Query 013608
Match_columns 439
No_of_seqs 280 out of 1620
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 13:46:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013608.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013608hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 6.2E-88 2.1E-92 697.5 47.9 386 46-439 4-393 (490)
2 4e4g_A Methylmalonate-semialde 100.0 4.1E-84 1.4E-88 674.1 45.4 395 37-439 15-412 (521)
3 3ifg_A Succinate-semialdehyde 100.0 1.1E-83 3.9E-88 666.2 48.0 380 48-439 12-394 (484)
4 3iwj_A Putative aminoaldehyde 100.0 1.5E-83 5.1E-88 668.7 46.5 386 47-439 6-399 (503)
5 3ed6_A Betaine aldehyde dehydr 100.0 1.6E-83 5.6E-88 669.5 46.2 384 48-439 32-420 (520)
6 3ek1_A Aldehyde dehydrogenase; 100.0 2.7E-83 9.1E-88 665.5 47.2 378 48-439 32-412 (504)
7 3rh9_A Succinate-semialdehyde 100.0 1.3E-83 4.4E-88 668.2 44.4 381 47-439 10-394 (506)
8 3k2w_A Betaine-aldehyde dehydr 100.0 2.6E-83 8.8E-88 666.0 45.8 386 46-439 10-398 (497)
9 2o2p_A Formyltetrahydrofolate 100.0 3.9E-83 1.3E-87 666.2 46.9 382 49-439 37-425 (517)
10 3i44_A Aldehyde dehydrogenase; 100.0 7.1E-83 2.4E-87 661.8 47.5 382 47-439 24-409 (497)
11 1a4s_A ALDH, betaine aldehyde 100.0 1E-82 3.5E-87 661.9 47.9 386 45-439 16-406 (503)
12 3r31_A BADH, betaine aldehyde 100.0 4.1E-83 1.4E-87 666.1 43.5 381 47-439 13-398 (517)
13 1bxs_A Aldehyde dehydrogenase; 100.0 1.4E-82 4.8E-87 660.2 47.2 380 48-439 20-406 (501)
14 1o04_A Aldehyde dehydrogenase, 100.0 9E-83 3.1E-87 661.5 45.5 379 49-439 20-405 (500)
15 2j6l_A Aldehyde dehydrogenase 100.0 2.9E-82 9.8E-87 658.6 48.3 382 48-439 23-406 (500)
16 4f3x_A Putative aldehyde dehyd 100.0 1.1E-82 3.6E-87 660.6 44.1 387 39-439 17-407 (498)
17 3b4w_A Aldehyde dehydrogenase; 100.0 1.8E-82 6.1E-87 659.0 45.8 380 50-439 10-393 (495)
18 3pqa_A Lactaldehyde dehydrogen 100.0 2.8E-82 9.5E-87 655.7 46.2 370 51-439 2-374 (486)
19 2d4e_A 5-carboxymethyl-2-hydro 100.0 5.3E-82 1.8E-86 658.4 48.2 382 49-439 27-415 (515)
20 3u4j_A NAD-dependent aldehyde 100.0 2.4E-82 8.3E-87 661.8 45.5 381 48-439 22-408 (528)
21 3prl_A NADP-dependent glyceral 100.0 5.9E-82 2E-86 656.1 47.3 375 49-439 12-392 (505)
22 2imp_A Lactaldehyde dehydrogen 100.0 7.2E-82 2.5E-86 653.1 47.1 379 49-439 7-389 (479)
23 3jz4_A Succinate-semialdehyde 100.0 1.1E-81 3.9E-86 652.0 48.3 379 49-439 10-391 (481)
24 2ve5_A BADH, betaine aldehyde 100.0 9.7E-82 3.3E-86 654.3 47.4 384 48-439 6-393 (490)
25 1wnd_A Putative betaine aldehy 100.0 4.8E-82 1.6E-86 655.3 44.9 381 45-439 20-405 (495)
26 3qan_A 1-pyrroline-5-carboxyla 100.0 1.6E-81 5.5E-86 656.9 46.7 377 48-439 37-423 (538)
27 2w8n_A Succinate-semialdehyde 100.0 3.5E-81 1.2E-85 648.5 43.5 376 49-439 13-396 (487)
28 3r64_A NAD dependent benzaldeh 100.0 1E-80 3.4E-85 648.2 46.8 378 47-439 11-394 (508)
29 3ros_A NAD-dependent aldehyde 100.0 9.2E-81 3.2E-85 644.0 44.5 361 65-439 5-368 (484)
30 1uxt_A Glyceraldehyde-3-phosph 100.0 1.4E-80 4.7E-85 645.7 45.2 375 48-439 18-401 (501)
31 1t90_A MMSDH, probable methylm 100.0 9E-81 3.1E-85 645.7 43.7 379 49-439 6-387 (486)
32 4dng_A Uncharacterized aldehyd 100.0 1.4E-80 4.6E-85 644.9 45.0 378 48-439 6-387 (485)
33 3ty7_A Putative aldehyde dehyd 100.0 8.1E-81 2.8E-85 645.5 41.9 379 48-439 7-388 (478)
34 1uzb_A 1-pyrroline-5-carboxyla 100.0 2.3E-80 8E-85 646.6 45.0 376 49-439 38-423 (516)
35 1euh_A NADP dependent non phos 100.0 4.7E-80 1.6E-84 639.0 45.3 371 49-439 5-383 (475)
36 3ju8_A Succinylglutamic semial 100.0 1.7E-79 5.7E-84 636.8 48.8 375 50-439 7-386 (490)
37 4h7n_A Aldehyde dehydrogenase; 100.0 2.4E-79 8.3E-84 633.5 42.1 368 61-439 3-370 (474)
38 3etf_A Putative succinate-semi 100.0 1.8E-78 6.3E-83 625.6 46.3 365 62-439 5-371 (462)
39 4e3x_A Delta-1-pyrroline-5-car 100.0 2.2E-78 7.7E-83 634.7 43.9 379 47-439 62-453 (563)
40 2y53_A Aldehyde dehydrogenase 100.0 6E-77 2E-81 623.7 42.3 381 49-439 8-409 (534)
41 4f9i_A Proline dehydrogenase/d 100.0 6.1E-76 2.1E-80 648.1 45.9 377 48-439 531-917 (1026)
42 3lns_A Benzaldehyde dehydrogen 100.0 1.1E-75 3.6E-80 603.6 41.3 358 64-439 6-364 (457)
43 3v4c_A Aldehyde dehydrogenase 100.0 8.3E-75 2.8E-79 606.7 36.4 372 46-439 27-418 (528)
44 3sza_A Aldehyde dehydrogenase, 100.0 3.2E-74 1.1E-78 593.4 39.8 342 82-439 14-356 (469)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 1E-73 3.5E-78 596.1 40.0 361 60-439 3-383 (510)
46 3haz_A Proline dehydrogenase; 100.0 9E-69 3.1E-73 589.9 43.4 343 80-439 544-892 (1001)
47 3k9d_A LMO1179 protein, aldehy 100.0 2.6E-63 8.8E-68 512.3 26.9 332 78-439 4-347 (464)
48 3my7_A Alcohol dehydrogenase/a 100.0 7.5E-63 2.5E-67 507.3 26.2 331 80-439 1-342 (452)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 6.3E-63 2.1E-67 508.1 25.2 320 66-439 9-341 (463)
50 1vlu_A Gamma-glutamyl phosphat 100.0 4.6E-61 1.6E-65 494.9 17.8 310 87-439 15-346 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 5E-57 1.7E-61 462.8 28.7 303 85-439 25-345 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 1.9E-57 6.6E-62 463.6 24.5 302 84-439 12-328 (427)
53 4gic_A HDH, histidinol dehydro 73.8 71 0.0024 31.4 22.3 162 179-359 120-298 (423)
54 1b93_A Protein (methylglyoxal 47.6 22 0.00075 29.9 4.6 113 190-329 12-135 (152)
55 1vmd_A MGS, methylglyoxal synt 46.6 72 0.0025 27.5 7.8 122 181-329 18-151 (178)
56 2yvq_A Carbamoyl-phosphate syn 40.4 29 0.001 28.6 4.4 57 243-299 64-132 (143)
57 2xw6_A MGS, methylglyoxal synt 35.8 11 0.00039 31.0 1.0 80 207-298 22-111 (134)
58 3fgh_A Transcription factor A, 34.7 1.1E+02 0.0036 21.1 6.1 36 94-129 29-64 (67)
59 3v42_A Folliculin; tumor suppr 29.4 83 0.0028 28.2 5.7 65 205-279 20-85 (226)
60 2bon_A Lipid kinase; DAG kinas 29.3 2.5E+02 0.0086 26.1 9.6 85 238-325 49-146 (332)
61 2eqz_A High mobility group pro 27.3 1.5E+02 0.005 21.7 6.0 37 93-129 47-83 (86)
62 2qv7_A Diacylglycerol kinase D 24.9 1.8E+02 0.0062 27.2 7.7 88 236-326 45-143 (337)
63 2v9v_A Selenocysteine-specific 24.0 80 0.0027 25.1 4.3 81 319-402 36-125 (135)
64 2co9_A Thymus high mobility gr 22.6 2.5E+02 0.0084 21.2 6.7 40 95-134 49-88 (102)
65 1v63_A Nucleolar transcription 21.3 2.1E+02 0.0072 21.7 6.0 40 94-133 37-76 (101)
66 1hry_A Human SRY; DNA, DNA-bin 20.9 2E+02 0.0069 20.1 5.6 32 95-126 36-67 (76)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.2e-88 Score=697.51 Aligned_cols=386 Identities=28% Similarity=0.407 Sum_probs=359.8
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (439)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~ 125 (439)
.++.++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|+.+|.++|+++++.|++|+
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (439)
Q Consensus 126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~ 205 (439)
++|++++++|+|||+.+++..|+..+++.++|+++..++... +..+.. .....+++|+|+|||++|+|||||+...
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 159 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG-EQIPLR---ETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCE-EEEEEE---TTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccC-cccccc---CCcceeEEecceeEEEEeccccCcchhh
Confidence 999999999999999999666799999999999998876533 222221 3356788999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
++++++||++||+||+|||+.+|+++..+++++++ +|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+
T Consensus 160 ~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~e----aGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~ 235 (490)
T 2wme_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTE----AGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHH----hCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHH
Confidence 99999999999999999999999999988888766 899999999999975 78899988 899999999999999
Q ss_pred HHHH-HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608 283 MIMR-NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (439)
Q Consensus 283 ~v~~-~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~ 361 (439)
++++ .++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus 236 ~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v 315 (490)
T 2wme_A 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRL 315 (490)
T ss_dssp HHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcC
Confidence 8876 567789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+|.++++++|||+++.++++++++|++++++||++++||.+.......+|+|++||||.++++||++++||+||||+
T Consensus 316 Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl 393 (490)
T 2wme_A 316 GDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVM 393 (490)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEE
Confidence 999999999999999999999999999999999999999997765545689999999999999999999999999985
No 2
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.1e-84 Score=674.12 Aligned_cols=395 Identities=20% Similarity=0.279 Sum_probs=359.1
Q ss_pred CCCCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q 013608 37 DVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRI 116 (439)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 116 (439)
.++-|-.+......+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++
T Consensus 15 ~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~ 94 (521)
T 4e4g_A 15 TENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMK 94 (521)
T ss_dssp ---------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred chhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 33778878877788999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEc
Q 013608 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 196 (439)
Q Consensus 117 l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~ 196 (439)
+++.|++|+++|++++++|+||+..++. +|+..+++.++|+++..... ..+..+. ...+...+++++|+|||++|+
T Consensus 95 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~-~~~~~~~--~~~~~~~~~~~~P~GVV~~I~ 170 (521)
T 4e4g_A 95 FVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQ-KSEFTEG--AGPGIDMYSIRQPVGIGAGIT 170 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHT-CEEEEEE--EETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-cCccccc--CCCCcceeEEEcCCcEEEEEC
Confidence 9999999999999999999999999994 79999999999999765543 3322211 012345788999999999999
Q ss_pred CCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEE
Q 013608 197 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIF 274 (439)
Q Consensus 197 p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f 274 (439)
|||||+...++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|+.+.++.|++ ++|+|+|
T Consensus 171 PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~F 246 (521)
T 4e4g_A 171 PFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIE----AGLPAGILNVVNGDKGAVDAILTHPDIAAVSF 246 (521)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHTCTTCCEEEE
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----hCCCcCeEEEEeCChHHHHHHHhCCCcCEEEE
Confidence 99999999999999999999999999999999999988887765 89999999999998888889987 8999999
Q ss_pred eCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehh-hHHHHHHHHH
Q 013608 275 VGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVA 353 (439)
Q Consensus 275 ~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~-i~d~f~~~L~ 353 (439)
|||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|.
T Consensus 247 TGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~ 326 (521)
T 4e4g_A 247 VGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLV 326 (521)
T ss_dssp ESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccC
Q 013608 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433 (439)
Q Consensus 354 ~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E 433 (439)
++++++++|+|.++++++|||+++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||
T Consensus 327 ~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 406 (521)
T 4e4g_A 327 PMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTE 406 (521)
T ss_dssp HHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCc
Confidence 99999999999999999999999999999999999999999999999986433334679999999999999999999999
Q ss_pred ccccCC
Q 013608 434 IILWVS 439 (439)
Q Consensus 434 ~FgPv~ 439 (439)
+||||+
T Consensus 407 iFGPVl 412 (521)
T 4e4g_A 407 IFGPVL 412 (521)
T ss_dssp CCSSEE
T ss_pred ccCcEE
Confidence 999985
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.1e-83 Score=666.17 Aligned_cols=380 Identities=28% Similarity=0.468 Sum_probs=355.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (439)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (439)
Q Consensus 128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~ 207 (439)
|++++++|+||+..++ .+|+..+++.++|++...++.... ..+.. ..+...+++++|+|||++|+|||||+...++
T Consensus 92 la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (484)
T 3ifg_A 92 LALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGD-TLPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIAR 167 (484)
T ss_dssp HHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCc-ccccc--CCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence 9999999999999998 479999999999999887764322 22211 1235678999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (439)
Q Consensus 208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v 284 (439)
++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|++ +.++.|++ ++|+|.||||+.+|+.|
T Consensus 168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i 243 (484)
T 3ifg_A 168 KVGPALAAGCPIVVKPAESTPFSALAMAFLAER----AGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL 243 (484)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999988887665 899999999999965 78899988 89999999999999999
Q ss_pred HHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCC
Q 013608 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (439)
Q Consensus 285 ~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~ 364 (439)
++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 244 ~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 323 (484)
T 3ifg_A 244 MAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG 323 (484)
T ss_dssp HHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
.++++++|||+++.++++++++|++++++||++++||.+.. ..|+|++|||+.+++++|++++||+||||+
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 394 (484)
T 3ifg_A 324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHA----LGHGFFEPTVLTGVKPDMDVAKEETFGPLA 394 (484)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCT----TCTTCBCCEEEEEECTTSGGGTSCCCSSEE
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCceEcCEEEecCCCCChhhCCeeeCcEE
Confidence 99999999999999999999999999999999999998532 379999999999999999999999999985
No 4
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.5e-83 Score=668.69 Aligned_cols=386 Identities=29% Similarity=0.449 Sum_probs=358.6
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH-----HHhhcCHHHHHHHHHHHHHHH
Q 013608 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-----VWAKSSFKQRRQFLRILLKYI 121 (439)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~l~~~l 121 (439)
...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 345689999999988889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcc
Q 013608 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201 (439)
Q Consensus 122 ~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P 201 (439)
++|+++|++++++|+||+..++ ..|+..+++.++|++++.+++......+..........+++++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 9999999999999999999998 479999999999999998876544322211111345678999999999999999999
Q ss_pred hhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCCh
Q 013608 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSP 278 (439)
Q Consensus 202 ~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~ 278 (439)
+...++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|++ +.++.|+. ++|+|+||||+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~ 240 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKE----VGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSS 240 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHH----hCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcH
Confidence 999999999999999999999999999999988877665 899999999999975 77889987 89999999999
Q ss_pred HHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh
Q 013608 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (439)
Q Consensus 279 ~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~ 358 (439)
.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 241 ~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 320 (503)
T 3iwj_A 241 ATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKN 320 (503)
T ss_dssp HHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccC
Q 013608 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWV 438 (439)
Q Consensus 359 l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv 438 (439)
+++|+|+++++++|||+++.++++++++|++++++||++++||.+... ...|+|++|||+.+++++|++++||+||||
T Consensus 321 ~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 398 (503)
T 3iwj_A 321 IKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEH--LKKGFFIEPTIITDVTTNMQIWREEVFGPV 398 (503)
T ss_dssp CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CCSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred ccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCcc--CCCCceeCCeeeecCCCCchhhCceeeCce
Confidence 999999999999999999999999999999999999999999985321 257999999999999999999999999998
Q ss_pred C
Q 013608 439 S 439 (439)
Q Consensus 439 ~ 439 (439)
+
T Consensus 399 l 399 (503)
T 3iwj_A 399 L 399 (503)
T ss_dssp E
T ss_pred E
Confidence 5
No 5
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.6e-83 Score=669.46 Aligned_cols=384 Identities=25% Similarity=0.395 Sum_probs=358.0
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQ 125 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~l~~~l~~~~ 125 (439)
.+.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++|| ..|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 3568999999998888999999999999999999999999999999999999 88999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (439)
Q Consensus 126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~ 205 (439)
++|++++++|+||+..+++ +|+..+++.++|++..++++... ..+... .....+++++|+|||++|+|||||+...
T Consensus 112 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 187 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGE-MIDSPI--PDTESKIVKEPVGVVTQITPWNYPLLQA 187 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEE-EECCSS--TTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCe-ecccCC--CCCcccccccCccEEEEECCCccHHHHH
Confidence 9999999999999999995 79999999999999998875432 222211 2356789999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+
T Consensus 188 ~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~e----aGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~ 263 (520)
T 3ed6_A 188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELMEE----VGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK 263 (520)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHH----HCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHH----hCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 99999999999999999999999999988887765 899999999999964 78899987 899999999999999
Q ss_pred HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (439)
Q Consensus 283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G 362 (439)
.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 264 ~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG 343 (520)
T 3ed6_A 264 HIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLG 343 (520)
T ss_dssp HHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBC
T ss_pred HHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+|.++++++|||+++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+||||+
T Consensus 344 ~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl 420 (520)
T 3ed6_A 344 NGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVV 420 (520)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEE
Confidence 99999999999999999999999999999999999999986432223579999999999999999999999999985
No 6
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.7e-83 Score=665.53 Aligned_cols=378 Identities=27% Similarity=0.446 Sum_probs=354.1
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (439)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (439)
Q Consensus 128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~ 207 (439)
|++++++|+|||..+++ +|+..+++.++|++....+.... ..+.. ..+...+++++|+|||++|+|||||+...++
T Consensus 112 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 187 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGD-TIPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITR 187 (504)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccc--cccccceeeccCceEEEEECCCcchHHHHHH
Confidence 99999999999999984 69999999999999987764322 22211 1235678999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (439)
Q Consensus 208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v 284 (439)
++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+.|
T Consensus 188 ~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~e----aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i 263 (504)
T 3ek1_A 188 KAAPALAAGCTMIVRPADLTPLTALALGVLAEK----AGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLL 263 (504)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHH----TTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----hCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999988877665 899999999999865 78899988 89999999999999999
Q ss_pred HHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCC
Q 013608 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (439)
Q Consensus 285 ~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~ 364 (439)
++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 264 ~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 343 (504)
T 3ek1_A 264 MAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG 343 (504)
T ss_dssp HHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
.++++++|||+++.++++++++|++++++||++++||.+ ..|+|++|||+.+++++|++++||+||||+
T Consensus 344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 412 (504)
T 3ek1_A 344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLA 412 (504)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEE
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEE
Confidence 999999999999999999999999999999999999984 369999999999999999999999999985
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.3e-83 Score=668.23 Aligned_cols=381 Identities=26% Similarity=0.400 Sum_probs=357.6
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (439)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~ 126 (439)
...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 44578999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEE-eeccEEEEEcCCCcchhhh
Q 013608 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNI 205 (439)
Q Consensus 127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~PlGVv~~i~p~N~P~~~~ 205 (439)
+|++++++|+||+..++. +|+..+++.++|++++++++... ..+.. .+...++++ +|+|||++|+|||||+...
T Consensus 90 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 164 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSH-TIPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMI 164 (506)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCE-ECSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceeeEeecccceEEEEECCCchHHHHH
Confidence 999999999999999996 89999999999999999887543 22222 335677888 9999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+
T Consensus 165 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~ 240 (506)
T 3rh9_A 165 AKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDK----LDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGR 240 (506)
T ss_dssp HHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTT----TTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHH----hCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999988877655 899999999999965 78899988 799999999999999
Q ss_pred HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (439)
Q Consensus 283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G 362 (439)
.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 241 ~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 320 (506)
T 3rh9_A 241 KLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVG 320 (506)
T ss_dssp HHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+|.++++++|||+++.++++++++|++++++||++++||.+.+ ...|+|++|||+.+++++|++++||+||||+
T Consensus 321 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 394 (506)
T 3rh9_A 321 DGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLV 394 (506)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred CCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEE
Confidence 9999999999999999999999999999999999999998532 1279999999999999999999999999985
No 8
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=2.6e-83 Score=666.01 Aligned_cols=386 Identities=26% Similarity=0.424 Sum_probs=356.2
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (439)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~ 125 (439)
....++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENK 89 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35567899999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (439)
Q Consensus 126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~ 205 (439)
++|++++++|+||+..++. .|+..+++.++|++++++++..... +.. ..+...+++++|+|||++|+|||||+...
T Consensus 90 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 90 HILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 9999999999999999995 7999999999999999888754422 221 13456789999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~ 241 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKE----AGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGK 241 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHH----TTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----hCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHH
Confidence 99999999999999999999999999988887655 899999999999965 78899988 799999999999999
Q ss_pred HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (439)
Q Consensus 283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G 362 (439)
.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 242 ~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg 321 (497)
T 3k2w_A 242 QIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVG 321 (497)
T ss_dssp HHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+|.++++++|||+++.++++++++|++++++||++++||.+...+..+.|+|++|||+.+++++|++++||+||||+
T Consensus 322 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl 398 (497)
T 3k2w_A 322 DPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPIL 398 (497)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEE
Confidence 99999999999999999999999999999999999999984211122379999999999999999999999999985
No 9
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=3.9e-83 Score=666.20 Aligned_cols=382 Identities=24% Similarity=0.385 Sum_probs=354.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~ 126 (439)
+.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999999886678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCcc-ccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (439)
Q Consensus 127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~PlGVv~~i~p~N~P~~~~ 205 (439)
+|++++++|+|||..++..+|+..+++.++|++++++++.... .+.... ......+++++|+|||++|+|||||+...
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 195 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML 195 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHH
Confidence 9999999999999999965899999999999999988765432 222100 11235689999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+
T Consensus 196 ~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~e----aGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~ 271 (517)
T 2o2p_A 196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLK----AGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGK 271 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHH----TTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHH----hCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999988888765 899999999999965 67888988 899999999999999
Q ss_pred HHHHHhh-ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (439)
Q Consensus 283 ~v~~~aa-~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~ 361 (439)
.|++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 272 ~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~v 351 (517)
T 2o2p_A 272 HIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKI 351 (517)
T ss_dssp HHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+|.++++++|||+++.++++++++|++++++||++++||.... ..|+|++||||.+++++|++++||+||||+
T Consensus 352 Gdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 425 (517)
T 2o2p_A 352 GNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP----RPGFFFQPTVFTDVEDHMYIAKEESFGPIM 425 (517)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSGGGTSCCCSSEE
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCC----CCCCeECCEEEeCCCCCChhhhccccccEE
Confidence 99999999999999999999999999999999999999998531 369999999999999999999999999985
No 10
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=7.1e-83 Score=661.81 Aligned_cols=382 Identities=26% Similarity=0.399 Sum_probs=354.9
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (439)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~ 126 (439)
...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 103 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS 103 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEE-EeeccEEEEEcCCCcchhhh
Q 013608 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNI 205 (439)
Q Consensus 127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~PlGVv~~i~p~N~P~~~~ 205 (439)
+|++++++|+||+..+++.+|+..+++.++++++....+..+...+ .+...+++ ++|+|||++|+|||||+...
T Consensus 104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 178 (497)
T 3i44_A 104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQV 178 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHH
Confidence 9999999999999999966899999999999998877654432221 12346778 99999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~ 254 (497)
T 3i44_A 179 TLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDE----AALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGK 254 (497)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHH----TTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHH----hCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 99999999999999999999999999988887665 899999999999965 78899987 899999999999999
Q ss_pred HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (439)
Q Consensus 283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G 362 (439)
.|++.++++++|+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 255 ~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG 333 (497)
T 3i44_A 255 DISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVG 333 (497)
T ss_dssp HHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+|.++++++|||+++.++++++++|++++++||++++||..... ....|+|++|||+.+++++|++++||+||||+
T Consensus 334 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 409 (497)
T 3i44_A 334 PGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVL 409 (497)
T ss_dssp CTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCT-TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-cCCCCcEECCEEEEeCCCCCHHHcCcccCceE
Confidence 99999999999999999999999999999999999999952111 12479999999999999999999999999985
No 11
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1e-82 Score=661.94 Aligned_cols=386 Identities=28% Similarity=0.390 Sum_probs=357.0
Q ss_pred CCCCcccccCCcccCCCCCCe-EEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 013608 45 TPDNSFIYIPPRGRTPQSETK-VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE 123 (439)
Q Consensus 45 ~~~~~~~~i~g~~~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~ 123 (439)
......+||+|+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++
T Consensus 16 ~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 16 VVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHH
Confidence 334567899999998877778 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchh
Q 013608 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203 (439)
Q Consensus 124 ~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~ 203 (439)
|+++|++++++|+||+..++ .+|+..+++.++|++++++++.. +..+.. .+...+++++|+|||++|+|||||+.
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~ 170 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFM 170 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHH
Confidence 99999999999999999998 57999999999999999887654 222222 23456889999999999999999999
Q ss_pred hhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHH
Q 013608 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG 281 (439)
Q Consensus 204 ~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~ 281 (439)
..++++++||++||+||+|||+.+|+++..+++++++ +|+|+|++|+|+|.++.++.|++ ++|+|+||||+.+|
T Consensus 171 ~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~----aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G 246 (503)
T 1a4s_A 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHE----AGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTG 246 (503)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----TTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----hCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHH
Confidence 9999999999999999999999999999988888765 89999999999995577888987 79999999999999
Q ss_pred HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (439)
Q Consensus 282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~ 361 (439)
+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 247 ~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 326 (503)
T 1a4s_A 247 KKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVV 326 (503)
T ss_dssp HHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCC--CCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~--~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+|.++++++|||+++.++++++++|++++++||++++||....++. ...|+|++|||+.+++++|++++||+||||+
T Consensus 327 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 406 (503)
T 1a4s_A 327 GDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVM 406 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceE
Confidence 99999999999999999999999999999999999999998531111 1369999999999999999999999999985
No 12
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.1e-83 Score=666.07 Aligned_cols=381 Identities=28% Similarity=0.372 Sum_probs=355.0
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (439)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~ 126 (439)
...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhh---hcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchh
Q 013608 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203 (439)
Q Consensus 127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~ 203 (439)
+|++++++|+||+..++ |+..+++.++|++++.++ ++..+..+.. .+. .+++++|+|||++|+|||||+.
T Consensus 93 ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp HHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHH
Confidence 99999999999999987 999999999999988776 2333333321 234 8899999999999999999999
Q ss_pred hhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHH
Q 013608 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG 281 (439)
Q Consensus 204 ~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~ 281 (439)
..++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|+.+.++.|++ .+|+|+||||+.+|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~e----aGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G 241 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIE----AGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTG 241 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHH----TTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHH----hCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHH
Confidence 9999999999999999999999999999988887765 89999999999996688999998 79999999999999
Q ss_pred HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (439)
Q Consensus 282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~ 361 (439)
+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 242 ~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 321 (517)
T 3r31_A 242 RKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMIL 321 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+|.++++++|||+++.++++++++|++++++||++++|| +........|+|++|||+.+++++|++++||+||||+
T Consensus 322 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 398 (517)
T 3r31_A 322 GDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVM 398 (517)
T ss_dssp CCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEE
T ss_pred CCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEE
Confidence 9999999999999999999999999999999999999999 4211123579999999999999999999999999985
No 13
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.4e-82 Score=660.18 Aligned_cols=380 Identities=27% Similarity=0.418 Sum_probs=355.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH 124 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~l~~~l~~~ 124 (439)
...+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 34689999999887778999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (439)
Q Consensus 125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~ 204 (439)
+++|++++++|+||+..++...|+..+++.++|++++++++.... .+.. .+...+++++|+|||++|+|||||+..
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT-IPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLM 175 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe-eecc---CCcceeEEecCCceEEEECCCcchHHH
Confidence 999999999999999998867899999999999999998875542 2221 234568899999999999999999999
Q ss_pred hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (439)
Q Consensus 205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~ 281 (439)
.++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 251 (501)
T 1bxs_A 176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKE----AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 251 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHH----HTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHH----hCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHH
Confidence 999999999999999999999999999988887665 899999999999954 78899998 79999999999999
Q ss_pred HHHHHHhh-ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608 282 RMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (439)
Q Consensus 282 ~~v~~~aa-~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~ 360 (439)
+.|++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 252 ~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 331 (501)
T 1bxs_A 252 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV 331 (501)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcC
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+|+|.++++++|||+++.++++++++|++++++||++++||... ...|+|++|||+.+++++|++++||+||||+
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 406 (501)
T 1bxs_A 332 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQ 406 (501)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceE
Confidence 99999999999999999999999999999999999999999742 1369999999999999999999999999985
No 14
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=9e-83 Score=661.48 Aligned_cols=379 Identities=26% Similarity=0.403 Sum_probs=355.0
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ 125 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~l~~~l~~~~ 125 (439)
..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|+
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999999887788999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (439)
Q Consensus 126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~ 205 (439)
++|++++++|+||+..++...|+..+++.++|++++++++..+. .+.. .+...+++++|+|||++|+|||||+...
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 175 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT-IPID---GDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-eecC---CCceEEEEEecCCcEEEECCCCchHHHH
Confidence 99999999999999998867899999999999999988875542 2221 2345688999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHH
Q 013608 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|. .+.++.|++ ++|+|+||||+.+|+
T Consensus 176 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~ 251 (500)
T 1o04_A 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKE----AGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251 (500)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH----hCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 99999999999999999999999999988877665 89999999999995 478899998 799999999999999
Q ss_pred HHHHHhh-ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (439)
Q Consensus 283 ~v~~~aa-~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~ 361 (439)
.|++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 252 ~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 331 (500)
T 1o04_A 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVV 331 (500)
T ss_dssp HHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+|.++++++|||+++.++++++++|++++++||++++||... ...|+|++|||+.+++++|++++||+||||+
T Consensus 332 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 405 (500)
T 1o04_A 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405 (500)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEE
Confidence 9999999999999999999999999999999999999999842 1369999999999999999999999999985
No 15
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=2.9e-82 Score=658.61 Aligned_cols=382 Identities=22% Similarity=0.320 Sum_probs=356.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (439)
.+.+||+|+|+. ++++++++||+||+++++++.++.+|+++++++|++||..|+.++..+|.++|+++++.|++|+++
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQV 100 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 355799999994 567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (439)
Q Consensus 128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~ 207 (439)
|++++++|+||+..++ .+|+..+++.++|++++.+++... ..+.. ......+++++|+|||++|+|||||+...++
T Consensus 101 la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 101 LGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGP-ILPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCB-EECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 9999999999999998 689999999999999887765332 11211 0123457789999999999999999999999
Q ss_pred HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (439)
Q Consensus 208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~ 285 (439)
++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|+
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~ 256 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVG 256 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999996678899987 999999999999999999
Q ss_pred HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (439)
Q Consensus 286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~ 365 (439)
+.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus 257 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 336 (500)
T 2j6l_A 257 LMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPW 336 (500)
T ss_dssp HHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
++++++|||+++.++++++++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||+
T Consensus 337 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 406 (500)
T 2j6l_A 337 DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD----RPGNYVEPTIVTGLGHDASIAHTETFAPIL 406 (500)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSSCBCCEEEESCCTTCHHHHSCCSSSEE
T ss_pred cCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCCEEcCEEEECCCCcChhhcCcccCceE
Confidence 9999999999999999999999999999999999998531 369999999999999999999999999985
No 16
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.1e-82 Score=660.65 Aligned_cols=387 Identities=23% Similarity=0.342 Sum_probs=355.7
Q ss_pred CCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 013608 39 LDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118 (439)
Q Consensus 39 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~ 118 (439)
+.|.... ...++||+|+|+.+.++ +++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus 17 ~~~~~~~-~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a 94 (498)
T 4f3x_A 17 NLYFQSM-MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIA 94 (498)
T ss_dssp ------C-CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred chhhhhc-cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 4444443 45679999999998766 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCC
Q 013608 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 198 (439)
Q Consensus 119 ~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~ 198 (439)
+.|++|+++|++++++|+||+..++..+|+..+++.++|+++.++++... ..+.. ..+...+++++|+|||++|+||
T Consensus 95 ~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~Pw 171 (498)
T 4f3x_A 95 DAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP-AAGEY--LPGHTSMIRRDPIGIVGSIAPW 171 (498)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECCEEEEECCS
T ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCc-cccCC--cccccceEEEcCcceEEEECCC
Confidence 99999999999999999999999995589999999999999998875332 22211 1245678999999999999999
Q ss_pred CcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEe
Q 013608 199 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFV 275 (439)
Q Consensus 199 N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~ 275 (439)
|||+...++++++||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|+|++ +.++.|++ ++|+|+||
T Consensus 172 N~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~e----a-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FT 246 (498)
T 4f3x_A 172 NYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIAD----I-LPEGVVNVITGRGETVGNALINHPKVGMVSIT 246 (498)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHT----T-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEE
T ss_pred chHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHH----h-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEE
Confidence 999999999999999999999999999999999998888765 6 9999999999965 68899998 89999999
Q ss_pred CChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHH
Q 013608 276 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355 (439)
Q Consensus 276 Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~ 355 (439)
||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 247 GS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 326 (498)
T 4f3x_A 247 GDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSA 326 (498)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCC-EEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCc
Q 013608 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434 (439)
Q Consensus 356 ~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga-~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~ 434 (439)
++++++|+|.++++++|||+++.++++++++|++++++|| ++++||.+. ...|+|++|||+.+++++|++++||+
T Consensus 327 ~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEi 402 (498)
T 4f3x_A 327 VSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREV 402 (498)
T ss_dssp HTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCC
T ss_pred HHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCce
Confidence 9999999999999999999999999999999999999999 999999853 24799999999999999999999999
Q ss_pred cccCC
Q 013608 435 ILWVS 439 (439)
Q Consensus 435 FgPv~ 439 (439)
||||+
T Consensus 403 FGPVl 407 (498)
T 4f3x_A 403 FGPVV 407 (498)
T ss_dssp CSSEE
T ss_pred eCcEE
Confidence 99985
No 17
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-82 Score=658.99 Aligned_cols=380 Identities=28% Similarity=0.464 Sum_probs=355.1
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQEL 127 (439)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (439)
.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|+++
T Consensus 10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (495)
T 3b4w_A 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL 89 (495)
T ss_dssp SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999887778999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (439)
Q Consensus 128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~ 207 (439)
|++++++|+||+..++...|+..+++.++|++++++++.... .+.. .....+++++|+|||++|+|||||+...++
T Consensus 90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 165 (495)
T 3b4w_A 90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVN 165 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHH
Confidence 999999999999999865899999999999999988875532 2211 223568899999999999999999999999
Q ss_pred HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (439)
Q Consensus 208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~ 285 (439)
++++||++||+||+|||+.+|+++.++++++.+ +|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|+
T Consensus 166 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 166 KIAPALLAGCTIVLKPAAETPLTANALAEVFAE----VGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHH----TTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCEEEEecCCccHHHHHHHHHHHHH----hCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999999988888766 89999999999995578999988 899999999999999999
Q ss_pred HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (439)
Q Consensus 286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~ 365 (439)
+.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 321 (495)
T 3b4w_A 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPS 321 (495)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTT
T ss_pred HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
++++++|||+++.++++++++|++++++||++++||..... ...|+|++|||+.+++++|++++||+||||+
T Consensus 322 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 393 (495)
T 3b4w_A 322 DPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVL 393 (495)
T ss_dssp CTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred cCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceE
Confidence 99999999999999999999999999999999999985321 1369999999999999999999999999985
No 18
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=2.8e-82 Score=655.67 Aligned_cols=370 Identities=26% Similarity=0.394 Sum_probs=344.9
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 013608 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (439)
Q Consensus 51 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~ 130 (439)
+||+|+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999875 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHH
Q 013608 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (439)
Q Consensus 131 ~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~ 210 (439)
++++|+||+..+++ +|+..+++.++|++++++++.... .+.. +...+++++|+|||++|+|||||+...+++++
T Consensus 79 ~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 152 (486)
T 3pqa_A 79 ILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIA 152 (486)
T ss_dssp HHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHH
Confidence 99999999999995 799999999999999988864432 3322 35678999999999999999999999999999
Q ss_pred HHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHH
Q 013608 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (439)
Q Consensus 211 ~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~ 287 (439)
+||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|++.
T Consensus 153 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~ 232 (486)
T 3pqa_A 153 PAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKK 232 (486)
T ss_dssp HHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999976 56899987 89999999999999999999
Q ss_pred hhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCC
Q 013608 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (439)
Q Consensus 288 aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~ 367 (439)
++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 233 aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 310 (486)
T 3pqa_A 233 AG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDE 310 (486)
T ss_dssp CC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred cC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcC
Confidence 88 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 368 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
++++|||+++.++++++++|++++++||++++||.+ .|+|++|||+ +++++|++++||+||||+
T Consensus 311 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl 374 (486)
T 3pqa_A 311 KTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR-------DKALFYPTIL-EVDRDNILCKTETFAPVI 374 (486)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEE-ECCTTSGGGTCCCCSSEE
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCcEeccEEE-eCCCCChhhcccccccEE
Confidence 999999999999999999999999999999999972 5899999999 999999999999999985
No 19
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=5.3e-82 Score=658.38 Aligned_cols=382 Identities=25% Similarity=0.387 Sum_probs=354.6
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (439)
..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (439)
Q Consensus 129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~ 208 (439)
++++++|+||+..++. .|+..+++.++|++++++++... ..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 107 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 182 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182 (515)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhh
Confidence 9999999999999996 89999999999999988876542 22221 12345788999999999999999999999999
Q ss_pred HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (439)
Q Consensus 209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~ 285 (439)
+++||++||+||+|||+.+|+++..+++++++ +|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|+
T Consensus 183 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~ 258 (515)
T 2d4e_A 183 IAPALAFGNTVVLKPAEWSPFTATKLAEILKE----ADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM 258 (515)
T ss_dssp HHHHHHTTCCEEEECCTTSCHHHHHHHHHHHH----TTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhHHHHcCCeeeecCCCCcHHHHHHHHHHHHH----hCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 99999999999999999999999988888765 899999999999964 67889987 899999999999999999
Q ss_pred HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (439)
Q Consensus 286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~ 365 (439)
+.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus 259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 338 (515)
T 2d4e_A 259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPL 338 (515)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH----LSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~----~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
++++++|||+++.++++++++|++++++||++++||.... ++....|+|++|||+.+ +++|++++||+||||+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl 415 (515)
T 2d4e_A 339 DPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVL 415 (515)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEE
T ss_pred cccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCce
Confidence 9999999999999999999999999999999999998532 11123699999999999 9999999999999985
No 20
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-82 Score=661.81 Aligned_cols=381 Identities=28% Similarity=0.404 Sum_probs=357.0
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHHHHh
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEH 124 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~l~~~l~~~ 124 (439)
..++||+|+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| ..|+.++..+|.++|+++++.|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 45689999999988889999999999 99999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (439)
Q Consensus 125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~ 204 (439)
+++|++++++|+||+..++ .+|+..+++.++|++++++++.. +..+... .+...+++++|+|||++|+|||||+..
T Consensus 102 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~ 177 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEG-QTHNNIG--DDRLGLVLREPVGVVGIITPWNFPFII 177 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCE-EEECCSC--TTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-eeeccCC--CCceeEEEeccceEEEEECCCccHHHH
Confidence 9999999999999999999 78999999999999999887643 2233221 235678999999999999999999999
Q ss_pred hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (439)
Q Consensus 205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~ 281 (439)
.++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|
T Consensus 178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 253 (528)
T 3u4j_A 178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELARE----AGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVG 253 (528)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHH----HTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHH----hCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHH
Confidence 999999999999999999999999999988888765 799999999999954 78899998 89999999999999
Q ss_pred HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (439)
Q Consensus 282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~ 361 (439)
+.|++.++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 254 ~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 333 (528)
T 3u4j_A 254 TKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAF 333 (528)
T ss_dssp HHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+|.++++++||++++.++++++++|++++++||++++||.+... ..|+|++|||+.+++++|++++||+||||+
T Consensus 334 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~---~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 408 (528)
T 3u4j_A 334 GDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGR---EAGLYYAPTVFAGVTPDMSIAREEIFGPVL 408 (528)
T ss_dssp ECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECT---TTSCEECCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC---CCCcEecceEEecCCCCCccccceeeccEE
Confidence 999999999999999999999999999999999999999985321 279999999999999999999999999985
No 21
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=5.9e-82 Score=656.07 Aligned_cols=375 Identities=30% Similarity=0.438 Sum_probs=350.0
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (439)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+.++..+|.++|+++++.|++|+++|
T Consensus 12 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 91 (505)
T 3prl_A 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEII 91 (505)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccc---cccceeEEEeeccEEEEEcCCCcchhhh
Q 013608 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (439)
Q Consensus 129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~PlGVv~~i~p~N~P~~~~ 205 (439)
++++++|+||+..++. +|+..+++.++|++++++++.... .+..... .....+++++|+|||++|+|||||+...
T Consensus 92 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 92 GELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 9999999999999995 699999999999999988764422 2211000 0345788999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 245 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALAD----AGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE 245 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----hCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 99999999999999999999999999887776654 999999999999964 78899987 899999999999999
Q ss_pred HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (439)
Q Consensus 283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G 362 (439)
.|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999998 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+|. +++++|||+++.++++++++|++++++||++++||. ..|+|++|||+.+++++|++++||+||||+
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 392 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVL 392 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEE
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEE
Confidence 999 999999999999999999999999999999999997 368999999999999999999999999985
No 22
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=7.2e-82 Score=653.14 Aligned_cols=379 Identities=28% Similarity=0.421 Sum_probs=354.7
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (439)
..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI 86 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (439)
Q Consensus 129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~ 208 (439)
++++++|+||+..++. .|+..+++.++|++++++++..+.. +.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 87 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 87 SALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999985 8999999999999998887655432 221 12346789999999999999999999999999
Q ss_pred HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (439)
Q Consensus 209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~ 285 (439)
+++||++||+||+|||+.+|+++..+++++++ +|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|+
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHH----hCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999998888765 899999999999965 57888987 899999999999999999
Q ss_pred HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (439)
Q Consensus 286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~ 365 (439)
+.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus 239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 318 (479)
T 2imp_A 239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318 (479)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 366 A-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 366 ~-~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+ +++++|||+++.++++++++|++++++||++++||...+ ..|+|++|||+.+++++|++++||+||||+
T Consensus 319 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl 389 (479)
T 2imp_A 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE----GKGYYYPPTLLLDVRQEMSIMHEETFGPVL 389 (479)
T ss_dssp TCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCC----SSSCCCCCEEEESCCTTSGGGGSCCCSSEE
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCceECCEEEeCCCCCCHHHhCccCCceE
Confidence 9 899999999999999999999999999999999998521 368999999999999999999999999985
No 23
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.1e-81 Score=651.99 Aligned_cols=379 Identities=27% Similarity=0.458 Sum_probs=354.1
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (439)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 10 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 89 (481)
T 3jz4_A 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDL 89 (481)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (439)
Q Consensus 129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~ 208 (439)
++++++|+||+..++ ..|+..+++.++|++....+.... ..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 90 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 90 ARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGD-TIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 999999999999998 479999999999999887654322 22211 12356789999999999999999999999999
Q ss_pred HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (439)
Q Consensus 209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~ 285 (439)
+++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|+
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~----aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~ 241 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIR----AGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999988877665 899999999999964 78899988 899999999999999999
Q ss_pred HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (439)
Q Consensus 286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~ 365 (439)
+.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus 242 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 321 (481)
T 3jz4_A 242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGL 321 (481)
T ss_dssp HHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTT
T ss_pred HHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
++++++|||+++.++++++++|++++++||++++||... ...|+|++|||+.+++++|++++||+||||+
T Consensus 322 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl 391 (481)
T 3jz4_A 322 DNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLA 391 (481)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEE
T ss_pred cCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceE
Confidence 999999999999999999999999999999999999853 2468999999999999999999999999985
No 24
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=9.7e-82 Score=654.28 Aligned_cols=384 Identities=28% Similarity=0.411 Sum_probs=357.7
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (439)
..++||+|+|+.+.++++++++||+||+.+++++.++.+|+++++++|++||..|+.++..+|.++|+++++.|++|+++
T Consensus 6 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 85 (490)
T 2ve5_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (439)
Q Consensus 128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~ 207 (439)
|++++++|+||+..+++..|+..+++.++|++++..++. ....+.. .....+++++|+|||++|+|||||+...++
T Consensus 86 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~-~~~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 161 (490)
T 2ve5_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIE-GEQIPLR---ETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCC-EEEEEEE---TTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhc-CccccCC---CCceeeEeeccccEEEEECCCcchHHHHHH
Confidence 999999999999999965599999999999999887653 2222211 345678999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMI 284 (439)
Q Consensus 208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v 284 (439)
++++||++||+||+|||+.+|+++..+++++++ +|+|+|++|+|+|. .+.++.|++ .+|+|+||||+.+|+.|
T Consensus 162 ~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i 237 (490)
T 2ve5_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTE----AGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKV 237 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----hCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHH
Confidence 999999999999999999999999988888766 79999999999995 478899988 79999999999999999
Q ss_pred HHHh-hccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCC
Q 013608 285 MRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (439)
Q Consensus 285 ~~~a-a~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~ 363 (439)
++.+ +++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+
T Consensus 238 ~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 238 MASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|.++++++|||+++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+||||+
T Consensus 318 p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl 393 (490)
T 2ve5_A 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVM 393 (490)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeE
Confidence 9999999999999999999999999999999999999986432223579999999999999999999999999985
No 25
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=4.8e-82 Score=655.30 Aligned_cols=381 Identities=24% Similarity=0.370 Sum_probs=352.4
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 013608 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (439)
Q Consensus 45 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~ 124 (439)
.+....+||+|+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|
T Consensus 20 ~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (495)
T 1wnd_A 20 GLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEEN 98 (495)
T ss_dssp --CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 334456899999998766 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (439)
Q Consensus 125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~ 204 (439)
+++|++++++|+||+..++...|+..+++.++|++++++++.. +..+.. ..+...+++++|+|||++|+|||||+..
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (495)
T 1wnd_A 99 GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG-LAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMM 175 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEE-ECBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccccCC--CCCceeEEeeecCCeEEEECCCcchHHH
Confidence 9999999999999999998544999999999999999887643 222211 1233568899999999999999999999
Q ss_pred hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHH
Q 013608 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG 281 (439)
Q Consensus 205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~ 281 (439)
.++++++||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|+|. .+.++.|++ ++|+|+||||+.+|
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----a-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD----I-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT----T-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHH----h-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 999999999999999999999999999998888765 6 999999999995 478999998 79999999999999
Q ss_pred HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (439)
Q Consensus 282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~ 361 (439)
+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 251 ~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 330 (495)
T 1wnd_A 251 EHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKS 330 (495)
T ss_dssp HHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCC-CEEEeCCC-CCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~~l~gG~-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+|.++++++|||+++.++++++++|++++++| |++++||. .. ..|+|++|||+.+++++|++++||+||||+
T Consensus 331 g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 405 (495)
T 1wnd_A 331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVV 405 (495)
T ss_dssp CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred CCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceE
Confidence 999999999999999999999999999999999 99999997 42 269999999999999999999999999985
No 26
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.6e-81 Score=656.94 Aligned_cols=377 Identities=21% Similarity=0.370 Sum_probs=353.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~ 126 (439)
...+||+|+|+. ++++++++||+| |+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKH 114 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 456899999987 578999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (439)
Q Consensus 127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~ 206 (439)
+|++++++|+||+..++. .|+..+++.++|+++++.+++.++..+.. .+...+++++|+|||++|+|||||+...+
T Consensus 115 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 190 (538)
T 3qan_A 115 EFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMV 190 (538)
T ss_dssp HHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHH
Confidence 999999999999999995 69999999999999985555555554432 24568899999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (439)
Q Consensus 207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~ 283 (439)
+++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.
T Consensus 191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~ 266 (538)
T 3qan_A 191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLED----AGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVR 266 (538)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH----TTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHH----hCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 9999999999999999999999999988877665 899999999999965 78999987 8999999999999999
Q ss_pred HHHHhhcc------CCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHH
Q 013608 284 IMRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (439)
Q Consensus 284 v~~~aa~~------l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~ 357 (439)
|++.++++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++
T Consensus 267 i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 346 (538)
T 3qan_A 267 LYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAK 346 (538)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHT
T ss_pred HHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHH
Confidence 99999998 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcccc
Q 013608 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILW 437 (439)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgP 437 (439)
++++|+|.++++++|||+++.++++++++|++++++| ++++||.... ..|+|++|||+.+++++|++++||+|||
T Consensus 347 ~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGP 421 (538)
T 3qan_A 347 NLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDS----STGFFIQPTIIADLDPEAVIMQEEIFGP 421 (538)
T ss_dssp TCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEEC----SSSCEECCEEEESCCTTSHHHHSCCCSS
T ss_pred hccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCC----CCCceeCCeeeecCCCCChhhCCCcCCc
Confidence 9999999999999999999999999999999999999 9999998521 2799999999999999999999999999
Q ss_pred CC
Q 013608 438 VS 439 (439)
Q Consensus 438 v~ 439 (439)
|+
T Consensus 422 Vl 423 (538)
T 3qan_A 422 VV 423 (538)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 27
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3.5e-81 Score=648.46 Aligned_cols=376 Identities=27% Similarity=0.437 Sum_probs=350.3
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (439)
..+||+|+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++|+++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999864 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (439)
Q Consensus 129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~ 208 (439)
++++++|+||+..++. .|+..+++.++|+++++++.. .+..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 91 a~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~-g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (487)
T 2w8n_A 91 ARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY-GDIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRK 166 (487)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCC-CEEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc-CcccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 9999999999999995 699999999999999887743 3322221 12346788999999999999999999999999
Q ss_pred HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEe---CCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT---GFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~---~~~-~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
+++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+ |.+ +.++.|++ ++|+|+||||+.+|+
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~ 242 (487)
T 2w8n_A 167 VGAALAAGCTVVVKPAEDTPFSALALAELASQ----AGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK 242 (487)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHHHH----HTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----hCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 99999999999999999999999988887665 899999999999 743 67888987 799999999999999
Q ss_pred HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh-Ccc
Q 013608 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA 361 (439)
Q Consensus 283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~-l~~ 361 (439)
.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++ +++
T Consensus 243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~ 322 (487)
T 2w8n_A 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV 322 (487)
T ss_dssp HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCc-eeccEEEecCCCCCcccccCccccCC
Q 013608 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~-~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+|.++++++|||+++.++++++++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||+
T Consensus 323 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-----~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl 396 (487)
T 2w8n_A 323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-----QLGKNFFEPTLLCNVTQDMLCTHEETFGPLA 396 (487)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-----TTCTTCBCCEEEEEECGGGGTTCTTCCSSEE
T ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-----CCCCceECCEEEecCCCcchhhhcccccceE
Confidence 9999999999999999999999999999999999999999842 3688 99999999999999999999999985
No 28
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-80 Score=648.21 Aligned_cols=378 Identities=26% Similarity=0.335 Sum_probs=353.5
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (439)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~ 126 (439)
+.+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 90 (508)
T 3r64_A 11 DATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHRE 90 (508)
T ss_dssp CTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHH
Confidence 34568999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (439)
Q Consensus 127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~ 206 (439)
+|++++++|+||+..++. .|+..+++.++|++++.++... ..+.. ...+...+++++|+|||++|+|||||+...+
T Consensus 91 ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 166 (508)
T 3r64_A 91 EIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSI 166 (508)
T ss_dssp HHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHH
Confidence 999999999999999995 6999999999999988775433 22211 0123567899999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEecCCCchHHH-HHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHH
Q 013608 207 NPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 207 ~~i~~AL~aGN~VVlKps~~~~~s~-~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
+++++||++||+||+|||+.+|+++ ..+.+++ .++|+|+|++|+++|+ .+.++.|++ ++|+|+||||+.+|+
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~ 242 (508)
T 3r64_A 167 RSVAPALAVGNAVVIKPASDTPVTGGVIPARIF----EEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGR 242 (508)
T ss_dssp HHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHH----HTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHH
T ss_pred HHHHHHHhcCCEEEEECCCCChHHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHH
Confidence 9999999999999999999999999 8777665 4599999999999997 578999998 899999999999999
Q ss_pred HHHHHhhc--cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608 283 MIMRNASK--TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (439)
Q Consensus 283 ~v~~~aa~--~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~ 360 (439)
.|++.+++ +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus 243 ~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (508)
T 3r64_A 243 RVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIP 322 (508)
T ss_dssp HHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 99999998 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+|+|.++++++|||+++.++++++++|++++++||++++||.+ .|+|++|||+.+++++|++++||+||||+
T Consensus 323 ~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl 394 (508)
T 3r64_A 323 TGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLI 394 (508)
T ss_dssp BSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEE
T ss_pred CCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceE
Confidence 9999999999999999999999999999999999999999982 68999999999999999999999999985
No 29
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=9.2e-81 Score=643.99 Aligned_cols=361 Identities=23% Similarity=0.376 Sum_probs=341.9
Q ss_pred eEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 013608 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS 144 (439)
Q Consensus 65 ~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~ 144 (439)
+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred hhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecC
Q 013608 145 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (439)
Q Consensus 145 ~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps 224 (439)
+|+..+++.++|++++++++..+..... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 159 (484)
T 3ros_A 85 -EEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA 159 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 8999999999999999998876654332 23568899999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCC
Q 013608 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (439)
Q Consensus 225 ~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgG 301 (439)
+.+|+++..+++++.+ +|+|+|++|+|+|+++ .++ |++ ++|+|+||||+.+|+.|++.++++++|+++||||
T Consensus 160 ~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGG 234 (484)
T 3ros_A 160 HNVPGSAALTAKIIKR----AGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGG 234 (484)
T ss_dssp TTCHHHHHHHHHHHHH----HTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCChHHHHHHHHHHHH----hCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCC
Confidence 9999999988887765 8999999999999764 566 887 8999999999999999999999999999999999
Q ss_pred CceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHH
Q 013608 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (439)
Q Consensus 302 k~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~ 381 (439)
|||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus 235 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 314 (484)
T 3ros_A 235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKE 314 (484)
T ss_dssp CCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 382 ~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+++++|++++++||++++||.+. ...|+|++|||+.+++++|++++||+||||+
T Consensus 315 rv~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 368 (484)
T 3ros_A 315 KLEAQVKEAIDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIA 368 (484)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEE
T ss_pred HHHHHHHHHHHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceE
Confidence 99999999999999999999853 2579999999999999999999999999985
No 30
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.4e-80 Score=645.74 Aligned_cols=375 Identities=23% Similarity=0.350 Sum_probs=349.4
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQE 126 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~l~~~l~~~~~ 126 (439)
.+.+||+|+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 34689999999874 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCcccc--ccceeEEEeeccEEEEEcCCCcchhh
Q 013608 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHN 204 (439)
Q Consensus 127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~PlGVv~~i~p~N~P~~~ 204 (439)
+|++++++|+||+..++. .|+..+++.++|++++++++.. +..+...... ....+++++|+|||++|+|||||+..
T Consensus 96 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 999999999999999996 8999999999999999887643 2222211011 23578999999999999999999999
Q ss_pred hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHH
Q 013608 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282 (439)
Q Consensus 205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~ 282 (439)
.++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|+++.++.|++ ++|+|+||||+.+|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~ 249 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLD----AGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGE 249 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHH----hCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence 999999999999999999999999999988888765 89999999999997777888987 899999999999999
Q ss_pred HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (439)
Q Consensus 283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G 362 (439)
.|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 250 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 327 (501)
T 1uxt_A 250 RVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG 327 (501)
T ss_dssp HHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCC
Confidence 9999988 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCC-ceeccEEEecCC---CCCcccccCccccC
Q 013608 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEIILWV 438 (439)
Q Consensus 363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g-~~~~PTvl~~v~---~~~~i~~~E~FgPv 438 (439)
+|.++++++|||+++.++++++++|++++++||++++||.. .| +|++|||+.+++ ++|++++||+||||
T Consensus 328 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPV 400 (501)
T 1uxt_A 328 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPV 400 (501)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSE
T ss_pred CccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCce
Confidence 99999999999999999999999999999999999999983 57 999999999999 99999999999998
Q ss_pred C
Q 013608 439 S 439 (439)
Q Consensus 439 ~ 439 (439)
+
T Consensus 401 l 401 (501)
T 1uxt_A 401 A 401 (501)
T ss_dssp E
T ss_pred E
Confidence 5
No 31
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=9e-81 Score=645.66 Aligned_cols=379 Identities=22% Similarity=0.320 Sum_probs=351.0
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (439)
..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999998877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (439)
Q Consensus 129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~ 208 (439)
++++++|+||+..++ .+|+..+++.++|++...+. +..+..+.. ..+...+++++|+|||++|+|||||+...+++
T Consensus 86 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~-~~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 86 AHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSL-MMGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHHHH-HCEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHH-hcCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 999999999999998 48999999999998865443 333222210 12345688999999999999999999999999
Q ss_pred HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHH
Q 013608 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (439)
Q Consensus 209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~ 286 (439)
+++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~ 237 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEK----AGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYK 237 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHH----TTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----hCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999988888765 89999999999997788899988 7999999999999999999
Q ss_pred HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCce-eEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (439)
Q Consensus 287 ~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~-v~V~~~i~d~f~~~L~~~~~~l~~G~~~ 365 (439)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++| +|||++ ||+|+++|.++++++++|+|.
T Consensus 238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~ 316 (486)
T 1t90_A 238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL 316 (486)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999 999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
++++++||++++.++++++++|++++++||++++||.+.. .+.|+|++|||+.+++++|++++||+||||+
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~---~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl 387 (486)
T 1t90_A 317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV---SDDGYFVGPTIFDNVTTEMTIWKDEIFAPVL 387 (486)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSC---CSSSSCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred ccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC---CCCCCEECCEEEeCCCCCCHhhcCcccCceE
Confidence 9999999999999999999999999999999999997531 2469999999999999999999999999985
No 32
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.4e-80 Score=644.90 Aligned_cols=378 Identities=25% Similarity=0.361 Sum_probs=349.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (439)
.+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDD 85 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (439)
Q Consensus 128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~ 207 (439)
|++++++|+||+..++. .|+..+++.++|+++..++. .....+.. ...+...+++++|+|||++|+|||||+...++
T Consensus 86 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~-~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 86 IIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGEL-GGVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGC-SCEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-CCeecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999995 59999999999999988753 33332211 01235678999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEecCCCchHHH-HHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608 208 PMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (439)
Q Consensus 208 ~i~~AL~aGN~VVlKps~~~~~s~-~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~ 283 (439)
++++||++||+||+|||+.+|+++ ..+.+++. ++|+|+|++|+++|++ +.++.|++ ++|+|.||||+.+|+.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~ 238 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFE----HAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRH 238 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHH----HTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----HhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHH
Confidence 999999999999999999999999 87766655 5999999999999976 57889988 8999999999999999
Q ss_pred HHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCC
Q 013608 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (439)
Q Consensus 284 v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~ 363 (439)
|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+
T Consensus 239 i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 318 (485)
T 4dng_A 239 IGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGD 318 (485)
T ss_dssp HHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|.++++++||++++.++++++++|++++++||++++||.+ .|+|++|||+.+++++|++++||+||||+
T Consensus 319 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl 387 (485)
T 4dng_A 319 QTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIA 387 (485)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEE
T ss_pred CCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceE
Confidence 9999999999999999999999999999999999999982 69999999999999999999999999985
No 33
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=8.1e-81 Score=645.46 Aligned_cols=379 Identities=25% Similarity=0.377 Sum_probs=353.9
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (439)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35689999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (439)
Q Consensus 128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~ 207 (439)
|++++++|+||+..++...|+..+++.++|+++.+.++.... .....+++++|+|||++|+|||||+...++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 158 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSL 158 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHH
Confidence 999999999999999967899999999999999888765432 123578899999999999999999999999
Q ss_pred HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (439)
Q Consensus 208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v 284 (439)
++++||++||+||+|||+.+|+++..+++++++ +|+|+|++|+++|++ +.++.|+. ++|+|+||||+.+|+.|
T Consensus 159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i 234 (478)
T 3ty7_A 159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIFDK----VGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKI 234 (478)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHH----HTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC-
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHHHHHHHH----hCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 999999999999999999999999988887765 899999999999965 78899987 89999999999999999
Q ss_pred HHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCC
Q 013608 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (439)
Q Consensus 285 ~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~ 364 (439)
++.++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 235 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 314 (478)
T 3ty7_A 235 MEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP 314 (478)
T ss_dssp -CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
.++++++|||+++.++++++++|++++++||++++||.... .....|+|++|||+.+++++|++++||+||||+
T Consensus 315 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl 388 (478)
T 3ty7_A 315 REDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVM 388 (478)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECcee
Confidence 99999999999999999999999999999999999995321 113579999999999999999999999999985
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=2.3e-80 Score=646.58 Aligned_cols=376 Identities=24% Similarity=0.350 Sum_probs=349.3
Q ss_pred cccccCCcccCCCCCCeEEeecCC-CCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (439)
..+||+|+|+.+ +++++++||+ ||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457999999864 5789999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (439)
Q Consensus 128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~ 207 (439)
|++++++|+||+..++. .|+..+++.++|++++++++..+...... ..+...+++++|+|||++|+|||||+...++
T Consensus 116 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 99999999999999995 79999999999999998887654321111 1234678899999999999999999999999
Q ss_pred HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (439)
Q Consensus 208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v 284 (439)
++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|.+ +.++.|++ ++|+|+||||+.+|+.|
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i 268 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHE----AGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH----HTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHH----hCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHH
Confidence 999999999999999999999999988887765 899999999999954 78899998 79999999999999999
Q ss_pred HHHhh------ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh
Q 013608 285 MRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (439)
Q Consensus 285 ~~~aa------~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~ 358 (439)
++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++
T Consensus 269 ~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 348 (516)
T 1uzb_A 269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAER 348 (516)
T ss_dssp HHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred HHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHh
Confidence 99998 889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccC
Q 013608 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWV 438 (439)
Q Consensus 359 l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv 438 (439)
+++|+| ++++++|||+++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||
T Consensus 349 ~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPV 422 (516)
T 1uzb_A 349 LSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPV 422 (516)
T ss_dssp CCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSE
T ss_pred ccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCce
Confidence 999999 99999999999999999999999999999 999999742 136999999999999999999999999998
Q ss_pred C
Q 013608 439 S 439 (439)
Q Consensus 439 ~ 439 (439)
+
T Consensus 423 l 423 (516)
T 1uzb_A 423 L 423 (516)
T ss_dssp E
T ss_pred E
Confidence 5
No 35
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=4.7e-80 Score=638.96 Aligned_cols=371 Identities=30% Similarity=0.432 Sum_probs=346.5
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (439)
..+||+|+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999998754 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccc----cce-eEEEeeccEEEEEcCCCcchh
Q 013608 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFH 203 (439)
Q Consensus 129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~----~~~-~~~~~PlGVv~~i~p~N~P~~ 203 (439)
++++++|+||+..++ ..|+..+++.++|++++++++.... .+.. ..+ ... +++++|+|||++|+|||||+.
T Consensus 83 a~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 83 GAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 999999999999998 5799999999999999888765432 1211 112 345 889999999999999999999
Q ss_pred hhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHH
Q 013608 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (439)
Q Consensus 204 ~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~ 280 (439)
..++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~ 234 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE----AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGI 234 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH----HTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHH----hCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHH
Confidence 9999999999999999999999999999988888765 899999999999975 57888987 7999999999999
Q ss_pred HHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (439)
Q Consensus 281 ~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~ 360 (439)
|+.|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus 235 g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 312 (475)
T 1euh_A 235 GERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312 (475)
T ss_dssp HHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 999999988 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+|+|.+ ++++|||+++.++++++++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||+
T Consensus 313 ~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl 383 (475)
T 1euh_A 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVL 383 (475)
T ss_dssp BSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEE
T ss_pred CCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceE
Confidence 999999 999999999999999999999999999999999982 58999999999999999999999999985
No 36
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.7e-79 Score=636.77 Aligned_cols=375 Identities=21% Similarity=0.301 Sum_probs=349.8
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (439)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la 129 (439)
++||+|+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+++|+
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999874 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (439)
Q Consensus 130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i 209 (439)
+++++|+||+..++. .|+..+++.++|+++..+++......+ ......+++++|+|||++|+|||||+...++++
T Consensus 86 ~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (490)
T 3ju8_A 86 RVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHI 160 (490)
T ss_dssp HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHH
Confidence 999999999999995 799999999999998877654433211 122456778999999999999999999999999
Q ss_pred HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHH
Q 013608 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (439)
Q Consensus 210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~ 287 (439)
++||++||+||+|||+.+|+++.++++++.+ +|+|+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|++.
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 236 (490)
T 3ju8_A 161 VPALLAGNCVVFKPSELTPKVAELTLKAWIQ----AGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQ 236 (490)
T ss_dssp HHHHHHTCEEEEECCTTCHHHHHHHHHHHHH----TTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999988877665 89999999999997788999998 89999999999999999999
Q ss_pred hhccCCce-EEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhh-HHHHHHHHHHHHHhCccCC-C
Q 013608 288 ASKTLTPV-TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-P 364 (439)
Q Consensus 288 aa~~l~pv-~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i-~d~f~~~L~~~~~~l~~G~-~ 364 (439)
++++++|+ ++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|.++++++++|+ |
T Consensus 237 aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~ 316 (490)
T 3ju8_A 237 FGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFD 316 (490)
T ss_dssp TTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred hhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCC
Confidence 99999998 7999999999999999999999999999999999999999999999996 9999999999999999999 9
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 365 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
.++++++|||+++.++++++++|++++++||++++||.+.+ ..|+|++|||+. ++++|++++||+||||+
T Consensus 317 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl 386 (490)
T 3ju8_A 317 EQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPI----DGAALLTPGILD-VSAVAERPDEEFFGPLL 386 (490)
T ss_dssp CSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCS----TTSCCCCCEEEE-CTTCSSCCCCCCCSSEE
T ss_pred CCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCCEEccEEEE-eCCCCccccccccccEE
Confidence 99999999999999999999999999999999999998532 579999999998 99999999999999985
No 37
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=2.4e-79 Score=633.47 Aligned_cols=368 Identities=24% Similarity=0.352 Sum_probs=343.4
Q ss_pred CCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 013608 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (439)
Q Consensus 61 ~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~ 140 (439)
.+.++++++||+||+++++++.++++|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+||+.
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS 82 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEE
Q 013608 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220 (439)
Q Consensus 141 ~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VV 220 (439)
.+ ..|+..+++.+++++....+++.....+... .+...+.+++|+|||++|+|||||+...++++++||++||+||
T Consensus 83 ~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 83 IT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred HH--HHHHHHHHHHHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 44 3699999999999999888877665544331 2345667889999999999999999999999999999999999
Q ss_pred EecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHhCcCEEEEeCChHHHHHHHHHhhccCCceEEEcC
Q 013608 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (439)
Q Consensus 221 lKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelg 300 (439)
+|||+.+|+++..+.+++ .++|+|+|++|+++|+.+.+..|+..+|+|.||||+.+|+.|++.++++++|+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~----~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMAL----NTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHH----TTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhh----hhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCC
Confidence 999999999998776665 4599999999999998899999998999999999999999999999999999999999
Q ss_pred CCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHH
Q 013608 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (439)
Q Consensus 301 Gk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~ 380 (439)
||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 381 ~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+++++++++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||+
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~---~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl 370 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEE---LGGGWWCRPTVMTNVNHSMKVMTEETFGPIM 370 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEE---ETTEEECCCEEEESCCTTSGGGTSCCCSSEE
T ss_pred HHHHHHHHHHHhhCceeccCCcccc---cCCCcccCceeEEeeccccccccccccCcEE
Confidence 9999999999999999999998532 3579999999999999999999999999985
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.8e-78 Score=625.62 Aligned_cols=365 Identities=26% Similarity=0.452 Sum_probs=343.3
Q ss_pred CCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 013608 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (439)
Q Consensus 62 ~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~ 141 (439)
+..+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEE
Q 013608 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (439)
Q Consensus 142 ~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVl 221 (439)
+++ .|+..+++.++|+++..+++..+.... ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus 85 ~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl 159 (462)
T 3etf_A 85 QAR-AEVTKSAALCDWYAEHGPAMLNPEPTL----VENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLL 159 (462)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTSCEECS----SGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHhHHHhcCCcccC----CCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 985 799999999999999988776554211 134567899999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEc
Q 013608 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299 (439)
Q Consensus 222 Kps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lel 299 (439)
|||+.+|+++..+.+++.+ +|+|+|++|+++|+++.++.|++ ++|+|+||||+.+|+.|++.++++++|+++|+
T Consensus 160 Kps~~tp~~~~~l~~~l~~----aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lEl 235 (462)
T 3etf_A 160 KHAPNVTGCAQMIARILAE----AGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLEL 235 (462)
T ss_dssp ECCTTCHHHHHHHHHHHHH----TTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ECCCCCcHHHHHHHHHHHH----hCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEc
Confidence 9999999999887777554 99999999999998888888987 89999999999999999999999999999999
Q ss_pred CCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHH
Q 013608 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379 (439)
Q Consensus 300 gGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~ 379 (439)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++|||+++.+
T Consensus 236 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~ 315 (462)
T 3etf_A 236 GGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDL 315 (462)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 380 ~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+++++++|++++++||++++||.+.. ..|+|++|||+.+++++|++++||+||||+
T Consensus 316 ~~~v~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl 371 (462)
T 3etf_A 316 RDELHQQVQASVAEGARLLLGGEKIA----GEGNYYAATVLADVTPDMTAFRQELFGPVA 371 (462)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCcccC----CCCcEEeeEEEECCCCCChhhcCceeCcEE
Confidence 99999999999999999999998532 469999999999999999999999999985
No 39
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2.2e-78 Score=634.71 Aligned_cols=379 Identities=19% Similarity=0.224 Sum_probs=347.4
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh-
Q 013608 47 DNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH- 124 (439)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~- 124 (439)
..+.+||+|+|+.+. ..+.++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~ 139 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPR 139 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 456699999999864 4678999998 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (439)
Q Consensus 125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~ 204 (439)
+++|++++++|+||+..++...|+..+++.++|+++.++++......... .....+.+++|+|||++|+|||||+..
T Consensus 140 ~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~ 216 (563)
T 4e3x_A 140 RAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIG 216 (563)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHH
Confidence 99999999999999999996544999999999999998887654322221 123345667778999999999999999
Q ss_pred hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (439)
Q Consensus 205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~ 281 (439)
..+++++|| +||+||+|||+.+|+++..+++++++ +|+|+|++|+|+|++ +.++.|++ ++++|.||||+.+|
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~e----AGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG 291 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILRE----AGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTF 291 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHH----hCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHH
Confidence 999999999 69999999999999999988887665 899999999999976 57899987 99999999999999
Q ss_pred HHHHHHhhccCCc------eEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHH
Q 013608 282 RMIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355 (439)
Q Consensus 282 ~~v~~~aa~~l~p------v~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~ 355 (439)
+.|++.++++++| +++|||||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|.++
T Consensus 292 ~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~ 371 (563)
T 4e3x_A 292 KHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEE 371 (563)
T ss_dssp HHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHH
Confidence 9999999999985 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-CCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccC
Q 013608 356 VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433 (439)
Q Consensus 356 ~~~l~~G~~-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E 433 (439)
++++++|+| .++++++||+|++.++++++++|+++++ +||++++||... ...|+|++|||+.+++++|++++||
T Consensus 372 ~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eE 447 (563)
T 4e3x_A 372 HSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEE 447 (563)
T ss_dssp HHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSC
T ss_pred HHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCC
Confidence 999999999 9999999999999999999999999996 899999999842 2479999999999999999999999
Q ss_pred ccccCC
Q 013608 434 IILWVS 439 (439)
Q Consensus 434 ~FgPv~ 439 (439)
+||||+
T Consensus 448 iFGPVl 453 (563)
T 4e3x_A 448 IFGPVL 453 (563)
T ss_dssp CCSSEE
T ss_pred CcCeEE
Confidence 999985
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=6e-77 Score=623.70 Aligned_cols=381 Identities=17% Similarity=0.210 Sum_probs=338.0
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (439)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (439)
..+||+|+|+.+.+ .+++++||+||+++++++.++ +|+++++++|++| |+.|+.++..+|.++|+++++.|++|+++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999997754 579999999999999999998 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcC------CcccCCCccccccceeEEEeec-cEEEEEcCCCc
Q 013608 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNY 200 (439)
Q Consensus 128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~------~~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~N~ 200 (439)
|++++++|+||+..++. .|+..+++.++|++..+++... ++..+... ......++.++|+ |||++|+||||
T Consensus 86 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~ 163 (534)
T 2y53_A 86 YYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNF 163 (534)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTC
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCch
Confidence 99999999999999985 6999999999999987755422 11111110 0111357889997 99999999999
Q ss_pred chhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcC-CCCCcEEEEeCChh-hHHHHHhCcCEEEEeCCh
Q 013608 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAE-TGEALVSSVDKIIFVGSP 278 (439)
Q Consensus 201 P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG-~p~~~v~~v~~~~~-~~~~L~~~v~~v~f~Gs~ 278 (439)
|++..++++++||++||+||+|||+.+|+++..+++++.+ +| +|+|++|+|+|+.+ .++.| ..+|+|+||||+
T Consensus 164 P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~----aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~ 238 (534)
T 2y53_A 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVD----AGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSA 238 (534)
T ss_dssp TTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHH----HTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----hCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCH
Confidence 9999999999999999999999999999999988887765 89 79999999998653 22222 278999999999
Q ss_pred HHHHHHHHHhh--ccCCceEEEcCCCceEEecCCC-----CHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHH
Q 013608 279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351 (439)
Q Consensus 279 ~~~~~v~~~aa--~~l~pv~lelgGk~~~iV~~da-----Dl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~ 351 (439)
.+|+.|++.++ ++++|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999999875 8999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC--CCCCCCceeccEEEecCCCC--C
Q 013608 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--M 427 (439)
Q Consensus 352 L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~--~~~~~g~~~~PTvl~~v~~~--~ 427 (439)
|.++++++++|+|.++++++|||+++.++++++++|+++ ++||++++||..... +....|+|++|||+.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 689999999974311 11236999999999999987 6
Q ss_pred cccccCccccCC
Q 013608 428 KLMQEEIILWVS 439 (439)
Q Consensus 428 ~i~~~E~FgPv~ 439 (439)
++++||+||||+
T Consensus 398 ~i~~eEiFGPVl 409 (534)
T 2y53_A 398 LLHDVEVFGPVA 409 (534)
T ss_dssp STTTCCCSSSEE
T ss_pred HHHhCCCcCCEE
Confidence 999999999985
No 41
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=6.1e-76 Score=648.06 Aligned_cols=377 Identities=21% Similarity=0.335 Sum_probs=351.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (439)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~ 126 (439)
...+||+|+|+.+ +++++++||+| |+++++++.++.+|+++++++|++||..|+.+|+.+|.++|+++++.|+++++
T Consensus 531 ~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~ 608 (1026)
T 4f9i_A 531 TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF 608 (1026)
T ss_dssp EECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999874 67899999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (439)
Q Consensus 127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~ 206 (439)
+|++++++|+||+..++ ..|+..+++.++|++..++++..+...... .+..+++.++|+|||++|+|||||+...+
T Consensus 609 eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~---~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 609 ELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHA---PGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp HHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCC---TTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCC---CCccceeEeecCceEEEeCCCccHHHHHH
Confidence 99999999999999999 479999999999999998887554332211 34567889999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (439)
Q Consensus 207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~ 283 (439)
+++++||++||+||+|||+.+|+++..+++++++ +|+|+|++|+|+|++ +.++.|++ .+++|+||||+.+|+.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~e----AGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~ 760 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFRE----AGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLR 760 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHH----hCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHH
Confidence 9999999999999999999999999988887665 899999999999976 67899998 8999999999999999
Q ss_pred HHHHhh------ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHH
Q 013608 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (439)
Q Consensus 284 v~~~aa------~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~ 357 (439)
|++.++ ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|+++++
T Consensus 761 I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~ 840 (1026)
T 4f9i_A 761 IIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840 (1026)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHH
Confidence 999998 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcccc
Q 013608 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILW 437 (439)
Q Consensus 358 ~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgP 437 (439)
++++|+|.+.++++||+|++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 841 ~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGP 915 (1026)
T 4f9i_A 841 ATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGP 915 (1026)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSS
T ss_pred hcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCc
Confidence 9999999999999999999999999999999999999 999999742 13499999999999999999999999999
Q ss_pred CC
Q 013608 438 VS 439 (439)
Q Consensus 438 v~ 439 (439)
|+
T Consensus 916 Vl 917 (1026)
T 4f9i_A 916 VL 917 (1026)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.1e-75 Score=603.64 Aligned_cols=358 Identities=26% Similarity=0.350 Sum_probs=318.1
Q ss_pred CeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhh
Q 013608 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143 (439)
Q Consensus 64 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a 143 (439)
...+++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEec
Q 013608 144 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (439)
Q Consensus 144 ~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKp 223 (439)
+.+|+..+++.++|++++++++..+...+......+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 66799999999999999998887655443332223456789999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCC
Q 013608 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (439)
Q Consensus 224 s~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk 302 (439)
|+.+|+++..+++++++ + +|+|++|+|+|+.+.++.|++ .+|+|+||||+.+|+.|++.++++++|+++|||||
T Consensus 166 s~~tp~t~~~l~~l~~~----a-lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk 240 (457)
T 3lns_A 166 SETTPETSAVIEKIIAE----A-FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGK 240 (457)
T ss_dssp CTTCHHHHHHHHHHHHH----H-CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCChHHHHHHHHHHHH----h-CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCC
Confidence 99999999999998877 4 999999999997788999998 99999999999999999999999999999999999
Q ss_pred ceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHH
Q 013608 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (439)
Q Consensus 303 ~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~ 382 (439)
||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++|||+++.++++
T Consensus 241 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~r 315 (457)
T 3lns_A 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQR 315 (457)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHH
T ss_pred CCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988 5555 9999999999999
Q ss_pred HHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 383 ~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
++++|+++ ++++++||.. .+.|+|++|||+.+++++|++++||+||||+
T Consensus 316 v~~~i~~a---~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl 364 (457)
T 3lns_A 316 LVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPIL 364 (457)
T ss_dssp HHHHHHHC---CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEE
T ss_pred HHHHHHhc---CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEE
Confidence 99999986 3599999974 2469999999999999999999999999985
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.3e-75 Score=606.70 Aligned_cols=372 Identities=18% Similarity=0.184 Sum_probs=335.9
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEee-EecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 013608 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (439)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~ 124 (439)
....++||+|+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEAR 101 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 34567899999998643 99999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhh--hcCCccc---CCCccccccceeEEEeeccEEEEEcCCC
Q 013608 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWN 199 (439)
Q Consensus 125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~--~l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~N 199 (439)
+++|++++++|+||+..++. +|+..+++.++|+++.+++ ++..... +......+...+++++|+|||++|+|||
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 180 (528)
T 3v4c_A 102 AEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN 180 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCc
Confidence 99999999999999999884 7999999999999998876 3332211 1110012234678999999999999999
Q ss_pred cchhhhH--HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEE
Q 013608 200 YPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIF 274 (439)
Q Consensus 200 ~P~~~~~--~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f 274 (439)
||+...+ +++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|.+ +.++.|++ .+|+|+|
T Consensus 181 ~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~f 260 (528)
T 3v4c_A 181 FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260 (528)
T ss_dssp STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEE
T ss_pred chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 9998755 89999999999999999999999999999999999999999999999999965 78899988 8999999
Q ss_pred eCChHHHHHHHHHhhccC--CceEEEcCCCceEEecCCC---CHHHHHHHHHHHHHhccCCCCCCCceeEEehh-hHHHH
Q 013608 275 VGSPGVGRMIMRNASKTL--TPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALF 348 (439)
Q Consensus 275 ~Gs~~~~~~v~~~aa~~l--~pv~lelgGk~~~iV~~da---Dl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~-i~d~f 348 (439)
|||+.+|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +||+|
T Consensus 261 TGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f 340 (528)
T 3v4c_A 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRF 340 (528)
T ss_dssp ESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHH
T ss_pred ECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHH
Confidence 999999999999999999 9999999999999999999 88999999999999999999999999999997 99999
Q ss_pred HHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCC--
Q 013608 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT-- 426 (439)
Q Consensus 349 ~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~-- 426 (439)
+++|++++++++.| +++||++++.+.++++++++ ++||++++||.. .|+|++|||+.+++++
T Consensus 341 ~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~-------~g~~~~PTvl~~~~~~~~ 404 (528)
T 3v4c_A 341 TTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES-------SGRDASPNLFETTGAQFL 404 (528)
T ss_dssp HHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-------CTTEECCEEEEEEHHHHH
T ss_pred HHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-------CCceeccEEEEecCcccc
Confidence 99999999999765 47899998887777777653 489999999982 6999999999988887
Q ss_pred -CcccccCccccCC
Q 013608 427 -MKLMQEEIILWVS 439 (439)
Q Consensus 427 -~~i~~~E~FgPv~ 439 (439)
|++++||+||||+
T Consensus 405 ~~~i~~eEiFGPVl 418 (528)
T 3v4c_A 405 ADHALGEEVFGPLG 418 (528)
T ss_dssp HCGGGGCCCSSSEE
T ss_pred cChhhcccccCCeE
Confidence 9999999999985
No 44
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=3.2e-74 Score=593.39 Aligned_cols=342 Identities=28% Similarity=0.415 Sum_probs=315.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHh
Q 013608 82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161 (439)
Q Consensus 82 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~ 161 (439)
..+.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+..++...|+..+++.+++++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566899999999999999999999999999999999999999999999999999999999778999999999999998
Q ss_pred hhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHH
Q 013608 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241 (439)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~ 241 (439)
..++..+..............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~- 172 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ- 172 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH-
Confidence 8887765443322222345678999999999999999999999999999999999999999999999999999888776
Q ss_pred HHhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHH
Q 013608 242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 320 (439)
Q Consensus 242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i 320 (439)
+ +|+|++|+|+|+.+.+..|+. .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+
T Consensus 173 ---a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 ---Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp ---H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred ---h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 4 899999999998777778888 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Q 013608 321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (439)
Q Consensus 321 ~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~g 400 (439)
++++|.|+||.|++++|||||+++||+|+++|.++++++ .|++.++++++|||+++.++++++++| +||++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 699999999999999999999999998 69999999
Q ss_pred CCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|.. ...|+|++|||+.+++++|++++||+||||+
T Consensus 323 G~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 356 (469)
T 3sza_A 323 GTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVL 356 (469)
T ss_dssp CCE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEE
T ss_pred Ccc-----CCCCceeCCeeecCCCCcchhhhccccCCeE
Confidence 984 2469999999999999999999999999985
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1e-73 Score=596.09 Aligned_cols=361 Identities=18% Similarity=0.220 Sum_probs=328.1
Q ss_pred CCCCCeEEeecCCCCcEe-eEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 013608 60 PQSETKVQCYEPATMKYL-GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK 138 (439)
Q Consensus 60 ~~~~~~~~~~~P~tg~~i-~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk 138 (439)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 456778999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhhHHHHHHHHHHHHHHhhhh--hcCCccc---CCCccccccceeEEEeeccEEEEEcCCCcchhhh--HHHHHH
Q 013608 139 TMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLA 211 (439)
Q Consensus 139 ~~~~a~~~Ei~~~~~~l~~~~~~~~~--~l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~--~~~i~~ 211 (439)
+..++ .+|+..+++.++|+++++++ ++..... +..........+++++|+|||++|+|||||+... .+++++
T Consensus 83 ~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ 161 (510)
T 1ez0_A 83 PEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 161 (510)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHH
Confidence 99888 57999999999999998876 5443211 1100001113578999999999999999999874 499999
Q ss_pred HHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHh
Q 013608 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (439)
Q Consensus 212 AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~a 288 (439)
||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|. .+.++.|++ .+|+|+||||+.+|+.|++.+
T Consensus 162 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 241 (510)
T 1ez0_A 162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241 (510)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999995 478899988 899999999999999999999
Q ss_pred hccC--CceEEEcCCCceEEecCCCCHH--HHHHHHHHHHHhccCCCCCCCceeEEehh-hHHHHHHHHHHHHHhCccCC
Q 013608 289 SKTL--TPVTLELGGKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGP 363 (439)
Q Consensus 289 a~~l--~pv~lelgGk~~~iV~~daDl~--~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~-i~d~f~~~L~~~~~~l~~G~ 363 (439)
++++ +|+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|.++++++++
T Consensus 242 a~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-- 319 (510)
T 1ez0_A 242 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP-- 319 (510)
T ss_dssp HHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC--
T ss_pred hccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC--
Confidence 9986 9999999999999999999999 99999999999999999999999999999 999999999999999874
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHH-HCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCC---CcccccCccccCC
Q 013608 364 PLAGKYDMGALCLLEHSEKLQNLVNDAL-DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEIILWVS 439 (439)
Q Consensus 364 ~~~~~~~~Gpli~~~~~~~~~~~i~~a~-~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~---~~i~~~E~FgPv~ 439 (439)
||++++.+.+++.++|++++ ++||++++||. .|+|++|||+.+++++ |++++||+||||+
T Consensus 320 --------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl 383 (510)
T 1ez0_A 320 --------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQS 383 (510)
T ss_dssp --------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEE
T ss_pred --------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeE
Confidence 57888899999999999999 48999999997 1899999999988888 9999999999985
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=9e-69 Score=589.87 Aligned_cols=343 Identities=21% Similarity=0.333 Sum_probs=319.6
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHH
Q 013608 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL 159 (439)
Q Consensus 80 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~ 159 (439)
++.++.+|+++++++|++||..|+.+|.++|.++|+++++.|++|+++|++++++|+||+..++ ..|+..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999998 589999999999999
Q ss_pred HhhhhhcCCcc-cCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHH
Q 013608 160 SEGEKWLKPEY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (439)
Q Consensus 160 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~ 238 (439)
...+++..... .+.. .+..++++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++
T Consensus 623 ~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell 699 (1001)
T 3haz_A 623 AQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL 699 (1001)
T ss_dssp HHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence 99887654321 2221 3457889999999999999999999999999999999999999999999999999888877
Q ss_pred HHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhcc---CCceEEEcCCCceEEecCCCCH
Q 013608 239 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIVCDDVDV 313 (439)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~---l~pv~lelgGk~~~iV~~daDl 313 (439)
.+ +|+|+|++|+|+|+++.++.|++ ++|+|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||+
T Consensus 700 ~e----AGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADl 775 (1001)
T 3haz_A 700 HE----AGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALP 775 (1001)
T ss_dssp HH----HTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCH
T ss_pred HH----hCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCH
Confidence 66 79999999999998755999988 799999999999999999998864 8999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHC
Q 013608 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 393 (439)
Q Consensus 314 ~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 393 (439)
+.|++.+++|+|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||||+..++++++++|++++++
T Consensus 776 d~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~ 855 (1001)
T 3haz_A 776 EQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE 855 (1001)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 394 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 394 Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
| ++ +||... ..|+|++|||+.+ ++|++++||+||||+
T Consensus 856 g-~v-~gg~~~-----~~G~fv~PTvl~~--~~~~~~~eEiFGPVL 892 (1001)
T 3haz_A 856 A-RL-HFAGPA-----PEGCFVAPHIFEL--TEAGQLTEEVFGPIL 892 (1001)
T ss_dssp S-EE-EEECCC-----CSSSCCCCEEEEC--SSGGGCCSCCCSSEE
T ss_pred C-eE-eccccC-----CCCcEEeeEEecC--CCHHHHhccccCcEE
Confidence 8 88 888742 3599999999974 789999999999985
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=2.6e-63 Score=512.34 Aligned_cols=332 Identities=18% Similarity=0.202 Sum_probs=293.7
Q ss_pred eEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHH
Q 013608 78 GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW 157 (439)
Q Consensus 78 ~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~ 157 (439)
..++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+++|++++++|+||+..++...+...+++.+.+
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~ 83 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN 83 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 34567788999999999999999999999999999999999999999999999999999999988865566566665554
Q ss_pred HHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHH
Q 013608 158 LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 237 (439)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~ 237 (439)
+.+... ... ..+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++
T Consensus 84 ~~~~~~-~~g--~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~l 157 (464)
T 3k9d_A 84 YIKDMK-TIG--MLKE---DNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRI 157 (464)
T ss_dssp HHTTCC-CSE--EEEE---ETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH
T ss_pred hhhccc-ccc--eecc---CCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHH
Confidence 443211 100 0110 1235678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcC-CCceEEecCCCCH
Q 013608 238 IQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCDDVDV 313 (439)
Q Consensus 238 ~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelg-Gk~~~iV~~daDl 313 (439)
+.+++.++|+|+|++|+|++. .+.++.|++ ++|+|+||||+. +++.++++++|+ +|+| ||+|+||++|||+
T Consensus 158 l~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl 232 (464)
T 3k9d_A 158 ISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANI 232 (464)
T ss_dssp HHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCH
Confidence 999999999999999999995 578899998 799999999998 466778899999 7888 9999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHH-------HhCccCCCC-CCCCcccccCCHHHHHHHHH
Q 013608 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSEKLQN 385 (439)
Q Consensus 314 ~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~-------~~l~~G~~~-~~~~~~Gpli~~~~~~~~~~ 385 (439)
+.|++.+++|+|+|+||.|++++|||||+++||+|+++|+++. +++++|++. ++++++||+++.++++++.+
T Consensus 233 ~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~ 312 (464)
T 3k9d_A 233 PRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIAN 312 (464)
T ss_dssp HHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986 567889887 67889999999999999999
Q ss_pred HHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 386 ~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
++++++.+|+++++||.. +++++|++. +|+||||+
T Consensus 313 ~~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl 347 (464)
T 3k9d_A 313 LAGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPIL 347 (464)
T ss_dssp HTTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEE
T ss_pred HhhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceE
Confidence 999999999999999972 567888876 79999985
No 48
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=7.5e-63 Score=507.33 Aligned_cols=331 Identities=17% Similarity=0.188 Sum_probs=284.3
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHH-HHH
Q 013608 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWL 158 (439)
Q Consensus 80 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l-~~~ 158 (439)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.+++++++|++++++|+||+..++...|+..+.+.+ +|+
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999999999999999999999999999998655777777766 333
Q ss_pred HHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHH
Q 013608 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (439)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~ 238 (439)
.. .+... ..+.. .....++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++
T Consensus 81 ~~--~~~~g--~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 81 KD--EQTCG--ILEED---DNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp TT--CCCSE--EC----------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hh--ccccc--cccCC---CCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 32 11110 11111 2245688999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHH
Q 013608 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315 (439)
Q Consensus 239 ~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~ 315 (439)
++++.++|+|+|++|++++. .+.++.|++ ++|+|+||||+.+ .+.++++++|+++|+|||||+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 99999999999999999995 478999998 8999999999985 4567778999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCC
Q 013608 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395 (439)
Q Consensus 316 aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 395 (439)
|++.+++|+|.|+||.|++++|||||+++||+|+++|+++ +||+++++++++++++|+++.+.|+
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999999999999875 3999999999999999988777788
Q ss_pred EEEeCCCCCCCCCCCCCceeccEE-------EecCCCCCcccccCccccCC
Q 013608 396 EILARGSFGHLSEGAVDQYFPPTV-------IVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 396 ~~l~gG~~~~~~~~~~g~~~~PTv-------l~~v~~~~~i~~~E~FgPv~ 439 (439)
++ +||..... ....|+|++||+ +.+++++|++++ |+||||+
T Consensus 295 ~v-~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl 342 (452)
T 3my7_A 295 KI-VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTL 342 (452)
T ss_dssp GG-TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEE
T ss_pred eE-ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEE
Confidence 87 57652110 013599999997 668899999886 8999985
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.3e-63 Score=508.09 Aligned_cols=320 Identities=17% Similarity=0.174 Sum_probs=253.4
Q ss_pred EEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------CC
Q 013608 66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT-------GK 138 (439)
Q Consensus 66 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~-------Gk 138 (439)
--|+||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+ ||
T Consensus 9 ~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk 88 (463)
T 2h5g_A 9 SGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCH
T ss_pred CCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCC
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999 69
Q ss_pred Chh----hhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHH
Q 013608 139 TMV----DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF 214 (439)
Q Consensus 139 ~~~----~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~ 214 (439)
++. ++ ..|+..+++.++|++++++++.... .+......+...+++++|+|||++|+||| |+... +++++||+
T Consensus 89 ~~~~rl~~a-~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 89 PLLKRLSLS-TSKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHTTCCC-HHHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred chhhhhhhh-HHHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 987 35 4799999999999999888776543 12111012335688999999999999887 76655 89999999
Q ss_pred hCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccC
Q 013608 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL 292 (439)
Q Consensus 215 aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l 292 (439)
+||+||+|||+.+|+++..+++++.++|.++| |+|++|+|+|..+.++.|+. ++|+|+||||+.+|+.|++.++ +
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l 241 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--G 241 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--S
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--C
Confidence 99999999999999999999999999998889 99999999995577888987 7999999999999999999988 9
Q ss_pred CceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCccc
Q 013608 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 372 (439)
Q Consensus 293 ~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~G 372 (439)
+|+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++|| |
T Consensus 242 ~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~ 295 (463)
T 2h5g_A 242 IPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------T 295 (463)
T ss_dssp SCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------S
T ss_pred CCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------h
Confidence 99999999999999999999999999999999999 999999999999999998 3
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 373 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 373 pli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+ +++++++++++||+++.||.. ...|+|+ +++|++++||+||||+
T Consensus 296 p~--------~~~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl 341 (463)
T 2h5g_A 296 PL--------FDQIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLEL 341 (463)
T ss_dssp HH--------HHHHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEE
T ss_pred HH--------HHHHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceE
Confidence 43 344688899999999866541 1235443 6799999999999974
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4.6e-61 Score=494.87 Aligned_cols=310 Identities=16% Similarity=0.157 Sum_probs=260.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhhhHHHH-HHHHHHHHHHh
Q 013608 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASLGEIMT-TCEKITWLLSE 161 (439)
Q Consensus 87 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~----~~a~~~Ei~~-~~~~l~~~~~~ 161 (439)
.+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+. .++..+|+.. +++.++|+++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 7875589998 99999999998
Q ss_pred hhhhcCCcccCCCcc-----c-cccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHH
Q 013608 162 GEKWLKPEYRSSGRS-----M-IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235 (439)
Q Consensus 162 ~~~~l~~~~~~~~~~-----~-~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~ 235 (439)
++++..... +.+.. . .+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..++
T Consensus 95 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~ 171 (468)
T 1vlu_A 95 IKDVAELED-PVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMA 171 (468)
T ss_dssp HHHHHHSCC-SSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHhhcCC-CCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHH
Confidence 887753322 11110 0 1235688999999999999999 9 899999999999999999999999999999999
Q ss_pred HHHHHHHHh----cCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEec
Q 013608 236 RIIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 308 (439)
Q Consensus 236 ~~~~~~l~~----aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~ 308 (439)
++++++|.+ +|+|+|++|+|+ ++ +.++.|+. .+|+|+||||+.+|+.|++.+ ++|+++|||||||+||+
T Consensus 172 ~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~ 247 (468)
T 1vlu_A 172 KIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLD 247 (468)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEEC
T ss_pred HHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEEC
Confidence 999999999 999999999999 65 67888887 799999999999999999887 69999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc---CCCCCCCCcccccCCHHHHHHHHH
Q 013608 309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQN 385 (439)
Q Consensus 309 ~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~---G~~~~~~~~~Gpli~~~~~~~~~~ 385 (439)
+|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+ ++
T Consensus 248 ~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~ 308 (468)
T 1vlu_A 248 EDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KT 308 (468)
T ss_dssp TTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HH
T ss_pred CCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hc
Confidence 999999999999999999999 99999999999999 9999999999999987 87532 44
Q ss_pred H-HHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 386 L-VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 386 ~-i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
+ |++++ ++++||+ | ++||++ ++++|++++||+||||+
T Consensus 309 ~~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl 346 (468)
T 1vlu_A 309 AYFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDL 346 (468)
T ss_dssp HHHHHHH----HHTCCCH---------H--HHTTBC---------------CCCC
T ss_pred ccccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceE
Confidence 5 67665 3667775 4 789997 78999999999999996
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=5e-57 Score=462.78 Aligned_cols=303 Identities=19% Similarity=0.209 Sum_probs=248.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hHHHHHHH
Q 013608 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE 153 (439)
Q Consensus 85 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~----~~a~~-------~Ei~~~~~ 153 (439)
.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+. .++.. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 35533 37888999
Q ss_pred HHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHH
Q 013608 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (439)
Q Consensus 154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~ 233 (439)
.+++++...+.. . ...+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..
T Consensus 105 ~l~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-G-EMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-T-CEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-C-ccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 999988765421 1 1111110012346788999999999999998 9 5888999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEeCC-hh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecC
Q 013608 234 YFRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (439)
Q Consensus 234 l~~~~~~~l~~aG~p~~~v~~v~~~-~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~ 309 (439)
+++++.++|.++|+|+|++|+|+|. .+ .++.|.. ++|+|+||||+.+|+.|++.+ ++|+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 9999999999999999999999984 43 5677765 799999999999999999877 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc---CCCCCCCCcccccCCHHHHHHHHHH
Q 013608 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 386 (439)
Q Consensus 310 daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~---G~~~~~~~~~Gpli~~~~~~~~~~~ 386 (439)
|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|.++++++++ |+|. ..++
T Consensus 258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence 99999999999999999999 9999999999999999999999999999988 6542 1356
Q ss_pred HHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
|+++. .| ++ ++++|++++||+||||+
T Consensus 320 i~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl 345 (444)
T 4ghk_A 320 LEAAG-------------------VG------PL--VDATDEDWRTEYLAPVL 345 (444)
T ss_dssp HHHTT-------------------CC------CC--EECCSGGGTCC---CEE
T ss_pred HHhcc-------------------cC------cc--cCCCchhhhccccCceE
Confidence 66542 12 12 36789999999999985
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.9e-57 Score=463.64 Aligned_cols=302 Identities=19% Similarity=0.183 Sum_probs=258.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhh-------hhHHHHHH
Q 013608 84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDAS-------LGEIMTTC 152 (439)
Q Consensus 84 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~----~~a~-------~~Ei~~~~ 152 (439)
--+++++++++|++||+.|+.+|..+|.++|+++++.|++|+++|++++++|+||+. .++. ..|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 345799999999999999999999999999999999999999999999999999985 5553 26899999
Q ss_pred HHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHH
Q 013608 153 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 232 (439)
Q Consensus 153 ~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~ 232 (439)
+.++|+++..++ ... ..+......+...+++++|+|||++|+||| +..+++++++||++||+||+|||+.+|+++.
T Consensus 92 ~~l~~~a~~~~~-~g~-~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 92 KACETVIGLKDP-VGE-VIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHSCCC-TTC-EEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHhcccc-cCc-cccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 999999987654 221 111100001234678999999999999886 4688999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEeC-Chh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEec
Q 013608 233 FYFRIIQAALAAVGAPENLVDVITG-FAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 308 (439)
Q Consensus 233 ~l~~~~~~~l~~aG~p~~~v~~v~~-~~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~ 308 (439)
.+++++.++|.++|+|+|++|+|+| +.+ .++.|.. ++|+|+||||+.+|+.|++.+ ++|+++|||||||+||+
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe
Confidence 9999999999999999999999998 444 5677775 899999999999999999988 59999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 013608 309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388 (439)
Q Consensus 309 ~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~ 388 (439)
+|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|.+++++++++
T Consensus 245 ~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE--------------------------
T ss_pred CCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe--------------------------
Confidence 999999999999999999999 99999999999999999999999999998652
Q ss_pred HHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608 389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS 439 (439)
Q Consensus 389 ~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~ 439 (439)
++||.+ ..| |+ ||| ++++|++++||+||||+
T Consensus 298 ---------~~gg~~------~~~-~~-Ptl---~~~~~~i~~eEiFGPVl 328 (427)
T 1o20_A 298 ---------VRGCEK------TRE-IV-PDV---VPATEDDWPTEYLDLII 328 (427)
T ss_dssp ---------EEECHH------HHH-HS-TTS---EECCGGGTTCCCCSSEE
T ss_pred ---------eecChh------hhh-hC-Ccc---cCCCcchhhcccccceE
Confidence 234431 113 33 895 35689999999999985
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=73.85 E-value=71 Score=31.38 Aligned_cols=162 Identities=18% Similarity=0.187 Sum_probs=90.0
Q ss_pred ccceeEEEeeccEEEEEcCCC---cchhhhHHHHHHHHHhCCEEEEecCC--CchHHHHHHHHHHHHHHHhcCCCCCcEE
Q 013608 179 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGIVIKVSE--NASWSGCFYFRIIQAALAAVGAPENLVD 253 (439)
Q Consensus 179 ~~~~~~~~~PlGVv~~i~p~N---~P~~~~~~~i~~AL~aGN~VVlKps~--~~~~s~~~l~~~~~~~l~~aG~p~~~v~ 253 (439)
+.....++.|+--|++.+|.. ||- +++...+||-.||..=|+-+++ ..-.....++ +.+.+|...
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e---- 189 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR---- 189 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE----
T ss_pred CCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE----
Confidence 344556889999999999954 664 4556688999999874443333 2111111111 122367653
Q ss_pred EEeCCh-hhHHHHHh------CcCEEEEeCChHHHHHHHHHhhccCCceEEE-cCCCc-eEEecC-CCCHHHHHHHHHHH
Q 013608 254 VITGFA-ETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKD-AFIVCD-DVDVPHVAQIAVRA 323 (439)
Q Consensus 254 ~v~~~~-~~~~~L~~------~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~le-lgGk~-~~iV~~-daDl~~aa~~i~~~ 323 (439)
+..-.+ +...+|.- .||+|+=.|..-+...=.+-.. .|-.. ..|.+ -+||.| ++|.+.++..++--
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQ 265 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQ 265 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHH
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCCCCCHHHHHHHHHHh
Confidence 333333 44455543 8999999998776433222221 12222 12333 344444 39999999888755
Q ss_pred HHhccCCCCCCCceeEEehh--hHHHHHHHHHHHHHhC
Q 013608 324 ALQSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSV 359 (439)
Q Consensus 324 ~f~~~GQ~C~~~~~v~V~~~--i~d~f~~~L~~~~~~l 359 (439)
+=+... .+.++|..+ ..++..+.+.+.++.+
T Consensus 266 AEHd~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l 298 (423)
T 4gic_A 266 AEHDED-----AQAILISPDAAHLEAVQASIERLLPGM 298 (423)
T ss_dssp HTTCTT-----CEEEEEESCHHHHHHHHHHHHHHGGGC
T ss_pred hccCCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhC
Confidence 444322 345566544 4455555555554444
No 54
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=47.60 E-value=22 Score=29.91 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=73.6
Q ss_pred cEEEEEcCCCc-chhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeC--ChhhHHHHH
Q 013608 190 GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG--FAETGEALV 266 (439)
Q Consensus 190 GVv~~i~p~N~-P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~--~~~~~~~L~ 266 (439)
|.|++++.-+- +-...+..-...+++|..++- |.-|+.++.+. .|++-..++-++- +++.++.+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa~~L~e~-------~Gl~v~~v~k~~eGG~p~I~d~I~ 79 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTGNLISRA-------TGMNVNAMLSGPMGGDQQVGALIS 79 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHHHHHHHH-------HCCCCEEECCGGGTHHHHHHHHHH
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHHHHHHHH-------hCceeEEEEecCCCCCchHHHHHH
Confidence 77777766544 333445555667778998874 33455433221 7999777664442 234566666
Q ss_pred h-CcCEEEEeCC-------hHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccC
Q 013608 267 S-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329 (439)
Q Consensus 267 ~-~v~~v~f~Gs-------~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~G 329 (439)
+ .+|.|+||=+ ..-+..|.+.|..+.+|+.- +++ .++.++.+..++..
T Consensus 80 ~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T--------------~la-tA~a~v~ai~~~~~ 135 (152)
T 1b93_A 80 EGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT--------------NVA-TADFIIQSPHFNDA 135 (152)
T ss_dssp TTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES--------------SHH-HHHHHHTSGGGGSC
T ss_pred CCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe--------------CHH-HHHHHHHHHhcccc
Confidence 6 9999999866 46788999999999899874 333 34566666666543
No 55
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=46.58 E-value=72 Score=27.45 Aligned_cols=122 Identities=12% Similarity=0.071 Sum_probs=79.0
Q ss_pred ceeEEEeec-cEEEEEcCCCc-chhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeC-
Q 013608 181 KAKVEFHPL-GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG- 257 (439)
Q Consensus 181 ~~~~~~~Pl-GVv~~i~p~N~-P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~- 257 (439)
....+.-|. |.|++++.-+- +-...+..-...+++|..++- |.-|+.++.+. .|++-..++-++-
T Consensus 18 ~~~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~L~e~-------~Gl~v~~v~k~~eG 85 (178)
T 1vmd_A 18 RRYKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGALLQEK-------LGLKVHRLKSGPLG 85 (178)
T ss_dssp CEEEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHHHHHH-------HCCCCEECSCGGGT
T ss_pred cceeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHHHHHH-------hCceeEEEeecCCC
Confidence 344445555 87777776554 434445556667788998873 44555443221 7999766654432
Q ss_pred -ChhhHHHHHh-CcCEEEEeCC-------hHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhcc
Q 013608 258 -FAETGEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328 (439)
Q Consensus 258 -~~~~~~~L~~-~v~~v~f~Gs-------~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~ 328 (439)
+++.++.+.+ .+|.|+||=+ ..-+..|.+.|....+|+.. .++ .|+.++.+.+++.
T Consensus 86 G~pqI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~T--------------nla-tA~A~v~ail~~~ 150 (178)
T 1vmd_A 86 GDQQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAI--------------TRS-TADFLISSPLMND 150 (178)
T ss_dssp HHHHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEES--------------SHH-HHHHHHHSGGGGS
T ss_pred CCchHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEe--------------CHH-HHHHHHHHHhccc
Confidence 2345666666 9999999866 34678899999999899874 333 3466777766665
Q ss_pred C
Q 013608 329 G 329 (439)
Q Consensus 329 G 329 (439)
.
T Consensus 151 ~ 151 (178)
T 1vmd_A 151 V 151 (178)
T ss_dssp C
T ss_pred c
Confidence 3
No 56
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=40.41 E-value=29 Score=28.60 Aligned_cols=57 Identities=18% Similarity=0.150 Sum_probs=42.8
Q ss_pred HhcCCCCCcEEEEeCC------hhhHHHHHh-CcCEEEEeCCh-----HHHHHHHHHhhccCCceEEEc
Q 013608 243 AAVGAPENLVDVITGF------AETGEALVS-SVDKIIFVGSP-----GVGRMIMRNASKTLTPVTLEL 299 (439)
Q Consensus 243 ~~aG~p~~~v~~v~~~------~~~~~~L~~-~v~~v~f~Gs~-----~~~~~v~~~aa~~l~pv~lel 299 (439)
.++|+|-..|+-++-. ++..+.+.+ .++.|+++=+. .-+..+.+.|..+.+|++.++
T Consensus 64 ~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 64 NANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 3489998877766532 445666666 99999997554 478889999999999988543
No 57
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=35.76 E-value=11 Score=30.97 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=52.2
Q ss_pred HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEe-C-ChhhHHHHHh-CcCEEEEeCC------
Q 013608 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT-G-FAETGEALVS-SVDKIIFVGS------ 277 (439)
Q Consensus 207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~-~-~~~~~~~L~~-~v~~v~f~Gs------ 277 (439)
..-...+++|..++- |.-|+.++.+. .|++-..++-++ + +++.++.+.+ .+|.|+||=+
T Consensus 22 a~~~~~ll~Gf~l~A-----T~gTa~~L~e~-------~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~ 89 (134)
T 2xw6_A 22 CQRHREVLARFPLVA-----TGTTGRRIEEA-------TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQP 89 (134)
T ss_dssp HHHTHHHHTTSCEEE-----CHHHHHHHHHH-------HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCT
T ss_pred HHHHHHHhCCCEEEE-----ccHHHHHHHHh-------hCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCC
Confidence 333445566776653 34444433221 799987776555 3 3355666666 9999999876
Q ss_pred -hHHHHHHHHHhhccCCceEEE
Q 013608 278 -PGVGRMIMRNASKTLTPVTLE 298 (439)
Q Consensus 278 -~~~~~~v~~~aa~~l~pv~le 298 (439)
..-+..|.+.|..+-+|+.-.
T Consensus 90 h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 90 HEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp TSCCSHHHHHHHHHHTCCEECS
T ss_pred ccchHHHHHHHHHHcCCCeEcC
Confidence 345678999998888898743
No 58
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=34.65 E-value=1.1e+02 Score=21.13 Aligned_cols=36 Identities=6% Similarity=0.126 Sum_probs=27.8
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608 94 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (439)
Q Consensus 94 ~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la 129 (439)
.++.....|..+|.++|........+.-..+..++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677889999999999988877776666666554
No 59
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=29.40 E-value=83 Score=28.17 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=39.8
Q ss_pred hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChH
Q 013608 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPG 279 (439)
Q Consensus 205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~ 279 (439)
.+..++..+.+||-||++.++..-..+ +..+++. =+|.+.+++++...+- .-. ..+.+.+..+..
T Consensus 20 ~F~~l~~~vl~GnQiIVrg~~~~~~~s--~~~~L~~-----lLP~~c~~l~~~s~~Y---~~~~~cnilgls~~v~ 85 (226)
T 3v42_A 20 SFRMLAWHVLMGNQVIWKSRDVDLVQS--AFEVLRT-----MLPVGCVRIIPYSSQY---EEAYRCNFLGLSPHVQ 85 (226)
T ss_dssp HHHHHHHHHHHTCEEEEECSCHHHHHH--HHHHHGG-----GSCGGGCCEEEEESSC---CCTTTCSEEEECTTCC
T ss_pred HHHHHHHHHhcCCEEEEEcCCHHHHHH--HHHHHHH-----hCCHHHHhccccchhh---cchhheeeecCCCCcc
Confidence 456678899999999999987532222 2233333 3899999998653321 112 455555555433
No 60
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=29.31 E-value=2.5e+02 Score=26.13 Aligned_cols=85 Identities=14% Similarity=0.110 Sum_probs=52.5
Q ss_pred HHHHHHhcCCCCCcEEEEeC-Chhh----HHHHHh-CcCEEEEeCChHHHHHHHHHhh----ccCCceE-EEcCCCc-eE
Q 013608 238 IQAALAAVGAPENLVDVITG-FAET----GEALVS-SVDKIIFVGSPGVGRMIMRNAS----KTLTPVT-LELGGKD-AF 305 (439)
Q Consensus 238 ~~~~l~~aG~p~~~v~~v~~-~~~~----~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa----~~l~pv~-lelgGk~-~~ 305 (439)
+.+.|.+.|.. +.+... .+.. ...+.. ..|.|+..|+..+...+..... ....|+. +-+|--| .+
T Consensus 49 i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~~~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~Gt~N~fa 125 (332)
T 2bon_A 49 AIMLLREEGMT---IHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFA 125 (332)
T ss_dssp HHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHH
T ss_pred HHHHHHHcCCc---EEEEEecCcchHHHHHHHHHhcCCCEEEEEccchHHHHHHHHHhhcccCCCCeEEEecCcCHHHHH
Confidence 34556677775 333332 2222 223333 7899999999999999998887 4455654 3344434 33
Q ss_pred EecC-CCCHHHHHHHHHHHHH
Q 013608 306 IVCD-DVDVPHVAQIAVRAAL 325 (439)
Q Consensus 306 iV~~-daDl~~aa~~i~~~~f 325 (439)
--+. ..|++.+++.++.+.+
T Consensus 126 ~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 126 TSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp HHTTCCSSHHHHHHHHHHSEE
T ss_pred HhcCCCCCHHHHHHHHHcCCe
Confidence 2223 4589999998887655
No 61
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.27 E-value=1.5e+02 Score=21.65 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608 93 AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (439)
Q Consensus 93 ~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la 129 (439)
+-++.....|..++.++|........+.-+.+..++.
T Consensus 47 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 47 EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3356667789999999999888877776666666654
No 62
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=24.89 E-value=1.8e+02 Score=27.18 Aligned_cols=88 Identities=10% Similarity=0.075 Sum_probs=52.1
Q ss_pred HHHHHHHHhcCCCCCcEEEEeC-ChhhHH----HHHh-CcCEEEEeCChHHHHHHHHHh--hccCCceEE-EcCC-CceE
Q 013608 236 RIIQAALAAVGAPENLVDVITG-FAETGE----ALVS-SVDKIIFVGSPGVGRMIMRNA--SKTLTPVTL-ELGG-KDAF 305 (439)
Q Consensus 236 ~~~~~~l~~aG~p~~~v~~v~~-~~~~~~----~L~~-~v~~v~f~Gs~~~~~~v~~~a--a~~l~pv~l-elgG-k~~~ 305 (439)
+.+.+.|.++|+. +.+... .+..+. .+.. ..|.|+..|+..+...+.... .....|+.. -+|- ++-+
T Consensus 45 ~~i~~~L~~~g~~---~~~~~t~~~~~a~~~~~~~~~~~~d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~GT~N~lA 121 (337)
T 2qv7_A 45 PDALIKLEKAGYE---TSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFG 121 (337)
T ss_dssp HHHHHHHHHTTEE---EEEEECCSTTHHHHHHHHHTTTTCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECSSCCHHH
T ss_pred HHHHHHHHHcCCe---EEEEEecCcchHHHHHHHHhhcCCCEEEEEcCchHHHHHHHHHHhCCCCCcEEEecCCcHhHHH
Confidence 3455666667764 333332 222222 2333 789999999999999999888 444455333 3332 2222
Q ss_pred EecC-CCCHHHHHHHHHHHHHh
Q 013608 306 IVCD-DVDVPHVAQIAVRAALQ 326 (439)
Q Consensus 306 iV~~-daDl~~aa~~i~~~~f~ 326 (439)
-.+. ..|++.+++.++.+.+.
T Consensus 122 r~Lg~~~~~~~al~~i~~g~~~ 143 (337)
T 2qv7_A 122 RALHIPNDIMGALDVIIEGHST 143 (337)
T ss_dssp HHTTCCSSHHHHHHHHHHTCEE
T ss_pred HHcCCCCCHHHHHHHHHcCCcE
Confidence 2222 35899999998877543
No 63
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=24.01 E-value=80 Score=25.08 Aligned_cols=81 Identities=11% Similarity=0.106 Sum_probs=47.9
Q ss_pred HHHHHHHhccCCCCCC--CceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCC-------cccccCCHHHHHHHHHHHHH
Q 013608 319 IAVRAALQSSGQNCAG--AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY-------DMGALCLLEHSEKLQNLVND 389 (439)
Q Consensus 319 ~i~~~~f~~~GQ~C~~--~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~-------~~Gpli~~~~~~~~~~~i~~ 389 (439)
..+.......+-.|.+ ....+++.+.++++.+.+.+.+..+.--+|...+. ...|-.+... +..+++.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~---~~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARV---YQALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHH---HHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHH---HHHHHHH
Confidence 4444444444434444 34458999999999999999998843333332222 1222223333 4567787
Q ss_pred HHHCCCEEEeCCC
Q 013608 390 ALDKGAEILARGS 402 (439)
Q Consensus 390 a~~~Ga~~l~gG~ 402 (439)
.+++|.-...|+.
T Consensus 113 l~~~g~l~~~~~~ 125 (135)
T 2v9v_A 113 WSREGRLQLAANT 125 (135)
T ss_dssp HHHTTSEEECSSE
T ss_pred HHHCCCEEecCCE
Confidence 8888966655554
No 64
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.56 E-value=2.5e+02 Score=21.21 Aligned_cols=40 Identities=8% Similarity=0.106 Sum_probs=29.8
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 013608 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 134 (439)
Q Consensus 95 A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~ 134 (439)
++.....|..++.++|..+.......-+.+..++..--..
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~ 88 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRAS 88 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4555678999999999998888877777777666654433
No 65
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=21.32 E-value=2.1e+02 Score=21.69 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=31.8
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 013608 94 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 133 (439)
Q Consensus 94 ~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~ 133 (439)
.++.....|..++.+++..+.....+.-+.+..++..-..
T Consensus 37 isK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 76 (101)
T 1v63_A 37 RMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK 76 (101)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3667778899999999999888888777777777775433
No 66
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=20.90 E-value=2e+02 Score=20.14 Aligned_cols=32 Identities=16% Similarity=0.254 Sum_probs=23.0
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (439)
Q Consensus 95 A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~ 126 (439)
++.....|..+|.++|..........-+.+..
T Consensus 36 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~ 67 (76)
T 1hry_A 36 SKQLGYQWKMLTEAEKWPFFQEAQKLQAMHRE 67 (76)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45566789999999998887766665555443
Done!