEEECTTEEEE
T ss_pred eEEEECCEEEEc-CCCcEEeeCCEEEEEEEEEcccCceEE-EEEEEEcCC-----ceEeecCCCCceEEEEEECCCCeEE
Confidence 345566775554 899999999999999999999998887 778887653 56665432 11222689999999
Q ss_pred EEEEEEecccceEEeC
Q 013597 398 FHLNLIATKLGVQRIT 413 (439)
Q Consensus 398 ~~L~l~pl~~Glq~is 413 (439)
+.|.+.|...|.+.|.
T Consensus 148 v~f~i~p~~~G~~~i~ 163 (252)
T 3hrz_B 148 VPFVIVPLEQGLHDVE 163 (252)
T ss_dssp EEEEEEECSSEEEEEE
T ss_pred EEEEEEeccCCcEEEE
Confidence 9999999999988764
No 5
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=94.01 E-value=0.49 Score=40.32 Aligned_cols=81 Identities=15% Similarity=0.206 Sum_probs=60.8
Q ss_pred CccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEE
Q 013597 323 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNL 402 (439)
Q Consensus 323 p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l 402 (439)
....||.+.+ ..|+.+..+++.+++++|+|.-......+.|.+--+. - ..+.. .. .|.||++.++.++.
T Consensus 14 ~~~pDL~V~i-s~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvng------~-~v~t~--~v-~La~G~s~tv~f~~ 82 (127)
T 3idu_A 14 FEFPDLTVEI-KGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYING------T-LYKNW--TV-SLGPKEEKVLTFNW 82 (127)
T ss_dssp CSSCCEEEEE-ESCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEETT------E-EEEEE--EE-EECTTCEEEEEEEE
T ss_pred ccCCCeEEEe-cCCCcccCCCEEEEEEEEEECCCCccCCcEEEEEECC------E-EEeeE--Ee-ccCCCCeEEEEEEE
Confidence 5577887755 5799999999999999999996655555777765543 1 22322 23 38999999999999
Q ss_pred EecccceEEeCc
Q 013597 403 IATKLGVQRITG 414 (439)
Q Consensus 403 ~pl~~Glq~isg 414 (439)
-|...|-+.|..
T Consensus 83 ~~~~~G~~~v~A 94 (127)
T 3idu_A 83 TPTQEGMYRINA 94 (127)
T ss_dssp CCSSCEEEEEEE
T ss_pred EcCCCcEEEEEE
Confidence 998888777654
No 6
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=93.34 E-value=0.16 Score=54.71 Aligned_cols=186 Identities=12% Similarity=0.098 Sum_probs=105.7
Q ss_pred CeEEEEEEE--EeCCceEEEEEEEecccccEEEEeEEeeecCCceeeeecCCCCCCCCCCcccccc-CCceEEeCCCCee
Q 013597 195 PLSVRTKVR--VVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIF-KPPVLIRSGGGIH 271 (439)
Q Consensus 195 Pl~VktK~~--~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~~ln~~~~~~~~~~~~~~~~-~~~~l~~~~gd~~ 271 (439)
++.++-|.. .+++++-|.+.+.|.|+..- .+.+... +..+--.+.. .. .+. ..-.+.++|++..
T Consensus 472 ~v~~~i~~~~~~~G~df~v~v~~~N~s~~~~---~v~~~l~----a~~v~YtG~~---~~---~~~~~~~~~~L~p~~~~ 538 (695)
T 1g0d_A 472 RLQLSIKHAQPVFGTDFDVIVEVKNEGGRDA---HAQLTML----AMAVTYNSLR---RG---ECQRKTISVTVPAHKAH 538 (695)
T ss_dssp CEEEEEEECCCBTTCCEEEEEEEEECSSSCE---EEEEEEE----EEEECTTCBC---CC---CCCEEEEEEEECTTEEE
T ss_pred CeEEEEEeCCCCCCCCEEEEEEEEECCCCCE---EEEEEEE----EEEEeeCCcc---cC---ceeEeeEEEEECCCceE
Confidence 445554431 15778999999999998763 2333211 1111000000 00 011 1123456777777
Q ss_pred eEEEEEeecCCCCCCCccccCceeeEEEEEEEEcCCCCCceeeEEEEeee-cCccCCeEEEEEecCceeEeCCcEEEEEE
Q 013597 272 NYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGT-TITSKEIELNVVEVPSVVGIDKPFLLKLK 350 (439)
Q Consensus 272 q~lf~l~~~~~~~~~~~~~~g~~~lGkL~I~WRs~~Ge~G~LqTs~l~~~-~p~~~dl~l~v~~~P~~v~l~~pF~v~~~ 350 (439)
..-..|....-.. + ...+... ++... ..-.|.+.--.. ++. .....+|.| ++|...++++|+.+++.
T Consensus 539 ~v~~~i~y~~Y~~-~-L~d~~~i---~~~a~--~~v~et~~~~~~--~~di~l~~P~l~I---~v~g~~~v~~~l~a~vs 606 (695)
T 1g0d_A 539 KEVMRLHYDDYVR-C-VSEHHLI---RVKAL--LDAPGENGPIMT--VANIPLSTPELLV---QVPGKAVVWEPLTAYVS 606 (695)
T ss_dssp EEEEEECHHHHTT-T-CCTTCEE---EEEEE--EECCC---EEEE--EEEEECBCCCCEE---ECCSCEETTCCEEEEEE
T ss_pred EEEEEECHHHHhh-h-cccCCeE---EEEEE--EEECCCCeEEEE--EEEEEEcCCCEEE---EeCCCcccCCeEEEEEE
Confidence 7766666653321 1 1111111 11100 111122221111 111 233444544 57888899999999999
Q ss_pred EEeCCCCCcccEEEEEEeCCCCCcceEEEecccceee-cccCCCCeeEEEEEEEecccceEEeC
Q 013597 351 LTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMAL-APVEAFGSTDFHLNLIATKLGVQRIT 413 (439)
Q Consensus 351 v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~L-g~L~P~~s~~~~L~l~pl~~Glq~is 413 (439)
++|--..++....+.++... + ..+ ....+ +.|.||++..+.+.+.|..+|.++|-
T Consensus 607 f~NPL~~~L~~c~~~vEG~G------L-~~~-~~~~~~~~v~Pg~~~~~~~~~~P~~~G~r~L~ 662 (695)
T 1g0d_A 607 FTNPLPVPLKGGVFTLEGAG------L-LSA-TQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLL 662 (695)
T ss_dssp EECCSSSCEESCEEEEEETT------T-EEE-EEEECSSEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred EECCCCCcccceEEEEECCC------C-Ccc-eEEecCCCcCCCCEEEEEEEEEcCCccceEEE
Confidence 99997777766888888764 2 233 45667 89999999999999999999999974
No 7
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=92.69 E-value=0.16 Score=54.94 Aligned_cols=174 Identities=9% Similarity=0.041 Sum_probs=101.3
Q ss_pred eCCceEEEEEEEecccccEEEEeEEeeecC---CceeeeecCCCCCCCCCCccccc-c-CCceEEeCCCCeeeEEEEEee
Q 013597 205 VKEITFLEACIENHTKSNLYMDQVEFEPSQ---NWSATMLKADGPHSDYNAQSREI-F-KPPVLIRSGGGIHNYLYQLKM 279 (439)
Q Consensus 205 ~~~~~~LEaqiqN~s~~~l~le~v~Lep~~---~~~~~~ln~~~~~~~~~~~~~~~-~-~~~~l~~~~gd~~q~lf~l~~ 279 (439)
+++++-|.+.+.|.|+..- .+.+.... -|+-.. . ..+ + ..-.+-++|++....-..|..
T Consensus 485 ~G~df~v~v~~~N~s~~~~---~v~~~l~a~~v~YtG~~----------~---~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 485 MGSDFDVFAHITNNTAEEY---VCRLLLCARTVSYNGIL----------G---PECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp TTCCEEEEEEEEECSSSCE---EEEEEEEEEEECTTCCE----------E---EEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CCCCEEEEEEEEECCCCCE---EEEEEEEEEEEeeCCcc----------c---ceEeeeeeeEEEECCCceEEEEEEECH
Confidence 3678999999999997763 23332111 111110 0 011 1 111345667777777666666
Q ss_pred cCCCCCCCccccCceeeEEEEEEEEcCCCCCceeeEEEEeee-cCccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCC
Q 013597 280 LSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGT-TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKE 358 (439)
Q Consensus 280 ~~~~~~~~~~~~g~~~lGkL~I~WRs~~Ge~G~LqTs~l~~~-~p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~ 358 (439)
..-.. ....+....+ .-+.+-. |.+.--.. ++. .....+|.|. +|...++++|+.+++.++|--+.+
T Consensus 549 ~~Y~~--~L~d~~~i~~--~a~~~v~---et~~~~~~--~~di~l~~P~l~I~---v~g~~~v~~~~~v~v~f~NPL~~~ 616 (687)
T 2q3z_A 549 EKYRD--CLTESNLIKV--RALLVEP---VINSYLLA--ERDLYLENPEIKIR---ILGEPKQKRKLVAEVSLQNPLPVA 616 (687)
T ss_dssp HHHTT--TCCTTCEEEE--EEEEEET---TTTEEEEE--EEEEECBCCCCEEE---EESCCSSSSCEEEEEEEECCSSSC
T ss_pred HHHhh--hccCCCEEEE--EEEEEEC---CCCeEEEE--EEEEEEeCCCEEEE---eCCCcccCCeEEEEEEEECCCCCc
Confidence 54321 1111111111 1222222 22221111 111 2334455554 455667899999999999997777
Q ss_pred cccEEEEEEeCCCCCcceEEEecccceee-cccCCCCeeEEEEEEEecccceEEeC
Q 013597 359 QGPFEIWLSQNDSDEEKVVMINGLRIMAL-APVEAFGSTDFHLNLIATKLGVQRIT 413 (439)
Q Consensus 359 ~~~l~l~l~~~~~~~~~~~~~~G~s~~~L-g~L~P~~s~~~~L~l~pl~~Glq~is 413 (439)
+..-.+.++... +..+...+.+ +.|.||++..+.+.+.|..+|.++|-
T Consensus 617 L~~c~~~vEG~G-------L~~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~ 665 (687)
T 2q3z_A 617 LEGCTFTVEGAG-------LTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLV 665 (687)
T ss_dssp BCSEEEEEECTT-------TCSSCEEEEECSCBCTTCEEEEEEEECCCSSSCEEEE
T ss_pred ccceEEEEECCC-------CCCCceEEecCCCcCCCCEEEEEEEEEeccccceEEE
Confidence 776888887764 1233345567 89999999999999999999999974
No 8
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=90.02 E-value=0.76 Score=38.66 Aligned_cols=72 Identities=10% Similarity=0.025 Sum_probs=52.9
Q ss_pred ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597 334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT 413 (439)
Q Consensus 334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is 413 (439)
++|-++.-++-|.++..|.|+-+..|. +.+.|..+. .|......... .-|-++...+|.|.+.|+ |-..|.
T Consensus 13 ~lPysv~rgE~~~~~~~V~nyl~~~~~-v~v~L~~s~-----~~~~~~~~~~t-~Clc~~~~~t~~W~i~~l--g~vniT 83 (118)
T 3es6_B 13 DIPKSVRPNDEVTAVLAVQTELKECMV-VKTYLISSI-----PLQGAFNYKYT-ACLCDDNPKTFYWDFYTN--RTVQIA 83 (118)
T ss_dssp CCCSEECSSCCEEEEEEEEECCSSCEE-EEEEEEESS-----CCCSGGGCEEE-EEECSSSCEEEEEEECCS--SCEEEE
T ss_pred eCCceEecCCEEEEEEEEEecccceEE-EEEEecCCc-----CEEccCCCccc-EEecCCCceEEEEEEEeC--CeEEEE
Confidence 789999999999999999999888888 888887764 22111111111 147889999999999885 655544
Q ss_pred c
Q 013597 414 G 414 (439)
Q Consensus 414 g 414 (439)
.
T Consensus 84 v 84 (118)
T 3es6_B 84 A 84 (118)
T ss_dssp E
T ss_pred E
Confidence 3
No 9
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=89.54 E-value=12 Score=34.21 Aligned_cols=128 Identities=13% Similarity=0.095 Sum_probs=82.2
Q ss_pred cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEcccc---CceEEE
Q 013597 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKEL---GAHTLV 169 (439)
Q Consensus 93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~---G~h~L~ 169 (439)
.||.+-.|+.=...+.+.|..+.+++=..++ .++- ... . .....|+||++-+..+.|+-+.. |.+.=.
T Consensus 11 dFg~v~~g~~~~~~~~i~N~g~~pl~i~~~~----~p~~-~~~-~---~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~ 81 (220)
T 2qsv_A 11 LFPISMPEDEGVVRLVVNNTDESDLQVAVVS----LPSF-VSL-D---DRAFRLQAREPRELNLSLAVPRNMPPGMKDEP 81 (220)
T ss_dssp ECCSBCTTCCCEEEEEEEECSSSCEEEEEEE----CCTT-EEC-S---CCEEEECSSSCEEEEEEECCCTTCCSEEEEEE
T ss_pred EcccccCCCcceEEEEEEeCCCCceEEEecc----CCCc-eEe-e---eCcceeCCCCceEEEEEEcchhcccCCceeeE
Confidence 6999999999999999999999987655443 2221 111 1 12357999999999999999886 655555
Q ss_pred EEEEEEcC-CCceeeeceEEEEEeec-----------CeEEE--EEEEEe-CCceEEEEEEEecccccEEEEeEE
Q 013597 170 CTALYSDG-EGERKYLPQFFKFIVSN-----------PLSVR--TKVRVV-KEITFLEACIENHTKSNLYMDQVE 229 (439)
Q Consensus 170 c~VsY~~~-~Ge~~~frK~fkF~v~~-----------Pl~Vk--tK~~~~-~~~~~LEaqiqN~s~~~l~le~v~ 229 (439)
++|...++ +++...-+=..+-.+.. -+.+. ..|..+ ++..--+..+.|++..||.|.++.
T Consensus 82 i~v~~~~~~~~~~~~~~i~v~g~v~p~~~~~~~~~~~~i~~~~~~dfG~i~g~~~~~~f~i~N~G~~pL~I~~v~ 156 (220)
T 2qsv_A 82 LVLEVTSPETGKKAVDSVMVSLPLVDNFPALTAAQTGVMELSTYLDMGQLDGETTKAAIEIRNVGAGPLRLHSVT 156 (220)
T ss_dssp EEEEEECTTTCCEEEEEEEEEEEECCCGGGCCGGGCCCEECCCEEEEEECTTSCEEEEEEEEECSSSCEEEEEEE
T ss_pred EEEEEEcCCCCcccccEEEEEEEEcccchhhhhccCCEEEEEeEEeeeccCCCeEEEEEEEEECCCCCEEEEEEE
Confidence 66666542 22211111112222221 13333 123333 355667899999999999999885
No 10
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=89.41 E-value=0.52 Score=51.56 Aligned_cols=83 Identities=17% Similarity=0.166 Sum_probs=64.7
Q ss_pred CccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc--ceeecccCCCCeeEEEE
Q 013597 323 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR--IMALAPVEAFGSTDFHL 400 (439)
Q Consensus 323 p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s--~~~Lg~L~P~~s~~~~L 400 (439)
...+++-+. .++|-+++.++-|.+.+.|.|+++..+. +.|.|+..+ ++...+.. ...+ .|+++++..+.|
T Consensus 149 ~v~kpf~v~-~~lP~~v~~GD~~~i~~~V~N~~~~~~~-v~v~l~~~~-----~~~~~~~~~~~~~~-~v~a~~~~~v~f 220 (767)
T 4fxk_B 149 RVFREFHLH-LRLPMSVRRFEQLELRPVLYNYLDKNLT-VSVHVSPVE-----GLCLAGGGGLAQQV-LVPAGSARPVAF 220 (767)
T ss_dssp ECCCSEEEE-CCCCSCEETTCEEEECCEEEECSSSCEE-EEEEECCCT-----TEECSSSSCCCEEE-EECSSCEEECCE
T ss_pred EEeccEEEe-cCCCCeeccCCEEEEEEEEEECCCCCEE-EEEEEEecC-----CeEEecCCceeEEE-EEcCCCeEEEEE
Confidence 345566443 3899999999999999999999998887 888887654 55554432 2333 589999999999
Q ss_pred EEEecccceEEeC
Q 013597 401 NLIATKLGVQRIT 413 (439)
Q Consensus 401 ~l~pl~~Glq~is 413 (439)
.+.|...|.+.|.
T Consensus 221 ~i~~~~~G~~~i~ 233 (767)
T 4fxk_B 221 SVVPTAAAAVSLK 233 (767)
T ss_dssp EEEECSCSEEEEE
T ss_pred EEEECccCcEEEE
Confidence 9999999998874
No 11
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.97 E-value=2.2 Score=35.35 Aligned_cols=86 Identities=15% Similarity=0.244 Sum_probs=64.7
Q ss_pred CCccCCCccccccc--cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEE
Q 013597 79 ADSIGLSGLLVLPQ--AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIV 156 (439)
Q Consensus 79 ~~~~~~~~~L~LP~--sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv 156 (439)
..+.+.-+.|.+|+ .||..-+|++=...|.+.|.+..+++ ++ +..++ .+.... ..+.|.||+..+..|
T Consensus 17 l~a~~~~~~l~~p~~l~fg~~~v~~~~~~~~~l~N~g~~~~~---f~--~~~~~-~F~i~P----~~g~L~pg~~~~i~V 86 (122)
T 2ys4_A 17 IKARGARAILDFPDKLNFSTCPVKYSTQKILLVRNIGNKNAV---FH--IKTCR-PFSIEP----AIGTLNVGESMQLEV 86 (122)
T ss_dssp SCCCSCCCCCCCCSEECCCSEESSSCEEEEEEEECCSSSCEE---EE--EECCT-TEEEES----SEEEECTTCEEEEEE
T ss_pred EEEEcCCcEECCCCeeecCCeecCCeEEEEEEEEECCCCCEE---EE--EecCC-CeEEEC----CcCEECCCCEEEEEE
Confidence 44556667788885 89999999999999999999887654 22 33322 333322 246899999999999
Q ss_pred EEEccccCceEEEEEEEE
Q 013597 157 EHDVKELGAHTLVCTALY 174 (439)
Q Consensus 157 ~~~lke~G~h~L~c~VsY 174 (439)
.|.=++.|.|.-...+.|
T Consensus 87 ~F~P~~~g~~~~~l~v~~ 104 (122)
T 2ys4_A 87 EFEPQSVGDHSGRLIVCY 104 (122)
T ss_dssp EECCSSSBCCCCBCEEEE
T ss_pred EEEcCCCccEEEEEEEEE
Confidence 999999999976666666
No 12
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=88.97 E-value=2.7 Score=49.43 Aligned_cols=84 Identities=15% Similarity=0.105 Sum_probs=65.1
Q ss_pred cCccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc--ceeecccCCCCeeEEE
Q 013597 322 TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR--IMALAPVEAFGSTDFH 399 (439)
Q Consensus 322 ~p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s--~~~Lg~L~P~~s~~~~ 399 (439)
....+++-+. .++|-.+.-++-|.+.+.|.|+.+..+. +.|.|..++ ++.+.+.. ...+ .|.++++..+.
T Consensus 763 v~v~kpf~v~-~~LP~sv~rGE~~~l~~~V~N~~~~~~~-v~V~l~~~~-----~~~~~~~~~~~~~v-~l~~~~~~~v~ 834 (1451)
T 4acq_A 763 LRAFQPFFVE-LTMPYSVIRGEAFTLKATVLNYLPKCIR-VSVQLEASP-----AFLAVPVEKEQAPH-CICANGRQTVS 834 (1451)
T ss_dssp ECCBCSEEEE-EECCSEEESSSCEEEEEEEEECSSSCEE-EEEEECCCT-----TEEEEESCSCCCCE-EECTTEEEEEE
T ss_pred EEEECCEEEE-ccCCceEecCCEEEEEEEEEeccCccEE-EEEEEEcCC-----CeEeecCCCCceEE-EECCCCeEEEE
Confidence 4455666444 3899999999999999999999998877 777776653 56665432 2333 57999999999
Q ss_pred EEEEecccceEEeC
Q 013597 400 LNLIATKLGVQRIT 413 (439)
Q Consensus 400 L~l~pl~~Glq~is 413 (439)
|.+.|...|.+.|.
T Consensus 835 f~v~p~~~G~~~i~ 848 (1451)
T 4acq_A 835 WAVTPKSLGNVNFT 848 (1451)
T ss_dssp EEEEECSCEEEEEE
T ss_pred EEEEECccceEEEE
Confidence 99999999987764
No 13
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=88.61 E-value=1.3 Score=49.43 Aligned_cols=83 Identities=13% Similarity=0.163 Sum_probs=63.8
Q ss_pred CccCCeEEEEEecCceeEeCCcEEEEEEEEeCCC-CCcccEEEEEEeCCCCCcceEEEecc----cceeecccCCCCeeE
Q 013597 323 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD-KEQGPFEIWLSQNDSDEEKVVMINGL----RIMALAPVEAFGSTD 397 (439)
Q Consensus 323 p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~-r~~~~l~l~l~~~~~~~~~~~~~~G~----s~~~Lg~L~P~~s~~ 397 (439)
...+++-+. .++|-+++.++-|.+.+.|.|+++ ..+. +.|.|..++ ++...|. ....+ .|.++++..
T Consensus 76 ~v~kp~~v~-~~LP~~v~~GD~~~i~~~v~N~~~~~~~~-v~v~l~~~~-----~~~~~~~~~~~~~~~v-~l~~~~~~~ 147 (915)
T 2hr0_B 76 TVMQDFFID-LRLPYSVVRNEQVEIRAVLYNYRQNQELK-VRVELLHNP-----AFCSLATTKRRHQQTV-TIPPKSSLS 147 (915)
T ss_dssp EECCSSEEE-EECCSEEETTCCEEEEEEEEECCSSCCEE-EEEEECCCT-----TEECSCCSSSCEEEEE-EECTTEEEE
T ss_pred EEeccEEEE-ccCCCEEecCcEEEEEEEEEcCCCCeeEE-EEEEEecCC-----ceEeecCCCCcceeEE-EECCCCeEE
Confidence 345555443 389999999999999999999999 8877 777776643 4655542 12334 679999999
Q ss_pred EEEEEEecccceEEeC
Q 013597 398 FHLNLIATKLGVQRIT 413 (439)
Q Consensus 398 ~~L~l~pl~~Glq~is 413 (439)
+.|.+.|...|.+.|.
T Consensus 148 v~f~i~~~~~G~~~i~ 163 (915)
T 2hr0_B 148 VPYVIVPLKTGLQEVE 163 (915)
T ss_dssp EEEEEEECSCEEEEEE
T ss_pred EEEEEEECccceEEEE
Confidence 9999999999988763
No 14
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=88.34 E-value=2.1 Score=51.02 Aligned_cols=73 Identities=14% Similarity=0.204 Sum_probs=59.7
Q ss_pred ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecc----cceeecccCCCCeeEEEEEEEecccce
Q 013597 334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGL----RIMALAPVEAFGSTDFHLNLIATKLGV 409 (439)
Q Consensus 334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~----s~~~Lg~L~P~~s~~~~L~l~pl~~Gl 409 (439)
++|-.+.-++-|.+.+.|.|+.+..+. +.|.|..++ ++...+. ....+ .|.++++..+.|.+.|...|.
T Consensus 819 ~LPysv~rGEq~~l~v~VfNy~~~~~~-V~V~L~~s~-----~~~~~~~~~~~~~q~v-~v~a~~~~~v~f~i~p~~~G~ 891 (1642)
T 3prx_B 819 QMPYSVVKNEQVEIRAILHNYVNEDIY-VRVELLYNP-----AFCSASTKGQRYRQQF-PIKALSSRAVPFVIVPLEQGL 891 (1642)
T ss_dssp CCCSCEETTCCEEEEEEEEECSSSCEE-EEEEECCCT-----TEEESCCSSSCCEEEE-EECSSEEEEEEEEEEECSCEE
T ss_pred cCCCEEecCCEEEEEEEEEcCCCCcEE-EEEEEEcCC-----CeEeeccCCCcceeEE-EECCCCeEEEEEEEEEeeccc
Confidence 789999999999999999999998877 778887653 5666552 12333 689999999999999999998
Q ss_pred EEeC
Q 013597 410 QRIT 413 (439)
Q Consensus 410 q~is 413 (439)
+.|.
T Consensus 892 ~~i~ 895 (1642)
T 3prx_B 892 HDVE 895 (1642)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8753
No 15
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=86.62 E-value=2.2 Score=50.86 Aligned_cols=73 Identities=14% Similarity=0.165 Sum_probs=59.0
Q ss_pred ecCceeEeCCcEEEEEEEEeCCC-CCcccEEEEEEeCCCCCcceEEEecc----cceeecccCCCCeeEEEEEEEecccc
Q 013597 334 EVPSVVGIDKPFLLKLKLTNQTD-KEQGPFEIWLSQNDSDEEKVVMINGL----RIMALAPVEAFGSTDFHLNLIATKLG 408 (439)
Q Consensus 334 ~~P~~v~l~~pF~v~~~v~N~s~-r~~~~l~l~l~~~~~~~~~~~~~~G~----s~~~Lg~L~P~~s~~~~L~l~pl~~G 408 (439)
++|-+++.++-|.+.+.|.|+++ ..+. +.+.|...+ ++...+. ....+ .|.++++..+.|.+.|...|
T Consensus 833 ~LP~sv~~GD~~~i~~~V~N~~~~~~~~-v~v~l~~~~-----~~~~~~~~~~~~~~~v-~v~a~~~~~v~f~i~p~~~G 905 (1661)
T 2b39_A 833 RLPYSVVRNEQVEIRAILYNYREAENLK-VRVELLYNP-----AFCSLATAKKRHQQTI-TIPARSSVAVPYVIVPLKIG 905 (1661)
T ss_dssp ECCSCEESSCEEEEEEEEEECCTTCCEE-EEEEECCCT-----TEECSSCSSCCCEEEE-EECTTCEEEEEEEEEECSCE
T ss_pred cCCcEEEeCCEEEEEEEEEcCCCCccEE-EEEEEcCCC-----CeEeecCCCCcceEEE-EECCCCcEEEEEEEEEcccC
Confidence 88999999999999999999999 8877 777776653 4555443 22334 68999999999999999999
Q ss_pred eEEeC
Q 013597 409 VQRIT 413 (439)
Q Consensus 409 lq~is 413 (439)
.+.|.
T Consensus 906 ~~~i~ 910 (1661)
T 2b39_A 906 LHEVE 910 (1661)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88763
No 16
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=86.09 E-value=2.8 Score=48.74 Aligned_cols=73 Identities=16% Similarity=0.156 Sum_probs=58.9
Q ss_pred ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc------ceeecccCCCCeeEEEEEEEeccc
Q 013597 334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR------IMALAPVEAFGSTDFHLNLIATKL 407 (439)
Q Consensus 334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s------~~~Lg~L~P~~s~~~~L~l~pl~~ 407 (439)
++|-+++.++-|.+.+.|.|+++..+. +.+.|...+ +++-++|.. ...+ .|.++++..+.|.+.|...
T Consensus 671 ~lP~~v~~Gd~~~l~~~v~N~~~~~~~-v~v~l~~~~----~~~~~~~~~~~~~~~~~~v-~v~~~~~~~v~f~i~~~~~ 744 (1325)
T 2pn5_A 671 NLPYSIKRGEAVVLQFTLFNNLGAEYI-ADVTLYNVA----NQTEFVGRPNTDLSYTKSV-SVPPKVGVPISFLIKARKL 744 (1325)
T ss_dssp ECCSEEETTCEEEEEEEEEECSSSCEE-EEEEEECGG----GCEEETTSCTTCCEEEEEE-EECTTCCEEEEEEEEECSS
T ss_pred CCCcEEEcCCEEEEEEEEEeCCCCcEE-EEEEEeecC----CceEEeccCCCCCcceEEE-EECCCCeEEEEEEEEEccc
Confidence 789999999999999999999998887 888886542 246666542 2334 6799999999999999999
Q ss_pred ceEEe
Q 013597 408 GVQRI 412 (439)
Q Consensus 408 Glq~i 412 (439)
|...|
T Consensus 745 G~~~i 749 (1325)
T 2pn5_A 745 GEMAV 749 (1325)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 97766
No 17
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=85.01 E-value=2.2 Score=34.77 Aligned_cols=73 Identities=18% Similarity=0.179 Sum_probs=58.0
Q ss_pred cceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEEE
Q 013597 95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTAL 173 (439)
Q Consensus 95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~Vs 173 (439)
|.+-+|+.+.+.+++.|--+.+++++.+.+|=--=...... ..+++.||+++...+.+-=+..|.+.|.+..+
T Consensus 14 g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~------~~~~v~pg~~~~~~~~~~P~~~G~~~L~a~f~ 86 (102)
T 2xzz_A 14 GAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKIL------NVGDIGGNETVTLRQSFVPVRPGPRQLIASLD 86 (102)
T ss_dssp SCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEE------EECCBCTTCEEEEEEEECCCSCSSCCCEEEEE
T ss_pred CCcccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEE------EcCcCCCCCEEEEEEEEecCcccceEEEEEEE
Confidence 66788999999999999999999999999873222222111 13468999999999999999999999987754
No 18
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.69 E-value=3.2 Score=34.38 Aligned_cols=69 Identities=13% Similarity=0.133 Sum_probs=51.7
Q ss_pred eEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceEEE
Q 013597 339 VGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVF 418 (439)
Q Consensus 339 v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgI~l~ 418 (439)
+.++..-+.++.|+|..+.... + .+... ..|.+.=. -|.|+||++..+.+++.|..+|...-.=+..+
T Consensus 37 ~~v~~~~~~~~~l~N~g~~~~~-f--~~~~~-----~~F~i~P~----~g~L~pg~~~~i~V~F~P~~~g~~~~~l~v~~ 104 (122)
T 2ys4_A 37 CPVKYSTQKILLVRNIGNKNAV-F--HIKTC-----RPFSIEPA----IGTLNVGESMQLEVEFEPQSVGDHSGRLIVCY 104 (122)
T ss_dssp EESSSCEEEEEEEECCSSSCEE-E--EEECC-----TTEEEESS----EEEECTTCEEEEEEEECCSSSBCCCCBCEEEE
T ss_pred eecCCeEEEEEEEEECCCCCEE-E--EEecC-----CCeEEECC----cCEECCCCEEEEEEEEEcCCCccEEEEEEEEE
Confidence 5788999999999999887655 4 44432 26888643 37889999999999999999998654443333
Q ss_pred e
Q 013597 419 D 419 (439)
Q Consensus 419 D 419 (439)
|
T Consensus 105 ~ 105 (122)
T 2ys4_A 105 D 105 (122)
T ss_dssp S
T ss_pred C
Confidence 4
No 19
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=80.61 E-value=3 Score=45.06 Aligned_cols=72 Identities=13% Similarity=0.179 Sum_probs=53.1
Q ss_pred cCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeec------ccCCCCeeEE
Q 013597 325 SKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA------PVEAFGSTDF 398 (439)
Q Consensus 325 ~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg------~L~P~~s~~~ 398 (439)
..++.+.+. +++.+.++++|.+.+.++|.+++... +.+.+.- ..+.++|.....+. .|.|+++..+
T Consensus 479 ~~~v~~~~~-~~~~~~~G~df~v~l~~~N~s~~~~~-v~~~l~a------~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i 550 (692)
T 1vjj_A 479 EPSIIGKLK-VAGMLAVGKEVNLVLLLKNLSRDTKT-VTVNMTA------WTIIYNGTLVHEVWKDSATMSLDPEEEAEH 550 (692)
T ss_dssp CCSEEEEEE-ECSCCBTTSCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCCEEEEEEEEEEEEEECTTCEEEE
T ss_pred CCCeEEEEE-cCCCCCCCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEeeCCccccceEEeeEEEEECCCceEEE
Confidence 455666653 66778899999999999999887765 6666643 36777777554443 4789999999
Q ss_pred EEEEEe
Q 013597 399 HLNLIA 404 (439)
Q Consensus 399 ~L~l~p 404 (439)
.+.+-+
T Consensus 551 ~~~i~y 556 (692)
T 1vjj_A 551 PIKISY 556 (692)
T ss_dssp EEEECH
T ss_pred EEEECH
Confidence 887644
No 20
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=79.99 E-value=2.7 Score=45.62 Aligned_cols=70 Identities=13% Similarity=0.249 Sum_probs=51.7
Q ss_pred CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeec------ccCCCCeeEEE
Q 013597 326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA------PVEAFGSTDFH 399 (439)
Q Consensus 326 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg------~L~P~~s~~~~ 399 (439)
.++.+.+.. +.+.++++|.+.+.++|.+++... +.+.+.- ..+.++|.....+. .|.|+++..+.
T Consensus 516 ~~v~~~i~~--~~~~iG~df~v~l~~~N~s~~~~~-v~~~l~a------~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~ 586 (731)
T 1ex0_A 516 SNVDMDFEV--ENAVLGKDFKLSITFRNNSHNRYT-ITAYLSA------NITFYTGVPKAEFKKETFDVTLEPLSFKKEA 586 (731)
T ss_dssp -CEEEEEEE--CCCBTTCCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTSCEEEEEEEEEEEEEECTTEEEEEE
T ss_pred CCeEEEEec--CCCCCCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEeeCCccccceeEeeEEEEECCCceEEEE
Confidence 467777764 778899999999999999887765 6666643 35777776544433 47899999998
Q ss_pred EEEEe
Q 013597 400 LNLIA 404 (439)
Q Consensus 400 L~l~p 404 (439)
+.+-+
T Consensus 587 ~~i~y 591 (731)
T 1ex0_A 587 VLIQA 591 (731)
T ss_dssp EEECH
T ss_pred EEECH
Confidence 87654
No 21
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=79.97 E-value=18 Score=29.95 Aligned_cols=77 Identities=14% Similarity=0.227 Sum_probs=54.6
Q ss_pred CeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec-
Q 013597 327 EIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT- 405 (439)
Q Consensus 327 dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl- 405 (439)
||.+.-. .|+.+..+++.+|+..|+|.-......+.+.+.-+. -.+.+ ..++.|.+|.+.++.++.-|.
T Consensus 4 DL~vt~i-tP~~~~~~~~~ti~atVkN~G~~~a~~~~V~ly~~g------~~v~t---~~v~~LaaG~s~tv~~~w~~~~ 73 (114)
T 2l0d_A 4 DLVPVSL-TPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDG------IVVDT---QTVTSLESENSTNVDFHWTLDG 73 (114)
T ss_dssp CEEEEEE-ECSEECTTSEEEEEEEEEECSSSCBCCEEEEEEETT------EEEEE---EEESCBCBTCEEEEEEEEECCC
T ss_pred CcEEEec-cCCCcCCCCeEEEEEEEEECCCCCCCCEEEEEEECC------EEEcc---eecccccCCCEEEEEEEEeecC
Confidence 4433333 488889999999999999996554444667665432 22222 256779999999999988887
Q ss_pred ccceEEeC
Q 013597 406 KLGVQRIT 413 (439)
Q Consensus 406 ~~Glq~is 413 (439)
..|-+.|.
T Consensus 74 ~~G~ytl~ 81 (114)
T 2l0d_A 74 TANSYTLT 81 (114)
T ss_dssp SCSEEEEE
T ss_pred cCceEEEE
Confidence 47888775
No 22
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=78.22 E-value=2.3 Score=50.63 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=61.0
Q ss_pred cCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc-----------ceeecccCCC
Q 013597 325 SKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR-----------IMALAPVEAF 393 (439)
Q Consensus 325 ~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s-----------~~~Lg~L~P~ 393 (439)
.+++-+. .++|-+++.++-|.+.+.|.|+++..+. +.+.|...+ ++...|.. ...+ .|.++
T Consensus 820 ~kpf~v~-~~LP~~v~~GD~~~i~~~V~N~~~~~~~-v~v~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~v-~v~a~ 891 (1676)
T 3cu7_A 820 FKDVFLE-MNIPYSVVRGEQIQLKGTVYNYRTSGMQ-FCVKMSAVE-----GICTSESPVIDHQGTKSSKCVRQ-KVEGS 891 (1676)
T ss_dssp CCSEEEE-EECCSCEETTCCEEEEEEEEECSSSCBC-CCCEECCCT-----TEECSSCC----------CCCCC-CBCTT
T ss_pred EeeEEEE-ccCCcEEEECcEEEEEEEEEcCCCCcEE-EEEEEecCC-----CeEEeccccccccccccceeEEE-EECCC
Confidence 3444332 3889999999999999999999999887 888887543 45555432 1233 67999
Q ss_pred CeeEEEEEEEecccceEEe
Q 013597 394 GSTDFHLNLIATKLGVQRI 412 (439)
Q Consensus 394 ~s~~~~L~l~pl~~Glq~i 412 (439)
++..+.|.+.|...|.+.|
T Consensus 892 ~~~~v~f~i~p~~~G~~~i 910 (1676)
T 3cu7_A 892 SSHLVTFTVLPLEIGLHNI 910 (1676)
T ss_dssp EEEECCEEEEECSSSCCCE
T ss_pred CeEEEEEEEEEcccCcEEE
Confidence 9999999999999997755
No 23
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=77.14 E-value=4.1 Score=44.01 Aligned_cols=71 Identities=15% Similarity=0.163 Sum_probs=50.7
Q ss_pred cCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeec------ccCCCCeeEE
Q 013597 325 SKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA------PVEAFGSTDF 398 (439)
Q Consensus 325 ~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg------~L~P~~s~~~ 398 (439)
..++.+.+. ..+.+ ++++|.+.+.++|.++.... +.+.+.- ..+.++|.....+. .|.|+++..+
T Consensus 470 ~~~v~~~i~-~~~~~-~G~df~v~v~~~N~s~~~~~-v~~~l~a------~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v 540 (695)
T 1g0d_A 470 QGRLQLSIK-HAQPV-FGTDFDVIVEVKNEGGRDAH-AQLTMLA------MAVTYNSLRRGECQRKTISVTVPAHKAHKE 540 (695)
T ss_dssp --CEEEEEE-ECCCB-TTCCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCBCCCCCCEEEEEEEECTTEEEEE
T ss_pred CCCeEEEEE-eCCCC-CCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEeeCCcccCceeEeeEEEEECCCceEEE
Confidence 445667664 44555 99999999999999888765 6666643 36788887554433 4789999988
Q ss_pred EEEEEe
Q 013597 399 HLNLIA 404 (439)
Q Consensus 399 ~L~l~p 404 (439)
.+.+-+
T Consensus 541 ~~~i~y 546 (695)
T 1g0d_A 541 VMRLHY 546 (695)
T ss_dssp EEEECH
T ss_pred EEEECH
Confidence 887654
No 24
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.09 E-value=8.4 Score=30.84 Aligned_cols=71 Identities=11% Similarity=0.191 Sum_probs=50.3
Q ss_pred cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCC----eeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEE
Q 013597 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDK----QRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTL 168 (439)
Q Consensus 93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s----~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L 168 (439)
.||.+++|+.-...+.+.|.+..++. ++. .... ...... .+-+.|.||++.+..|.|.-+..|.+.-
T Consensus 18 dFG~v~~g~~~~~~~~l~N~g~~p~~---~~~--~~~~~~~~~~f~v~----p~~g~i~pg~~~~i~V~f~~~~~g~f~~ 88 (112)
T 2e6j_A 18 DIGKVFTGSAHCYEAILYNKGSIDAL---FNM--TPPTSALGACFVFS----PKEGIIEPSGVQAIQISFSSIILGNFEE 88 (112)
T ss_dssp EEEEEESSCCEEEEEEEEECCSSCEE---EEE--CCCSSHHHHHCEEE----SSEEEECTTBCCEEEEEECCCCCEEEEE
T ss_pred ecEeEEECCEEEEEEEEEECCcceEE---EEE--ecCCccccCcEEEE----CCcCEECCCCEEEEEEEEECCCcceEEE
Confidence 79999999999999999999886543 222 1111 112221 1235799999999999999999998765
Q ss_pred EEEE
Q 013597 169 VCTA 172 (439)
Q Consensus 169 ~c~V 172 (439)
..+|
T Consensus 89 ~i~v 92 (112)
T 2e6j_A 89 EFLV 92 (112)
T ss_dssp EECE
T ss_pred EEEE
Confidence 5554
No 25
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=69.41 E-value=10 Score=32.31 Aligned_cols=73 Identities=10% Similarity=0.017 Sum_probs=51.3
Q ss_pred cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCC-----eeEeccCCCCCCccccCCCCeeeEEEEEEcccc----
Q 013597 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDK-----QRILLLDTSKSPVESIRAGGRYDFIVEHDVKEL---- 163 (439)
Q Consensus 93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s-----~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~---- 163 (439)
.||.+..|+.-+..|.+.|.+.-+++ ++....... ..+... ..-+.|.||++.+..|...+...
T Consensus 35 dFG~v~~~~~~~~~l~I~Ntg~vpa~---F~f~~~~~~~~~~~~wl~v~----P~~G~L~Pge~~~I~v~~~v~~~~~~~ 107 (140)
T 3qbt_B 35 VFENVKFRQLQKEKFQISNNGQVPCH---FSFIPKLNDSQYCKPWLRAE----PFEGYLEPNETVDISLDVYVSKDSVTI 107 (140)
T ss_dssp EEEEECBTCCEEEEEEEEECSSSCEE---EEEECCTTCSSSSCTTEEEE----SCEEEECTTCEEEEEEEECBCHHHHHH
T ss_pred EeeeceeeeeeeeEEEEEcCCccceE---EEEecCCCchhhhhHhhhcC----CcccccCCCCeeEEEEEEEEccCcccc
Confidence 79999999999999999999988775 333322111 112221 12468999999999999987442
Q ss_pred -------CceEEEEEE
Q 013597 164 -------GAHTLVCTA 172 (439)
Q Consensus 164 -------G~h~L~c~V 172 (439)
=..+|+|.|
T Consensus 108 ln~g~~~l~diLvL~V 123 (140)
T 3qbt_B 108 LNSGEDKIEDILVLHL 123 (140)
T ss_dssp HHHSSSCSCEEEEEEE
T ss_pred cccchhhhheeEEEEe
Confidence 245888887
No 26
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=68.55 E-value=14 Score=39.95 Aligned_cols=74 Identities=14% Similarity=0.254 Sum_probs=60.5
Q ss_pred cccceeecceEEEEEEEEcCCCcceEEEEEEEE---EeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEE
Q 013597 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAE---IQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLV 169 (439)
Q Consensus 93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikae---lqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~ 169 (439)
--|.+-+|+.+.+.|++.|--+.+++++.+.+| |.-+..++.+ .+++.||+++...+.+-=+..|.|.|.
T Consensus 593 v~g~~~v~~~~~v~v~f~NPL~~~L~~c~~~vEG~GL~~~~~~~~~-------~~~v~pg~~~~~~~~~~P~~~G~~~L~ 665 (687)
T 2q3z_A 593 ILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEI-------PDPVEAGEEVKVRMDLVPLHMGLHKLV 665 (687)
T ss_dssp EESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTTTCSSCEEEEE-------CSCBCTTCEEEEEEEECCCSSSCEEEE
T ss_pred eCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCCCceEEec-------CCCcCCCCEEEEEEEEEeccccceEEE
Confidence 348889999999999999999999999999987 3322233333 146899999999999999999999998
Q ss_pred EEEE
Q 013597 170 CTAL 173 (439)
Q Consensus 170 c~Vs 173 (439)
+..+
T Consensus 666 a~f~ 669 (687)
T 2q3z_A 666 VNFE 669 (687)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8753
No 27
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=68.24 E-value=14 Score=31.50 Aligned_cols=83 Identities=18% Similarity=0.146 Sum_probs=60.4
Q ss_pred eEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCC-CcceEEEecccceeecccCCCCeeEEEEEEEe-------cccceE
Q 013597 339 VGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSD-EEKVVMINGLRIMALAPVEAFGSTDFHLNLIA-------TKLGVQ 410 (439)
Q Consensus 339 v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~-~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~p-------l~~Glq 410 (439)
|+..++-+-++.|+|.+.-++. +.+....++.. ..+.+-+. ++ =|.|+||++..+.+++.- ++.|-+
T Consensus 39 v~~~~~~~~~l~I~Ntg~vpa~-F~f~~~~~~~~~~~~wl~v~-P~---~G~L~Pge~~~I~v~~~v~~~~~~~ln~g~~ 113 (140)
T 3qbt_B 39 VKFRQLQKEKFQISNNGQVPCH-FSFIPKLNDSQYCKPWLRAE-PF---EGYLEPNETVDISLDVYVSKDSVTILNSGED 113 (140)
T ss_dssp ECBTCCEEEEEEEEECSSSCEE-EEEECCTTCSSSSCTTEEEE-SC---EEEECTTCEEEEEEEECBCHHHHHHHHHSSS
T ss_pred ceeeeeeeeEEEEEcCCccceE-EEEecCCCchhhhhHhhhcC-Cc---ccccCCCCeeEEEEEEEEccCcccccccchh
Confidence 5678888999999999888776 65553322110 12345554 32 467899999999999983 566778
Q ss_pred EeCceEEEecCCCeEe
Q 013597 411 RITGITVFDKLEKITY 426 (439)
Q Consensus 411 ~isgI~l~D~~~~r~y 426 (439)
++..+-+..-..+|.|
T Consensus 114 ~l~diLvL~Ve~G~d~ 129 (140)
T 3qbt_B 114 KIEDILVLHLDRGKDY 129 (140)
T ss_dssp CSCEEEEEEETTSCEE
T ss_pred hhheeEEEEeecCCcE
Confidence 8898888888888888
No 28
>2icn_B Prolactin-inducible protein; beta-pleated sheet, complex, seminal fluid; HET: NAG BMA MAN P6G; 3.23A {Homo sapiens} PDB: 3es6_B*
Probab=64.84 E-value=25 Score=29.27 Aligned_cols=66 Identities=9% Similarity=0.033 Sum_probs=48.9
Q ss_pred ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecc
Q 013597 334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATK 406 (439)
Q Consensus 334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~ 406 (439)
.+|.++.-++.|++++.|.|+-+.-|. +.+.|..+.. ..+ .- ....-.=|-++...+|.|++-|..
T Consensus 13 tlPySv~rgE~f~lkatVfNyL~~Ci~-V~v~L~~S~~--~~~---~~-~~~~s~ClC~~~~ktf~W~v~~~~ 78 (118)
T 2icn_B 13 DIPKSVRPNDEVTAVLAVQTELKECMV-VKTYLISSIP--LQG---AF-NYKYTACLCDDNPKTFYWDFYTNR 78 (118)
T ss_dssp CCCSEECSSCCEEEEEEEEECCSSCEE-EEEEEEESSC--CCG---GG-GCEEEEEECSSSCEEEEEEECCSS
T ss_pred eCCCcccCCCEEEEEEEEEeccCcCEE-EEEEEcCCCC--eEe---ec-CCcCCEEECCCCCEEEEEEEEECc
Confidence 679999999999999999999888887 8888887652 111 00 111112367788899999998884
No 29
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.58 E-value=21 Score=28.31 Aligned_cols=69 Identities=12% Similarity=0.060 Sum_probs=48.5
Q ss_pred eEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcc--eEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceE
Q 013597 339 VGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEK--VVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGIT 416 (439)
Q Consensus 339 v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~--~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgI~ 416 (439)
+.++++-+.++.|+|.++.. +.+++.++. ... .|-+. . .=|.|+||++.++.+++-|-.+|...-. |.
T Consensus 22 v~~g~~~~~~~~l~N~g~~p---~~~~~~~~~--~~~~~~f~v~-p---~~g~i~pg~~~~i~V~f~~~~~g~f~~~-i~ 91 (112)
T 2e6j_A 22 VFTGSAHCYEAILYNKGSID---ALFNMTPPT--SALGACFVFS-P---KEGIIEPSGVQAIQISFSSIILGNFEEE-FL 91 (112)
T ss_dssp EESSCCEEEEEEEEECCSSC---EEEEECCCS--SHHHHHCEEE-S---SEEEECTTBCCEEEEEECCCCCEEEEEE-EC
T ss_pred EEECCEEEEEEEEEECCcce---EEEEEecCC--ccccCcEEEE-C---CcCEECCCCEEEEEEEEECCCcceEEEE-EE
Confidence 56889999999999998875 456654422 111 24443 2 2457899999999999999999976543 44
Q ss_pred E
Q 013597 417 V 417 (439)
Q Consensus 417 l 417 (439)
+
T Consensus 92 v 92 (112)
T 2e6j_A 92 V 92 (112)
T ss_dssp E
T ss_pred E
Confidence 3
No 30
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=63.32 E-value=20 Score=29.38 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=45.6
Q ss_pred cCCeEEEEEecCcee-------EeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeE
Q 013597 325 SKEIELNVVEVPSVV-------GIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTD 397 (439)
Q Consensus 325 ~~dl~l~v~~~P~~v-------~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~ 397 (439)
..++++.|..-.... .|+- ..+++|.|.++..+. +.|.++.- +++-|.|... + .++||+...
T Consensus 8 R~~~~l~V~rdR~~Ly~~~~dG~I~N--~Ytlki~Nkt~~~~~-~~l~v~g~-----~~l~~~g~~~--i-~v~~g~~~~ 76 (118)
T 2r39_A 8 VDPAGMSVIRDRNQLFRVNSAGEVEN--TYTLKVINKTQQVQE-YNLDVKGL-----NDVSWYGKQT--I-QVEPGEVLN 76 (118)
T ss_dssp CCSEEEEEEECSSCCCCC--CCSEEE--EEEEEEEECSSSCEE-EEEEEESC-----SSCEEESCCE--E-EECTTCEEE
T ss_pred cCccEEEEEecCCceEEEcCCCeEEE--EEEEEEEECCCCCEE-EEEEEeCC-----cccEEeCCCc--E-EECCCCEEE
Confidence 455666666443221 1222 357789999999887 88888653 3588888653 3 579999888
Q ss_pred EEEEEEe
Q 013597 398 FHLNLIA 404 (439)
Q Consensus 398 ~~L~l~p 404 (439)
+.+.+-.
T Consensus 77 ~~v~v~~ 83 (118)
T 2r39_A 77 LPMSLGA 83 (118)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7777644
No 31
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=61.00 E-value=16 Score=36.50 Aligned_cols=91 Identities=18% Similarity=0.209 Sum_probs=60.6
Q ss_pred ccCCeEEEEEecCce-eEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCC-----CCcceEEEecccceeecccCCCCeeE
Q 013597 324 TSKEIELNVVEVPSV-VGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDS-----DEEKVVMINGLRIMALAPVEAFGSTD 397 (439)
Q Consensus 324 ~~~dl~l~v~~~P~~-v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~-----~~~~~~~~~G~s~~~Lg~L~P~~s~~ 397 (439)
..+.|.+.+ .+|.. ..-+++..+++.|.|+|++.+..+.+.|...-+ ....-..++... .=..|.||++.+
T Consensus 209 ssGpl~L~v-sLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~y~~~Va~~E--~~epV~pgst~~ 285 (380)
T 3ugu_A 209 SDKPLRLAV-SLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEE--AQEKVPPNSSLT 285 (380)
T ss_dssp CCCEEEEEE-EESCSEEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCEEEEEEEEEE--CSCCBCTTEEEE
T ss_pred cCCCEEEEE-EeCCccCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCeEEEEEEEec--cCCcCCCCCeEE
Confidence 455565554 56644 678999999999999999998767787776420 000000111110 012689999988
Q ss_pred EEEEEEecccceEEeCceEE
Q 013597 398 FHLNLIATKLGVQRITGITV 417 (439)
Q Consensus 398 ~~L~l~pl~~Glq~isgI~l 417 (439)
=.+++.|+...-..=.||.|
T Consensus 286 k~~~l~P~l~~n~~krglAL 305 (380)
T 3ugu_A 286 KTLTLVPLLANNRERRGIAL 305 (380)
T ss_dssp EEEEECCCGGGCSCCTTSCB
T ss_pred eeEEEEEecccCCceeeEEe
Confidence 89999999887776667665
No 32
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=60.98 E-value=16 Score=30.34 Aligned_cols=50 Identities=18% Similarity=0.263 Sum_probs=36.3
Q ss_pred EEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013597 346 LLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT 405 (439)
Q Consensus 346 ~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl 405 (439)
..+++|+|.++..+. +.|...+. .-+.+.-. .|.|+||++.++.+.+.|-
T Consensus 26 ~~~l~L~N~t~~~vA-FKVKtT~p-----~~YrVrP~----~G~I~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLA-FKVKSSNN-----EHYRVRPV----YGFVDAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEE-EEEEESCT-----TTEEEECS----EEEECTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEE-EEEEecCC-----CceEEcCC----ceEECCCCeEEEEEEeCCC
Confidence 688899999887654 55554333 24555543 7889999999999998873
No 33
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=59.97 E-value=20 Score=29.82 Aligned_cols=53 Identities=11% Similarity=0.074 Sum_probs=37.4
Q ss_pred CcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013597 343 KPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT 405 (439)
Q Consensus 343 ~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl 405 (439)
+.....++|+|.+++. +...+.... ..-+.+.=. .|.|+||++.++.+.+-|.
T Consensus 27 ~~~~~~l~L~N~s~~~---vaFKVKTT~---p~~y~VrP~----~G~i~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRK---VCFKVKTTA---PRRYCVRPN----SGVIDPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSC---EEEEEEESC---GGGEEEESC----EEEECTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCe---EEEEEECCC---CCceEEeCC----CcEECCCCeEEEEEEECcC
Confidence 4557889999998865 445555442 223444432 6889999999999998775
No 34
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=59.12 E-value=19 Score=30.10 Aligned_cols=55 Identities=9% Similarity=0.117 Sum_probs=38.4
Q ss_pred cEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccc
Q 013597 344 PFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLG 408 (439)
Q Consensus 344 pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~G 408 (439)
..+..++|+|.|++.+. +.|.-... .-+.+.= .-|.|+||++..+.+.+-|...+
T Consensus 26 ~~~~~l~l~N~s~~~va-FKVKTT~p-----~~y~VrP----~~Gii~P~~s~~v~V~~q~~~~~ 80 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIG-WAIKTTNM-----RRLSVDP----PCGVLDPKEKVLMAVSCDTFNAA 80 (126)
T ss_dssp CCCEEEEEEECSSSCEE-EEEEESCT-----TTEEEES----CEEEECTTCEEEEEEEECCCCGG
T ss_pred ceEEEEEEECCCCCeEE-EEEEcCCC-----CcEEEEC----CCeEECCCCEEEEEEEecCCCCC
Confidence 34578899999998755 55443222 2344443 36789999999999999887654
No 35
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=58.67 E-value=64 Score=26.99 Aligned_cols=73 Identities=10% Similarity=0.030 Sum_probs=56.7
Q ss_pred ceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEEEEE
Q 013597 96 AIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYS 175 (439)
Q Consensus 96 ~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~VsY~ 175 (439)
.+..|++-...+.|.|.....+.+..++.-+ ....+. . ..+ .|++|++-...+.+.-+..|.|.|...|.+.
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyv--ng~~v~---t--~~v-~La~G~s~tv~f~~~~~~~G~~~v~AvVD~~ 99 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKVRVYI--NGTLYK---N--WTV-SLGPKEEKVLTFNWTPTQEGMYRINATVDEE 99 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEEEEEE--TTEEEE---E--EEE-EECTTCEEEEEEEECCSSCEEEEEEEEESTT
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEEEEEE--CCEEEe---e--EEe-ccCCCCeEEEEEEEEcCCCcEEEEEEEEcCC
Confidence 6788999999999999999999887766644 333221 1 123 5999999988888888889999999988654
Q ss_pred c
Q 013597 176 D 176 (439)
Q Consensus 176 ~ 176 (439)
.
T Consensus 100 n 100 (127)
T 3idu_A 100 N 100 (127)
T ss_dssp C
T ss_pred C
Confidence 3
No 36
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=57.89 E-value=20 Score=29.32 Aligned_cols=49 Identities=27% Similarity=0.206 Sum_probs=35.6
Q ss_pred EEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEe
Q 013597 346 LLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIA 404 (439)
Q Consensus 346 ~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~p 404 (439)
..+++|+|.++..+. +.|..... .-+.+.-. .|.|+||++.++.+.+.|
T Consensus 18 ~~~l~L~N~t~~~va-FKVKtT~p-----~~y~VrP~----~G~I~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIV-FKIKSSNN-----NEYRIAPV----FGFVDPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEE-EEEEESCS-----SSEEEECS----EEEECTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEE-EEEEeCCC-----CceEEcCC----ceEECCCCeEEEEEEeCC
Confidence 478899999887654 55554332 24555543 788999999999999887
No 37
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=57.25 E-value=28 Score=32.84 Aligned_cols=58 Identities=19% Similarity=0.220 Sum_probs=42.4
Q ss_pred CCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEe
Q 013597 342 DKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIA 404 (439)
Q Consensus 342 ~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~p 404 (439)
+--..+.++++|++...+..+.|++..+. =|+...+..... ..|+||++.++.+.+-.
T Consensus 54 ~g~i~l~l~~~N~s~~~is~faIQfNkNs----FGL~p~~~~~~~-~~L~pgqs~~v~lpl~~ 111 (258)
T 2g30_A 54 QGHIYMEMNFTNKALQHMTDFAIQFNKNS----FGVIPSTPLAIH-TPLMPNQSIDVSLPLNT 111 (258)
T ss_dssp TTEEEEEEEEEECSSSCBCCCEEEECCBT----TCCEESSCCCCC-SCBCTTCEEEEEEEEES
T ss_pred CCEEEEEEEEecCCccceeeeEEEEcccc----cCcccCccccCC-CccCCCCcEEEEEeeec
Confidence 45566789999999999988999996653 355555543221 46999999998887554
No 38
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=57.10 E-value=20 Score=35.82 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=26.1
Q ss_pred eeecceEEEEEEEEcCCCcceEEEEEEEE
Q 013597 97 IYLGETFCSYISINNSSTLEVRDVVIKAE 125 (439)
Q Consensus 97 iylGEtFs~~i~v~N~s~~~v~~V~ikae 125 (439)
-|=||+....++|+|.|+..|+.+.+++.
T Consensus 224 Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~ 252 (380)
T 3ugu_A 224 YYHGEPIPVTVAVTNSTEKTVKKIKVLVE 252 (380)
T ss_dssp EETTCCEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CcCCCEEEEEEEEEcCCCCeEeEEEEEEE
Confidence 47799999999999999999999988763
No 39
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=56.30 E-value=73 Score=26.48 Aligned_cols=92 Identities=16% Similarity=0.119 Sum_probs=51.4
Q ss_pred ecceEEEEEEEEcCCCcceEEE-----EEEEEEeCC-CeeEe-ccCCC----CCCccccCCCCeeeEEEEEE-ccccCce
Q 013597 99 LGETFCSYISINNSSTLEVRDV-----VIKAEIQTD-KQRIL-LLDTS----KSPVESIRAGGRYDFIVEHD-VKELGAH 166 (439)
Q Consensus 99 lGEtFs~~i~v~N~s~~~v~~V-----~ikaelqT~-s~r~~-L~~~~----~~~~~~L~pg~~ld~iv~~~-lke~G~h 166 (439)
.|+.....|.+.|.++.++.-- +....+... ..++- -++.. ......|+||+++.+-...+ .-+.|.|
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Y 95 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTY 95 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccE
Confidence 6899999999999988765311 111122221 11221 11100 11234699999998888777 3467999
Q ss_pred EEEEEEEEEcCCCceeeeceEEEEEe
Q 013597 167 TLVCTALYSDGEGERKYLPQFFKFIV 192 (439)
Q Consensus 167 ~L~c~VsY~~~~Ge~~~frK~fkF~v 192 (439)
+|.+.. .-..-+.+.++--=+|+|
T Consensus 96 tl~a~l--~~~~~~~~~~~~~~~~~~ 119 (120)
T 3isy_A 96 EVKVTF--KGRAENLKQVQAVQQFEV 119 (120)
T ss_dssp EEEEEE--CCEETTCCCCEEEEEEEE
T ss_pred EEEEEE--EeeeccceeeeeeeEEEe
Confidence 988664 221122344444445554
No 40
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=55.94 E-value=65 Score=26.49 Aligned_cols=72 Identities=10% Similarity=0.044 Sum_probs=50.6
Q ss_pred eeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEcc-ccCceEEEEEEEEE
Q 013597 97 IYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVK-ELGAHTLVCTALYS 175 (439)
Q Consensus 97 iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lk-e~G~h~L~c~VsY~ 175 (439)
.+.|+.-...+.|.|..........++.-+ ....+. ..++..|++|.+-...+.+.-. +.|.|.|...|...
T Consensus 15 ~~~~~~~ti~atVkN~G~~~a~~~~V~ly~--~g~~v~-----t~~v~~LaaG~s~tv~~~w~~~~~~G~ytl~a~VD~~ 87 (114)
T 2l0d_A 15 VVPNTVNTMTATIENQGNKDSTSFNVSLLV--DGIVVD-----TQTVTSLESENSTNVDFHWTLDGTANSYTLTVNVDPE 87 (114)
T ss_dssp ECTTSEEEEEEEEEECSSSCBCCEEEEEEE--TTEEEE-----EEEESCBCBTCEEEEEEEEECCCSCSEEEEEEEECTT
T ss_pred cCCCCeEEEEEEEEECCCCCCCCEEEEEEE--CCEEEc-----ceecccccCCCEEEEEEEEeecCcCceEEEEEEECCC
Confidence 889999999999999977665554444322 222211 1235679999987777777777 68999999988554
No 41
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=55.28 E-value=46 Score=33.42 Aligned_cols=82 Identities=13% Similarity=0.116 Sum_probs=55.0
Q ss_pred ccCCeEEEEEecCce-eEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCC-----CCcceEEEecccceeecccCCCCeeE
Q 013597 324 TSKEIELNVVEVPSV-VGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDS-----DEEKVVMINGLRIMALAPVEAFGSTD 397 (439)
Q Consensus 324 ~~~dl~l~v~~~P~~-v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~-----~~~~~~~~~G~s~~~Lg~L~P~~s~~ 397 (439)
..+.|.|.+ .+|.. ..-+++..+++.|.|+|++....+.+.|.+--+ ....-..++-. ..-+.+.||++..
T Consensus 190 ssGpl~l~v-sLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~~k~~Va~~--e~~e~V~pgst~~ 266 (392)
T 1suj_A 190 SDRPLHLEA-SLDKEIYYHGEPINVNVKINNTTGKIVKKIKIIVEQVTDVVLFSLDKYVKTVCAE--ETNDTVAANSTLS 266 (392)
T ss_dssp TTEEEEEEE-EESCSEEETTCCEEEEEEEEECSSSEEEEEEEEEEEEEEECSSSCCEEEEEEEEE--ECCCCBCTTEEEE
T ss_pred cCCCEEEEE-EeCCccccCCCEEEEEEEEECCCCCcEeEEEEEEEEEEEEEEecCCcEEEEEEEE--ecCCCcCCCCEEE
Confidence 455565554 56655 678999999999999999988877777766310 01111112211 0123679999999
Q ss_pred EEEEEEecccc
Q 013597 398 FHLNLIATKLG 408 (439)
Q Consensus 398 ~~L~l~pl~~G 408 (439)
..+.|+|+.+-
T Consensus 267 k~~~L~P~l~~ 277 (392)
T 1suj_A 267 KTFSVTPMLAN 277 (392)
T ss_dssp EEEEECCCGGG
T ss_pred EEEEEeccccC
Confidence 99999988873
No 42
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=53.23 E-value=72 Score=28.83 Aligned_cols=78 Identities=17% Similarity=0.164 Sum_probs=55.1
Q ss_pred ccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEcccc-Cc----e
Q 013597 92 QAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKEL-GA----H 166 (439)
Q Consensus 92 ~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~-G~----h 166 (439)
-.||.+- |+.-...+.+.|..+.++.--.++. .++-....+. -..++||++.+..|.|+-+.. |. +
T Consensus 126 ~dfG~i~-g~~~~~~f~i~N~G~~pL~I~~v~~--scgct~~~~~------~~~i~PGe~~~i~v~~~~~~~~g~~~~~~ 196 (220)
T 2qsv_A 126 LDMGQLD-GETTKAAIEIRNVGAGPLRLHSVTT--RNPALTAVPD------RTEIKPGGSTLLRIAVDPQVMKAEGWQSI 196 (220)
T ss_dssp EEEEECT-TSCEEEEEEEEECSSSCEEEEEEEE--CSTTEEEEES------CSEECTTCEEEEEEEECHHHHHHTTCSEE
T ss_pred EeeeccC-CCeEEEEEEEEECCCCCEEEEEEEe--CCCCEeeecC------CccCCCCCEEEEEEEEecCCCCCccccee
Confidence 3799999 9999999999999988765443322 2222233321 125899999999999999988 88 7
Q ss_pred EEEEEEEEEcCC
Q 013597 167 TLVCTALYSDGE 178 (439)
Q Consensus 167 ~L~c~VsY~~~~ 178 (439)
.-.++|.-.+++
T Consensus 197 ~~~i~v~~N~~~ 208 (220)
T 2qsv_A 197 AADISIICNDPQ 208 (220)
T ss_dssp EEEEEEEESCTT
T ss_pred ccEEEEEECCCC
Confidence 677776333343
No 43
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=51.77 E-value=54 Score=28.89 Aligned_cols=93 Identities=14% Similarity=0.041 Sum_probs=57.1
Q ss_pred CceeEeCCcEEEEEEEEeCCC-CCcccEEEEEEeCCCCCcceEEEecccce----ee-cc-cCCCC--eeEEEEEEEecc
Q 013597 336 PSVVGIDKPFLLKLKLTNQTD-KEQGPFEIWLSQNDSDEEKVVMINGLRIM----AL-AP-VEAFG--STDFHLNLIATK 406 (439)
Q Consensus 336 P~~v~l~~pF~v~~~v~N~s~-r~~~~l~l~l~~~~~~~~~~~~~~G~s~~----~L-g~-L~P~~--s~~~~L~l~pl~ 406 (439)
.+.+..++++++++++.-+.+ +... +-+.+.... +..+.|.... .+ .. +.+|. ..+|.+. ++|.
T Consensus 63 ~~~~~~Ge~v~l~i~~~~~~~i~~~v-~G~~Ik~~~-----G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f~f~-l~L~ 135 (188)
T 2r5o_A 63 PPSLTGNQQTDFLMKVVFEYDFDCVV-PGILIKTLD-----GLFLYGTNSFLASEGRENISVSRGDVRVFKFSLP-VDLN 135 (188)
T ss_dssp CSSEETTCEEEEEEEEEESSCEEEEE-EEEEEEETT-----CCEEEEEEHHHHTTTCCCEEECTTCEEEEEEEEE-CCBC
T ss_pred eeEEeCCCEEEEEEEEEECCcCCccE-EEEEEECCC-----CCEEEecCcccccccccccccCCCCEEEEEEEEe-cccC
Confidence 456889999999999987743 2222 456666543 5555554432 33 33 67888 5567778 5999
Q ss_pred cceEEeCceEEEecC---CCeEeccCCCeeeEe
Q 013597 407 LGVQRITGITVFDKL---EKITYDSLPDLEIFV 436 (439)
Q Consensus 407 ~Glq~isgI~l~D~~---~~r~y~~~~~~~vfV 436 (439)
+|--.|+= .|.|.. ....|++...+-.|-
T Consensus 136 ~G~Y~lsv-~i~~~~~~~~~~~~d~~~da~~F~ 167 (188)
T 2r5o_A 136 SGDYLLSF-GISAGNPQTDMTPLDRRYDSIILH 167 (188)
T ss_dssp SEEEEEEE-EEEEEETTTEEEEEEEEEEEEEEE
T ss_pred CCeEEEEE-EEecCCcCCCcEEEEEEccEEEEE
Confidence 99998874 334432 333456554444443
No 44
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=51.49 E-value=26 Score=29.97 Aligned_cols=53 Identities=11% Similarity=0.076 Sum_probs=36.8
Q ss_pred CcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013597 343 KPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT 405 (439)
Q Consensus 343 ~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl 405 (439)
+...-.++|+|.+++.+ ...+.... ..-+.+.= ..|.|+|+++..+.+.+.|.
T Consensus 31 ~~~~~~l~L~N~s~~~V---aFKVKTT~---p~~y~VrP----~~GiI~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKV---CFKVKTTA---PRRYCVRP----NSGIIDPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCE---EEEEEESC---TTSEEEES----SEEECCTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcE---EEEEECCC---CccEEEcC----CCcEECCCCeEEEEEEECCC
Confidence 44567899999988764 45555442 12344443 26889999999999998775
No 45
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=50.12 E-value=1.1e+02 Score=25.40 Aligned_cols=81 Identities=15% Similarity=0.183 Sum_probs=49.1
Q ss_pred CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcc-------cEEEEEEeCCCCCcceEEE--ec----ccceeecccCC
Q 013597 326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQG-------PFEIWLSQNDSDEEKVVMI--NG----LRIMALAPVEA 392 (439)
Q Consensus 326 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~-------~l~l~l~~~~~~~~~~~~~--~G----~s~~~Lg~L~P 392 (439)
++|.+.|.- -..+....+++.|+|.+++... -..+.|... ....+| +- .....--.|+|
T Consensus 5 ~~l~~~v~~----~~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~----~G~~VwrwS~~~~FtQa~~~~tl~p 76 (120)
T 3isy_A 5 QEVVLSIDA----IQEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDS----EHKERYRYSKEKMFTQAFQNLTLES 76 (120)
T ss_dssp CSEEEEEEE----EECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECT----TCCEEEETTTTCCCCCCCEEEEECT
T ss_pred cEEEEEEee----ccCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECC----CCCEEEEccccchhhhhhceEEECC
Confidence 456666531 2366799999999999887643 022333321 124555 21 11122335899
Q ss_pred CCeeEEEEEEE-ecccceEEeCc
Q 013597 393 FGSTDFHLNLI-ATKLGVQRITG 414 (439)
Q Consensus 393 ~~s~~~~L~l~-pl~~Glq~isg 414 (439)
|.+..+..+.= ++.+|--.+.+
T Consensus 77 GE~~~f~~~w~~~~~pG~Ytl~a 99 (120)
T 3isy_A 77 GETYDFSDVWKEVPEPGTYEVKV 99 (120)
T ss_dssp TCEEEEEEEESSCCCSEEEEEEE
T ss_pred CCEEEEEEEeCCCCCCccEEEEE
Confidence 99999998877 46777666655
No 46
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=50.09 E-value=28 Score=35.03 Aligned_cols=30 Identities=30% Similarity=0.400 Sum_probs=26.1
Q ss_pred eeecceEEEEEEEEcCCCcceEEEEEEEEE
Q 013597 97 IYLGETFCSYISINNSSTLEVRDVVIKAEI 126 (439)
Q Consensus 97 iylGEtFs~~i~v~N~s~~~v~~V~ikael 126 (439)
-|-||+....++|.|.|+..|+.+.+++..
T Consensus 205 Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q 234 (392)
T 1suj_A 205 YYHGEPINVNVKINNTTGKIVKKIKIIVEQ 234 (392)
T ss_dssp EETTCCEEEEEEEEECSSSEEEEEEEEEEE
T ss_pred ccCCCEEEEEEEEECCCCCcEeEEEEEEEE
Confidence 367999999999999999999998877743
No 47
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=42.73 E-value=33 Score=29.57 Aligned_cols=53 Identities=11% Similarity=-0.009 Sum_probs=36.6
Q ss_pred cEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecc
Q 013597 344 PFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATK 406 (439)
Q Consensus 344 pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~ 406 (439)
.....++|+|.++.. +...+.... -.-+.+.= ..|.|+|+++.++.+.+.|..
T Consensus 36 ~~~~~l~L~N~s~~~---VaFKVKTT~---p~~y~VrP----~~GiI~P~~s~~V~V~lq~~~ 88 (152)
T 1wic_A 36 EKKTLIVLTNVTKNI---VAFKVRTTA---PEKYRVKP----SNSSCDPGASIDIIVSPHGGL 88 (152)
T ss_dssp CCCEEEEEEBCSSSC---EEEEEEESC---TTTEEEES----SEEEECTTCEEEEEEEECSSS
T ss_pred eEEEEEEEEcCCCCe---EEEEEECCC---CCceeecC----CCcEECCCCeEEEEEEecCcc
Confidence 335789999998865 445555432 12344443 378899999999999997753
No 48
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=40.04 E-value=76 Score=31.74 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=54.7
Q ss_pred CccCCeEEEEEecCce-eEeCCcEEEEEEEEeCCCCCcccEEEEEEeCC-----CCCcceEEEecccceeecccCCCCee
Q 013597 323 ITSKEIELNVVEVPSV-VGIDKPFLLKLKLTNQTDKEQGPFEIWLSQND-----SDEEKVVMINGLRIMALAPVEAFGST 396 (439)
Q Consensus 323 p~~~dl~l~v~~~P~~-v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~-----~~~~~~~~~~G~s~~~Lg~L~P~~s~ 396 (439)
-..+.+.+.+ .+|.. ..-+++..+++.|.|+|.+.+..+.+.|.... .....-..+.-.. .-..+.||++.
T Consensus 192 ~~sG~l~l~~-sldk~~Y~pGE~I~v~v~I~N~S~k~Vk~Ikv~L~Q~~~~~~~s~~~~k~~Va~~e--~~~~V~~gs~~ 268 (393)
T 1g4m_A 192 MSDKPLHLEA-SLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEE--ADDTVAPSSTF 268 (393)
T ss_dssp SSSSCEEEEE-EESCSEEETTCCEEEEEEEEECSSCCEEEEEEEEEEEEEECSSBCEEEEEEEEEEE--ECCCBCTTEEE
T ss_pred EcCCCEEEEE-EECCceEcCCCEEEEEEEEEcCCCCEEeEEEEEEEEEEEEEEecCCceEEEEEEEe--cCCcCCCCCEE
Confidence 3466676665 56655 67899999999999999998877888886631 0000001111111 12258999998
Q ss_pred EEEEEEEecccc
Q 013597 397 DFHLNLIATKLG 408 (439)
Q Consensus 397 ~~~L~l~pl~~G 408 (439)
...+.|+|+.+-
T Consensus 269 ~~~~~L~P~l~p 280 (393)
T 1g4m_A 269 CKVYTLTPFLAN 280 (393)
T ss_dssp EEEEEECCCGGG
T ss_pred eeEEEEcCCCCC
Confidence 888999888763
No 49
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=37.93 E-value=21 Score=29.98 Aligned_cols=70 Identities=9% Similarity=-0.012 Sum_probs=42.2
Q ss_pred EecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeE--EEEEEEecc
Q 013597 333 VEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTD--FHLNLIATK 406 (439)
Q Consensus 333 ~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~--~~L~l~pl~ 406 (439)
.--|+....+..++|+..|+|.-......+.|.+--++. ...+. ..|. ..++.|.+|++.. +.++.-++.
T Consensus 6 s~sP~~p~~g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p-~~gg~-~vgt--~tv~~LaaG~s~t~~v~~~~~~~~ 77 (122)
T 2kut_A 6 TLSKETPFEGEEITVSARVTNRGAAEAHNVPVAVYLGNP-AQGGV-EIGR--DTISRIPVGGTGLARVQWKATRKL 77 (122)
T ss_dssp ECCTTSCCTTCEEEEEEEEECCSSSCBCCCCEEECSSCT-TTCCC-CCBC--CCCSCBCTTCEEECCEEEECCCCC
T ss_pred ecCCCCCCCCCeEEEEEEEEeCCCcccCcEEEEEEeCCC-ccCCe-EEee--EEccccCCCCeEEEEEEEecCCcc
Confidence 346888899999999999999844332224444433220 01111 2222 3468899999999 555444443
No 50
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=36.16 E-value=66 Score=26.07 Aligned_cols=64 Identities=13% Similarity=0.149 Sum_probs=43.0
Q ss_pred cceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEE
Q 013597 95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA 172 (439)
Q Consensus 95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~V 172 (439)
+.+.+|+..+..|...+... .++|++..++.+. + .. .+...+.=...|.|--+|.|.|.+.+.+
T Consensus 22 ~~~~vg~~~~F~V~~~~a~g------~l~v~V~~P~g~~-~----~~---~v~d~~~gty~v~ytP~~~G~h~v~V~~ 85 (112)
T 2d7p_A 22 TGLKVNQPASFAVQLNGARG------VIDARVHTPSGAV-E----EC---YVSELDSDKHTIRFIPHENGVHSIDVKF 85 (112)
T ss_dssp BCCCTTCCEEEEEECTTCCS------CEEEEEECSSSCB-C----CC---EECSCBTTEEEEEECCSSCEEEEEEEEE
T ss_pred CCcccCCcEEEEEEeCCCCC------CEEEEEECCCCCe-e----ee---EEEeCCCCeEEEEEEcCCCEeEEEEEEE
Confidence 35789999988888876632 6788888876542 1 01 1222222236799999999999988764
No 51
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=34.16 E-value=1.8e+02 Score=26.91 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=46.9
Q ss_pred ccccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCC---CccccCCCCeeeEEEEEEccccC
Q 013597 88 LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKS---PVESIRAGGRYDFIVEHDVKELG 164 (439)
Q Consensus 88 L~LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~---~~~~L~pg~~ld~iv~~~lke~G 164 (439)
++||.++ --||.|..-..|.|..+.. +.++|.|.... .+.+...... ..-.+.+++.-.......-+++|
T Consensus 86 ~~LP~sv---~rGE~~~l~~~V~Ny~~~~---~~v~V~l~~~~-~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G 158 (252)
T 3hrz_B 86 LQMPYSV---VKNEQVEIRAILHNYVNED---IYVRVELLYNP-AFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQG 158 (252)
T ss_dssp ECCCSCE---ETTCCEEEEEEEEECSSSC---EEEEEEECCCT-TEEESCCSSCCEEEEEEECTTEEEEEEEEEEECSSE
T ss_pred cCCCcEE---eeCCEEEEEEEEEcccCce---EEEEEEEEcCC-ceEeecCCCCceEEEEEECCCCeEEEEEEEEeccCC
Confidence 6888875 4699999999999998765 34555555432 1222111000 01245666543333333346888
Q ss_pred ceEEEEEEE
Q 013597 165 AHTLVCTAL 173 (439)
Q Consensus 165 ~h~L~c~Vs 173 (439)
.|.+.+++.
T Consensus 159 ~~~i~v~A~ 167 (252)
T 3hrz_B 159 LHDVEIKAS 167 (252)
T ss_dssp EEEEEEEEE
T ss_pred cEEEEEEEE
Confidence 888877764
No 52
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=33.26 E-value=97 Score=30.45 Aligned_cols=83 Identities=19% Similarity=0.168 Sum_probs=57.4
Q ss_pred eEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCC-cceEEEecccceeecccCCCCeeEEEEEEEecc-------cceE
Q 013597 339 VGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDE-EKVVMINGLRIMALAPVEAFGSTDFHLNLIATK-------LGVQ 410 (439)
Q Consensus 339 v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~-~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~-------~Glq 410 (439)
|+..++-+-++.|+|.+.-+.. +.+.-...+... .+++-+. +. =|.|+||++.++.+++..-. .|-+
T Consensus 42 v~~~~~~~~~l~i~N~g~~pa~-f~f~~~~~~~~~~~~wl~v~-p~---~g~l~Pge~~~i~l~~~v~~~~~~~ln~g~~ 116 (366)
T 3qis_A 42 VKFRQLQKEKFQISNNGQVPCH-FSFIPKLNDSQYCKPWLRAE-PF---EGYLEPNETVDISLDVYVSKDSVTILNSGED 116 (366)
T ss_dssp ECBTCCEEEEEEEEECSSSCEE-EEEECCTTCSSSSCTTEEEE-SC---EEEECTTCEEEEEEEECBCTTTHHHHHHTSS
T ss_pred eeeCCeEEEEEEEEecCCceEE-EEEEeCCCCCCCCCCcEEEe-CC---ccEECCCCEEEEEEEEEECHHHHHHHhcCcc
Confidence 6788999999999999887765 555332222111 1234443 32 46789999999999998655 5777
Q ss_pred EeCceEEEecCCCeEe
Q 013597 411 RITGITVFDKLEKITY 426 (439)
Q Consensus 411 ~isgI~l~D~~~~r~y 426 (439)
++..|-+.....++.+
T Consensus 117 ~l~diLvL~ve~G~d~ 132 (366)
T 3qis_A 117 KIEDILVLHLDRGKDY 132 (366)
T ss_dssp CSCEEEEEEETTSCEE
T ss_pred ccceEEEEEEeCCCcE
Confidence 7888777766667766
No 53
>1kyf_A Alpha-adaptin C; protein-peptide complex, endocytosis, endocytosis/exocytosis complex; 1.22A {Mus musculus} SCOP: b.1.10.1 d.105.1.1 PDB: 1ky7_A 1kyd_A 1ky6_A 1kyu_A 1qtp_A 1qts_A 2vj0_A 1w80_A 1b9k_A
Probab=27.87 E-value=1e+02 Score=28.64 Aligned_cols=77 Identities=10% Similarity=0.060 Sum_probs=56.5
Q ss_pred eeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCe---eEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEEE
Q 013597 97 IYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQ---RILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTAL 173 (439)
Q Consensus 97 iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~---r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~Vs 173 (439)
-|-|..-...+.+.|-++.+++++.+.++- +.. .+.+.. ......++||+..+..+..++...=...-...++
T Consensus 38 e~~~~~gri~l~~gNKs~~~l~~f~~~i~~--~~~~~~~l~~~~--~~~~~~I~~~~q~qq~i~v~~~~~f~~~P~l~is 113 (247)
T 1kyf_A 38 EFRQNLGRMFIFYGNKTSTQFLNFTPTLIC--ADDLQTNLNLQT--KPVDPTVDGGAQVQQVVNIECISDFTEAPVLNIQ 113 (247)
T ss_dssp EEETTEEEEEEEEEECSSSCBEEEEEEEEC--CHHHHHHEEEEE--CCCCSCBCTTCEEEEEEEEEECSCCCCCCEEEEE
T ss_pred EEeCCeEEEEEEEEcCCCCceeeEEEEEec--CcccCCCeeEec--CCCCceeCCCcEEEEEEEEEEccccCCCCEEEEE
Confidence 466777788889999999999999876643 321 122211 1123469999999999999999988778888999
Q ss_pred EEcC
Q 013597 174 YSDG 177 (439)
Q Consensus 174 Y~~~ 177 (439)
|..+
T Consensus 114 f~~~ 117 (247)
T 1kyf_A 114 FRYG 117 (247)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9765
No 54
>3hs8_A Adaptor protein complex AP-2, alpha 2 subunit; adaptor complex AP-2, endocytosis, cell membrane, coated PIT binding, membrane, disease mutation; 1.90A {Mus musculus}
Probab=25.57 E-value=69 Score=30.41 Aligned_cols=76 Identities=9% Similarity=0.052 Sum_probs=55.9
Q ss_pred eeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCe---eEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEEE
Q 013597 97 IYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQ---RILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTAL 173 (439)
Q Consensus 97 iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~---r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~Vs 173 (439)
-|-|...+..+-+.|-++.+++++++.++ .+.. .+.+ .....+ ..|+||+..+..+..+++..=...-...++
T Consensus 64 e~~~~~g~i~L~~gNKs~~~it~f~~~i~--~~~~~~~~l~~-~~~~~~-~tI~p~~q~qq~i~v~~~~pF~~~P~l~is 139 (273)
T 3hs8_A 64 EFRQNLGRMFIFYGNKTSTQFLNFTPTLI--CADDLQTNLNL-QTKPVD-PTVDGGAQVQQVVNIECISDFTEAPVLNIQ 139 (273)
T ss_dssp EEETTEEEEEEEEEECSSSCBBSCCCEEE--CCTTHHHHEEE-EECCCC-SCBCTTCEEEEEEEEEECSCCCCCCEEEEE
T ss_pred EEeCceEEEEEEEEcCCCCcceeEEEEEE--CCCCCCcceEE-EecCCC-CeECCCCEEEEEEEEEEcccccCCCEEEEE
Confidence 57788999999999999999999877544 4331 1222 111122 579999999999999999876667778888
Q ss_pred EEc
Q 013597 174 YSD 176 (439)
Q Consensus 174 Y~~ 176 (439)
|..
T Consensus 140 f~~ 142 (273)
T 3hs8_A 140 FRY 142 (273)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 55
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=24.26 E-value=2.7e+02 Score=22.35 Aligned_cols=50 Identities=14% Similarity=0.086 Sum_probs=30.0
Q ss_pred EEEEEEEeCCCCCcccEEEE-----------EEeCCCCCcceEEEecccceeecccCCCCeeEEEE
Q 013597 346 LLKLKLTNQTDKEQGPFEIW-----------LSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHL 400 (439)
Q Consensus 346 ~v~~~v~N~s~r~~~~l~l~-----------l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L 400 (439)
.++++|+|.-||+. +|- |+.+.. .+.+.-.+=+++-.+ +.+||+++++.|
T Consensus 21 ~~~l~V~NtGDRPI---QVGSHyHF~E~N~aL~FDR~-~A~G~RLdIpAGTav-RFEPG~~r~V~L 81 (101)
T 4ep8_B 21 TCRVVVENHGDRPI---QVGSHYHFAEVNPALKFDRQ-QAAGYRLNIPAGTAV-RFEPGQKREVEL 81 (101)
T ss_dssp EEEEEEEECSSSCE---EEETTSCGGGSCTTEESCTT-TTTTEEECSSTTCEE-EECTTCEEEEEE
T ss_pred EEEEEEEeCCCcce---EEccccChhHcCcceeecHh-hccCceecccCCCeE-eeCCCCeEEEEE
Confidence 67888999999973 342 222221 234454444444444 568888887766
No 56
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=23.31 E-value=1.4e+02 Score=29.17 Aligned_cols=63 Identities=10% Similarity=0.055 Sum_probs=42.0
Q ss_pred cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCC-----eeEeccCCCCCCccccCCCCeeeEEEEEEccc
Q 013597 93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDK-----QRILLLDTSKSPVESIRAGGRYDFIVEHDVKE 162 (439)
Q Consensus 93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s-----~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke 162 (439)
.||.+.+||.-+..|.+.|.+..+++=-.+ -+... .++... ..-+.|.||++.+..+...++.
T Consensus 38 dFg~v~~~~~~~~~l~i~N~g~~pa~f~f~---~~~~~~~~~~~wl~v~----p~~g~l~Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 38 VFENVKFRQLQKEKFQISNNGQVPCHFSFI---PKLNDSQYCKPWLRAE----PFEGYLEPNETVDISLDVYVSK 105 (366)
T ss_dssp EEEEECBTCCEEEEEEEEECSSSCEEEEEE---CCTTCSSSSCTTEEEE----SCEEEECTTCEEEEEEEECBCT
T ss_pred EeeeeeeCCeEEEEEEEEecCCceEEEEEE---eCCCCCCCCCCcEEEe----CCccEECCCCEEEEEEEEEECH
Confidence 599999999999999999998876642211 11111 112221 1245788999888888877766
No 57
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=22.07 E-value=1.9e+02 Score=26.28 Aligned_cols=49 Identities=12% Similarity=0.114 Sum_probs=23.7
Q ss_pred EEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEE
Q 013597 347 LKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHL 400 (439)
Q Consensus 347 v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L 400 (439)
+++.|+|..+.+.- ++.+++..+.+....|+++=+ |-+|+|++...+.+
T Consensus 30 ~sl~l~N~~~~p~L-vQsWv~~~~~~~~~pfivtPP----l~rl~p~~~q~lRI 78 (221)
T 2co7_B 30 ATLSVSNPQNYPIL-VQSSVKAADKSSPAPFLVMPP----LFRLEANQQSQLRI 78 (221)
T ss_dssp EEEEEECCSSSCEE-EEEEEEETTSSSBCSEEEESS----EEEECTTCEEEEEE
T ss_pred EEEEEEcCCCCcEE-EEEEEecCCCCccCCEEEeCC----EEEECCCCceEEEE
Confidence 45555666555544 566665543223334555532 33344554444443
No 58
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=21.96 E-value=3.3e+02 Score=22.26 Aligned_cols=77 Identities=5% Similarity=-0.025 Sum_probs=47.0
Q ss_pred cccccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCce
Q 013597 87 LLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAH 166 (439)
Q Consensus 87 ~L~LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h 166 (439)
-|.||-|. =-||.|..-+.|.|.-... +.+++.|... ..+...... ..-.-|.+++. ..+.++++-+|+.
T Consensus 11 ~l~lPysv---~rgE~~~~~~~V~nyl~~~---~~v~v~L~~s-~~~~~~~~~-~~t~Clc~~~~--~t~~W~i~~lg~v 80 (118)
T 3es6_B 11 NFDIPKSV---RPNDEVTAVLAVQTELKEC---MVVKTYLISS-IPLQGAFNY-KYTACLCDDNP--KTFYWDFYTNRTV 80 (118)
T ss_dssp CCCCCSEE---CSSCCEEEEEEEEECCSSC---EEEEEEEEES-SCCCSGGGC-EEEEEECSSSC--EEEEEEECCSSCE
T ss_pred EeeCCceE---ecCCEEEEEEEEEecccce---EEEEEEecCC-cCEEccCCC-cccEEecCCCc--eEEEEEEEeCCeE
Confidence 47788764 4599999999999998754 4556666432 222111100 00112445543 4566677888988
Q ss_pred EEEEEEE
Q 013597 167 TLVCTAL 173 (439)
Q Consensus 167 ~L~c~Vs 173 (439)
.+.+++.
T Consensus 81 niTvsAe 87 (118)
T 3es6_B 81 QIAAVVD 87 (118)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8887765
No 59
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=21.58 E-value=2.6e+02 Score=22.48 Aligned_cols=59 Identities=14% Similarity=0.195 Sum_probs=40.0
Q ss_pred EEEEEEEcCCCcceEEEEEEEEEeCCCe-eEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEE
Q 013597 104 CSYISINNSSTLEVRDVVIKAEIQTDKQ-RILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCT 171 (439)
Q Consensus 104 s~~i~v~N~s~~~v~~V~ikaelqT~s~-r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~ 171 (439)
+|.+.+.|.++..| .+|+ +|.+. +.... ...+-++||++.+..|.+.=.+...|-+.+.
T Consensus 18 ~~~l~L~N~t~~~v---aFKV--KtT~p~~y~Vr----P~~G~I~P~~~~~i~I~~q~~~~~~dKflvq 77 (109)
T 1row_A 18 SSTHKLVNGGAEKI---VFKI--KSSNNNEYRIA----PVFGFVDPSGSKDVVITRTAGAPKEDKLVVH 77 (109)
T ss_dssp EEEEEEEECSSSCE---EEEE--EESCSSSEEEE----CSEEEECTTEEEEEEEEECSCCCEEEEEEEE
T ss_pred eEEEEEEcCCCCeE---EEEE--EeCCCCceEEc----CCceEECCCCeEEEEEEeCCCCCCCCEEEEE
Confidence 59999999988643 5554 34432 22221 1256799999999999888766667766554
No 60
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=21.12 E-value=60 Score=27.24 Aligned_cols=61 Identities=16% Similarity=0.114 Sum_probs=32.0
Q ss_pred EEEEEEEeCCCCCcccEEEE-----------EEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCc
Q 013597 346 LLKLKLTNQTDKEQGPFEIW-----------LSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITG 414 (439)
Q Consensus 346 ~v~~~v~N~s~r~~~~l~l~-----------l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isg 414 (439)
.++++|+|.-||+. +|- |+.+.. .+.+.-.+=+.+-.+ +.+||+++++.| +|+. |-+.|.|
T Consensus 27 ~~~l~V~NtGDRPI---QVGSHyHF~E~N~aL~FDR~-~A~G~RLdIpAGTav-RFEPG~~k~V~L--V~~~-G~r~v~G 98 (126)
T 4ubp_B 27 KTTIRVSNTGDRPI---QVGSHIHFVEVNKELLFDRA-EGIGRRLNIPSGTAA-RFEPGEEMEVEL--TELG-GNREVFG 98 (126)
T ss_dssp EEEEEEEECSSSCE---EEETTSCGGGSCTTEESCGG-GGTTEEECSCTTCEE-EECTTCEEEEEE--EECC-TTCEECS
T ss_pred EEEEEEEeCCCCCE---EEccccchhhcCchhhccHh-hhcCccccccCCCeE-eeCCCCeEEEEE--EEcc-CCeEEeC
Confidence 57888999999963 342 111110 122333332222233 457777776655 5554 6565555
No 61
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=21.12 E-value=60 Score=27.24 Aligned_cols=61 Identities=16% Similarity=0.114 Sum_probs=32.0
Q ss_pred EEEEEEEeCCCCCcccEEEE-----------EEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCc
Q 013597 346 LLKLKLTNQTDKEQGPFEIW-----------LSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITG 414 (439)
Q Consensus 346 ~v~~~v~N~s~r~~~~l~l~-----------l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isg 414 (439)
.++++|+|.-||+. +|- |+.+.. .+.+.-.+=+.+-.+ +.+||+++++.| +|+. |-+.|.|
T Consensus 27 ~~~l~V~NtGDRPI---QVGSHyHF~E~N~aL~FDR~-~A~G~RLdIpAGTav-RFEPG~~k~V~L--V~~~-G~r~v~G 98 (126)
T 4ac7_B 27 KTTIRVSNTGDRPI---QVGSHIHFVEVNKELLFDRA-EGIGRRLNIPSGTAA-RFEPGEEMEVEL--TELG-GNREVFG 98 (126)
T ss_dssp EEEEEEEECSSSCE---EEETTSCGGGSCTTEESCGG-GGTTEEECSCTTCEE-EECTTCEEEEEE--EECC-TTCEECS
T ss_pred EEEEEEEeCCCCCE---EEccccchhhcCchhhccHh-hhcCccccccCCCeE-eeCCCCeEEEEE--EEcc-CCeEEeC
Confidence 57888999999963 342 111110 122333332222233 457777776655 5554 6565555
No 62
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=20.55 E-value=87 Score=26.09 Aligned_cols=78 Identities=13% Similarity=0.097 Sum_probs=53.3
Q ss_pred ceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEcc--cc-----CceEE
Q 013597 96 AIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVK--EL-----GAHTL 168 (439)
Q Consensus 96 ~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lk--e~-----G~h~L 168 (439)
+..-|++......|.|.-........++..+..+.+--.+..+ ..++.|++|++....+...+- .. |.|.+
T Consensus 11 ~p~~g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~vgt--~tv~~LaaG~s~t~~v~~~~~~~~~~~a~~Gsy~v 88 (122)
T 2kut_A 11 TPFEGEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGR--DTISRIPVGGTGLARVQWKATRKLAGRAANPGVPV 88 (122)
T ss_dssp SCCTTCEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCCBC--CCCSCBCTTCEEECCEEEECCCCCSSCCSCCCCCC
T ss_pred CCCCCCeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEEee--EEccccCCCCeEEEEEEEecCCcccccccCceEEE
Confidence 4577999999999999988777776666666554332222222 236789999988755555543 43 99999
Q ss_pred EEEEEEE
Q 013597 169 VCTALYS 175 (439)
Q Consensus 169 ~c~VsY~ 175 (439)
...|...
T Consensus 89 ~AvVD~~ 95 (122)
T 2kut_A 89 YAVVDPD 95 (122)
T ss_dssp CEEECCT
T ss_pred EEEEcCC
Confidence 8887554
Done!