BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013608
(439 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 14/390 (3%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
++I R P + ++ P+T + +G PA + +V+ V AR+A + W+ +S
Sbjct: 10 LFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGA 69
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
R +LR + I E ++ ++ + D+GK +A L +I + + E
Sbjct: 70 HRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDGK 128
Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
+ M K+ V PLGVVG I WNYP + A+ +G V+K SE AS
Sbjct: 129 QKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285
+ C F + VG P +++++TG + G LVS VDKI F GS G +M
Sbjct: 189 VT-CLEFGEV---CNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM 244
Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
+A++ + PVTLELGGK +V +DVD+ V + + ++GQ C+ R VH I
Sbjct: 245 ASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIA 304
Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-G 404
A FV ++ K K++ P +G + +K+ ++ A +GA IL GS
Sbjct: 305 AEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPE 364
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
HL +G Y PT++ +++ +M++ +EE+
Sbjct: 365 HLKKG---YYIEPTIVTDISTSMQIWKEEV 391
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 186/389 (47%), Gaps = 23/389 (5%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
YI + S+ + ++PAT + LG P + AE + A+ A W + K+R
Sbjct: 16 YIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERA 75
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR 171
LR +I + + + I + + GK + +A GEI I W EG+ R
Sbjct: 76 AILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGK-------R 127
Query: 172 SSGRSM----IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
+G ++ +K+ V P+GV AI WN+P I + A+ +G IV+K +E+
Sbjct: 128 VAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAEST 187
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMI 284
+S + + A G P+ ++ V+ G + G + S+ V K+ F GS VGR++
Sbjct: 188 PFSALAMAFLAERA----GVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL 243
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
M ++ T+ +TLELGG FIV DD D+ + A+ + +++GQ C RF+VH +
Sbjct: 244 MAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERV 303
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
Y F ++A V + G +G L +K+++ + DAL KGA ++ G
Sbjct: 304 YDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH 363
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
L G +F PTV+ V M + +EE
Sbjct: 364 ALGHG----FFEPTVLTGVKPDMDVAKEE 388
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 201/408 (49%), Gaps = 28/408 (6%)
Query: 44 QTPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQAR 96
Q P N + IP R R P + ++ PAT + +G PA + +VD V AR
Sbjct: 12 QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 97 KA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCE 153
KA + W ++ QR ++LR + ++E + ++ + S D+GKT+ +++ + + C
Sbjct: 72 KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCF 131
Query: 154 KITWLLSEG--EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211
+ L+E + + P +S K+ V PLGVVG I WNYP +
Sbjct: 132 EYYAGLAEALDSRRMTPVNLNSD----SYKSYVLREPLGVVGLITPWNYPLLMAIWKVAP 187
Query: 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS-- 268
A+ +G ++K SE AS + C I +G P ++++TG E G L S
Sbjct: 188 ALAAGCAAILKPSELASIT-CLELGEI---CREIGLPSGALNILTGLGPEAGGPLASHPH 243
Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV-AQIAVRAALQS 327
VDKI F GS G IM A++ + PV+LELGGK +V DD+D + A+ + +
Sbjct: 244 VDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFAN 303
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
+GQ C+ R V +I + F+ ++ K K++ PL +G + EK+ +
Sbjct: 304 TGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFI 363
Query: 388 NDALDKGAEILARGSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
++A +GA IL G HL +G Y PT+I +VN +M++ +EE+
Sbjct: 364 SNAKSEGATILCGGERPQHLKKG---YYVQPTIITDVNTSMEIWKEEV 408
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 200/408 (49%), Gaps = 28/408 (6%)
Query: 44 QTPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQAR 96
Q P N + IP R R P + ++ PAT + +G PA + +VD V AR
Sbjct: 12 QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 97 KA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCE 153
KA + W ++ QR ++LR + ++E + ++ + S D+GKT+ +++ + + C
Sbjct: 72 KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCF 131
Query: 154 KITWLLSEG--EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211
+ L+E + + P +S K+ V PLGVVG I WNYP +
Sbjct: 132 EYYAGLAEALDSRRMTPVNLNSD----SYKSYVLREPLGVVGLITPWNYPLLMAIWKVAP 187
Query: 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS-- 268
A+ +G ++K SE AS + C I +G P ++++TG E G L S
Sbjct: 188 ALAAGCAAILKPSELASIT-CLELGEI---CREIGLPSGALNILTGLGPEAGGPLASHPH 243
Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV-AQIAVRAALQS 327
VDKI F GS G IM A++ + PV+L LGGK +V DD+D + A+ + +
Sbjct: 244 VDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFAN 303
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
+GQ C+ R V +I + F+ ++ K K++ PL +G + EK+ +
Sbjct: 304 TGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFI 363
Query: 388 NDALDKGAEILARGSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
++A +GA IL G HL +G Y PT+I +VN +M++ +EE+
Sbjct: 364 SNAKSEGATILCGGERPQHLKKG---YYVQPTIITDVNTSMEIWKEEV 408
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 188/393 (47%), Gaps = 17/393 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-----WAKS 105
++I + P ++ PAT +G PA ++ +VD VA A+ A WA +
Sbjct: 10 LFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATA 69
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
S R ++LR + + E + + ++ S D GK + D + +I + EK
Sbjct: 70 SGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPL-DEAAWDIDDVAGCFEYYADLAEKL 128
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
+ M K+ V P+GVVG I WNYP + A+ +G ++K SE
Sbjct: 129 DARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSE 188
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282
AS + C I VG P +++++TG E G L + VDK+ F GS G
Sbjct: 189 LASLT-CLELGEI---CKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
IM A++ + PV+LELGGK +V +DVD+ A+ A+ ++GQ C+ R +H
Sbjct: 245 KIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHE 304
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
I F++++ K +K++ PL +G + EK+ V++A +GA IL GS
Sbjct: 305 SIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGS 364
Query: 403 FG-HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
HL +G + PT+I +V M++ +EE+
Sbjct: 365 RPEHLKKGF---FIEPTIITDVTTNMQIWREEV 394
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 178/374 (47%), Gaps = 21/374 (5%)
Query: 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125
+ PA LG P + E + A +A W + K+R LR ++EHQ
Sbjct: 27 IDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQ 86
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKA 182
+ + + + + GK + +A GEI I W EG++ P +++ R ++ K+
Sbjct: 87 DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ- 144
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GV AI WN+P I A+ +G +V+K + +S + + A+
Sbjct: 145 -----PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAI 196
Query: 243 AAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
A G P + +V+TG A G L S+ V K+ F GS +GR +M +K + V+LEL
Sbjct: 197 RA-GVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ + A+ + +++GQ C A R YV +Y F ++ + + +
Sbjct: 256 GGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKL 315
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G L +G L + K++ + DAL+KGA ++ G H G +F PT+
Sbjct: 316 HIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTI 371
Query: 420 IVNVNHTMKLMQEE 433
+V+V K+ +EE
Sbjct: 372 LVDVPANAKVSKEE 385
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 178/374 (47%), Gaps = 21/374 (5%)
Query: 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125
+ PA LG P + E + A +A W + K+R LR ++EHQ
Sbjct: 27 IDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQ 86
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKA 182
+ + + + + GK + +A GEI I W EG++ P +++ R ++ K+
Sbjct: 87 DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ- 144
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
P+GV AI WN+P I A+ +G +V+K + +S + + A+
Sbjct: 145 -----PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAI 196
Query: 243 AAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
A G P + +V+TG A G L S+ V K+ F GS +GR +M +K + V+LEL
Sbjct: 197 RA-GVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GG FIV DD D+ + A+ + +++GQ C A R YV +Y F ++ + + +
Sbjct: 256 GGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKL 315
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
G L +G L + K++ + DAL+KGA ++ G H G +F PT+
Sbjct: 316 HIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTI 371
Query: 420 IVNVNHTMKLMQEE 433
+V+V K+ +EE
Sbjct: 372 LVDVPANAKVSKEE 385
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 192/395 (48%), Gaps = 21/395 (5%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERV-----AQARKAQKVWAKS 105
++I R P ++ P+T +G PA ++ +VD V A +RK + W+ +
Sbjct: 10 LFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSAA 69
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA--SLGEIMTTCEKITWLLSEGE 163
S R ++LR + I E ++ + ++ S D GK + +A L +++ E L E +
Sbjct: 70 SGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGLAEELD 129
Query: 164 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
K M K+ + P+GVV I WNYPF + A+ +G ++K
Sbjct: 130 SKQKAPI---SLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKP 186
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280
SE AS + C I VG P +++++TG E G +L S VDKI F GS
Sbjct: 187 SELASVT-CLELGEI---CKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSAT 242
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
G IM A++ + PV+LELGGK +V +DVD+ VA+ V ++GQ C+ R V
Sbjct: 243 GSKIMTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIV 302
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
H I FV ++ K +++ PL +G + +K+ N ++ A +GA IL
Sbjct: 303 HESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTG 362
Query: 401 GSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
G HL +G + PT+I +V +M++ +EE+
Sbjct: 363 GRRPEHLKKG---YFVEPTIITDVTTSMQIWREEV 394
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 190/391 (48%), Gaps = 20/391 (5%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
++I + P + ++ PAT +Y+G P + A+VD VA AR A W +
Sbjct: 11 LFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPH 70
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WL 166
+R + +K + E ++L ++ + +TG+ M + + + +K W
Sbjct: 71 ERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWT 130
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
+ S G+S++ ++ P+GVVGAIV+WN P N + A+ +G IV+K +
Sbjct: 131 ETRTGSYGQSIVSRE------PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAE 184
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMI 284
+ + A VG PE ++ V+ G ETG+AL S+ +D F GS VGR +
Sbjct: 185 TPLTA----NALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREV 240
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
R A++ L P TLELGGK A I+ +DVD+ + V + + ++GQ C R R
Sbjct: 241 GRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSR 300
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
Y V+ V V ++ GPP +G L + +++ + +++GA ++ G
Sbjct: 301 YDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGG-- 358
Query: 405 HLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
EG + +F PTV +V++ M + QEEI
Sbjct: 359 -RPEGLDNGFFIQPTVFADVDNKMTIAQEEI 388
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 26/395 (6%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+YI R S + PA + L SR +V+ V A + QKVWA + QR
Sbjct: 9 LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
+ LR + + E + + + + DTGK + + +I+T + + + EGE+
Sbjct: 69 SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 128
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
E S ++ + + PLGVV I +WNYP A+ +GN ++ K SE
Sbjct: 129 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
+ I A G P+ + +V+TG E G+ L ++KI F G G+
Sbjct: 180 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
+M +AS + L VT+ELGGK I+ D D+ A IAV A SSGQ C R ++H
Sbjct: 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIH 295
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
R A F ++V + V+ + G P + G L H E + + + A +L G
Sbjct: 296 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 355
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
+++GA + Y PTV + M +++EEI
Sbjct: 356 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 388
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 26/395 (6%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+YI R S + PA + L SR +V+ V A + QKVWA + QR
Sbjct: 8 LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 67
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
+ LR + + E + + + + DTGK + + +I+T + + + EGE+
Sbjct: 68 SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 127
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
E S ++ + + PLGVV I +WNYP A+ +GN ++ K SE
Sbjct: 128 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 178
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
+ I A G P+ + +V+TG E G+ L ++KI F G G+
Sbjct: 179 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 234
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
+M +AS + L VT+ELGGK I+ D D+ A IAV A SSGQ C R ++H
Sbjct: 235 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIH 294
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
R A F ++V + V+ + G P + G L H E + + + A +L G
Sbjct: 295 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 354
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
+++GA + Y PTV + M +++EEI
Sbjct: 355 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 387
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
SE +++ YEPA+ LG PA+S EVD A A+KAQ W S+ +R +L + +
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
+ +E I I S++ K A + E++ T E I + EG + ++ E G K
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASK 133
Query: 182 AK---VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
K V P+G+V AI +NYP + + + A+ +GN I K S SG ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 295
A A G P + + ITG +E G+ +V +V+ I F GS G+G I + A + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V ++ +
Sbjct: 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREK 307
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
V +++ G P D+ L + ++ ++ L+NDA DKGA L
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATAL 349
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
SE +++ YEPA+ LG PA+S EVD A A+KAQ W S+ +R +L + +
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
+ +E I I S++ K A + E++ T E I + EG + ++ E G K
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASK 133
Query: 182 AK---VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
K V P+G+V AI +NYP + + + A+ +GN I K S SG ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 295
A A G P + + ITG +E G+ +V +V+ I F GS G+G I + A + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPI 247
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V ++ +
Sbjct: 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREK 307
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
V +++ G P D+ L + ++ ++ L+NDA DKGA L
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATAL 349
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 26/395 (6%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+YI R S + PA + L SR +V+ V A + QKVWA + QR
Sbjct: 8 LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 67
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
+ LR + + E + + + + DTGK + + +I+T + + + EGE+
Sbjct: 68 SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 127
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
E S ++ + + PLGVV I +WNYP A+ +GN ++ K SE
Sbjct: 128 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 178
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
+ I A G P+ + +V+TG E G+ L ++KI F G G+
Sbjct: 179 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 234
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
+M +AS + L VT+ LGGK I+ D D+ A IAV A SSGQ C R ++H
Sbjct: 235 KVMASASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIH 294
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
R A F ++V + V+ + G P + G L H E + + + A +L G
Sbjct: 295 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 354
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
+++GA + Y PTV + M +++EEI
Sbjct: 355 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 387
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
SE +++ YEPA+ LG PA+S EVD A A+KAQ W S+ +R +L + +
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
+ +E I I S++ K +++ E++ T E I + EG + ++ E G K
Sbjct: 76 MRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASK 133
Query: 182 AK---VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
K V P+G+V AI +NYP + + + A+ +GN I K S SG ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 295
A A G P + + ITG +E G+ +V +V+ I F GS G+G I + A + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
L LGGKD+ IV +D D+ A+ + A SGQ C +R V + V ++ +
Sbjct: 248 MLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREK 307
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
V +++ G P D+ L + ++ ++ L+NDA DKGA L
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATAL 349
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 26/395 (6%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+YI R S + PA + L SR +V+ V A + QKVWA + QR
Sbjct: 9 LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
+ LR + + E + + + + DTGK + + +I+T + + + EGE+
Sbjct: 69 SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 128
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
E S ++ + + PLGVV I +WNYP A+ +GN ++ K SE
Sbjct: 129 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
+ I A G P+ + +V+TG E G+ L ++KI F G G+
Sbjct: 180 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
+M +AS + L VT+ELGGK I+ D D+ A IAV A SSGQ R ++H
Sbjct: 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIH 295
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
R A F ++V + V+ + G P + G L H E + + + A +L G
Sbjct: 296 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 355
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
+++GA + Y PTV + M +++EEI
Sbjct: 356 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 388
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 183/376 (48%), Gaps = 24/376 (6%)
Query: 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
++ PA+ LG PALS+ EV++ + A+ AQK+W +R L + E
Sbjct: 28 RISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEER 87
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW----LKPEYRSSGRSMIHK 180
+E+I E+ + K A +GE+ T + I E + LK + G S K
Sbjct: 88 KEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSS--KK 144
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
A VE PLGVV AI +NYP + + A+ +GN +V K + S SG ++++A
Sbjct: 145 IALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSG---IKMVEA 201
Query: 241 ALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
LA GAPE ++ V+TG G+ LV +D I F G G I A + PV L
Sbjct: 202 -LADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVL 258
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGGKD IV DD D+ A V A SGQ C +R +V + V+ + ++V+
Sbjct: 259 ELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVE 318
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 417
++ G P D+ + + + +Q L++DAL+ GA +L+ G+ +G P
Sbjct: 319 QLTVGSP-EDDADITPVIDEKSAAFIQGLIDDALENGATLLS----GNKRQG---NLLSP 370
Query: 418 TVIVNVNHTMKLMQEE 433
T++ +V M++ EE
Sbjct: 371 TLLDDVTPAMRVAWEE 386
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 172/343 (50%), Gaps = 15/343 (4%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
SE +++ YEPA+ LG PA+S EVD A A+KAQ W S+ +R +L + +
Sbjct: 16 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
+ +E I I S++ K A + E++ T E I + EG + ++ E G K
Sbjct: 76 MRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASK 133
Query: 182 AK---VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
K V P+G+V AI +NYP + + + A+ +GN I K S SG ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 295
A A G P + + ITG +E G+ +V +V+ I F GS G+G I + A + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
LELGGKD+ IV +D D+ A+ + A SGQ +R V + V ++ +
Sbjct: 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELVEKIREK 307
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
V +++ G P D+ L + ++ ++ L+NDA DKGA L
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATAL 349
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 26/395 (6%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+YI R S + PA + L SR +V+ V A + QKVWA + QR
Sbjct: 9 LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
+ LR + + E + + + + DTGK + + +I+T + + + EGE+
Sbjct: 69 SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 128
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
E S ++ + + PLGVV I +WNYP A+ +GN ++ K SE
Sbjct: 129 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
+ I A G P+ + +V+TG E G+ L ++KI F G G+
Sbjct: 180 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
+M +AS + L VT+ELGGK I+ D D+ A IAV A SSGQ R ++H
Sbjct: 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIH 295
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
R A F ++V + V+ + G P + G L H E + + + A +L G
Sbjct: 296 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 355
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
+++GA + Y PTV + M +++EEI
Sbjct: 356 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 388
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 13/383 (3%)
Query: 56 RGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
R ++ T +EPAT + L EVD+ V A+ A W+K + +R + +
Sbjct: 28 RIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVML 87
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
+ I E ++ I ++ + GKT+ +A +I + I + + G
Sbjct: 88 EAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGG 146
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ + + + PLGV I++WNYPF A+ GN +V K S +G
Sbjct: 147 AFAYTRRE----PLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILA 202
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293
I A G P LV+V+ G AETG L +V K+ F GS G+ +M ++KT+
Sbjct: 203 EIFHEA----GVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVK 258
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
VTLELGGK ++ D ++ + + A+ A + GQ C R +V R+I F+ +V
Sbjct: 259 HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVV 318
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
K K++ G PL + MG L +K+ V A +GA +L G S+ +
Sbjct: 319 KRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKN 378
Query: 414 --YFPPTVIVNVNHTMKLMQEEI 434
+ P V+ N M ++EEI
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEI 401
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 184/393 (46%), Gaps = 17/393 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQA-----RKAQKVWAKS 105
+++ R P ++ P T ++G PA + +VD VA A R + WA++
Sbjct: 27 LFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWARA 86
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
R ++LR + +IE + + ++ + D GK +A+ ++ + + E
Sbjct: 87 PGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAW-DMDDVAGCFEYFADQAEAL 145
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
K + M K + P+GVVG I WNYP + A+ +G V+K SE
Sbjct: 146 DKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSE 205
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGR 282
AS + C I VG P +++++TG A +S+ VDK+ F GS G+
Sbjct: 206 LASVT-CLELADI---CKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGK 261
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
IM +A+ + PVTLELGGK +V DDVD+ + + ++GQ C+ R +H
Sbjct: 262 KIMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHT 321
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG- 401
I F ++ K++ PL +G + EK++ +++A +GA IL G
Sbjct: 322 KIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGV 381
Query: 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
HL +G + PT+I ++ +M++ +EE+
Sbjct: 382 RPAHLEKGF---FIEPTIITDITTSMEIWREEV 411
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 188/392 (47%), Gaps = 26/392 (6%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+YI + T + + + PAT + P + + + A +AQ W +R
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
+LR + I E I + + GK A + E+ T + I ++ +E + + E
Sbjct: 69 ASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYM-AEWARRYEGEI 126
Query: 171 RSSGRS----MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
S R ++ K+A LGV I+ WN+PF I M A+ +GN IVIK SE
Sbjct: 127 IQSDRPGENILLFKRA------LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF 180
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
+ + +I+ +G P + +++ G ET G+ L + V + GS G
Sbjct: 181 TPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEK 236
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
IM A+K +T V LELGGK IV DD D+ + V + + +SGQ C AER YV +
Sbjct: 237 IMATAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARG 401
IY FV+++ + +++V G P A + D MG L E+++ V A+++GA +
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQKVARAVEEGARV---- 351
Query: 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
+FG + Y+PPT++++V M +M EE
Sbjct: 352 AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEE 383
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 188/392 (47%), Gaps = 26/392 (6%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+YI + T + + + PAT + P + + + A +AQ W +R
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
+LR + I E I + + GK A + E+ T + I ++ +E + + E
Sbjct: 69 ASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYM-AEWARRYEGEI 126
Query: 171 RSSGRS----MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
S R ++ K+A LGV I+ WN+PF I M A+ +GN IVIK SE
Sbjct: 127 IQSDRPGENILLFKRA------LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF 180
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
+ + +I+ +G P + +++ G ET G+ L + V + GS G
Sbjct: 181 TPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEK 236
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
IM A+K +T V LELGGK IV DD D+ + V + + +SGQ C AER YV +
Sbjct: 237 IMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARG 401
IY FV+++ + +++V G P A + D MG L E+++ V A+++GA +
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQKVARAVEEGARV---- 351
Query: 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
+FG + Y+PPT++++V M +M EE
Sbjct: 352 AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEE 383
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 187/392 (47%), Gaps = 26/392 (6%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
+YI + T + + + PAT + P + + + A +AQ W +R
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
+LR + I E I + + GK A + E+ T + I ++ +E + + E
Sbjct: 69 ASWLRKISAGIRERATEISALIVEEGGKIQQLAEV-EVAFTADYIDYM-AEWARRYEGEI 126
Query: 171 RSSGRS----MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
S R ++ K+A LGV I+ WN+PF I M A+ +GN IVIK SE
Sbjct: 127 IQSDRPGENILLFKRA------LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF 180
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
+ + +I+ +G P + +++ G ET G+ L + V + GS G
Sbjct: 181 TPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEK 236
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
IM A+K +T V LELGGK IV DD D+ + V + + +SGQ C AER YV +
Sbjct: 237 IMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARG 401
IY FV+++ + +++V G P A + D MG L E+++ V A+++GA +
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQKVARAVEEGARV---- 351
Query: 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
+ G + Y+PPT++++V M +M EE
Sbjct: 352 ALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEE 383
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 166/368 (45%), Gaps = 15/368 (4%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
PAT + + A + A V+ +A A++AQK WA S R + L+ + E + +
Sbjct: 37 PATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALST 96
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
+ + DTGK + + + + + + + L +Y G + K +V PLG
Sbjct: 97 LETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYIPLGGDFAYTK-RV---PLG 152
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
V I +WNYP A+ +GN +V K SEN I+ A G P+
Sbjct: 153 VCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEA----GLPKG 208
Query: 251 LVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 308
L +VI G +TG LV+ D K+ GS GR + A+ L VT+ELGGK IV
Sbjct: 209 LFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268
Query: 309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368
DD D+ A+ SSGQ C+ R +V + A F+ + + +++ G PL
Sbjct: 269 DDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYA 328
Query: 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH--LSEGAVDQYFPPTVIVNVNHT 426
+G L EK+ + + +GA ++ G + EGA Y PTV +V
Sbjct: 329 THLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA---YVQPTVFADVTDD 385
Query: 427 MKLMQEEI 434
M + +EEI
Sbjct: 386 MTIAREEI 393
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 186/390 (47%), Gaps = 26/390 (6%)
Query: 52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
Y+P +S+T + P+T K +G PA +A+ + + A+ AQK WAK + + R+
Sbjct: 21 YVPSN----ESDT-IDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQ 75
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW-----LLSEGEKWL 166
LR I E++ ++ + + GK + A + E+ T I + L EG+ +
Sbjct: 76 NMLRTFANKIRENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGD--I 132
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
P + IHK P GVV I +WN+P + A+ +GN +V+K ++
Sbjct: 133 LPSDNQDEKIYIHKV------PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQE 186
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
+ RI + A G P+ +++VI G G+ L S I GS G+
Sbjct: 187 TPLATTELGRIAKEA----GLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQ 242
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
I + +++ +TPV LELGGK +V DD D+ A+ A+ + GQ C ER YVH
Sbjct: 243 IYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHAS 302
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
+Y F+++ +VK + G P+ MG C + + ++V++A+ +GA + G
Sbjct: 303 VYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKT 362
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
+ ++ PTV+V+V ++ EE
Sbjct: 363 ATVEGFEGGCWYEPTVLVDVKQDNIVVHEE 392
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 173/392 (44%), Gaps = 19/392 (4%)
Query: 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSF 107
I+I + S K + PAT + L + +VD+ V AR+A ++ W
Sbjct: 23 IFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDA 82
Query: 108 KQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167
+R + L L I + L+ + + + GK +A L ++ + + + +K
Sbjct: 83 SERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQG 142
Query: 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
G + +++ P+GV G I+ WN+P + A+ GN +V+K +E
Sbjct: 143 RTIPMDGNFFTYTRSE----PVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQT 198
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMI 284
+ +I+ A G P +V+++ G+ T A +SS VDK+ F GS VG++I
Sbjct: 199 PLTALHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 254
Query: 285 MRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
A K+ L V+LELGGK IV D D+ + + A + GQ C A R +V
Sbjct: 255 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEES 314
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
IY FV + + K G PL G E EK+ +L+ +GA++ G
Sbjct: 315 IYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG- 373
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
G + PTV +V M++ +EEI
Sbjct: 374 ---PWGNKGYFIQPTVFSDVTDDMRIAKEEIF 402
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 177/377 (46%), Gaps = 25/377 (6%)
Query: 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE 123
T ++ PA +G P+LS A + E + + KA WA + K+R LR II
Sbjct: 48 TTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIA 107
Query: 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHK 180
+ + I I + + GK + +A GE++ I W E ++ P ++ R + +
Sbjct: 108 NADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIR 166
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
P+GV AI WN+P I A+ +G ++++ ++ + + +
Sbjct: 167 ------QPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEK 220
Query: 241 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
A G P ++ ++TG A E G L S +V K+ F GS VGR++M + T+ ++L
Sbjct: 221 A----GIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISL 276
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
ELGG FIV DD D+ A+ + +++GQ C A R YV R +Y F ++A VK
Sbjct: 277 ELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVK 336
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFP 416
+ G +G + + K++ + DA+ KGA+++ G G L +F
Sbjct: 337 ELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGL-------FFE 389
Query: 417 PTVIVNVNHTMKLMQEE 433
P ++ V M + +EE
Sbjct: 390 PGILTGVTSDMLVAKEE 406
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 31/345 (8%)
Query: 102 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161
W + S K+R LR +I++++ + I + ++GK + +A GEI+ + + L
Sbjct: 64 WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYS----AFFL-- 116
Query: 162 GEKWLKPEYRSSGRSMIHKKAK-----VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG 216
+W E R +IH AK V P+GV I WN+P I + AA+ +G
Sbjct: 117 --EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG 174
Query: 217 NGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVI----TGFAETGEALVSS--V 269
+V+K +E+ +S + A LA+ G P + +VI E GEA+ + V
Sbjct: 175 CTVVVKPAEDTPFSA-----LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLV 229
Query: 270 DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329
KI F GS G++++ +A+ ++ V++ELGG FIV D +V A+ + +++G
Sbjct: 230 SKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTG 289
Query: 330 QNCAGAERFYVHRDIYALFVSQVAKIV-KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388
Q C + +F V R I+ FV A+ + K++ G G L + EK++ VN
Sbjct: 290 QTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349
Query: 389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
DA+ KGA ++ G L + +F PT++ NV M EE
Sbjct: 350 DAVSKGATVVTGGKRHQLGK----NFFEPTLLCNVTQDMLCTHEE 390
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 157/350 (44%), Gaps = 17/350 (4%)
Query: 86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
+++ E V +AR A + R Q L L + I E ++ + + D K +A
Sbjct: 18 SKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYY 77
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
E++ E+I +++ + +W E + + PLGVV I +WNYPF+
Sbjct: 78 EEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEA 264
PM+ A+ +GN +V+K SE + II L ++L VI G ET E
Sbjct: 138 IQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD-----KDLYPVINGGVPETTEL 192
Query: 265 LVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 324
L D I++ GS GVG++IM A+K LTPVTLELGGK V + D+ +
Sbjct: 193 LKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252
Query: 325 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384
+SGQ C + I V ++ K +K G D G + H +++
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVM 311
Query: 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
L+ + +A G G A +Y PT++ +V+ +MQEEI
Sbjct: 312 GLIE------GQKVAYGGTGD----AATRYIAPTILTDVDPQSPVMQEEI 351
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 167/363 (46%), Gaps = 27/363 (7%)
Query: 84 SRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141
++ + + + AR+A W++ + + R + +R + I EH+E + + + DTGKT+
Sbjct: 68 TKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLE 127
Query: 142 D--ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK-----KAKVEFHPLGVVGA 194
+ A + +I L + G MI ++K+ P+GVV
Sbjct: 128 ESYADMDDIHNVFMYFAGLADK-----------DGGEMIDSPIPDTESKIVKEPVGVVTQ 176
Query: 195 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 254
I WNYP + A+ +G +V+K SE + F +++ VG P+ +++
Sbjct: 177 ITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEE----VGFPKGTINL 232
Query: 255 ITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 311
I G +E G+ + VD + F G G+ IM+NA+ +T + LELGGK+ I+ DD
Sbjct: 233 ILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA 292
Query: 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371
D A+ +GQ C+ R V I F + VK + G +M
Sbjct: 293 DFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEM 352
Query: 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 431
G + EH K+++ ++ A +GA I G + +F PTVI N + +M+++Q
Sbjct: 353 GPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQ 412
Query: 432 EEI 434
EE+
Sbjct: 413 EEV 415
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 17/348 (4%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
+ + V +AR+A S + R Q L L + I E+ + I + D GK + E
Sbjct: 3 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 62
Query: 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207
+ E++ + E W + E + R + PLGVV I +WNYPF+
Sbjct: 63 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 122
Query: 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT-GFAETGEALV 266
PM+ AV +GN +++K SE + + + A L +NL V+ G ET E L
Sbjct: 123 PMVGAVAAGNAVILKPSEVSG-----HMADLLATLIPQYMDQNLYLVVKGGVPETTELLK 177
Query: 267 SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 326
D I++ GS VG+++M A+K LTPVTLELGGK V D D+ +
Sbjct: 178 ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 237
Query: 327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
+SGQ C + I V ++ K +K G D G + H ++++ L
Sbjct: 238 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGL 296
Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
+++ ++ G++ S +Y PT++V+V+ +MQEEI
Sbjct: 297 IDN-----QKVAHGGTWDQSS-----RYIAPTILVDVDPQSPVMQEEI 334
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 168/374 (44%), Gaps = 23/374 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
P+T + + + +VD+ V AR A ++ W + R + L L I +
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + D GK V + L ++ + + + +K+ G + +
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTL+LGGK
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
I+ D D+ + A A + GQ+C+ R +V DIY FV + KS G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
+V M + +EEI
Sbjct: 388 DVQDGMTIAKEEIF 401
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
P+T + + + +VD+ V AR A ++ W + R + L L I +
Sbjct: 36 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 95
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + D GK V + L ++ + + + +K+ G + +
Sbjct: 96 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 151
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 152 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 207
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 208 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 267
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 268 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 327
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 328 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 381
Query: 422 NVNHTMKLMQEEII 435
+V M + +EEI
Sbjct: 382 DVQDGMTIAKEEIF 395
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 167/345 (48%), Gaps = 31/345 (8%)
Query: 102 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161
W + S K+R LR +I++++ + I + ++GK + +A GEI+ + + L
Sbjct: 64 WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYS----AFFL-- 116
Query: 162 GEKWLKPEYRSSGRSMIHKKAK-----VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG 216
+W E R +IH AK V P+GV I WN+P I + AA+ +G
Sbjct: 117 --EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG 174
Query: 217 NGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVI----TGFAETGEALVSS--V 269
+V+K +E+ +S + A LA+ G P + +VI E GEA+ + V
Sbjct: 175 CTVVVKPAEDTPFSA-----LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLV 229
Query: 270 DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329
KI F GS G++++ +A+ ++ V++ELGG FIV D +V A+ + +++G
Sbjct: 230 SKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTG 289
Query: 330 QNCAGAERFYVHRDIYALFVSQVAKIV-KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388
Q + +F V R I+ FV A+ + K++ G G L + EK++ VN
Sbjct: 290 QTAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349
Query: 389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
DA+ KGA ++ G L + +F PT++ NV M EE
Sbjct: 350 DAVSKGATVVTGGKRHQLGK----NFFEPTLLCNVTQDMLCTHEE 390
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
P+T + + + +VD+ V AR A ++ W + R + L L I +
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + D GK V + L ++ + + + +K+ G + +
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
+V M + +EEI
Sbjct: 388 DVQDGMTIAKEEIF 401
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
P+T + + + +VD+ V AR A ++ W + R + L L I +
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + D GK V + L ++ + + + +K+ G + +
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
+V M + +EEI
Sbjct: 388 DVQDGMTIAKEEIF 401
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
P+T + + + +VD+ V AR A ++ W + R + L L I +
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + D GK V + L ++ + + + +K+ G + +
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
+V M + +EEI
Sbjct: 388 DVQDGMTIAKEEIF 401
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
P+T + + + +VD+ V AR A ++ W + R + L L I +
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + D GK V + L ++ + + + +K+ G + +
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
+V M + +EEI
Sbjct: 388 DVQDGMTIAKEEIF 401
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 177/380 (46%), Gaps = 17/380 (4%)
Query: 60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
P + + +P+T + S + D+ + A+KA + W +S +R F+ +L+
Sbjct: 37 PSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILE 96
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH 179
+ + + S + G + A + T I + +++ E G +
Sbjct: 97 IYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEG----N 152
Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII- 238
++A + + +GVVG I WN+P + + ++ A+ +G +V+K SE A S + I+
Sbjct: 153 EQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILD 212
Query: 239 QAALAAVGAPENLVDVITG-FAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPV 295
+AAL P + ++I G A G L + D I F GS G+ I +NAS TL V
Sbjct: 213 EAAL-----PSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRV 267
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
LELGGK A I+ D D+ + Q VR +SGQ+C R V + IY + I
Sbjct: 268 CLELGGKGANIIFADADIDAL-QRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDI 326
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
+ GP +G + E +K+Q+L+ +D+GA ++ G+ L G Y+
Sbjct: 327 AEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGT--GLPMGMERGYY 384
Query: 416 -PPTVIVNVNHTMKLMQEEI 434
PTV +V M++ +EEI
Sbjct: 385 VRPTVFADVKPHMRIFREEI 404
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 167/373 (44%), Gaps = 16/373 (4%)
Query: 70 EPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129
+PAT + LG EVD A +A + W+++ K+R+++L + + I +H + +
Sbjct: 48 DPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELA 107
Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL 189
+ D G+ + ++ E + E ++ R ++ +V P
Sbjct: 108 VMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRV---PA 163
Query: 190 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249
G VG I WN P + A+ GN +V+K +E + ++ I++ A P
Sbjct: 164 GPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEA----DLPP 219
Query: 250 NLVDVITGFAE-TGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
+ +++ GF E G ALV+ V + G G+++MRNA+ L ++ ELGGK +
Sbjct: 220 GVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPAL 279
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
V D D+ V +G+ C + R V I+ FV +V + +++ G PL
Sbjct: 280 VFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLD 339
Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD----QYFPPTVIVN 422
+ ++G L EH +++ V +GA +L G S D Y PTV V
Sbjct: 340 PETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG 399
Query: 423 VNHTMKLMQEEII 435
NH MK+ QEEI
Sbjct: 400 ENH-MKIAQEEIF 411
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 165/379 (43%), Gaps = 17/379 (4%)
Query: 59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
T + T+ PAT + L P + E++ ++ A K W +S QR Q LR +
Sbjct: 2 TXXTATQALSVNPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIG 61
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ + H E + +R+ GK + A E+ + W G L PE +++
Sbjct: 62 QALRAHAEEXAQCITREXGKPIKQAR-AEVTKSAALCDWYAEHGPAXLNPE-----PTLV 115
Query: 179 -HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 237
+++A +E+ PLGV+ AI WN+P + + + +GN ++K + N + GC +
Sbjct: 116 ENQQAVIEYRPLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVT--GCA--QX 171
Query: 238 IQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
I LA G P + + E ++ + + GS G I A L
Sbjct: 172 IARILAEAGTPAGVYGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKC 231
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
LELGG D FIV +D D+ + AV Q++GQ CA A+RF V I F +
Sbjct: 232 VLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAA 291
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
++ G PL + D+G + ++L V ++ +GA +L G Y+
Sbjct: 292 AAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEGARLL----LGGEKIAGEGNYY 347
Query: 416 PPTVIVNVNHTMKLMQEEI 434
TV+ +V ++E+
Sbjct: 348 AATVLADVTPDXTAFRQEL 366
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 177/404 (43%), Gaps = 25/404 (6%)
Query: 43 NQTPDNSF--IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK 100
NQ P+ + I+I S+ P+T + + +A+VD V AR A +
Sbjct: 11 NQQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQ 70
Query: 101 V---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW 157
+ W + +R + L L I + + + + D GK + + L ++ + + +
Sbjct: 71 LGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRY 130
Query: 158 LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGN 217
+K+ G + + P+GV G I+ WN+P + A+ +GN
Sbjct: 131 YAGWADKYHGKTIPIDGDYFSYTR----HEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 186
Query: 218 GIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS---VDKIIF 274
+V+KV+E + + +I+ A G P +V+VI GF T A ++S VDK+ F
Sbjct: 187 VVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNVIPGFGPTAGAAIASHEDVDKVAF 242
Query: 275 VGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCA 333
GS VG +I A K+ L VTLE+GGK I+ D D+ + A A + GQ C
Sbjct: 243 TGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 302
Query: 334 GAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 393
R +V DIYA FV + KS G P + + G +K+ + ++
Sbjct: 303 AGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEE 362
Query: 394 GAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEII 435
G ++L G A D+ + PTV ++ M + +EEI
Sbjct: 363 GLKLLCGGG------AAADRGYFIQPTVFGDLQDGMTIAKEEIF 400
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 163/373 (43%), Gaps = 19/373 (5%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQ 125
+ PAT + + + +VD+ V AR+A ++ W +R Q + L I +
Sbjct: 41 FNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDR 100
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE 185
L+ + S + GK A L ++ + + + +K G + +
Sbjct: 101 LLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTR---- 156
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
P+GV G I WN P + + A+ GN +++K +E + +I+ A
Sbjct: 157 HEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEA---- 212
Query: 246 GAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGG 301
G P +V+++ G+ T A +SS VDK+ F GS VG+MI A+K+ L VTLELG
Sbjct: 213 GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGA 272
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
K+ IV D D+ + A + + GQ+C A + +V IY FV + + K
Sbjct: 273 KNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVF 332
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
G PL + G K+ L+ +GA++ G G + PTV
Sbjct: 333 GNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGG----PWGNKGYFIQPTVFS 388
Query: 422 NVNHTMKLMQEEI 434
NV M++ +EEI
Sbjct: 389 NVTDDMRIAKEEI 401
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 20/379 (5%)
Query: 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
S ++ PAT + +G ++A+VD+ V A + +S K+R+ L ++K
Sbjct: 20 NSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKE 79
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIH 179
++ I + + + G + SL E + + ++ + E+ G ++
Sbjct: 80 YENRKDDIVQAITDELGAPL---SLSERVHYQXGLNHFVAARDALDNYEFEERRGDDLVV 136
Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
K+A +GV G I WN+P + + AA +G+ +V+K SE ++ I+
Sbjct: 137 KEA------IGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV----ILA 186
Query: 240 AALAAVGAPENLVDVITG-FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 296
VG P+ + +++ G A G L V F GS G I A+K V+
Sbjct: 187 EIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDFKKVS 246
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
LELGGK +IV DDVD+ A+ + ++GQ C R V I F++++ +
Sbjct: 247 LELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQF 306
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
V G P +G + + +++QN +N +++GAE+ G EG YF
Sbjct: 307 SQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGP--GKPEGLEKGYFA 364
Query: 417 -PTVIVNVNHTMKLMQEEI 434
PT+ +NV++ + QEEI
Sbjct: 365 RPTIFINVDNQXTIAQEEI 383
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 170/375 (45%), Gaps = 25/375 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
P+T + + + +VD+ V AR A ++ W + R + L L I +
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + D GK V + L ++ + + + +K+ G + +
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
I+ D D+ + A A + GQ +CAG+ R +V DIY FV + KS G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 420
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 421 VNVNHTMKLMQEEII 435
+V M + +EEI
Sbjct: 387 GDVQDGMTIAKEEIF 401
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 170/375 (45%), Gaps = 25/375 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
P+T + + + +VD+ V AR A ++ W + R + L L I +
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + D GK V + L ++ + + + +K+ G + +
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
I+ D D+ + A A + GQ +CAG+ R +V DIY FV + KS G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 420
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 421 VNVNHTMKLMQEEII 435
+V M + +EEI
Sbjct: 387 GDVQDGMTIAKEEIF 401
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 7/284 (2%)
Query: 75 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 134
K++ Y LS A++D + + A + R+Q L L + +I ++E + +
Sbjct: 20 KHMNY---LSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAE 76
Query: 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 194
D GK L EI +I + L+ ++W+ P S + + V P GV
Sbjct: 77 DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYI 136
Query: 195 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 254
I +NYP + P++ A+ GN +IK SE + +II A A PE + +
Sbjct: 137 IGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA----PEYVAVI 192
Query: 255 ITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 314
G E L D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+
Sbjct: 193 QGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLD 252
Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
+ +SGQ C + YVH + + ++ + VK+
Sbjct: 253 QTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLERLVERVKT 296
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 169/375 (45%), Gaps = 25/375 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
P+T + + + +VD+ V AR A ++ W + R + L L I +
Sbjct: 42 PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
+ + + D GK V + L ++ + + + +K+ G + +
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
I+ D D+ + A A + GQ CAG+ R +V DIY FV + KS G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCXCAGS-RTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 420
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 421 VNVNHTMKLMQEEII 435
+V M + +EEI
Sbjct: 387 GDVQDGMTIAKEEIF 401
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 176/421 (41%), Gaps = 32/421 (7%)
Query: 21 LMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYF 80
L L+P P++++ + I+I + +S PAT + +
Sbjct: 4 LQLLPSPTPNLEIKYTK-------------IFINNEWQNSESGRVFPVCNPATGEQVCEV 50
Query: 81 PALSRAEVDERVAQARKA---QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG 137
+ ++D+ V AR A VW + +R + L L + + + + S + G
Sbjct: 51 QEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGG 110
Query: 138 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
K + A ++ + + + +K G + P+GV G I+
Sbjct: 111 KPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTR----HEPIGVCGQIIP 166
Query: 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257
WN+P + A+ GN +VIK +E S + +I+ A G P +V+++ G
Sbjct: 167 WNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEA----GFPPGVVNILPG 222
Query: 258 FAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDV 313
+ T A ++S +DKI F GS VG++I A ++ L VTLELGGK I+ D D+
Sbjct: 223 YGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADL 282
Query: 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373
+ + A + + GQ C R +V IY FV + + K G P + G
Sbjct: 283 DYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGP 342
Query: 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
+ K+ L+ + +GA++ G G + PTV NV M++ +EE
Sbjct: 343 QIDKKQYNKILELIQSGVAEGAKLECGGK----GLGRKGFFIEPTVFSNVTDDMRIAKEE 398
Query: 434 I 434
I
Sbjct: 399 I 399
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 155/352 (44%), Gaps = 27/352 (7%)
Query: 90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIM 149
++ +AR+AQ W + + R L+ + I+ +E + E DTG+ +
Sbjct: 32 QQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSI-------- 83
Query: 150 TTCEKITWLLSEGEKW--LKPEY---RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204
T +I L+ ++W L PE + S+ + P +VG I WN+P
Sbjct: 84 -TVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTL 142
Query: 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV---ITGFAET 261
+ A+ +G +V+K SE A R + L A+ L DV + G ET
Sbjct: 143 SXIDTIPALLAGCAVVVKPSEIAP-------RFVAPLLXALNTVPELRDVLIFVEGGGET 195
Query: 262 GEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 321
G L++ VD + F GS GR + A++ P LELGGKD IV + ++ +
Sbjct: 196 GANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAIL 255
Query: 322 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381
A+ ++GQ+C ER YV + F Q+ + PL +G + + +
Sbjct: 256 WGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAG 315
Query: 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
+ + + DA++KGA I G L G + PTV NVNH+ K+ EE
Sbjct: 316 IINDHILDAVEKGAVIHCGGKVEELGGG---WWCRPTVXTNVNHSXKVXTEE 364
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 23/341 (6%)
Query: 71 PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
P +++ + PALSR E E + A K ++V +R L + K I E +E + +
Sbjct: 19 PYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78
Query: 131 ISSRDTGKTM------VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
I + D GK + V+ S+G T + + + E + P S R + ++
Sbjct: 79 ILAIDAGKPIKQARVEVERSIG----TFKLAAFYVKEHRDEVIP---SDDRLIFTRR--- 128
Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
P+G+VGAI +N+P + + + A+ +GN IV S A +II+ AL
Sbjct: 129 --EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKK 186
Query: 245 VGAPENLVDVITGFAET-GEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
P + +++TG E G+ +V V+ I F GS VG +I + A + LELGG
Sbjct: 187 YNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGG 244
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
+ IV D D+ ++ + +GQ C V I F+ K ++
Sbjct: 245 VNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNV 304
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
G PL K D+G L +EH+E ++ +V A+D+G ++L G
Sbjct: 305 GNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK 345
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 7/284 (2%)
Query: 75 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 134
K++ Y LS A++D + + A + R+Q L L + +I ++E + +
Sbjct: 20 KHMNY---LSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAE 76
Query: 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 194
D GK L EI +I + L+ ++W+ P S + + V P GV
Sbjct: 77 DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYI 136
Query: 195 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 254
I +NYP + P++ A+ GN +IK SE + +II A A PE + +
Sbjct: 137 IGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA----PEYVAVI 192
Query: 255 ITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 314
G E L D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+
Sbjct: 193 QGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLD 252
Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
+ +SGQ + YVH + + ++ + VK+
Sbjct: 253 QTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKT 296
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 155/345 (44%), Gaps = 20/345 (5%)
Query: 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
A+KAQK WAKS+ + R+ L+ Y+ E+++ I + +R+TG T++ +++ E+
Sbjct: 53 AQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-----ELEQ 107
Query: 155 ITWLLSEGEKWLKP--EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAA 212
+L E + + + K K+ PLGV+ +I +N+P + + A
Sbjct: 108 TIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPA 167
Query: 213 VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV-ITGFAETGEALVSS-VD 270
+ GN +V K + SG II A G P +++V +T E G+ ++++ +
Sbjct: 168 IALGNSVVHKPDIQTAISGG---TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIP 224
Query: 271 KII-FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329
++I F GS VGR I A + + LELGG + F V D DV A+ G
Sbjct: 225 RLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQG 284
Query: 330 QNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389
Q C R VH+D+Y FV + VK + G K +G L EK ++
Sbjct: 285 QICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQ 344
Query: 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
A G E+ G V P V V ++ K+ Q E+
Sbjct: 345 AKTDGIELAVEGK-------RVGNVLTPYVFVGADNNSKIAQTEL 382
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 34/364 (9%)
Query: 86 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
+EE
Sbjct: 416 AKEE 419
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 166/364 (45%), Gaps = 34/364 (9%)
Query: 86 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
++ G G+ L D KI F GS VG+ IM++ A + V+L+LGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
+EE
Sbjct: 416 AKEE 419
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 167/377 (44%), Gaps = 23/377 (6%)
Query: 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE 123
+K Q P T + + + ++DE + A K W R + L + + E
Sbjct: 4 SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKE 63
Query: 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWLLSEGEKWLKPEYRSS--GRSMIHK 180
H++ + + + + GK + ++ E + C I + G + LKP +S G + K
Sbjct: 64 HEDELAKXXTLEXGKLLSESK--EEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLK 121
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
++ GV+ A WN+P + + GN I++K + N S +II+
Sbjct: 122 QS------TGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKR 175
Query: 241 ALAAVGAPE-NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
A GAPE +L+++ + + + + + + GS G + A K L T E
Sbjct: 176 A----GAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXE 231
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGG DAFIV DD D + + A + GQ C ++R V + Y + ++ + +
Sbjct: 232 LGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSN 291
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL-SEGAVDQYFPP 417
+ AG PL + + EKL+ V +A+D GA++ + + + S+GA +F P
Sbjct: 292 LKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQ--YPEIDSKGA---FFRP 346
Query: 418 TVIVNVNHTMKLMQEEI 434
T++ ++ + +E+
Sbjct: 347 TILTDIAKDNPVFDKEV 363
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 34/364 (9%)
Query: 86 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
++ G G+ L D KI F GS VG+ IM++ A + V+L LGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
+EE
Sbjct: 416 AKEE 419
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 34/364 (9%)
Query: 86 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
+EE
Sbjct: 416 AKEE 419
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 34/364 (9%)
Query: 86 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
+EE
Sbjct: 416 AKEE 419
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 171/396 (43%), Gaps = 26/396 (6%)
Query: 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSS 106
+N YI R + Y PAT + P+ +V V + A ++
Sbjct: 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWP 69
Query: 107 FKQRRQFLRILLKYIIEHQELICEISSRDTGKTM------VDASLGEIMTTCEKITWLLS 160
+ RR++L + + E++E I I + GK VD + G + I+ L S
Sbjct: 70 IETRRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDS 129
Query: 161 EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220
PE +H + P+GV G IV WN+P I + AA+ +G V
Sbjct: 130 H----TIPEKPKDCTWTVH------YRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSV 179
Query: 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSSVD--KIIFVGS 277
IK + + +F + + P+ V+++ G A G+ L D + F GS
Sbjct: 180 IKPASETPLTXIAFFSVXDK----LDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGS 235
Query: 278 PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 337
VGR ++ + ++ + + LELGG FIV DD D+ A + + GQ C A R
Sbjct: 236 TEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANR 295
Query: 338 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 397
+VH + F ++A+ V + G D+G L + +K++ + DALDKGA +
Sbjct: 296 IFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASL 355
Query: 398 LARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
+A L +G +FPPTV+ V+ QEE
Sbjct: 356 VAGKQPAELGDGL---FFPPTVVQGVDREXCCYQEE 388
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 164/364 (45%), Gaps = 34/364 (9%)
Query: 86 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
++ G G+ L D KI F GS VG+ IM++ A + V+L LGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
+EE
Sbjct: 416 AKEE 419
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 160/376 (42%), Gaps = 20/376 (5%)
Query: 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
K Y PAT L S +VD V A A W +++ K R + L L I E+
Sbjct: 39 KQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEEN 98
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGE---KWLKPEYRSSGRSMIHKK 181
++ E+ SR+ GK + A EI + + EY SMI +
Sbjct: 99 GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRD 158
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
PLGVV +I WNYP + A+ +GN +V+K SE + + A
Sbjct: 159 ------PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA-----LKLAE 207
Query: 242 LAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
LA P +V+++ G +T G+ L V + GS G I+ + + ++ +E
Sbjct: 208 LAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHME 267
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV DD D+ V + ++GQ+C A R Y + IY V ++ V +
Sbjct: 268 LGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVAT 327
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
+ +G P ++G L L H E++ V +A G + G G Y+ PT
Sbjct: 328 LKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG---YYYAPT 384
Query: 419 VIVNVNHTMKLMQEEI 434
++ ++Q+E+
Sbjct: 385 LLAGALQDDAIVQKEV 400
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 150/336 (44%), Gaps = 14/336 (4%)
Query: 102 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161
W + S +R + + I+ QE + I S + GK + A GEI + ++ +
Sbjct: 79 WPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQ 137
Query: 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221
+ + G + V P+GVVG I WN+PF + A+ SG +V+
Sbjct: 138 ARALEGQTHNNIGDDRL---GLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVL 194
Query: 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSP 278
K SE S + R+ + A A G P+ + +V+TG+ + G+ L +VD + F GS
Sbjct: 195 KPSEFTSGT---SIRLAELAREA-GIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSV 250
Query: 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338
VG + A++T+ V LELGGK IV D D+ A ++GQ C R
Sbjct: 251 RVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRL 310
Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
V I ++ I + V+ G PL + +GA H+EK+ + V + GAE+L
Sbjct: 311 LVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELL 370
Query: 399 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
G G Y+ PTV V + +EEI
Sbjct: 371 LGGERIGREAGL---YYAPTVFAGVTPDXSIAREEI 403
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 159/377 (42%), Gaps = 16/377 (4%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
+E + P T + S A++D V A +A W++++ +R L + I
Sbjct: 38 TEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAI 97
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
+ + + + + GK + E+ + + P ++G +
Sbjct: 98 EKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP---AAGEYLPGHT 154
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
+ + P+G+VG+I WNYP + A+ GN +V K SE + R+I
Sbjct: 155 SXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI 214
Query: 242 LAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
L PE +V+VITG ET G AL++ V + G G+ ++ A+KT+ LE
Sbjct: 215 L-----PEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAAAKTVKRTHLE 269
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
LGGK IV D D+ V ++GQ+C A R Y IY V+ + V +
Sbjct: 270 LGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVST 329
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPP 417
+ + ++G L +++ + V A D K EI G G EG +F P
Sbjct: 330 IRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS-DEGF---FFQP 385
Query: 418 TVIVNVNHTMKLMQEEI 434
TV+ ++++ E+
Sbjct: 386 TVVAGATQEDEIVRREV 402
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 166/394 (42%), Gaps = 17/394 (4%)
Query: 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSS 106
DN +Y G S + Y PA + + + AE +E V + R+A K+WA
Sbjct: 21 DNPGVY---NGSWGGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKMWADIP 77
Query: 107 FKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA--SLGEIMTTCEKITWLLSEGEK 164
+R + +R + + + +++ + S + GK V+ + E + C+ L
Sbjct: 78 APKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQEYVDVCDYAVGLSRMIGG 137
Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224
+ P R G ++I +++P+G+VG I ++N+P A+ GN + K +
Sbjct: 138 PVLPSERP-GHALIE-----QWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGA 191
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGR 282
+ +I+ L P + + G A+ G A+ VD + F GS VG+
Sbjct: 192 PTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGK 251
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
M+ + LELGG +A IV +D D+ V AV A++ ++GQ C R +H
Sbjct: 252 MVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHE 311
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
++ V ++AK K V G P G L + ++ + A +G ++ G
Sbjct: 312 SVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGK 371
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIIL 436
Y PT+I + H ++ E +
Sbjct: 372 VMDRP----GNYVEPTIITGLAHDAPIVHTETFV 401
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 14/372 (3%)
Query: 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125
+ Y PA + + S A+ +E V +AR+A K+WA +R + +R + + E
Sbjct: 39 ITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKI 98
Query: 126 ELICEISSRDTGKTMVDA--SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK 183
+++ + S + GK +V+ + E + C+ L + P RS G ++I
Sbjct: 99 QVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERS-GHALIE---- 153
Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
+++P+G+VG I ++N+P A+ GN + K + S +II L
Sbjct: 154 -QWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLE 212
Query: 244 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
P + + G A+ G A+ V+ + F GS VG+ + + LELGG
Sbjct: 213 DNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGG 272
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
+A I +D D+ V A+ AA+ ++GQ C A R ++H I+ V+++ K +
Sbjct: 273 NNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRV 332
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
G P G L + V +A +G ++ +G Y PT++
Sbjct: 333 GNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV----YGGKVMDRPGNYVEPTIVT 388
Query: 422 NVNHTMKLMQEE 433
+ H + E
Sbjct: 389 GLGHDASIAHTE 400
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 167/389 (42%), Gaps = 23/389 (5%)
Query: 57 GRTPQSETKVQCYEPATMK-YLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
G ++E K+ PA + +G ++ ++ + A KA + W + ++R L
Sbjct: 44 GERYETENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDPEERAAVLF 103
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
+ + + + ++ GK +A T E I ++ + ++
Sbjct: 104 RAVAKVRRKKHEFSALLVKEAGKPWNEAD----ADTAEAIDFMEYYARQMIELAKGKPVN 159
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
S ++ + + P GV I WN+ F + +A + +GN +V+K + A +
Sbjct: 160 SREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFV 219
Query: 236 RIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT- 291
+++ + G P+ +V+ + G AE G+ LV I F GS VG I A+K
Sbjct: 220 EVLEES----GLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQ 275
Query: 292 -----LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA 346
L V E+GGKD +V +D D+ AQ +A +GQ C+ R VH +Y
Sbjct: 276 PGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYD 335
Query: 347 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 406
+ +V +I +S G P + MG + K+ + + ++G L G G
Sbjct: 336 EVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGR--LVSGGKGDD 393
Query: 407 SEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
S+G + PT+ +++ +LMQEEI
Sbjct: 394 SKG---YFIEPTIFADLDPKARLMQEEIF 419
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 168/390 (43%), Gaps = 27/390 (6%)
Query: 57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVD---ERVAQARKAQKVWAKSSFKQRRQF 113
G +E K+Q + PA L ++S+A D + + A +A + W + ++R
Sbjct: 44 GERVTTEDKIQSWNPARKDQL--VGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANI 101
Query: 114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS 173
L I + + GK +A T E I +L + ++
Sbjct: 102 LVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD----ADTAEAIDFLEYYARQMIELNRGKE 157
Query: 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233
S ++ + + P+GV I WN+ + +A + +GN +V+K +
Sbjct: 158 ILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217
Query: 234 YFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG-RM-----I 284
+ +++ A G P+ +++ + G AE G+ LV I F GS VG R+ +
Sbjct: 218 FVEVLEDA----GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV 273
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
+R L V +E+GGKD +V D D+ A+ + +A SGQ C+ R +H+D+
Sbjct: 274 VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDV 333
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
Y + + + K+++ G P MG + + EK+ + + +G L G G
Sbjct: 334 YDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGR--LMTGGEG 391
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
S G + PT+I +++ +MQEEI
Sbjct: 392 DSSTGF---FIQPTIIADLDPEAVIMQEEI 418
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 168/383 (43%), Gaps = 27/383 (7%)
Query: 63 ETKVQCYE----PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
E+K YE PAT + L P ++ ++D A +A K W+K + +R + L
Sbjct: 16 ESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQ 75
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
+ + +H+E + + + + GK +A LGE+ E + + + G S+
Sbjct: 76 QLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMM-------GDSLA 127
Query: 179 HKKAKVEF----HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 234
VE +P+GVVG I +N+P A+ GN ++K SE
Sbjct: 128 SIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKL 187
Query: 235 FRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL 292
+ + A G P+ + +V+ G + ++ + I FVGS VG + + S+ L
Sbjct: 188 VELFEKA----GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENL 243
Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
V G K+ IV +D ++ V AA S+G+ C V I F++++
Sbjct: 244 KRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKL 303
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
+ V + G L +G + ++ ++ + + L++GA ++ G ++S+ D
Sbjct: 304 QEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR-ENVSD---D 359
Query: 413 QYF-PPTVIVNVNHTMKLMQEEI 434
YF PT+ NV M + ++EI
Sbjct: 360 GYFVGPTIFDNVTTEMTIWKDEI 382
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 19/348 (5%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSF--KQRRQFLRILLK 119
S +++ P + + + SR EV ER + W+ +R LR
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEV-ERTLDVLFKRGRWSARDMPGTERLAVLRKAAD 88
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW----LLSEGEKWLKPEYRSSGR 175
I + ++ E+ + GK A++GE+ +++ L G ++ ++
Sbjct: 89 IIERNLDVFAEVLVMNAGKPK-SAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD-- 145
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ + V PLGVV AI +NYP + N + + GN +V+K S +
Sbjct: 146 -TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV 204
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
+ AL G P + + ++ + E +V+ V + F GS VG +++ +
Sbjct: 205 K----ALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VK 258
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
+ELGG D IV +D D+ A R +GQ C + R +Y V +VA
Sbjct: 259 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 318
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
K + S+ G P D+G L +++ + DA++KG +LA G
Sbjct: 319 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG 366
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 19/348 (5%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSF--KQRRQFLRILLK 119
S +++ P + + + SR EV ER + W+ +R LR
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEV-ERTLDVLFKRGRWSARDMPGTERLAVLRKAAD 88
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW----LLSEGEKWLKPEYRSSGR 175
I + ++ E+ + GK A++GE+ +++ L G ++ ++
Sbjct: 89 IIERNLDVFAEVLVMNAGKPK-SAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD-- 145
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ + V PLGVV AI +NYP + N + + GN +V+K S +
Sbjct: 146 -TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV 204
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
+ AL G P + + ++ + E +V+ V + F GS VG +++ +
Sbjct: 205 K----ALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VK 258
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
+ELGG D IV +D D+ A R +GQ C + R +Y V +VA
Sbjct: 259 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 318
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
K + S+ G P D+G L +++ + DA++KG +LA G
Sbjct: 319 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG 366
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 19/348 (5%)
Query: 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSF--KQRRQFLRILLK 119
S +++ P + + + SR EV ER + W+ +R LR
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEV-ERTLDVLFKRGRWSARDMPGTERLAVLRKAAD 88
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW----LLSEGEKWLKPEYRSSGR 175
I + ++ E+ + GK A++GE+ +++ L G ++ ++
Sbjct: 89 IIERNLDVFAEVLVMNAGKPK-SAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD-- 145
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
+ + V PLGVV AI +NYP + N + + GN +V+K S +
Sbjct: 146 -TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV 204
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
+ AL G P + + ++ + E +V+ V + F GS VG +++ +
Sbjct: 205 K----ALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VK 258
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
+ELGG D IV +D D+ A R +GQ C + R +Y V +VA
Sbjct: 259 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 318
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
K + S+ G P D+G L +++ + DA++KG +LA G
Sbjct: 319 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG 366
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 155/362 (42%), Gaps = 31/362 (8%)
Query: 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
S A+VD A+KAQ WA + +R + + + EH+E I E +++G T A
Sbjct: 48 SIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA 107
Query: 144 SL-----GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 198
+L G I + + P + +++ AK GVVG I W
Sbjct: 108 NLEITLAGNITKESASFPGRV---HGRISPSNTPGKENRVYRVAK------GVVGVISPW 158
Query: 199 NYPFHNIFNPMLAAVFSGNGIVIK-VSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257
N+P + + A+ GN +VIK S+ G RI + A G P ++ + G
Sbjct: 159 NFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEA----GVPAGVISTVAG 214
Query: 258 F-AETGEALVS-SVDKII-FVGSPGVGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD 312
+E G+ V+ +V K+I F GS VGR + A + V LELGG F+V D D
Sbjct: 215 AGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADAD 274
Query: 313 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 372
+ AQ A A GQ C R V ++ F+ + + VK++ G P A +G
Sbjct: 275 IDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVG 334
Query: 373 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 432
+ L+ + A +GA + G EG + P V +V M++ +E
Sbjct: 335 PVINDSQLSGLKEKIELAKKEGATVQVEGPI----EG---RLVHPHVFSDVTSDMEIARE 387
Query: 433 EI 434
EI
Sbjct: 388 EI 389
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 20/259 (7%)
Query: 134 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
R+ GKT+ DA L E+ + + ++G K E G + + + GV
Sbjct: 598 REGGKTLDDA-LSELREAADFCRYYAAQGRKLFGSETAMPGPT--GESNALTMRGRGVFV 654
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV---GAPEN 250
AI WN+P + AA+ +GN +V K +E RI + A+A + G P++
Sbjct: 655 AISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTP-------RIAREAVALLHEAGIPKS 707
Query: 251 LVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKT--LTPVTLELGGKDAF 305
+ ++TG G AL + D ++F GS V R I R A+K + P+ E GG +A
Sbjct: 708 ALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAM 767
Query: 306 IVCDDVDVP-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364
I D +P VA V +A +S+GQ C+ +V D+ + VA + + G P
Sbjct: 768 I-ADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDP 826
Query: 365 LAGKYDMGALCLLEHSEKL 383
+G + +E ++L
Sbjct: 827 SDVATHVGPVIDVEAKQRL 845
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 112/261 (42%), Gaps = 23/261 (8%)
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 246 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 295
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
+E GGKDA IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 416 -PPTVIVNVNHTMKLMQEEII 435
PTV V ++ QEEI
Sbjct: 399 IAPTVFTEVPPKARIAQEEIF 419
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 23/261 (8%)
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 246 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 295
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
+E GGK+A IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 286 YVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 416 -PPTVIVNVNHTMKLMQEEII 435
PTV V ++ QEEI
Sbjct: 399 IAPTVFTEVPPKARIAQEEIF 419
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 24/322 (7%)
Query: 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146
+VD V AR+A WA+ +QR + L + + + + +TGK + +++
Sbjct: 43 QVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESAT- 101
Query: 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206
E+ + K+ + + + + SG + A + P GVV +N+P H
Sbjct: 102 EVTSXVNKVAISV---QAFRERTGEKSG-PLADATAVLRHKPHGVVAVFGPYNFPGHLPN 157
Query: 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRI-IQAALAAVGAPENLVDVITGFAETGEAL 265
++ A+ +GN +V K SE + IQA L P +++++ G ETG AL
Sbjct: 158 GHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGL-----PAGVLNLVQGGRETGVAL 212
Query: 266 VS--SVDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322
+ +D + F GS G ++ + + LE GG + +V + D+ ++
Sbjct: 213 AAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQ 272
Query: 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD------MGALCL 376
+A S+GQ C A R V + + + +A++V +VSA + G++D GA+
Sbjct: 273 SAFISAGQRCTCARRLLVPQGAWGDAL--LARLV-AVSATLRV-GRFDEQPAPFXGAVIS 328
Query: 377 LEHSEKLQNLVNDALDKGAEIL 398
L +E L + KGA+ L
Sbjct: 329 LSAAEHLLKAQEHLIGKGAQPL 350
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 111/261 (42%), Gaps = 23/261 (8%)
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 246 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 295
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
+E GGKDA IV + D A+ V +A GQ + A R + + Y + +V K
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKR 345
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 416 -PPTVIVNVNHTMKLMQEEII 435
PTV V ++ QEEI
Sbjct: 399 IAPTVFTEVPPKARIAQEEIF 419
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 151/336 (44%), Gaps = 11/336 (3%)
Query: 69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
+ PAT + G S A++ V A+ AQ WA ++ ++R + ++ + ++ +
Sbjct: 47 FNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFXKFVQLLNDNXNEL 106
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
E SR+ GKT+ DA G+I+ E +++ K E+ I + + P
Sbjct: 107 AEXLSREHGKTIDDAK-GDIVRGLEVCEFVIGI-PHLQKSEFTEGAGPGIDXYSIRQ--P 162
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
+G+ I +N+P A+ GN ++K SE R+ + + A G P
Sbjct: 163 VGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDP---SVPIRLAELXIEA-GLP 218
Query: 249 ENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
+++V+ G +A+++ D + FVGS + R + A+ G K+ I
Sbjct: 219 AGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXI 278
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNC-AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
+ D D+ A + A S+G+ C A + V + + ++ V+S+ GP
Sbjct: 279 IXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPYT 338
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
K D G + E +++++L++ +++GA+++ G
Sbjct: 339 DEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG 374
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 110/268 (41%), Gaps = 36/268 (13%)
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
+ P GV I WN+P AA+ +GN +V K S S G + + A
Sbjct: 664 YEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA---- 719
Query: 246 GAPENLVDVITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNASK------TLTPVT 296
G PE + + G G+ LV D I F GS G I+ A+K + +
Sbjct: 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKII 779
Query: 297 LELGGKDAF----IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
E+GGK+A D VPHV + +A GQ C+ R V +Y F+ ++
Sbjct: 780 SEMGGKNAIIIDDDADLDEAVPHV----LYSAFGFQGQKCSACSRVIVLDAVYDKFIERL 835
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH-LSEGAV 411
+ K+ GP MGA+ + ++ + AEI R GH L E V
Sbjct: 836 VSMAKATKVGPSEDPANYMGAVA--------DDKAMKSIKEYAEIGKRE--GHVLYESPV 885
Query: 412 ---DQYF-PPTVIVNVNHTMKLMQEEII 435
+ YF P T+I + ++ QEEI
Sbjct: 886 PAGEGYFVPMTIIGGIKPEHRIAQEEIF 913
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 106/267 (39%), Gaps = 40/267 (14%)
Query: 190 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
G V AI +N F I + A GN ++ K S+ A + +RI++ A G P
Sbjct: 202 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 255
Query: 249 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNAS------KTLTPVTLEL 299
N++ + T G+ + SS + I F GS + + R + +T + E
Sbjct: 256 PNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGEC 315
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GGK+ V DV V +R+A + GQ C+ R YV + ++ ++ + +
Sbjct: 316 GGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375
Query: 360 SAGPP-------LAGKYDMGALC----LLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
G P + D A LEH+ +L ILA G
Sbjct: 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL---------SILAGGQCNE--- 423
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEII 435
+V Y P +I + + +M+EEI
Sbjct: 424 -SVGYYVEPCIIESKDPQEPIMKEEIF 449
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 107/265 (40%), Gaps = 32/265 (12%)
Query: 88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-G 146
V+ A +A + SS K+R FLR + I E I EI S++TG + +A L G
Sbjct: 65 VNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETG--LPEARLNG 122
Query: 147 EIMTTCEKITWLLSEGEKW---------LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
E T ++ EK PE + + R I ++ P+G V +
Sbjct: 123 ERGRTTGQLRLFADHIEKGDYLDRRVDAAXPERQPAPRQEI----RLVQRPVGPVAVFGA 178
Query: 198 WNYP--FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI 255
N+P F AA+ +G +V+K +G + AA+ G + +I
Sbjct: 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLI 238
Query: 256 TGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL--ELGGKDAFIVCDD 310
G + + G ALV + + F GS GR + + P+ ELG + + +
Sbjct: 239 QGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPXFLLPE 298
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGA 335
A++A ++ GQ AG+
Sbjct: 299 ---------ALKARAETLGQGWAGS 314
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 46/270 (17%)
Query: 190 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
G V AI +N F I + A GN ++ K S+ A + +RI++ A G P
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 258
Query: 249 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLEL 299
N++ + G+ + SS + I F GS + + + ++ T + E
Sbjct: 259 PNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGEC 318
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GGK+ V DV V +R+A + GQ C+ R YV ++ ++ + +
Sbjct: 319 GGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRI 378
Query: 360 SAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSFGH 405
G P D G LEH+ +L ILA G
Sbjct: 379 KVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK--- 423
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
+ +V + P ++ + + +M+EEI
Sbjct: 424 -CDDSVGYFVEPCIVESKDPQEPIMKEEIF 452
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 46/270 (17%)
Query: 190 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
G V AI +N F I + A GN ++ K S+ A + +RI++ A G P
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 258
Query: 249 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLEL 299
N++ + G+ + SS + I F GS + + + ++ T + E
Sbjct: 259 PNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGEC 318
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GGK+ V DV V +R+A + GQ C+ R YV ++ ++ + +
Sbjct: 319 GGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRI 378
Query: 360 SAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSFGH 405
G P D G LEH+ +L ILA G
Sbjct: 379 KVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK--- 423
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
+ +V + P ++ + + +M+EEI
Sbjct: 424 -CDDSVGYFVEPCIVESKDPQEPIMKEEIF 452
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 46/270 (17%)
Query: 190 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
G V AI +N F I + A GN ++ K S+ A + +RI++ A G P
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 258
Query: 249 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLEL 299
N++ + G+ + SS + I F GS + + + ++ T + E
Sbjct: 259 PNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGEC 318
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
GGK+ V DV V +R+A + GQ C+ R YV ++ ++ + +
Sbjct: 319 GGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRI 378
Query: 360 SAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSFGH 405
G P D G LEH+ +L ILA G
Sbjct: 379 KVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK--- 423
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
+ +V + P ++ + + +M+EEI
Sbjct: 424 -CDDSVGYFVEPCIVESKDPQEPIMKEEIF 452
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 40/286 (13%)
Query: 89 DERVAQARKAQKVW---AKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT------ 139
DE + +A+K ++ W ++ +++ + ++ + + + E ++ I E + D K
Sbjct: 14 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 73
Query: 140 --------MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGV 191
+ D + E + CE + L + + R G + A+V P+G
Sbjct: 74 ESLVDRLALNDKRIDEXIKACETVIGLKDPVGEVIDSWVREDGLRI----ARVRV-PIGP 128
Query: 192 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 251
+G I+ + P + +LA + SGN I+++ +A S I+ AL PE+
Sbjct: 129 IG-IIYESRPNVTVETTILA-LKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESS 186
Query: 252 VDVITGFAETGEALVSSVDK-------IIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
V+ I T +LV + +I G G+ + NA+ PV LE G +
Sbjct: 187 VEFIEN---TDRSLVLEXIRLREYLSLVIPRGGYGLISFVRDNAT---VPV-LETGVGNC 239
Query: 305 FIVCDD-VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
I D+ D+ + + A Q G C AE+ VH I F+
Sbjct: 240 HIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFL 284
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
PLGVV ++ P + L ++ +GN IV NA + RII A G
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 248 PENLVDVITGFAETG-EALVSSVDKIIFVGSPGVGRMIMRNASKTLTP-VTLELGGKDAF 305
P+ + +T G + L+ D + + + G +++ A + TP + + G AF
Sbjct: 168 PKGAISCMTVPTIQGTDQLMKHKDTAVILATG--GSAMVKAAYSSGTPAIGVGPGNGPAF 225
Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
I ++P + + + +G CA + V R
Sbjct: 226 IE-RSANIPRAVKHILDSKTFDNGTICASEQSVVVER 261
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 113/292 (38%), Gaps = 19/292 (6%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 162
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 62 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 121
Query: 163 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 218
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 122 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 179
Query: 219 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 278
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 180 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 236
Query: 279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV--DVPHVA---QIAVRAALQSSGQN 331
+ + + + + +E ++ I+C D D P + VR SGQ
Sbjct: 237 DTAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 296
Query: 332 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383
C R +V + + + ++ G P MG+L E E +
Sbjct: 297 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV 348
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 113/292 (38%), Gaps = 19/292 (6%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 162
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 163 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 218
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 124 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 219 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 278
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 182 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 238
Query: 279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV--DVPHVA---QIAVRAALQSSGQN 331
+ + + + + +E ++ I+C D D P + VR SGQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 332 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383
C R +V + + + ++ G P MG+L E E +
Sbjct: 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV 350
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 113/292 (38%), Gaps = 19/292 (6%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 162
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 163 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 218
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 124 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGVP 181
Query: 219 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 278
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 182 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 238
Query: 279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV--DVPHVA---QIAVRAALQSSGQN 331
+ + + + + +E ++ I+C D D P + VR SGQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 332 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383
C R +V + + + ++ G P MG+L E E +
Sbjct: 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV 350
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 113/298 (37%), Gaps = 31/298 (10%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 162
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 163 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 218
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 124 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 219 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 278
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 182 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 238
Query: 279 GVGRMIMRNASKTLTPVTLELGGK--------DAFIVCDDV--DVPHVA---QIAVRAAL 325
+ + P ++ G + ++ I+C D D P + VR
Sbjct: 239 DTAATLRAH------PAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT 292
Query: 326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383
SGQ C R +V + + + ++ G P MG+L E E +
Sbjct: 293 VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV 350
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 9/220 (4%)
Query: 139 TMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 198
T+ D +L ++ ++ L + +YR SG + + PLGV+G I+
Sbjct: 93 TLSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRV-----PLGVIG-IIYE 146
Query: 199 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 258
+ P I L + SGN +++ A S ++I LA G P++ V V+
Sbjct: 147 SRPNVTIDAAALC-LKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETA 205
Query: 259 AETGEALVSSVDKIIFVGSPGVGR-MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 317
+ ++ + + V P G+ +I R ++ P+ L G V D V
Sbjct: 206 DRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASVTKAL 265
Query: 318 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
+ A G C E V R I +S + ++ +
Sbjct: 266 TVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYR 304
>pdb|1PSZ|A Chain A, Pneumococcal Surface Antigen Psaa
pdb|3ZTT|A Chain A, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|B Chain B, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|C Chain C, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|D Chain D, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
Length = 303
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 27/134 (20%)
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE--RFYVH 341
++ NA KT KD F V D VDV ++ GQN G E +++
Sbjct: 97 LVENAKKTEN--------KDYFAVSDGVDVIYL-----------EGQNEKGKEDPHAWLN 137
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
+ +F +AK +SA P + L E+++KL L ++ DK +I A
Sbjct: 138 LENGIIFAKNIAK---QLSAKDP--NNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEK 192
Query: 402 SFGHLSEGAVDQYF 415
SEGA +YF
Sbjct: 193 KLIVTSEGAF-KYF 205
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 112/292 (38%), Gaps = 19/292 (6%)
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 162
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 163 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 218
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 124 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 219 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 278
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 182 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 238
Query: 279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV--DVPHVA---QIAVRAALQSSGQN 331
+ + + + + +E ++ I+C D D P + VR SGQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 332 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 383
R +V + + + ++ G P MG+L E E +
Sbjct: 299 ATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV 350
>pdb|1V9P|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase
pdb|1V9P|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase
Length = 584
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 211 AAVFSGNGIVIKVSENASWSGCFYF-RIIQAALA----AVGAPENLVDVITGFAETGEAL 265
A F +G+V+K+ + A W Y R + ALA A L+DV+ TG
Sbjct: 280 ALPFEADGVVVKLDDLALWRELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVT 339
Query: 266 VSSVDKIIFVGSPGVGRMIMRNAS 289
V + +F+ V R+ + N S
Sbjct: 340 PVGVLEPVFIEGSEVSRVTLHNES 363
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 8/173 (4%)
Query: 81 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140
P + AE+D +A+ +KAQ+ +A S +Q + R + + + + + ++G +
Sbjct: 2 PVTNXAELDAXIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGXGI 61
Query: 141 VDASLGEIMTTCEKI-TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 199
V+ + + E I E + E + G I + P+G++ IV
Sbjct: 62 VEDKVIKNHFASEFIYNKYKDEQTCGILEEDDNLGTXTIAE-------PVGIICGIVPTT 114
Query: 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 252
P L ++ + NGI+ A S +++ A A GAP++++
Sbjct: 115 NPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDII 167
>pdb|3A8I|E Chain E, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8I|F Chain F, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8J|E Chain E, Crystal Structure Of Et-Ehred Complex
pdb|3A8J|F Chain F, Crystal Structure Of Et-Ehred Complex
pdb|3A8K|E Chain E, Crystal Structure Of Etd97n-Ehred Complex
pdb|3A8K|F Chain F, Crystal Structure Of Etd97n-Ehred Complex
pdb|3AB9|A Chain A, Crystal Structure Of Lipoylated E. Coli H-Protein (Reduced
Form)
Length = 129
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 43 VDLPEVG------ATVSAGDDCAVAESVXAASDIYAPVSGEIVAVNDALSDSPEL 91
>pdb|3A7A|B Chain B, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7A|D Chain D, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7L|A Chain A, Crystal Structure Of E. Coli Apoh-Protein
Length = 128
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 42 VDLPEVG------ATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPEL 90
>pdb|3K1J|A Chain A, Crystal Structure Of Lon Protease From Thermococcus
Onnurineus Na1
pdb|3K1J|B Chain B, Crystal Structure Of Lon Protease From Thermococcus
Onnurineus Na1
Length = 604
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 248 PENLVDVITGFAETGEALVSSVDK---IIFVGSPGVGRMIMRNASKTLTPV-TLE 298
PE L+D + G E + ++ ++ ++ +G PG G+ ++ A L P TLE
Sbjct: 36 PEKLIDQVIGQEHAVEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAELLPTETLE 90
>pdb|4DVG|A Chain A, Crystal Structure Of E. Histolytica Formin1 Bound To
Ehrho1-Gtpgammas
Length = 188
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEIIL 436
S+G + + PTV N +H MK EE IL
Sbjct: 42 FSKGEIPTAYVPTVFENFSHVMKYKNEEFIL 72
>pdb|3TTS|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTY|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
Length = 675
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD--KGAEILAR 400
+I AL +IV G L G Y G LC + H+E + L D KG +L R
Sbjct: 516 EIDALLPGHQNEIVLRQDWGG-LRGSYSCGILCDVIHAETAEVLAEYGADYYKGTPVLTR 574
Query: 401 GSFGH 405
FG+
Sbjct: 575 NKFGN 579
>pdb|3REF|B Chain B, Crystal Structure Of Ehrho1 Bound To Gdp And Magnesium
pdb|3REF|A Chain A, Crystal Structure Of Ehrho1 Bound To Gdp And Magnesium
pdb|3REG|A Chain A, Crystal Structure Of Ehrho1 Bound To A Gtp Analog And
Magnesium
pdb|3REG|B Chain B, Crystal Structure Of Ehrho1 Bound To A Gtp Analog And
Magnesium
Length = 194
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEIIL 436
S+G + + PTV N +H MK EE IL
Sbjct: 43 FSKGEIPTAYVPTVFENFSHVMKYKNEEFIL 73
>pdb|1DGS|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
pdb|1DGS|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
Length = 667
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 211 AAVFSGNGIVIKVSENASWSGCFYF-RIIQAALA----AVGAPENLVDVITGFAETGEAL 265
A F +G+V+K+ + W Y R + ALA A L+DV+ TG
Sbjct: 277 ALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVT 336
Query: 266 VSSVDKIIFVGSPGVGRMIMRNAS 289
V + +F+ V R+ + N S
Sbjct: 337 PVGVLEPVFIEGSEVSRVTLHNES 360
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,889,343
Number of Sequences: 62578
Number of extensions: 528205
Number of successful extensions: 1618
Number of sequences better than 100.0: 104
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1285
Number of HSP's gapped (non-prelim): 110
length of query: 439
length of database: 14,973,337
effective HSP length: 102
effective length of query: 337
effective length of database: 8,590,381
effective search space: 2894958397
effective search space used: 2894958397
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)