Your job contains 1 sequence.
>013602
MSQLKQMSHLDNIPSTPGKFKMDKSPYFNRLRFHSSLAKLTFWSFIFLAVILIFFFRSPS
SNPLPSADPSRRSLRTYDWGGPAFEKRVRSSARVRARNGISVLVTGAAGFVGTHVSAALK
RRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMH
LAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKVPFSE
KDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDIL
NRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGRAQLRVFNLGN
TSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGL
KKFVRWYLSYYAGGKKAAG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013602
(439 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 1809 1.5e-186 1
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 1790 1.5e-184 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 1769 2.6e-182 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 1549 5.3e-159 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 1395 1.1e-142 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 1365 1.7e-139 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 788 2.3e-78 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 780 1.6e-77 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 780 1.6e-77 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 769 2.4e-76 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 721 2.9e-71 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 721 2.9e-71 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 658 1.4e-64 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 318 1.5e-28 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 318 1.5e-28 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 293 6.6e-26 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 293 6.6e-26 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 292 8.4e-26 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 250 8.4e-25 2
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 279 2.0e-24 1
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 274 6.8e-24 1
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 273 8.7e-24 1
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 273 8.7e-24 1
UNIPROTKB|Q4QRB0 - symbol:Gale "Gale protein" species:101... 271 1.5e-23 1
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 270 2.1e-23 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 269 2.7e-23 1
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 268 3.5e-23 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 268 3.5e-23 1
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 268 3.5e-23 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 267 4.7e-23 1
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 266 6.2e-23 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 258 5.5e-22 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 249 6.0e-21 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 248 7.8e-21 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 248 7.8e-21 1
RGD|621493 - symbol:Gale "UDP-galactose-4-epimerase" spec... 253 8.4e-21 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 249 3.0e-20 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 246 5.3e-20 1
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 247 1.6e-19 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 236 5.5e-19 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 237 1.1e-18 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 227 1.9e-18 1
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 239 2.3e-18 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 239 3.4e-18 1
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 237 4.0e-18 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 234 5.8e-18 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 235 8.5e-18 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 234 9.7e-18 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 232 2.1e-17 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 232 2.1e-17 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 240 2.2e-17 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 231 2.7e-17 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 230 3.7e-17 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 225 5.0e-17 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 228 5.7e-17 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 223 1.2e-16 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 225 1.3e-16 1
TAIR|locus:2014235 - symbol:RHD1 "ROOT HAIR DEFECTIVE 1" ... 225 1.4e-16 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 225 1.6e-16 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 232 1.8e-16 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 217 3.4e-16 2
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 224 4.7e-16 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 216 9.2e-16 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 199 1.1e-15 2
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 221 1.2e-15 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 217 1.5e-15 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 215 1.9e-15 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 215 1.9e-15 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 222 2.5e-15 1
CGD|CAL0000448 - symbol:GAL10 species:5476 "Candida albic... 222 2.5e-15 1
UNIPROTKB|Q59VY6 - symbol:GAL10 "Putative uncharacterized... 222 2.5e-15 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 213 4.2e-15 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 211 7.2e-15 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 202 7.8e-15 2
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 208 8.6e-15 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 209 9.8e-15 1
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 193 1.1e-14 1
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 193 1.1e-14 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 209 1.5e-14 1
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 205 3.3e-14 1
POMBASE|SPBPB2B2.12c - symbol:gal10 species:4896 "Schizos... 210 6.3e-14 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 200 9.0e-14 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 127 1.2e-13 2
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 196 3.9e-13 1
UNIPROTKB|Q0C421 - symbol:HNE_0794 "Putative GDP-6-deoxy-... 194 5.3e-13 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 195 5.3e-13 1
UNIPROTKB|Q5QPP4 - symbol:GALE "UDP-glucose 4-epimerase" ... 162 5.5e-13 2
UNIPROTKB|G4MX57 - symbol:MGG_08012 "UDP-glucose 4-epimer... 152 5.7e-13 2
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 122 9.3e-13 2
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 193 1.0e-12 1
POMBASE|SPBC365.14c - symbol:uge1 "UDP-glucose 4-epimeras... 192 1.3e-12 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 189 1.6e-12 1
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 190 2.8e-12 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 186 6.1e-12 1
SGD|S000000223 - symbol:GAL10 "UDP-glucose-4-epimerase" s... 192 6.2e-12 1
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 184 7.6e-12 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 184 7.6e-12 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 120 1.4e-11 2
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 182 1.5e-11 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 181 1.5e-11 1
WARNING: Descriptions of 104 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 1809 (641.9 bits), Expect = 1.5e-186, P = 1.5e-186
Identities = 355/436 (81%), Positives = 373/436 (85%)
Query: 4 LKQMSHLDNIPSTPGKFKMDKSPYFNRLRFHSSLAKLTFWSXXXXXXXXXXXXRSP-SSN 62
+KQMSHLD+IPSTPGKFK PYF+R R+ SS+AKL FWS RSP SSN
Sbjct: 1 MKQMSHLDDIPSTPGKFK----PYFHRTRWQSSVAKLAFWSLVFVGLIFIFFYRSPVSSN 56
Query: 63 PLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRR 122
P ADPSRRSLRTY WGGPA+EK G SVLVTGAAGFVGTHVSAALKRR
Sbjct: 57 P---ADPSRRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRR 113
Query: 123 GDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLA 182
GDGVLGLDNFNDYYDPSLK+ARQALLERSG+F+VEGDIND ALLKKLF+VV FTHVMHLA
Sbjct: 114 GDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLA 173
Query: 183 AQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKVPFSEKD 242
AQAGVRYAM+NP+SYVHSNIAG V+LLEVCK+ANPQPAIVWASSSSVYGLNTKVPFSEKD
Sbjct: 174 AQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKD 233
Query: 243 RTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNR 302
RTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDIL
Sbjct: 234 RTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKG 293
Query: 303 KSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTS 362
K+I IFE +HGTVARDFTYIDDIVKGCL ALDTAE AQLRVFNLGNTS
Sbjct: 294 KAISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTS 353
Query: 363 PVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKK 422
PVPV+DLV+ILERLLKVKAKRNIMKLPRNGDV FTHANIS AQRELGYKPTTDLQTGLKK
Sbjct: 354 PVPVTDLVTILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKK 413
Query: 423 FVRWYLSYYAGGKKAA 438
F RWYL YY GGKKAA
Sbjct: 414 FARWYLGYYNGGKKAA 429
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 1790 (635.2 bits), Expect = 1.5e-184, P = 1.5e-184
Identities = 351/435 (80%), Positives = 372/435 (85%)
Query: 7 MSHLDNIPSTPGKFKM-DKSPYF-NRLRFHSSLAKLTFWSXXXXXXXXXXXXRSPSSNPL 64
MSHLD+IPSTPGKFKM DKSP+F +R R+ SS+AKL FWS RSP SNP
Sbjct: 1 MSHLDDIPSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNP- 59
Query: 65 PSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGD 124
D SRRSLRTY WGGPA+EK NG+SVLVTGAAGFVGTHVSAALKRRGD
Sbjct: 60 ---DSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGD 116
Query: 125 GVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQ 184
GVLGLDNFNDYYD SLK++RQALLERSG+FIVEGDIND++LLKKLF+VV FTHVMHLAAQ
Sbjct: 117 GVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQ 176
Query: 185 AGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKVPFSEKDRT 244
AGVRYAM+NP SYVHSNIAG V+LLEVCK+ANPQPAIVWASSSSVYGLNTKVPFSEKDRT
Sbjct: 177 AGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRT 236
Query: 245 DQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKS 304
DQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDIL K+
Sbjct: 237 DQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKA 296
Query: 305 IPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPV 364
I IFE +HGTVARDFTYIDDIVKGCL ALDTAE AQLRVFNLGNTSPV
Sbjct: 297 ISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPV 356
Query: 365 PVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFV 424
PV+DLVSILERLLKVKAKRN+MKLPRNGDVPFTHANIS AQRE GYKP+TDLQTGLKKFV
Sbjct: 357 PVTDLVSILERLLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFV 416
Query: 425 RWYLSYYA-GGKKAA 438
RWYL YY GGKK A
Sbjct: 417 RWYLGYYKQGGKKVA 431
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 1769 (627.8 bits), Expect = 2.6e-182, P = 2.6e-182
Identities = 345/435 (79%), Positives = 373/435 (85%)
Query: 7 MSHLDNIPSTPGKFKMDKSPYFNRLRFHSSLAKLTFWSXXXXXXXXXXXXRSPSS-NPLP 65
MS LD+IPS+PGKFKM+KS Y +RLRF SSL K F+S RSP S NP
Sbjct: 1 MSRLDDIPSSPGKFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPSS 60
Query: 66 SADPSRRSLRTYDWGGPAFEKXXXXXXX--XXXXNGISVLVTGAAGFVGTHVSAALKRRG 123
+DPSRRSLRT +GGPA+EK NGI+VLVTGAAGFVGTHVSAALKRRG
Sbjct: 61 PSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRG 120
Query: 124 DGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAA 183
DGV+GLDNFNDYYDPSLK+AR+ALLERSGIFIVEGDIND+ LL+KLF +VSFTHVMHLAA
Sbjct: 121 DGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAA 180
Query: 184 QAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKVPFSEKDR 243
QAGVRYAM+NP+SYVHSNIAG V+LLE+CK+ NPQPAIVWASSSSVYGLNTKVPFSEKD+
Sbjct: 181 QAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDK 240
Query: 244 TDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRK 303
TDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFT+DIL K
Sbjct: 241 TDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGK 300
Query: 304 SIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSP 363
SI IFES +HGTVARDFTYIDDIVKGCLAALDTAE AQLRVFNLGNTSP
Sbjct: 301 SISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSP 360
Query: 364 VPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKF 423
VPVSDLV ILER LKVKAK+N++K+PRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKF
Sbjct: 361 VPVSDLVRILERQLKVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKF 420
Query: 424 VRWYLSYYAGGKKAA 438
VRWYLSYY+G KKAA
Sbjct: 421 VRWYLSYYSGDKKAA 435
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 1549 (550.3 bits), Expect = 5.3e-159, P = 5.3e-159
Identities = 300/432 (69%), Positives = 338/432 (78%)
Query: 7 MSHLDNIPSTPGKFKMDKSPYFNRLRFHS--SLAKLTFWSXXXXXXXXXXXXRSPSSNPL 64
MSHLD++PSTPGK+K DK P + L H L+KLT W+ SP +P
Sbjct: 1 MSHLDDLPSTPGKYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSPS 60
Query: 65 PSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGD 124
S+ +GG +EK G++VLVTGA+GFVGTHVS AL+RRGD
Sbjct: 61 RRNLNDSSSISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGD 120
Query: 125 GVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQ 184
GVLGLDNFN YYDP LK+ARQ LLERSG+F+VEGDIND LL+KLFDVV FTHVMHLAAQ
Sbjct: 121 GVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQ 180
Query: 185 AGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKVPFSEKDRT 244
AGVRYAMQNP SYV+SNIAG V+LLEV K+ANPQPAIVWASSSSVYGLN+KVPFSEKDRT
Sbjct: 181 AGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRT 240
Query: 245 DQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKS 304
DQPASLYAATKKAGE IAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFT+DIL K+
Sbjct: 241 DQPASLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKT 300
Query: 305 IPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPV 364
I +FESPD G+VARDFTYIDDIVKGCL ALDTAE A R++NLGNTSPV
Sbjct: 301 ITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPV 360
Query: 365 PVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFV 424
PV+ LV+ILE+LLK+KAK+ IM LPRNGDV FTHANI+LAQ ELGYKP DL+TGLKKFV
Sbjct: 361 PVTKLVTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFV 420
Query: 425 RWYLSYYAGGKK 436
+WY+ +Y G KK
Sbjct: 421 KWYMGFYTGSKK 432
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 1395 (496.1 bits), Expect = 1.1e-142, P = 1.1e-142
Identities = 280/426 (65%), Positives = 318/426 (74%)
Query: 14 PSTPGKFKMDKSPYFNRL--RFHSSLAKLTFWSXXXXXXXXXXXXRSPSSNPLPSADPSR 71
PSTPGKFK+D+S NR R +S + + W+ S S D
Sbjct: 10 PSTPGKFKIDRS---NRQLHRCFASTSTMFLWALFLIALTASYL--SFQS----FVDSGS 60
Query: 72 RSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDN 131
R L T WGG +EK GISVLVTGA GFVG+HVS AL++RGDGV+GLDN
Sbjct: 61 RYL-TASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDN 119
Query: 132 FNDYYDPSLKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAM 191
FN+YYDPSLK+AR++LL GIF+VEGD+ND LL KLFDVV+FTHVMHLAAQAGVRYA+
Sbjct: 120 FNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYAL 179
Query: 192 QNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLY 251
+NP SYVHSNIAGLV+LLE+CK ANPQPAIVWASSSSVYGLN KVPFSE DRTDQPASLY
Sbjct: 180 ENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLY 239
Query: 252 AATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESP 311
AATKKAGEEI HTYNHIYGL++TGLRFFTVYGPWGRPDMAYF FTR+IL K I I+
Sbjct: 240 AATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGK 299
Query: 312 DHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVS 371
+ +ARDFTYIDDIVKGCL +LD++ A R+FNLGNTSPV V LV
Sbjct: 300 NRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVD 359
Query: 372 ILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 431
ILE+ LKVKAKRN +++P NGDVPFTHANIS A+ E GYKPTTDL+TGLKKFVRWYLSYY
Sbjct: 360 ILEKHLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSYY 419
Query: 432 AGGKKA 437
KA
Sbjct: 420 GYNTKA 425
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 1365 (485.6 bits), Expect = 1.7e-139, P = 1.7e-139
Identities = 258/352 (73%), Positives = 295/352 (83%)
Query: 80 GGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPS 139
GG A+EK +G+SVLVTGAAGFVG+H S AL++RGDGVLG DNFNDYYDPS
Sbjct: 92 GGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPS 151
Query: 140 LKKARQALLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVH 199
LK+ARQ LLE+ +FIVEGD+ND LL+KLFDVV FTH++HLAAQAGVRYAM+NP SY+
Sbjct: 152 LKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIA 211
Query: 200 SNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGE 259
SNIAG V+LLEV K ANPQPAIVWASSSSVYGLNT+ PFSE+ RTDQPASLYAATKKAGE
Sbjct: 212 SNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGE 271
Query: 260 EIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARD 319
EIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFT+DIL+ KSI I+ + D+ VARD
Sbjct: 272 EIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARD 331
Query: 320 FTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKV 379
FTYIDDIVKGC+ ALDTAE AQLRV+NLGNTSPVPV LVSILE LL
Sbjct: 332 FTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGT 391
Query: 380 KAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 431
KAK++++K+PRNGDVP+THAN+SLA ++ GYKPTTDL GL+KFV+WY+ YY
Sbjct: 392 KAKKHLIKMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGYY 443
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 161/336 (47%), Positives = 221/336 (65%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG-DIN 161
LVTG AGF+G H++ L RGD +LGLDN NDYYD +LK+AR A L+ F D+
Sbjct: 9 LVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKLDLA 68
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
D + LF F V+HLAAQAGVRY++ NP +YV SN+ G +LE C++ + + +
Sbjct: 69 DRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSVKH-L 127
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 281
V+ASSSSVYG N K PFSE D D P +LYAA+KKA E +AH+Y H++ L TGLRFFTV
Sbjct: 128 VFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLFQLPCTGLRFFTV 187
Query: 282 YGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD-----T 336
YGPWGRPDMA F FTR++L K I ++ +HG ++RDFTYIDDIV G L LD
Sbjct: 188 YGPWGRPDMALFKFTRNLLADKPIDVY---NHGKMSRDFTYIDDIVDGILLTLDHPPEPN 244
Query: 337 AEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPF 396
+ A R++N+G+ +P+ +++ ++ILE+ L KA +N + L + GDVP
Sbjct: 245 SAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKAIKNFLPL-QPGDVPE 303
Query: 397 THANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYA 432
T+A++S +++ Y+P T LQ G+K FV WYL Y++
Sbjct: 304 TYADVSQLEKDFQYRPRTPLQKGVKNFVEWYLQYFS 339
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 164/336 (48%), Positives = 220/336 (65%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLER-SGIFIVEGDIN 161
LVTGAAGF+G +VS L G V+G+DN NDYYD +LK AR A LE S ++ D+
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLDLA 63
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
D + KLF F V+HLAAQAGVRY++ NP +Y SN+ G +++LE C++ + +
Sbjct: 64 DREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEH-L 122
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 281
V+ASSSSVYGLN K+PFS +D D P SLYAATKKA E ++HTY+H+Y L TGLRFFTV
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 282 YGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD-----T 336
YGPWGRPDMA F FT+ IL ++I ++ +HG ++RDFTYIDDIV+G + D T
Sbjct: 183 YGPWGRPDMALFKFTKAILAGETIDVY---NHGDLSRDFTYIDDIVEGIIRVQDKPPSPT 239
Query: 337 AEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPF 396
+ A RVFN+GN SPV + D ++ LER L ++AK+ + + + GDV
Sbjct: 240 PDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPM-QPGDVHA 298
Query: 397 THANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYA 432
T A+ + +GYK D+ TG+ KFV WY ++YA
Sbjct: 299 TWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFYA 334
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 164/336 (48%), Positives = 220/336 (65%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLER-SGIFIVEGDIN 161
LVTGAAGF+G +VS L G V+G+DN NDYYD +LK AR A LE S ++ D+
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLDLA 63
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
D + KLF F V+HLAAQAGVRY++ NP +Y SN+ G +++LE C++ + +
Sbjct: 64 DREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEH-L 122
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 281
V+ASSSSVYGLN K+PFS +D D P SLYAATKKA E ++HTY+H+Y L TGLRFFTV
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 282 YGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD-----T 336
YGPWGRPDMA F FT+ IL ++I ++ +HG ++RDFTYIDDIV+G + D T
Sbjct: 183 YGPWGRPDMALFKFTKAILAGETIDVY---NHGDLSRDFTYIDDIVEGIIRVQDKPPSPT 239
Query: 337 AEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPF 396
+ A RVFN+GN SPV + D ++ LER L ++AK+ + + + GDV
Sbjct: 240 PDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPM-QPGDVHA 298
Query: 397 THANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYA 432
T A+ + +GYK D+ TG+ KFV WY ++YA
Sbjct: 299 TWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFYA 334
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 158/337 (46%), Positives = 218/337 (64%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLE-RSGIFIVEGD 159
S+LVTGAAGF+G H++ L RGD V+GLDN NDYYD +LK R LE R G V
Sbjct: 3 SILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
+ D L+ LF F V++LAAQAGVRY++ NP++YV SN+ G +++LE C++ +
Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGVKH 122
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 279
+V+ASSSSVYG NT +PFS D P SLYAATKKA E +AHTY+ +YGL TGLRFF
Sbjct: 123 -LVYASSSSVYGANTAMPFSIHHNVDHPVSLYAATKKANELMAHTYSSLYGLPTTGLRFF 181
Query: 280 TVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD-TAE 338
TVYGPWGRPDMA F FT+ IL + I ++ + G + RDFTY+DDIV+G +D T E
Sbjct: 182 TVYGPWGRPDMALFLFTKAILEGRPIDVY---NFGKMQRDFTYVDDIVEGVTRVMDRTPE 238
Query: 339 XXXXXXXXX----XXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDV 394
A R++N+GN +PV + + +E+ L + A++N++ L + GDV
Sbjct: 239 PNPAWSGARPDPGTSYAPYRIYNIGNNNPVELLAFIEAIEQNLGITAQKNLLPL-QAGDV 297
Query: 395 PFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 431
P T+A++ ++G+KP T + G+++FV WY YY
Sbjct: 298 PATYADVDDLMNDVGFKPATPIGEGIERFVEWYRGYY 334
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 149/334 (44%), Positives = 212/334 (63%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
LVTGAAGF+G+ V L G V+G+DN NDYYD +LK+AR A +E + ++ DI D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 163 MALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIV 222
++ +LF F V+HLAAQAGVRY+++NP +Y SN+ G +++LE C+N N ++
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRN-NQVKHLI 122
Query: 223 WASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVY 282
+ASSSSVYGLN KVPFS KD D P SLYAATKK+ E +AH+Y+H+Y + TGLRFFTVY
Sbjct: 123 YASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVY 182
Query: 283 GPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDT-----A 337
G WGRPDMA + FT+ ILN +I I ++G + RDFT++DDIV+G + D A
Sbjct: 183 GSWGRPDMAPYIFTKKILNGDTIDI---NNNGDMWRDFTHVDDIVEGVIRIADVIPERDA 239
Query: 338 EXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFT 397
E A V+N+G+ SP+ + D V +E L ++AK+N ++ + GDV T
Sbjct: 240 EWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREM-QPGDVYQT 298
Query: 398 HANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 431
+A+ + Y P ++ G+ + V W+ +Y
Sbjct: 299 YADTQDLFKATNYVPKISVKEGVAELVVWFKDFY 332
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 149/334 (44%), Positives = 212/334 (63%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
LVTGAAGF+G+ V L G V+G+DN NDYYD +LK+AR A +E + ++ DI D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 163 MALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIV 222
++ +LF F V+HLAAQAGVRY+++NP +Y SN+ G +++LE C+N N ++
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRN-NQVKHLI 122
Query: 223 WASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVY 282
+ASSSSVYGLN KVPFS KD D P SLYAATKK+ E +AH+Y+H+Y + TGLRFFTVY
Sbjct: 123 YASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVY 182
Query: 283 GPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDT-----A 337
G WGRPDMA + FT+ ILN +I I ++G + RDFT++DDIV+G + D A
Sbjct: 183 GSWGRPDMAPYIFTKKILNGDTIDI---NNNGDMWRDFTHVDDIVEGVIRIADVIPERDA 239
Query: 338 EXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFT 397
E A V+N+G+ SP+ + D V +E L ++AK+N ++ + GDV T
Sbjct: 240 EWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREM-QPGDVYQT 298
Query: 398 HANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 431
+A+ + Y P ++ G+ + V W+ +Y
Sbjct: 299 YADTQDLFKATNYVPKISVKEGVAELVVWFKDFY 332
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 137/336 (40%), Positives = 200/336 (59%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG- 158
+ +LVTGAAGF+G+ ++ L + G V G+D F YYDP LK+ R A L F +E
Sbjct: 1 MKILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
I D ++ +F + V+H AAQAGVRY++ +P ++ +NI G +++++ + Q
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQ 120
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRF 278
+V AS+SS YG N K PF E+D P ++YAATK A E IAH++ H+YG+ T LRF
Sbjct: 121 H-LVMASTSSAYGANQKFPFEERDSAPYPLTIYAATKLASELIAHSHAHLYGVPTTVLRF 179
Query: 279 FTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAE 338
F+VYGPWGRPDMA+F FT I + I +F +HG + RDFTYIDD+V+ +DT
Sbjct: 180 FSVYGPWGRPDMAFFLFTDKIFKGQPIDVF---NHGDLLRDFTYIDDLVEAIRRLMDTPP 236
Query: 339 XXXXXXXXXXXX---AQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVP 395
A R+ N+GN SPV + D + +E + KA++N++ + + GDV
Sbjct: 237 VVGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDM-QPGDVK 295
Query: 396 FTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 431
T A++ L GY P TD +TG+ +FV WY Y+
Sbjct: 296 QTFADVRLLDALTGYTPDTDYRTGIARFVDWYRDYF 331
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 101/342 (29%), Positives = 168/342 (49%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGI-F-IVEGDI 160
L+TG AGF+G+++ L + V+GLDNF +L + + + + F + GDI
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
D A+ + + + V + V+H AA V ++ +P + +NI G +++L+ K A + +
Sbjct: 79 RDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK-S 135
Query: 221 IVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 280
+A+SSS YG + +P E++ P S YA TK E A Y YG GLR+F
Sbjct: 136 FTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFN 194
Query: 281 VYGPWGRPDMAYFF----FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVK-GCLAALD 335
V+G P+ AY +T ++ K +F + D G +RDF YID++V+ LAA
Sbjct: 195 VFGRRQDPNGAYAAVIPKWTSSMI--KGEDVFINGD-GETSRDFCYIDNVVQMNILAATA 251
Query: 336 TAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLP-----R 390
+E A+ V+N+ ++DL ++ L N+ + P R
Sbjct: 252 ASE------------AKNEVYNVAVGDRTTLNDLYFAIKDSLNANGI-NVNQNPNYRDFR 298
Query: 391 NGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYA 432
GDV + A++S A LGY+ T + G+ + + WY + A
Sbjct: 299 AGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKEFLA 340
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 101/342 (29%), Positives = 168/342 (49%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGI-F-IVEGDI 160
L+TG AGF+G+++ L + V+GLDNF +L + + + + F + GDI
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
D A+ + + + V + V+H AA V ++ +P + +NI G +++L+ K A + +
Sbjct: 79 RDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK-S 135
Query: 221 IVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 280
+A+SSS YG + +P E++ P S YA TK E A Y YG GLR+F
Sbjct: 136 FTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFN 194
Query: 281 VYGPWGRPDMAYFF----FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVK-GCLAALD 335
V+G P+ AY +T ++ K +F + D G +RDF YID++V+ LAA
Sbjct: 195 VFGRRQDPNGAYAAVIPKWTSSMI--KGEDVFINGD-GETSRDFCYIDNVVQMNILAATA 251
Query: 336 TAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLP-----R 390
+E A+ V+N+ ++DL ++ L N+ + P R
Sbjct: 252 ASE------------AKNEVYNVAVGDRTTLNDLYFAIKDSLNANGI-NVNQNPNYRDFR 298
Query: 391 NGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYA 432
GDV + A++S A LGY+ T + G+ + + WY + A
Sbjct: 299 AGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKEFLA 340
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 95/341 (27%), Positives = 166/341 (48%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKAR-QALLER-SGIFIVEGDI 160
L+TG AGF+G+++ L V+GLDNF + + + + Q E+ + V+GDI
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 161 NDMALLKKLFDVVS--FTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
+ + +++H AA V ++ +P +NI G +++L K +
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVK 138
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRF 278
+ V+A+SSS YG + +P E D +P S YA TK E A ++ YGL+ TGLR+
Sbjct: 139 -SFVYAASSSTYGDHPALPKVE-DAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGLRY 196
Query: 279 FTVYGPWGRPDMAYFF----FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAAL 334
F V+G PD AY +T ++ + + I + D G +RDF ++++ V+ + A
Sbjct: 197 FNVFGKRQDPDGAYAAVIPKWTVAMIANEELLI--NGD-GETSRDFCFVENAVQANILAA 253
Query: 335 DTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLP----- 389
TA + +V+N+ ++ L + L+ L+ + K P
Sbjct: 254 -TANDA----------GKNQVYNVALGDRTSLNTLFNSLKVALQANGV-DYQKSPTYQDF 301
Query: 390 RNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSY 430
R GDV + A+IS A+ +G++P +Q G+ K + WY+ +
Sbjct: 302 RAGDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIKF 342
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 95/341 (27%), Positives = 166/341 (48%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKAR-QALLER-SGIFIVEGDI 160
L+TG AGF+G+++ L V+GLDNF + + + + Q E+ + V+GDI
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 161 NDMALLKKLFDVVS--FTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
+ + +++H AA V ++ +P +NI G +++L K +
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVK 138
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRF 278
+ V+A+SSS YG + +P E D +P S YA TK E A ++ YGL+ TGLR+
Sbjct: 139 -SFVYAASSSTYGDHPALPKVE-DAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGLRY 196
Query: 279 FTVYGPWGRPDMAYFF----FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAAL 334
F V+G PD AY +T ++ + + I + D G +RDF ++++ V+ + A
Sbjct: 197 FNVFGKRQDPDGAYAAVIPKWTVAMIANEELLI--NGD-GETSRDFCFVENAVQANILAA 253
Query: 335 DTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLP----- 389
TA + +V+N+ ++ L + L+ L+ + K P
Sbjct: 254 -TANDA----------GKNQVYNVALGDRTSLNTLFNSLKVALQANGV-DYQKSPTYQDF 301
Query: 390 RNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSY 430
R GDV + A+IS A+ +G++P +Q G+ K + WY+ +
Sbjct: 302 RAGDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIKF 342
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 94/341 (27%), Positives = 165/341 (48%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+LVTG AG++G+H+ L + + VL +DN + K ++A+ R+ + + GD
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLS-------KGHKKAVDTRAKLIV--GDFG 52
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
D LL ++F V+H+AAQ+ V +M P Y NI+ +SLL+V AN + +
Sbjct: 53 DENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKK-M 111
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 281
V++S+++VYG K P +E D +P ++Y +K E+ Y I+G + LR+F
Sbjct: 112 VFSSTAAVYGEPEKWPITE-DFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNA 170
Query: 282 YG--PWG------RPD--MAYFFFTRDILNRKSIPIF----ESPDHGTVARDFTYIDDIV 327
G P G P+ + F + ++ + +F +PD GT RD+ +++D+
Sbjct: 171 AGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPD-GTCIRDYIHVNDLA 229
Query: 328 KGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMK 387
+ + AL+ V+NLGN V +++ + E + VK K +
Sbjct: 230 EAHILALNKLNKDESG-----------VYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQ 278
Query: 388 LPRNGDVPFTHANISLAQRELGYKPTT-DLQTGLKKFVRWY 427
R GD A+ Q+EL + P D++T ++ W+
Sbjct: 279 R-RPGDPAVLVASSEKIQKELNFTPKFGDIKTIVQTAWEWH 318
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 250 (93.1 bits), Expect = 8.4e-25, Sum P(2) = 8.4e-25
Identities = 78/240 (32%), Positives = 120/240 (50%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLK-KARQALLERSGIFIVEGDIN 161
+VTG AGF+G+H+ L G V +DN + +L+ +A L F ++ DI
Sbjct: 7 IVTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLEHRANNPDLT----FEIK-DIC 61
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
+++ LF+ V + V H A + +++NP Y+ +N+ G V +LE + AN + +
Sbjct: 62 ELSAPHPLFENVDY--VFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKK-L 118
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 281
V+A+SSS YGL VP E D P YA +K GEE A + +YGL + +R F
Sbjct: 119 VYAASSSCYGL-ADVPTRE-DHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNA 176
Query: 282 YGPWGRPDMAY-----FFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDT 336
YG R Y FF + + ++ P F GT RDF Y+ D+ + L A +T
Sbjct: 177 YGTRVRTTGVYGAVFGVFFKQKLADK---P-FTVVGDGTQRRDFLYVTDVARAFLKAAET 232
Score = 66 (28.3 bits), Expect = 8.4e-25, Sum P(2) = 8.4e-25
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 356 FNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTD 415
+NLG +P ++ LV ++ ++ KR P G+ T A+IS +R+LG++PT
Sbjct: 239 WNLGAGNPQSINRLVELIGGEVEYIPKR-----P--GEPDCTWADISKIKRDLGWEPTIT 291
Query: 416 LQTGLKKFV 424
G+ + +
Sbjct: 292 FADGVSRMM 300
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 98/344 (28%), Positives = 161/344 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYY--DPSLKKARQALLERSG--IFIVE 157
VLVTG AG++G+H L G + +DNF++ + SL ++ + + E +G + E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
DI D L++LF SF V+H A V ++Q P Y N+ G + LLE+ K A+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAH-------TYNHIY- 269
+V++SS++VYG +P E T + Y +K EE+ T+N +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183
Query: 270 -GLSLTGLRFFTVYG--PWGRPDMAYFFFTRDILNRK-SIPIFESP---DHGTVARDFTY 322
+ TG G P G P+ + ++ + R+ ++ +F + + GT RD+ +
Sbjct: 184 RYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIH 243
Query: 323 IDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAK 382
+ D+ KG +AAL + R++NLG + V +V +E+ K
Sbjct: 244 VVDLAKGHIAALRKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293
Query: 383 RNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV +AN SLAQ ELG+ L + RW
Sbjct: 294 YKVVAR-REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRW 336
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 95/344 (27%), Positives = 160/344 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYY--DPSLKKARQALLERSG--IFIVE 157
VLVTG AG++G+H L G + +DNF++ S+ ++ Q + E +G + E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSVEFEE 64
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
DI D A L++LF+ SFT V+H A V ++Q P Y N+ G + LLE+ + A+
Sbjct: 65 MDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMR-AHG 123
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHI-YGLSLTGL 276
+V++SS++VYG +P E T + Y +K EE+ + L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKYFIEEMIRDLCQADKAWNAVLL 183
Query: 277 RFFTVYG----------PWGRPDMAYFFFTRDILNRKSI-PIFESP---DHGTVARDFTY 322
R+F G P G P+ + ++ + R+ + +F + + GT RD+ +
Sbjct: 184 RYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDYIH 243
Query: 323 IDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAK 382
+ D+ KG +AAL + R++NLG + V +V +++ +
Sbjct: 244 VVDLAKGHIAALRKLKEQ----------CGCRIYNLGTGTGYSVLQMVEAMKKASGQEIP 293
Query: 383 RNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV +AN SLA +ELG+ L + RW
Sbjct: 294 YKVVAR-REGDVAACYANPSLALKELGWTAVLGLDRMCEDLWRW 336
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 104/355 (29%), Positives = 161/355 (45%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNF-NDYYDP-SLKKARQAL--LERSGIFIVE 157
+LVTG AG++G+H L G + +DN N P +L ++ Q + + ++ I E
Sbjct: 9 ILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPIAFQE 68
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
DI D A L+KLF F+ VMH A V +++ P Y + N+ G + LLE + A
Sbjct: 69 LDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAME-AYS 127
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEE-IAHTYNHIYGLSLTGL 276
IV++SS++VYG +P EK + Y +K EE I G + L
Sbjct: 128 VRNIVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKSKYFIEEMIQDLCKAEKGWNAILL 187
Query: 277 RFFTVYG----------PWGRPDMAYFFFTRDILNRKS-IPIF----ESPDHGTVARDFT 321
R+F G P G P+ + + + R+ + +F E+ D GT RD+
Sbjct: 188 RYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGNDYETAD-GTGIRDYI 246
Query: 322 YIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKA 381
++ D+ KG +AAL + +++NLG + V +V +E+ +
Sbjct: 247 HVVDLAKGHIAALKKLKEN----------CGCKIYNLGTGTGYSVLQMVQAMEKASGREI 296
Query: 382 KRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYAGGKK 436
K I R GDV +AN LA+RELG+K L + RW L G K
Sbjct: 297 KYKITGR-REGDVAACYANPELAERELGWKAAFGLDKMCEDLWRWQLQNPTGYSK 350
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 99/354 (27%), Positives = 165/354 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNF------NDYYDPSLKKARQALLERSGIFI 155
+LVTGAAGF+G+H L G VL +DNF D + ++ R A L +
Sbjct: 3 ILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDVPF 62
Query: 156 VEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNA 215
D+ D A L+K+F F ++HLAA V ++ P Y +N+ ++L+++C
Sbjct: 63 QNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKY 122
Query: 216 NPQPAIVWASSSSVYGLNTKVPFSEKDRTDQP-ASLYAATKKAGEEI---AHTYNHIYGL 271
N + V++SS++VYG +++P +EK +T Q + Y TK E+I N + +
Sbjct: 123 NVKN-FVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNV 181
Query: 272 SLTGLRFFTVYG----------PWGRPDMAYFFFTRDILNRKSIPI-------FESPDHG 314
L LR+F G P G P+ + ++ + + +P+ F++ D G
Sbjct: 182 VL--LRYFNPVGAHKSGLIGEDPKGVPNNLMPYVSQVAIGK--LPVLTIYGDQFDTVD-G 236
Query: 315 TVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILE 374
T RD+ ++ D+ KG + A D + ++NLG V +V L+
Sbjct: 237 TGVRDYIHVVDLAKGHVKAFDRIKTVGNIGT--------EIYNLGTGVGYSVRQMVDALK 288
Query: 375 RLLKVKAKRNIMKL--PRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
KV + +K+ PR GDV + + SLAQ +LG++ T L+ W
Sbjct: 289 ---KVSGRDIPVKIGVPRPGDVASVYCDPSLAQEKLGWRAETGLEEMCADLWNW 339
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 271 (100.5 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 94/344 (27%), Positives = 159/344 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYY--DPSLKKARQALLERSG--IFIVE 157
VLVTG AG++G+H L G + +DNF++ + S+ ++ + + E +G + E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
DI D A L+ LF +F V+H A V ++Q P Y N+ G + LLE+ + A+
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-AHG 123
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHI-YGLSLTGL 276
++V++SS++VYG +P E T + Y +K EE+ + L
Sbjct: 124 VKSLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCRADTAWNAVLL 183
Query: 277 RFFTVYG----------PWGRPDMAYFFFTRDILNRK-SIPIFE---SPDHGTVARDFTY 322
R+F G P G P+ + ++ + R+ ++ +F + + GT RD+ +
Sbjct: 184 RYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIH 243
Query: 323 IDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAK 382
+ D+ KG +AAL + R++NLG + V +V +E+ K
Sbjct: 244 VVDLAKGHIAALKKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293
Query: 383 RNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV +AN SLA ELG+ L + RW
Sbjct: 294 YKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 336
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 270 (100.1 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 95/344 (27%), Positives = 158/344 (45%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYY--DPSLKKARQALLERSG--IFIVE 157
VLVTG AG++G+H L G + +DNF++ S+ ++ + + E +G + E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSVEFEE 64
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
DI D A L++LF F V+H A V ++Q P Y N+ G + LLE+ K A+
Sbjct: 65 MDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHI-YGLSLTGL 276
+V++SS++VYG +P E T + Y +K EE+ + L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLL 183
Query: 277 RFFTVYG----------PWGRPDMAYFFFTRDILNRK-SIPIFESP---DHGTVARDFTY 322
R+F G P G P+ + ++ + R+ ++ +F + + GT RD+ +
Sbjct: 184 RYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIH 243
Query: 323 IDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAK 382
+ D+ KG +AAL + R++NLG + V +V +E+ K
Sbjct: 244 VVDLAKGHIAALRKLKEQ----------CGCRIYNLGTGTGYSVLQMVRAMEKASGKKIP 293
Query: 383 RNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV +AN SLA +ELG+ L + RW
Sbjct: 294 YKVVAR-REGDVAACYANPSLALKELGWTAALGLDRMCEDLWRW 336
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 269 (99.8 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 97/320 (30%), Positives = 149/320 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
VLVTG GF+G+H+ AL +G V +DN ++ +LK ++ LE I+ G++
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSLENLKCGQRDKLE-----IINGNLT 58
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
D LL V V HLAA A V+ + ++ + +N +LLE + N +
Sbjct: 59 DKFLLDSA--VKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRR-NRVDRL 115
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 281
V+ASS++VYG + E P SLY A+K AGE + Y+H+YGL T RF +
Sbjct: 116 VFASSAAVYGESGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFANI 175
Query: 282 YGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXX 341
G + Y F +R N S+ + G+ ++ + ++ D V G L + +
Sbjct: 176 VGSRRHSGVIYDFVSRLRQNPSSLLVLGD---GSQSKPYLHVSDCVAGMLLGFEKS---- 228
Query: 342 XXXXXXXXXAQLRVFNLGNTSPVPVSDLVSIL--ERLLK-VKAKRNIMKLPRNGDVPFTH 398
L ++NLG V V D+ ++ E LK V + + GD P
Sbjct: 229 --------TKNLGLYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVR 280
Query: 399 ANISLAQRELGYKPT-TDLQ 417
+IS R LG+KP T LQ
Sbjct: 281 FDISRI-RTLGFKPKFTSLQ 299
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 268 (99.4 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 98/345 (28%), Positives = 155/345 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYD-----PSLKKARQALLERSGIFIV 156
VLVTG AG++G+H L G + +DNF++ P + Q L RS F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSVEF-E 63
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
E DI D A L++LF SF V+H A V ++Q P Y N+ G + LLE+ + A+
Sbjct: 64 EMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-AH 122
Query: 217 PQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHI-YGLSLTG 275
+V++SS++VYG +P E T + Y +K EE+ +
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVL 182
Query: 276 LRFFTVYG----------PWGRPDMAYFFFTRDILNRKSI-PIFESP---DHGTVARDFT 321
LR+F G P G P+ + ++ + R+ + +F + + GT RD+
Sbjct: 183 LRYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRDYI 242
Query: 322 YIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKA 381
++ D+ KG +AAL + R++NLG + V +V +E+ K
Sbjct: 243 HVVDLAKGHIAALRKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292
Query: 382 KRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV +AN SLA +ELG+ L + RW
Sbjct: 293 PYKVVAR-REGDVAACYANPSLALKELGWSAALGLDRMCEDLWRW 336
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 268 (99.4 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 101/345 (29%), Positives = 154/345 (44%)
Query: 99 GISVLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLE-RSGIFIV 156
G +V G AG +G+H V L+ V+ DNF + + QAL + R+ I+ +
Sbjct: 6 GKKFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNF---VRGTRENLAQALRDPRTKIYDI 62
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
GDIN +L V V H AA + + P S +NI G ++LE C A
Sbjct: 63 GGDINQTDILNTALKGVD--GVFHFAA-LWLLQCYEYPRSAFQTNIQGTFNVLETCV-AQ 118
Query: 217 PQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGL 276
+V++SS+SVYG + P +E + + Y ATK AGE +A Y+H YGL GL
Sbjct: 119 GVKRLVFSSSASVYGDALEEPMTEAHPFNS-RTFYGATKIAGEAMATAYHHRYGLPFVGL 177
Query: 277 RFFTVYGPWGRPDM--AYFFFTRDILNR--KSIPIFESPDHGTVARDFTYIDDIVKGCLA 332
R+ VYGP R D AY +L+ K P+ D G+ A DF Y++D +
Sbjct: 178 RYMNVYGP--RQDYRGAYIAVIMKMLDALDKGQPMTLYGD-GSQAYDFVYVEDCAAANIC 234
Query: 333 AL--DTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPR 390
A+ DT + +N+G + +L ++++ NI LP+
Sbjct: 235 AMKADTVD---------------EYYNVGTGKRTSILELAKEIQKI--TGTSDNIQFLPQ 277
Query: 391 NGDVPFTHANISL---AQRELGYKPTTDLQTGLKKFVRWYLSYYA 432
F I A ++G+K L GL++ + W S+ A
Sbjct: 278 G--TTFVKNRIGCPKKAAEQIGFKAEVGLTEGLQRLIEWRRSHIA 320
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 268 (99.4 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 95/344 (27%), Positives = 157/344 (45%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYY--DPSLKKARQALLERSG--IFIVE 157
VLVTG AG++G+H L G + +DNF++ + S+ ++ + + E +G + E
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEE 63
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
DI D A L+ LF SF V+H A V ++Q P Y N+ G + LLE+ + A+
Sbjct: 64 MDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-AHG 122
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHI-YGLSLTGL 276
+V++SS++VYG +P E T + Y +K EE+ + L
Sbjct: 123 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVLL 182
Query: 277 RFFTVYG----------PWGRPDMAYFFFTRDILNRK-SIPIFE---SPDHGTVARDFTY 322
R+F G P G P+ + ++ + R+ ++ +F + + GT RD+ +
Sbjct: 183 RYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIH 242
Query: 323 IDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAK 382
+ D+ KG +AAL + R +NLG + V +V +E+ K
Sbjct: 243 VVDLAKGHIAALKKLKEQ----------CGCRTYNLGTGTGYSVLQMVQAMEKASGKKIP 292
Query: 383 RNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV +AN SLA ELG+ L + RW
Sbjct: 293 YKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 267 (99.0 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 79/228 (34%), Positives = 111/228 (48%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
LVTGAAGF+G+ + L G V+GLDNF +L+ L + S VE DI
Sbjct: 4 LVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEH----LADNSAHVFVEADIVT 59
Query: 163 MALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIV 222
A L + + V HLAAQ VR ++ +P N+ G V L E + + +
Sbjct: 60 -ADLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVH 118
Query: 223 WASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVY 282
+S S+YG + P E TD PAS YAA K AGE +T+ H+YGL + + VY
Sbjct: 119 TSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVY 177
Query: 283 GPWGRPDM---AYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIV 327
GP P F + +L+ K +F GT RD+ ++DD+V
Sbjct: 178 GPRQDPHGEAGVVAIFAQALLSGKPTRVFGD---GTNTRDYVFVDDVV 222
Score = 217 (81.4 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 82/283 (28%), Positives = 123/283 (43%)
Query: 147 LLERSGIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLV 206
L + S VE DI A L + + V HLAAQ VR ++ +P N+ G V
Sbjct: 44 LADNSAHVFVEADIVT-ADLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTV 102
Query: 207 SLLEVCKNANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYN 266
L E + + + +S S+YG + P E TD PAS YAA K AGE +T+
Sbjct: 103 RLAEAARQTGVRKIVHTSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFR 161
Query: 267 HIYGLSLTGLRFFTVYGPWGRP--DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYID 324
H+YGL + + VYGP P + L P D GT RD+ ++D
Sbjct: 162 HLYGLDCSHIAPANVYGPRQDPHGEAGVVAIFAQAL-LSGKPTRVFGD-GTNTRDYVFVD 219
Query: 325 DIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRN 384
D+V + +A+ LR FN+G L S + +
Sbjct: 220 DVVDAFVRV--SADVGGG----------LR-FNIGTGKETSDRQLHSAVAAAVGGPDDPE 266
Query: 385 IMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWY 427
PR GD+ + +I LA+R LG++P +L G+++ V ++
Sbjct: 267 FHP-PRLGDLKRSCLDIGLAERVLGWRPQIELADGVRRTVEYF 308
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 266 (98.7 bits), Expect = 6.2e-23, P = 6.2e-23
Identities = 99/348 (28%), Positives = 163/348 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYY----D-PSLKKARQALLERSGIFIV 156
+LVTG G++G+H L G + +DNF++ D P + + ++ I
Sbjct: 5 ILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDTQ-IEFH 63
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
E D+ D L+K+F + SF VMH A V +++ P Y N+ G ++LLEV ++
Sbjct: 64 ELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSHG 123
Query: 217 PQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAH---TYNHIYGLSL 273
+ +V++SS++VYG K+P E+ + Y TK EE+ T + L
Sbjct: 124 VRN-LVFSSSATVYGDPQKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQCTAEKDWNAVL 182
Query: 274 TGLRFFTVYG----------PWGRPDMAYFFFTRDILNR-KSIPIF----ESPDHGTVAR 318
LR+F G P G P+ + + + R K + +F +PD GT R
Sbjct: 183 --LRYFNPIGAHISGQIGEDPQGIPNNLLPYVAQVAIGRRKHLNVFGNDYSTPD-GTGVR 239
Query: 319 DFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLK 378
D+ ++ D+ KG +AA+ + +V+NLG + V +VS +E+
Sbjct: 240 DYIHVVDLAKGHIAAVRKLKDS----------CGCKVYNLGTGTGYSVLQMVSAMEKASG 289
Query: 379 VKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
K I R+GDV +A+ SLA++ELG+K DL+ + RW
Sbjct: 290 RKIAYQIAPR-RSGDVASCYADASLAEKELGWKAEFDLERMCEDLWRW 336
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 258 (95.9 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 94/349 (26%), Positives = 159/349 (45%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSG-IFIVEGD 159
SVLVTG AG++G+H L G + +DN+++ SL++ ++ E + + D
Sbjct: 4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVD 63
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEV-----CKN 214
+ D L+K+F F V+H A V +++ P Y ++NI G V+LLEV CKN
Sbjct: 64 LRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKN 123
Query: 215 ANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIA---HTYNHIYGL 271
+V++SS++VYG +VP +E+ + Y TK EEI H + + +
Sbjct: 124 ------LVFSSSATVYGWPKEVPCTEESPISA-TNPYGRTKLFIEEICRDVHRSDSEWKI 176
Query: 272 SLTGLRFFTVYG----------PWGRPDMAYFFFTRDILNRKS-IPIFESP---DHGTVA 317
L LR+F G P G P+ + + + R+ + +F + GT
Sbjct: 177 IL--LRYFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGV 234
Query: 318 RDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLL 377
RD+ ++ D+ G +AAL + V+NLG + V ++V+ E+
Sbjct: 235 RDYIHVMDLADGHIAALRKLDDLKIS---------CEVYNLGTGNGTSVLEMVAAFEKAS 285
Query: 378 KVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
K +M R GD +A+ A+REL +K ++ + W
Sbjct: 286 GKKIPL-VMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNW 333
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 249 (92.7 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 91/343 (26%), Positives = 154/343 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSG---IFIVEG 158
VLVTG +G++G+H L + G V+ LDN + K++ ++ER G VEG
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNS-----KRSVLPVIERLGGKHPTFVEG 57
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI + AL+ ++ + V+H A V ++Q P Y +N+ G + L+ + AN +
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIY-GLSLTGLR 277
+++SS++VYG K+P+ E T P S Y +K E+I S+ LR
Sbjct: 118 N-FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176
Query: 278 FFTVYG----------PWGRPDMAYFFFTRDILNRK-SIPIF--ESP-DHGTVARDFTYI 323
+F G P G P+ + + + R+ S+ IF + P + GT RD+ ++
Sbjct: 177 YFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236
Query: 324 DDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKR 383
D+ G + A++ + ++NLG V D+V+ +
Sbjct: 237 MDLADGHVVAMEKL----------ANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNY 286
Query: 384 NIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
+ R GD+P A+ S A REL ++ T L + W
Sbjct: 287 HFAPR-REGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 248 (92.4 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 94/334 (28%), Positives = 152/334 (45%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+ VLVTG G++G+H + + G + LDN + L + + + R V+GD
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQF--VQGD 58
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I D ALL L + V+H A V ++Q P Y +N+ G + L+ + A +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK- 117
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIY-GLSLTGLRF 278
++V++SS++VYG T VP +E T + A+ Y +K EE + S+T LR+
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRY 176
Query: 279 FTVYG----------PWGRPDMAYFFFTRDILNRKS-IPIFES--PDH-GTVARDFTYID 324
F G P G P+ F T+ + R+ + +F S P GT RD+ ++
Sbjct: 177 FNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVM 236
Query: 325 DIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRN 384
D+ G +AAL A L ++NLG V D+V E
Sbjct: 237 DLADGHIAALKKV----------GTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYK 286
Query: 385 IMKLPRNGDVPFTHANISLAQRELGYKPTTDLQT 418
++ R GD+ A+ + A ++LG+K T +L T
Sbjct: 287 LVDR-RPGDIAEYWADPTKAAQDLGWKATRNLHT 319
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 248 (92.4 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 94/334 (28%), Positives = 152/334 (45%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+ VLVTG G++G+H + + G + LDN + L + + + R V+GD
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQF--VQGD 58
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I D ALL L + V+H A V ++Q P Y +N+ G + L+ + A +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK- 117
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIY-GLSLTGLRF 278
++V++SS++VYG T VP +E T + A+ Y +K EE + S+T LR+
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRY 176
Query: 279 FTVYG----------PWGRPDMAYFFFTRDILNRKS-IPIFES--PDH-GTVARDFTYID 324
F G P G P+ F T+ + R+ + +F S P GT RD+ ++
Sbjct: 177 FNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVM 236
Query: 325 DIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRN 384
D+ G +AAL A L ++NLG V D+V E
Sbjct: 237 DLADGHIAALKKV----------GTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYK 286
Query: 385 IMKLPRNGDVPFTHANISLAQRELGYKPTTDLQT 418
++ R GD+ A+ + A ++LG+K T +L T
Sbjct: 287 LVDR-RPGDIAEYWADPTKAAQDLGWKATRNLHT 319
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 253 (94.1 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 94/345 (27%), Positives = 159/345 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYY--DPSLKKARQALLERSG--IFIVE 157
VLVTG AG++G+H L G + +DNF++ + S+ ++ + + E +G + E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
DI D A L+ LF +F V+H A V ++Q P Y N+ G + LLE+ + A
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-AMG 123
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL-YAATKKAGEEIAHTYNHI-YGLSLTG 275
++V++SS++VYG VP S + + + Y +K EE+ +
Sbjct: 124 VKSLVFSSSATVYG--KPVPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTAWNAVL 181
Query: 276 LRFFTVYG----------PWGRPDMAYFFFTRDILNRK-SIPIFE---SPDHGTVARDFT 321
LR+F G P G P+ + ++ + R+ ++ +F + + GT RD+
Sbjct: 182 LRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYI 241
Query: 322 YIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKA 381
++ D+ KG +AAL + R++NLG + V +V +E+ K
Sbjct: 242 HVVDLAKGHIAALKKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 291
Query: 382 KRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV +AN SLA ELG+ L + RW
Sbjct: 292 PYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 249 (92.7 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 88/342 (25%), Positives = 159/342 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+LVTG AGF+G+ + L + + V+ L NF+ S ++ + + V+ DI
Sbjct: 3 ILVTGGAGFIGSALVRMLIEQTESVV-L-NFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKN-----AN 216
D A L+++ +MHLAA++ V ++ P ++ +NI G +LLE C++
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120
Query: 217 PQPA---IVWASSSSVYGLNTKVP-FSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLS 272
Q + S+ V+G T+ FSE D P+S Y+A+K + + + ++ Y L
Sbjct: 121 AQQRRFRLHHISTDEVFGSLTETGLFSETSAYD-PSSPYSASKASADHLVRAWHRTYALP 179
Query: 273 LTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLA 332
+ YGP+ P+ + L K +PI+ +G RD+ Y+DD VK L
Sbjct: 180 IVITNCSNNYGPFQYPEKLIPLMVSNALQSKPLPIY---GNGQQVRDWLYVDDHVKA-LY 235
Query: 333 ALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKV--KAKRNIMK--L 388
+ T Q + + + + + +LV + L + ++++ +
Sbjct: 236 LVATQGQLGQTYNIGGSCEQTNLTVVRHICSL-LEELVPTHPQSLAMGNAGFADLIQYVV 294
Query: 389 PRNG-DVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLS 429
R G DV + + S QRELG++P ++GL+K V W ++
Sbjct: 295 DRPGHDVRYA-IDASKIQRELGWRPQESFESGLRKTVEWIIN 335
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 246 (91.7 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 88/340 (25%), Positives = 152/340 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
VLVTG +G++G+H L + G V+ LDN + S+ + L + F VEGDI
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNS-KRSVLPVIERLSGKQPTF-VEGDIR 60
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
+ AL+ ++ + V+H A V ++ P Y +N+ G + L+ + AN +
Sbjct: 61 NEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKN-F 119
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYG-LSLTGLRFFT 280
+++SS++VYG K+P+ E T P S Y +K E+I S+ LR+F
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFN 179
Query: 281 VYG----------PWGRPDMAYFFFTRDILNRK-SIPIFES---PDHGTVARDFTYIDDI 326
G P G P+ + + + R+ S+ IF + P+ T RD+ ++ D+
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIHVMDL 239
Query: 327 VKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIM 386
G +AA+ + ++NLG V D+V+ + K +
Sbjct: 240 ADGHVAAMQQL----------ADKPGVHIYNLGAGIGSSVLDVVNAFSKACGKPVKYHFA 289
Query: 387 KLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
R+GD+P A+ + A +EL ++ T L + W
Sbjct: 290 PR-RDGDLPAYWADATKADKELNWRVTRTLDEMAQDTWHW 328
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 247 (92.0 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 91/331 (27%), Positives = 155/331 (46%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQAL---LERSGIFIVE 157
++LVTG AGF+GTH L + G V +DNF++ ++ + R+ + L + F +
Sbjct: 8 NILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL- 66
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
GD+ + ++KLF F V+H A V +++NP Y +N+ G ++L E N
Sbjct: 67 GDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNC 126
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYG-LSLTGL 276
+ +V++SS++VYG K+P E D + + Y TK EEIA + L
Sbjct: 127 K-MMVFSSSATVYGQPEKIPCME-DFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILL 184
Query: 277 RFFTVYG----------PWGRPDMAYFFFTRDILNR-KSIPIF--ESP-DHGTVARDFTY 322
R+F G P G P+ + + + R + ++ + P + G+ RD+ +
Sbjct: 185 RYFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIH 244
Query: 323 IDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAK 382
+ D+ G +AAL +NLG V ++V+ E K K
Sbjct: 245 VMDLADGHIAAL--------RKLFADPKIGCTAYNLGTGQGTSVLEMVAAFE---KASGK 293
Query: 383 RNIMKL-PR-NGDVPFTHANISLAQRELGYK 411
+ +KL PR +GD +A+ A++ELG+K
Sbjct: 294 KIPIKLCPRRSGDATAVYASTEKAEKELGWK 324
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 236 (88.1 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 70/238 (29%), Positives = 120/238 (50%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDY-YDPSLKKARQALLERSGIFIVEGD 159
++LVTGA GF+G+H+ +L ++G V L +N + + L+K+ L+ + +V GD
Sbjct: 3 NILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLEKS--PFLK--DMEVVSGD 58
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
+ D +K+ + + HL A + Y+ P SYV +N+ G +++LE K N
Sbjct: 59 LRDSFFCEKI--TKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKK-NEIS 115
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 279
+ S+S VYG VP EK QP S Y+A+K A + +A +Y + + L++ R F
Sbjct: 116 HFIHTSTSEVYGTAFYVPIDEKHPL-QPQSPYSASKIAADMMALSYYNSFNLNVNIARPF 174
Query: 280 TVYGP-WGRPDMAYFFFTRDILNRKSIPIFE-SPDHGTVARDFTYIDDIVKGCLAALD 335
YGP + T+ + K I + + SP RD ++ D +G ++ L+
Sbjct: 175 NTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPK-----RDLNFVLDTCEGFISLLN 227
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 237 (88.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 88/352 (25%), Positives = 153/352 (43%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
S+L+ G AG++G+H L G V+ +DN ++ A+ E G GD+
Sbjct: 3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-------DAITE--GAKFYNGDL 53
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
D A L+ +F + VMH AA + V +M+ P Y ++N+ G + LLEV
Sbjct: 54 RDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDK- 112
Query: 221 IVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 280
+++S+++ YG V ++ P + Y TK A E++ H Y+ L R+F
Sbjct: 113 FIFSSTAATYG-EVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFN 171
Query: 281 VYG--PWG------RPDMAYFFFTRDIL--NRKSIPIF----ESPDHGTVARDFTYIDDI 326
V G P G RP+ + R+ I +F +PD GT RD+ +++D+
Sbjct: 172 VAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPD-GTCIRDYIHVEDL 230
Query: 327 VKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIM 386
V L + + +NLGN + V ++V + + + +
Sbjct: 231 VAAHFLGLKDLQNG----------GESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVA 280
Query: 387 KLPRN-GDVPFTHANISLAQRELGYKPT-TDLQTGLKKFVRWYLSYYAGGKK 436
PR GD A+ A+ +LG+ P +++T ++ W+ G +K
Sbjct: 281 --PRRAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGYEK 330
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 227 (85.0 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 64/232 (27%), Positives = 115/232 (49%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRG-DGVLGL-DNFNDYYDPSLKKARQALLERSGIFIVE 157
+ +LVTG AGF+G SA +++ D L + D Y L++ + R I +
Sbjct: 1 MKILVTGGAGFIG---SAFVRKYAYDHELIIVDKLT--YAGDLRRIEEV---RDRIKFYK 52
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
D+ D ++++FD V+H AA++ V ++Q+P ++ +N+ G +L+ +
Sbjct: 53 ADVADKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGI 112
Query: 218 QPAIVWASSSSVYG-LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGL 276
+ V S+ VYG L + F+E+ +P S Y+ +K A + +A Y+ YGL +
Sbjct: 113 EK-FVHISTDEVYGELGKEGQFTEESPL-RPNSPYSVSKAAADMLARAYHRTYGLPVIVA 170
Query: 277 RFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVK 328
R YGPW P+ + LN + IP++ G R++ Y+DD ++
Sbjct: 171 RPCNNYGPWQYPEKLIPVVIKKALNNEPIPVY---GQGLNVREWLYVDDCIE 219
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 239 (89.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 95/333 (28%), Positives = 153/333 (45%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQAL---LERSGIFIVE 157
++LVTG AGF+GTH L +G V +DN ++ ++ + R+ + L F +
Sbjct: 8 NILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNL- 66
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
GD+ + ++KLF F V+H A V ++ NP Y +N+ G ++L E N
Sbjct: 67 GDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNC 126
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIA---HTYNHIYGLSLT 274
+ +V++SS++VYG VP E D Q + Y TK EEIA H + + L
Sbjct: 127 K-MMVFSSSATVYGQPEIVPCVE-DFELQAMNPYGRTKLFLEEIARDIHAAEPEWKIIL- 183
Query: 275 GLRFFTVYG----------PWGRPDMAYFFFTRDILNR-KSIPIF--ESPD-HGTVARDF 320
LR+F G P G P+ + + + R + +F + P G+ RD+
Sbjct: 184 -LRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDY 242
Query: 321 TYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVK 380
++ D+ G +AAL+ +NLG V ++VS E K
Sbjct: 243 IHVMDLADGHVAALNKL--------FSDSKIGCTAYNLGTGQGTSVLEMVSSFE---KAS 291
Query: 381 AKRNIMKL-PRN-GDVPFTHANISLAQRELGYK 411
K+ +KL PR GD +A+ A++ELG+K
Sbjct: 292 GKKIPIKLCPRRAGDATAVYASTQKAEKELGWK 324
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 239 (89.2 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 83/339 (24%), Positives = 140/339 (41%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+LVTG AGF+ +HV +L R ++ LD + Y SLK + + E+ ++GD
Sbjct: 25 LLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLD--YCASLKNL-ETVSEKENYKFIQGD 81
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I + +K+LF+ V+H AAQ V + + + + N+ G L+ AN +
Sbjct: 82 ICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVEK 141
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 279
V+ S+ VYG +T F E P + YA++K A E +Y Y + R
Sbjct: 142 -FVYVSTDEVYGGSTDQEFDESS-PKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSS 199
Query: 280 TVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEX 339
VYGP P+ F + + I S G R+F Y D+V+ L L E
Sbjct: 200 NVYGPHQYPEKVIPKFISLLQQNRKCCIHGS---GLQRRNFLYATDVVEAFLTVLK--EG 254
Query: 340 XXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDV-PFTH 398
++ + L +L+ ++++ + M ++ +
Sbjct: 255 KPGEIYNIGTNFEMSIVQLAK-------ELIHLIKKTSSESEMEHWMDYVKDRPTNDLRY 307
Query: 399 ANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYAGGKKA 437
S LG++P + G+KK + WY + K A
Sbjct: 308 PMSSEKMHNLGWRPKVPWKEGIKKTIEWYKENFHNWKNA 346
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 237 (88.5 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 90/347 (25%), Positives = 156/347 (44%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSG-IFIVEGD 159
+VLV+G AG++G+H L G V+ +DN ++ SL++ ++ E + + D
Sbjct: 5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEV-----CKN 214
+ D + L+K+F F V+H A V +++ P Y ++N+ G ++LLEV CKN
Sbjct: 65 LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124
Query: 215 ANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAH-TYNHIYGLSL 273
+V++SS++VYG +VP +E+ + Y TK EEI Y +
Sbjct: 125 ------LVFSSSATVYGSPKEVPCTEEFPISA-LNPYGRTKLFIEEICRDVYGSDPEWKI 177
Query: 274 TGLRFFTVYG----------PWGRPDMAYFFFTRDILNRKS-IPIFESPDH---GTVARD 319
LR+F G P G P+ F + + R+ + +F + + GT RD
Sbjct: 178 ILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRD 237
Query: 320 FTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKV 379
+ ++ D+ G +AAL E V+NLG + V ++V E+
Sbjct: 238 YIHVIDLADGHIAALRKLEDCKIG---------CEVYNLGTGNGTSVLEMVDAFEKASGK 288
Query: 380 KAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
K ++ R GD +A+ A+ EL +K ++ + W
Sbjct: 289 KIPL-VIAGRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNW 334
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 234 (87.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 87/342 (25%), Positives = 152/342 (44%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+++LVTG AG++GTH L G V+ LDN ++ +L + + + + +GD
Sbjct: 1 MTILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVER--ITGKSVTFYQGD 58
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I + ALL+K+F S V+H A V ++ P Y +N+ G + L +V +
Sbjct: 59 ILNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKN 118
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIY-GLSLTGLRF 278
+V++SS++VYG +P +E D + Y +K E I +H ++ LR+
Sbjct: 119 -LVFSSSATVYGDPASLPITE-DFPTGATNPYGQSKLMVEHILADLHHSDPSWNIARLRY 176
Query: 279 FTVYG----------PWGRPDMAYFFFTRDILN-RKSIPIF--ESPDH-GTVARDFTYID 324
F G P P+ F + + R+++ +F + P H GT RD+ ++
Sbjct: 177 FNPVGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVV 236
Query: 325 DIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRN 384
D+ G L AL+ L +NLG V D+V E+ K+
Sbjct: 237 DLAIGHLKALEKL----------ATKPGLVTYNLGTGQGYSVLDMVKAFEKACG-KSIAY 285
Query: 385 IMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GD+ +A+ A+ +L ++ T L+ W
Sbjct: 286 LIAPRRPGDIAACYADPDHAKTDLDWQATHSLEDMANSSWHW 327
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 235 (87.8 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 86/345 (24%), Positives = 141/345 (40%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
VLVTG AGF+ +H+ +L ++ LD + Y SLK + + + ++GD
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNYKFIQGD 76
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I D +K LF+ V+H AAQ V + + + N+ G L+ A +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEK 136
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 279
++ S+ VYG + F E QP + YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 280 TVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGT--VARDFTYIDDIVKGCLAALDTA 337
VYGP P+ F + + + I HGT R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCI-----HGTGLQTRNFLYATDVVEAFLTVLKKG 249
Query: 338 EXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMK--LPRNGDVP 395
+ ++N+G + V L L +L+K + M+ + D P
Sbjct: 250 KPG-------------EIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRP 296
Query: 396 FTHANISLAQRE---LGYKPTTDLQTGLKKFVRWYLSYYAGGKKA 437
+ + LG++P + G+KK + WY + K A
Sbjct: 297 TNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKNA 341
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 234 (87.4 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 83/333 (24%), Positives = 137/333 (41%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
VLVTG AGF+ +H+ +L ++ LD + Y SLK + + + ++GD
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNYKFIQGD 76
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I D +K LF+ V+H AAQ V + + + N+ G L+ A +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEK 136
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 279
++ S+ VYG + F E QP + YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 280 TVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEX 339
VYGP P+ F + + + I S G R+F Y D+V+ L L +
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGS---GLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 340 XXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMK--LPRNGDVPFT 397
++N+G + V L L +L+K + M+ + D P
Sbjct: 252 G-------------EIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTN 298
Query: 398 HANISLAQRE---LGYKPTTDLQTGLKKFVRWY 427
+ + LG++P + G+KK + WY
Sbjct: 299 DMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWY 331
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 232 (86.7 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 84/343 (24%), Positives = 140/343 (40%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+LVTG AGF+ +HV +L ++ LD + Y SLK + + + ++GD
Sbjct: 20 LLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNYKFIQGD 76
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I + +K LF+ V+H AAQ V + + + N+ G L+ A +
Sbjct: 77 ICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEK 136
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 279
++ S+ VYG + F E QP + YA++K A E +Y Y R
Sbjct: 137 -FIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSS 194
Query: 280 TVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEX 339
VYGP P+ F + + + I S G R+F Y D+V+ L L +
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGS---GLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 340 XXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMK--LPRNGDVPFT 397
++N+G + V L L +L+K + + M+ + D P
Sbjct: 252 G-------------EIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTN 298
Query: 398 HANISLAQRE---LGYKPTTDLQTGLKKFVRWYLSYYAGGKKA 437
+ + LG++P + G+KK + WY + K A
Sbjct: 299 DMRYPMKSEKIQGLGWRPKVPWKEGIKKTIDWYRENFHNWKNA 341
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 232 (86.7 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 90/340 (26%), Positives = 141/340 (41%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
VLVTG AGF+ +HV +L ++ LD + Y SLK +++ FI +GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKNLEPVSNKQNYKFI-QGD 76
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I D +K+LF+ V+H AAQ V + + + N+ G L+ A +
Sbjct: 77 ICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVEK 136
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 279
++ S+ VYG + F E QP + YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 280 TVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEX 339
VYGP P+ F + + + I S G R+F Y D+V+ L L E
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHDRKCCIHGS---GLQRRNFLYAADVVEAFLTVLTKGEP 251
Query: 340 XXXXXXXXXXXAQLRVFNLGNT--SPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFT 397
++ V L + ++ S ER + + R P N D+ +
Sbjct: 252 GEIYNIGTNF--EMSVVQLAKELIQLIKETNSDSETERWVDYVSDR-----PHN-DMRYP 303
Query: 398 HANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYAGGKKA 437
+ + LG+KP + G+KK V WY + K A
Sbjct: 304 MKSEKI--HSLGWKPKVPWEEGIKKTVEWYRENFHNWKNA 341
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 240 (89.5 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 88/333 (26%), Positives = 138/333 (41%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
++L+TGAAGF+ +HV+ L R ++ LD + Y +LK + + F V+G
Sbjct: 8 NILITGAAGFIASHVANRLVRSYPDYKIVVLDKLD--YCSNLKNLNPSKSSPNFKF-VKG 64
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI L+ L +MH AAQ V + N + +NI G LLE CK
Sbjct: 65 DIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGL 276
+ S+ VYG + Q P + Y+ATK E + Y YGL +
Sbjct: 125 RRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 277 RFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDT 336
R VYGP P+ F +N K +PI G+ R + Y +D+ + L
Sbjct: 185 RGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGD---GSNVRSYLYCEDVAEAFEVVLHK 241
Query: 337 AEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRN--GDV 394
E V+N+G T V D+ + + +L + I + D
Sbjct: 242 GEVN-------------HVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQ 288
Query: 395 PFTHANISLAQRELGYKPTTDLQTGLKKFVRWY 427
+ + L ++LG+ T+ + GL+K + WY
Sbjct: 289 RYFLDDQKL--KKLGWCERTNWEEGLRKTMEWY 319
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 231 (86.4 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 90/338 (26%), Positives = 138/338 (40%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
VLVTG AGF+ +HV +L ++ LD + Y SLK +++ FI +GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLD--YCASLKNLEPVSNKQNYKFI-QGD 76
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I D +K LF+V V+H AAQ V + + + N+ G L+ A +
Sbjct: 77 ICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEK 136
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 279
++ S+ VYG + F E QP + YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 280 TVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEX 339
VYGP P+ F + + + I S G R+F Y D+V+ L L E
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGS---GLQRRNFLYAADVVEAFLTVLTKGEP 251
Query: 340 XXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA 399
++ V L + + S E V + P N D+ +
Sbjct: 252 GEIYNIGTNF--EMSVVQLAKELIQLIKETNSESETESWVDY---VSDRPHN-DMRYPMK 305
Query: 400 NISLAQRELGYKPTTDLQTGLKKFVRWYLSYYAGGKKA 437
+ + LG+KP + G+KK V WY + K A
Sbjct: 306 SEKI--HSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNA 341
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 230 (86.0 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 84/342 (24%), Positives = 139/342 (40%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
VLVTG AGF+ +HV +L ++ LD + Y SLK + + ++ ++GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLD--YCASLKNL-ETISDKQNYKFIQGD 76
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I D +K LF+ V+H AAQ V + + + N+ G LL A +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAHEARVEK 136
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFF 279
++ S+ VYG + F E QP + YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 280 TVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEX 339
VYGP P+ F + + + I S G R+F Y D+V+ L L +
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGS---GLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 340 XXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRN----IMKLPRNGDVP 395
++ V L +L+ +++ N + P N D+
Sbjct: 252 GEIYNIGTNF--EMSVLQLAK-------ELIQLIKETKSESEMENWVDYVNDRPTN-DMR 301
Query: 396 FTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYAGGKKA 437
+ + + LG++P + G+KK + WY + K A
Sbjct: 302 YPMKSEKI--HGLGWRPKVPWKEGIKKTIEWYRENFHNWKNA 341
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 225 (84.3 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 90/341 (26%), Positives = 156/341 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
L+TG AGF+G+H++ L RG V +DNF Y K + + E I I D N
Sbjct: 6 LITGGAGFIGSHLAEELVGRGYNVTIVDNF---YKGKNKYHDELMKEIRVIPISVLDKNS 62
Query: 163 MALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIV 222
+ L DVV HLAA GV+ M+ + +N G ++L+ + +V
Sbjct: 63 IYELVNQHDVV-----FHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKK--VV 115
Query: 223 WASSSSVYGLNTKVPFSEK-DR----TDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+AS+S VYG K PFSE+ DR T + YA K E + Y + GL +T +R
Sbjct: 116 FASTSEVYG-KAKPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LEGLPVTIVR 173
Query: 278 FFTVYGPWGRPDMAYFF----FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAA 333
+F +YGP + D Y F L + I ++ G R FTY+ D V+ + A
Sbjct: 174 YFNIYGPRAK-DGPYAGVIPRFISAALQGEDILVYGD---GEQTRCFTYVSDAVEATIRA 229
Query: 334 LDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLP---- 389
+D + N+G+ + + ++ ++++L +K I+++P
Sbjct: 230 MDEKVNG-------------EIINIGSENEKSIKEVAEVIKKLTDSSSK--IVQVPFEEV 274
Query: 390 -RNG--DVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWY 427
+G ++P +++ + + ++ + GLK+ ++W+
Sbjct: 275 YPHGFEEIPNRRPDVTKLKDLVQFQAKVTWEDGLKETIKWF 315
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 228 (85.3 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 92/344 (26%), Positives = 147/344 (42%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLK--KARQALLERSG--IFIV 156
+VLVTG AG++G+H + G V+ +DN + Y K +A + E +G +
Sbjct: 5 TVLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
DI D ++ +F V H AA V + + P Y H+N+ G LLE + N
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 217 PQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTY-NHIYGLSLTG 275
V++SS++VYG +P +E+ T S Y TK EEI ++
Sbjct: 125 VFK-FVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVS 183
Query: 276 LRFFTVYG----------PWGRPDMAYFFFTRDILNRK-SIPIFESPDHGTVARDFTYID 324
LR+F G P G P+ + + + R+ S+ ++ S D T D T +
Sbjct: 184 LRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGS-DFPT--HDGTGVR 240
Query: 325 DIVKGCLAALDTAEXXXXXXXXXXXXAQLRVF--NLGNTSPVPVSDLVSILERLLKVKAK 382
D + +D AE A+ F NLG V D+V E+ K
Sbjct: 241 DYIH----IVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVN 296
Query: 383 RNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R+GDV +A+ +LA ++LG+K + + RW
Sbjct: 297 YTLVDR-RSGDVATCYADATLADKKLGWKAERGIDKMCEDTWRW 339
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 223 (83.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 94/341 (27%), Positives = 150/341 (43%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
VLVTG AG++G+HV L G V+ DN + + +L ER +V GD++
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALVHG-----ER----LVTGDLS 53
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
D A L LF F+ V+H AA ++ P Y +N ++LL C +
Sbjct: 54 DTARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVE-RF 112
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 281
+++S+++VYG+ +E+ T P + Y +K E + +G+ LR+F V
Sbjct: 113 IFSSTAAVYGIPDSGVAAEESAT-VPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYFNV 171
Query: 282 YG--PWGR-----PDMAYFFFT--RDILN-RKSIPIF----ESPDHGTVARDFTYIDDIV 327
G P R P+ + + L R + IF +PD GT RD+ +++D+
Sbjct: 172 AGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPD-GTGIRDYIHVEDLA 230
Query: 328 KGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMK 387
LAAL E R+ N+G S V +++ ++ R+ V +
Sbjct: 231 SAHLAALSYLEKGGEST---------RI-NVGYGSGSSVREVIDMVRRVSGVHFLAE--E 278
Query: 388 LPRN-GDVPFTHANISLAQRELGYKPTTD-LQTGLKKFVRW 426
PR GD P A A+ LG+ P D L+T + RW
Sbjct: 279 APRRPGDPPSLVARADRARTLLGWTPRYDNLETIVADAWRW 319
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 225 (84.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 83/334 (24%), Positives = 141/334 (42%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
+VLVTG AGF+G+H+ AL R ++ +DN Y +LK R S FI G
Sbjct: 8 TVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQ--YCSNLKNLRSVQASSSYSFI-PG 64
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D +K LF V H AA+ V + P+ ++ N+ G L+ A+ Q
Sbjct: 65 DVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQ 124
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTY--NHIYGLSLTGL 276
++ S+ VYG + PF E +P + Y+ +K A E I +Y H + +T
Sbjct: 125 -RFIYISTDEVYGDSVDQPFDELS-PKRPTNPYSRSKAAAESIVTSYWLKHKFPAVIT-- 180
Query: 277 RFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDT 336
R VYGP + F + ++ I S G +R F Y+ D+ L ++
Sbjct: 181 RSSNVYGPRQHHEKVIPRFLSLLQQQQKCTIQGS---GLQSRHFLYVSDVTDAFLTVME- 236
Query: 337 AEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPF 396
+ ++ + L +LV + + + ++ + ++ D P
Sbjct: 237 -KGILGEIYNIGTGFEIPIIQLAR-------ELVQMTVKSVSAESLDDWLEFVE--DRPV 286
Query: 397 THANI---SLAQRELGYKPTTDLQTGLKKFVRWY 427
T S+ LG++P G+++ V+WY
Sbjct: 287 TELRYPMNSVKLHRLGWRPKVAWTEGIRRTVQWY 320
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 225 (84.3 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 83/343 (24%), Positives = 152/343 (44%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERS-GIFIVEGD 159
++LVTG AG++G+H L G + +DN ++ S+++ + + + + + D
Sbjct: 4 NILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVD 63
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
+ D L+K+F F VMH A V ++ P Y ++N+ ++LLEV A+
Sbjct: 64 LRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMA-AHGCK 122
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNH-IYGLSLTGLRF 278
+V++SS++VYG +VP +E+ S Y TK E+I + LR+
Sbjct: 123 KLVFSSSATVYGWPKEVPCTEESPLSG-MSPYGRTKLFIEDICRDVQRGDPEWRIIMLRY 181
Query: 279 FTVYG----------PWGRPDMAYFFFTRDILNR-KSIPIFESP---DHGTVARDFTYID 324
F G P G P+ + + ++ R ++ I+ + GT RD+ ++
Sbjct: 182 FNPVGAHPSGRIGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYIHVV 241
Query: 325 DIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRN 384
D+ G + AL + V+NLG V ++V E+ +K
Sbjct: 242 DLADGHICALQKLDDTEIG---------CEVYNLGTGKGTTVLEMVDAFEKASGMKIP-- 290
Query: 385 IMKLPRN-GDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++K+ R GD +A+ A+REL +K ++ + W
Sbjct: 291 LVKVGRRPGDAETVYASTEKAERELNWKANFGIEEMCRDQWNW 333
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 225 (84.3 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 91/346 (26%), Positives = 153/346 (44%)
Query: 102 VLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
+L+TG AGF+G+ V + D V+ +D Y + A A ER V DI
Sbjct: 4 ILITGGAGFIGSALVRYIINETSDAVVVVDKLT-YAGNLMSLAPVAQSERFAFEKV--DI 60
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCK---NA-- 215
D A L ++F VMHLAA++ V ++ P +++ +NI G +LLE + NA
Sbjct: 61 CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120
Query: 216 -NPQPAIVW--ASSSSVYG-LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL 271
+ + A + S+ VYG L++ F + P+S Y+A+K + + + + YGL
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 272 SLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCL 331
YGP+ P+ + L KS+P++ +G RD+ Y++D +
Sbjct: 181 PTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVY---GNGQQIRDWLYVEDHARALY 237
Query: 332 AALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAK-----RNIM 386
T + + NL V + +LE L K R+++
Sbjct: 238 CVATTGKVGETYNIGGHNERK----NLD-----VVETICELLEELAPNKPHGVAHYRDLI 288
Query: 387 KL--PRNG-DVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLS 429
R G D+ + + S RELG+ P ++G++K V+WYL+
Sbjct: 289 TFVADRPGHDLRYA-IDASKIARELGWLPQETFESGMRKTVQWYLA 333
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 232 (86.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 88/334 (26%), Positives = 138/334 (41%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIF-IVE 157
++L+TGAAGF+ +HV+ L R ++ LD + Y +LK + + S F V+
Sbjct: 8 NILITGAAGFIASHVANRLIRSYPDYKIVVLDKLD--YCSNLKNLNPS--KHSPNFKFVK 63
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
GDI L+ L +MH AAQ V + N + +NI G LLE CK
Sbjct: 64 GDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTG 275
+ S+ VYG + Q P + Y+ATK E + Y YGL +
Sbjct: 124 IRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
Query: 276 LRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
R VYGP P+ F + + +PI G+ R + Y +D+ + L
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGD---GSNVRSYLYCEDVAEAFEVVLH 240
Query: 336 TAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRN--GD 393
E V+N+G V+D+ + +L + + NI + D
Sbjct: 241 KGEVG-------------HVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFND 287
Query: 394 VPFTHANISLAQRELGYKPTTDLQTGLKKFVRWY 427
+ + L ++LG+ T + GLKK + WY
Sbjct: 288 QRYFLDDQKL--KKLGWSERTTWEEGLKKTMDWY 319
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 217 (81.4 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 70/240 (29%), Positives = 113/240 (47%)
Query: 102 VLVTGAAGFVGTHVSAAL--KRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+L+TG AGF+G+H++ L K + ++ LD + Y ++ L E + F +G+
Sbjct: 12 ILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLD--YCSNINNLGCVLKELNFKFY-KGN 68
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I D LL+ +F+ V+HLAA V + + + +NI G LLE CKN +
Sbjct: 69 ILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKK 128
Query: 220 AIVWASSSSVYGL---------NTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIY 269
++ S+ VYG N + S +++ P + Y+A+K E + +Y +
Sbjct: 129 -FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSF 187
Query: 270 GLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTV--ARDFTYIDDIV 327
L + R +YGP P+ F +LN K I HGT R++ YIDDIV
Sbjct: 188 KLPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTI-----HGTGKNTRNYLYIDDIV 242
Score = 48 (22.0 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 393 DVPFT-HA-NISLAQ-RELGYKPTTDLQTGLKKFVRWY 427
D PF H NI+ ++ LG+K + + G++K WY
Sbjct: 325 DRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWY 362
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 224 (83.9 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 91/350 (26%), Positives = 163/350 (46%)
Query: 99 GIS-VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVE 157
G++ VLVTG AG++G+H + L + V +DN + +++ ++ E + +
Sbjct: 69 GVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIY 128
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
D+ D + K+F +F VMH AA A V + Q P Y H+ + + +LE A+
Sbjct: 129 ADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMA-AHG 187
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQ-PASLYAATKKAGEEIAHTYNHIYGLSLTGL 276
++++S+ + YG +P +E+ T Q P + Y KK E+I ++ +++ L
Sbjct: 188 VKTLIYSSTCATYGEPDIMPITEE--TPQVPINPYGKAKKMAEDIILDFSKNSDMAVMIL 245
Query: 277 RFFTVYG--PWGR------PDM--------AYFFFTRDILNRKSIP--IFESPDHGTVAR 318
R+F V G P GR P++ A F R I+ I +++ D GT R
Sbjct: 246 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTAD-GTCVR 304
Query: 319 DFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLK 378
D+ + D+V + AL A+ ++ ++N+G V + V ++
Sbjct: 305 DYIDVTDLVDAHVKALQKAKPR-----------KVGIYNVGTGKGSSVKEFVEACKKATG 353
Query: 379 VKAKRNIMKLPRN-GDVPFTHANISLAQRELGYKPT-TDLQTGLKKFVRW 426
V+ K I LPR GD +++ S ++EL + T+L+ L+ RW
Sbjct: 354 VEIK--IDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRW 401
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 216 (81.1 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 80/331 (24%), Positives = 149/331 (45%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDY-YDPSLKKARQALLERSGIFIVEG 158
+++LVTG AGF+G++ + + + + NF+ Y +L + ++ + + V+G
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYE-TYKIINFDALTYSGNLNNVK-SIQDHPNYYFVKG 58
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
+I + LL+ + +++ AA++ V +++NP + +N+ G V+LLE+ K P
Sbjct: 59 EIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PH 117
Query: 219 PAIVWASSSSVYG-LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+V S+ VYG L F+E+ P S Y+++K + + IA Y Y L + R
Sbjct: 118 IKLVQVSTDEVYGSLGKTGRFTEETPL-APNSPYSSSKASADMIALAYYKTYQLPVIVTR 176
Query: 278 FFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTA 337
YGP+ P+ + L K +P++ G RD+ ++ D C +A+D
Sbjct: 177 CSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGD---GLNVRDWLHVTD---HC-SAIDVV 229
Query: 338 EXXXXXXXXXXXXAQLRVFNLG-NTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPF 396
V+N+G N V + I+ L K K + D +
Sbjct: 230 LHKGRVG---------EVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRY 280
Query: 397 THANISLAQRELGYKPTTDLQTGLKKFVRWY 427
N + E ++P + GL++ V+WY
Sbjct: 281 A-INAEKMKNEFDWEPKYTFEQGLQETVQWY 310
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 199 (75.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 69/228 (30%), Positives = 110/228 (48%)
Query: 102 VLVTGAAGFVGTH-VSAALKR-RGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+LVTG AGF+G + V AL+ R + LD Y S +++ + +R I +V+GD
Sbjct: 3 LLVTGGAGFIGANFVHLALREARTSSITVLDALT--YAGS-RESLAPVADR--IRLVQGD 57
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
I D AL+ L V V+H AA+ V A+ +P ++HSN+ G ++LE + N +
Sbjct: 58 ITDAALVGDL--VAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVR- 114
Query: 220 AIVWASSSSVYG-LNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ S+ VYG L P + T P+S Y++TK A + + + YG+ T
Sbjct: 115 -LHHVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISN 173
Query: 278 FFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDD 325
YGP+ + F R I N + + G RD+ ++DD
Sbjct: 174 CSNNYGPYQHVEK---FIPRQITNVLTGRRPKLYGAGANVRDWIHVDD 218
Score = 56 (24.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 402 SLAQRELGYKPT-TDLQTGLKKFVRWY 427
S Q ELG+ P TD + GL + WY
Sbjct: 282 STLQDELGWAPKHTDFEAGLTDTIDWY 308
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 221 (82.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 86/349 (24%), Positives = 160/349 (45%)
Query: 99 GIS-VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVE 157
G++ VLVTG AG++G+H + L R V +DN + ++K +Q + + +
Sbjct: 93 GVTHVLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIY 152
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
D+ D ++K+F +F VMH AA A V + P Y H+ + + +LE
Sbjct: 153 ADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKV 212
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ ++++S+ + YG K+P +E D P + Y KK E++ ++ +++ LR
Sbjct: 213 KK-LIYSSTCATYGEPEKMPITE-DTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILR 270
Query: 278 FFTVYG--PWGR------PDM--------AYFFFTRDILNRKSIP--IFESPDHGTVARD 319
+F V G P GR P++ A F R + + +++ D GT RD
Sbjct: 271 YFNVIGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSD-GTCIRD 329
Query: 320 FTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKV 379
+ + D+V + AL+ A+ ++ ++N+G V + V ++ V
Sbjct: 330 YIDVTDLVDAHVKALEKAQPR-----------KVGIYNVGTGKGRSVKEFVEACKKATGV 378
Query: 380 KAKRNIMKLPRN-GDVPFTHANISLAQRELGYKPT-TDLQTGLKKFVRW 426
+ K + LPR GD +++ + ++L + T+LQ L+ RW
Sbjct: 379 EIKVDF--LPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRW 425
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 217 (81.4 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 88/344 (25%), Positives = 155/344 (45%)
Query: 101 SVLVTGAAGFVGTH-VSAALKRR-GDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
+VLVTG AGF+G++ ++ L G V+ LD Y +L+ A+ + V+G
Sbjct: 9 AVLVTGGAGFIGSNFINHFLPANPGCRVINLDILT--YAGNLRNLT-AVEQNPAYRFVKG 65
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D L++++ V+H AA++ V ++ P +V +N+ G LLE +
Sbjct: 66 DIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWES 125
Query: 219 PAI-----VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSL 273
AI + S+ VYG + + ++ P S Y+A+K + + YN +GL +
Sbjct: 126 GAIERFRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPV 185
Query: 274 TGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAA 333
R YGP+ P+ +I+ K +P++ G RD+ ++ D A
Sbjct: 186 LTTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYGD---GRNVRDWLHVKDHS----TA 238
Query: 334 LDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSIL-----ERLLKVKAK-RNIMK 387
++T VFN+G + D+V +L ERL + + R ++
Sbjct: 239 IETVLKGGKPG---------EVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLIT 289
Query: 388 LPRNGDVPFTHANISLAQ--RELGYKPTTDLQTGLKKFVRWYLS 429
++ IS A+ RELG++P+ + G+ + V WYL+
Sbjct: 290 FVKDRLGHDRRYAISAAKIKRELGWEPSYTFERGIAETVDWYLA 333
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 215 (80.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 84/348 (24%), Positives = 151/348 (43%)
Query: 100 ISVLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
+++LVTG +GF+G+ + + D V+ +D Y + R+ +E + ++ E
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLT--YAANQSALRE--VENNPRYVFEK 57
Query: 159 -DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKN--- 214
DI D+ +++ +F+ VMHLAA++ V ++ +V +NI G +LLEV KN
Sbjct: 58 VDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWH 117
Query: 215 -ANPQPAIVWA----SSSSVYG-LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHI 268
+ + S+ VYG L+ P + P+S Y+A+K A + ++
Sbjct: 118 TLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRT 177
Query: 269 YGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVK 328
YGL + YG + + + + K +PI+ G RD+ +++D V+
Sbjct: 178 YGLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGD---GQQIRDWLFVEDHVQ 234
Query: 329 GCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLK-----VKAKR 383
L N T+ V + +LE L +K
Sbjct: 235 ASYLVLTKGRVGENYNIGG---------NCEKTNLEVVKRICQLLEELAPSKPNHIKYYE 285
Query: 384 NIMKL--PRNG-DVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYL 428
++M R G DV ++ + S ELG++P + GL++ V+WYL
Sbjct: 286 DLMTFVKDRPGHDVRYS-LDCSKIHAELGWQPQITFEQGLRQTVKWYL 332
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 215 (80.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 82/345 (23%), Positives = 156/345 (45%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+++L+TG AG++G+H L ++ +DN ++ SL + ++ + + F E
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKE-ITGKQFEFYKENV 59
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
+N + ++F + V+H A V + P +Y ++NI + L +V + N +
Sbjct: 60 LN-REKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKN 118
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYG-LSLTGLRF 278
+++SS++VYG+ +P +E+ + Y TK E+I S+ LR+
Sbjct: 119 -FIFSSSATVYGIPKTLPITEEFPLSV-TNPYGQTKLMIEQIMRDVAKADDEWSIALLRY 176
Query: 279 FTVYG----------PWGRPDMAYFFFTRDILNR-KSIPIF--ESPDH-GTVARDFTYID 324
F +G P G P+ + T+ + + K + IF + P GT RD+ ++
Sbjct: 177 FNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIHVV 236
Query: 325 DIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRN 384
D+ KG + AL+ + +NLG V ++V E++ K
Sbjct: 237 DLAKGHVKALEKV----------LKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKKIPYK 286
Query: 385 IMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLS 429
++ R GDV A++S A+RELG++ L+ RW ++
Sbjct: 287 VIGR-RPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVN 330
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 222 (83.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 87/333 (26%), Positives = 138/333 (41%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
++L+TGAAGF+ +HV+ L R ++ LD + Y LK + + F V+G
Sbjct: 10 NILITGAAGFIASHVANRLIRNYPDYKIVVLDKLD--YCSDLKNLDPSFSSPNFKF-VKG 66
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI L+ L + +MH AAQ V + N + +NI G LLE CK
Sbjct: 67 DIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 126
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGL 276
+ S+ VYG + Q P + Y+ATK E + Y YGL +
Sbjct: 127 RRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 186
Query: 277 RFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDT 336
R VYGP P+ F ++ K +PI G+ R + Y +D+ + L
Sbjct: 187 RGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGD---GSNVRSYLYCEDVAEAFEVVLHK 243
Query: 337 AEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRN--GDV 394
E V+N+G V D+ + +L + +I + D
Sbjct: 244 GEIG-------------HVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQ 290
Query: 395 PFTHANISLAQRELGYKPTTDLQTGLKKFVRWY 427
+ + L ++LG++ T+ + GLKK + WY
Sbjct: 291 RYFLDDQKL--KKLGWQERTNWEDGLKKTMDWY 321
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 222 (83.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 94/345 (27%), Positives = 148/345 (42%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNF-NDYYDPSLKKARQALLERSGIFIVEGDI 160
+LVTG AG++G+H L G V+ +DN N YD AR + + + + DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAV---ARIEFIVKQHVPFYDVDI 62
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
+ L K+F + V+H AA V + + P +Y +N++G V+LLEVCK AN
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKT 121
Query: 221 IVWASSSSVYGL------NTKVPFSEKDRTDQPASLYAATKKAGEEIAHT-YNHIYGLSL 273
IV++SS++VYG N+ +P E D P + Y TK E I YN +
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPEHCPMD-PTNPYGRTKFIIESILKDIYNSDDAWKV 180
Query: 274 TGLRFFTVYG----------PWGRPDMAYFFFTRDILNRKS-IPIFESPDHGTVARDFTY 322
LR+F G P G P+ + + + R+ + IF + D+ + RD T
Sbjct: 181 AILRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGN-DYNS--RDGTP 237
Query: 323 IDDIVKGCLAALDTAEXXXXXXXXXXXXAQL-RVFNLGNTSPVPVSDLVSILERLLKVKA 381
I D + + L L R +NLG V ++ +++ +
Sbjct: 238 IRDYIH--VVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGREL 295
Query: 382 KRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV A A +EL +K + K +W
Sbjct: 296 PHEVVGR-RAGDVLDLTAKPDRANKELQWKTELTIDDACKDLWKW 339
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 222 (83.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 94/345 (27%), Positives = 148/345 (42%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNF-NDYYDPSLKKARQALLERSGIFIVEGDI 160
+LVTG AG++G+H L G V+ +DN N YD AR + + + + DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAV---ARIEFIVKQHVPFYDVDI 62
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
+ L K+F + V+H AA V + + P +Y +N++G V+LLEVCK AN
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKT 121
Query: 221 IVWASSSSVYGL------NTKVPFSEKDRTDQPASLYAATKKAGEEIAHT-YNHIYGLSL 273
IV++SS++VYG N+ +P E D P + Y TK E I YN +
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPEHCPMD-PTNPYGRTKFIIESILKDIYNSDDAWKV 180
Query: 274 TGLRFFTVYG----------PWGRPDMAYFFFTRDILNRKS-IPIFESPDHGTVARDFTY 322
LR+F G P G P+ + + + R+ + IF + D+ + RD T
Sbjct: 181 AILRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIFGN-DYNS--RDGTP 237
Query: 323 IDDIVKGCLAALDTAEXXXXXXXXXXXXAQL-RVFNLGNTSPVPVSDLVSILERLLKVKA 381
I D + + L L R +NLG V ++ +++ +
Sbjct: 238 IRDYIH--VVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGREL 295
Query: 382 KRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV A A +EL +K + K +W
Sbjct: 296 PHEVVGR-RAGDVLDLTAKPDRANKELQWKTELTIDDACKDLWKW 339
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 213 (80.0 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 88/347 (25%), Positives = 147/347 (42%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFI-VEGDIN 161
LVTG AGF+G + RG V+ LD Y +L A LE + I V+GDI
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTL--ASLEGNADHIFVKGDIG 60
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKN---ANPQ 218
D AL+ +L V++ AA++ V +++ P +++ +N+ G ++LLE ++ A P
Sbjct: 61 DGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPD 120
Query: 219 PA-----IVWASSSSVYG-LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLS 272
+ S+ VYG L F+E P S Y+A+K A + + ++H YGL
Sbjct: 121 TRRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 273 LTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLA 332
+ YGP+ P+ L + +P++ G RD+ ++ D +
Sbjct: 180 VLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGD---GKQVRDWLFVSDHCEAIRT 236
Query: 333 ALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNG 392
L +N+G S ++V + LL R K PR
Sbjct: 237 VLAKGRVG-------------ETYNVGGNSERQNIEVVQAICALLDQHRPREDGK-PRES 282
Query: 393 DVPFT-----H-----ANISLAQRELGYKPTTDLQTGLKKFVRWYLS 429
+ + H + S + ELG++P + G+ + V WYL+
Sbjct: 283 QIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIAQTVDWYLT 329
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 211 (79.3 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 88/347 (25%), Positives = 146/347 (42%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFI-VEGDIN 161
LVTG AGF+G + RG V+ LD Y +L A LE + I V+GDI
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTL--ASLEGNADHIFVKGDIG 60
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKN---ANPQ 218
D AL+ +L V++ AA++ V +++ P +++ +N+ G ++LLE ++ A P
Sbjct: 61 DGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPD 120
Query: 219 PA-----IVWASSSSVYG-LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLS 272
+ S+ VYG L F+E P S Y+A+K A + + ++H YGL
Sbjct: 121 TRRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 273 LTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLA 332
+ YGP+ P+ L + +P++ G RD+ ++ D +
Sbjct: 180 VLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGD---GKQVRDWLFVSDHCEAIRT 236
Query: 333 ALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNG 392
L +N+G S ++V + LL R K PR
Sbjct: 237 VLAKGRVG-------------ETYNVGGNSERQNIEVVQAICALLDQHRPREDGK-PRES 282
Query: 393 DVPFT-----H-----ANISLAQRELGYKPTTDLQTGLKKFVRWYLS 429
+ + H + S + ELG++P + G+ V WYL+
Sbjct: 283 QIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIALTVDWYLT 329
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 202 (76.2 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 68/230 (29%), Positives = 110/230 (47%)
Query: 102 VLVTGAAGFVGTHV--SAALKRRGDGVLGLDNFNDYYDPSLKKARQALLE-RSGIFIVEG 158
+LVTG AGF+GT+ SA + D V LD Y R++L + I +V+G
Sbjct: 3 LLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALT-YAG-----RRESLADVEDAIRLVQG 56
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D L+ +L V V+H AA++ V A+ NP ++H+N+ G ++LE + +
Sbjct: 57 DITDAELVSQL--VAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVR 114
Query: 219 PAIVWASSSSVYG---LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTG 275
+ S+ VYG L+ + F+E + P+S Y+ATK + + + YG+ T
Sbjct: 115 --LHHISTDEVYGDLELDDRARFTESTPYN-PSSPYSATKAGADMLVRAWVRSYGVRATI 171
Query: 276 LRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDD 325
YGP+ + F R I N + + G RD+ ++DD
Sbjct: 172 SNCSNNYGPYQHVEK---FIPRQITNVLTGRRPKLYGAGANVRDWIHVDD 218
Score = 44 (20.5 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 407 ELGYKPT-TDLQTGLKKFVRWY 427
EL + P TD + GL+ + WY
Sbjct: 287 ELCWAPKHTDFEEGLRTTIDWY 308
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 208 (78.3 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 82/287 (28%), Positives = 137/287 (47%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFND---YYDPSLKKAR--QALLERSGIFIV 156
V +TG AGF+G+ ++ L+ + + +L +D + + +L+ + LLE G
Sbjct: 3 VAITGGAGFIGSQLALNLQEKHE-ILIIDKMRSSATFENGNLQSFGHFKNLLEFDGELFA 61
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
GDIND +LKK+ D + H AA + Q + +N+ +E+ + N
Sbjct: 62 -GDINDEKVLKKIEDFKPEI-IFHQAAISDTTVFDQT--KVLQTNLNTFKDFIELSIDLN 117
Query: 217 PQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLS-LTG 275
+ +++ASS+SVYG + K P + ++P + YA +K +++A Y Y + L G
Sbjct: 118 AK--LIYASSASVYG-DAKSP-QTVGKDEEPKNPYAFSKLMMDKLAKKY---YDKAHLVG 170
Query: 276 LRFFTVYGPW----GRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCL 331
LR+F VYG + F IL K+ +FE D + RDFTYI D++ L
Sbjct: 171 LRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQ--IYRDFTYIKDVINANL 228
Query: 332 AALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLK 378
ALD+ + V+N+G+ D+V IL++ LK
Sbjct: 229 IALDS---------------KCGVYNVGSGKARTFQDIVDILQKELK 260
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 209 (78.6 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 67/242 (27%), Positives = 115/242 (47%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPS-LKKARQALLERSGIFIVE 157
G +LVTGA GF+G+H++ AL RG +N + L LL+ +F
Sbjct: 5 GKKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFA-- 62
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
GDI D +++ V+HLAA + Y+ +P++YV +N+ G +++++ +
Sbjct: 63 GDIRDPHGVREAMKGCDV--VLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELGV 120
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+V S+S VYG VP +E+ Q S Y+A+K ++IA ++ + + +R
Sbjct: 121 AK-VVHTSTSEVYGTARFVPITEEHPL-QGQSPYSASKIGADQIAMSFYSSFDTPVAIIR 178
Query: 278 FFTVYGPWGRPDMAYFF---FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAAL 334
F YGP R F T+ +++ + H T RD Y+ D V G +A
Sbjct: 179 PFNTYGP--RQSARAFIPTVITQIASGARTLRL--GALHPT--RDLNYVADTVAGFIAVA 232
Query: 335 DT 336
++
Sbjct: 233 ES 234
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 193 (73.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 54/164 (32%), Positives = 86/164 (52%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYY--DPSLKKARQALLERSG--IFIVE 157
VLVTG AG++G+H L G + +DNF++ + SL ++ + + E +G + E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
DI D L++LF SF V+H A V ++Q P Y N+ G + LLE+ K A+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEI 261
+V++SS++VYG +P E T + Y +K EE+
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 193 (73.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 54/164 (32%), Positives = 86/164 (52%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYY--DPSLKKARQALLERSG--IFIVE 157
VLVTG AG++G+H L G + +DNF++ + SL ++ + + E +G + E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
DI D L++LF SF V+H A V ++Q P Y N+ G + LLE+ K A+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEI 261
+V++SS++VYG +P E T + Y +K EE+
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 85/355 (23%), Positives = 153/355 (43%)
Query: 100 ISVLVTGAAGFVGTHVSA-ALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
+ +L+TG AGF+G+ V +K D V+ +D Y +L+ + E +
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT--YAGNLESLSD-ISESNRYNFEHA 57
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCK---NA 215
DI D A + ++F+ VMHLAA++ V ++ P +++ +NI G +LLEV + +A
Sbjct: 58 DICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA 117
Query: 216 NPQPA-----IVWASSSSVYG-L--------NTKVPFSEKDRTDQPASLYAATKKAGEEI 261
+ S+ VYG L + +P + P+S Y+A+K + + +
Sbjct: 118 LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHL 177
Query: 262 AHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFT 321
+ YGL YGP+ P+ + L K +PI+ D RD+
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQ---IRDWL 234
Query: 322 YIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLV-SILERLLKV- 379
Y++D + + + +N+G + D+V +I + L ++
Sbjct: 235 YVEDHARALHMVVTEGKAG-------------ETYNIGGHNEKKNLDVVFTICDLLDEIV 281
Query: 380 -KAKRNIMKLPRNGDVPFTHANISL----AQRELGYKPTTDLQTGLKKFVRWYLS 429
KA ++ D P ++ RELG+KP ++G++K V WYL+
Sbjct: 282 PKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLA 336
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 205 (77.2 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 80/345 (23%), Positives = 156/345 (45%)
Query: 100 ISVLVTGAAGFVGTHVSAALKR--RGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVE 157
+S+L+TG G++G+H L + + ++ +DN ++ L++ +Q + + ++
Sbjct: 1 MSLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQ--ITNKTVTFIK 58
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
D+ D L+++F+ V+H A V + + P +Y +N++G ++LL V
Sbjct: 59 ADVCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQV 118
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTY-NHIYGLSLTGL 276
+ +V++SS++VYG N P +E T + Y TK E + S+ L
Sbjct: 119 KN-LVFSSSATVYGNNVS-PLNETMATSA-TNPYGQTKLMVEHVLFDLAKSDASWSIACL 175
Query: 277 RFFTVYG----------PWGRPDMAYFFFTRDILNR-KSIPIF-ESPD--HGTVARDFTY 322
R+F G P G P+ + + + R + + IF + D GT RD+ +
Sbjct: 176 RYFNPIGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDYIH 235
Query: 323 IDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAK 382
+ D+ +G + AL++ + NLG + V ++V+ + + K
Sbjct: 236 VVDLAQGHVKALESLGHAKGTVKG------CQAINLGTGNGTSVLEIVNTFKDISKQDIP 289
Query: 383 RNIMKLPRN-GDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ PR GD+ +A+ SLA L ++ DL ++ RW
Sbjct: 290 YQVV--PRRAGDLATVYADASLANELLDWQAKLDLTAMIQDTWRW 332
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 89/343 (25%), Positives = 142/343 (41%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNF-NDYYDPSLKKARQALLERSGIFIVEGDI 160
+LVTG AG++G+H L G V+ +DN N YD AR + R I + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAV---ARVEFIVRKSIKFFKLDL 64
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
D L ++FD V+H AA V +M+ P Y +NI G ++LL V + +
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVK-T 123
Query: 221 IVWASSSSVYGLNTK----VPFSEKDRTDQPASLYAATKKAGEEIA---HTYNHIYGLSL 273
+V++SS++VYG T+ +P E D P + Y TK A E I HT ++ + ++
Sbjct: 124 VVFSSSATVYGDATRFDNMIPIPESCPND-PTNPYGKTKYAIENIIKDLHTSDNTWRGAI 182
Query: 274 TGLRFFTVYG----------PWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYI 323
LR+F G P G P+ F + + R+ + D+ + D T I
Sbjct: 183 --LRYFNPIGAHPSGLLGEDPLGIPNNLLPFLAQVAIGRREKLLVFGDDYDS--HDGTPI 238
Query: 324 DDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKR 383
D + A R +NLG V D+ + +
Sbjct: 239 RDYIHVVDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVFDIYHAFCKEVGKDLPY 298
Query: 384 NIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
++ R GDV A+ + A EL +K + + +W
Sbjct: 299 EVVGR-RTGDVLNLTASPNRANSELKWKAELSITDACRDLWKW 340
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 200 (75.5 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 88/337 (26%), Positives = 137/337 (40%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGD--------GVLGLDNFNDYYDPSLKKARQALLERS 151
+ +LVTG AGF+G+H +L GD V +D Y +L+ +A +
Sbjct: 1 MKILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLG--YGGNLRNLAEASADPR 57
Query: 152 GIFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEV 211
F V GDI D L++ L + V H AA+ V ++ +V SN+ G LL+
Sbjct: 58 FSF-VRGDICDEGLIEGL--MARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDA 114
Query: 212 CKNANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL 271
+ + S+ VYG ++E P S YAA+K + +A Y+ +G+
Sbjct: 115 ALRHHIG-RFLHVSTDEVYGSIDTGSWAEGHPL-APNSPYAASKAGSDLLALAYHQTHGM 172
Query: 272 SLTGLRFFTVYGPWGRPD-MAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGC 330
+ R YGP P+ M F TR +L+ +P++ G RD+ ++ D +G
Sbjct: 173 DVVVTRCSNNYGPRQFPEKMIPLFVTR-LLDGLDVPVYGD---GRNIRDWLHVSDHCRGL 228
Query: 331 LAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPR 390
AL V+++G +L IL A R R
Sbjct: 229 ALALGAGRAG-------------EVYHIGGGWEATNLELTEILLEACGAPASRISFVTDR 275
Query: 391 NGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWY 427
G + S ELGY+P D G+ + V WY
Sbjct: 276 KGHDRRYSLDYSKIAGELGYRPRVDFTDGIAETVAWY 312
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 127 (49.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 47/199 (23%), Positives = 80/199 (40%)
Query: 233 NTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 292
N +P + P+S Y+A+K + + + + YGL YGP+ P+
Sbjct: 149 NEALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLI 208
Query: 293 FFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQ 352
+ L K++PI+ D RD+ Y++D + AL T
Sbjct: 209 PLVILNALEGKALPIYGKGDQ---IRDWLYVEDHAR----ALYTVVTEGKAGETYNIGGH 261
Query: 353 LRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKL--PRNGDVPFTHANISLAQRELGY 410
N+ + + DL+ E + K K+ R + R G + RELG+
Sbjct: 262 NEKKNIDVV--LTICDLLD--EIVPKEKSYREQITYVADRPGHDRRYAIDADKISRELGW 317
Query: 411 KPTTDLQTGLKKFVRWYLS 429
KP ++G++K V WYL+
Sbjct: 318 KPQETFESGIRKTVEWYLA 336
Score = 122 (48.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 100 ISVLVTGAAGFVGTHVSA-ALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVE- 157
+ +LVTG AGF+G+ V + D V+ +D Y +L+ A + S + E
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLESL--ADVSDSERYAFEH 56
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKN 214
DI D + ++F VMHLAA++ V ++ P +++ +NI G LLE +N
Sbjct: 57 ADICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARN 113
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 196 (74.1 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 77/340 (22%), Positives = 144/340 (42%)
Query: 102 VLVTGAAGFVGTHVSAALKRRG-DGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
+LVTG AGF+G+ V + R D V+ LD Y +L+ + + + DI
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLT--YAGNLESLTD-IADNPRYAFEQVDI 60
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
D A L ++F VMHLAA++ V ++ + ++ +NI G +LLE + Q
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 221 IVWASSSSVYGLNTKVPFSEKDRTDQ---------PASLYAATKKAGEEIAHTYNHIYGL 271
+ + ++T + + TD P+S Y+A+K + + + + YGL
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 272 SLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCL 331
YGP+ P+ + L+ K +P++ G RD+ +++D +
Sbjct: 181 PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGD---GMQIRDWLFVEDHARALY 237
Query: 332 AALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKL--P 389
+ E + + T + +L E+ V +++
Sbjct: 238 QVV--TEGVVGETYNIGGHNEKANIEVVKTICALLEELAP--EKPAGVARYEDLITFVQD 293
Query: 390 RNG-DVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYL 428
R G D + + + +R+LG++P ++GL+K V+WYL
Sbjct: 294 RPGHDARYA-VDTAKIRRDLGWQPLETFESGLRKTVQWYL 332
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 194 (73.4 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 88/321 (27%), Positives = 140/321 (43%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G +L+TGA GFVG ++ L G ++ + ++ A Q+L R G
Sbjct: 3 GRRILITGANGFVGGYMIRELVAAGY------QHSELHTLTVSGAEQSL--RIGQ-AHRC 53
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D A + +L V T ++HLAA A A +P++ N + L E +P
Sbjct: 54 DLRDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACSPH 113
Query: 219 PAIVWASSSSVYG--LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGL 276
+V+A SS YG NT + +P + YAATK A + +A GL+
Sbjct: 114 AVLVFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKAAAD-VALGQMRNDGLNAVRF 172
Query: 277 RFFTVYGPWGRPDMAYFFFTRDI---LNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAA 333
R F GP PD F I + P+ + + RDF + D+V+G A
Sbjct: 173 RAFNHTGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVGNLDAM-RDFVDVRDVVRGYRLA 231
Query: 334 LDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERL--LKVKAKRNIMKLPRN 391
L+T E VFNL + +P + +++ L + + + + + KL +N
Sbjct: 232 LET-ELDPVSEG---------VFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLRKN 281
Query: 392 GDVPFTHANISLAQRELGYKP 412
DVP T + + A+ ELG+ P
Sbjct: 282 -DVPRTWGDANRARTELGWVP 301
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 195 (73.7 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 87/341 (25%), Positives = 150/341 (43%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
++VTG AG++G+H L G + +DN ++ ++K+ + I DI
Sbjct: 8 IMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVES--ITGKEIEFHHVDIM 65
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
+ L ++F+ + V+H A V + + P Y ++NIAG ++LL + + +
Sbjct: 66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKK-L 124
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTY-NHIYGLSLTGLRFFT 280
V++SS++VYG VP +E D + Y TK E I + LR+F
Sbjct: 125 VFSSSATVYGDPHTVPITE-DFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLRYFN 183
Query: 281 VYG--PWGR--------PDMAYFFFTRDILNRKSI-PIF----ESPDHGTVARDFTYIDD 325
G P G P+ + T+ + ++ I IF +PD GT RDF ++ D
Sbjct: 184 PVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPD-GTGVRDFIHVVD 242
Query: 326 IVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNI 385
+ KG ++AL + +NLG V ++V L++ + I
Sbjct: 243 LAKGHISALSSLHSKKQGCVA---------YNLGTGRGYSVLEMVGALKQASHKEIPYQI 293
Query: 386 MKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
+ R GDV + A+ S A +ELG+K T + + +W
Sbjct: 294 VSR-RKGDVASSFADPSKALKELGWKATHNQDDMCRDAWKW 333
>UNIPROTKB|Q5QPP4 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
HOVERGEN:HBG001396 IPI:IPI00030229 SMR:Q5QPP4
Ensembl:ENST00000429356 Uniprot:Q5QPP4
Length = 239
Score = 162 (62.1 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 55/191 (28%), Positives = 92/191 (48%)
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D L++LF SF V+H A V ++Q P Y N+ G + LLE+ K A+
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHGV 60
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAH-------TYNHIY-- 269
+V++SS++VYG +P E T + Y +K EE+ T+N +
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 270 GLSLTGLRFFTVYG--PWGRPDMAYFFFTRDILNRK-SIPIFESP---DHGTVARDFTYI 323
+ TG G P G P+ + ++ + R+ ++ +F + + GT RD+ ++
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 180
Query: 324 DDIVKGCLAAL 334
D+ KG +AAL
Sbjct: 181 VDLAKGHIAAL 191
Score = 60 (26.2 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 390 RNGDVPFTHANISLAQRELGY 410
R GDV +AN SLAQ ELG+
Sbjct: 210 REGDVAACYANPSLAQEELGW 230
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 152 (58.6 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 50/165 (30%), Positives = 78/165 (47%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
+VL+TG G++G+ S AL V+ +DN + ++ + +R V DI
Sbjct: 5 TVLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRIELICGKRPAFHNV--DI 62
Query: 161 NDMALLKKLFDV-VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
D A L K+FD V+H AA V + + P Y N+ G +SLL + N
Sbjct: 63 TDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVCN 122
Query: 220 AIVWASSSSVYGLNTKVPFS---EKDRTDQPASLYAATKKAGEEI 261
IV++SS++VYG T+VP + P + Y TK E++
Sbjct: 123 -IVFSSSATVYGDATRVPNMIPIPEHCPIGPTNTYGRTKSTIEDV 166
Score = 88 (36.0 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 30/119 (25%), Positives = 54/119 (45%)
Query: 308 FESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVS 367
+ S D GT RD+ ++ D+ KG LAAL+ ++ +NLG+ V
Sbjct: 240 YSSRD-GTAIRDYIHVLDLAKGHLAALNYLRDNKPG---------VKAWNLGSGRGSTVF 289
Query: 368 DLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
+++ ++ ++ R GDV AN +LA +ELG+K ++ + +W
Sbjct: 290 EMIKAFSSVVGRDLPYEVVPR-RQGDVLDLTANPALANKELGWKTELRMEDACQDLWKW 347
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 122 (48.0 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 49/202 (24%), Positives = 85/202 (42%)
Query: 233 NTK-VPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMA 291
NT+ +P + P+S Y+A+K + + + + YGL YGP+ P+
Sbjct: 148 NTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKL 207
Query: 292 YFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXA 351
+ L K++PI+ D RD+ Y++D + AL T
Sbjct: 208 IPLVILNALEGKALPIYGKGDQ---IRDWLYVEDHAR----ALYTVVTEGKAGETYNIGG 260
Query: 352 QLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISL-AQ---RE 407
N+ + + DL+ E + K K+ R ++ D P ++ A+ R
Sbjct: 261 HNEKKNIDVV--LTICDLLD--EIVPKEKSYRE--QITYVADRPGHDRRYAIDAEKIGRA 314
Query: 408 LGYKPTTDLQTGLKKFVRWYLS 429
LG+KP ++G++K V WYLS
Sbjct: 315 LGWKPQETFESGIRKTVEWYLS 336
Score = 119 (46.9 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 100 ISVLVTGAAGFVGTHVSA-ALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVE- 157
+ +LVTG AGF+G+ V + D V+ +D Y A + ER ++ E
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT-YAGNRESLADVSDSER---YVFEH 56
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKN 214
DI D + ++F VMHLAA++ V ++ P +++ +NI G LLE +N
Sbjct: 57 ADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARN 113
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 193 (73.0 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 77/340 (22%), Positives = 145/340 (42%)
Query: 102 VLVTGAAGFVGTHVSAALKRRG-DGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
+LVTG AGF+G+ V + R D V+ +D Y +L+ + + + + DI
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLT--YAGNLESLTE-VADNPRYAFEQVDI 60
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
D A L ++F VMHLAA++ V ++ + ++ +NI G +LLE + Q
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 221 IVWASSSSVYGLNTKVPFSEKDRTDQ---------PASLYAATKKAGEEIAHTYNHIYGL 271
+ + ++T + + TD P+S Y+A+K + + + + YGL
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 272 SLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCL 331
YGP+ P+ + L+ K +P++ G RD+ +++D +
Sbjct: 181 PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGD---GMQIRDWLFVEDHARALY 237
Query: 332 AALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKL--P 389
+ E + + T + +L E+ V +++
Sbjct: 238 QVV--TEGVVGETYNIGGHNEKANIEVVKTICALLEELAP--EKPAGVARYEDLITFVQD 293
Query: 390 RNG-DVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYL 428
R G DV + + + +R+LG+ P ++GL+K V+WYL
Sbjct: 294 RPGHDVRYA-VDAAKIRRDLGWLPLETFESGLRKTVQWYL 332
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 95/352 (26%), Positives = 151/352 (42%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
+VLVTG AG++G+H L +G V+ +DN + ++ + + L + IF + D+
Sbjct: 8 TVLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEK-LTGKKVIFH-QVDL 65
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
D L K+F + + V+H A V ++Q P SY +NI+G ++L+E K N +
Sbjct: 66 LDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRD- 124
Query: 221 IVWASSSSVYGLNTK----VPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIY-GLSLTG 275
V++SS++VYG T+ +P E + S Y TK E I + L+
Sbjct: 125 FVFSSSATVYGDPTRPGGTIPIPESCPREG-TSPYGRTKLFIENIIEDETKVNKSLNAAL 183
Query: 276 LRFFTVYG----------PWGRPDMAYFFFTRDILNRKS-IPIFESPDHGTVARDFTYID 324
LR+F G P G P+ + + + R + +F D+ T D T I
Sbjct: 184 LRYFNPGGAHPSGELGEDPLGIPNNLLPYIAQVAVGRLDHLNVF-GDDYPT--SDGTPIR 240
Query: 325 DIVKGCLAALDTAEXXXXXXXXXXXX-AQLRVFNLGNTSPVPVSDLVSILERLLKVKAKR 383
D + C D AE R +NLG+ + S + +L K +
Sbjct: 241 DYIHVC----DLAEAHVAALDYLRQHFVSCRPWNLGSGTG---STVFQVLNAFSKAVGRD 293
Query: 384 NIMKL-PRN-GDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYAG 433
K+ PR GDV AN + A EL +K + + RW Y G
Sbjct: 294 LPYKVTPRRAGDVVNLTANPTRANEELKWKTSRSIYEICVDTWRWQQKYPYG 345
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 189 (71.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 78/331 (23%), Positives = 142/331 (42%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
L+TG AGFVG +++ L + V G N+ P+++ ++ DI D
Sbjct: 4 LITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVE-------------MISLDIMD 50
Query: 163 MALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIV 222
+KK+ + ++ HLAA++ V+ + N +N+ G + +L+ +++N I+
Sbjct: 51 SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL 110
Query: 223 WASSSSVYG--LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 280
SS YG L + P SE+++ +P S Y +K + +A Y YG+ + R F
Sbjct: 111 TIGSSEEYGMILPEESPVSEENQL-RPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFN 169
Query: 281 VYGPWGRPDMAYFFFTRDILN---RKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTA 337
GP F + I++ K PI + + V RDFT + DIV+
Sbjct: 170 HIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAV-RDFTDVRDIVQAYWLLSQYG 228
Query: 338 EXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLP-RNGDVPF 396
+ V+N+ + + D++ +L + VK + L R +VP
Sbjct: 229 KTGD-------------VYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPT 275
Query: 397 THANISLAQRELGYKPTTDLQTGLKKFVRWY 427
+ + G+KP L+ L + ++ Y
Sbjct: 276 LIGSNKRLKDSTGWKPRIPLEKSLFEILQSY 306
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 190 (71.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 84/340 (24%), Positives = 147/340 (43%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+ + +TGA GF+ +H++ LK G V+ +D+ K + + E +F E
Sbjct: 28 LKISITGAGGFIASHIARRLKHEGHYVIA----SDW------KKNEHMTE--DMFCDEFH 75
Query: 160 INDMALLKKLFDVVS-FTHVMHLAAQ-AGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
+ D+ +++ V HV +LAA G+ + N + +++N +++E + N
Sbjct: 76 LVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAAR-ING 134
Query: 218 QPAIVWASSSSVYGL-----NTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL 271
+ASS+ +Y T V E D +P Y K A EE+ YN +G+
Sbjct: 135 IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGI 194
Query: 272 SLTGLRFFTVYGP---W-GRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIV 327
RF +YGP W G + A F R + S FE G R FT+ID+ V
Sbjct: 195 ECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA--QTSTDRFEMWGDGLQTRSFTFIDECV 252
Query: 328 KGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKR-NIM 386
+G L L ++ N+G+ V ++++ E +L + K+ I
Sbjct: 253 EGVLR-LTKSDFR-------------EPVNIGSDEMVSMNEMA---EMVLSFEEKKLPIH 295
Query: 387 KLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
+P V +++ +L + +LG+ P L+ GL+ W
Sbjct: 296 HIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFW 335
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 186 (70.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 82/342 (23%), Positives = 146/342 (42%)
Query: 101 SVLVTGAAGFVGTHVSA-ALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
++LVTG AGF+G+ V ++ D V+ LD Y +L+ + + + D
Sbjct: 8 NILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLT--YAGNLESLTD-IADNPRYAFEQVD 64
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKN----- 214
I D A L ++F VMHLAA++ V A+ + ++ +NI G LLE +
Sbjct: 65 ICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQM 124
Query: 215 -ANPQPAIVW--ASSSSVYG-LN-TKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIY 269
+ + A + S+ VYG L+ T F+E P+S Y+A+K A + + + Y
Sbjct: 125 PSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPY-APSSPYSASKAAADHLVRAWQRTY 183
Query: 270 GLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKG 329
L YGP P+ + L+ K +P++ G RD+ +++D +
Sbjct: 184 RLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGD---GAQIRDWLFVEDHARA 240
Query: 330 CLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKL- 388
+ E + + T + +L E+ V +++
Sbjct: 241 LYQVV--TEGVVGETYNIGGHNEKTNLEVVKTICALLEELAP--EKPAGVARYEDLITFV 296
Query: 389 -PRNG-DVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYL 428
R G D + + + +R+LG+ P ++GL+K V+WYL
Sbjct: 297 QDRPGHDARYA-VDAAKIRRDLGWLPLETFESGLRKTVQWYL 337
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 192 (72.6 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 93/343 (27%), Positives = 139/343 (40%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNF-NDYYDPSLKKARQALLERSGIFIVEGDI 160
VLVTG AG++G+H L G + DN N YD AR +L + I E D+
Sbjct: 14 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYD---SVARLEVLTKHHIPFYEVDL 70
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
D L+K+F V+H A V + Q P Y H+NI G V LLE+ + N
Sbjct: 71 CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSK- 129
Query: 221 IVWASSSSVYGLNTK----VPFSEKDRTDQPASLYAATKKAGEEIAHT-YNHIY-GLSLT 274
V++SS++VYG T+ +P E+ P + Y TK A E I + YN
Sbjct: 130 FVFSSSATVYGDATRFPNMIPIPEECPLG-PTNPYGHTKYAIENILNDLYNSDKKSWKFA 188
Query: 275 GLRFFTVYG----------PWGRPDMAYFFFTRDILNRKS-IPIFESPDHGTVARDFTYI 323
LR+F G P G P+ + + + R+ + IF D+ + RD T I
Sbjct: 189 ILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIF-GDDYDS--RDGTPI 245
Query: 324 DDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKR 383
D + A R +NLG+ V ++ + +
Sbjct: 246 RDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY 305
Query: 384 NIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
+ R GDV A A+REL ++ ++ K +W
Sbjct: 306 KVTGR-RAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKW 347
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 184 (69.8 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 79/326 (24%), Positives = 147/326 (45%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGV--LGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
++V+G AGF+G H + ++ +D N Y + + L S V D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN--YASNATEIEN-LKSFSNFEFVHLD 65
Query: 160 INDMALLKKLFDVV-SFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
++D L+ L + + T +++ AA++ V + ++P + +NI +LLE C NP
Sbjct: 66 LSDN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 219 PA-IVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ S+ VYG + ++++ P + Y+A+K A + I +Y + Y L +T LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 278 FFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTA 337
VYGP P+ + I +K IP+ GT R + Y+ DIV A++T
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGK---GTNKRKYLYVLDIV----LAIETV 234
Query: 338 EXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLP-RN-GDVP 395
+++N+G T + D +S+++ ++++ + I + RN D
Sbjct: 235 WIKNPMTTVN------QIYNIGGTDEL---DNLSLIKLIMEIFGRGEIQFIKDRNYNDTN 285
Query: 396 FTHANISLAQRELGYKPTTDLQTGLK 421
++ + LG+ P L GL+
Sbjct: 286 YSIDTTKI--HNLGWSPKISLVQGLQ 309
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 184 (69.8 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 79/326 (24%), Positives = 147/326 (45%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGV--LGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
++V+G AGF+G H + ++ +D N Y + + L S V D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN--YASNATEIEN-LKSFSNFEFVHLD 65
Query: 160 INDMALLKKLFDVV-SFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
++D L+ L + + T +++ AA++ V + ++P + +NI +LLE C NP
Sbjct: 66 LSDN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 219 PA-IVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ S+ VYG + ++++ P + Y+A+K A + I +Y + Y L +T LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 278 FFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTA 337
VYGP P+ + I +K IP+ GT R + Y+ DIV A++T
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGK---GTNKRKYLYVLDIV----LAIETV 234
Query: 338 EXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLP-RN-GDVP 395
+++N+G T + D +S+++ ++++ + I + RN D
Sbjct: 235 WIKNPMTTVN------QIYNIGGTDEL---DNLSLIKLIMEIFGRGEIQFIKDRNYNDTN 285
Query: 396 FTHANISLAQRELGYKPTTDLQTGLK 421
++ + LG+ P L GL+
Sbjct: 286 YSIDTTKI--HNLGWSPKISLVQGLQ 309
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 120 (47.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 43/190 (22%), Positives = 80/190 (42%)
Query: 247 PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIP 306
P+S Y+A+K + + + + YGL YGP+ P+ + L K++P
Sbjct: 163 PSSPYSASKASSDHLVRAWKRTYGLPTIVSNCSNNYGPYHFPEKLIPLVILNALEGKALP 222
Query: 307 IFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPV 366
I+ D RD+ Y++D + + + +N+G +
Sbjct: 223 IYGKGDQ---IRDWLYVEDHARALYTVVTEGKAG-------------ETYNIGGHNEKKN 266
Query: 367 SDLV-SILERLLKV--KAKRNIMKLPRNGDVPFTHANISL----AQRELGYKPTTDLQTG 419
D+V +I + L ++ K K ++ D P ++ RELG+KP ++G
Sbjct: 267 IDVVFTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESG 326
Query: 420 LKKFVRWYLS 429
++K V WYL+
Sbjct: 327 IRKTVEWYLA 336
Score = 110 (43.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 100 ISVLVTGAAGFVGTHVSA-ALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
+ +LVTG AGF+G+ V + D V+ +D Y +L+ + + +
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLESLAE-ISDSERYSFENA 57
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKN 214
DI D F VMHLAA++ V ++ P +++ +NI G LLE +N
Sbjct: 58 DICDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARN 113
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 82/345 (23%), Positives = 142/345 (41%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+ +L++G AG++G+H + + LDN + K A + L + E D
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSK----GSKIAIEDLQKIRAFKFFEQD 56
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
++D +K LF+ F ++H AA V +MQNP Y +N +L+E C
Sbjct: 57 LSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNK 116
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEI---AHTYNHIYGLSLTGL 276
+++S+++ YG + P + P + Y +K EE+ A N + + L
Sbjct: 117 -FIFSSTAATYG-EPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCI--L 172
Query: 277 RFFTVYGPWGRPDMAYFFFTRDIL----------NRKSIPIF-ESPD--HGTVARDFTYI 323
R+F V G + + +L R + IF + D GT RDF ++
Sbjct: 173 RYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHV 232
Query: 324 DDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKR 383
DDI LA LD + + VFN+G V +++ ++++ V K
Sbjct: 233 DDISSAHLATLDYLQEN-----------ESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKV 281
Query: 384 NIMKLPRN-GDVPFTHANISLAQRELGYKPT-TDLQTGLKKFVRW 426
+ PR GD ++ S + ++P DL+ K W
Sbjct: 282 ELA--PRRAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDW 324
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 181 (68.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 64/240 (26%), Positives = 108/240 (45%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+LVTG AGF+G+H+ L +G VL LDNF + S K+ L++ ++ DI
Sbjct: 3 ILVTGGAGFIGSHLCERLLEQGHDVLCLDNF---FTGS-KRNIDRLMDFHRFEVIRHDII 58
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
+ LL+ + +LA A + NP + +++ G +++L + K + I
Sbjct: 59 EPILLE-------VDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRAR--I 109
Query: 222 VWASSSSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG T P E + P S Y K+ E + Y+ G+ + R
Sbjct: 110 LQASTSEVYGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIAR 169
Query: 278 FFTVYGP-WGRPD-MAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F YGP D F L + + ++ G+ R F Y+DD++ G + ++
Sbjct: 170 IFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGD---GSQTRSFCYVDDLLDGLVTLME 226
Score = 131 (51.2 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 58/256 (22%), Positives = 104/256 (40%)
Query: 178 VMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKVP 237
+ +LA A + NP + +++ G +++L + K + I+ AS+S VYG T P
Sbjct: 68 IYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRAR--ILQASTSEVYGDPTIHP 125
Query: 238 FSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYF 293
E + P S Y K+ E + Y+ G+ + R F YGP
Sbjct: 126 QPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMAEHDGRV 185
Query: 294 FFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQL 353
+ + + D G+ R F Y+DD++ G + ++ +
Sbjct: 186 VSNFVVQALRGEDLTVYGD-GSQTRSFCYVDDLLDGLVTLMEHDQFCGPV---------- 234
Query: 354 RVFNLGNTSPVPVSDLVSILERLLKVKAKRN-IMKLPRNGDVPFTHA-NISLAQRELGYK 411
NLGN P+ + R++ + + I+ P D P +I+LA+ LG++
Sbjct: 235 ---NLGNPEETPI---IEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWE 288
Query: 412 PTTDLQTGLKKFVRWY 427
P L GL K + ++
Sbjct: 289 PRVSLDEGLAKTIEYF 304
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 183 (69.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 65/241 (26%), Positives = 103/241 (42%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H+ L G V+ LDN Y KK + + +V D+
Sbjct: 139 ILITGGAGFVGSHLVDKLMLDGHEVIALDN----YFTGRKKNVEHWIGHPNFEMVHHDV- 193
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
+ F V + HLA+ A + M NP + +N G +++L + K + +
Sbjct: 194 ----VNPYF--VEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRV--KATV 245
Query: 222 VWASSSSVYGLNTKVPFSEKD----RTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG P E T P + Y K+ E + YN + + R
Sbjct: 246 LLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIAR 305
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F +GP + F L K I I+ +GT R F Y+ D+V G + ++
Sbjct: 306 IFNTFGPRMHMNDGRVVSNFIIQALQDKPITIY---GNGTQTRSFQYVTDLVDGLIKLMN 362
Query: 336 T 336
+
Sbjct: 363 S 363
Score = 135 (52.6 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 60/260 (23%), Positives = 102/260 (39%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
V + HLA+ A + M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 199 VEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRV--KATVLLASTSEVYGD 256
Query: 233 NTKVPFSEKD----RTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRP 288
P E T P + Y K+ E + YN + + R F +GP
Sbjct: 257 PEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTFGPRMHM 316
Query: 289 DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXX 348
+ I + PI +GT R F Y+ D+V G + +++
Sbjct: 317 NDGRVVSNFIIQALQDKPI-TIYGNGTQTRSFQYVTDLVDGLIKLMNS------------ 363
Query: 349 XXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRE 407
L V N+GN + +I+ L+ I+ L D P +I A +
Sbjct: 364 -NYSLPV-NIGNPEEHTIGQFATIIRDLVPGSTSE-IVNLESQQDDPQQRRPDIRRAAEQ 420
Query: 408 LGYKPTTDLQTGLKKFVRWY 427
+ + P ++ GL K V ++
Sbjct: 421 ISWAPQVHMKDGLLKTVDYF 440
>UNIPROTKB|Q5QPP3 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 TIGRFAMs:TIGR01179 EMBL:AL031295
UniGene:Hs.632380 HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644339
SMR:Q5QPP3 Ensembl:ENST00000418277 Uniprot:Q5QPP3
Length = 227
Score = 165 (63.1 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 62/232 (26%), Positives = 106/232 (45%)
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D L++LF SF V+H A V ++Q P Y N+ G + LLE+ K A+
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHGV 60
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAH-------TYNHIY-- 269
+V++SS++VYG +P E T + Y +K EE+ T+N +
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 270 GLSLTGLRFFTVYG--PWGRPDMAYFFFTRDILNRK-SIPIFESP---DHGTVARDFTYI 323
+ TG G P G P+ + ++ + R+ ++ +F + + GT RD+ ++
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 180
Query: 324 DDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILER 375
D+ KG +AAL + R++NLG + V +V +E+
Sbjct: 181 VDLAKGHIAALRKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAMEK 222
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 179 (68.1 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 76/327 (23%), Positives = 140/327 (42%)
Query: 102 VLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
+L++G AGF+G+H V ++ + V+ DN+ +LKK + ++ D+
Sbjct: 47 ILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKK----WIGHPRFELIRHDV 102
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
+ L++ + HLA A + NP + +N+ G +++L + K +
Sbjct: 103 TEPLLIE-------VDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 153
Query: 221 IVWASSSSVYG--LNTKVPFSEKDRTDQPA--SLYAATKKAGEEIAHTYNHIYGLSLTGL 276
I+ S+S VYG L P S + S Y K+ E + Y+ +G+ +
Sbjct: 154 ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 213
Query: 277 RFFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAAL 334
R F YGP D F L +++ + + P GT R F Y+ D+V G + +
Sbjct: 214 RIFNTYGPRMNIDDGRVVSNFIAQALRGEALTV-QKP--GTQTRSFCYVSDMVDGLIRLM 270
Query: 335 DTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVS-ILERLLKVKAKRNIMKLPRNGD 393
+ + + + N G + V +++ V ++ +++K N PR
Sbjct: 271 EGNDT-----------GPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRK 319
Query: 394 VPFTHANISLAQRELGYKPTTDLQTGL 420
P +IS A+ LG++P L+ GL
Sbjct: 320 -P----DISKAKEVLGWEPKVKLREGL 341
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 178 (67.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 75/331 (22%), Positives = 142/331 (42%)
Query: 98 NGISVLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIV 156
+ + +L++G AGF+G+H V ++ + V+ DN+ +LKK + ++
Sbjct: 27 SNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKK----WIGHPRFELI 82
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
D+ + L++ + HLA A + NP + +N+ G +++L + K
Sbjct: 83 RHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 135
Query: 217 PQPAIVWASSSSVYG--LNTKVPFSEKDRTDQPA--SLYAATKKAGEEIAHTYNHIYGLS 272
+ I+ S+S VYG L P S + S Y K+ E + Y+ +G+
Sbjct: 136 AR--ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 193
Query: 273 LTGLRFFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGC 330
+ R F YGP D F L +++ + + P GT R F Y+ D+V G
Sbjct: 194 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTV-QKP--GTQTRSFCYVSDMVDGL 250
Query: 331 LAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVS-ILERLLKVKAKRNIMKLP 389
+ ++ + + + N G + V +++ V ++ +++K N P
Sbjct: 251 MRLMEGDDT-----------GPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDP 299
Query: 390 RNGDVPFTHANISLAQRELGYKPTTDLQTGL 420
R P +I+ A+ LG++P L+ GL
Sbjct: 300 RQRK-P----DITKAKEVLGWEPKVKLREGL 325
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 62/245 (25%), Positives = 109/245 (44%)
Query: 98 NGISVLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIV 156
+ + +LVTG AGF+G+H V ++ + V+ DN+ +LKK + ++
Sbjct: 29 SNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKK----WIGHPRFELI 84
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
D+ + LF V + HLA A + NP + +N+ G +++L + K
Sbjct: 85 RHDVTE-----PLF--VEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 137
Query: 217 PQPAIVWASSSSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLS 272
+ I+ S+S VYG P +E + P S Y K+ E + Y+ +G+
Sbjct: 138 AR--ILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 195
Query: 273 LTGLRFFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGC 330
+ R F YGP D F L +++ + + P GT R F Y+ D+V+G
Sbjct: 196 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTV-QKP--GTQTRSFCYVSDMVEGL 252
Query: 331 LAALD 335
+ ++
Sbjct: 253 MRLME 257
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 60/253 (23%), Positives = 100/253 (39%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
V + HLA A + NP + +N+ G +++L + K + I+ S+S VYG
Sbjct: 94 VEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSEVYGD 151
Query: 233 NTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRP 288
P +E + P S Y K+ E + Y+ +G+ + R F YGP
Sbjct: 152 PLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 211
Query: 289 DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXX 348
D + I GT R F Y+ D+V+G + ++
Sbjct: 212 DDGRVV-SNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLME------------- 257
Query: 349 XXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRE 407
Q N+GN + +L ++ L+K + I + D P +IS A+
Sbjct: 258 -GDQTGPINIGNPGEFTMVELAETVKELIKPDVE--IKMVENTPDDPRQRKPDISKAKEV 314
Query: 408 LGYKPTTDLQTGL 420
LG++P L+ GL
Sbjct: 315 LGWEPKVKLREGL 327
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 63/239 (26%), Positives = 105/239 (43%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H+ L +G V+ +DNF K+ + L ++ DI
Sbjct: 118 ILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFT----GRKRNVEHWLGHENFELIHHDI- 172
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
+ LF + + HLA+ A + M NP + +N G +++L + K + I
Sbjct: 173 ----VNPLF--IEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVLI 226
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
AS+S VYG T P E + P + Y K+ E +++ Y + + R
Sbjct: 227 --ASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVAR 284
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAAL 334
F YGP + F L ++I ++ +G R F Y+ D+V G +A +
Sbjct: 285 IFNTYGPRMHMNDGRVVSNFILQALRNETITVY---GNGKQTRSFQYVSDLVDGMIALM 340
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 59/267 (22%), Positives = 109/267 (40%)
Query: 165 LLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWA 224
++ LF + + HLA+ A + M NP + +N G +++L + K + I A
Sbjct: 172 IVNPLF--IEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVLI--A 227
Query: 225 SSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 280
S+S VYG T P E + P + Y K+ E +++ Y + + R F
Sbjct: 228 STSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFN 287
Query: 281 VYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXX 340
YGP + + IL +G R F Y+ D+V G +A +
Sbjct: 288 TYGPRMHMNDGRVV-SNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALM------ 340
Query: 341 XXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHAN 400
+ NLGN + + I+++L+ + K + D +
Sbjct: 341 --------ASNYTQPVNLGNPVEQTIGEFAEIIKKLVGGPSVIKQSKAMED-DPQRRKPD 391
Query: 401 ISLAQRELGYKPTTDLQTGLKKFVRWY 427
I+ A++ L ++P L+TGL++ + ++
Sbjct: 392 ITRARQLLHWEPKVPLETGLQRTISYF 418
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 149 (57.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 45/139 (32%), Positives = 67/139 (48%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKA-RQALLERSGIFIVEGD 159
SVLVTG G++G+ + AL G V+ DN Y+ S + R L+ + D
Sbjct: 5 SVLVTGGTGYIGSFTTLALLEAGYKVVVADNL---YNSSAEALNRIELISGKKAEFAQLD 61
Query: 160 INDMALLKKLFDV-VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
+ D A K+F+ V+H AA V + + P Y H N+ G + LL N
Sbjct: 62 VTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVT 121
Query: 219 PAIVWASSSSVYGLNTKVP 237
IV++SS++VYG T+ P
Sbjct: 122 N-IVFSSSATVYGDATRFP 139
Score = 64 (27.6 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 30/120 (25%), Positives = 48/120 (40%)
Query: 308 FESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVS 367
+ S D GT RD+ +I D+ G L AL+ +R +NLG V
Sbjct: 242 YASHD-GTAIRDYIHILDLADGHLKALNYLRANNPG---------VRAWNLGTGRGSTVY 291
Query: 368 DLVSILERLLKVKAKRNIMKLPRN-GDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
+++ + + + PR GDV +N + A ELG+K L+ + W
Sbjct: 292 EMIRAFSKAVGRDLPYEVA--PRRAGDVLNLTSNPTRANTELGWKAQRTLEQACEDLWLW 349
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 167 (63.8 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 78/345 (22%), Positives = 130/345 (37%)
Query: 102 VLVTGAAGFVGT-HVSAALKR-RGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
VL+TG GF+G+ +++ + + + D + S + + E VE
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFINYDKLA--FGASPLHVEKEIRESPRYKFVEAA 68
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
+ D L K V+H AA V + + + NI +LLE N+ P
Sbjct: 69 LEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNS-PYK 127
Query: 220 AI---VWASSSSVYG--LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLT 274
+ V S+ VYG P SE P + YAA+K A E + +Y H Y L
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 275 GLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAAL 334
+R VYGP FT+ L+ K P+ H R + Y++D C A+
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLH---TRSWMYVED----CSEAI 240
Query: 335 DTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDV 394
+ N+ T + + + +L R I P + D
Sbjct: 241 TRVALEGTLGEIYNIGTDFEMTNIELTKMIHFT-VSKLLNREPTAPTFAPIPDRPYH-DR 298
Query: 395 PFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYAGGKKAAG 439
+ + + S + +G++ TT GL K + +Y+ + + G
Sbjct: 299 RY-YIDFSKIRNAMGWQCTTPFSEGLMKTIDYYVKLHVATARLQG 342
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 109 (43.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 100 ISVLVTGAAGFVGTHVSA-ALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
+ +LVTG AGF+G+ V + D V+ +D Y +L+ ++ + +
Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLT--YAGNLESLT-SVADSPRYTFEKV 57
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKN 214
DI D L+++F + VMHLAA++ V ++ ++ +NI G +LLE ++
Sbjct: 58 DICDRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARH 113
Score = 103 (41.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 43/186 (23%), Positives = 73/186 (39%)
Query: 247 PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIP 306
P+S Y+A+K + + + + YG YGP+ P+ + L K +P
Sbjct: 181 PSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP 240
Query: 307 IFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPV 366
I+ D RD+ Y++D + + E + R NL V
Sbjct: 241 IYGKGDQ---IRDWLYVEDHARALFKVV--TEGKVGETYNIGGHNEKR--NLE-----VV 288
Query: 367 SDLVSILERLLKVK---AKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKF 423
+ SIL+ L+ A++ R G + + EL ++P +TGL+K
Sbjct: 289 QTICSILDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGLRKT 348
Query: 424 VRWYLS 429
V WYL+
Sbjct: 349 VEWYLA 354
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 165 (63.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 88
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 89 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 200
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F +GP + F L + + ++ S G+ R F Y+ D+V G +A ++
Sbjct: 201 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVALMN 257
Query: 336 T 336
+
Sbjct: 258 S 258
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 61/271 (22%), Positives = 108/271 (39%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
+ + HLA+ A M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 94 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGD 151
Query: 233 NTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRP 288
P SE + P + Y K+ E + + Y G+ + R F +GP
Sbjct: 152 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 211
Query: 289 DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXX 348
+ + + P+ G+ R F Y+ D+V G +A +++
Sbjct: 212 NDGRVVSNFILQALQGEPLTVYGS-GSQTRAFQYVSDLVNGLVALMNSNVSSPV------ 264
Query: 349 XXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRE 407
NLGN + + +++ L V + I L D P +I A+
Sbjct: 265 --------NLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 314
Query: 408 LGYKPTTDLQTGLKKFVRWY---LSYYAGGK 435
LG++P L+ GL K + ++ L Y A +
Sbjct: 315 LGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 345
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 85 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 139
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 140 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 191
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 192 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 251
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F +GP + F L + + ++ S G+ R F Y+ D+V G +A ++
Sbjct: 252 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVALMN 308
Query: 336 T 336
+
Sbjct: 309 S 309
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F +GP + F L + + ++ S G+ R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVALMN 314
Query: 336 T 336
+
Sbjct: 315 S 315
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 61/271 (22%), Positives = 108/271 (39%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
+ + HLA+ A M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 151 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGD 208
Query: 233 NTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRP 288
P SE + P + Y K+ E + + Y G+ + R F +GP
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 289 DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXX 348
+ + + P+ G+ R F Y+ D+V G +A +++
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGS-GSQTRAFQYVSDLVNGLVALMNSNVSSPV------ 321
Query: 349 XXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRE 407
NLGN + + +++ L V + I L D P +I A+
Sbjct: 322 --------NLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371
Query: 408 LGYKPTTDLQTGLKKFVRWY---LSYYAGGK 435
LG++P L+ GL K + ++ L Y A +
Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F +GP + F L + + ++ S G+ R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVALMN 314
Query: 336 T 336
+
Sbjct: 315 S 315
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 61/271 (22%), Positives = 108/271 (39%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
+ + HLA+ A M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 151 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGD 208
Query: 233 NTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRP 288
P SE + P + Y K+ E + + Y G+ + R F +GP
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 289 DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXX 348
+ + + P+ G+ R F Y+ D+V G +A +++
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGS-GSQTRAFQYVSDLVNGLVALMNSNVSSPV------ 321
Query: 349 XXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRE 407
NLGN + + +++ L V + I L D P +I A+
Sbjct: 322 --------NLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371
Query: 408 LGYKPTTDLQTGLKKFVRWY---LSYYAGGK 435
LG++P L+ GL K + ++ L Y A +
Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F +GP + F L + + ++ S G+ R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVALMN 314
Query: 336 T 336
+
Sbjct: 315 S 315
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 61/271 (22%), Positives = 108/271 (39%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
+ + HLA+ A M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 151 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGD 208
Query: 233 NTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRP 288
P SE + P + Y K+ E + + Y G+ + R F +GP
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 289 DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXX 348
+ + + P+ G+ R F Y+ D+V G +A +++
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGS-GSQTRAFQYVSDLVNGLVALMNSNVSSPV------ 321
Query: 349 XXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRE 407
NLGN + + +++ L V + I L D P +I A+
Sbjct: 322 --------NLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371
Query: 408 LGYKPTTDLQTGLKKFVRWY---LSYYAGGK 435
LG++P L+ GL K + ++ L Y A +
Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F +GP + F L + + ++ S G+ R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVALMN 314
Query: 336 T 336
+
Sbjct: 315 S 315
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 61/271 (22%), Positives = 108/271 (39%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
+ + HLA+ A M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 151 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGD 208
Query: 233 NTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRP 288
P SE + P + Y K+ E + + Y G+ + R F +GP
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 289 DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXX 348
+ + + P+ G+ R F Y+ D+V G +A +++
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGS-GSQTRAFQYVSDLVNGLVALMNSNVSSPV------ 321
Query: 349 XXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRE 407
NLGN + + +++ L V + I L D P +I A+
Sbjct: 322 --------NLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371
Query: 408 LGYKPTTDLQTGLKKFVRWY---LSYYAGGK 435
LG++P L+ GL K + ++ L Y A +
Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 59/242 (24%), Positives = 108/242 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 92 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 146
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 147 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 198
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQ-----PASLYAATKKAGEEIAHTYNHIYGLSLTGL 276
+ AS+S VYG + +V +D P + Y K+ E + + Y G+ +
Sbjct: 199 LLASTSEVYG-DPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 257
Query: 277 RFFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAAL 334
R F +GP + F L + + ++ P GT R F Y+ D+V G +A +
Sbjct: 258 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GP--GTQTRAFQYVSDLVNGLVALM 314
Query: 335 DT 336
++
Sbjct: 315 NS 316
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 61/272 (22%), Positives = 110/272 (40%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
+ + HLA+ A M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 152 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYG- 208
Query: 233 NTKVPFSEKDRTDQ-----PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGR 287
+ +V +D P + Y K+ E + + Y G+ + R F +GP
Sbjct: 209 DPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMH 268
Query: 288 PDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXX 347
+ + + P+ GT R F Y+ D+V G +A +++
Sbjct: 269 MNDGRVVSNFILQALQGEPLTVYGP-GTQTRAFQYVSDLVNGLVALMNSNVSSPV----- 322
Query: 348 XXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQR 406
NLGN + + ++++L V + I L D P +I A+
Sbjct: 323 ---------NLGNPEEHTILEFAQLIKKL--VGSGSEIQFLSEAQDDPQKRKPDIRKAKL 371
Query: 407 ELGYKPTTDLQTGLKKFVRWY---LSYYAGGK 435
LG++P L+ GL K + ++ L Y A +
Sbjct: 372 LLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 403
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 53/190 (27%), Positives = 89/190 (46%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+ V +TGA G +G+H++ L G V + Y P++ + L+ +G E D
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLAAGHDV-----YATYCRPTIDPSD---LQFNG---AEVD 49
Query: 160 INDMALLKKLFD-VVSFTH--VMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
I D ++D + +F V HLAAQ+ + P + +N+ G + E +
Sbjct: 50 ITDWC---SVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVR 106
Query: 217 PQPAIVWASSSSVYGL--NTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLT 274
P I+ A SS+ YG ++VP +E+ R +P Y +K A + +A+ Y+ YG+
Sbjct: 107 PHAKIIVAGSSAEYGFVDPSEVPINER-RELRPLHPYGVSKAATDMLAYQYHKSYGMHTV 165
Query: 275 GLRFFTVYGP 284
R F GP
Sbjct: 166 VARIFNCTGP 175
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 163 (62.4 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+LVTG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 91 ILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG P +E + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F +GP + F L + + ++ S G+ R F Y+ D+V G +A ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVALMN 314
Query: 336 T 336
+
Sbjct: 315 S 315
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 60/271 (22%), Positives = 108/271 (39%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
+ + HLA+ A M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 151 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGD 208
Query: 233 NTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRP 288
P +E + P + Y K+ E + + Y G+ + R F +GP
Sbjct: 209 PEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 289 DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXX 348
+ + + P+ G+ R F Y+ D+V G +A +++
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGS-GSQTRAFQYVSDLVNGLVALMNSNVSSPV------ 321
Query: 349 XXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRE 407
NLGN + + +++ L V + I L D P +I A+
Sbjct: 322 --------NLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371
Query: 408 LGYKPTTDLQTGLKKFVRWY---LSYYAGGK 435
LG++P L+ GL K + ++ L Y A +
Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 162 (62.1 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 58/241 (24%), Positives = 107/241 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 68 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 122
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 123 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 174
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
+ AS+S VYG P +E + P + Y K+ E + + Y G+ + R
Sbjct: 175 LLASTSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 234
Query: 278 FFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F +GP + F L + + ++ S G+ R F Y+ D+V G +A ++
Sbjct: 235 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVALMN 291
Query: 336 T 336
+
Sbjct: 292 S 292
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 60/271 (22%), Positives = 108/271 (39%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
+ + HLA+ A M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 128 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGD 185
Query: 233 NTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRP 288
P +E + P + Y K+ E + + Y G+ + R F +GP
Sbjct: 186 PEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 245
Query: 289 DMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXX 348
+ + + P+ G+ R F Y+ D+V G +A +++
Sbjct: 246 NDGRVVSNFILQALQGEPLTVYGS-GSQTRAFQYVSDLVNGLVALMNSNVSSPV------ 298
Query: 349 XXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRE 407
NLGN + + +++ L V + I L D P +I A+
Sbjct: 299 --------NLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 348
Query: 408 LGYKPTTDLQTGLKKFVRWY---LSYYAGGK 435
LG++P L+ GL K + ++ L Y A +
Sbjct: 349 LGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 379
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 160 (61.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 84/344 (24%), Positives = 146/344 (42%)
Query: 101 SVLVTGAAGFVGTH-VSAALKRRGD-GVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
+++VTG AGF+G++ V D V LD Y + + L +R + +V G
Sbjct: 6 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT--YAGNRANLEEILGDR--VELVVG 61
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D L+ KL ++H AA++ ++++P+ ++++N G LLE + + +
Sbjct: 62 DIADSELVDKL--AAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIR 119
Query: 219 PAIVWASSSSVYG---LNTKVPF-----SEKDRTD---QPASLYAATKKAGEEIAHTYNH 267
V S+ VYG L +P EK + P+S Y++TK A + I +
Sbjct: 120 FHHV--STDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVR 177
Query: 268 IYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIV 327
+G+ T YGP+ + F R I N S + G RD+ + +D
Sbjct: 178 SFGVKATISNCSNNYGPYQHIEK---FIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHS 234
Query: 328 KGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMK 387
G A L G + V +L ILE++ + K + +
Sbjct: 235 TGVWAILTKGRIGETYLIGAD----------GEKNNKEVLEL--ILEKMSQPKNAYDHVT 282
Query: 388 LPRNGDVPFTHANISLAQRELGYKPT-TDLQTGLKKFVRWYLSY 430
D+ + + L + ELG+KP T+ + GL+ ++WY +
Sbjct: 283 DRAGHDLRYAIDSTKLRE-ELGWKPQFTNFEEGLEDTIKWYTEH 325
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 162 (62.1 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 62/244 (25%), Positives = 104/244 (42%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G+ V+VTG AGFVG+H+ L RGD V+ +DNF K+ ++
Sbjct: 118 GLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFT----GRKENVMHHFSNPNFEMIRH 173
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAG-VRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
D+ + LL+ + HLA A V Y NP + +N+ G +++L + K
Sbjct: 174 DVVEPILLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 225
Query: 218 QPAIVWASSSSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSL 273
+ + S+S VYG + P E + P S Y K+ E + Y+ + +
Sbjct: 226 R--FLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEV 283
Query: 274 TGLRFFTVYGPWGRPDMAYFF--FTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCL 331
R F YGP D F L ++ + ++ G R F ++ D+V+G +
Sbjct: 284 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGD---GKQTRSFQFVSDLVEGLM 340
Query: 332 AALD 335
++
Sbjct: 341 RLME 344
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 62/265 (23%), Positives = 105/265 (39%)
Query: 178 VMHLAAQAG-VRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKV 236
+ HLA A V Y NP + +N+ G +++L + K + + S+S VYG +
Sbjct: 186 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 242
Query: 237 PFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 292
P E + P S Y K+ E + Y+ + + R F YGP D
Sbjct: 243 PQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGR 302
Query: 293 FFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQ 352
+ P+ D G R F ++ D+V+G + ++
Sbjct: 303 VVSNFVAQALRKEPLTVYGD-GKQTRSFQFVSDLVEGLMRLME--------------GEH 347
Query: 353 LRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQRELGYK 411
+ FNLGN + +L +++ + A NI P D P +I+ A+ LG++
Sbjct: 348 VGPFNLGNPGEFTMLELAKVVQETIDPNA--NIEFRPNTEDDPHKRKPDITKAKELLGWE 405
Query: 412 PTTDLQTGLKKFVRWYLSYYAGGKK 436
P L+ GL V+ + G +K
Sbjct: 406 PKVSLRQGLPLMVKDFRQRVFGDQK 430
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 163 (62.4 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 79/357 (22%), Positives = 139/357 (38%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGD--GVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
+V++TG GF+G++ + + +D + + +++ +V
Sbjct: 7 NVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKL--ILNSDTQNVAESVRNSPRYKLVLT 64
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI + A + +F+ V+H AA V +N+ + LE +
Sbjct: 65 DIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKI 124
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTD----QPASLYAATKKAGEEIAHTYNHIYGLSLT 274
V S+ VYG ++ + +E+ + + P + YAATK AGE Y Y L +
Sbjct: 125 KRFVHISTDEVYG-DSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLPIV 183
Query: 275 GLRFFTVYGP--WGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLA 332
R +YGP W + F + +I G R + ++DD G A
Sbjct: 184 TARMNNIYGPNQWDVKVVPRFIEIAKVRGEYTIQ-----GSGKQLRSWLFVDDASAGLKA 238
Query: 333 ALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNG 392
+ E + V +L T V DL L R + ++I P N
Sbjct: 239 VCEKGELHEIYNLGTYY--EKNVADLAKTIQEEV-DLQ--LGRAHEPPKYKSIPDRPYN- 292
Query: 393 DVPFTHANISLAQRELGYKPTTDLQTGLK----------KFVRWYLSYYAGGKKAAG 439
D+ + +I A+ +LG++PTT G++ K V+ +++ Y GGK G
Sbjct: 293 DLRYL-ISIEKAKNDLGWEPTTSFDDGMRHTVASALKEHKHVKMHVAIY-GGKGYVG 347
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 65/233 (27%), Positives = 115/233 (49%)
Query: 102 VLVTGAAGFVGT-HVSAALKRRG--DGVL-GLDNFNDYYDP-SLKKARQALLERSGIFIV 156
+LVTGAAGF+G+ +V L G D V+ LD +P +L R R
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYR----FE 60
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
GDI D A +++ + V+HLAA++ V ++ + + +V +N+ G +LL+ +
Sbjct: 61 RGDICD-APGRRV--MAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATR-H 116
Query: 217 PQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGL 276
+ V S+ VYG ++E D +P S Y+A+K +G+ +A ++ +GL +
Sbjct: 117 GVASFVQVSTDEVYGSLEHGSWTE-DEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVT 175
Query: 277 RFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKG 329
R YGP P+ F +++ +P++ G R++ ++DD V+G
Sbjct: 176 RCSNNYGPRQFPEKLIPRFITLLMDGHRVPLYGD---GLNVREWLHVDDHVRG 225
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 49/189 (25%), Positives = 85/189 (44%)
Query: 241 KDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDIL 300
+D +P S Y+A+K +G+ +A ++ +GL + R YGP P+ F ++
Sbjct: 140 EDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQFPEKLIPRFITLLM 199
Query: 301 NRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGN 360
+ +P++ G R++ ++DD V+G + A+ T RV+N+G
Sbjct: 200 DGHRVPLYGD---GLNVREWLHVDDHVRG-IEAVRTRGRAG------------RVYNIGG 243
Query: 361 TSPVPVSDLVSILERLLKVKAKRNIMKL--PRNGDVPFTHANISLAQRELGYKPTTDLQT 418
+ + +LV +L L A ++ R G + + QRELG+ P DL
Sbjct: 244 GATLSNKELVGLL--LEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDLAD 301
Query: 419 GLKKFVRWY 427
GL V WY
Sbjct: 302 GLAATVAWY 310
>UNIPROTKB|P14060 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006703 "estrogen biosynthetic process"
evidence=TAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0030868 "smooth endoplasmic
reticulum membrane" evidence=ISS] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic
process" evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic
process" evidence=TAS] [GO:0008202 "steroid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 EMBL:M27137
EMBL:M28392 EMBL:M28162 EMBL:M28391 EMBL:X53321 EMBL:M35493
EMBL:M63397 EMBL:M63395 EMBL:M63396 EMBL:M38180 EMBL:X55997
EMBL:S45679 EMBL:AK291556 EMBL:BC031999 IPI:IPI00843838 PIR:A36551
RefSeq:NP_000853.1 UniGene:Hs.364941 ProteinModelPortal:P14060
SMR:P14060 STRING:P14060 PhosphoSite:P14060 DMDM:112767
PRIDE:P14060 DNASU:3283 Ensembl:ENST00000369413
Ensembl:ENST00000528909 GeneID:3283 KEGG:hsa:3283 UCSC:uc001ehv.1
CTD:3283 GeneCards:GC01P120049 H-InvDB:HIX0028579 HGNC:HGNC:5217
MIM:109715 neXtProt:NX_P14060 PharmGKB:PA29486 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 InParanoid:P14060 KO:K00070
OrthoDB:EOG4K3KWG PhylomeDB:P14060 BioCyc:MetaCyc:HS08829-MONOMER
BRENDA:1.1.1.145 Reactome:REACT_15493 SABIO-RK:P14060
BindingDB:P14060 ChEMBL:CHEMBL1958 DrugBank:DB00157
DrugBank:DB01108 GenomeRNAi:3283 NextBio:13031 ArrayExpress:P14060
Bgee:P14060 CleanEx:HS_HSD3B1 Genevestigator:P14060
GermOnline:ENSG00000203857 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006703 GO:GO:0006704 GO:GO:0006705
GO:GO:0044281 Gene3D:3.40.50.720 Uniprot:P14060
Length = 373
Score = 145 (56.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 54/199 (27%), Positives = 92/199 (46%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA GF+G + L + + + + + + P L++ L ++ + ++EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 61
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D LK+ VS ++H A V + + + S ++ N+ G LLE C A+
Sbjct: 62 DILDEPFLKRACQDVSV--IIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 117
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 270
P ++ SS V G N+ + ++P + Y +KK E+ A+ +N G
Sbjct: 118 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 177
Query: 271 LSL--TGLRFFTVYGPWGR 287
+L LR +YG R
Sbjct: 178 GTLYTCALRPMYIYGEGSR 196
Score = 53 (23.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 368 DLVSILERLL---KVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFV 424
++VS L R + + R+I+ L N F++ AQR+L YKP + +K V
Sbjct: 299 EIVSFLLRPIYTYRPPFNRHIVTLS-NSVFTFSYKK---AQRDLAYKPLYSWEEAKQKTV 354
Query: 425 RW 426
W
Sbjct: 355 EW 356
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 60/216 (27%), Positives = 99/216 (45%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGD-GVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+ L+TG G VG+ ++ L D V+G+ + + D ++ + ++ I I D
Sbjct: 4 TALITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMD-NIYHLSDRINKKDRISIFYAD 62
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLE---VCKNAN 216
+ND + L+KLF+ + HLAAQ+ + + P + +NI G ++LE + K +
Sbjct: 63 LNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKD 122
Query: 217 P-QPAIVWASSSSVYGLNTKVPFS-EKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLT 274
P + SSS VYG KV +D T AS Y+ +K + + Y Y +
Sbjct: 123 GYDPVVHVCSSSEVYG-RAKVGIKLNEDTTFHGASPYSISKIGTDYLGRFYGEAYNIRTF 181
Query: 275 GLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFES 310
R T GP R D+ FF + K I + E+
Sbjct: 182 VTRMGTHSGP-RRSDV---FFESTVA--KQIALIET 211
>UNIPROTKB|Q5TDG2 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
UniGene:Hs.364941 HGNC:HGNC:5217 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GO:GO:0016853 EMBL:AL121995
IPI:IPI00246994 ProteinModelPortal:Q5TDG2 SMR:Q5TDG2 STRING:Q5TDG2
PRIDE:Q5TDG2 Ensembl:ENST00000235547 ArrayExpress:Q5TDG2
Bgee:Q5TDG2 Uniprot:Q5TDG2
Length = 375
Score = 145 (56.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 54/199 (27%), Positives = 92/199 (46%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA GF+G + L + + + + + + P L++ L ++ + ++EG
Sbjct: 5 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 63
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D LK+ VS ++H A V + + + S ++ N+ G LLE C A+
Sbjct: 64 DILDEPFLKRACQDVSV--IIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 119
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 270
P ++ SS V G N+ + ++P + Y +KK E+ A+ +N G
Sbjct: 120 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 179
Query: 271 LSL--TGLRFFTVYGPWGR 287
+L LR +YG R
Sbjct: 180 GTLYTCALRPMYIYGEGSR 198
Score = 53 (23.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 368 DLVSILERLL---KVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFV 424
++VS L R + + R+I+ L N F++ AQR+L YKP + +K V
Sbjct: 301 EIVSFLLRPIYTYRPPFNRHIVTLS-NSVFTFSYKK---AQRDLAYKPLYSWEEAKQKTV 356
Query: 425 RW 426
W
Sbjct: 357 EW 358
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 83/356 (23%), Positives = 146/356 (41%)
Query: 103 LVTGAAGFVGTH-VSAALKRRGD-GVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
L+TG AGF+G++ + A+ + D +D + Y +L + +E D+
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLS-YVSNYTTVFLSKVLNQPNFRFLEMDL 71
Query: 161 --NDMALLKKLF---DVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCK-- 213
N L + + ++ TH+++ AA++ V + +P + +NI +LLE +
Sbjct: 72 ATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRIL 131
Query: 214 -----NANPQPAIVWASSSSVYG-LNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNH 267
+ V S+ VYG + EK + + P S YAA+K A + I +Y +
Sbjct: 132 LGKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLN-PTSPYAASKAAVDLIIQSYRY 190
Query: 268 IYGLSLTGLRFFTVYGPWGRPDMAYFFFT---RDILNRKSIPIFESPD--HGTVA--RDF 320
Y +S+T +R VYGP + + +N+KS I + HG R +
Sbjct: 191 SYKISVTVIRANNVYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHKRKY 250
Query: 321 TYIDDIVKGC-LAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSI-----LE 374
+I D + L + Q +FN+G+ + LV L
Sbjct: 251 LHIYDFINAIDLVWMKQGSEVYHSTLESKMSGQ--IFNIGSDDEIDNLSLVKFICDYFLY 308
Query: 375 RLLKVKAKRNIMKLPRNGDVPFTHANISLAQ---RELGYKPTTDLQTGLKKFVRWY 427
R L +K + D + + SL + LG++P L+TGL+K + Y
Sbjct: 309 RKLSLKNLDYSKYITFVQDRNYNDSRYSLNYEKIKSLGWRPQIPLETGLRKLIDEY 364
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 155 (59.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/244 (23%), Positives = 109/244 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 89 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 143
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 144 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 195
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQ-----PASLYAATKKAGEEIAHTYNHIYGLSLTGL 276
+ AS+S VYG + +V +D P + Y K+ E + + Y G+ +
Sbjct: 196 LLASTSEVYG-DPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 254
Query: 277 RFFTVYGPWGRPDM----AYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLA 332
R F +G R M F L +++ ++ S G+ R F Y+ D+V G ++
Sbjct: 255 RIFNTFG--SRMHMNDGRVVSNFILQALQGEALTVYGS---GSQTRAFQYVSDLVNGLVS 309
Query: 333 ALDT 336
+++
Sbjct: 310 LMNS 313
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 59/262 (22%), Positives = 108/262 (41%)
Query: 173 VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGL 232
+ + HLA+ A M NP + +N G +++L + K + ++ AS+S VYG
Sbjct: 149 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYG- 205
Query: 233 NTKVPFSEKDRTDQ-----PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGR 287
+ +V +D P + Y K+ E + + Y G+ + R F +G R
Sbjct: 206 DPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFG--SR 263
Query: 288 PDMAYFFFTRD-ILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXX 346
M + IL G+ R F Y+ D+V G ++ +++
Sbjct: 264 MHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPV---- 319
Query: 347 XXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHA-NISLAQ 405
NLGN + + +++ L V ++ +I LP D P +I A+
Sbjct: 320 ----------NLGNPEEHTILEFAQLIKSL--VASRSHIQFLPEAQDDPQRRRPDIRKAK 367
Query: 406 RELGYKPTTDLQTGLKKFVRWY 427
LG++P L+ GL K ++++
Sbjct: 368 LLLGWEPVVPLEEGLNKTIQYF 389
>UNIPROTKB|Q5QP01 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AL359553 UniGene:Hs.654399 HGNC:HGNC:5218 GO:GO:0016853
IPI:IPI00642070 SMR:Q5QP01 STRING:Q5QP01 Ensembl:ENST00000433745
Uniprot:Q5QP01
Length = 195
Score = 140 (54.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 55/198 (27%), Positives = 90/198 (45%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA G +G + L + + + + + P L++ L R+ + ++EG
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D LK+ VS V+H A V + + + S ++ N+ G LLE C A+
Sbjct: 61 DILDEPFLKRACQDVSV--VIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 270
P ++ SS V G N+ + ++P + Y +KK E+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 271 LSL--TGLRFFTVYGPWG 286
+L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 151 (58.2 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 57/183 (31%), Positives = 86/183 (46%)
Query: 104 VTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+TG G G++++ L R+ V G+ +FN + + + E + +F+ GD
Sbjct: 7 ITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHK--ENARLFLHYGD 64
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIA-GLVSLLEVCKNANPQ 218
I D +L KL + V +LAAQ+ VR + P Y I G +++LE KNA+
Sbjct: 65 ITDGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIP-VYTMETIGLGTLNILEAIKNADNA 123
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL-SLTG 275
I + ASSS +YG VP +E + P S YA K Y YGL + TG
Sbjct: 124 KEIRFYQASSSEMYGDVKSVPQTESTPFN-PRSPYACAKVFAHYQTINYRESYGLHASTG 182
Query: 276 LRF 278
+ F
Sbjct: 183 ILF 185
>UNIPROTKB|P26439 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IDA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IDA] [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005758
"mitochondrial intermembrane space" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=NAS] [GO:0005783 "endoplasmic
reticulum" evidence=NAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic process"
evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic process"
evidence=TAS] [GO:0008202 "steroid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451
HOVERGEN:HBG000014 KO:K00070 BRENDA:1.1.1.145 Reactome:REACT_15493
DrugBank:DB00157 DrugBank:DB01108 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006704 GO:GO:0006705 GO:GO:0044281
Gene3D:3.40.50.720 OMA:WVFPRIA EMBL:M77144 EMBL:M67466
EMBL:CR627415 EMBL:AK222997 EMBL:AL359553 EMBL:CH471122
EMBL:BC038419 EMBL:BC131488 EMBL:S80140 EMBL:S60309 EMBL:S60310
IPI:IPI00218494 IPI:IPI00465001 PIR:A39488 RefSeq:NP_000189.1
RefSeq:NP_001159592.1 UniGene:Hs.654399 ProteinModelPortal:P26439
SMR:P26439 STRING:P26439 PhosphoSite:P26439 DMDM:112770
PRIDE:P26439 DNASU:3284 Ensembl:ENST00000369416
Ensembl:ENST00000543831 GeneID:3284 KEGG:hsa:3284 UCSC:uc001ehs.3
UCSC:uc001ehu.3 CTD:3284 GeneCards:GC01P119957 HGNC:HGNC:5218
MIM:201810 MIM:613890 neXtProt:NX_P26439 Orphanet:90791
Orphanet:1331 Orphanet:3185 PharmGKB:PA29487 InParanoid:P26439
PhylomeDB:P26439 BioCyc:MetaCyc:HS10943-MONOMER BindingDB:P26439
ChEMBL:CHEMBL3670 GenomeRNAi:3284 NextBio:13035 ArrayExpress:P26439
Bgee:P26439 CleanEx:HS_HSD3B2 Genevestigator:P26439
GermOnline:ENSG00000203859 Uniprot:P26439
Length = 372
Score = 140 (54.3 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 55/198 (27%), Positives = 90/198 (45%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA G +G + L + + + + + P L++ L R+ + ++EG
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D LK+ VS V+H A V + + + S ++ N+ G LLE C A+
Sbjct: 61 DILDEPFLKRACQDVSV--VIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 270
P ++ SS V G N+ + ++P + Y +KK E+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 271 LSL--TGLRFFTVYGPWG 286
+L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
Score = 52 (23.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+L YKP + +K V W
Sbjct: 333 AQRDLAYKPLYSWEEAKQKTVEW 355
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 149 (57.5 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 53/166 (31%), Positives = 85/166 (51%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
L+TG GF G +V+ L+R G + G + S R+A G F V DI D
Sbjct: 11 LITGLEGFTGRYVADELRRSGYEIFGTRH-------SGADEREA-----GCFRV--DICD 56
Query: 163 MALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP-AI 221
+A L+++ + V V+HLAA + V + ++ +N+ G +LLE + P A+
Sbjct: 57 LAALRRVVEEVEPEVVVHLAAISFVAHG--EADAIYRANVVGTRNLLEALAGLSRTPRAV 114
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNH 267
+ ASS++VYG N V ++ + PA+ YA +K A E +A + H
Sbjct: 115 LLASSANVYG-NAPVELIDESVSLAPANDYAVSKLAMEYMARLWMH 159
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 145 (56.1 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 60/232 (25%), Positives = 100/232 (43%)
Query: 102 VLVTGAAGFVGTHVSAALKRRG-DGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
++VTG AGF+G+++ AL +G +L +DN D K L + E +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD----GTKFVNLVDLNIADYMDKEDFL 57
Query: 161 NDMALLKKLFDVVSFTH--VMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
+ ++ DV + H + +Y M N +Y +S LL C +
Sbjct: 58 IQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDN--NYQYSK-----ELLHYCLER--E 108
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRF 278
++ASS++ YG T F E ++P ++Y +K +E + G R+
Sbjct: 109 IPFLYASSAATYGGRTS-DFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRY 167
Query: 279 FTVYGPW-G-RPDMAY--FFFTRDILNRKSIPIFESPDHGTVARDFTYIDDI 326
F VYGP G + MA F + N +S +FE ++ RDF Y+ D+
Sbjct: 168 FNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN--FKRDFVYVGDV 217
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 62/192 (32%), Positives = 93/192 (48%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFND------YYDPSLKKARQALLERSG 152
LVTG G G++++ L +G V GL NFN Y DP +AL++
Sbjct: 20 LVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPH--NVNKALMK--- 74
Query: 153 IFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIA-GLVSLLEV 211
+ GD++D + L++ DV+ V +LAAQ+ V + + P+ Y +A G + LLE
Sbjct: 75 --LHYGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEA 131
Query: 212 CKNANPQP--AIVW--ASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNH 267
++ N AI + A SS ++G +T P SE P S YAA+K A Y
Sbjct: 132 VRSHNIDNGRAIKYYQAGSSEMFG-STPPPQSETTPF-HPRSPYAASKCAAHWYTVNYRE 189
Query: 268 IYGL-SLTGLRF 278
YGL + G+ F
Sbjct: 190 AYGLYACNGILF 201
>MGI|MGI:96233 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96233 GO:GO:0016021 GO:GO:0005739
CTD:3283 eggNOG:COG0451 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 EMBL:M58567
EMBL:BC052659 IPI:IPI00229070 PIR:I49762 RefSeq:NP_032319.1
UniGene:Mm.140811 ProteinModelPortal:P24815 SMR:P24815
STRING:P24815 PhosphoSite:P24815 PaxDb:P24815 PRIDE:P24815
Ensembl:ENSMUST00000107016 GeneID:15492 KEGG:mmu:15492
InParanoid:P24815 OMA:MAGWSCL SABIO-RK:P24815 NextBio:288366
Bgee:P24815 Genevestigator:P24815 GermOnline:ENSMUSG00000027871
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 Uniprot:P24815
Length = 373
Score = 135 (52.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 50/169 (29%), Positives = 80/169 (47%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGD--GVLGLDNFNDYYDPSLKKARQALLERSGIFIV 156
G S LVTGA GFVG + L + + V LD + P K+ L ++ + ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIKMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKTKVTVL 59
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
EGDI D L++ +S V+H AA V + + + N+ G +LLE C A+
Sbjct: 60 EGDILDAQCLRRACQGISV--VIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACVQAS 116
Query: 217 PQPAIVWASSSSVYGLNT--KVPFS---EKDRTDQPASLYAATKKAGEE 260
PA ++ SS V G N+ K+ + E++ + Y +KK E+
Sbjct: 117 V-PAFIFCSSVDVAGPNSYKKIVLNGHEEQNHESTWSDPYPYSKKMAEK 164
Score = 51 (23.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGY+P + + +K W
Sbjct: 334 AQRDLGYEPLVNWEEAKQKTSEW 356
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 127 (49.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 73/299 (24%), Positives = 119/299 (39%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
SVLV G GF+G+H+ L LD++ S R R G+ + DI
Sbjct: 12 SVLVVGGCGFLGSHIVRML---------LDDYK-CSAVSAVDLRCTRNRREGVQYHDADI 61
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
+ L +FD V V+H A+ ++ + + + N+ G +++E CK A + A
Sbjct: 62 TNAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKKAGVK-A 120
Query: 221 IVWASSSSVYGLNTK--VPFSEK---DRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTG 275
+V+ SS+SV N + E+ R D+ Y+ TK EEI N L
Sbjct: 121 LVFTSSASVISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKANEPGKLLTAA 180
Query: 276 LRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
+R ++G A T R+ + D+ + DFTY ++ L A
Sbjct: 181 IRPSGIFGEGDSMVTANLVKTY----REGKWKVQVGDNNNLF-DFTYAGNVAHAHLLAAR 235
Query: 336 TAEXXXXXXXXXXXXAQL--RVFNLGNTSPVPVSDLVSILERLLKVKAKRN-IMKLPRN 391
++ VF + N SPV D ++ R +A + + LPR+
Sbjct: 236 ALLVTYSAKTQPLDHERVDGEVFLITNDSPVYFWDFARLVYRAAGNQAGLDKVWVLPRD 294
Score = 58 (25.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 400 NISLAQRELGYKPTTDLQTGLKKFVRWYL 428
NI+ A++ LGY P ++ G+++ V++ L
Sbjct: 332 NITKAKQRLGYAPIVSMEEGVRRGVQYIL 360
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 126 (49.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 62/238 (26%), Positives = 92/238 (38%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
VLVTG AGFVG ++ L RG V D PSL A L E +++GDI
Sbjct: 17 VLVTGGAGFVGANLVTTLLDRGHWVRSFDRA-----PSLLPAHPQL-E-----VLQGDIT 65
Query: 162 DMALLKKLFDVVSFTHVMHLAA----QAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
D + D + + H AA G + N+ G +LL + A
Sbjct: 66 DADVCAAAVDGIDT--IFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGV 123
Query: 218 QPAIVWASSSSVY--GLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTG 275
Q V+ SS+SV G N TD+ LY TK E N + G+
Sbjct: 124 Q-RFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCA 182
Query: 276 LRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAA 333
+R G WG D F + + + + + + D +Y+ +++ G + A
Sbjct: 183 IR---PSGIWGNGDQTMFRKLFESVLKGHVKVLVGRKSARL--DNSYVHNLIHGFILA 235
Score = 59 (25.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 400 NISLAQRELGYKPTTDLQTGLKKFVRWYLSYYAGGKKAA 438
+I+ A+R+LGY+P Q L + + +Y+S + K A
Sbjct: 321 SIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEA 359
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 100 (40.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 37/121 (30%), Positives = 56/121 (46%)
Query: 308 FESPDHGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVS 367
+E+ D GT RDF ++ D+ +G +AALD A R FNLG V
Sbjct: 311 WETED-GTAVRDFIHVTDLARGHIAALDAANERKLAE-------NFRAFNLGTGRGHSVK 362
Query: 368 DLVSILERLLKVKAKRNIMKLPRN-GDVPFTHANISLAQRELGYKPT---TDLQTGLKKF 423
++V +E + + + + PR GDV A + +Q+EL +K TD L KF
Sbjct: 363 EVVDAMESVSRKQIP--VRAAPRRPGDVGSCVAVATRSQQELRWKTEKSLTDACGSLCKF 420
Query: 424 V 424
+
Sbjct: 421 L 421
Score = 86 (35.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 149 ERSGIFIVEGDINDMALLKKLFD---VVS--------FTHVMHLAAQAGVRYAMQNPNSY 197
E + + D D A L++L D V S + V+H AA V +++NP Y
Sbjct: 104 EMPALHLAAHDYRDTAALRQLLDQYQVDSRWGTPKSKISGVIHFAAYKAVEESIKNPLKY 163
Query: 198 VHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYG-LNTK-VPFSE-----KDRTDQPASL 250
+N++GL+ + +++SS++VYG L T +P E KD A
Sbjct: 164 YANNVSGLIDFASTLGKYGIK-TFIFSSSATVYGTLATSGLPLKEELCAHKDEIYHDADG 222
Query: 251 YAATKKAGEE-IAHTY 265
A T +AG I + Y
Sbjct: 223 VAQTIRAGSTGITNPY 238
Score = 78 (32.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDN----FNDYYDPSLKKARQALLERS----GI 153
+LVTG GF+G+H + L + V+ +DN F +D A++ ER +
Sbjct: 49 ILVTGGLGFIGSHTTLELLKASYNVVVIDNLSNSFQSVFDRIKHLAQKHHDERGTEMPAL 108
Query: 154 FIVEGDINDMALLKKLFD 171
+ D D A L++L D
Sbjct: 109 HLAAHDYRDTAALRQLLD 126
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 52/184 (28%), Positives = 80/184 (43%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG +G G++++ L +G V G+ +FN L S + G
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEV---CKNA 215
D+ D + L KL + T V HLAAQ+ V+ + P + G + LL+ C+
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR-L 172
Query: 216 NPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
+ AS+S +YG ++P SEK P S YA K G I Y Y + +
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEKTPF-YPRSPYAVAKMYGYWIVVNYREAYNMFACN 231
Query: 275 GLRF 278
G+ F
Sbjct: 232 GILF 235
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 52/184 (28%), Positives = 80/184 (43%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG +G G++++ L +G V G+ +FN L S + G
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEV---CKNA 215
D+ D + L KL + T V HLAAQ+ V+ + P + G + LL+ C+
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR-L 172
Query: 216 NPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
+ AS+S +YG ++P SEK P S YA K G I Y Y + +
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEKTPF-YPRSPYAVAKMYGYWIVVNYREAYNMFACN 231
Query: 275 GLRF 278
G+ F
Sbjct: 232 GILF 235
>RGD|1308676 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISO;IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISO;IDA] [GO:0005496 "steroid binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006082 "organic
acid metabolic process" evidence=IEP] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISO] [GO:0006701 "progesterone
biosynthetic process" evidence=IEP;IDA] [GO:0006703 "estrogen
biosynthetic process" evidence=IEP] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0008207 "C21-steroid hormone metabolic
process" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEP] [GO:0008585 "female gonad development" evidence=IEP]
[GO:0009635 "response to herbicide" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0010038 "response
to metal ion" evidence=IEP] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0010288 "response to lead ion" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0014823 "response to activity" evidence=IEP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016101 "diterpenoid
metabolic process" evidence=IEP] [GO:0017143 "insecticide metabolic
process" evidence=IEP] [GO:0018879 "biphenyl metabolic process"
evidence=IEP] [GO:0018894 "dibenzo-p-dioxin metabolic process"
evidence=IEP] [GO:0018958 "phenol-containing compound metabolic
process" evidence=IEP] [GO:0018970 "toluene metabolic process"
evidence=IEP] [GO:0021766 "hippocampus development" evidence=IEP]
[GO:0030061 "mitochondrial crista" evidence=IDA] [GO:0030325
"adrenal gland development" evidence=IEP] [GO:0030728 "ovulation"
evidence=IEP] [GO:0030851 "granulocyte differentiation"
evidence=IEP] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0033197 "response to vitamin E" evidence=IEP]
[GO:0033327 "Leydig cell differentiation" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0035410
"dihydrotestosterone 17-beta-dehydrogenase activity" evidence=IDA]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0045471 "response to ethanol" evidence=IEP]
[GO:0046470 "phosphatidylcholine metabolic process" evidence=IEP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0050756 "fractalkine metabolic process" evidence=IEP]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] [GO:0051592 "response to
calcium ion" evidence=IEP] [GO:0060135 "maternal process involved
in female pregnancy" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0061370 "testosterone biosynthetic
process" evidence=IEP] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IEP] [GO:0070542 "response to fatty acid"
evidence=IEP] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071288 "cellular response to mercury ion"
evidence=IEP] [GO:0071320 "cellular response to cAMP" evidence=IEP]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0071371 "cellular response to gonadotropin stimulus"
evidence=IEP] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEP] [GO:0071373
"cellular response to luteinizing hormone stimulus" evidence=IEP]
[GO:0071406 "cellular response to methylmercury" evidence=IEP]
[GO:0071549 "cellular response to dexamethasone stimulus"
evidence=IEP] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEP] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:1308676 GO:GO:0016021
GO:GO:0046686 GO:GO:0021766 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0004769 GO:GO:0006703 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:M38178 EMBL:BC086578 EMBL:DQ515797 IPI:IPI00362470 PIR:A39051
RefSeq:NP_001007720.3 UniGene:Rn.128814 ProteinModelPortal:P22071
STRING:P22071 Ensembl:ENSRNOT00000026325 GeneID:360348
KEGG:rno:360348 UCSC:RGD:1308676 InParanoid:P22071 OMA:WVFPRIA
BRENDA:5.3.3.1 NextBio:672781 ArrayExpress:P22071
Genevestigator:P22071 GermOnline:ENSRNOG00000019454 GO:GO:0030061
GO:GO:0035410 GO:GO:0051287 GO:GO:0005496 GO:GO:0030325
GO:GO:0018879 GO:GO:0071236 GO:GO:0071320 GO:GO:0071549
GO:GO:0044344 GO:GO:0071372 GO:GO:0071333 GO:GO:0070301
GO:GO:0032869 GO:GO:0071373 GO:GO:0071288 GO:GO:0071406
GO:GO:0071560 GO:GO:0018894 GO:GO:0016101 GO:GO:0008585
GO:GO:0050756 GO:GO:0030851 GO:GO:0017143 GO:GO:0033327
GO:GO:0060135 GO:GO:0006082 GO:GO:0030728 GO:GO:0018958
GO:GO:0046470 GO:GO:0006701 GO:GO:0014823 GO:GO:0043279
GO:GO:0046685 GO:GO:0051592 GO:GO:0051412 GO:GO:0042493
GO:GO:0032355 GO:GO:0045471 GO:GO:0070542 GO:GO:0060992
GO:GO:0009635 GO:GO:0033591 GO:GO:0010288 GO:GO:0010226
GO:GO:0033197 GO:GO:0061370 GO:GO:0018970 Uniprot:P22071
Length = 373
Score = 133 (51.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/138 (30%), Positives = 68/138 (49%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGD--GVLGLDNFNDYYDPSLKKARQALLERSGIFIV 156
G S LVTGA GFVG + L + + V LD + P K+ L ++ + ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
EGDI D L++ +S V+H AA V + + + + N+ G ++LE C A+
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTAAVIDVSHVLPR-QTILDVNLKGTQNILEACVEAS 116
Query: 217 PQPAIVWASSSSVYGLNT 234
PA ++ S+ V G N+
Sbjct: 117 V-PAFIYCSTVDVAGPNS 133
Score = 47 (21.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGY P + +K W
Sbjct: 334 AQRDLGYVPLVSWEEAKQKTSEW 356
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 133 (51.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 57/290 (19%), Positives = 115/290 (39%)
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYA-MQNPNSYVHSNIAGLVSLLEVCKNANP 217
D+ + F+ + THV+HLAA+ G ++ M+ + NI ++L CK N
Sbjct: 46 DLKSRESTRSYFEKIKPTHVIHLAARVGGLFSNMKYKVEFFRENIDINDNVLACCKEFNV 105
Query: 218 QPAIVWASSSSVYGLNTKVPFSEK---DRTDQPASL-YAATKKAGEEIAHTYNHIYGLSL 273
+ S+ ++ T P E + P++ YA K+ + + YN YG
Sbjct: 106 VKCVS-CLSTCIFPDKTTYPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKF 164
Query: 274 TGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPD-----HGTVARDFTYIDDIVK 328
T + +YGP + ++++ + + + D G R F Y D+ K
Sbjct: 165 TSVIPTNIYGPHDNYHLTDGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDLAK 224
Query: 329 GCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKL 388
+ L+ E + ++G + ++D+ ++ ++ K K
Sbjct: 225 YFVWTLNNYEEMSPL-----------ILSVGEEDEISIADVARLITEAMEFKGKLIFDTS 273
Query: 389 PRNGDVPFTHANISLAQR--ELGYKPTTDLQTGLKKFVRWYLSYYAGGKK 436
+G T +N+ L +L + P +Q +K+ +W++ Y +K
Sbjct: 274 KADGQYKKTASNLKLKSLVPDLTFTP---IQQAIKESCQWFIDNYETARK 320
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 101 SVLVTGAAGFVGTHVSAALK 120
+VLVTG +G VG + +K
Sbjct: 9 TVLVTGGSGLVGKGIEKYVK 28
>MGI|MGI:109598 [details] [associations]
symbol:Hsd3b6 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 6" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006700 "C21-steroid
hormone biosynthetic process" evidence=ISO] [GO:0006702 "androgen
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0034757 "negative regulation of iron ion transport"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:109598 GO:GO:0016021
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 EMBL:AL606755 GeneTree:ENSGT00550000074557 CTD:15497
EMBL:AF031170 EMBL:AK142267 EMBL:CH466620 IPI:IPI00420666
RefSeq:NP_038849.2 UniGene:Mm.14435 ProteinModelPortal:O35469
SMR:O35469 STRING:O35469 PRIDE:O35469 Ensembl:ENSMUST00000029463
Ensembl:ENSMUST00000170847 GeneID:15497 KEGG:mmu:15497
InParanoid:Q3UQN7 OMA:FIHISST NextBio:288386 Bgee:O35469
Genevestigator:O35469 GermOnline:ENSMUSG00000027869 Uniprot:O35469
Length = 373
Score = 127 (49.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 44/138 (31%), Positives = 67/138 (48%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGD--GVLGLDNFNDYYDPSLKKARQALLERSGIFIV 156
G S LVTGA GF+G + L + D + LD F + P ++ L + ++
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLMQEKDLEEIRVLDKF---FRPETREQFFNLDTNIKVTVL 59
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
EGDI D L+K +S V+H AA V + + + N+ G +LLE C A+
Sbjct: 60 EGDILDTQYLRKACQGISV--VIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACIQAS 116
Query: 217 PQPAIVWASSSSVYGLNT 234
PA +++SS V G N+
Sbjct: 117 V-PAFIFSSSVDVAGPNS 133
Score = 52 (23.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 366 VSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVR 425
VS L+S + R + R+++ L G FT + AQR+LGY+P + +K
Sbjct: 301 VSFLLSPIYRFIP-PFNRHLVTL--TGST-FTFS-YKKAQRDLGYEPLVSWEEAKQKTSE 355
Query: 426 W 426
W
Sbjct: 356 W 356
>TIGR_CMR|CPS_2156 [details] [associations]
symbol:CPS_2156 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0016853 EMBL:CP000083 GenomeReviews:CP000083_GR OMA:KAYFLSN
RefSeq:YP_268881.1 ProteinModelPortal:Q482Y6 STRING:Q482Y6
GeneID:3521240 KEGG:cps:CPS_2156 PATRIC:21467431
ProtClustDB:CLSK906403 BioCyc:CPSY167879:GI48-2226-MONOMER
Uniprot:Q482Y6
Length = 400
Score = 124 (48.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 46/162 (28%), Positives = 75/162 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
V VTGA GF+GT + L+ V G +Y P L + G+ +V+GDI
Sbjct: 47 VFVTGAGGFLGTAICRLLRLANIKVTGFAR--GHY-PELSQM--------GVNMVQGDIT 95
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
D ALLK+ S V H+AA+AGV + + Y N+ G ++++ C+ +
Sbjct: 96 DFALLKETMH--SCDLVFHVAAKAGV---WGSKDDYFKPNVQGAKNIIQACQEL-AITRL 149
Query: 222 VWASSSSVY--GLNTKVPFSEKDRTDQPASLYAATKKAGEEI 261
V+ S+ SV G++ + D + Y +K E++
Sbjct: 150 VYTSTPSVTFAGVDEAGIDESQPYADNFLNFYGESKALAEQL 191
Score = 55 (24.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 400 NISLAQRELGYKPTTDLQTGLKK 422
+IS A+++LGY P ++ G+K+
Sbjct: 369 DISAAKKDLGYTPLISIEEGMKQ 391
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 131 (51.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 52/188 (27%), Positives = 81/188 (43%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFND------YYDPSLKKARQALLERSG 152
L+TG +G G++++ L +G V G+ +FN Y DP R
Sbjct: 5 LITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVR-------- 56
Query: 153 IFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVC 212
+F+ GD+ND + + ++ V + +L AQ+ VR + P + G V LLE
Sbjct: 57 LFLHYGDLNDASSINRVLREVRPDEIYNLGAQSHVRVSFDVPEYTGEIDALGTVRLLEGI 116
Query: 213 KNANPQPAIVWASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL 271
+ ASSS +YG + P +K+ T P S YA K I Y YG+
Sbjct: 117 RETGLNTRFYQASSSELYGKVVETP--QKETTPFYPRSPYACAKAYAYYITVNYRESYGM 174
Query: 272 -SLTGLRF 278
+ G+ F
Sbjct: 175 YACNGILF 182
Score = 44 (20.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 390 RNGDVPFTHANISLAQRELGYKPTTDLQTGL 420
R +V + + A+R+LG++P D Q GL
Sbjct: 300 RPAEVDLLLGDPAKARRQLGWQPRVDFQ-GL 329
>MGI|MGI:96234 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96234 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 CTD:3284 EMBL:AL606755 EMBL:BC026757 EMBL:BC040397
EMBL:M75886 IPI:IPI00230105 RefSeq:NP_694873.2 UniGene:Mm.482364
ProteinModelPortal:P26149 SMR:P26149 STRING:P26149
PhosphoSite:P26149 PaxDb:P26149 PRIDE:P26149
Ensembl:ENSMUST00000107021 Ensembl:ENSMUST00000107022
Ensembl:ENSMUST00000177651 GeneID:15493 KEGG:mmu:15493
GeneTree:ENSGT00550000074557 InParanoid:B1ARN7 OMA:HEEECHE
NextBio:288370 Bgee:P26149 Genevestigator:P26149
GermOnline:ENSMUSG00000063730 Uniprot:P26149
Length = 373
Score = 121 (47.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 41/136 (30%), Positives = 66/136 (48%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA GF+G + L + D + + + + P +K L + ++EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIQLLVQEED-LEEIRVLDKVFRPETRKEFFNLETSIKVTVLEG 61
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D L++ +S V+H AA V + + + N+ G +LLE C A+
Sbjct: 62 DILDTQYLRRACQGISV--VIHTAAIIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 219 PAIVWASSSSVYGLNT 234
PA +++SS V G N+
Sbjct: 118 PAFIFSSSVDVAGPNS 133
Score = 52 (23.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 366 VSDLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVR 425
VS L+S + R + R+++ L +G FT + AQR+LGY+P + +K
Sbjct: 301 VSFLLSPIYRYIP-PFNRHLVTL--SGST-FTFS-YKKAQRDLGYEPLVSWEEAKQKTSE 355
Query: 426 W 426
W
Sbjct: 356 W 356
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 118 (46.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 43/165 (26%), Positives = 66/165 (40%)
Query: 178 VMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYG--LNTK 235
V+HLA Q V A ++P + N+ G ++LL+ K ++ SS VYG
Sbjct: 57 VIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDVYGQVAEAA 116
Query: 236 VPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFF 295
+P E + P + YA +K A E + + G + R F GP +
Sbjct: 117 LPIHE-ELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGPGQKDSFVIASA 175
Query: 296 TRDILNRKSIPIFESPDHGT--VARDFTYIDDIVKGCLAALDTAE 338
R I K + G V+RDF + D++ L L E
Sbjct: 176 ARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLLSHGE 220
Score = 52 (23.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 102 VLVTGAAGFVGTHVSAAL 119
+ VTG +GFVG H+ A L
Sbjct: 5 LFVTGLSGFVGKHLQAYL 22
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 54/188 (28%), Positives = 84/188 (44%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGL----DNFN-DYYDPSLKKARQALLERSGIFIV 156
VL+TG G G+++S L +G V G+ FN D D LE + +
Sbjct: 7 VLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHD--LEAK-LRLH 63
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
GD+ D L+++ + V T + +L AQ+ VR + +P V S G + LLE ++
Sbjct: 64 YGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAIRDYQ 123
Query: 217 PQPAI----VWASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL 271
+ I A SS ++G ++P +K+ T P S YA K G Y Y L
Sbjct: 124 HRTGIQVRFYQAGSSEMFGKVQEIP--QKETTPFYPRSPYACAKVYGHWQTVNYRESYDL 181
Query: 272 -SLTGLRF 278
+ G+ F
Sbjct: 182 FACNGILF 189
>UNIPROTKB|Q5IFP1 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9615 "Canis lupus familiaris" [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
CTD:3284 EMBL:AY739720 RefSeq:NP_001010954.1 UniGene:Cfa.13172
ProteinModelPortal:Q5IFP1 STRING:Q5IFP1 GeneID:483146
KEGG:cfa:483146 InParanoid:Q5IFP1 NextBio:20857590 Uniprot:Q5IFP1
Length = 373
Score = 118 (46.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA GF+G + L + + + + + P L + L ++ + +VEG
Sbjct: 3 GWSCLVTGAGGFLGQRIVHLLAEEKE-LQEIRALDKAFRPELLEEFSKLQSKTKLTMVEG 61
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D LK+ S V+H A+ V + + ++ N+ G LLE C A+
Sbjct: 62 DILDEQCLKRACQGTSV--VIHTASVIDVMNVIHR-ETIMNVNLKGTQLLLEACAQASV- 117
Query: 219 PAIVWASSSSVYGLNT 234
P ++ S+ V G N+
Sbjct: 118 PIFIYTSTIEVAGPNS 133
Score = 54 (24.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGYKP + +K W
Sbjct: 334 AQRDLGYKPLFSWEEAKQKTTEW 356
>RGD|67377 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 1" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA]
[GO:0004769 "steroid delta-isomerase activity" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006700
"C21-steroid hormone biosynthetic process" evidence=IDA] [GO:0006702
"androgen biosynthetic process" evidence=IDA] [GO:0010288 "response
to lead ion" evidence=IEP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=TAS]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030283
"testosterone dehydrogenase [NAD(P)] activity" evidence=TAS]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEP] [GO:0034698 "response to
gonadotropin stimulus" evidence=IEP] [GO:0034757 "negative
regulation of iron ion transport" evidence=IMP] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:67377
GO:GO:0016021 GO:GO:0046686 GO:GO:0021766 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 GO:GO:0006702
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0033327 GO:GO:0051412 GO:GO:0010288
GeneTree:ENSGT00550000074557 EMBL:L17138 EMBL:BC089937
IPI:IPI00555268 PIR:A48769 RefSeq:NP_058961.4 RefSeq:XP_003749409.1
UniGene:Rn.109394 ProteinModelPortal:Q62878 STRING:Q62878
Ensembl:ENSRNOT00000026306 GeneID:100911154 GeneID:29632
KEGG:rno:100911154 KEGG:rno:29632 UCSC:RGD:67377 CTD:15497
InParanoid:Q62878 NextBio:609864 Genevestigator:Q62878
GermOnline:ENSRNOG00000019441 GO:GO:0030283 GO:GO:0006700
GO:GO:0034757 GO:GO:0034698 Uniprot:Q62878
Length = 373
Score = 118 (46.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 47/168 (27%), Positives = 80/168 (47%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA GF+G + L + D + + + + P ++ L + ++EG
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLVQEKD-LKEVRVLDKVFRPETREEFFNLGTSIKVTVLEG 61
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHS-NIAGLVSLLEVCKNANP 217
DI D L++ +S V+H AA V NP + N+ G +LLE C A+
Sbjct: 62 DILDTQCLRRACQGISV--VIHTAALIDVTGV--NPRQTILDVNLKGTQNLLEACVQASV 117
Query: 218 QPAIVWASSSSVYGLNT--KVPFS--EKDRTDQP-ASLYAATKKAGEE 260
PA ++ S+ V G N+ K+ + E++ + ++ Y +KK E+
Sbjct: 118 -PAFIYCSTVDVAGPNSYKKIILNGHEEEHHESTWSNPYPYSKKMAEK 164
Score = 54 (24.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGYKP + +K W
Sbjct: 334 AQRDLGYKPLVSWEEAKQKTSEW 356
>UNIPROTKB|F1PED8 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:AAEX03011027 Ensembl:ENSCAFT00000015969 Uniprot:F1PED8
Length = 377
Score = 118 (46.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA GF+G + L + + + + + P L + L ++ + +VEG
Sbjct: 7 GWSCLVTGAGGFLGQRIVHLLAEEKE-LQEIRALDKAFRPELLEEFSKLQSKTKLTMVEG 65
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D LK+ S V+H A+ V + + ++ N+ G LLE C A+
Sbjct: 66 DILDEQCLKRACQGTSV--VIHTASVIDVMNVIHR-ETIMNVNLKGTQLLLEACAQASV- 121
Query: 219 PAIVWASSSSVYGLNT 234
P ++ S+ V G N+
Sbjct: 122 PIFIYTSTIEVAGPNS 137
Score = 54 (24.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGYKP + +K W
Sbjct: 338 AQRDLGYKPLFSWEEAKQKTTEW 360
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 125 (49.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K QA +E + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + G + LL+ K
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 275 GLRF 278
G+ F
Sbjct: 204 GILF 207
Score = 46 (21.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 386 MKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVR 425
+K R +V F + S AQ++L +KP +++ V+
Sbjct: 321 LKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQ 360
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 125 (49.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K QA +E + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + G + LL+ K
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 275 GLRF 278
G+ F
Sbjct: 204 GILF 207
Score = 46 (21.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 386 MKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVR 425
+K R +V F + S AQ++L +KP +++ V+
Sbjct: 321 LKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQ 360
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 125 (49.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K QA +E + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + G + LL+ K
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 275 GLRF 278
G+ F
Sbjct: 204 GILF 207
Score = 46 (21.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 386 MKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVR 425
+K R +V F + S AQ++L +KP +++ V+
Sbjct: 321 LKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQ 360
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 79/344 (22%), Positives = 140/344 (40%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGD 159
+ +LVTG+ G++G + L RRG V L +++ + + GD
Sbjct: 13 MKILVTGSTGYLGARLCHVLLRRGHSVRAL----------VRRTSDLSDLPPEVELAYGD 62
Query: 160 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQP 219
+ D + L D S ++ AA A V + +P+ ++ N+ GL ++LE K
Sbjct: 63 VTDY---RSLTDACSGCDIVFHAA-ALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQ 118
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTDQP--ASLYAATKKAGEEIAHTYNHIYGLSLTGLR 277
I++ SS G +E ++ + Y +K +++A G+ + L
Sbjct: 119 KIIYTSSFFALGSTDGSVANENQVHNERFFCTEYERSKAVADKMALNAAS-EGVPIILLY 177
Query: 278 FFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALDTA 337
++GP G+ A R ++ R + + GT F+++DD+V+G +AA++
Sbjct: 178 PGVIFGP-GKLTSANMV-ARMLIERFNGRLPGYIGSGTDRYSFSHVDDVVEGHVAAMEKG 235
Query: 338 EXXXXXXXXXXXXAQLRVFNL-----GNTSPVPVSDLVSI-LERLLKVKAKRNIMKLPRN 391
+ VF++ G P L +I L V R KLP
Sbjct: 236 RLGERYLLTGENASFKLVFDMAALITGTKKPNFSIPLWAINAYGWLSVLISRVTGKLPLI 295
Query: 392 GDVPFT---HA---NISLAQRELGYKPTTDLQTGLKKFVRWYLS 429
T H + A+ ELGY P + L+ GL++ + W S
Sbjct: 296 SPPTVTVLRHQWSYSCDKAKLELGYNPRS-LKEGLEEMLPWLKS 338
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+LVTG+ G +G+ + +K R V G N +++ ++ SG F D+
Sbjct: 4 ILVTGSLGQIGSEL--VMKLRD--VYGASNV---IATDIRETDSEVVT-SGPFETL-DVT 54
Query: 162 DMALLKKLFDVVSFTHV---MHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D +KL D+ V +HLAA A +NP + N+ GLV+ LE + N +
Sbjct: 55 DG---QKLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCK 110
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRF 278
SS +G +T + +D +P ++Y K AGE + Y+ +G+ G+RF
Sbjct: 111 --FFTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRF 168
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+LVTG+ G +G+ + +K R V G N +++ ++ SG F D+
Sbjct: 4 ILVTGSLGQIGSEL--VMKLRD--VYGASNV---IATDIRETDSEVVT-SGPFETL-DVT 54
Query: 162 DMALLKKLFDVVSFTHV---MHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D +KL D+ V +HLAA A +NP + N+ GLV+ LE + N +
Sbjct: 55 DG---QKLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCK 110
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRF 278
SS +G +T + +D +P ++Y K AGE + Y+ +G+ G+RF
Sbjct: 111 --FFTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRF 168
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 125 (49.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 47/182 (25%), Positives = 81/182 (44%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPS-LKKARQALLERSGIFIVE-GDI 160
L+TG G G++++ L +G V G+ + ++ + + E F + GD+
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYGDL 66
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCK--NANPQ 218
D + L ++ V V +L AQ+ V + Q+P + G + LLE + +
Sbjct: 67 TDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLTKK 126
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLTGL 276
AS+S +YGL ++P +K+ T P S YA K I Y YG+ + G+
Sbjct: 127 TKFYQASTSELYGLVQEIP--QKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACNGI 184
Query: 277 RF 278
F
Sbjct: 185 LF 186
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 402 SLAQRELGYKPTTDLQTGLKKFV 424
SLA++ELG+ P LQ + + V
Sbjct: 326 SLAKKELGWVPEITLQQMVSEMV 348
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 125 (49.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 47/182 (25%), Positives = 81/182 (44%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPS-LKKARQALLERSGIFIVE-GDI 160
L+TG G G++++ L +G V G+ + ++ + + E F + GD+
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYGDL 66
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCK--NANPQ 218
D + L ++ V V +L AQ+ V + Q+P + G + LLE + +
Sbjct: 67 TDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLTKK 126
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLTGL 276
AS+S +YGL ++P +K+ T P S YA K I Y YG+ + G+
Sbjct: 127 TKFYQASTSELYGLVQEIP--QKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACNGI 184
Query: 277 RF 278
F
Sbjct: 185 LF 186
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 402 SLAQRELGYKPTTDLQTGLKKFV 424
SLA++ELG+ P LQ + + V
Sbjct: 326 SLAKKELGWVPEITLQQMVSEMV 348
>WB|WBGene00022616 [details] [associations]
symbol:hsd-3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:FO081547 RefSeq:NP_508852.3 ProteinModelPortal:A4UVJ7
EnsemblMetazoa:ZC449.6 GeneID:260026 KEGG:cel:CELE_ZC449.6
CTD:260026 WormBase:ZC449.6 HOGENOM:HOG000266975 InParanoid:A4UVJ7
OMA:IVVDPNP NextBio:952782 Uniprot:A4UVJ7
Length = 359
Score = 127 (49.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 49/193 (25%), Positives = 89/193 (46%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLE--RSGIFIVEGDI 160
++TG GF+G H+ AAL++ GD + DP+ + + + ++ +S + +G
Sbjct: 8 VITGGGGFLGAHLIAALQKNGDRTKCI-----VVDPNPRLSHFSAIDFDKSLVEYEKGSF 62
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVR-YAMQNPNSYVHS-NIAGLVSLLEVCKNANPQ 218
D +L+++ + T V HL A + Q YV++ N+ G L+E CK
Sbjct: 63 LDRKVLERVLPN-AIT-VFHLCAIGHTGWFGAQKHREYVYAFNVTGTKFLIEKCKFFGV- 119
Query: 219 PAIVWASSSSV-------YGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL 271
P +++SS +V Y + P+ K + +Y+++K E + + I
Sbjct: 120 PRFIYSSSIAVVFVGKPIYNCDESEPYPLKS---EYLDIYSSSKAEAEAFVRSQSTIQ-F 175
Query: 272 SLTGLRFFTVYGP 284
T LRF +YGP
Sbjct: 176 KTTCLRFRAIYGP 188
Score = 42 (19.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 400 NISLAQRELGYKPTTDL 416
+I A+RELGY P +L
Sbjct: 334 SIEKARRELGYCPEQNL 350
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 51/185 (27%), Positives = 79/185 (42%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVE- 157
L+TG G G++++ L +G V G+ +FN L S F +
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLY-GNPVTHNGSASFSLHY 95
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEV---CKN 214
GD+ D + L KL + T + HLAAQ+ V+ + P + G + LL+ C+
Sbjct: 96 GDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR- 154
Query: 215 ANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL-SL 273
+ AS+S +YG ++P SE P S YA K G I Y Y + +
Sbjct: 155 LTEKVRFYQASTSELYGKVQEIPQSELTPF-YPRSPYAVAKMYGYWIVVNYREAYKMFAC 213
Query: 274 TGLRF 278
G+ F
Sbjct: 214 NGILF 218
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 51/185 (27%), Positives = 79/185 (42%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVE- 157
L+TG G G++++ L +G V G+ +FN L S F +
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLY-GNPVTHNGSASFSLHY 95
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEV---CKN 214
GD+ D + L KL + T + HLAAQ+ V+ + P + G + LL+ C+
Sbjct: 96 GDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR- 154
Query: 215 ANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL-SL 273
+ AS+S +YG ++P SE P S YA K G I Y Y + +
Sbjct: 155 LTEKVRFYQASTSELYGKVQEIPQSELTPF-YPRSPYAVAKMYGYWIVVNYREAYKMFAC 213
Query: 274 TGLRF 278
G+ F
Sbjct: 214 NGILF 218
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 105 (42.0 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 47/182 (25%), Positives = 77/182 (42%)
Query: 158 GDI-NDMALLKKLFDV-VSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNA 215
GD+ N ALL L DV V+F H A+ A + N + N G +++E CK A
Sbjct: 55 GDLCNKEALLPALQDVSVAF----HCASPAP---SSDNKELFYKVNFMGTKAVIEACKEA 107
Query: 216 NPQPAIVWASSSSVY-GLNTKVPFSEKDRTDQPASLYAATKKAGE-EIAHTYNHIYGLSL 273
Q ++ +S+S V+ G + K + +P Y TK E E+ +
Sbjct: 108 GVQKLVLTSSASVVFEGTDIKNGTEDLPYAKKPIDYYTETKILQEKEVLSANDPDNNFFT 167
Query: 274 TGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAA 333
T +R ++GP P + + I + G DFTY++++V G + A
Sbjct: 168 TAIRPHGIFGPRD-PQLVPILIQAAKSGKMKFIIGD----GKNLVDFTYVENVVHGHILA 222
Query: 334 LD 335
+
Sbjct: 223 AE 224
Score = 55 (24.4 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 372 ILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWY 427
+L L+ +K M++ G F + + A+R++GYKP L + + ++ Y
Sbjct: 285 LLSPLIIIKPTFTPMRVALAGT--FHYYSCERAKRDMGYKPVVSLDEAIDRTLQSY 338
Score = 45 (20.9 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGV 126
G +V G +GF+G H+ L +G V
Sbjct: 9 GKKCVVIGGSGFLGQHMVEKLLDKGYSV 36
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 120 (47.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 43/168 (25%), Positives = 76/168 (45%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+L+TG AGFVG+H++ L G V +DNF K+ + + ++ D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 88
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ L+ + + HLA+ A M NP + +N G +++L + K + +
Sbjct: 89 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 222 VWASSSSVYGLNTKVPFSEK--DRTDQ--PASLYAATKKAGEEIAHTY 265
+ AS+S VYG P SE + P + Y K+ E + + Y
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 118 (46.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 64/299 (21%), Positives = 121/299 (40%)
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPN-SYVHSNIAGLVSLLEVCKNA 215
+ D+ ++A + LF THV+HLAA G + N N ++ +N+ L++ V + A
Sbjct: 38 DADLTNLAATQALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNL--LIND-NVLQTA 94
Query: 216 NPQPAIVWAS--SSSVYGLNTKVPFSEK---DRTDQPASL-YAATKKAGEEIAHTYNHIY 269
+ Q + S S+ ++ T P E + P++ Y+ K+ + H Y+ Y
Sbjct: 95 HEQGCVKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKY 154
Query: 270 GLSLTGLRFFTVYGPWGR--PDMAY-----FFFTRDILNRKS-IP----IFESPDHGTVA 317
G T + ++GP P++++ + ++ K+ +P +F G
Sbjct: 155 GRVYTSVIPCNIFGPHDNYNPEVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPL 214
Query: 318 RDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLL 377
R F Y D+ + + L E ++ +F + V+ + RL+
Sbjct: 215 RQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQA----VAKAFNFNGRLV 270
Query: 378 KVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYYAGGKK 436
+K + G T +N L Y TDL+T + V+WY+ Y +K
Sbjct: 271 CDTSKSD-------GQYKKTASNAKLRSFLPDYA-FTDLETAINASVKWYIENYDQARK 321
Score = 49 (22.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 102 VLVTGAAGFVGTHVSAALKRR 122
VLVTG G VG + A +K +
Sbjct: 4 VLVTGGTGLVGKALEAVIKEQ 24
>RGD|2838 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 5" species:10116 "Rattus norvegicus"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0005496 "steroid binding" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;IDA;TAS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016229 "steroid dehydrogenase activity"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0042448 "progesterone metabolic process" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=IDA] [GO:0051287 "NAD binding" evidence=IDA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:2838 GO:GO:0043231 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 GO:GO:0051287 GO:GO:0005496
GeneTree:ENSGT00550000074557 CTD:15496 EMBL:M67465 EMBL:BC092571
IPI:IPI00231782 PIR:A37404 RefSeq:NP_036716.1 RefSeq:XP_003749408.1
UniGene:Rn.34902 ProteinModelPortal:P27364 STRING:P27364
PhosphoSite:P27364 PRIDE:P27364 Ensembl:ENSRNOT00000026290
GeneID:100911116 GeneID:24470 KEGG:rno:100911116 KEGG:rno:24470
UCSC:RGD:2838 InParanoid:P27364 BindingDB:P27364 ChEMBL:CHEMBL4490
NextBio:603409 Genevestigator:P27364 GermOnline:ENSRNOG00000019417
GO:GO:0042448 GO:GO:0050810 Uniprot:P27364
Length = 373
Score = 118 (46.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 38/148 (25%), Positives = 70/148 (47%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA GF+G + L + + + + + P K+ L ++ + ++ G
Sbjct: 3 GWSCLVTGAGGFLGQRIVQMLVQEKE-LQEVRVLYRTFSPKHKEELSKLQTKAKVTVLRG 61
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D L++ +S ++H AA + + + + N+ G LL+ C A+
Sbjct: 62 DIVDAQFLRRACQGMSV--IIHTAAALDIAGFLPR-QTILDVNVKGTQLLLDACVEASV- 117
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQ 246
PA +++SS+ V G N+ DR ++
Sbjct: 118 PAFIYSSSTGVAGPNSYKETILNDREEE 145
Score = 50 (22.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGY+P + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 126 (49.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 57/192 (29%), Positives = 90/192 (46%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFND------YYDPSLKKARQALLERSG 152
L+TG G G++++ L +G V GL NFN Y DP +AL++
Sbjct: 32 LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH--NVNKALMK--- 86
Query: 153 IFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIA-GLVSLLEV 211
+ D+ D + L++ DV+ V +LAAQ+ V + + P+ Y +A G + LLE
Sbjct: 87 --LHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEA 143
Query: 212 CKN--ANPQPAIVW--ASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNH 267
++ + + + A SS ++G +T P SE P S YAA+K A Y
Sbjct: 144 VRSHTIDSGRTVKYYQAGSSEMFG-STPPPQSETTPF-HPRSPYAASKCAAHWYTVNYRE 201
Query: 268 IYGL-SLTGLRF 278
YGL + G+ F
Sbjct: 202 AYGLFACNGILF 213
Score = 41 (19.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 390 RNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVR 425
R +V + S A+ LG+KP Q G +K V+
Sbjct: 314 RPAEVDNLQGDASKAKEVLGWKP----QVGFEKLVK 345
>UNIPROTKB|P14893 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9913 "Bos taurus" [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0004769 "steroid delta-isomerase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0016021 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0031966 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:X17614 EMBL:BC111203
IPI:IPI00703764 PIR:S07102 RefSeq:NP_776768.1 UniGene:Bt.111390
ProteinModelPortal:P14893 STRING:P14893 PRIDE:P14893
Ensembl:ENSBTAT00000010992 GeneID:281824 KEGG:bta:281824
InParanoid:P14893 NextBio:20805734 Uniprot:P14893
Length = 373
Score = 120 (47.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 45/167 (26%), Positives = 75/167 (44%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTG GF+G + L D + + + + P +++ L + + ++EG
Sbjct: 3 GWSCLVTGGGGFLGQRIICLLVEEKD-LQEIRVLDKVFRPEVREEFSKLQSKIKLTLLEG 61
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D LK S V+H A+ VR A+ + ++ N+ G LLE C A+
Sbjct: 62 DILDEQCLKGACQGTSV--VIHTASVIDVRNAVPR-ETIMNVNVKGTQLLLEACVQASV- 117
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQP-----ASLYAATKKAGEE 260
P + S+ V G N+ + R ++ +S Y +KK E+
Sbjct: 118 PVFIHTSTIEVAGPNSYREIIQDGREEEHHESAWSSPYPYSKKLAEK 164
Score = 47 (21.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGY+P + +K W
Sbjct: 334 AQRDLGYEPLYTWEEAKQKTKEW 356
>MGI|MGI:96235 [details] [associations]
symbol:Hsd3b3 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 3" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96235 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0005743 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:M77015 IPI:IPI00111855
RefSeq:NP_001155214.1 RefSeq:NP_001155215.1 RefSeq:NP_001155216.1
RefSeq:NP_001155217.1 UniGene:Mm.158717 ProteinModelPortal:P26150
SMR:P26150 STRING:P26150 PaxDb:P26150 PRIDE:P26150
Ensembl:ENSMUST00000090743 Ensembl:ENSMUST00000107018
Ensembl:ENSMUST00000107019 GeneID:15494 KEGG:mmu:15494 CTD:15494
InParanoid:P26150 SABIO-RK:P26150 NextBio:288374 Bgee:P26150
Genevestigator:P26150 GermOnline:ENSMUSG00000062410 Uniprot:P26150
Length = 373
Score = 117 (46.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 40/136 (29%), Positives = 66/136 (48%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTGA GF+G + L + D + + + + P ++ L + ++EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIQLLVQEKD-LEEIRVLDKVFKPETREQFFNLGTSIKVTVLEG 61
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D L++ +S V+H AA V + + + N+ G +LLE C A+
Sbjct: 62 DILDTQYLRRACQGISV--VIHTAAIIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 219 PAIVWASSSSVYGLNT 234
PA +++SS V G N+
Sbjct: 118 PAFIFSSSVDVAGPNS 133
Score = 50 (22.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGY+P + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K QA +E + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + G + LL+ K
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 275 GLRF 278
G+ F
Sbjct: 204 GILF 207
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 125 (49.1 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K QA +E + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + G + LL+ K
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 145
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 275 GLRF 278
G+ F
Sbjct: 204 GILF 207
Score = 39 (18.8 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 386 MKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFV 424
+K R +V F + + A+++L +KP +++ V
Sbjct: 321 LKYYRPTEVDFLQGDCTKAKQKLNWKPRVPFDELVREMV 359
>UNIPROTKB|P96816 [details] [associations]
symbol:Rv0139 "Dihydroflavonol-4-reductase" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GO:GO:0005618 GO:GO:0003824 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
HOGENOM:HOG000168005 EMBL:CP003248 PIR:F70616 RefSeq:NP_214653.1
RefSeq:NP_334557.1 RefSeq:YP_006513458.1 SMR:P96816 DNASU:886860
EnsemblBacteria:EBMYCT00000002589 EnsemblBacteria:EBMYCT00000072636
GeneID:13316122 GeneID:886860 GeneID:923018 KEGG:mtc:MT0147
KEGG:mtu:Rv0139 KEGG:mtv:RVBD_0139 PATRIC:18122051
TubercuList:Rv0139 KO:K00091 OMA:QAENLVM ProtClustDB:CLSK790293
Uniprot:P96816
Length = 340
Score = 123 (48.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 50/194 (25%), Positives = 86/194 (44%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
LV GA GF+G+HV+ L D P+ A ++ + GD+ D
Sbjct: 6 LVIGANGFLGSHVTRQLV--ADCAPQKGEVRAMVRPA---ANTRSIDDLPLTRFHGDVFD 60
Query: 163 MALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIV 222
A + + + V + R +++P+ +N+AGL ++L+V +A+ + V
Sbjct: 61 TATVAEA--MAGCDDVYYCVVDT--RAWLRDPSPLFRTNVAGLRNVLDVATDASLR-RFV 115
Query: 223 WASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 281
+ SS + G +E+DR D + + Y ++ A E++ Y H GL + T
Sbjct: 116 FTSSYATVGRRRGHVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTT 175
Query: 282 YG--PWGR-PDMAY 292
YG WGR P A+
Sbjct: 176 YGGGDWGRTPHGAF 189
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 114 (45.2 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 40/147 (27%), Positives = 68/147 (46%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
LVTG GF+G HV L +R + L F+ + P L++ + + + ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVR---VTAIQGDVTQ 69
Query: 163 MALLKKLFDVVSFTHVM-HLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ V+ HV+ H A V + +P + N+ G +++E C + +
Sbjct: 70 A---HEVAAAVAGAHVVIHTAGLVDV-FGRASPKTIHEVNVQGTRNVIEACVQTGTR-FL 124
Query: 222 VWASSSSVYGLNTKV-PFSEKDRTDQP 247
V+ SS V G NTK PF + D P
Sbjct: 125 VYTSSMEVVGPNTKGHPFY-RGNEDTP 150
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 114 (45.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 59/301 (19%), Positives = 121/301 (40%)
Query: 144 RQALLERSGIFIVEGDINDMALL--KKLFDVVSFTHV--MHLAAQ--AGVRYAMQNPNSY 197
R+ L +R + +V +++ LL + + D + + ++LAA G+ P +
Sbjct: 20 RRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADF 79
Query: 198 VHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNTKVPFSEKDR---TDQPASL-YAA 253
++ N+ +++ + N +++ SS +Y K P +E + T +P + YA
Sbjct: 80 IYQNMMIESNIIHAA-HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAI 138
Query: 254 TKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILNR-KSIPIFESPD 312
K AG ++ +YN YG + +YGP + +L R +PD
Sbjct: 139 AKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPD 198
Query: 313 -----HGTVARDFTYIDDIVKGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVS 367
GT R+F ++DD+ + ++ A L N+G +
Sbjct: 199 VVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQ----PMLSHINVGTGVDCTIR 254
Query: 368 DLVSILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWY 427
+L + +++ K R + + P +++ +LG+ L+ GL +W+
Sbjct: 255 ELAQTIAKVVGYKG-RVVFDASKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWF 312
Query: 428 L 428
L
Sbjct: 313 L 313
Score = 48 (22.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGD 124
V + G G VG+ + L++RGD
Sbjct: 6 VFIAGHRGMVGSAIRRQLEQRGD 28
>GENEDB_PFALCIPARUM|PF10_0137 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0016491
"oxidoreductase activity" evidence=ISS] [GO:0016857 "racemase and
epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=ISS]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0016491 GO:GO:0006486
EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 47/238 (19%), Positives = 101/238 (42%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG--DI 160
LVTG G +G+ + +K ++ +N + + + IF+ D+
Sbjct: 6 LVTGGTGLLGSSLREVIKNENKNIIEKEN-----EIIVNSNENKNIITKYIFLSSEMCDL 60
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPN-SYVHSNIAGLVSLLEVCKNANPQP 219
D K +F+ +FT ++H AA G YA +N N ++ +N+ ++++++C +
Sbjct: 61 KDYDKSKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISR 120
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTD----QPASLYAATKKAGEEIAHTYNHIYGLSLTG 275
I + S+ ++ +N +P +E+ D Q Y+ +K+ E + Y Y
Sbjct: 121 GI-FTLSTCIFPVNCSLPLTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWIC 179
Query: 276 LRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPD-----HGTVARDFTYIDDIVK 328
+ +YG + ++ I+++ + + + G+ R F Y D+ K
Sbjct: 180 IIPTNIYGKYDNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAVRQFIYNIDVNK 237
>UNIPROTKB|Q8IJQ5 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006486 "protein
glycosylation" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0016491
GO:GO:0006486 EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 47/238 (19%), Positives = 101/238 (42%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG--DI 160
LVTG G +G+ + +K ++ +N + + + IF+ D+
Sbjct: 6 LVTGGTGLLGSSLREVIKNENKNIIEKEN-----EIIVNSNENKNIITKYIFLSSEMCDL 60
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPN-SYVHSNIAGLVSLLEVCKNANPQP 219
D K +F+ +FT ++H AA G YA +N N ++ +N+ ++++++C +
Sbjct: 61 KDYDKSKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISR 120
Query: 220 AIVWASSSSVYGLNTKVPFSEKDRTD----QPASLYAATKKAGEEIAHTYNHIYGLSLTG 275
I + S+ ++ +N +P +E+ D Q Y+ +K+ E + Y Y
Sbjct: 121 GI-FTLSTCIFPVNCSLPLTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWIC 179
Query: 276 LRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPD-----HGTVARDFTYIDDIVK 328
+ +YG + ++ I+++ + + + G+ R F Y D+ K
Sbjct: 180 IIPTNIYGKYDNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAVRQFIYNIDVNK 237
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 125 (49.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K QA +E + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + G + LL+ K
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 145
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 275 GLRF 278
G+ F
Sbjct: 204 GILF 207
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 386 MKLPRNGDVPFTHANISLAQRELGYKP 412
+K R +V F + + A+++L +KP
Sbjct: 321 LKYYRPTEVDFLQGDCTKAKQKLNWKP 347
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 125 (49.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K QA +E + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + G + LL+ K
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 145
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 275 GLRF 278
G+ F
Sbjct: 204 GILF 207
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 386 MKLPRNGDVPFTHANISLAQRELGYKP 412
+K R +V F + + A+++L +KP
Sbjct: 321 LKYYRPTEVDFLQGDCTKAKQKLNWKP 347
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 67/250 (26%), Positives = 98/250 (39%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFND------YYDPSLKKARQALLERSG 152
L+TG G G++++ L +G V GL FN Y DP AR
Sbjct: 5 LITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGAR-------- 56
Query: 153 IFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVC 212
+F+ GD+ D L L + V +LAAQ+ VR + P + G + LLE
Sbjct: 57 LFLHYGDLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAV 116
Query: 213 KNANPQPAIVWASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL 271
+ + ASSS ++G + P + + T P S Y A K Y YGL
Sbjct: 117 RLSRVHCRFYQASSSEMFGAS---PPPQNELTPFYPRSPYGAAKVYSYWATRNYREAYGL 173
Query: 272 -SLTGLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPIFESPDHGTV--ARDFTYIDDIVK 328
++ G+ F P TR + K+ I G + RD+ Y + V+
Sbjct: 174 FAVNGI-LFNHESPRRGETFVTRKITRAVARIKA-GIQSEVYMGNLDAVRDWGYAPEYVE 231
Query: 329 GCLAALDTAE 338
G L T E
Sbjct: 232 GMWRMLQTDE 241
>UNIPROTKB|Q60AF9 [details] [associations]
symbol:MCA0903 "Polysaccharide biosynthesis protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017282 GenomeReviews:AE017282_GR HOGENOM:HOG000257078
RefSeq:YP_113388.1 ProteinModelPortal:Q60AF9 GeneID:3103120
KEGG:mca:MCA0903 PATRIC:22605604 OMA:PIFKKQI
ProtClustDB:CLSK2765708 Uniprot:Q60AF9
Length = 615
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 50/191 (26%), Positives = 80/191 (41%)
Query: 98 NGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDY--YDPSLKKARQALLERSGIFI 155
+G ++VTG G +G+ + + R G L + ++ Y L+ RQA + + I
Sbjct: 282 DGKCIMVTGGGGSIGSELCKQIARFSPGRLVVFEHCEFNLYRVELE-LRQAFPDMA-IHA 339
Query: 156 VEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNA 215
V GD+ D A +++ DV + H AA V Q V +N+ G ++ EV
Sbjct: 340 VLGDVTDAASVRRAIDVHKPAIIFHAAAYKHVPLLQQQVREAVFNNVIGTRTVAEVAVE- 398
Query: 216 NPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTG 275
YG+ V S D+ P ++ ATK+A E + +YN
Sbjct: 399 --------------YGVGEFVLIST-DKAVNPTNVMGATKRAAELVVQSYNGHTATRFIT 443
Query: 276 LRFFTVYGPWG 286
+RF V G G
Sbjct: 444 VRFGNVLGSAG 454
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 58/210 (27%), Positives = 91/210 (43%)
Query: 102 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIN 161
+LVTG AG+VG+ + L G V D + D L K E + IVEGDI
Sbjct: 8 ILVTGGAGYVGSALVPQLLELGYRVTVYDTLF-FGDDFLPK------ENPYLNIVEGDIR 60
Query: 162 DMALLKKLFDVVSFTHVMHLAAQAG-VRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
D LK+ F V+ LA + + + S N+ +++ K A +
Sbjct: 61 DTERLKQCFKDADA--VISLACISNDASFELDETLS-TSINLEAFEPMVKAAKAAGVK-R 116
Query: 221 IVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 280
++ASSSSVYG++ +E+ P +LY K E + + + +T +R T
Sbjct: 117 FIYASSSSVYGVSETKDVTEEHPL-VPLTLYNKYKGMCEPLLFKHQSPEFVCVT-IRPAT 174
Query: 281 V--YGPWGRPDMAYFFFTRDILNRKSIPIF 308
+ Y P R D++ T +N I +F
Sbjct: 175 LCGYAPRQRLDLSVNILTNHAVNNNKITVF 204
>UNIPROTKB|Q8WUS8 [details] [associations]
symbol:SDR42E1 "Short-chain dehydrogenase/reductase family
42E member 1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 EMBL:CH471114
CTD:93517 HOGENOM:HOG000168007 OrthoDB:EOG40ZQZ0 EMBL:AK315652
EMBL:BC019670 EMBL:AF161368 IPI:IPI00163504 RefSeq:NP_660151.2
UniGene:Hs.87779 ProteinModelPortal:Q8WUS8 SMR:Q8WUS8
PhosphoSite:Q8WUS8 DMDM:187661956 PRIDE:Q8WUS8 DNASU:93517
Ensembl:ENST00000328945 GeneID:93517 KEGG:hsa:93517 UCSC:uc002fgu.3
GeneCards:GC16M082031 HGNC:HGNC:29834 HPA:HPA014388
neXtProt:NX_Q8WUS8 PharmGKB:PA164725636 InParanoid:Q8WUS8
OMA:FVWDGLL PhylomeDB:Q8WUS8 GenomeRNAi:93517 NextBio:78110
ArrayExpress:Q8WUS8 Bgee:Q8WUS8 Genevestigator:Q8WUS8
Uniprot:Q8WUS8
Length = 393
Score = 119 (46.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 36/129 (27%), Positives = 61/129 (47%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDI 160
SVL+TG +G+ G + AL + G V+ D + Q + E GI ++GDI
Sbjct: 10 SVLITGGSGYFGFRLGCALNQNGVHVILFD---------ISSPAQTIPE--GIKFIQGDI 58
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPA 220
++ ++K F T V H+A+ N N N+ G ++L+VC+ P
Sbjct: 59 RHLSDVEKAFQDADVTCVFHIASYGMSGREQLNRNLIKEVNVRGTDNILQVCQRRRV-PR 117
Query: 221 IVWASSSSV 229
+V+ S+ +V
Sbjct: 118 LVYTSTFNV 126
Score = 44 (20.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 397 THA-NISLAQRELGYKPTT-DLQTGLKKF 423
TH ++ A++ELGYK DLQ ++ F
Sbjct: 322 THYFSLEKAKKELGYKAQPFDLQEAVEWF 350
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 112 (44.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 46/187 (24%), Positives = 83/187 (44%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
++ G GF+G HV +AL++ +G DP ++ + +++S I ++ D
Sbjct: 5 VIVGGGGFLGAHVISALQK-----IGCKERIIVVDPCPQEFKTIKIDKSNISYIKASFLD 59
Query: 163 MALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHS-NIAGLVSLLEVCKNANPQPAI 221
+L+ + + S V+HLAA G + VH+ N+ G L++ CK +
Sbjct: 60 DKVLENILNGASA--VVHLAA-VGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALGVK-RF 115
Query: 222 VWASSSSVYGLNTKVP-FSEKDRTDQPAS---LYAATKKAGEEIAHTYNHIYGLSLTGLR 277
++ASS +V + + +E D P Y+A+K E + + LR
Sbjct: 116 LYASSVAVSFIGEPLDNVTEDDPLPDPKKYLDFYSASKAEAETYVLSQS-TPDFKTVCLR 174
Query: 278 FFTVYGP 284
F +YGP
Sbjct: 175 FRGIYGP 181
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 400 NISLAQRELGYKPTTDLQTGLKKF 423
+I A+RELGY+P + T + K+
Sbjct: 313 SIERARRELGYEPEPCVMTDVAKY 336
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 77 (32.2 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 42/162 (25%), Positives = 64/162 (39%)
Query: 176 THVMHLAAQA-GVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVYGLNT 234
T V H A+ G+ Y + Y N+ G L+E C + + +SSS V+
Sbjct: 65 TTVFHTASPTHGMGYDI-----YYSVNVIGTERLIEACIKCGVKQLVYTSSSSVVFNGKD 119
Query: 235 KVPFSEK-DRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYF 293
V E D+ Y TK+ GE L + LR ++GP R +
Sbjct: 120 IVNGDETLPYVDKHIDPYNKTKELGERAVLKAKGS-NLLVCALRPAGIFGP--REVQGWP 176
Query: 294 FFTRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
F + K+ +F G D+TYID++V + A D
Sbjct: 177 QFLKAAKEGKNKFMFGD---GNNLCDWTYIDNVVHAHILAAD 215
Score = 72 (30.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 400 NISLAQRELGYKPTTDLQTGLKKFVRWYL 428
NI A++EL YKP L+ G++K W+L
Sbjct: 302 NIEKAKKELKYKPIVSLRDGMEKTKEWFL 330
Score = 52 (23.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 101 SVLVTGAAGFVGTHVSAALKRRGD 124
S LV G GF+G ++ +L RG+
Sbjct: 4 SYLVVGGCGFLGRYIVESLLARGE 27
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 117 (46.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 56/284 (19%), Positives = 116/284 (40%)
Query: 162 DMALLKKLFDVVSFT---HVMHLAAQAG-VRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
D+ +K+F+ + +V AA+ G + + +P ++ N+A +++E
Sbjct: 41 DLTNKEKVFEFFANNCPEYVFLAAARVGGINDSNLHPVDFIRDNLAIQWNVIEASFRYKV 100
Query: 218 QPAIVWASSSSVYGLNTKVPFSE----KDRTDQPASLYAATKKAGEEIAHTYNHIYGLSL 273
+ +++ SS +Y + P E + + Y+ K AG E YN Y
Sbjct: 101 K-RLLFLGSSCIYSNDAPRPLKEIYFNSGKLEPTNRAYSTAKIAGIEHCWAYNRQYKTQY 159
Query: 274 TGLRFFTVYGPWGRPDMAYFFFTRDILNR------KSIPIFESPDHGTVARDFTYIDDIV 327
++GP D+ ++++ + P F G R+F Y DD+
Sbjct: 160 LCAMPTNLFGPNDNYDLENGHVVASLISKIHQAKEQKKPNFVLWGSGKAKREFLYSDDLA 219
Query: 328 KGCLAALDTAEXXXXXXXXXXXXAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMK 387
+ C ++ + Q + N+G+ + + +L +++ ++ + +I+
Sbjct: 220 EACCHLMNLPDDIVKSVFGQDD--QPPIVNIGSGKEISIYELALLIQDIIGYQG--DIIW 275
Query: 388 LPRNGDVPFTHA-NISLAQRELGYKPTTDLQTGLKKFVRWYLSY 430
D T ++SL Q LG+ L +G+KK ++YLSY
Sbjct: 276 DHSKPDGALTKVMDVSLMQY-LGWSAREGLVSGIKKTYQYYLSY 318
Score = 43 (20.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 102 VLVTGAAGFVGTHVSAALKRRG 123
+ VTG G G+ + LK++G
Sbjct: 7 IFVTGHRGLAGSAILRRLKKQG 28
>UNIPROTKB|F1NP20 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:AADN02037787 IPI:IPI00581332
Ensembl:ENSGALT00000030483 Uniprot:F1NP20
Length = 377
Score = 121 (47.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 44/167 (26%), Positives = 75/167 (44%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G+S LVTGA GF+G + L + + + + + + ++ + I+EG
Sbjct: 5 GVSCLVTGAGGFLGQRIVRLLLEEDEALAEIRLLDKAFSREALWSFGKFQGKTEVKILEG 64
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D+ L + VS V+H A+ ++ + N+ G LLE C + N Q
Sbjct: 65 DIRDVEFLHRACQGVSL--VIHTASIIDTLGLVEKQLLW-EVNVTGTQMLLEACAHCNVQ 121
Query: 219 PAIVWASSSSVYGLNTKV-PF--SEKDRTDQPASL--YAATKKAGEE 260
++ S+ V G N + P ++D T + S YA +K+ EE
Sbjct: 122 H-FIYTSTIEVAGPNCRGDPIFNGDEDTTYESTSKFPYAQSKRLAEE 167
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 393 DVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLS 429
+ PFT + AQ++ GY P + + +W S
Sbjct: 328 NTPFTFS-YRKAQKDFGYVPRYTWEEAKRYTSQWIAS 363
>RGD|1592771 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid
dehydrogenase/delta-5-delta-4 isomerase type II" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:1592771 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 111 (44.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 40/138 (28%), Positives = 66/138 (47%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGD--GVLGLDNFNDYYDPSLKKARQALLERSGIFIV 156
G S LVTGA GFVG + L + + V LD + P K+ L ++ + ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
EGDI D L++ +S V+H A+ + + + N+ G +LLE +A+
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHAS 116
Query: 217 PQPAIVWASSSSVYGLNT 234
PA ++ S+ V G N+
Sbjct: 117 V-PAFIYCSTVDVAGPNS 133
Score = 50 (22.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGY+P + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P22072 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:1592771
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 111 (44.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 40/138 (28%), Positives = 66/138 (47%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGD--GVLGLDNFNDYYDPSLKKARQALLERSGIFIV 156
G S LVTGA GFVG + L + + V LD + P K+ L ++ + ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
EGDI D L++ +S V+H A+ + + + N+ G +LLE +A+
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHAS 116
Query: 217 PQPAIVWASSSSVYGLNT 234
PA ++ S+ V G N+
Sbjct: 117 V-PAFIYCSTVDVAGPNS 133
Score = 50 (22.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
AQR+LGY+P + +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|F1NA93 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:DACVEAS EMBL:AADN02037787
IPI:IPI00820848 Ensembl:ENSGALT00000023813 Uniprot:F1NA93
Length = 401
Score = 121 (47.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 44/167 (26%), Positives = 75/167 (44%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G+S LVTGA GF+G + L + + + + + + ++ + I+EG
Sbjct: 31 GVSCLVTGAGGFLGQRIVRLLLEEDEALAEIRLLDKAFSREALWSFGKFQGKTEVKILEG 90
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D+ L + VS V+H A+ ++ + N+ G LLE C + N Q
Sbjct: 91 DIRDVEFLHRACQGVSL--VIHTASIIDTLGLVEKQLLW-EVNVTGTQMLLEACAHCNVQ 147
Query: 219 PAIVWASSSSVYGLNTKV-PF--SEKDRTDQPASL--YAATKKAGEE 260
++ S+ V G N + P ++D T + S YA +K+ EE
Sbjct: 148 H-FIYTSTIEVAGPNCRGDPIFNGDEDTTYESTSKFPYAQSKRLAEE 193
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 393 DVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLS 429
+ PFT + AQ++ GY P + + +W S
Sbjct: 354 NTPFTFS-YRKAQKDFGYVPRYTWEEAKRYTSQWIAS 389
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 119 (46.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 48/184 (26%), Positives = 83/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K A +E + + G
Sbjct: 38 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHIE-GNMKLHYG 96
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + G + LL+ K
Sbjct: 97 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGLGTLRLLDATKTCGLI 156
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 157 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 214
Query: 275 GLRF 278
G+ F
Sbjct: 215 GILF 218
Score = 41 (19.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 387 KLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFV 424
K R +V F + S A+ +LG+ P +K+ V
Sbjct: 333 KYYRPTEVEFLQGDCSKAKNKLGWIPKVSFNELVKEMV 370
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 112 (44.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 57/226 (25%), Positives = 94/226 (41%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
LVTG GF+G HV L +R +L L F+ + L++ + ++ + ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLLELRVFDLHLGAWLEELKTGPVQ---VTAIQGDVTQ 69
Query: 163 MALLKKLFDVVSFTHVM-HLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ V+ HV+ H A V + +P + N+ G +++E C + +
Sbjct: 70 A---HEVAAAVAGAHVVIHTAGLVDV-FGRASPETIYEVNVQGTKNVIEACVQTGTR-FL 124
Query: 222 VWASSSSVYGLNTKVPFSEKDRTDQPASL-----YAATKKAGEEIAHTYN--HIYG-LSL 273
V+ SS V G N K + D P Y +K E + N ++G L L
Sbjct: 125 VYTSSMEVVGPNIKGHHFYRGNEDTPYEAVHRHPYPCSKAQAERLVLEANGRKVHGGLPL 184
Query: 274 T--GLRFFTVYGPWGRPDMAYFFFTRDILNRKSI-PIFESPDHGTV 316
LR +YG G M F+ L + I S +HG V
Sbjct: 185 VTCALRPTGIYGE-GHQIMRDFYHQGLRLGGRLFRTIPASVEHGRV 229
Score = 48 (22.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 396 FTHANISLAQRELGYKPTTDLQTGLKKFVRW 426
FT N A+R GY+P + + +RW
Sbjct: 331 FT-VNTDKARRHFGYEPLFSWEDSRTRTIRW 360
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 46/181 (25%), Positives = 78/181 (43%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPS-LKKARQALLERSGIFIVE-GDI 160
L+TG G G++++ L +G V G+ + + + Q E++ F + GD+
Sbjct: 8 LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFLHYGDL 67
Query: 161 NDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCK--NANPQ 218
D + L ++ V V +L AQ+ V + + P + G + LLE + +
Sbjct: 68 TDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAIGTLRLLEAIRFLGLEKK 127
Query: 219 PAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL-SLTGLR 277
AS+S +YG ++P SE P S YA K I Y YG+ + G+
Sbjct: 128 TKFYQASTSELYGEVQEIPQSETTPF-HPRSPYAVAKMYAYWIVVNYRESYGMYACNGIL 186
Query: 278 F 278
F
Sbjct: 187 F 187
>UNIPROTKB|Q9N119 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9823 "Sus scrofa" [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004769 "steroid delta-isomerase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0016021 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0006694 GeneTree:ENSGT00550000074557 EMBL:AF232699
RefSeq:NP_001004049.1 UniGene:Ssc.14393 ProteinModelPortal:Q9N119
STRING:Q9N119 Ensembl:ENSSSCT00000007360 Ensembl:ENSSSCT00000033231
Ensembl:ENSSSCT00000036493 GeneID:445539 KEGG:ssc:445539
SABIO-RK:Q9N119 ArrayExpress:Q9N119 Uniprot:Q9N119
Length = 373
Score = 112 (44.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 48/167 (28%), Positives = 76/167 (45%)
Query: 99 GISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEG 158
G S LVTG GF+G + L D + + + + P +++ L + + ++EG
Sbjct: 3 GWSCLVTGGGGFLGQRIVHLLLEEKD-LQEIRVLDKVFKPEVREEFSKLQSKIKLTMLEG 61
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
DI D LK S V+H A+ V A+ + + N+ G LLE C A+
Sbjct: 62 DILDEQCLKGACQGASV--VIHTASIIDVVNAVGR-ETVMKVNVKGTQLLLEACVQASV- 117
Query: 219 PAIVWASSSSVYGLNT--KVPFS--EKDRTDQPASL-YAATKKAGEE 260
P + SS V G N+ +V + E+DR + S Y +KK E+
Sbjct: 118 PVFIHTSSIEVAGPNSYREVIQNACEEDRLETAWSAPYPLSKKLAEK 164
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRWYLSYYAGGKKA 437
AQR+LGY+P + +K W S K+A
Sbjct: 334 AQRDLGYEPLFTWEEAKQKTKAWVGSLVKQHKEA 367
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 110 (43.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 56/220 (25%), Positives = 96/220 (43%)
Query: 123 GDGVLG---LDNFNDY-YDPSLKKARQALLERSGIFIVEGDIND-MALLKKLFDVVSFTH 177
G G LG ++ D Y ++ RQA E G+ +GD+ D +AL+ L +V +
Sbjct: 17 GSGFLGRHLVERLVDRGYTVNVFDIRQAY-ELPGVTFYQGDLCDKLALVMALKEV---SI 72
Query: 178 VMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAIVWASSSSVY-GLNTKV 236
V H A+ A + + NI G ++++ C A Q I+ +S+S V+ G + K
Sbjct: 73 VFHCASPAP---GSDDGALFQRVNIDGTRTVIQACHEAGVQKLILTSSASVVFEGTDIKN 129
Query: 237 PFSEKDRTDQPASLYAATKKAGEEIA-HTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFF 295
+ +P Y TK E++ + G +R ++GP P +
Sbjct: 130 GKEDLPYAKKPIDYYTETKIKQEKLVLEACSKEKGFLTVAIRPHGIFGPRD-PQLVPILV 188
Query: 296 TRDILNRKSIPIFESPDHGTVARDFTYIDDIVKGCLAALD 335
D R + F D G+ DFTY++++V G + A +
Sbjct: 189 --DTARRGKMK-FIIGD-GSNLVDFTYVENVVHGHILAAE 224
Score = 49 (22.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 372 ILERLLKVKAKRNIMKLPRNGDVPFTHANISLAQ--RELGYKPTTDLQTGLKKFVRWY 427
IL L++ K + M++ G TH S A+ +++GY+P LQ + + V Y
Sbjct: 285 ILRPLIQFKPTFSPMRVALAG----THHYYSCARAKQDMGYRPLVPLQEAVVRTVESY 338
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 64/249 (25%), Positives = 108/249 (43%)
Query: 102 VLVTGAAGFVGTHVSAALKRRG-DGVLGLDNF-NDYYDPSLKKARQA-LLERSGIF--IV 156
++VTG AG +G+++ AL RG +L +D+ N +L + A ++R I+
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLVDLQIADYMDRDDFLAQIM 61
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
GD D + D + + +Y M N +Y +S LL C +
Sbjct: 62 AGD--DFGFI----DAIFHEGACSATTEWDGKYVMLN--NYEYSK-----ELLHYCLDR- 107
Query: 217 PQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTY-----NHIYGL 271
+ ++ASS++ YG T F E+ + + ++Y +K+ + H L
Sbjct: 108 -EIPFLYASSAATYG-ETDT-FIEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETL 164
Query: 272 S-LTGLRFFTVYGP--WGRPDMAYF-FFTRDILNRKSIP-IFESPDHGTVARDFTYIDDI 326
S +TG R+F VYGP + MA F + +N P +F ++ RDF Y+ D+
Sbjct: 165 SQITGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSEN--FKRDFVYVGDV 222
Query: 327 VKGCLAALD 335
L LD
Sbjct: 223 AAVNLWFLD 231
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 64/249 (25%), Positives = 108/249 (43%)
Query: 102 VLVTGAAGFVGTHVSAALKRRG-DGVLGLDNF-NDYYDPSLKKARQA-LLERSGIF--IV 156
++VTG AG +G+++ AL RG +L +D+ N +L + A ++R I+
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLVDLQIADYMDRDDFLAQIM 61
Query: 157 EGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNAN 216
GD D + D + + +Y M N +Y +S LL C +
Sbjct: 62 AGD--DFGFI----DAIFHEGACSATTEWDGKYVMLN--NYEYSK-----ELLHYCLDR- 107
Query: 217 PQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTY-----NHIYGL 271
+ ++ASS++ YG T F E+ + + ++Y +K+ + H L
Sbjct: 108 -EIPFLYASSAATYG-ETDT-FIEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETL 164
Query: 272 S-LTGLRFFTVYGP--WGRPDMAYF-FFTRDILNRKSIP-IFESPDHGTVARDFTYIDDI 326
S +TG R+F VYGP + MA F + +N P +F ++ RDF Y+ D+
Sbjct: 165 SQITGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSEN--FKRDFVYVGDV 222
Query: 327 VKGCLAALD 335
L LD
Sbjct: 223 AAVNLWFLD 231
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 83/344 (24%), Positives = 136/344 (39%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K A E + + G
Sbjct: 24 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHTE-GNMKLHYG 82
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + G + LL+ K
Sbjct: 83 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGLGTLRLLDATKTCGLI 142
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
+ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 143 NTVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 200
Query: 275 GLRFFTVYGPWGRPDMAYFFFTRDILNRKSIPI----FESPDHGTV--ARDFTYIDDIVK 328
G+ F P F TR I +R I ES G + RD+ + D V+
Sbjct: 201 GILF-----NHESPRRGANFVTRKI-SRSVAKIHLGQMESFSLGNLDAKRDWGHAKDYVE 254
Query: 329 GCLAALDTAEXXXXXXXXXXXXAQLRVF------NLGNTS--PVPVSDLVSILERLLKVK 380
L T E + +R F ++G T + V K+
Sbjct: 255 AMWLMLQTDEPEDFVISTGEVHS-VREFVEKAFKHIGKTIVWEGKNENEVGRCSETGKIH 313
Query: 381 AKRNIMKLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFV 424
K ++ K R +V F + S A+ +LG+ P +K+ V
Sbjct: 314 VKVDL-KYYRPTEVDFLQGDCSQAKNKLGWTPKVSFDELVKEMV 356
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 57/241 (23%), Positives = 101/241 (41%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFND------YYDPSLKKARQALLERSG 152
L+TG G G++++ L ++ V G+ FN Y DP K + L
Sbjct: 50 LITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTTRIEHLYADPKAHKGGRMKLHY-- 107
Query: 153 IFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVC 212
GD+ D + L K+ ++V T + +LAAQ+ V+ + + G + +L+
Sbjct: 108 -----GDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSEYTAEVDAVGTLRILDAI 162
Query: 213 KNANPQPAIVW--ASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYG 270
+ + + + AS+S +YG + P +E+ P S YA K G I Y Y
Sbjct: 163 RTCGMEKNVRFYQASTSELYGKVVETPQNEQTPF-YPRSPYACAKMYGFWIVINYREAYN 221
Query: 271 L-SLTGLRFFTVYGPWGRPDMAYFFFTRDI--LNRKSIPIFESPDHGTVARDFTYIDDIV 327
+ + G+ F P + TR + + K + FE + + RD+ + D V
Sbjct: 222 MYACNGI-LFNHESPRRGENFVTRKITRSVAKIYHKQMEYFELGNLDS-KRDWGHASDYV 279
Query: 328 K 328
+
Sbjct: 280 E 280
>UNIPROTKB|Q4K8G6 [details] [associations]
symbol:PFL_4375 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0044237
HOGENOM:HOG000218208 RefSeq:YP_261467.1 ProteinModelPortal:Q4K8G6
STRING:Q4K8G6 GeneID:3478498 KEGG:pfl:PFL_4375 PATRIC:19878178
OMA:VFGAPFP ProtClustDB:CLSK2301589
BioCyc:PFLU220664:GIX8-4410-MONOMER Uniprot:Q4K8G6
Length = 324
Score = 116 (45.9 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 53/205 (25%), Positives = 85/205 (41%)
Query: 100 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKA--RQAL--LERSGIFI 155
+++LVTGAAGF+G + AL RG D + A R + L+ + +
Sbjct: 1 MNILVTGAAGFLGRRLIQALLERGSLT---DRHGQLHPIQRITAFDRDPVQGLDDPRVQV 57
Query: 156 VEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNA 215
GDI D +L L D + + HLAA + A + + + N + LLE +
Sbjct: 58 KGGDITDPQVLANLIDA-NTQGIFHLAAVVSSQ-AESDFDLGMRVNFSATQGLLERARQL 115
Query: 216 NPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTG 275
P V SS +V+G + D+ P S Y K + + Y+ +
Sbjct: 116 GTCPKWVMTSSVAVFGGQLPDTVGD-DQVWSPQSSYGTQKAMNDLLLADYSRRGFVDGRS 174
Query: 276 LRFFTVYGPWGRPDMAYFFFTRDIL 300
LR T+ G+P++A F I+
Sbjct: 175 LRMPTIVVRPGKPNLAASSFASGII 199
Score = 40 (19.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 407 ELGYKPTTDLQTGLKKFVRWYL 428
+LG+ D + +++F+R YL
Sbjct: 301 QLGFTADPDFASVIRQFIRDYL 322
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
++TG G G++++ L +G V G+ +FN L + Q E + + G
Sbjct: 25 VITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNTGRIEHLYQNPQTHTE-GNMKLHYG 83
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V T + +L AQ+ V+ + + + + G + LL+ K
Sbjct: 84 DLTDSTCLVKIINQVKPTEIYNLGAQSHVKISFELAEYTANVDGVGTLRLLDAIKTCGLT 143
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S +YG ++P +K+ T P S Y A K I + Y L ++
Sbjct: 144 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 201
Query: 275 GLRF 278
G+ F
Sbjct: 202 GILF 205
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 116 (45.9 bits), Expect = 0.00055, P = 0.00055
Identities = 45/185 (24%), Positives = 87/185 (47%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL-DNFNDYYDPSLKKAR---QALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +++ +K L E+ + + G
Sbjct: 9 LITGITGQDGSYLTEFLISKGYYVHGIIQKIFHHFNTIVKNIYIKIDMLKEKESLTLHYG 68
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGL--VSLLEVCKNAN 216
D+ D + L + V+ T + +L AQ+ V+ + + + Y ++ GL + LL+ ++
Sbjct: 69 DLTDASNLHSIVSKVNPTEIYNLGAQSHVKVSF-DMSEYT-GDVDGLGCLRLLDAIRSCG 126
Query: 217 PQPAIVW--ASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGL-SL 273
+ + + AS+S +YG ++P SE P S YA K+ I Y Y + +
Sbjct: 127 MEKKVKYYQASTSELYGKVQEIPQSETTPF-YPRSPYAVAKQYAYWIVVNYREAYDMYAC 185
Query: 274 TGLRF 278
G+ F
Sbjct: 186 NGILF 190
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 113 (44.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 58/226 (25%), Positives = 96/226 (42%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVEGDIND 162
LVTG GF+G HV L +R + L F+ + P L++ + ++ + ++GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEELKTGPVQ---VTAIQGDVTQ 69
Query: 163 MALLKKLFDVVSFTHVM-HLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQPAI 221
++ V+ HV+ H A V + +P + N+ G +++E C + +
Sbjct: 70 A---HEVAAAVAGAHVVIHTAGLVDV-FGKTSPETIHEVNVQGTQNVIEACVQTGTR-FL 124
Query: 222 VWASSSSVYGLNTK-VPFSE-KDRTDQPA---SLYAATKKAGEEIAHTYNH---IYGLSL 273
++ SS V G N K PF + T A Y +K E++ N + GL L
Sbjct: 125 IYTSSMEVVGPNIKGQPFYRGNENTPYEAVHRHPYPCSKALAEQLVLEANGREVLGGLPL 184
Query: 274 T--GLRFFTVYGPWGRPDMAYFFFTRDILNRKSI-PIFESPDHGTV 316
LR +YG G M F+ L + I S +HG V
Sbjct: 185 VTCALRPTGIYGE-GHQIMRDFYHQGLRLGGRLFRAIPASVEHGRV 229
Score = 43 (20.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 404 AQRELGYKPTTDLQTGLKKFVRW 426
A+R GY+P + + +RW
Sbjct: 338 ARRHFGYEPLFSWEESRTRTIRW 360
>POMBASE|SPAC513.07 [details] [associations]
symbol:SPAC513.07 "flavonol reductase/cinnamoyl-CoA
reductase family" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 PomBase:SPAC513.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GO:GO:0033554 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016491 GO:GO:0044237
OrthoDB:EOG480N5D HOGENOM:HOG000167998 HSSP:Q9UUN9 PIR:T38902
RefSeq:NP_593981.1 ProteinModelPortal:Q9UT59 PRIDE:Q9UT59
EnsemblFungi:SPAC513.07.1 GeneID:2543471 KEGG:spo:SPAC513.07
OMA:YDICTIN NextBio:20804483 Uniprot:Q9UT59
Length = 336
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 50/184 (27%), Positives = 75/184 (40%)
Query: 98 NGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARQALLERSGIFIVE 157
+G VLVTG GF+G HV+ L + G V G + D L + L ++ IV+
Sbjct: 2 SGKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKAD-ELIRLNPGLKDKIEFVIVK 60
Query: 158 GDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANP 217
D++ + V + H+A+ V N + + + G + +LE +
Sbjct: 61 -DVSASNAFDGVLKDVEL--ICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVKS 117
Query: 218 QPAIVWASSSSVYGL------NTKVPFSEKD----------RTDQPASLYAATKKAGEEI 261
IV SS + G N KV ++EKD TD Y A+KK EE
Sbjct: 118 IKRIVITSSFAAVGNFQIDPHNNKV-YTEKDWNPITYEEALTTDNGIVAYCASKKLAEEA 176
Query: 262 AHTY 265
A Y
Sbjct: 177 AREY 180
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 117 (46.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 47/184 (25%), Positives = 83/184 (45%)
Query: 103 LVTGAAGFVGTHVSAALKRRGDGVLGL----DNFNDYYDPSLKKARQALLERSGIFIVEG 158
L+TG G G++++ L +G V G+ +FN L K QA +E + + G
Sbjct: 13 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIE-GNMKLHYG 71
Query: 159 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVCKNANPQ 218
D+ D L K+ + V + +L AQ+ V+ + + G + LL+ K
Sbjct: 72 DLTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 131
Query: 219 PAIVW--ASSSSVYGLNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGL-SLT 274
++ + AS+S ++G ++P +K+ T P S Y A K I + Y L ++
Sbjct: 132 NSVKFYQASTSELFGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 189
Query: 275 GLRF 278
G+ F
Sbjct: 190 GILF 193
Score = 37 (18.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 387 KLPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFV 424
K R +V F + + A+++L +KP +++ V
Sbjct: 308 KYYRPTEVDFLQGDCTKARQKLNWKPRVTFDELVREMV 345
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 439 404 0.00099 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 204
No. of states in DFA: 612 (65 KB)
Total size of DFA: 248 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.99u 0.10s 31.09t Elapsed: 00:00:01
Total cpu time: 31.03u 0.10s 31.13t Elapsed: 00:00:01
Start: Sat May 11 06:47:19 2013 End: Sat May 11 06:47:20 2013
WARNINGS ISSUED: 1