Query 013609
Match_columns 439
No_of_seqs 446 out of 1195
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 05:35:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013609.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013609hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 2.1E-44 4.6E-49 320.3 31.7 383 4-437 8-391 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 6.1E-45 1.3E-49 318.8 24.8 404 5-433 25-435 (448)
3 PRK03545 putative arabinose tr 100.0 1.8E-42 3.9E-47 323.9 33.2 378 3-434 3-382 (390)
4 TIGR02332 HpaX 4-hydroxyphenyl 100.0 5.8E-43 1.3E-47 328.3 27.0 396 5-422 4-411 (412)
5 PRK09556 uhpT sugar phosphate 100.0 5.4E-42 1.2E-46 327.5 29.8 408 7-432 27-449 (467)
6 PRK11663 regulatory protein Uh 100.0 2E-41 4.3E-46 320.6 31.8 407 6-437 20-429 (434)
7 TIGR00894 2A0114euk Na(+)-depe 100.0 1.1E-41 2.5E-46 325.8 28.9 415 4-435 14-453 (465)
8 PRK14995 methyl viologen resis 100.0 1.9E-40 4.1E-45 318.6 32.6 379 6-396 3-413 (495)
9 PRK11551 putative 3-hydroxyphe 100.0 1.9E-40 4.1E-45 312.4 31.6 385 3-433 9-397 (406)
10 PRK09705 cynX putative cyanate 100.0 2.1E-40 4.6E-45 309.4 31.2 377 6-436 7-385 (393)
11 KOG2532 Permease of the major 100.0 7.1E-41 1.5E-45 311.2 27.2 381 37-435 66-450 (466)
12 TIGR00903 2A0129 major facilit 100.0 2E-40 4.3E-45 304.7 28.4 361 20-430 2-363 (368)
13 PRK10406 alpha-ketoglutarate t 100.0 2.5E-39 5.4E-44 306.3 33.0 383 4-436 17-428 (432)
14 TIGR00893 2A0114 d-galactonate 100.0 5.9E-40 1.3E-44 308.5 28.6 394 18-430 3-397 (399)
15 PRK10213 nepI ribonucleoside t 100.0 7.1E-39 1.5E-43 298.9 33.9 370 4-426 15-385 (394)
16 PRK03699 putative transporter; 100.0 3.9E-39 8.4E-44 301.6 31.3 378 4-433 2-381 (394)
17 PRK10642 proline/glycine betai 100.0 1.1E-38 2.5E-43 306.1 33.3 390 8-434 15-432 (490)
18 PRK15402 multidrug efflux syst 100.0 2.6E-38 5.6E-43 297.6 32.6 359 3-397 7-371 (406)
19 TIGR00890 2A0111 Oxalate/Forma 100.0 5.3E-39 1.1E-43 299.9 27.3 364 14-425 8-375 (377)
20 TIGR01299 synapt_SV2 synaptic 100.0 5.1E-39 1.1E-43 313.8 27.7 407 4-434 162-736 (742)
21 PRK10091 MFS transport protein 100.0 2E-38 4.3E-43 295.5 30.3 372 10-434 4-378 (382)
22 PRK11273 glpT sn-glycerol-3-ph 100.0 4.8E-38 1E-42 299.1 32.6 401 6-433 26-436 (452)
23 COG2223 NarK Nitrate/nitrite t 100.0 2.6E-38 5.5E-43 277.9 26.3 383 4-435 9-404 (417)
24 TIGR00891 2A0112 putative sial 100.0 2.8E-38 6.1E-43 297.9 28.7 390 3-417 6-401 (405)
25 PLN00028 nitrate transmembrane 100.0 8.5E-38 1.8E-42 298.3 32.2 392 6-432 33-433 (476)
26 PRK12307 putative sialic acid 100.0 7E-38 1.5E-42 296.9 29.8 365 5-397 14-384 (426)
27 PRK09952 shikimate transporter 100.0 3E-37 6.6E-42 292.0 33.9 387 6-435 19-436 (438)
28 TIGR00711 efflux_EmrB drug res 100.0 5.9E-38 1.3E-42 302.7 28.4 376 9-396 2-410 (485)
29 TIGR00881 2A0104 phosphoglycer 100.0 5.6E-38 1.2E-42 293.2 25.4 368 16-397 2-373 (379)
30 TIGR00899 2A0120 sugar efflux 100.0 4E-37 8.6E-42 287.0 30.2 366 16-431 4-373 (375)
31 TIGR00712 glpT glycerol-3-phos 100.0 3.8E-37 8.3E-42 291.9 30.3 403 7-436 25-437 (438)
32 TIGR00897 2A0118 polyol permea 100.0 1.3E-36 2.8E-41 285.1 33.0 378 9-432 13-401 (402)
33 TIGR00887 2A0109 phosphate:H+ 100.0 4.3E-37 9.3E-42 296.3 28.8 415 4-432 11-489 (502)
34 TIGR00710 efflux_Bcr_CflA drug 100.0 1E-36 2.2E-41 285.4 30.4 346 12-394 8-359 (385)
35 PRK15075 citrate-proton sympor 100.0 3.4E-36 7.5E-41 285.0 33.1 356 4-397 10-395 (434)
36 PRK10504 putative transporter; 100.0 1.5E-36 3.4E-41 291.2 30.7 379 8-399 9-418 (471)
37 PRK10077 xylE D-xylose transpo 100.0 1.1E-36 2.4E-41 293.1 29.4 407 6-435 9-460 (479)
38 PRK15034 nitrate/nitrite trans 100.0 3.5E-36 7.6E-41 277.9 30.4 374 8-436 33-458 (462)
39 PRK03633 putative MFS family t 100.0 4.8E-36 1E-40 279.6 31.5 366 10-432 7-372 (381)
40 PRK05122 major facilitator sup 100.0 1.4E-35 2.9E-40 278.7 33.1 372 6-435 12-392 (399)
41 TIGR00879 SP MFS transporter, 100.0 1.1E-36 2.4E-41 293.6 26.2 403 10-435 29-473 (481)
42 PRK15403 multidrug efflux syst 100.0 7.2E-36 1.6E-40 280.2 30.9 354 13-397 20-374 (413)
43 TIGR00892 2A0113 monocarboxyla 100.0 2.7E-36 5.9E-41 286.5 27.9 400 5-427 15-416 (455)
44 PRK10133 L-fucose transporter; 100.0 1.5E-35 3.2E-40 279.4 31.4 376 5-427 22-428 (438)
45 TIGR00900 2A0121 H+ Antiporter 100.0 4.8E-36 1E-40 278.7 26.1 353 14-397 4-364 (365)
46 KOG1330 Sugar transporter/spin 100.0 3.3E-37 7.1E-42 272.8 17.0 381 4-401 28-417 (493)
47 PF07690 MFS_1: Major Facilita 100.0 1.4E-36 3E-41 280.9 22.1 348 14-387 1-352 (352)
48 PRK12382 putative transporter; 100.0 4.8E-35 1E-39 274.2 32.7 369 6-433 12-390 (392)
49 PRK11652 emrD multidrug resist 100.0 5E-35 1.1E-39 274.3 32.1 357 4-397 3-361 (394)
50 TIGR00895 2A0115 benzoate tran 100.0 1.3E-35 2.7E-40 279.2 26.1 377 4-393 12-397 (398)
51 PRK09874 drug efflux system pr 100.0 6.1E-35 1.3E-39 275.4 30.7 377 10-435 15-401 (408)
52 PRK11195 lysophospholipid tran 100.0 3.7E-35 8.1E-40 273.8 28.4 378 13-439 7-390 (393)
53 PRK11043 putative transporter; 100.0 2.9E-34 6.3E-39 269.8 33.7 345 15-397 12-358 (401)
54 PRK10489 enterobactin exporter 100.0 2.6E-35 5.6E-40 278.1 26.4 373 13-432 21-400 (417)
55 PRK03893 putative sialic acid 100.0 5.4E-35 1.2E-39 282.6 28.8 387 5-421 16-442 (496)
56 PRK11646 multidrug resistance 100.0 9.3E-35 2E-39 271.7 29.4 377 13-437 14-393 (400)
57 PRK11102 bicyclomycin/multidru 100.0 7.9E-35 1.7E-39 271.6 28.7 334 23-390 5-343 (377)
58 TIGR00902 2A0127 phenyl propri 100.0 5.4E-34 1.2E-38 265.6 31.9 360 14-427 9-374 (382)
59 PRK15011 sugar efflux transpor 100.0 4.9E-34 1.1E-38 266.9 31.7 369 12-432 18-391 (393)
60 PRK10473 multidrug efflux syst 100.0 4.9E-34 1.1E-38 267.4 31.6 342 13-397 7-350 (392)
61 TIGR00898 2A0119 cation transp 100.0 4.5E-35 9.8E-40 283.6 23.2 373 30-434 110-497 (505)
62 TIGR00886 2A0108 nitrite extru 100.0 3.7E-34 8E-39 266.1 27.0 347 12-383 4-366 (366)
63 TIGR00885 fucP L-fucose:H+ sym 100.0 1E-33 2.2E-38 264.6 29.6 369 10-422 4-402 (410)
64 cd06174 MFS The Major Facilita 100.0 5E-33 1.1E-37 257.0 30.5 347 13-430 3-350 (352)
65 PRK10054 putative transporter; 100.0 1.9E-33 4.1E-38 262.5 26.8 366 12-429 10-381 (395)
66 TIGR00896 CynX cyanate transpo 100.0 1.1E-33 2.5E-38 261.3 23.6 331 25-397 16-349 (355)
67 PRK11128 putative 3-phenylprop 100.0 2.3E-32 5E-37 254.7 31.8 356 18-426 13-373 (382)
68 PRK11010 ampG muropeptide tran 100.0 4.7E-32 1E-36 259.2 31.9 376 11-433 14-404 (491)
69 TIGR00883 2A0106 metabolite-pr 100.0 1E-32 2.3E-37 259.0 26.2 359 18-422 2-391 (394)
70 PRK09528 lacY galactoside perm 100.0 9.6E-32 2.1E-36 254.0 26.0 382 11-435 12-406 (420)
71 COG2807 CynX Cyanate permease 100.0 8.2E-31 1.8E-35 225.5 27.5 377 8-436 11-389 (395)
72 PRK11902 ampG muropeptide tran 100.0 1.3E-30 2.9E-35 244.6 31.6 376 14-439 4-397 (402)
73 TIGR00882 2A0105 oligosacchari 100.0 1.1E-30 2.4E-35 244.9 29.2 376 12-430 5-393 (396)
74 KOG3764 Vesicular amine transp 100.0 7.6E-33 1.6E-37 239.9 13.0 382 4-433 16-455 (464)
75 KOG2533 Permease of the major 100.0 2E-31 4.4E-36 248.5 22.2 371 9-390 45-424 (495)
76 PRK06814 acylglycerophosphoeth 100.0 7.9E-31 1.7E-35 277.0 28.8 370 13-424 19-414 (1140)
77 KOG2504 Monocarboxylate transp 100.0 2.7E-31 5.9E-36 250.3 22.1 406 6-432 43-476 (509)
78 TIGR00889 2A0110 nucleoside tr 100.0 4.8E-30 1E-34 240.9 30.0 373 14-434 7-404 (418)
79 KOG0569 Permease of the major 100.0 2.6E-30 5.5E-35 237.6 26.7 402 11-436 13-458 (485)
80 COG0738 FucP Fucose permease [ 100.0 7.6E-30 1.7E-34 223.0 26.6 377 5-431 9-408 (422)
81 PRK08633 2-acyl-glycerophospho 100.0 7.6E-30 1.6E-34 270.6 32.0 356 11-395 11-383 (1146)
82 TIGR00805 oat sodium-independe 100.0 7.6E-31 1.6E-35 256.2 22.0 290 11-303 35-398 (633)
83 PF05977 MFS_3: Transmembrane 100.0 8.8E-30 1.9E-34 241.3 27.8 379 9-431 10-393 (524)
84 KOG0253 Synaptic vesicle trans 100.0 2.5E-29 5.4E-34 215.4 26.8 405 5-436 74-523 (528)
85 TIGR02718 sider_RhtX_FptX side 100.0 1.5E-28 3.2E-33 230.0 31.4 368 11-427 3-386 (390)
86 TIGR00901 2A0125 AmpG-related 100.0 1E-29 2.2E-34 235.1 23.3 320 25-380 4-355 (356)
87 TIGR00924 yjdL_sub1_fam amino 100.0 1.7E-28 3.8E-33 233.5 32.0 409 9-433 10-469 (475)
88 PRK10207 dipeptide/tripeptide 100.0 3E-28 6.4E-33 231.8 30.3 418 5-430 10-474 (489)
89 PF06609 TRI12: Fungal trichot 100.0 1.2E-27 2.5E-32 225.8 32.4 408 14-434 49-556 (599)
90 TIGR00792 gph sugar (Glycoside 100.0 3.4E-28 7.3E-33 231.5 25.5 341 23-398 13-382 (437)
91 KOG2615 Permease of the major 100.0 2.2E-28 4.8E-33 210.9 20.2 334 44-398 68-416 (451)
92 KOG0254 Predicted transporter 100.0 2E-28 4.4E-33 236.1 21.3 401 10-435 46-486 (513)
93 PF00083 Sugar_tr: Sugar (and 100.0 5.7E-33 1.2E-37 265.3 -12.1 398 14-436 5-440 (451)
94 KOG0252 Inorganic phosphate tr 100.0 1.3E-28 2.7E-33 217.6 14.6 413 4-434 36-500 (538)
95 PTZ00207 hypothetical protein; 100.0 8.6E-27 1.9E-31 221.5 25.8 422 4-433 23-553 (591)
96 KOG0255 Synaptic vesicle trans 100.0 5E-27 1.1E-31 227.8 21.2 341 36-395 110-467 (521)
97 TIGR00806 rfc RFC reduced fola 100.0 4.5E-26 9.8E-31 206.5 24.3 354 24-388 41-407 (511)
98 PF03825 Nuc_H_symport: Nucleo 99.9 9.6E-25 2.1E-29 201.3 31.1 380 14-435 7-398 (400)
99 TIGR01301 GPH_sucrose GPH fami 99.9 4.2E-24 9E-29 199.3 31.8 389 13-436 8-475 (477)
100 PRK09584 tppB putative tripept 99.9 3.6E-24 7.8E-29 205.1 29.2 410 11-430 23-477 (500)
101 PF01306 LacY_symp: LacY proto 99.9 2.7E-24 5.8E-29 194.3 24.7 383 11-436 9-404 (412)
102 KOG4686 Predicted sugar transp 99.9 4.8E-25 1E-29 182.6 15.0 386 6-434 41-445 (459)
103 PF13347 MFS_2: MFS/sugar tran 99.9 9.6E-23 2.1E-27 192.9 27.9 336 30-400 23-388 (428)
104 TIGR00788 fbt folate/biopterin 99.9 2E-23 4.3E-28 198.3 23.0 369 9-398 26-415 (468)
105 PRK09669 putative symporter Ya 99.9 9.3E-23 2E-27 193.9 27.2 357 5-399 5-391 (444)
106 PF11700 ATG22: Vacuole efflux 99.9 5.9E-22 1.3E-26 186.2 29.7 358 46-438 72-474 (477)
107 TIGR01272 gluP glucose/galacto 99.9 1.7E-22 3.8E-27 181.4 23.8 276 96-419 8-302 (310)
108 PRK15462 dipeptide/tripeptide 99.9 2.9E-21 6.2E-26 181.1 32.2 176 1-176 1-180 (493)
109 PRK09848 glucuronide transport 99.9 6.4E-22 1.4E-26 188.5 26.6 352 9-398 8-390 (448)
110 KOG2563 Permease of the major 99.9 7.1E-22 1.5E-26 175.3 23.0 393 2-432 38-450 (480)
111 PRK10429 melibiose:sodium symp 99.9 2.6E-21 5.6E-26 185.2 26.2 352 15-399 12-396 (473)
112 PRK11462 putative transporter; 99.9 1.3E-19 2.9E-24 172.1 27.5 358 2-398 2-389 (460)
113 COG2270 Permeases of the major 99.9 5.6E-20 1.2E-24 162.6 22.4 351 45-434 59-431 (438)
114 COG2211 MelB Na+/melibiose sym 99.9 6.6E-19 1.4E-23 161.0 29.6 395 8-434 11-439 (467)
115 PF03209 PUCC: PUCC protein; 99.8 2.1E-18 4.6E-23 153.3 25.3 367 35-435 6-401 (403)
116 PF03137 OATP: Organic Anion T 99.8 6.6E-22 1.4E-26 188.5 -0.3 379 13-397 7-515 (539)
117 KOG2325 Predicted transporter/ 99.8 2E-18 4.4E-23 158.1 19.4 390 4-433 29-476 (488)
118 KOG3626 Organic anion transpor 99.8 1E-17 2.3E-22 159.6 19.9 292 9-303 97-460 (735)
119 KOG2816 Predicted transporter 99.8 4.1E-17 8.9E-22 151.8 20.7 364 8-398 21-394 (463)
120 COG3104 PTR2 Dipeptide/tripept 99.7 1.1E-15 2.4E-20 138.7 25.3 411 9-430 21-485 (498)
121 PF03092 BT1: BT1 family; Int 99.7 2E-15 4.3E-20 141.8 18.7 385 28-437 9-418 (433)
122 TIGR00880 2_A_01_02 Multidrug 99.7 1.4E-16 3E-21 126.3 9.3 139 48-187 2-140 (141)
123 TIGR00889 2A0110 nucleoside tr 99.6 1.3E-15 2.9E-20 143.3 12.9 165 26-190 225-407 (418)
124 PF05631 DUF791: Protein of un 99.6 1.6E-14 3.5E-19 126.7 18.3 245 26-298 51-304 (354)
125 PRK09528 lacY galactoside perm 99.6 1.5E-15 3.2E-20 143.8 12.5 153 38-191 256-409 (420)
126 PRK10642 proline/glycine betai 99.6 4.2E-15 9.1E-20 143.2 15.5 171 22-194 263-438 (490)
127 PRK03893 putative sialic acid 99.6 2.1E-14 4.6E-19 139.1 15.1 150 27-176 293-444 (496)
128 PRK05122 major facilitator sup 99.6 3.6E-14 7.8E-19 133.5 14.5 161 26-189 233-393 (399)
129 PRK09874 drug efflux system pr 99.6 5.8E-14 1.3E-18 132.5 14.8 161 26-187 236-400 (408)
130 cd06174 MFS The Major Facilita 99.6 4.8E-14 1E-18 130.1 13.7 168 14-182 180-349 (352)
131 TIGR01299 synapt_SV2 synaptic 99.6 3.9E-14 8.4E-19 139.7 13.3 137 50-189 601-737 (742)
132 PRK10054 putative transporter; 99.6 1.4E-13 3E-18 128.8 16.5 173 236-430 7-180 (395)
133 PRK11551 putative 3-hydroxyphe 99.6 1E-13 2.2E-18 130.8 15.4 160 24-184 235-395 (406)
134 PRK10489 enterobactin exporter 99.5 9.2E-14 2E-18 131.4 15.0 164 27-191 241-405 (417)
135 TIGR00890 2A0111 Oxalate/Forma 99.5 4E-14 8.6E-19 132.1 11.5 157 21-177 217-374 (377)
136 PRK15011 sugar efflux transpor 99.5 1.4E-13 3E-18 129.0 14.3 156 27-184 234-390 (393)
137 PRK12382 putative transporter; 99.5 1.4E-13 3.1E-18 129.1 13.6 158 25-185 232-389 (392)
138 PRK03545 putative arabinose tr 99.5 4.4E-13 9.5E-18 125.6 16.6 153 32-187 229-382 (390)
139 TIGR00892 2A0113 monocarboxyla 99.5 4.7E-14 1E-18 134.5 9.2 164 15-179 247-415 (455)
140 TIGR00902 2A0127 phenyl propri 99.5 3.1E-13 6.8E-18 126.1 14.3 163 15-180 211-374 (382)
141 PRK11663 regulatory protein Uh 99.5 6.1E-13 1.3E-17 126.3 16.0 171 236-428 23-194 (434)
142 PRK03633 putative MFS family t 99.5 7.5E-13 1.6E-17 123.6 15.4 152 27-182 218-369 (381)
143 PRK09556 uhpT sugar phosphate 99.5 3.1E-13 6.6E-18 129.6 12.8 171 11-182 260-446 (467)
144 TIGR00879 SP MFS transporter, 99.5 4.8E-13 1E-17 129.0 13.3 180 10-189 285-474 (481)
145 TIGR00924 yjdL_sub1_fam amino 99.5 1.7E-12 3.7E-17 124.1 16.8 176 236-432 10-192 (475)
146 PRK15462 dipeptide/tripeptide 99.5 2.2E-12 4.8E-17 121.6 16.6 175 235-431 8-188 (493)
147 PRK11646 multidrug resistance 99.5 2.3E-12 5E-17 120.9 16.8 171 239-431 13-184 (400)
148 PRK09705 cynX putative cyanate 99.5 1.6E-12 3.5E-17 121.7 15.7 173 18-192 214-388 (393)
149 TIGR00899 2A0120 sugar efflux 99.5 7.5E-13 1.6E-17 123.5 13.3 151 30-182 220-371 (375)
150 PLN00028 nitrate transmembrane 99.5 5.3E-12 1.2E-16 121.1 19.0 173 246-433 46-220 (476)
151 COG2271 UhpC Sugar phosphate p 99.4 5.7E-13 1.2E-17 118.4 10.5 180 236-437 29-211 (448)
152 PRK09584 tppB putative tripept 99.4 5.1E-12 1.1E-16 121.6 18.0 177 230-428 14-197 (500)
153 PRK03699 putative transporter; 99.4 9.8E-13 2.1E-17 123.4 12.8 170 13-184 209-379 (394)
154 PRK10504 putative transporter; 99.4 5.3E-12 1.1E-16 121.5 16.9 176 236-433 10-186 (471)
155 PRK10077 xylE D-xylose transpo 99.4 1.2E-12 2.6E-17 126.3 12.2 164 27-190 289-462 (479)
156 PRK11010 ampG muropeptide tran 99.4 2.3E-11 5E-16 116.9 20.8 154 31-184 245-402 (491)
157 PF01770 Folate_carrier: Reduc 99.4 8E-11 1.7E-15 106.6 22.7 346 30-386 25-392 (412)
158 TIGR00900 2A0121 H+ Antiporter 99.4 4.2E-12 9E-17 117.9 14.5 170 240-431 3-178 (365)
159 TIGR00883 2A0106 metabolite-pr 99.4 1.4E-12 3E-17 122.4 11.3 162 14-175 224-391 (394)
160 TIGR00710 efflux_Bcr_CflA drug 99.4 5.3E-12 1.1E-16 118.2 15.0 171 241-433 10-181 (385)
161 PF07690 MFS_1: Major Facilita 99.4 5.1E-12 1.1E-16 116.7 14.8 166 242-428 2-168 (352)
162 TIGR00897 2A0118 polyol permea 99.4 5E-12 1.1E-16 118.9 14.8 166 15-183 228-399 (402)
163 TIGR00886 2A0108 nitrite extru 99.4 1.3E-11 2.8E-16 114.7 16.5 175 237-424 2-180 (366)
164 PRK10091 MFS transport protein 99.4 8.7E-12 1.9E-16 116.5 15.3 174 235-430 2-176 (382)
165 PRK10213 nepI ribonucleoside t 99.4 1.6E-11 3.5E-16 114.9 16.6 159 249-429 33-192 (394)
166 PF05977 MFS_3: Transmembrane 99.4 9.9E-12 2.1E-16 118.7 15.2 155 26-181 235-390 (524)
167 PRK10207 dipeptide/tripeptide 99.4 1.9E-11 4.1E-16 117.0 16.9 174 236-431 14-193 (489)
168 PRK14995 methyl viologen resis 99.4 2.3E-11 5E-16 117.4 17.3 174 238-433 8-183 (495)
169 TIGR00903 2A0129 major facilit 99.4 1.4E-11 3.1E-16 113.7 14.9 162 249-433 4-166 (368)
170 TIGR02332 HpaX 4-hydroxyphenyl 99.4 2.3E-11 4.9E-16 114.6 16.5 176 239-431 11-188 (412)
171 TIGR00893 2A0114 d-galactonate 99.4 1.1E-11 2.4E-16 116.3 14.1 170 11-182 217-396 (399)
172 TIGR00711 efflux_EmrB drug res 99.4 1.9E-11 4.2E-16 118.1 15.9 172 239-432 5-177 (485)
173 COG2814 AraJ Arabinose efflux 99.4 2.7E-11 5.8E-16 109.2 15.4 173 11-185 214-386 (394)
174 PRK11128 putative 3-phenylprop 99.4 1.4E-11 3.1E-16 115.0 14.2 152 24-178 220-372 (382)
175 PRK10473 multidrug efflux syst 99.3 4.3E-11 9.3E-16 112.3 16.9 173 238-433 5-179 (392)
176 PRK12307 putative sialic acid 99.3 1.1E-11 2.4E-16 117.7 13.0 139 28-166 250-389 (426)
177 PRK11273 glpT sn-glycerol-3-ph 99.3 9.7E-12 2.1E-16 118.8 12.4 173 12-185 256-435 (452)
178 PRK11043 putative transporter; 99.3 4.7E-11 1E-15 112.4 17.0 172 241-434 8-183 (401)
179 PRK09952 shikimate transporter 99.3 2.4E-11 5.2E-16 115.5 15.0 161 26-187 267-434 (438)
180 PRK15034 nitrate/nitrite trans 99.3 4.7E-11 1E-15 111.4 16.3 188 235-434 33-234 (462)
181 TIGR00891 2A0112 putative sial 99.3 5.2E-11 1.1E-15 112.3 16.6 175 237-431 13-188 (405)
182 TIGR00712 glpT glycerol-3-phos 99.3 2.3E-11 5.1E-16 115.7 14.2 176 234-431 25-205 (438)
183 PRK15075 citrate-proton sympor 99.3 3.2E-11 6.9E-16 114.6 14.8 144 21-165 250-399 (434)
184 PF11700 ATG22: Vacuole efflux 99.3 2.9E-11 6.3E-16 114.3 13.9 174 10-184 282-467 (477)
185 TIGR00895 2A0115 benzoate tran 99.3 3.1E-11 6.7E-16 113.5 14.0 164 244-429 25-189 (398)
186 TIGR00882 2A0105 oligosacchari 99.3 2.9E-11 6.3E-16 113.6 13.7 142 40-182 250-392 (396)
187 PRK11195 lysophospholipid tran 99.3 4E-11 8.7E-16 112.2 14.5 172 235-432 2-174 (393)
188 KOG0637 Sucrose transporter an 99.3 8E-11 1.7E-15 105.7 15.1 279 9-303 32-363 (498)
189 TIGR00887 2A0109 phosphate:H+ 99.3 2.3E-11 5E-16 117.7 12.7 164 27-191 306-494 (502)
190 PRK11652 emrD multidrug resist 99.3 1.1E-10 2.4E-15 109.6 16.1 163 246-430 18-181 (394)
191 PRK15402 multidrug efflux syst 99.3 1.1E-10 2.5E-15 110.0 16.0 159 251-431 28-187 (406)
192 PF06963 FPN1: Ferroportin1 (F 99.3 4.2E-09 9.2E-14 97.3 25.6 367 11-389 4-411 (432)
193 PRK11102 bicyclomycin/multidru 99.3 5.3E-11 1.1E-15 111.1 13.1 158 252-431 7-165 (377)
194 TIGR00881 2A0104 phosphoglycer 99.3 3.3E-11 7.2E-16 112.4 10.9 165 245-431 4-170 (379)
195 TIGR02718 sider_RhtX_FptX side 99.3 6.5E-11 1.4E-15 111.0 12.7 153 26-179 225-385 (390)
196 PF06813 Nodulin-like: Nodulin 99.2 9.8E-11 2.1E-15 99.8 12.0 179 7-189 1-185 (250)
197 PRK15403 multidrug efflux syst 99.2 2.5E-10 5.4E-15 107.6 15.8 154 254-430 34-189 (413)
198 TIGR00792 gph sugar (Glycoside 99.2 3E-11 6.6E-16 115.1 8.8 147 17-164 230-384 (437)
199 PRK11902 ampG muropeptide tran 99.2 2.7E-10 5.9E-15 107.2 14.5 148 32-183 233-388 (402)
200 KOG3762 Predicted transporter 99.2 1.2E-10 2.6E-15 106.6 10.9 179 231-431 366-546 (618)
201 PRK10406 alpha-ketoglutarate t 99.2 5.4E-10 1.2E-14 106.2 15.4 156 25-182 259-421 (432)
202 KOG2504 Monocarboxylate transp 99.2 2.3E-10 4.9E-15 108.9 12.5 175 9-184 298-475 (509)
203 TIGR00769 AAA ADP/ATP carrier 99.2 8.7E-08 1.9E-12 89.8 29.2 277 7-303 5-334 (472)
204 COG2223 NarK Nitrate/nitrite t 99.2 6.9E-10 1.5E-14 99.2 14.4 176 236-434 14-195 (417)
205 TIGR00885 fucP L-fucose:H+ sym 99.2 1.7E-09 3.7E-14 101.6 17.7 180 238-428 5-203 (410)
206 COG2270 Permeases of the major 99.1 4.6E-10 1E-14 100.3 11.9 152 35-188 279-431 (438)
207 PRK10133 L-fucose transporter; 99.1 2.7E-09 5.9E-14 101.2 17.8 146 237-394 27-177 (438)
208 PF03825 Nuc_H_symport: Nucleo 99.1 6.6E-10 1.4E-14 103.1 13.2 174 14-187 212-397 (400)
209 PF02487 CLN3: CLN3 protein; 99.1 4.5E-08 9.7E-13 89.0 24.4 321 49-392 64-393 (402)
210 TIGR00898 2A0119 cation transp 99.1 2.3E-10 5.1E-15 111.1 10.6 139 49-190 360-499 (505)
211 TIGR00896 CynX cyanate transpo 99.1 1.2E-09 2.5E-14 101.1 14.5 150 254-425 18-168 (355)
212 TIGR00880 2_A_01_02 Multidrug 99.1 6.4E-10 1.4E-14 87.7 10.9 136 277-433 3-139 (141)
213 PF01306 LacY_symp: LacY proto 99.1 3.4E-10 7.5E-15 103.2 10.0 150 41-191 256-406 (412)
214 KOG0569 Permease of the major 99.1 1.5E-09 3.3E-14 101.0 14.3 187 5-192 266-461 (485)
215 TIGR00806 rfc RFC reduced fola 99.1 2.6E-09 5.6E-14 98.3 15.4 162 256-436 45-207 (511)
216 KOG3098 Uncharacterized conser 99.1 1.7E-08 3.8E-13 93.2 20.6 358 4-391 4-409 (461)
217 PRK08633 2-acyl-glycerophospho 99.1 9.1E-10 2E-14 117.9 13.4 148 28-176 251-401 (1146)
218 KOG1330 Sugar transporter/spin 99.1 1.8E-10 3.8E-15 103.9 5.8 178 237-435 34-212 (493)
219 TIGR01272 gluP glucose/galacto 99.1 1.8E-09 3.9E-14 97.2 12.5 157 11-171 142-301 (310)
220 PRK06814 acylglycerophosphoeth 99.1 1E-09 2.2E-14 117.1 12.7 160 16-176 232-413 (1140)
221 COG0477 ProP Permeases of the 99.0 4.1E-09 8.9E-14 95.3 14.0 163 14-176 7-176 (338)
222 KOG3764 Vesicular amine transp 99.0 6.1E-10 1.3E-14 98.3 7.7 147 267-434 101-249 (464)
223 TIGR00926 2A1704 Peptide:H+ sy 99.0 8.3E-08 1.8E-12 94.2 21.7 154 29-182 8-179 (654)
224 KOG4686 Predicted sugar transp 99.0 1E-08 2.3E-13 86.4 13.0 157 9-170 267-427 (459)
225 COG3104 PTR2 Dipeptide/tripept 99.0 5E-09 1.1E-13 96.0 11.9 182 231-434 15-208 (498)
226 TIGR00894 2A0114euk Na(+)-depe 99.0 3.8E-09 8.2E-14 101.5 11.6 147 266-432 70-219 (465)
227 TIGR00805 oat sodium-independe 99.0 1.2E-08 2.5E-13 100.8 15.0 173 251-433 47-282 (633)
228 PTZ00207 hypothetical protein; 99.0 2.2E-08 4.7E-13 96.5 16.4 156 252-432 43-205 (591)
229 TIGR00901 2A0125 AmpG-related 99.0 1.4E-08 3E-13 94.0 14.0 166 254-434 6-180 (356)
230 TIGR01301 GPH_sucrose GPH fami 99.0 2.4E-08 5.1E-13 94.2 15.5 189 237-435 5-221 (477)
231 KOG4332 Predicted sugar transp 98.9 5.4E-09 1.2E-13 87.3 8.4 344 34-428 62-427 (454)
232 PRK09848 glucuronide transport 98.9 3.1E-09 6.8E-14 101.5 7.7 148 16-163 235-391 (448)
233 PF06609 TRI12: Fungal trichot 98.9 6.1E-08 1.3E-12 92.9 15.9 176 232-431 36-216 (599)
234 KOG3574 Acetyl-CoA transporter 98.9 3.9E-07 8.5E-12 80.2 18.6 360 8-398 30-433 (510)
235 KOG0253 Synaptic vesicle trans 98.9 8.5E-09 1.8E-13 90.2 7.8 131 52-188 389-522 (528)
236 PF13347 MFS_2: MFS/sugar tran 98.8 2.1E-08 4.5E-13 95.3 11.0 153 11-163 227-387 (428)
237 PRK10429 melibiose:sodium symp 98.8 6E-09 1.3E-13 100.1 7.3 148 16-163 238-396 (473)
238 KOG3762 Predicted transporter 98.8 1.2E-08 2.7E-13 93.7 8.1 147 35-182 397-544 (618)
239 PRK09669 putative symporter Ya 98.8 4.2E-08 9.1E-13 93.6 11.8 176 246-431 19-203 (444)
240 TIGR00788 fbt folate/biopterin 98.8 1.8E-08 4E-13 96.2 8.5 125 37-162 281-415 (468)
241 PRK11462 putative transporter; 98.8 1.6E-07 3.5E-12 89.7 14.6 181 244-434 17-206 (460)
242 COG2807 CynX Cyanate permease 98.8 1.6E-07 3.4E-12 82.6 12.6 166 19-186 218-386 (395)
243 KOG3810 Micronutrient transpor 98.8 6.8E-08 1.5E-12 83.8 10.2 383 37-434 34-423 (433)
244 KOG2615 Permease of the major 98.7 4.3E-08 9.4E-13 86.4 8.5 115 270-395 66-181 (451)
245 KOG2532 Permease of the major 98.7 1.3E-07 2.9E-12 89.1 11.7 149 266-435 67-219 (466)
246 COG0738 FucP Fucose permease [ 98.7 8.8E-07 1.9E-11 79.2 16.0 169 253-432 29-210 (422)
247 PF06779 DUF1228: Protein of u 98.7 3E-08 6.6E-13 68.3 4.4 80 21-101 4-83 (85)
248 COG2211 MelB Na+/melibiose sym 98.6 1.5E-06 3.4E-11 80.5 14.2 184 242-435 18-210 (467)
249 PF13000 Acatn: Acetyl-coenzym 98.5 1E-05 2.2E-10 74.5 18.3 380 12-398 3-469 (544)
250 PF00083 Sugar_tr: Sugar (and 98.5 1.4E-09 3E-14 104.2 -8.5 164 27-192 271-443 (451)
251 KOG1237 H+/oligopeptide sympor 98.5 2E-05 4.3E-10 76.3 19.7 153 28-180 57-240 (571)
252 KOG0252 Inorganic phosphate tr 98.5 6E-07 1.3E-11 81.3 8.5 183 9-192 304-504 (538)
253 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00011 2.4E-09 69.7 23.3 282 6-303 21-350 (491)
254 PF05978 UNC-93: Ion channel r 98.4 2.5E-06 5.5E-11 67.3 10.0 106 50-157 43-148 (156)
255 KOG0254 Predicted transporter 98.4 4.9E-06 1.1E-10 80.9 14.2 139 274-432 91-230 (513)
256 PF12832 MFS_1_like: MFS_1 lik 98.3 8.7E-07 1.9E-11 60.7 4.7 71 14-84 5-75 (77)
257 KOG2533 Permease of the major 98.3 5.3E-06 1.1E-10 78.7 11.3 153 265-432 74-227 (495)
258 KOG0255 Synaptic vesicle trans 98.3 4.8E-06 1E-10 81.4 11.1 141 267-431 113-254 (521)
259 PF03209 PUCC: PUCC protein; 98.3 1.2E-05 2.7E-10 72.6 12.5 154 27-181 226-394 (403)
260 PF06813 Nodulin-like: Nodulin 98.3 9.1E-06 2E-10 69.6 11.2 135 251-397 17-158 (250)
261 PF12832 MFS_1_like: MFS_1 lik 98.2 8.1E-06 1.8E-10 56.0 7.6 63 240-303 4-66 (77)
262 TIGR00926 2A1704 Peptide:H+ sy 98.1 6.4E-05 1.4E-09 74.2 14.9 169 251-433 2-183 (654)
263 COG3202 ATP/ADP translocase [E 98.0 0.012 2.6E-07 54.8 26.1 279 7-303 25-353 (509)
264 PF05631 DUF791: Protein of un 98.0 0.00036 7.7E-09 62.3 15.0 150 266-435 63-219 (354)
265 KOG2816 Predicted transporter 98.0 0.00021 4.5E-09 67.5 14.0 131 282-436 72-203 (463)
266 KOG3880 Predicted small molecu 97.9 0.00013 2.9E-09 62.7 10.8 139 46-190 64-204 (409)
267 PF07672 MFS_Mycoplasma: Mycop 97.9 0.00023 5E-09 60.3 11.7 240 130-395 2-267 (267)
268 KOG2325 Predicted transporter/ 97.8 0.00025 5.5E-09 66.3 11.1 185 238-434 36-231 (488)
269 TIGR00939 2a57 Equilibrative N 97.7 0.0019 4.1E-08 60.9 16.1 52 97-153 105-156 (437)
270 PF03092 BT1: BT1 family; Int 97.7 0.00034 7.5E-09 66.2 11.1 158 259-434 12-177 (433)
271 PF00854 PTR2: POT family; In 97.6 0.00023 5E-09 66.2 8.7 107 75-181 2-119 (372)
272 KOG1479 Nucleoside transporter 97.4 0.006 1.3E-07 55.7 14.6 124 6-131 15-149 (406)
273 PF06779 DUF1228: Protein of u 97.3 0.0012 2.7E-08 45.6 6.5 78 249-337 5-82 (85)
274 KOG2563 Permease of the major 97.2 0.0013 2.9E-08 60.2 7.4 175 16-190 273-455 (480)
275 PF01770 Folate_carrier: Reduc 97.0 0.018 3.9E-07 53.1 13.1 164 254-436 21-186 (412)
276 PF05978 UNC-93: Ion channel r 97.0 0.036 7.7E-07 43.9 12.9 108 277-396 42-151 (156)
277 PRK03612 spermidine synthase; 96.8 0.024 5.2E-07 54.9 12.7 160 15-176 20-188 (521)
278 KOG3626 Organic anion transpor 96.7 0.044 9.5E-07 54.2 13.4 191 236-436 96-347 (735)
279 PRK03612 spermidine synthase; 96.5 0.1 2.2E-06 50.7 14.9 149 242-397 20-173 (521)
280 COG0477 ProP Permeases of the 96.4 0.11 2.4E-06 46.3 13.9 152 250-421 16-174 (338)
281 KOG4830 Predicted sugar transp 96.2 0.00055 1.2E-08 57.5 -1.9 207 14-291 22-256 (412)
282 PF06963 FPN1: Ferroportin1 (F 96.1 0.61 1.3E-05 44.0 17.3 178 237-428 3-196 (432)
283 KOG3097 Predicted membrane pro 96.1 0.56 1.2E-05 41.6 15.6 67 59-127 73-139 (390)
284 KOG0637 Sucrose transporter an 96.1 0.012 2.6E-07 54.2 5.6 150 236-391 32-200 (498)
285 TIGR00769 AAA ADP/ATP carrier 96.0 0.27 5.8E-06 46.9 14.5 41 355-395 149-190 (472)
286 PF02487 CLN3: CLN3 protein; 95.6 0.1 2.2E-06 48.2 9.5 114 42-158 279-395 (402)
287 PF01733 Nucleoside_tran: Nucl 95.5 0.0028 6E-08 57.2 -0.9 41 106-151 5-45 (309)
288 PF03137 OATP: Organic Anion T 95.4 0.0042 9.2E-08 60.3 0.1 175 250-434 16-252 (539)
289 KOG3098 Uncharacterized conser 95.4 0.15 3.2E-06 48.1 10.0 101 55-156 290-410 (461)
290 PF00854 PTR2: POT family; In 93.8 0.44 9.5E-06 44.4 9.3 82 341-433 40-124 (372)
291 KOG1479 Nucleoside transporter 92.7 6.1 0.00013 36.7 14.3 64 235-300 17-80 (406)
292 KOG1237 H+/oligopeptide sympor 91.6 6.1 0.00013 39.0 14.0 171 240-431 41-244 (571)
293 KOG4332 Predicted sugar transp 91.3 2 4.3E-05 37.2 9.0 135 46-180 284-426 (454)
294 KOG3574 Acetyl-CoA transporter 91.1 2.9 6.4E-05 38.3 10.2 64 236-303 31-99 (510)
295 PF07857 DUF1632: CEO family ( 91.1 9.5 0.00021 33.0 14.5 25 242-266 184-208 (254)
296 KOG2601 Iron transporter [Inor 89.1 3 6.6E-05 38.0 8.6 166 11-176 29-217 (503)
297 PF13000 Acatn: Acetyl-coenzym 85.7 5.7 0.00012 37.9 8.7 65 239-303 3-71 (544)
298 PF02990 EMP70: Endomembrane p 80.6 16 0.00035 35.8 10.1 32 269-300 290-321 (521)
299 TIGR00939 2a57 Equilibrative N 79.8 58 0.0013 31.1 13.9 20 413-432 177-196 (437)
300 KOG3880 Predicted small molecu 78.5 9.1 0.0002 34.1 6.8 117 38-157 281-401 (409)
301 KOG2601 Iron transporter [Inor 77.7 39 0.00085 31.2 10.6 68 236-303 27-94 (503)
302 COG4262 Predicted spermidine s 77.7 57 0.0012 29.8 13.3 99 27-125 25-132 (508)
303 PF06912 DUF1275: Protein of u 71.4 60 0.0013 27.2 11.1 42 129-171 157-198 (209)
304 KOG3810 Micronutrient transpor 70.4 29 0.00063 31.7 7.9 109 47-159 274-384 (433)
305 COG5336 Uncharacterized protei 65.0 35 0.00075 24.8 5.9 33 365-397 37-69 (116)
306 PF13386 DsbD_2: Cytochrome C 61.2 95 0.0021 25.8 14.2 35 269-303 147-181 (199)
307 PF07672 MFS_Mycoplasma: Mycop 60.9 95 0.0021 27.1 9.1 101 48-149 145-254 (267)
308 KOG2881 Predicted membrane pro 60.0 1.2E+02 0.0025 26.4 9.9 20 284-303 252-271 (294)
309 PRK13629 threonine/serine tran 59.8 1.6E+02 0.0035 28.1 13.4 43 128-175 18-60 (443)
310 COG1457 CodB Purine-cytosine p 58.2 1.7E+02 0.0038 27.9 20.7 148 124-303 11-159 (442)
311 PF01733 Nucleoside_tran: Nucl 56.2 4.5 9.8E-05 36.5 0.5 106 49-155 187-305 (309)
312 PRK11017 codB cytosine permeas 51.9 2.1E+02 0.0046 27.0 16.4 52 125-176 2-54 (404)
313 KOG3097 Predicted membrane pro 51.5 1.9E+02 0.0042 26.4 10.3 61 236-303 29-89 (390)
314 PF02694 UPF0060: Uncharacteri 43.9 47 0.001 24.2 3.9 51 271-331 53-103 (107)
315 PRK10263 DNA translocase FtsK; 42.5 5.2E+02 0.011 28.8 13.3 23 280-302 60-82 (1355)
316 PF03219 TLC: TLC ATP/ADP tran 40.7 3.6E+02 0.0078 26.4 20.0 51 366-427 315-365 (491)
317 COG3619 Predicted membrane pro 40.3 2.4E+02 0.0051 24.1 12.9 120 43-162 54-196 (226)
318 PRK00293 dipZ thiol:disulfide 40.3 3.9E+02 0.0085 26.7 15.9 32 270-301 323-354 (571)
319 PF11151 DUF2929: Protein of u 39.8 99 0.0021 19.6 4.8 41 142-182 10-50 (57)
320 PF05255 UPF0220: Uncharacteri 39.2 2E+02 0.0044 23.1 8.0 57 126-182 14-76 (166)
321 PF02694 UPF0060: Uncharacteri 38.9 43 0.00093 24.4 3.1 54 42-95 52-105 (107)
322 KOG4830 Predicted sugar transp 38.2 42 0.00091 29.2 3.5 60 243-303 24-92 (412)
323 PF10183 ESSS: ESSS subunit of 37.7 34 0.00075 25.0 2.6 33 157-189 53-85 (105)
324 COG5336 Uncharacterized protei 37.6 98 0.0021 22.6 4.6 21 283-303 53-73 (116)
325 PF11947 DUF3464: Protein of u 37.2 83 0.0018 24.8 4.7 80 66-149 56-145 (153)
326 PF11299 DUF3100: Protein of u 36.8 51 0.0011 27.9 3.7 51 103-154 176-226 (241)
327 COG2076 EmrE Membrane transpor 36.7 26 0.00057 25.6 1.8 55 66-120 22-76 (106)
328 PF07760 DUF1616: Protein of u 36.4 3E+02 0.0064 24.6 8.8 61 101-163 22-82 (287)
329 PRK02237 hypothetical protein; 35.2 89 0.0019 22.9 4.2 49 272-330 56-104 (109)
330 PF11947 DUF3464: Protein of u 34.3 2E+02 0.0044 22.8 6.4 30 356-385 116-145 (153)
331 PF12805 FUSC-like: FUSC-like 34.0 1E+02 0.0022 27.4 5.6 37 78-114 3-39 (284)
332 TIGR03173 pbuX xanthine permea 33.4 2.7E+02 0.006 26.3 8.6 102 31-133 14-116 (406)
333 TIGR00801 ncs2 uracil-xanthine 33.0 4.3E+02 0.0094 25.1 9.8 98 36-136 30-132 (415)
334 COG2962 RarD Predicted permeas 33.0 3.5E+02 0.0077 24.0 9.7 32 229-260 62-93 (293)
335 PRK02237 hypothetical protein; 29.6 73 0.0016 23.3 3.0 52 44-95 56-107 (109)
336 KOG0055 Multidrug/pheromone ex 28.2 8.5E+02 0.018 27.0 11.6 36 5-40 660-695 (1228)
337 PF04226 Transgly_assoc: Trans 27.3 1.5E+02 0.0033 18.0 4.5 38 145-182 6-43 (48)
338 PF12273 RCR: Chitin synthesis 26.9 32 0.0007 26.3 1.0 18 164-181 1-18 (130)
339 COG2233 UraA Xanthine/uracil p 26.8 4.6E+02 0.0099 25.2 8.5 128 7-136 14-143 (451)
340 PF11299 DUF3100: Protein of u 25.9 1.2E+02 0.0025 25.9 4.0 30 361-390 197-226 (241)
341 PF10639 UPF0546: Uncharacteri 25.4 2.2E+02 0.0049 21.2 5.1 22 227-248 33-54 (113)
342 PF04024 PspC: PspC domain; I 25.3 1.1E+02 0.0023 19.8 3.0 28 163-190 31-61 (61)
343 PF13536 EmrE: Multidrug resis 24.9 2.8E+02 0.0061 20.3 7.1 13 314-326 91-103 (113)
344 TIGR00800 ncs1 NCS1 nucleoside 24.9 6.2E+02 0.013 24.2 17.9 57 125-181 5-64 (442)
345 PF03547 Mem_trans: Membrane t 23.3 6E+02 0.013 23.6 18.3 18 230-247 239-256 (385)
346 PF06783 UPF0239: Uncharacteri 23.3 1.5E+02 0.0033 20.5 3.5 20 164-183 23-42 (85)
347 COG1230 CzcD Co/Zn/Cd efflux s 23.1 5.5E+02 0.012 23.0 11.0 80 5-90 21-103 (296)
348 PRK11375 allantoin permease; P 22.7 7.2E+02 0.016 24.2 14.2 57 126-182 19-78 (484)
349 COG4769 Predicted membrane pro 22.4 45 0.00097 26.5 1.0 52 52-110 81-132 (181)
350 PF01102 Glycophorin_A: Glycop 21.7 93 0.002 23.5 2.5 10 426-435 83-92 (122)
351 COG1983 PspC Putative stress-r 21.5 1.5E+02 0.0033 19.8 3.2 35 157-191 21-66 (70)
352 KOG1278 Endosomal membrane pro 21.1 1.4E+02 0.0031 29.1 4.1 32 269-300 356-387 (628)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-44 Score=320.34 Aligned_cols=383 Identities=20% Similarity=0.266 Sum_probs=330.0
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL 83 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 83 (439)
++..+..+..+.++.|............+|++.+|+|+|..+.|+..|.|.+++.++.|+...+.||+.||++++..+.+
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 45667888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 84 WSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
+.++++++++++ ||+.++++|++.|+..|.+++...++..|..|++||++++++...+.+++.++|.+++.++.|.+||
T Consensus 88 Fi~~n~l~alAp-~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 88 FIVSNLLSALAP-SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred HHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 999999999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHH
Q 013609 164 NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVV 243 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
|..|++.+.++++..+..+...| |++..+ +.+.+..+..+++|+|+++...+
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~~~~--------------------------~~~~~~~~~~~~l~~p~v~~~l~ 218 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSEISG--------------------------SLPGPLRTLLRLLRRPGVLLGLL 218 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CccCCC--------------------------CCCcchhHHHHHhcCchHHHHHH
Confidence 99999999999998888888887 222211 11222233468999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVAS 323 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (439)
..++...+.+...+|+..++++..|+|++..++....++++.++|+.++|++.|| +.++ .+.....+.+
T Consensus 219 ~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~----------~l~~~~~l~a 287 (394)
T COG2814 219 ATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRR----------ALIAALLLLA 287 (394)
T ss_pred HHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchh----------HHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 7776 6666666666
Q ss_pred HHHhhhcccCChhHHHHHHHHHHHhhh-cccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccccc
Q 013609 324 IALMALPIFRSSNGAIFCSSIALGFLA-LGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYS 402 (439)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 402 (439)
+.++.+.+..+............++.. ...........+..|+.+..+.+++....|+|..+|..+.|.+.|+.
T Consensus 288 ~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~----- 362 (394)
T COG2814 288 LALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL----- 362 (394)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----
Confidence 666666665544433333222233222 22223334444566799999999999999999999999999999998
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 013609 403 DLSSPESWRAVFFIPGLLCILSSFVFLLFSTGERI 437 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
++....++.+.+.+++.++.+...+.+|.
T Consensus 363 ------g~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 363 ------GYAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred ------chHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 89999999999999998888776655443
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.1e-45 Score=318.77 Aligned_cols=404 Identities=19% Similarity=0.274 Sum_probs=335.4
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
+.|+.++..+++++...++.+..++.+.|.+.+|.++|.+|.|.+.+.+++.|.++..+.|.++||.+.|+.+..++++.
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLils 104 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILS 104 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhh--hhhhcccC
Q 013609 85 SSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFL--PSLVKYNG 162 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~~ 162 (439)
++.++++++++ +.+.+.+..+++|..+|...|.+...++.|+|++|||+..++++.+.++|..+.|++. +.+..+.+
T Consensus 105 ai~nil~Gfs~-s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~ 183 (448)
T COG2271 105 AIVNILFGFSP-SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG 183 (448)
T ss_pred HHHHHHHhhhh-HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccc
Confidence 99999999997 9999999999999999999999999999999999999999999999999999999999 88888889
Q ss_pred CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccccc-ccccCchHHhhhcchhHHHH
Q 013609 163 PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSA-MKAAKIPWKRIVVNLPVWAI 241 (439)
Q Consensus 163 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (439)
||..|++.++++++..+..++..+|+|++.....-++...+.. +..+ ++++.+ ......-.+.+++||.+|.+
T Consensus 184 w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~-e~~~-----~~~~~~~ls~~~i~~~YVL~Nk~iW~l 257 (448)
T COG2271 184 WRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPL-EIYE-----EEKENEGLTAWQIFVKYVLKNKLIWLL 257 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCch-hhhh-----hhccCCCccHHHHHHHHHHcChHHHHH
Confidence 9999999999999999999999999998753221111111000 0000 000011 11122344667899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHH
Q 013609 242 VVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMV 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 321 (439)
++..++.+..-+++..|.|.|+.|+.|+|..+++...+.+-.++++|.++.|+++||+.+.+ |.+...+..+.
T Consensus 258 a~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr-------R~p~~~i~~~~ 330 (448)
T COG2271 258 ALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR-------RGPMALIFMLL 330 (448)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc-------cchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987544 34566666666
Q ss_pred HHHHHhhhcccCCh-hHHHHHHHHHHHhhhccccc-ccccccccCC-ChhhHHHHHHHHHhhh-hHHHHHHHHHHhhccc
Q 013609 322 ASIALMALPIFRSS-NGAIFCSSIALGFLALGRAG-FAVNHMDIAP-RYAGIVMGISNTAGTL-AGIVGVDMTGKLLEAA 397 (439)
Q Consensus 322 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~g~~~~~~~~-g~~i~~~~~g~l~~~~ 397 (439)
..+++..+...++. ......++...|+....+.. ......|+.| +..|++.|+...+.++ |.+.+....|++.|..
T Consensus 331 i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~ 410 (448)
T COG2271 331 ITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW 410 (448)
T ss_pred HHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC
Confidence 66777666666544 33444444455555444432 2344556666 6799999999999999 8889999999999987
Q ss_pred cccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 398 KTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
+|...|++..+.++++.++.+...+
T Consensus 411 -----------gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 411 -----------GWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred -----------CCcchHHHHHHHHHHHHHHHHHHHh
Confidence 8999999988888887777666544
No 3
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.8e-42 Score=323.90 Aligned_cols=378 Identities=13% Similarity=0.104 Sum_probs=300.2
Q ss_pred CCCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHH
Q 013609 3 NFPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFV 82 (439)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 82 (439)
+++++|..+..+.++.+....+.....+.+|.+.+|+|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.+
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 82 (390)
T PRK03545 3 SRKVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFV 82 (390)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 34556766666666666655555566677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 83 LWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
+.+++++.+++++ |++.+++.|+++|++.+...+...+++.|++|+|+|++++++...+.++|..++|++++.+.++.|
T Consensus 83 ~~~~~~~~~~~~~-~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g 161 (390)
T PRK03545 83 LFIASHVLSALAW-NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG 161 (390)
T ss_pred HHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc
Confidence 9999999999997 999999999999999998889999999999999999999999999999999999999999999899
Q ss_pred CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHH
Q 013609 163 PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIV 242 (439)
Q Consensus 163 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (439)
||+.|++.++++++..+..+...||+|++++ +...+.++.+|+|.++...
T Consensus 162 w~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~ 211 (390)
T PRK03545 162 WRTTFLAIGGGALITLLLLIKLLPLLPSEHS------------------------------GSLKSLPLLFRRPALVSLY 211 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc------------------------------chHHHHHHHHhCcHHHHHH
Confidence 9999999998887766665555555432110 0112346788999988777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHH
Q 013609 243 VNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVA 322 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (439)
...++..........+.+.++++..|.++.+.+.+.....++.++++.+.+++.||.++|. ... +..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~----------~~~-~~~~~ 280 (390)
T PRK03545 212 LLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF----------LLI-AIALL 280 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH----------HHH-HHHHH
Confidence 6666666666667788888888878999999999999999999999999999999988665 333 33333
Q ss_pred HHHHh-hhcccCChhHHHHH-HHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccc
Q 013609 323 SIALM-ALPIFRSSNGAIFC-SSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTT 400 (439)
Q Consensus 323 ~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~ 400 (439)
..... .....++....... .+.+.+. ....+.......+..|+++++++|+.+...++|..+||.+.|.+.|..
T Consensus 281 ~~~~~~l~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~--- 356 (390)
T PRK03545 281 LVCLLLLLPAANSEWHLSVLSIFWGIAI-MCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHL--- 356 (390)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHH-hcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 33332 22333333332222 2223332 222233344455667789999999999999999999999999999998
Q ss_pred ccCCCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 401 YSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
+++..+.+.+.+.+++.+......|+
T Consensus 357 --------g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 357 --------GLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 89999999999988888877766553
No 4
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=5.8e-43 Score=328.30 Aligned_cols=396 Identities=15% Similarity=0.212 Sum_probs=295.6
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
|.+|..+..+++.++++++|+...+...|.+.+|+|+++++.|++.+++.+++.+++++.|+++||+|||+++..+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc-----
Q 013609 85 SSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK----- 159 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 159 (439)
++++.++++++ |++.+++.|+++|++.+...|....++.|++|+++|++++++++.+.++|..+++.+++.+.+
T Consensus 84 ~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 84 GIASTATMFAT-GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHhc-CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999997 999999999999999999999999999999999999999999999999999999999988764
Q ss_pred -ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcc-cccCccCcccchhhh-hccc-cccccccCchHHhhhcc
Q 013609 160 -YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAA-GFGESLLPMRDQKVK-VDNG-GSAMKAAKIPWKRIVVN 235 (439)
Q Consensus 160 -~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 235 (439)
..|||+.|++.++++++..++.+++.||+|++.+...+++ +..++..+..+...+ .+.. +++..+....+++++ +
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-T 241 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-C
Confidence 4699999999988888776767777788876532100000 000000000000000 0000 000001112334444 6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELG-LQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFL 314 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 314 (439)
|.+|...+..++.....+.+..|+|.++++. .|+++.+++.......++.+++.++.|+++||+++|+ ..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~---------~~ 312 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK---------HH 312 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH---------HH
Confidence 8888888888888888999999999999872 4678888898899999999999999999999998776 11
Q ss_pred HHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhc-ccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHH
Q 013609 315 NTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLAL-GRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGK 392 (439)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 392 (439)
......+..+........++........+. .+++.. ..+.......+ .++|+|+++.|+.+...++|++++|.+.|.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~ 391 (412)
T TIGR02332 313 TALPYLFAAAGWLLASATDHNLIQLLGIIM-ASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGI 391 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHH-HHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccc
Confidence 222223333333222222222222211111 111111 11222233334 456899999999999999999999999999
Q ss_pred hhccccccccCCCCcccchhHHHHHHHHHH
Q 013609 393 LLEAAKTTYSDLSSPESWRAVFFIPGLLCI 422 (439)
Q Consensus 393 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (439)
+.|.. ++|+..+.+.+++.+
T Consensus 392 i~~~~----------g~~~~~~~~~~~~~~ 411 (412)
T TIGR02332 392 LKDAT----------GSFNSGLWFVAALLV 411 (412)
T ss_pred ccccC----------CCCchhHHHHHHHHh
Confidence 99987 479998887766543
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=5.4e-42 Score=327.54 Aligned_cols=408 Identities=16% Similarity=0.152 Sum_probs=297.1
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHH
Q 013609 7 RYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSS 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 86 (439)
.+.++..+++++++.+.++..+++..|.+.+|+|++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 45567788888999999999999999999999999999999999999999999999999999999999999888877777
Q ss_pred HHhhhcC-----CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc
Q 013609 87 TCFWLKL-----DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN 161 (439)
Q Consensus 87 ~~~~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 161 (439)
+..+.++ ++ |++.+++.|+++|++.+...|...++++||+|+++|++++|+...+.++|.++++.+...+.+..
T Consensus 107 ~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~ 185 (467)
T PRK09556 107 CMLGFGASLGSGSV-SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYF 185 (467)
T ss_pred HHHHHHHHHhcccc-hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhh
Confidence 6655544 66 99999999999999999999999999999999999999999999999999999999887766643
Q ss_pred ---CCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCch-HHhhhcchh
Q 013609 162 ---GPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIP-WKRIVVNLP 237 (439)
Q Consensus 162 ---~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 237 (439)
+||..|.+.+++.++..++.+++.+|+|++.....+ ++..++..+. ++ ...++++.+..+. .++.+|+|.
T Consensus 186 ~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~-~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~l~~~~ 259 (467)
T PRK09556 186 FDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKA-EEIFGEPISE-ED----KETESTDMTKWQIFVEYVLKNPV 259 (467)
T ss_pred ccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCCh-hhcccCccch-hh----hccccccCcHHHHHHHHHHcChH
Confidence 699999988888887777666676776654322111 1100000000 00 0000000011111 234789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHH
Q 013609 238 VWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTV 317 (439)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 317 (439)
+|...+..++.+....+...|.|.|+++.+|+|..+++.......++.+++.++.|+++||+++|+ ....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~----------~~~~ 329 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR----------ALVA 329 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc----------hHHH
Confidence 999999999988888889999999999889999999999888899999999999999999999887 3333
Q ss_pred HHHHHHHH--HhhhcccCChhHHHHHHHHHHHhhhcccc-c-ccccccccCCChhhHHHHHHHHHhhh-hHHHHHHHHHH
Q 013609 318 GFMVASIA--LMALPIFRSSNGAIFCSSIALGFLALGRA-G-FAVNHMDIAPRYAGIVMGISNTAGTL-AGIVGVDMTGK 392 (439)
Q Consensus 318 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~i~~~~~g~ 392 (439)
........ .+.+...++.... ....+..++....+. . .....+..|++++|++.|+.+...++ |++++|.+.|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~ 408 (467)
T PRK09556 330 CIALALIIFTLGVYQHATSEYMY-LASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGM 408 (467)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHH-HHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHH
Confidence 22222222 1222222233222 222222222211111 1 12223344557999999999999997 77999999999
Q ss_pred hhccccccc-cCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 393 LLEAAKTTY-SDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 393 l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
+.|....+. ...+...+|+..|.+..++.+++.+..+.+.
T Consensus 409 i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 409 IADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999211000 0000123699999999888888877766553
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2e-41 Score=320.61 Aligned_cols=407 Identities=17% Similarity=0.228 Sum_probs=303.0
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWS 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 85 (439)
.++.+.....+++++.+++...+++..|.+.+++|.|+++.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 20 WRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 35566777788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCch
Q 013609 86 STCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNS 165 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~ 165 (439)
++.+++++++ |++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|..+++.+.+.+.+.+|||+
T Consensus 100 ~~~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~ 178 (434)
T PRK11663 100 IINILFGFSS-SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRY 178 (434)
T ss_pred HHHHHHHHHh-HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 9999999997 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchH-HhhhcchhHHHHHHH
Q 013609 166 VFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPW-KRIVVNLPVWAIVVN 244 (439)
Q Consensus 166 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 244 (439)
.|++.+++.++..+...+..||+|++...+...++..+.. +..+ +. +++..+.++.+ ...+++|.+|...+.
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDAL-ELAQ----QQ--EGAGLSRKEILTKYVLLNPYIWLLSFS 251 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccccccc-ccch----hc--cccCCChhhhHHHHHhcChHHHHHHHH
Confidence 9999888777665555556677665432111110000000 0000 00 00000111111 236778999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHH
Q 013609 245 NFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASI 324 (439)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (439)
.++.......+..|+|.|+++.+|++..+++...+...++..+++++.|+++||+.+++.. ........+......
T Consensus 252 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~----~~~~~~~~~~~~~~~ 327 (434)
T PRK11663 252 YVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRG----PMNLIFAAGILLSVG 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcc----HHHHHHHHHHHHHHH
Confidence 8888888888889999999887899999999999999999999999999999999433200 000111222222222
Q ss_pred HHhhhcccCChhHHHHHHHHHHHhhhccc-ccccccccccC-CChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccccc
Q 013609 325 ALMALPIFRSSNGAIFCSSIALGFLALGR-AGFAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYS 402 (439)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 402 (439)
....... .+. .......+..++....+ ........+.. +++|+++.|+.+...++|++++|.+.|++.|..
T Consensus 328 ~~~~~~~-~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~----- 400 (434)
T PRK11663 328 SLWLMPF-ASY-VMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW----- 400 (434)
T ss_pred HHHHccc-ccH-HHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc-----
Confidence 2222222 122 12222222233222211 11223344544 579999999999999999999999999999988
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 013609 403 DLSSPESWRAVFFIPGLLCILSSFVFLLFSTGERI 437 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
+|+.+|.+.+++.+++.+..+...|+++.
T Consensus 401 ------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 401 ------HWTGFFVVISIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 79999999988888877766665555443
No 7
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.1e-41 Score=325.85 Aligned_cols=415 Identities=27% Similarity=0.460 Sum_probs=321.3
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHH----------------------hhCCCccchhhhhhhhhhhhhhhc
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAAD----------------------AAGVNQSSKGTILSTFYYGYACSQ 61 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~~~s~~~~g~~~s~~~~~~~~~~ 61 (439)
.+.||.+...++++..+++.|+...+...+.+.+ |++++..+.|++.+.+.+++.+++
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~ 93 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQ 93 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHH
Confidence 4567888999999999999999999999888876 789999999999999999999999
Q ss_pred ccccccccccCchHHHHHHHHHHHHHHhhhcCCc-chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHh
Q 013609 62 VPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDP-NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTT 140 (439)
Q Consensus 62 ~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 140 (439)
++.|+++||+|||+++..+.++++++.+++.++. .+++.+++.|+++|++.+...+....+++|++|+++|++++++..
T Consensus 94 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 173 (465)
T TIGR00894 94 IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMST 173 (465)
T ss_pred cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 9999999999999999999999999988875442 268889999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHhhhhhhhhcc-cCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccc
Q 013609 141 SGMYLGAAMGMLFLPSLVKY-NGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGG 219 (439)
Q Consensus 141 ~~~~~g~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (439)
.+..+|..+++++++.+.+. .+||+.|++.++++++..++++...+|+|+++++..+ +|.... ++ ..+++
T Consensus 174 ~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~i-----~~---~~~~~ 244 (465)
T TIGR00894 174 SGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISK-FEKKYI-----NS---SLQGQ 244 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCH-HHHHHH-----Hh---hcccc
Confidence 99999999999999999988 4999999999998888777777777777754322111 110000 00 00000
Q ss_pred ccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 013609 220 SAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHL 299 (439)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 299 (439)
++.++.+.++++++++|.+|...+..++.....+.+..|+|.|+++.+|++..+.++......++..++.++.|+++||.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~ 324 (465)
T TIGR00894 245 KGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL 324 (465)
T ss_pred cCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112234688999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred hhccccchhhhhHHHHHHHHHHHHHHHhhhcc-cCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHH
Q 013609 300 ITKRILSVTRTRKFLNTVGFMVASIALMALPI-FRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTA 378 (439)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 378 (439)
++|+.......++.....+..+.++..+.... ..+....+....+..++.+...+.......+..|+.+|.+.|+.+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 404 (465)
T TIGR00894 325 KSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLP 404 (465)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHH
Confidence 87764333333333333333333332222222 22233333333333333333333444455677788999999999999
Q ss_pred hhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 379 GTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 379 ~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
+.+++.++|.+.|.+.+.. +.++|..+|.+.++..+++.++.....+.+
T Consensus 405 ~~l~~~i~p~l~g~~~~~~--------~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 453 (465)
T TIGR00894 405 GFIGGLIASTLAGNILSQD--------SKNVWLIVFLIMAFVNILCVIFYLIFGSAE 453 (465)
T ss_pred HHHHHHHHHHhhheeeCCC--------CchHHHHHHHHHHHHHHHHHHHeeeeecce
Confidence 9999999999999988754 113688999999988888887777665443
No 8
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.9e-40 Score=318.59 Aligned_cols=379 Identities=16% Similarity=0.114 Sum_probs=302.4
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWS 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 85 (439)
++|..+..++++.++..+|.+.++..+|.+.+|+|.+.++.+|+.+.|.+++..+.+++|+++||+|||+++..+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhcc-CCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCc
Q 013609 86 STCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWV-PPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPN 164 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr 164 (439)
++++++++++ |++.++++|+++|+|.+...+.....+.+++ |+++|++++++......+|..+||.+++.+.++.+||
T Consensus 83 ~~~~~~~~a~-~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr 161 (495)
T PRK14995 83 LASLAAAFSP-TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG 161 (495)
T ss_pred HHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH
Confidence 9999999997 9999999999999999998888888887776 6789999999999999999999999999999999999
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCccccc--------------CccCcccchh-------------hhhcc
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFG--------------ESLLPMRDQK-------------VKVDN 217 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~-------------~~~~~ 217 (439)
+.|++...++++..++..+..||+++++.++.|..+.. +....+.... .....
T Consensus 162 ~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~ 241 (495)
T PRK14995 162 SVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIR 241 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999988888777777777777654432322221110 0000000000 00000
Q ss_pred ccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHH
Q 013609 218 GGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVAD 297 (439)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 297 (439)
.+.+.+++..+ .+++|+|.++...+..++.....++...+.|.|+++.+|+|+.+++....+..++..++.++.|++.|
T Consensus 242 ~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~ 320 (495)
T PRK14995 242 TQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVS 320 (495)
T ss_pred HHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222333344 47899999998888888888888888999999999999999999999999999999999999999999
Q ss_pred HhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc---CChhHH-HHHHHHHHHhhhcccccccccccccCCChhhHHHH
Q 013609 298 HLITKRILSVTRTRKFLNTVGFMVASIALMALPIF---RSSNGA-IFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMG 373 (439)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 373 (439)
|+++|+ ....+.++..++...+... ++.+.. ...++.+.+.+....+.......+.++++++.+.+
T Consensus 321 r~g~~~----------~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~ 390 (495)
T PRK14995 321 RLGLRL----------VATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGA 390 (495)
T ss_pred HcCchH----------HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHH
Confidence 999887 6666776666655544322 222222 22333344444444444555566677799999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhhcc
Q 013609 374 ISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 374 ~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
+.+..+++|+.+|+.+.|.+.++
T Consensus 391 ~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 391 IETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999764
No 9
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.9e-40 Score=312.43 Aligned_cols=385 Identities=19% Similarity=0.219 Sum_probs=299.4
Q ss_pred CCCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHH
Q 013609 3 NFPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFV 82 (439)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 82 (439)
+.+++|.++..++...++++++....++..|.+.+|+|.++++.+++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 45678888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 83 LWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
+..++.+++++++ |++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 89 ~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 89 LFGLFSLATAQAW-DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHHhc-cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 9999999999997 999999999999999999999999999999999999999999999999999999999988888899
Q ss_pred CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhc---chhHH
Q 013609 163 PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVV---NLPVW 239 (439)
Q Consensus 163 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 239 (439)
||+.|++.++..++..+....+.||+|++.+++.+.+ +.....+..++ ++..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~ 223 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK------------------------QRAPVLRALFGEGRATATL 223 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch------------------------hhhhhHHHHhhhhhhhHHH
Confidence 9999999887766666656666777665432211000 00000111111 22334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHH
Q 013609 240 AIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGF 319 (439)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 319 (439)
......++.....+....+.|.++++ .|+++.+.+.......++.++++++.|++.||+++|+ ....+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~----------~~~~~~ 292 (406)
T PRK11551 224 LLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRR----------VVLLIY 292 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH----------HHHHHH
Confidence 44444555556667778899999987 7999999999999999999999999999999999888 555555
Q ss_pred HHHHHHHhhhcccCChhHHHHHH-HHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccc
Q 013609 320 MVASIALMALPIFRSSNGAIFCS-SIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAK 398 (439)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 398 (439)
+...++...+...++........ ..+.+..+..........+..++++|+++.|+.+...++++.++|.+.|.+.+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~- 371 (406)
T PRK11551 293 AGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG- 371 (406)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC-
Confidence 55555555555444443332222 2222222222222233344456689999999999999999999999999999876
Q ss_pred ccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 399 TTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
+++...+.......+++.+..+...+
T Consensus 372 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 372 ---------RSTVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46777777777677666666655543
No 10
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2.1e-40 Score=309.42 Aligned_cols=377 Identities=15% Similarity=0.178 Sum_probs=291.5
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWS 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 85 (439)
..|.....++++.+..... ...++.+|.+++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 7 LNFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred hHHHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 3455555555554444433 678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc-CCc
Q 013609 86 STCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN-GPN 164 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~wr 164 (439)
++.+.+++++ |++.++++|+++|++.+...+....++.|++| ++|+++++++..+...|..+++.+++.+.++. +||
T Consensus 86 ~~~~~~~~a~-~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~ 163 (393)
T PRK09705 86 VGALMRELYP-QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWY 163 (393)
T ss_pred HHHHHHHHCc-chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 9999999997 99999999999999999999999999999997 88999999999999999999999999988875 899
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHH
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVN 244 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (439)
+.+.+.++..++.....+...+++|++++ ++ + . +.++.+++|+.|...+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~-~--~-~~~~~l~~~~~~~l~~~ 213 (393)
T PRK09705 164 QTLAWWALPAVVALFAWWWQSAREVASSH--------------------------KT-T--T-TPVRVVFTPRAWTLGVY 213 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccc--------------------------CC-C--c-CCcccccCHhHHHHHHH
Confidence 98877666554443333322222221110 00 0 0 11345677888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHH
Q 013609 245 NFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASI 324 (439)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (439)
.++....+.....+.|.++++ +|.+..+++...+...++.++++++.+++.||.++|+ ....+..+..+
T Consensus 214 ~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~----------~~~~~~~l~~~ 282 (393)
T PRK09705 214 FGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRK----------LLMLALVLQLV 282 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchH----------HHHHHHHHHHH
Confidence 777788888899999999988 7999999999999999999999999999999999888 66666666666
Q ss_pred HHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccC
Q 013609 325 ALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSD 403 (439)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~ 403 (439)
+...+...+.........+.+.+.+...+.......++.+| +++++..|+.+...++++.++|.+.|++.|..
T Consensus 283 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~------ 356 (393)
T PRK09705 283 GFCGFIWLPLQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS------ 356 (393)
T ss_pred HHHHHHHccchHHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 55544332322222222233333333333222333445544 68999999999999999999999999999998
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 404 LSSPESWRAVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
++|...|.+.++.+++..+....+.++++
T Consensus 357 ----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 357 ----GNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 47888898888888777777666655543
No 11
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.1e-41 Score=311.22 Aligned_cols=381 Identities=33% Similarity=0.617 Sum_probs=330.8
Q ss_pred HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcc-hHHHHHHHHHHHhhhcccc
Q 013609 37 DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPN-NVFILVVARLLVGVSQGFI 115 (439)
Q Consensus 37 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~ 115 (439)
.+++++.+|.+++.+.+..|+.+++++.|+++||+|-|+++..+.++.++++++..++.+ +++.+++.|++||++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 368889999999999999999999999999999999999999999999999999988853 5668899999999999999
Q ss_pred hhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc-cCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCC
Q 013609 116 FPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY-NGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHP 194 (439)
Q Consensus 116 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (439)
.|+...+.++|.|++||++..++..++..+|.+++.+++|.+.+. +||+.+|++.++++++..++++.+..|+|+++ +
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h-~ 224 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH-P 224 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC-C
Confidence 999999999999999999999999999999999999999999998 99999999999999999999888888888874 3
Q ss_pred CCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccc
Q 013609 195 KASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEM 274 (439)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 274 (439)
....+|......... ++..+++...|++++++++.+|.+.+..++...+.+.+..|.|.|+++++|++..+.
T Consensus 225 ~is~~El~~I~~~k~--------~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~ 296 (466)
T KOG2532|consen 225 NISEKELKYIEKGKS--------EAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRET 296 (466)
T ss_pred CCCHHHHHHHHhccc--------ccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhh
Confidence 333222211110000 001112267899999999999999999999999999999999999999999999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChh--HHHHHHHHHHHhhhcc
Q 013609 275 GSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSN--GAIFCSSIALGFLALG 352 (439)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 352 (439)
|++.++..+...+..++.|.++||+.+| ..+++..||....++....++.++.+.+.+... ..+.++.+..++.+..
T Consensus 297 G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~ 375 (466)
T KOG2532|consen 297 GFLSALPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFN 375 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccc
Confidence 9999999999999999999999999998 888999999999999999999999999887433 4555666666777777
Q ss_pred cccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 353 RAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
.+.......+..|++.+..+|+.+....+.+.++|.+.|.+.... +...|+.+|++.+++.+++.+++.++.
T Consensus 376 ~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~--------t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 376 ISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDN--------TREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred hhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCC--------CHHHHHHHHHHHHHHHHHhchheeEee
Confidence 777777777778999999999999999999999999999998521 224899999999999999998887775
Q ss_pred cCC
Q 013609 433 TGE 435 (439)
Q Consensus 433 ~~~ 435 (439)
+.+
T Consensus 448 s~e 450 (466)
T KOG2532|consen 448 SGE 450 (466)
T ss_pred cCc
Confidence 443
No 12
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2e-40 Score=304.69 Aligned_cols=361 Identities=16% Similarity=0.095 Sum_probs=267.7
Q ss_pred HHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHH
Q 013609 20 VCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVF 99 (439)
Q Consensus 20 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 99 (439)
.+......+++.+|.+.+|+|+|++|.|++.+.+.+++.+++++.|+++||+|||+++..+......+.......+ |++
T Consensus 2 ~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~ 80 (368)
T TIGR00903 2 ASQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF-NYE 80 (368)
T ss_pred hhhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc-cHH
Confidence 3456677899999999999999999999999999999999999999999999999987766555544443333335 899
Q ss_pred HHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHH
Q 013609 100 ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSL 179 (439)
Q Consensus 100 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~ 179 (439)
.+++.|+++|++.+. .+.....++|++|+|+|++++++.+.+..+|..+++++++.+.+++|||+.|++.++++++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999985 5666677799999999999999999999999999999999999999999999999998888777
Q ss_pred HHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Q 013609 180 LWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWL 259 (439)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (439)
+.++..||+|+++.++. + . ++...++++++|||.+|...+..++....++++.+|+
T Consensus 160 ~~~~~lp~~p~~~~~~~---~-------------------~--~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wl 215 (368)
T TIGR00903 160 LVLAALPALPFQAAEGF---G-------------------F--KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWL 215 (368)
T ss_pred HHHHHcCCCCCCCCCCc---c-------------------h--HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888776532100 0 0 0001246789999999999999999999999999999
Q ss_pred HHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHH
Q 013609 260 PTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAI 339 (439)
Q Consensus 260 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (439)
|.|+++ .|++.. .+.......+.+. +..++++||..||+ .|+........+.++....+....+....+
T Consensus 216 p~~L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~~r~~------~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 284 (368)
T TIGR00903 216 EAALRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDRVARAG------LRSIYIRAAALLIAAFFLALAFELNRLALF 284 (368)
T ss_pred HHHHHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHHhhhhh------hHHHHHHHHHHHHHHHHHHHHHccccHHHH
Confidence 999987 678754 4554444444444 44578889887654 111222223333344443444333333333
Q ss_pred HHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHH
Q 013609 340 FCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPG 418 (439)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (439)
....+...+.....+....+..|..| |.|+++.|+.+...++++.++|.+.+.+.. +.+..|.+.+
T Consensus 285 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-------------~~~~~f~~~~ 351 (368)
T TIGR00903 285 AFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-------------SAEAYFTFLA 351 (368)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-------------CHHHHHHHHH
Confidence 22222222222232334455556555 799999999999999999999999988773 3566777777
Q ss_pred HHHHHHHHHHHH
Q 013609 419 LLCILSSFVFLL 430 (439)
Q Consensus 419 ~~~~~~~~~~~~ 430 (439)
+..+++.+....
T Consensus 352 ~~~~i~~~~~~~ 363 (368)
T TIGR00903 352 ILITIAFAIALL 363 (368)
T ss_pred HHHHHHHHHHHh
Confidence 777777766543
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2.5e-39 Score=306.29 Aligned_cols=383 Identities=14% Similarity=0.094 Sum_probs=272.7
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhC---CCccchhhhhh---hhhhhhhhhcccccccccccCchHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAG---VNQSSKGTILS---TFYYGYACSQVPGGWAAQKIGGRKVL 77 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~g~~~s---~~~~~~~~~~~~~g~l~dr~Grr~~l 77 (439)
+++++..+...+++.+++++|...++...|.+.+|++ .+..+.+...+ ...++..++++++|+++||+|||+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l 96 (432)
T PRK10406 17 TRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM 96 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 3456666777788999999999999999999999985 44554444444 44455559999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCcchHH--------HHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHH
Q 013609 78 LFSFVLWSSTCFWLKLDPNNVF--------ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAM 149 (439)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 149 (439)
..+.++++++++++++++ ++. .+++.|+++|++.|..++...++++|++|+|+|+++.++.+.+...|..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 97 LISVCMMCFGSLVIACLP-GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHhhcC-CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 999999999999999997 664 68999999999999999999999999999999999999998888888888
Q ss_pred Hhhhhhhhh--------cccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccccc
Q 013609 150 GMLFLPSLV--------KYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSA 221 (439)
Q Consensus 150 g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (439)
++.+...+. +.+|||++|++.++++++... .....||+|+++.+ +
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~~~~-------------------------~- 228 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQETR-------------------------A- 228 (432)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchHHHh-------------------------h-
Confidence 887655543 257999999988777665432 23334454332100 0
Q ss_pred ccccCchHHhhhcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 013609 222 MKAAKIPWKRIVVNLPVWAIVVNNFT-FHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLI 300 (439)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 300 (439)
+++..++++++|+|+.+...+...+ ....++.+..|+|.|+++.+|++..+.+.......+...++..+.|+++||++
T Consensus 229 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~g 307 (432)
T PRK10406 229 -LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIG 307 (432)
T ss_pred -hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0112346788889888776665544 36677888999999998888999888888888888888888999999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHHh-h---hcccCChhHHHHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHH
Q 013609 301 TKRILSVTRTRKFLNTVGFMVASIALM-A---LPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGIS 375 (439)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~ 375 (439)
||+ ....+..+..+... . ....++.........+..+..+...+.......|..| |.|+++.|+.
T Consensus 308 rr~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~ 377 (432)
T PRK10406 308 RRT----------SMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLS 377 (432)
T ss_pred chH----------HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHH
Confidence 887 44443332222211 1 1111222222222222222222222334455556555 7899999999
Q ss_pred HHHhhh-hHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 376 NTAGTL-AGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 376 ~~~~~~-g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
+...+. .+...|.+.+. .+.. +.+...+++.++..+++.+..++++++.|
T Consensus 378 ~~~g~~~~g~~~p~~~~~-l~~~----------g~~~~~~~~~~~~~~i~~~~~~~l~~~~~ 428 (432)
T PRK10406 378 YAVANALFGGSAEYVALS-LKSI----------GMETAFFWYVTLMAVVAFLVSLMLHRKGK 428 (432)
T ss_pred HHHHHHHHHhHHHHHHHH-HHHh----------CCCcHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 988775 34557777774 4554 25666677777777777666666555443
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=5.9e-40 Score=308.50 Aligned_cols=394 Identities=24% Similarity=0.406 Sum_probs=299.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcch
Q 013609 18 TCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNN 97 (439)
Q Consensus 18 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 97 (439)
+++..++...++...|.+.+++|.++.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++..++++++ |
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~-~ 81 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG-A 81 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc-C
Confidence 456788889999999999999999999999999999999999999999999999999999999999999999999997 9
Q ss_pred HHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHH
Q 013609 98 VFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMW 177 (439)
Q Consensus 98 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~ 177 (439)
++.+++.|+++|++.+...+...+++.|++|+|+|++.+++.+....+|..+++.+++.+.+..+||+.|++.+++.++.
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888777
Q ss_pred HHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 013609 178 SLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMN 257 (439)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (439)
.+...+..||+|++++...++++....+ ... .+.+.+++.++...+.++.+++|+++...+..++..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (399)
T TIGR00893 162 GVLWLKFIPDPPQKAKWLTEEEKYIVVG-GLL----AEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLT 236 (399)
T ss_pred HHHhhheecCCCCccccCCHHHHhhcch-hhc----cccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHH
Confidence 6666666666654432211111100000 000 00001111222334567889999999999999999999999999
Q ss_pred HHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhH
Q 013609 258 WLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNG 337 (439)
Q Consensus 258 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (439)
+.|.|+++.+|.++.+.+.+.....++.+++.++.+++.||+++|+... .........+..+...........+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (399)
T TIGR00893 237 WFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSL--VFARKTAIIAGLVLSLLMFATNYVNIPYA 314 (399)
T ss_pred HHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch--hHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 9999999889999999999999999999999999999999999885110 00000111111111122222221222222
Q ss_pred HHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHH
Q 013609 338 AIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFI 416 (439)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 416 (439)
......+..+..+ ..+.......| .++++|+++.|+.+...++|+.++|.+.|.+.|.. ++|+..+.+
T Consensus 315 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~----------g~~~~~~~~ 383 (399)
T TIGR00893 315 ALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT----------GSFAGALMV 383 (399)
T ss_pred HHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC----------CchhHHHHH
Confidence 2222333333323 23344444444 55589999999999999999999999999999987 248999988
Q ss_pred HHHHHHHHHHHHHH
Q 013609 417 PGLLCILSSFVFLL 430 (439)
Q Consensus 417 ~~~~~~~~~~~~~~ 430 (439)
.+++.+++.+..+.
T Consensus 384 ~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 384 VAALALIGALSYLL 397 (399)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888777666543
No 15
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=7.1e-39 Score=298.86 Aligned_cols=370 Identities=15% Similarity=0.153 Sum_probs=281.4
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL 83 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 83 (439)
.++.|..+..+..+.+..........+.+|++.+|+|.++++.++..+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~ 94 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVL 94 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 45567766677776666666666777789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 84 WSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
.+++.+++++++ |++.+++.|+++|++.+...+...+++.|++|+|+|++++++...+.++|..++|++++.+.+++||
T Consensus 95 ~~~~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw 173 (394)
T PRK10213 95 LTLSCLLVSFAN-SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGW 173 (394)
T ss_pred HHHHHHHHHHHC-hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH
Confidence 999999999986 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHH
Q 013609 164 NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVV 243 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
|+.|++.++++++..+......||+|++++ +...+.++.+|+|.++...+
T Consensus 174 ~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~------------------------------~~~~~~~~~l~~~~~~~~~~ 223 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWIIKSLPSLPGEPS------------------------------HQKQNTFRLLQRPGVMAGMI 223 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCcccc------------------------------cchhHHHHHhcCHHHHHHHH
Confidence 999999887776655544444555432110 01112357888999988777
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWL-PTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVA 322 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (439)
..++.....+....+. |.+. +.+|+++.+.+......+++.+++..+.+++.||.+++. .........
T Consensus 224 ~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~----------l~~~~~~~~ 292 (394)
T PRK10213 224 AIFMSFAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLA----------LAGAPLVLA 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhH----------HHHHHHHHH
Confidence 6666666666666776 5555 458999999999889899999999999999999843322 333333323
Q ss_pred HHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccccc
Q 013609 323 SIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYS 402 (439)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 402 (439)
...+.+....++.+......++.........+.......+..|+++++..+......++|..+||.+.|.+.|..
T Consensus 293 ~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~----- 367 (394)
T PRK10213 293 VSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNI----- 367 (394)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 333333333333333332222222222333343443334444566778888888889999999999999999987
Q ss_pred CCCCcccchhHHHHHHHHHHHHHH
Q 013609 403 DLSSPESWRAVFFIPGLLCILSSF 426 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~ 426 (439)
++...+...+++.++..+
T Consensus 368 ------g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 368 ------GLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred ------ChhhHHHHHHHHHHHHHH
Confidence 777777777666554443
No 16
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=3.9e-39 Score=301.56 Aligned_cols=378 Identities=13% Similarity=0.120 Sum_probs=293.3
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL 83 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 83 (439)
+.+|++....++++.++.+.+....++.+|++.+++|+|+++.+++.+.+.+++.+++++.|++.||+|||+++..+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 2 NSNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34566777788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc-ccC
Q 013609 84 WSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK-YNG 162 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~ 162 (439)
.+++.+++++++ +++.+++.|+++|++.+...+...+++.|++|+++|++.++..+....+|..++|.+.+.+.+ ..+
T Consensus 82 ~~i~~~l~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g 160 (394)
T PRK03699 82 MILAVAGLMFSH-SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE 160 (394)
T ss_pred HHHHHHHHHHcc-hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999997 999999999999999998899999999999999999999999999999999999998887754 579
Q ss_pred CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHH
Q 013609 163 PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIV 242 (439)
Q Consensus 163 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (439)
||+.|.+.+++.++..++.++ ++.|+.++++.+ + + ++..+ + ..++.++...
T Consensus 161 w~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~~~--~-------------------~-~~~~~----~-~~~~~~~~~~ 211 (394)
T PRK03699 161 WYWVYACIGLVYVAIFILTLF--SEFPALGKHAPK--A-------------------D-KPVAK----E-KWGIGVLFLA 211 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--cCCccccccCcc--c-------------------c-Ccccc----c-cCChHHHHHH
Confidence 999999988877665544432 222221111000 0 0 00000 1 1245667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHH
Q 013609 243 VNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVA 322 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (439)
+..++.....+.+..|.|.|+++.+|+|+.+.+.+.+...++..+++++.+++.||+++|+ .......+.
T Consensus 212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~----------~l~~~~~~~ 281 (394)
T PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR----------ILTVLAGLA 281 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh----------HHHHHHHHH
Confidence 7777777778888999999998889999999999999999999999999999999999988 555555555
Q ss_pred HHHHhhhcccCChhHHHH-HHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccc
Q 013609 323 SIALMALPIFRSSNGAIF-CSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTY 401 (439)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~ 401 (439)
.+....+...++...... ....+.+.. ...+.......+..|+++++..|......++|..++|.+.|.+.|..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~---- 356 (394)
T PRK03699 282 LVLMYLFVNTDDPSHLLYAILGLGFFSS-AIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHF---- 356 (394)
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh----
Confidence 555545444444433322 222222222 22233333444555666778889999999999999999999999987
Q ss_pred cCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 402 SDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
+++..+++.+++++++.+......+
T Consensus 357 -------g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 357 -------GLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred -------CchhhhhhhHHHHHHHHHHHHHHHH
Confidence 7888888887777777655555443
No 17
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.1e-38 Score=306.10 Aligned_cols=390 Identities=13% Similarity=0.111 Sum_probs=271.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccc-hhhh-----hhhhhhhhhhhcccccccccccCchHHHHHHH
Q 013609 8 YLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSS-KGTI-----LSTFYYGYACSQVPGGWAAQKIGGRKVLLFSF 81 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~g~~-----~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 81 (439)
+..+...+++.+++++|...++...|.+.++++.+.++ .+++ .++..+++.++++++|+++||+|||+++.+++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45677788999999999999999999999999755433 2222 47778999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCcchHHH--------HHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhh
Q 013609 82 VLWSSTCFWLKLDPNNVFI--------LVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLF 153 (439)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 153 (439)
++++++++++++++ |++. ++++|+++|++.|..++...++++|++|+|+|+++.++...+..+|..+++.+
T Consensus 95 ~l~~i~~~~~a~~~-~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 95 VIMSISTFCIGLIP-SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 8864 89999999999999999999999999999999999999998888888888766
Q ss_pred hhhhh--------cccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccccccccc
Q 013609 154 LPSLV--------KYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAA 225 (439)
Q Consensus 154 ~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (439)
...+. +.+|||+.|++.++++++. ++.....||+|++.+.+.+.++..+ + ...+++
T Consensus 174 ~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~~~~~~~~~~~~------~---------~~~~~~ 237 (490)
T PRK10642 174 VVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQQHVDKLEQGDR------E---------GLQDGP 237 (490)
T ss_pred HHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHHHHHHhhhhhcc------c---------cccccc
Confidence 54432 2579999999977665543 3334566787765321111000000 0 000112
Q ss_pred CchHHhhhcc-hhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 013609 226 KIPWKRIVVN-LPVW-AIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 226 ~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 303 (439)
..++++++++ ++.+ ......++....++....++|.|+++.+|++..+.+.......++.+++.++.|+++||+|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 317 (490)
T PRK10642 238 KVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRP 317 (490)
T ss_pred cCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 2345566553 2322 2233334556777888899999998878998888777777778889999999999999999998
Q ss_pred ccchhhhhHHHHHHHHHHHHH-HH--hhhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHh
Q 013609 304 ILSVTRTRKFLNTVGFMVASI-AL--MALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAG 379 (439)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~ 379 (439)
.+..+.+...+ .. +.....++........++.....+...........+ .|++.|+++.|+.+...
T Consensus 318 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~ 387 (490)
T PRK10642 318 ----------FVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNIS 387 (490)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHH
Confidence 55554433222 11 111122222222222222111111122222333334 45589999999877777
Q ss_pred hhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 380 TLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 380 ~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
..++.++|.+.+++.+.. +++..++.+..+..+++.+..+++++.
T Consensus 388 ~~~g~~~p~i~g~l~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~pes 432 (490)
T PRK10642 388 VLVAGLTPTLAAWLVEST----------QNLMMPAYYLMVVAVIGLITGVTMKET 432 (490)
T ss_pred HHHHHHHHHHHHHHHHHh----------CCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 888899999999998865 245555555555666666655555443
No 18
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2.6e-38 Score=297.65 Aligned_cols=359 Identities=16% Similarity=0.097 Sum_probs=285.8
Q ss_pred CCCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHH
Q 013609 3 NFPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFV 82 (439)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 82 (439)
.+++.+.....+.+..++..++...+.+.+|.+.+|+|.|+.+.++..+.+.+++.+++++.|+++||+|||+++..+..
T Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 86 (406)
T PRK15402 7 LGRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVA 86 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 34566777778888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 83 LWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
+.+++.+.+.+++ +++.+++.|+++|++.+...+...+.+.|++|+++|.+..++......+|..++|.+++.+.++.+
T Consensus 87 ~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 87 FFILTCLAILLAQ-SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHHHc-cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 9999999999987 999999999999999998889999999999999999999999988888999999999999999899
Q ss_pred CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHH
Q 013609 163 PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIV 242 (439)
Q Consensus 163 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (439)
||+.|++.++..++..+..++..||++++.+++ .+.++..++++++++||+++...
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~ 221 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEK------------------------LSLKELGRDYKLVLKNRRFVAGA 221 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc------------------------ccHHHHHHHHHHHHcCcHHHHHH
Confidence 999999988888776665555556554322110 00012234557889999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHH
Q 013609 243 VNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVA 322 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (439)
+..++..........+.|.++++.+|.++.+.+.......++.+++.++.+++.||.++|+ ....+.++.
T Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~----------~~~~~~~~~ 291 (406)
T PRK15402 222 LALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRS----------LIRMGLWPM 291 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH----------HHHHHHHHH
Confidence 7777776666777778899988889999998888877777888999999999999999888 666666655
Q ss_pred HHHHhhhccc----C-ChhHHHH-HHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcc
Q 013609 323 SIALMALPIF----R-SSNGAIF-CSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 323 ~~~~~~~~~~----~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
.++...+... + +...... ..+.+.+..... +..........++++|++.+..+..+.++..+|+.+.+.+.+.
T Consensus 292 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 292 VAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLAN-AGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHh-hhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 5554444321 1 2222222 222333333222 2333333344568999999999999999999999999999887
Q ss_pred c
Q 013609 397 A 397 (439)
Q Consensus 397 ~ 397 (439)
.
T Consensus 371 ~ 371 (406)
T PRK15402 371 G 371 (406)
T ss_pred C
Confidence 7
No 19
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=5.3e-39 Score=299.88 Aligned_cols=364 Identities=15% Similarity=0.172 Sum_probs=284.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcC
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKL 93 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 93 (439)
.++...+........++..|.+.+|+|+|+++.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~ 87 (377)
T TIGR00890 8 GTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI 87 (377)
T ss_pred HHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH
Confidence 33334444444677899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHH
Q 013609 94 DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAAL 173 (439)
Q Consensus 94 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~ 173 (439)
++ |++.+++.|+++|++.+...+.....+.|++| |+|+++.++...+.++|..+++++.+.+.+..+||+.|++.+++
T Consensus 88 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 88 AD-SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred HH-HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 97 99999999999999999888888889999996 67999999999999999988777777777788999999999988
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHH
Q 013609 174 GGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALY 253 (439)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (439)
.++..+..+++.+|+|++++++.+ +.+++..+.++.+|+|+++......++......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKTNI-----------------------EVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGL 222 (377)
T ss_pred HHHHHHHHHHheecCchhccccCc-----------------------ccchhhhhHHHHHcCccHHHHHHHHHHHhHHHH
Confidence 888776666666554432211100 000111234678889988887777777666666
Q ss_pred HHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccC
Q 013609 254 VLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFR 333 (439)
Q Consensus 254 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (439)
....+.+.|.++ +|.++.+.+.......+...+++++.+++.||++||+ ....+....+++.+.+...+
T Consensus 223 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~----------~~~~~~~~~~~~~~~~~~~~ 291 (377)
T TIGR00890 223 LLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK----------TMSIVFGISAVGMAAMLFIP 291 (377)
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----------hhhHHHHHHHHHHHHHHHcc
Confidence 666777777766 7888888888889999999999999999999999988 66667676666666555544
Q ss_pred ChhH--HHH-HHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCccc
Q 013609 334 SSNG--AIF-CSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPES 409 (439)
Q Consensus 334 ~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~ 409 (439)
+... ... ..+.+.+. +...+.......| .++++|+++.|+.+...++|..++|.+.|.+.|.. +
T Consensus 292 ~~~~~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----------g 359 (377)
T TIGR00890 292 MLNDVLFLATVALVFFTW-GGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-----------G 359 (377)
T ss_pred cchhHHHHHHHHHHHHHh-ccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-----------c
Confidence 3221 111 12222222 2222333334444 45589999999999999999999999999999987 8
Q ss_pred chhHHHHHHHHHHHHH
Q 013609 410 WRAVFFIPGLLCILSS 425 (439)
Q Consensus 410 ~~~~~~~~~~~~~~~~ 425 (439)
|+..|.+.+++.+++.
T Consensus 360 ~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 360 FEYTFIVTGAFALTSL 375 (377)
T ss_pred hhhHHHHHHHHHHHhc
Confidence 9999988888777654
No 20
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=5.1e-39 Score=313.79 Aligned_cols=407 Identities=13% Similarity=0.126 Sum_probs=304.7
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL 83 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 83 (439)
.+.+|.++.+++++.+.++++...++.++|.+.++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 35677888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc---
Q 013609 84 WSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY--- 160 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--- 160 (439)
.+++.+++++++ +++.++++|+++|++.++..+...+++.|++|+++|++.+++...+..+|.++++.++..+...
T Consensus 242 ~~i~~ll~afa~-s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 242 NGFFAFFSSFVQ-GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999997 9999999999999999999999999999999999999999999999999999999887665532
Q ss_pred ----------cCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCc--------cCc---ccch------hh
Q 013609 161 ----------NGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGES--------LLP---MRDQ------KV 213 (439)
Q Consensus 161 ----------~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~------~~ 213 (439)
.+||+.+++.++++++. ++..++.||+|++...+.+.+++... ... ..+. ..
T Consensus 321 ~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~ 399 (742)
T TIGR01299 321 SFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKT 399 (742)
T ss_pred hhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHH
Confidence 36899888877766554 44556789999886544443322200 000 0000 00
Q ss_pred hhccc-----cccccc---------------cCchHHhhhcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Q 013609 214 KVDNG-----GSAMKA---------------AKIPWKRIVVN---LPVWAIVVNNFTFHYALYVLMNWLPTYFELG---- 266 (439)
Q Consensus 214 ~~~~~-----~~~~~~---------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 266 (439)
....+ +.+..+ ...+++++++. ++.+.+++.+++..++++++..|+|.++++.
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~ 479 (742)
T TIGR01299 400 IHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADD 479 (742)
T ss_pred hhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000000 00123444443 3456777888889999999999999886541
Q ss_pred h-----------------CCccc---------------------------------------------------------
Q 013609 267 L-----------------QLSLQ--------------------------------------------------------- 272 (439)
Q Consensus 267 ~-----------------g~~~~--------------------------------------------------------- 272 (439)
+ +++..
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 559 (742)
T TIGR01299 480 YAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENT 559 (742)
T ss_pred HHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhcccc
Confidence 0 00000
Q ss_pred ------------------------------------ccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 273 ------------------------------------EMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 273 ------------------------------------~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
.......+..++.+++.++.++++||+|||+ ++.
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~----------~l~ 629 (742)
T TIGR01299 560 DFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLR----------MLA 629 (742)
T ss_pred chhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH----------HHH
Confidence 0122244556888999999999999999999 888
Q ss_pred HHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 317 VGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
.+.++.+++.+++.+.++....+...++..++.....+....+..|..| +.|++++|+.+....+|++++|.+.+.+.+
T Consensus 630 ~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 630 GSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888777766554444443333333333344455566677666 789999999999999999999999998886
Q ss_pred cccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 396 AAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
.. ...+|++.+++.+++.++.+++++.
T Consensus 710 ~~------------~~~pf~i~a~~lll~~ll~~~LPET 736 (742)
T TIGR01299 710 IT------------KAAPILFASAALACGGLLALKLPDT 736 (742)
T ss_pred hh------------hHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 43 5667888888877777777766543
No 21
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2e-38 Score=295.53 Aligned_cols=372 Identities=16% Similarity=0.175 Sum_probs=287.6
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHh
Q 013609 10 IVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCF 89 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 89 (439)
.+..+.+..++.........+.+|.+.+|+|.+.++.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 34556677788888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHH
Q 013609 90 WLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNA 169 (439)
Q Consensus 90 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~ 169 (439)
++++++ |++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++++++.+.+..+||+.|++
T Consensus 84 l~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 84 MFTLSS-SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHHhC-cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 999997 9999999999999999988888899999999999999999999999999999999999999998999999999
Q ss_pred HhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHH
Q 013609 170 EAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFH 249 (439)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (439)
.+++.++..+..++..||.+++++. +.++. .+.+|+++.+......++..
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~~-----------------------------~~~~~-~~~~~~~~~~~~~~~~~~~~ 212 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAKG-----------------------------GLREQ-FHFLRSPAPWLIFAATMFGN 212 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccc-----------------------------CHHHH-HHHhcChHHHHHHHHHHHHH
Confidence 9988777666555566664321100 00011 24567777777666555555
Q ss_pred HHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhh
Q 013609 250 YALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMAL 329 (439)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (439)
........+.+.++++.+|+++.+.+.+.....++.++++++.+++.||+++|+ ....+..+.+++.+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~----------~~~~~~~~~~i~~~~~ 282 (382)
T PRK10091 213 AGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR----------IAAVTDFIIVLALLML 282 (382)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh----------HHHHHHHHHHHHHHHH
Confidence 555566677788888778999999999999999999999999999999999888 6666666666655444
Q ss_pred cc-cCChhHHHH-HHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCC
Q 013609 330 PI-FRSSNGAIF-CSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSS 406 (439)
Q Consensus 330 ~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~ 406 (439)
.. .++.+.... ..+...+..+...+.......+.++ +.++.+ ..+...++|.++||.+.|.+.|..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~--------- 351 (382)
T PRK10091 283 FFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLG--------- 351 (382)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcc---------
Confidence 33 223222222 2222333333333333233334333 455544 346778999999999999999976
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 407 PESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
++|+..+.+.++.+++.........++
T Consensus 352 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (382)
T PRK10091 352 -LAYNYVALPAALLSFAAMSSLLLYGRY 378 (382)
T ss_pred -cCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 489999998877776665555444333
No 22
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=4.8e-38 Score=299.08 Aligned_cols=401 Identities=19% Similarity=0.264 Sum_probs=285.6
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWS 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 85 (439)
++|.++...++.....+.++..++...|.+.++ |.|..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 345556666677777778877788889999888 9999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCc---chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHH-HHhhhhhhhhccc
Q 013609 86 STCFWLKLDP---NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAA-MGMLFLPSLVKYN 161 (439)
Q Consensus 86 ~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~ 161 (439)
++.+++++++ ++++.+++.|++.|++.+...+.....+.|++|+|+|++++++.+.+.++|.. .+|+++..+....
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 184 (452)
T PRK11273 105 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN 184 (452)
T ss_pred HHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence 9998887752 26888999999999999988888888999999999999999999999999864 4555443443445
Q ss_pred CCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCch-HHhhhcchhHHH
Q 013609 162 GPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIP-WKRIVVNLPVWA 240 (439)
Q Consensus 162 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 240 (439)
+||+.|++.+++.++..++..++.||+|++...+.+.+.. ++.+.. ..++++++++..+. .+.++|+|.+|.
T Consensus 185 gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (452)
T PRK11273 185 DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK--NDYPDD-----YNEKHEQELTAKQIFMQYVLPNKLLWY 257 (452)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh--hccccc-----cccccCCCccHHHHHHHHHHcChHHHH
Confidence 9999999998888777666666777776543211111000 000000 00000000111111 134678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHH
Q 013609 241 IVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFM 320 (439)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 320 (439)
..+..++.+...+....++|.|+++..|++..+++.......++.+++.++.|+++||+++++ +.........
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r-------~~~~~~~~~~ 330 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGN-------RGATGVFFMT 330 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------cchHHHHHHH
Confidence 888888888888888999999999988999989988888888999999999999999995433 0111111122
Q ss_pred HHHHHHhhhcc--cCChhHHHHHHHHHHHhhhccc-cccccc-ccccCCChhhHHHHHHHHHhhhhHHH-HHHHHHHhhc
Q 013609 321 VASIALMALPI--FRSSNGAIFCSSIALGFLALGR-AGFAVN-HMDIAPRYAGIVMGISNTAGTLAGIV-GVDMTGKLLE 395 (439)
Q Consensus 321 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~i-~~~~~g~l~~ 395 (439)
+..++...+.. ..+..... ......+...... ...... .+..|++.+|+++|+.+...++|+.+ +|.+.|.+.|
T Consensus 331 l~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~ 409 (452)
T PRK11273 331 LVTIATIVYWLNPAGNPTVDM-ACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD 409 (452)
T ss_pred HHHHHHHHHHHhcccChHHHH-HHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 22222222212 11222221 2222222221111 111222 34455689999999999999998765 7999999999
Q ss_pred cccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 396 AAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
.. +|+..|.++++.++++.+......+
T Consensus 410 ~~-----------g~~~~f~~~~~~~~~~~~~~~~~~~ 436 (452)
T PRK11273 410 FF-----------GWDGGFMVMIGGSILAVILLIVVMI 436 (452)
T ss_pred Hh-----------cchHHHHHHHHHHHHHHHHHHHHhc
Confidence 98 7999999888888877766665443
No 23
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-38 Score=277.92 Aligned_cols=383 Identities=19% Similarity=0.209 Sum_probs=329.1
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL 83 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 83 (439)
++.+.+.+....+...+.+..+...+++.+.+.+|+|+|++|.+++.++..+...+.-++.|.+.||+|.|++..++.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 45667788888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcc--hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc
Q 013609 84 WSSTCFWLKLDPN--NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN 161 (439)
Q Consensus 84 ~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 161 (439)
..+-++..+++.+ +++++++.+.+.|++.+ ......+.+++|+|||++|.++|+.. ..++|..+...+++.+....
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 9999998888852 45599999999999855 77999999999999999999999999 89999999999999999888
Q ss_pred C---CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccC-chHHhhhcchh
Q 013609 162 G---PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAK-IPWKRIVVNLP 237 (439)
Q Consensus 162 ~---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 237 (439)
+ ||..-.+..+..++..+..++..+|.|+.+... ++.. ..++.+.++|+
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~---------------------------~~~~~~~~~~v~~~~~ 219 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV---------------------------KPQLPAQLKAVFSNKD 219 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc---------------------------cccchhHHHHHhcCcc
Confidence 8 999999988888888888888888877753221 1111 55678899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHH
Q 013609 238 VWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTV 317 (439)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 317 (439)
.|.+.+.++....++.++..++|.|+++++|.++.+++.......+.+.+.++++|+++||+|.+| ....
T Consensus 220 ~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r----------v~~~ 289 (417)
T COG2223 220 TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRR----------VTLA 289 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchh----------HHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 6666
Q ss_pred HHHHHHHHHhhhcccC-------ChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHH
Q 013609 318 GFMVASIALMALPIFR-------SSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMT 390 (439)
Q Consensus 318 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~ 390 (439)
.+..++++........ +.......++....+.+.......-......|++.|.+.|+....+.+|+..-|...
T Consensus 290 ~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~ 369 (417)
T COG2223 290 VFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAF 369 (417)
T ss_pred HHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHH
Confidence 6666666665555442 223333334445555566666677777788889999999999999999999999999
Q ss_pred HHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 391 GKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 391 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
|...+.+ ++++..|+++..+.+++.+..+...+++
T Consensus 370 g~~~~~t----------g~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 370 GVSLDLT----------GSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHhc----------ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998 4799999999999988888777665554
No 24
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.8e-38 Score=297.94 Aligned_cols=390 Identities=13% Similarity=0.096 Sum_probs=280.5
Q ss_pred CCCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHH
Q 013609 3 NFPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFV 82 (439)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 82 (439)
.++++|..+..++++++.++++....+++.|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 83 LWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
+.+++.+++++++ +++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..+
T Consensus 86 ~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 86 LFSAGTLACGFAP-GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHHhc-cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999997 999999999999999999999999999999999999999999999999999999999999888766
Q ss_pred --CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhc-c-hhH
Q 013609 163 --PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVV-N-LPV 238 (439)
Q Consensus 163 --wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~ 238 (439)
||+.|++.++..++.. +.....||++++++++.++++..+...+..+. +...+...++.....++..+ + +.+
T Consensus 165 ~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
T TIGR00891 165 DGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALVRTMVDILYGG---EHRIANIVMTLAAAMVQSAGKRWPTF 240 (405)
T ss_pred ccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhhhhHHHHHhcc---chhhhhhhhhhhHHhhhhhhhhhHHH
Confidence 9999988665554433 33344566544321111111000000000000 00000000000011111111 1 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHH
Q 013609 239 WAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVG 318 (439)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 318 (439)
...................+.|.|+++.+|+++.+.+.+.....++.+++.++.+++.||+++|+ ....+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~----------~~~~~ 310 (405)
T TIGR00891 241 VYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK----------AYVCS 310 (405)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh----------hhHHH
Confidence 23333344445555567788999998889999999999999999999999999999999999988 55555
Q ss_pred HHHHHHHHh-hhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcc
Q 013609 319 FMVASIALM-ALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 319 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
......... .....++.........+...+.....+.......+ .++++|++++|+.+...++++.++|.+.|.+.|.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 311 LLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 544432222 22222232222222122222222222333333444 5558999999999999999999999999999998
Q ss_pred ccccccCCCCcccchhHHHHH
Q 013609 397 AKTTYSDLSSPESWRAVFFIP 417 (439)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~ 417 (439)
. +.|+.++...
T Consensus 391 ~----------g~~~~~~~~~ 401 (405)
T TIGR00891 391 L----------DEYGTALASL 401 (405)
T ss_pred c----------cccchhHHhh
Confidence 8 3477666543
No 25
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=8.5e-38 Score=298.28 Aligned_cols=392 Identities=15% Similarity=0.139 Sum_probs=287.4
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWS 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 85 (439)
+++..+...+...++...+.....+..|.+.+|+|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34556666677778888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc------
Q 013609 86 STCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK------ 159 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------ 159 (439)
++.+++++++ +++.+++.|+++|++.+.. +....+++|++|+++|++++++.+...++|..+++.+.+.+..
T Consensus 113 ~~~~~~~~~~-s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 113 PAVFCMSLVS-SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHHHHhc-CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999997 8999999999999998864 4466789999999999999999987777777777666554421
Q ss_pred ---ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcch
Q 013609 160 ---YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNL 236 (439)
Q Consensus 160 ---~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (439)
..|||+.|++.+++.++..++.+++.+++|+...+ +..++ .+.++++....+++.++++
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~-----~~~~~-------------~~~~~~~~~~~~~~~~~~~ 252 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR-----ELKKS-------------GTMPKDSFSKVLRYGVTNY 252 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh-----hHHhc-------------CccccccHHHHHHHHHcCc
Confidence 25899999999998887776666665554432200 00000 0000011123456778899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 237 PVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
++|...+..++.......+..+.|.|+.+.+|+++.+++.+.+...++.++++++.|+++||+++|+.. ..|+....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~---~~r~~~~~ 329 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGM---RGRLWALW 329 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCc---chhHHHHH
Confidence 998888777777666677888999999887899999999999999999999999999999999987521 11333444
Q ss_pred HHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcc
Q 013609 317 VGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
....+.++..+.+...++........++.........+.......+..|+++|++.|+.+...++|+.++|.+.+ .+.
T Consensus 330 ~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~ 407 (476)
T PLN00028 330 IVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF--TGS 407 (476)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH--hcC
Confidence 444444444444444443332222222222221222233344455677889999999998877777777776653 111
Q ss_pred ccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 397 AKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
. ++|+..|.+.+++.+++.++.++.+
T Consensus 408 ~----------~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 408 S----------YSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred C----------ccHhhHHHHHHHHHHHHHHHHHhee
Confidence 1 3799999999988888888877765
No 26
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=7e-38 Score=296.89 Aligned_cols=365 Identities=15% Similarity=0.139 Sum_probs=273.4
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
+.++..+..++++++.+.++.....+..|.+.+|+|+|+.+.+++.+++.+++.+++++.|+++||+|||+++.++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45566788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCc
Q 013609 85 SSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPN 164 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr 164 (439)
+++.+++++++ +++.++++|+++|++.+...+....++.|++|+|+|+++.++...+..+|.++++.+.+.+.+..+||
T Consensus 94 ~~~~~~~~~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 94 SVGTGLSGLAS-GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHHh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 99999999997 99999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHH
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVN 244 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (439)
+.|++.....++ .+......||++++.+++.+.++ + +.+...+....++++++++|.++.....
T Consensus 173 ~~f~i~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~---------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (426)
T PRK12307 173 AAFFVGLLPVLL-VIYIRARAPESKEWEEAKLSGKG---------K------HSQSAWSVFSLSMKGLFNRAQFPLTLCV 236 (426)
T ss_pred HHHHHHHHHHHH-HHHHHHHCCCChHHHHhhhhccc---------c------ccccchhhhhHHHHHHHhhchHHHHHHH
Confidence 999875443322 22222222333222111100000 0 0000011122356788888877654433
Q ss_pred H---HHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHH
Q 013609 245 N---FTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMV 321 (439)
Q Consensus 245 ~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 321 (439)
. +......+.+..++|.|+++ .|.++.+.+.+.....++.++++++.+++.||+++|+ ....+.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~----------~~~~~~~~ 305 (426)
T PRK12307 237 FIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK----------TFSIGLLM 305 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH----------HHHHHHHH
Confidence 2 22233334567889999988 6999988998888899999999999999999999988 66666655
Q ss_pred HHHHHhhhcccC-ChhHHHHHHHHHHHhhhc-ccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 322 ASIALMALPIFR-SSNGAIFCSSIALGFLAL-GRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 322 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
..+..+.....+ +.........++.++... ..+.......+ .++++|+++.|+.+...++++.++|.+.|++.+..
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 306 SFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 555444333222 222222222222222211 11222233344 45578999999999999999999999999999987
No 27
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=3e-37 Score=292.00 Aligned_cols=387 Identities=13% Similarity=0.102 Sum_probs=273.4
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHH-HHHhh--CCCccchhhhh-----hhhhhhhhhhcccccccccccCchHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTA-AADAA--GVNQSSKGTIL-----STFYYGYACSQVPGGWAAQKIGGRKVL 77 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~~l 77 (439)
+++.......++.+++++|...++.+.|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 45567778888999999999999988875 55555 56665 45554 345566788999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCcchHH--------HHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHH
Q 013609 78 LFSFVLWSSTCFWLKLDPNNVF--------ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAM 149 (439)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 149 (439)
..+.++++++++++++++ |++ .+++.|+++|++.|..++....++.|++|+|+|++..+....+..+|..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 98 MLTVWMMGIATALIGLLP-SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999998 876 58899999999999999999999999999999999999999999999999
Q ss_pred Hhhhhhhhh--------cccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccccc
Q 013609 150 GMLFLPSLV--------KYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSA 221 (439)
Q Consensus 150 g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (439)
+..+...+. +.+|||++|++.+++.++. +......||+|++.+++.+.+ +
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~~~---------------------~ 234 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHEQA---------------------A 234 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhhcc---------------------c
Confidence 887766654 2579999999887765443 222334456554321110000 0
Q ss_pred ccccCchHHhhhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 013609 222 MKAAKIPWKRIVVNLPVWAIVV-NNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLI 300 (439)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 300 (439)
.+++....+.+.++|+.+.... ..++.....+....+.|.|+++.+|++...........++...++.++.|+++||++
T Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~g 314 (438)
T PRK09952 235 AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFG 314 (438)
T ss_pred ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0001111234667777666543 455566677788899999998888988776555555667777888899999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHHhhhc--c-cCChhHH-HHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHH
Q 013609 301 TKRILSVTRTRKFLNTVGFMVASIALMALP--I-FRSSNGA-IFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGIS 375 (439)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~ 375 (439)
||+ ....+.++..+....+. . ..+.... ....++.....+...+.......|..| +.|+++.|+.
T Consensus 315 rr~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~ 384 (438)
T PRK09952 315 RRR----------VYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVG 384 (438)
T ss_pred chH----------HHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHH
Confidence 988 55555444433322111 1 1222222 222222222222223334455556555 7899999997
Q ss_pred HHHhh-hhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 376 NTAGT-LAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 376 ~~~~~-~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
+.... +++.++|.+.+++.|..+ ++|...+.+.+++.+++.+..+..++++
T Consensus 385 ~~~~~~lgg~~~p~i~g~l~~~~~---------~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 385 YQVASVVGGGFTPFIAAALVTYFG---------GSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---------CCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 66654 899999999999998651 2578888888888888877777665543
No 28
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=5.9e-38 Score=302.66 Aligned_cols=376 Identities=16% Similarity=0.191 Sum_probs=297.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTC 88 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 88 (439)
+.+..++++.++..++....++..|.+.+|+|.+.++.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHH
Q 013609 89 FWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFN 168 (439)
Q Consensus 89 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~ 168 (439)
+++++++ |++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..++|.+++.+.++.+||+.|+
T Consensus 82 ~~~~~~~-~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 82 LLCGVAP-NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHHhCcC-CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 9999997 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhhhccCCCCCCCCCCCcccc---------------cCccCcccchhh-------------hhccccc
Q 013609 169 AEAALGGMWSLLWFKYATDPPRSEHPKASAAGF---------------GESLLPMRDQKV-------------KVDNGGS 220 (439)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~-------------~~~~~~~ 220 (439)
+.+.++++..++..+..||++++.+++.|..+. ..++.++.+... .....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 998888777666666666654433222221110 000000000000 0000011
Q ss_pred cccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 013609 221 AMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLI 300 (439)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 300 (439)
+.+++..+ .+++|+|+++...+..++.....+....++|.|+++.+|+++.+++....+..++.+++.++.|++.||++
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~ 319 (485)
T TIGR00711 241 TDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKID 319 (485)
T ss_pred cCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 11222223 46889999998888888888888889999999999989999999999999999999999999999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHHhhhcc--cC--ChhHHH-HHHHHHHHhhhcccccccccccccCCChhhHHHHHH
Q 013609 301 TKRILSVTRTRKFLNTVGFMVASIALMALPI--FR--SSNGAI-FCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGIS 375 (439)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 375 (439)
+|+ ....+..+.+++...+.. .+ +..... ...+.+.+.+....+......++.+++++++++|+.
T Consensus 320 ~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 389 (485)
T TIGR00711 320 PRK----------LVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLS 389 (485)
T ss_pred cHH----------HHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHH
Confidence 988 777777777766665542 12 112222 223334444333344445555667779999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhcc
Q 013609 376 NTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 376 ~~~~~~g~~i~~~~~g~l~~~ 396 (439)
+..+++|+.+|+.+.+.+.++
T Consensus 390 ~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 390 NFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999874
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=5.6e-38 Score=293.19 Aligned_cols=368 Identities=18% Similarity=0.243 Sum_probs=277.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCc
Q 013609 16 ISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDP 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 95 (439)
++++..+.++..+++..|.+.+++|.++.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHh-hhhhhhhcccCCchhHHHHhHHH
Q 013609 96 NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGM-LFLPSLVKYNGPNSVFNAEAALG 174 (439)
Q Consensus 96 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~~wr~~f~~~~~~~ 174 (439)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+..+||+.|++.+++.
T Consensus 82 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 -SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred -hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 57777777889999999998888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHH
Q 013609 175 GMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYV 254 (439)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (439)
++..++.++..||+|++++.+.++++..++. +.. +++.+++.+......++++++|.++...+..++.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNEEP-DGD-----AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTG 234 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCccccc-ccc-----cccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 7766666667777665432211111110000 000 0000011112223456788999999998888888888889
Q ss_pred HHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccC-
Q 013609 255 LMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFR- 333 (439)
Q Consensus 255 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 333 (439)
...+.|.|+++..|+++.+.+.......++.+++.++.+++.||..+++ +.....................+
T Consensus 235 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 307 (379)
T TIGR00881 235 ILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR-------RGPLAVFFMALIIVSLLVYWLNPA 307 (379)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHHHhcCcc
Confidence 9999999999889999999999999999999999999999999875444 11122222222222222222211
Q ss_pred ChhHHHHHHHHHHHhhh-ccccccccc-ccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 334 SSNGAIFCSSIALGFLA-LGRAGFAVN-HMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 334 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
..........+..+... ...+..... .+..++++|+++.|+.+...++|+.++|.+.|.+.|..
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 308 ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 11112222222222221 111222233 34455689999999999999999999999999999987
No 30
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=4e-37 Score=287.03 Aligned_cols=366 Identities=14% Similarity=0.118 Sum_probs=280.8
Q ss_pred HHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHH-HHHHHHHHHhhhcC
Q 013609 16 ISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLF-SFVLWSSTCFWLKL 93 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~ 93 (439)
+.+++..+......+.+|. +.+++|.|+.+.|++.+.+.+...+.+++.|+++||+||||.++. +..+..++..++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 4467777788888888887 568899999999999999999999999999999999999887654 56666677788888
Q ss_pred CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchh--hHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHh
Q 013609 94 DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRS--VSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEA 171 (439)
Q Consensus 94 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~ 171 (439)
++ |++.+++.|+++|.+.+...|...++..|+.|+++|++. .+....+.++|..++|++++.+.+..+||+.|++.+
T Consensus 84 ~~-~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 84 NR-NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred cc-hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 87 999999999999988888889999999999887777654 578888889999999999999999899999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHH
Q 013609 172 ALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYA 251 (439)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (439)
+..++..+..++..||+|++++++. ...+.++.+++|+++......++....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGAL----------------------------TRLEVRGLLASRDTRLLFVACTLMWGC 214 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCccccc----------------------------CcchhhhhhcCcchHHHHHHHHHHHHH
Confidence 8877777666666777654321100 011223466777777666666655555
Q ss_pred HHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 013609 252 LYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI 331 (439)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (439)
......+.|.++++.+|.++.+.+.+.........++..+.+++.||+++|+ ....+.+...+.......
T Consensus 215 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~----------~~~~~~~~~~~~~~~~~~ 284 (375)
T TIGR00899 215 NILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR----------LMLLAALAGVAFYTGLAA 284 (375)
T ss_pred HHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh----------HHHHHHHHHHHHHHHHHH
Confidence 5666778899998889999999988877777778888899999999999988 555555554444444433
Q ss_pred cCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccch
Q 013609 332 FRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWR 411 (439)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 411 (439)
.++.+.......+.....+...+.......+..|++++++.++.+...++|..++|.+.|.+.|.. +|+
T Consensus 285 ~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-----------g~~ 353 (375)
T TIGR00899 285 DNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERW-----------SYH 353 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------cch
Confidence 333333332222222222223334445566777888889999999999999999999999999987 799
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 013609 412 AVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~ 431 (439)
..+.+.+++.+++.+...++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 354 AVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred hHHHHHHHHHHHHHHHHhee
Confidence 99999988888887776554
No 31
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=3.8e-37 Score=291.89 Aligned_cols=403 Identities=18% Similarity=0.260 Sum_probs=290.9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHH
Q 013609 7 RYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSS 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 86 (439)
++..+....+.+...+.++..+....|.+.+ +|.|+++.+++.+++.++..+++++.|+++||+|||+.+..+.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4556666777788888888888888888776 599999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCc---chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc-ccC
Q 013609 87 TCFWLKLDP---NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK-YNG 162 (439)
Q Consensus 87 ~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~ 162 (439)
+.+++++.+ ++++.+.+.|++.|++.+...+.....+.|++|+++|++++++.+.+..+|..+++.+.+...+ ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 988877642 2678888999999999999999999999999999999999999999999999999887765444 579
Q ss_pred CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCch-HHhhhcchhHHHH
Q 013609 163 PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIP-WKRIVVNLPVWAI 241 (439)
Q Consensus 163 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 241 (439)
||+.|++.++++++..+..+++.||+|++...+..++. +.+.+.... ++ ++++.+.++. .+.++|+|.+|..
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEY--RNDYPDDYN----EK-AEQELTAKEIFMQYVLPNKLLWYI 256 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhc--ccccccccc----cc-cccccchHHHHHHHHccCchHHHH
Confidence 99999999988887766666677776654311110000 000000000 00 0000111111 2347889999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHH
Q 013609 242 VVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMV 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 321 (439)
.+..++.+...++...+.|.|+++..|+++.+++....+..+..++++++.|++.||+++++. ..........
T Consensus 257 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-------~~~~~~~~~~ 329 (438)
T TIGR00712 257 AIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNR-------GATGVFFMTL 329 (438)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-------cHHHHHHHHH
Confidence 888888888888889999999999889999999998889999999999999999999975541 0111111111
Q ss_pred HHHHHhhhccc--CChhHHHHHHHHHHHhhhcccccc-cccc-cccCCChhhHHHHHHHHHhhhhH-HHHHHHHHHhhcc
Q 013609 322 ASIALMALPIF--RSSNGAIFCSSIALGFLALGRAGF-AVNH-MDIAPRYAGIVMGISNTAGTLAG-IVGVDMTGKLLEA 396 (439)
Q Consensus 322 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~g~~~~~~~~g~-~i~~~~~g~l~~~ 396 (439)
..++...+... .+.... ....+..+.....+... .... +..++++|++++|+.+...++++ .++|.+.|.+.|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~ 408 (438)
T TIGR00712 330 VTIAVIVYWMNPAGNPLVD-MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF 408 (438)
T ss_pred HHHHHHHHHhcCCCchHHH-HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh
Confidence 11111111111 122221 12222222222221111 1223 34455899999999999988875 6899999999998
Q ss_pred ccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 397 AKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
. +|+.++.+..++.+++.+..+.+.++||
T Consensus 409 ~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 409 F-----------GWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred c-----------cchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 7 7999999888888888887777777665
No 32
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=1.3e-36 Score=285.12 Aligned_cols=378 Identities=16% Similarity=0.122 Sum_probs=279.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTC 88 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 88 (439)
+.+....++.++.........+..+.+.+|+|.|+++.|++.+.+.+++.++.++.|+++||+||||++..+..+.+++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 34555566666666666666667777889999999999999999999999999999999999999999999999998887
Q ss_pred hhh---cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHH-HHHhhhhhhhhcccCCc
Q 013609 89 FWL---KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGA-AMGMLFLPSLVKYNGPN 164 (439)
Q Consensus 89 ~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~~wr 164 (439)
+++ +....+++.+++.|+++|++.+...+...+.+.|++|+|+|++++|+.+...++|. .++|.+++.+.+..||+
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~ 172 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEM 172 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH
Confidence 654 34322788999999999999888888888889999999999999999999999997 68999999998888977
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHH
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVN 244 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (439)
..++.......+..++..+..+|.+++++++ + + ++.++..+++++++|+|+++...+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (402)
T TIGR00897 173 NTLWSALAFVLTGGVIALFSNKDIFTPQHMQ-T-R--------------------EKFSELGKAATILFTNPNVLLGGMV 230 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCccccc-C-C--------------------cchhhHHHHHHHHHcChhHHHHHHH
Confidence 6666554443333333444444432211110 0 0 0001112345678999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH-HHHHHHHH
Q 013609 245 NFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN-TVGFMVAS 323 (439)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~ 323 (439)
.++.....+....+.|.|+++ +|+++.+.+.+.....++..++.+..|+++||+++|+ .. ..+.+..+
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~----------~~~~~~~l~~~ 299 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN----------TVRWFGGVGCG 299 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh----------HHHHHHHHHHH
Confidence 888888888899999999977 8999999888888889999999999999999999877 22 22222222
Q ss_pred HHHhh---hcc--cCChhHH-HHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 324 IALMA---LPI--FRSSNGA-IFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 324 ~~~~~---~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
+.... ... .++.... ......+.+.... .+ ......+.+|++|+++.|+.+...++++.++|.+.|.+.|..
T Consensus 300 ~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 377 (402)
T TIGR00897 300 IFTLALYYIPQHFGHSFAVALIIAIALGIFLAGY-VP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF 377 (402)
T ss_pred HHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH-HH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 22111 111 1222222 2223333333332 22 233445678889999999999999999999999999999988
Q ss_pred cccccCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 398 KTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
++...+++.+++.+++.+...+++
T Consensus 378 -----------g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 378 -----------GAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHHhc
Confidence 788899988888888777666553
No 33
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=4.3e-37 Score=296.30 Aligned_cols=415 Identities=14% Similarity=0.122 Sum_probs=282.1
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhh-----CCCccchhhhhhhhhhhhhhhcccccccccccCchHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAA-----GVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLL 78 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~ 78 (439)
.+.++..+.++.++.+.+++|....+.+.|.+.+++ +.+..+.+++.+.+.+++.++++++|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 345677788889999999999999999999887753 344557789999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCcch------HHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhh
Q 013609 79 FSFVLWSSTCFWLKLDPNN------VFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGML 152 (439)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 152 (439)
++.++..++.+++++++ + ++.++++|+++|++.|...+....+++|++|+++|++++++.+....+|..+++.
T Consensus 91 ~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 91 MELIIMIIATVASGLSP-GSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HHHHHHHHHHHHHHHcc-CcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988876 4 7899999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhc-----------------------ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCccc-ccCcc---
Q 013609 153 FLPSLVK-----------------------YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAG-FGESL--- 205 (439)
Q Consensus 153 ~~~~l~~-----------------------~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--- 205 (439)
++..+.. .++||+.|.+.++++++..+. .++.||+|++...++++++ ..+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~~~~~~~a~~~~~~~ 248 (502)
T TIGR00887 170 VALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADVAKDVEQAASDMSAV 248 (502)
T ss_pred HHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHhCcchHHHHHHHHHH
Confidence 8765432 247999998887776654444 4577999997543333221 11000
Q ss_pred -Ccccchhhhh-ccccccccccCchHHhhhcc---hhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccch
Q 013609 206 -LPMRDQKVKV-DNGGSAMKAAKIPWKRIVVN---LPV----WAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGS 276 (439)
Q Consensus 206 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 276 (439)
.+..++..++ ++.++++++...++++++++ ++. +......+.....+++...+.|.++++ .|+++.+.+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~ 327 (502)
T TIGR00887 249 LQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATN 327 (502)
T ss_pred hccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccch
Confidence 0000000000 00000011112356666653 222 112223344455566777788999976 7887654321
Q ss_pred ------------hhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccC---ChhHHHHH
Q 013609 277 ------------SKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFR---SSNGAIFC 341 (439)
Q Consensus 277 ------------~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 341 (439)
......++.+++.++.+++.||+|||+ +...+..+.+++...+.... +.......
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~----------~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 397 (502)
T TIGR00887 328 NAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKP----------IQLMGFFILTVLFFVLGFAYNHLSTHGFLAI 397 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh----------HHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 123344566778889999999999998 66666655555444433211 11111122
Q ss_pred HHHHHHhh-hcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHH
Q 013609 342 SSIALGFL-ALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGL 419 (439)
Q Consensus 342 ~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (439)
..+...+. ....+....+..|..| +.|+++.|+.+.+.+++++++|.+.+.+.|..+..+. .+...++...+.+.++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~ 476 (502)
T TIGR00887 398 YVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKG-YPTGIWMGHVLEIFAL 476 (502)
T ss_pred HHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccc-ccccccchHHHHHHHH
Confidence 22222222 2223344455567766 7899999999999999999999999999885411100 0000245667888888
Q ss_pred HHHHHHHHHHHhc
Q 013609 420 LCILSSFVFLLFS 432 (439)
Q Consensus 420 ~~~~~~~~~~~~~ 432 (439)
+++++.+..++++
T Consensus 477 ~~~~~~i~~~~lp 489 (502)
T TIGR00887 477 FMFLGILFTLLIP 489 (502)
T ss_pred HHHHHHHHheEec
Confidence 8777766655444
No 34
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1e-36 Score=285.35 Aligned_cols=346 Identities=15% Similarity=0.130 Sum_probs=271.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhh
Q 013609 12 ILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWL 91 (439)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 91 (439)
..+....++...+...+.+..|.+.+|+|.|+++.+++.+++.++..+++++.|+++||+|||+++..+.++..++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 33444456667788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHh
Q 013609 92 KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEA 171 (439)
Q Consensus 92 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~ 171 (439)
++++ +++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.++.+||+.|++.+
T Consensus 88 ~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 166 (385)
T TIGR00710 88 ALSN-NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLS 166 (385)
T ss_pred HHHc-cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 9996 999999999999999999999999999999999999999999999999999999999999999899999999988
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHH
Q 013609 172 ALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYA 251 (439)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (439)
+..++..+..++..||++++++++ +.++..+++++.+|+|+++...+........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR00710 167 LAGILLSALIFFILPETLPYEARI-------------------------QISTYFETFLLLLKSKMFWGYALIYGASFGG 221 (385)
T ss_pred HHHHHHHHHHHHhCCCCCCCcccC-------------------------CHHHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 887776666665666654332110 0011223456788999998888777777777
Q ss_pred HHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 013609 252 LYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI 331 (439)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (439)
......+.|.++++.+|.++.+.+.+.....++.+++.++.+++.||+++|+ ....+..+..++...+..
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS----------LLRMGLILFAVSAVLLEI 291 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH----------HHHHHHHHHHHHHHHHHH
Confidence 7788888899998889999999999999999999999999999999999888 555455444444333322
Q ss_pred c---C-ChhHHHHHHH--HHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhh
Q 013609 332 F---R-SSNGAIFCSS--IALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLL 394 (439)
Q Consensus 332 ~---~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 394 (439)
. . +......... .+.+... ..+.......+..|++++++.++.+...+.++.+.+.+.+.+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~ 359 (385)
T TIGR00710 292 TAILGLGSWAMIIGPMMFVGIGNSM-ISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIH 359 (385)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 1 1122222211 2222222 2233344445556788999999999998887777777777443
No 35
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.4e-36 Score=285.02 Aligned_cols=356 Identities=13% Similarity=0.111 Sum_probs=249.1
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhh-hhh-----hhhhhhhcccccccccccCchHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTIL-STF-----YYGYACSQVPGGWAAQKIGGRKVL 77 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~-s~~-----~~~~~~~~~~~g~l~dr~Grr~~l 77 (439)
+..|++....++++.+++++|+..+++..|.+.+|++.++.+.+... +.. .++..+++++.|+++||+|||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 89 (434)
T PRK15075 10 RESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL 89 (434)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH
Confidence 34566678889999999999999999999999999999888865443 332 222346889999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCcchHH--------HHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHH
Q 013609 78 LFSFVLWSSTCFWLKLDPNNVF--------ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAM 149 (439)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 149 (439)
+.+.+++.++++++++++ +++ .++++|+++|++.+...+....+++|++|+|+|++++++...+..+|..+
T Consensus 90 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~ 168 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVP-GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF 168 (434)
T ss_pred HHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH
Confidence 999999999999999997 776 46899999999999999999999999999999999999999988888888
Q ss_pred Hhhhhhhhh--------cccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccccc
Q 013609 150 GMLFLPSLV--------KYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSA 221 (439)
Q Consensus 150 g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (439)
++.+++.+. +.+|||++|++......+ ........||+++..++ ++
T Consensus 169 g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~-------------------------~~ 222 (434)
T PRK15075 169 AALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-IFLIRRSLEETEEFLAR-------------------------KH 222 (434)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHh-------------------------hh
Confidence 887777652 468999999875443211 11111111221110000 00
Q ss_pred ccccCchHHhhhcchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 013609 222 MKAAKIPWKRIVVNLPVWAI-VVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLI 300 (439)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 300 (439)
+.+.++.+++..++++.+.. ....++....++....|.|.|+++.+|++..+.++......++.+++.++.|+++||++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g 302 (434)
T PRK15075 223 RPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIG 302 (434)
T ss_pred ccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00111223344555555443 33344456667788899999999888999999888888888999999999999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHH-hh---hcccCChhHHHH-HHHHHHHhhhcccccccccccc-cCCChhhHHHHH
Q 013609 301 TKRILSVTRTRKFLNTVGFMVASIAL-MA---LPIFRSSNGAIF-CSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGI 374 (439)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~ 374 (439)
||+ ....+..+..... .. ....++...... ..+.+.+.+. ..+.......| .|++.|+++.|+
T Consensus 303 ~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~e~~p~~~rg~~~g~ 371 (434)
T PRK15075 303 RRP----------VLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGS-YNGAMVVALTEVMPAEVRTAGFSL 371 (434)
T ss_pred chH----------HHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH-HHhhHHHHHHHHCCCCccchheeH
Confidence 888 4444333222211 11 111112211212 2222222222 22222333344 555899999999
Q ss_pred HHHHhhh-hHHHHHHHHHHhhccc
Q 013609 375 SNTAGTL-AGIVGVDMTGKLLEAA 397 (439)
Q Consensus 375 ~~~~~~~-g~~i~~~~~g~l~~~~ 397 (439)
.+..... ++.++|.+.|++.|..
T Consensus 372 ~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 372 AYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHhc
Confidence 7665554 5888999999999987
No 36
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.5e-36 Score=291.20 Aligned_cols=379 Identities=14% Similarity=0.132 Sum_probs=289.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHH
Q 013609 8 YLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSST 87 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 87 (439)
.+.+..++++.++..++...+.+..|.+.+|+|.++.+.+++.+.+.++..++.+++|+++||+|||+++..+..+.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 34566778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhH
Q 013609 88 CFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVF 167 (439)
Q Consensus 88 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f 167 (439)
.+++++++ +++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..++|.+++.+.++.+||+.|
T Consensus 89 ~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f 167 (471)
T PRK10504 89 SLFCALSG-TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIF 167 (471)
T ss_pred HHHHHHhC-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHH
Confidence 99999987 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccc---------------cCccCcccchh------------hhhccccc
Q 013609 168 NAEAALGGMWSLLWFKYATDPPRSEHPKASAAGF---------------GESLLPMRDQK------------VKVDNGGS 220 (439)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~------------~~~~~~~~ 220 (439)
++..+...+..+......|+.+.+. .+.|.... ..+........ .....++.
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYTMQT-RRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHAR 246 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCccccC-CCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9988777766665555555443322 12121100 00000000000 00000011
Q ss_pred cccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 013609 221 AMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLI 300 (439)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 300 (439)
+.+++..+ .+++|||+++......++..........+.|.|+++..|.++.+.++......++.+++.++.+++.||++
T Consensus 247 ~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g 325 (471)
T PRK10504 247 NNNRALFS-LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFG 325 (471)
T ss_pred cCCCCccC-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11222334 35889999999888888888887777888999999888999999999888888888888899999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHHhhhcccC--ChhHHH--HHHHHHHHhhhcccccccccccccCCChhhHHHHHHH
Q 013609 301 TKRILSVTRTRKFLNTVGFMVASIALMALPIFR--SSNGAI--FCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISN 376 (439)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 376 (439)
+|+ .+..+..+.++....+...+ +..... ...+.+.+......+......+..++++++.++|+.+
T Consensus 326 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 395 (471)
T PRK10504 326 YRR----------VLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLS 395 (471)
T ss_pred chH----------HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHH
Confidence 988 66666666665544444322 211111 1222223333233333334445566789999999999
Q ss_pred HHhhhhHHHHHHHHHHhhccccc
Q 013609 377 TAGTLAGIVGVDMTGKLLEAAKT 399 (439)
Q Consensus 377 ~~~~~g~~i~~~~~g~l~~~~~~ 399 (439)
...++|..+|+.+.|.+.+..+.
T Consensus 396 ~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 396 MIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999887643
No 37
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.1e-36 Score=293.12 Aligned_cols=407 Identities=14% Similarity=0.142 Sum_probs=277.0
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhh--------CCCccchhhhhhhhhhhhhhhcccccccccccCchHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAA--------GVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVL 77 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l 77 (439)
.....+....++.+.++++...+++..|.+.+++ +.++.+.+++.+++.++..++++++|+++||+|||+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~ 88 (479)
T PRK10077 9 YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL 88 (479)
T ss_pred HHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3456677778889999999999999999999887 78889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCC---------c--chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHH
Q 013609 78 LFSFVLWSSTCFWLKLD---------P--NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLG 146 (439)
Q Consensus 78 ~~~~~~~~~~~~~~~~~---------~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 146 (439)
.++.+++.++.+.++++ + ++++.++++|+++|++.|...+...++++|++|+|+|++++++.+.+..+|
T Consensus 89 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G 168 (479)
T PRK10077 89 KIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFG 168 (479)
T ss_pred HHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHH
Confidence 99999999888877753 1 136778999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhh--------cccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccC---ccCcccchhhhh
Q 013609 147 AAMGMLFLPSLV--------KYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGE---SLLPMRDQKVKV 215 (439)
Q Consensus 147 ~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 215 (439)
..+++.++..+. +..|||+.|++.+++.++..+. .++.||+|++...+.+.++..+ +.....+.....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (479)
T PRK10077 169 QLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQAL 247 (479)
T ss_pred HHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHH
Confidence 999988766543 3579999999988877776544 4567888765322222111100 000000000000
Q ss_pred ccccccccccCchHHhhhcchhHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHH
Q 013609 216 DNGGSAMKAAKIPWKRIVVNLPVWA---IVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIG 292 (439)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 292 (439)
++.....++.....+..+....... .....+......+....+.|.+.++ .|.+..+........++..+++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~ 326 (479)
T PRK10077 248 QEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLA 326 (479)
T ss_pred HHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000001111000000 1111122222334455667877766 78887777777777888899999999
Q ss_pred HHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc---CChh-HHH-HHHHHHHHhhhcccccccccccccCC-C
Q 013609 293 GVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIF---RSSN-GAI-FCSSIALGFLALGRAGFAVNHMDIAP-R 366 (439)
Q Consensus 293 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 366 (439)
+++.||+++|+ +...+..+.+++.+.+... +... ... .......++.....+.......|..| +
T Consensus 327 g~l~dr~g~r~----------~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 396 (479)
T PRK10077 327 IMTVDKFGRKP----------LQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNA 396 (479)
T ss_pred HHHHHHhcChH----------HHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChh
Confidence 99999999998 7777777776666554322 1111 111 12222222322223445555666555 7
Q ss_pred hhhHHHHHHHHHhhhhHHHHHHHHHHhh------ccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 367 YAGIVMGISNTAGTLAGIVGVDMTGKLL------EAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 367 ~~~~~~g~~~~~~~~g~~i~~~~~g~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
+|+++.|+.+...+++..+++.+.+.+. |.. ++...|++.++.++++.++.+.+.+++
T Consensus 397 ~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 397 IRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF-----------HNGFSYWIYGCMGVLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc-----------cCccHHHHHHHHHHHHHHHHHhccccC
Confidence 9999999999999999999988877555 333 567778887777777766665554443
No 38
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=3.5e-36 Score=277.86 Aligned_cols=374 Identities=13% Similarity=0.111 Sum_probs=285.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHHHH-hhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHH
Q 013609 8 YLIVILTFISTCVCYIERVGFSIAYTAAAD-AAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSS 86 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 86 (439)
++.+....++.++.+......+++.+.+.+ |+|+|++|.+++.+++.+++.+..++.|++.||+|.|+++.++.++.++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 467888888999999999999999999876 8999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCC-----cchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhh---
Q 013609 87 TCFWLKLD-----PNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLV--- 158 (439)
Q Consensus 87 ~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--- 158 (439)
.++..+++ + |++.+++.|++.|++ +..++.....+++|+|+|+||+++|+.....++|..+++++.+.+.
T Consensus 113 ~~~~~~~a~~~~~~-s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~ 190 (462)
T PRK15034 113 PCVWLGIAVQNPNT-PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP 190 (462)
T ss_pred HHHHHHHHHcccCC-CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999876 6 899999999999998 6688999999999999999999999997777777776666554433
Q ss_pred --c-------------ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccccccc
Q 013609 159 --K-------------YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMK 223 (439)
Q Consensus 159 --~-------------~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (439)
+ ..+||.+.++..++.++..++.++..+|.++. +
T Consensus 191 l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-------------------------------~ 239 (462)
T PRK15034 191 VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS-------------------------------R 239 (462)
T ss_pred HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-------------------------------c
Confidence 2 23477777788877777666666665443321 1
Q ss_pred ccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 013609 224 AAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 303 (439)
....+..+++|+|+.|..++.+++.+..+.++..++|.|.++.+ +.........+..+...+.++++|+++||+|+++
T Consensus 240 ~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~ 317 (462)
T PRK15034 240 ASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR 317 (462)
T ss_pred cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH
Confidence 11234567999999999999999999999999999999998854 3333322234456778888999999999999998
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHhh-hcccC-----ChhHHHHHHHHHHHhhhcccccccccccccCC------------
Q 013609 304 ILSVTRTRKFLNTVGFMVASIALMA-LPIFR-----SSNGAIFCSSIALGFLALGRAGFAVNHMDIAP------------ 365 (439)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 365 (439)
++..+.+...+.... +...+ +.......++..+...+.......-......|
T Consensus 318 ----------vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~ 387 (462)
T PRK15034 318 ----------VTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGG 387 (462)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhccccccc
Confidence 666666544444322 11111 11222222222222223333333322222222
Q ss_pred ----------ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 366 ----------RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 366 ----------~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
++.|.+.|+....+.+|+.+-|.+.|...+.. +++...|+.+.+..+++..+.+....++
T Consensus 388 ~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~----------g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 388 SDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT----------GSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred chhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc----------CCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 16789999999999999999999999999888 5899999999999999888887765544
Q ss_pred c
Q 013609 436 R 436 (439)
Q Consensus 436 ~ 436 (439)
+
T Consensus 458 ~ 458 (462)
T PRK15034 458 K 458 (462)
T ss_pred C
Confidence 3
No 39
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=4.8e-36 Score=279.56 Aligned_cols=366 Identities=13% Similarity=0.092 Sum_probs=275.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHh
Q 013609 10 IVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCF 89 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 89 (439)
.+..+.++.++...+.....+.+|.+.+|+|.|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHH
Q 013609 90 WLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNA 169 (439)
Q Consensus 90 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~ 169 (439)
.+++++ |++.+++.|+++|++.+...+...+.+.|..++++|+++++....+.++|..+|+.+++.+.+...|+..+ .
T Consensus 87 ~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-~ 164 (381)
T PRK03633 87 GLGLMV-GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW-V 164 (381)
T ss_pred HHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH-H
Confidence 999997 99999999999999999888888888889999999999999999999999999999999987754444333 3
Q ss_pred HhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHH
Q 013609 170 EAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFH 249 (439)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (439)
.+........+.+ . +.++++. + + ++..+.++.+|+|.++......+...
T Consensus 165 ~~~~~~~~~~~~~-~-~~~~~~~-~-------------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (381)
T PRK03633 165 TGLVLAAILPLLF-T-RILNQQA-E-------------------------N---HDSTSIWPMLKLRQARLGVNGCIISG 213 (381)
T ss_pred HHHHHHHHHHHHH-h-cccCCCC-C-------------------------C---CCCCCHHHHHHhcchHHHHHHHHHHH
Confidence 2222222221221 1 1111111 0 0 01123456778888776555455555
Q ss_pred HHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhh
Q 013609 250 YALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMAL 329 (439)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (439)
..+.....++|.|+++ .|.++.+.+.+.+...+..++++...+++.||+++|+ .+..+..+..++....
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~----------~l~~~~~~~~~~~~~~ 282 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL----------VLRVQVFVVILGSIAM 282 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH----------HHHHHHHHHHHHHHHH
Confidence 5666677889999987 6999999998888889999999999999999999988 6666666655554433
Q ss_pred cccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCccc
Q 013609 330 PIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPES 409 (439)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~ 409 (439)
. ..........+.+.+.....+.......+..++++++...+..+...++|+.++|.+.|.+.|+. +
T Consensus 283 ~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-----------g 349 (381)
T PRK03633 283 L--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-----------S 349 (381)
T ss_pred h--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------C
Confidence 2 11222222222332222223222233344455567788888888889999999999999999988 7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhc
Q 013609 410 WRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
++..|.+.+.+.++..+..++.+
T Consensus 350 ~~~~f~~~~~~~l~~~~~~~~~~ 372 (381)
T PRK03633 350 DNLLFIMIASVSFIYLLMLLRKA 372 (381)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcc
Confidence 88899888888776665555443
No 40
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.4e-35 Score=278.70 Aligned_cols=372 Identities=16% Similarity=0.160 Sum_probs=275.6
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
+.++.+..+.+..++..++.....+.+|. +.+++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 44556677888889999999999999997 67889999999999999999999999999999999999999999999988
Q ss_pred HHHHhhhcCC---c----chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhh
Q 013609 85 SSTCFWLKLD---P----NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSL 157 (439)
Q Consensus 85 ~~~~~~~~~~---~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 157 (439)
+++.+.++++ + .+++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+....+|..+|+.+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 8776655443 1 15678999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchh
Q 013609 158 VKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLP 237 (439)
Q Consensus 158 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (439)
.+..|||..+++..+..++..+.. ++.|++++++ + ++.++++.++ +
T Consensus 172 ~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~---------------------------~~~~~~~~~~--~ 217 (399)
T PRK05122 172 YHWGGLAGLGLLIMLLALLGLLLA----RPRPAVPPVK-G---------------------------ERLPFRRVLG--R 217 (399)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHH----hcCCCCCCCC-c---------------------------cchhHHHHHH--H
Confidence 999999998887666544332222 1212111000 0 0001222222 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHH
Q 013609 238 VWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTV 317 (439)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 317 (439)
++.......+....+.....+.|.|+++ .|. .+.+.......++.+++.++.+++.||+++|+ ....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~----------~~~~ 284 (399)
T PRK05122 218 VWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLR----------VAIV 284 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHH----------HHHH
Confidence 2222222333445556677788888876 565 34556667778888999999999999999887 6666
Q ss_pred HHHHHHHHHhhhcccCChhHHHHH-HHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcc
Q 013609 318 GFMVASIALMALPIFRSSNGAIFC-SSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
+..+.+++...+...++.+..... .+.+.+.....+.......++.++++|+++.|+.+...++|..++|.+.|.+.|.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 364 (399)
T PRK05122 285 SLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW 364 (399)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666665555544433322 2233333333322223334556678999999999999999999999999999998
Q ss_pred ccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 397 AKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
. +|+..+++.+++.+++.+....+++++
T Consensus 365 ~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 365 F-----------GYPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred c-----------CHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 7 799999998888888877766665443
No 41
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.1e-36 Score=293.59 Aligned_cols=403 Identities=19% Similarity=0.162 Sum_probs=282.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCC--------ccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHH
Q 013609 10 IVILTFISTCVCYIERVGFSIAYTAAADAAGVN--------QSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSF 81 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 81 (439)
....+.++.++..++...+++..|.+.++++.+ ..+.+++.+++.++..++++++|+++||+|||+++..+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~ 108 (481)
T TIGR00879 29 LSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIA 108 (481)
T ss_pred HHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHH
Confidence 333445556677788889999999999888877 789999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCcc--hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhh---hh
Q 013609 82 VLWSSTCFWLKLDPN--NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFL---PS 156 (439)
Q Consensus 82 ~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~ 156 (439)
++..++.+++.+..+ +++.+++.|+++|++.+...+...++++|++|+++|++++++.+.+..+|..+++.++ ..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~ 188 (481)
T TIGR00879 109 LLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVS 188 (481)
T ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999998855432 5668999999999999999999999999999999999999999999999999999998 66
Q ss_pred hhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccC--------ccCcccc-h-hhh-hcccccccccc
Q 013609 157 LVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGE--------SLLPMRD-Q-KVK-VDNGGSAMKAA 225 (439)
Q Consensus 157 l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~-~~~-~~~~~~~~~~~ 225 (439)
..+..+||+.|++.++..++.. ...++.||+|+....+.+.++..+ ...+... + ... ....+.+.+..
T Consensus 189 ~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (481)
T TIGR00879 189 LNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSV 267 (481)
T ss_pred CCCCccHHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 6677899999999665555444 344556777643211111111000 0000000 0 000 00000000000
Q ss_pred CchHHhhhc------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 013609 226 KIPWKRIVV------NLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHL 299 (439)
Q Consensus 226 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 299 (439)
...+++.++ .+.++...+..+...........+.|.++++ .|++..+.+.......++.+++.++.+++.||+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 346 (481)
T TIGR00879 268 QPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF 346 (481)
T ss_pred cccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111223332 2333333444444444445566777777766 799988888888888999999999999999999
Q ss_pred hhccccchhhhhHHHHHHHHHHHHHHHhhhc---c--cCC-----hhHH-HHHHHHHHHhhhcccccccccccccCC-Ch
Q 013609 300 ITKRILSVTRTRKFLNTVGFMVASIALMALP---I--FRS-----SNGA-IFCSSIALGFLALGRAGFAVNHMDIAP-RY 367 (439)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 367 (439)
++|+ ....+.++.+++.+.+. . .+. .... ....+...++.....+.......|..| ++
T Consensus 347 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 416 (481)
T TIGR00879 347 GRRP----------LLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL 416 (481)
T ss_pred cchH----------HHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH
Confidence 9988 66666666665555444 1 111 1222 222222333333333445555566555 78
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 368 AGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 368 ~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
|+++.|+.+...+++++++|.+.+.+.+.. ++...|++.+++++++.+..++..+++
T Consensus 417 ~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-----------~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 417 RPKGISIAVAANWLANFIVGFLFPTMLESI-----------GVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CccceehhHHHHHHHHHHHHheecccC
Confidence 999999999999999999999999999987 788899888888888777776554443
No 42
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=7.2e-36 Score=280.24 Aligned_cols=354 Identities=12% Similarity=0.046 Sum_probs=263.4
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc
Q 013609 13 LTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK 92 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 92 (439)
.+.+..+...++...+.+.+|.+.++++.+.++.++..+++.+++.++++++|+++||+|||+++..+.+++++++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 99 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATL 99 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 34455666777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhH
Q 013609 93 LDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAA 172 (439)
Q Consensus 93 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~ 172 (439)
+++ |++.++++|+++|++.+...+...+++.|++|+++|++.+++......+|..+||.+++.+.++.|||+.|++.++
T Consensus 100 ~a~-~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~ 178 (413)
T PRK15403 100 FTT-SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAV 178 (413)
T ss_pred HcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 997 9999999999999998877778888999999999999999999999999999999999999988899999999998
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHH
Q 013609 173 LGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYAL 252 (439)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (439)
..++..+..++..||++++++++ .+.++..+++++++|||+++...+..++.....
T Consensus 179 ~~~i~~~~~~~~lp~~~~~~~~~------------------------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~ 234 (413)
T PRK15403 179 MGLIAFVGLLLAMPETVKRGAVP------------------------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPM 234 (413)
T ss_pred HHHHHHHHHHHhCCCCccccCCC------------------------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 88776665555566654321100 001122345678899999999888888888888
Q ss_pred HHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc
Q 013609 253 YVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIF 332 (439)
Q Consensus 253 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (439)
+.+..+.|.++++.+|+++.+.++.......+..++..+.+++.+|..+++.. ........++..+...+... ..
T Consensus 235 ~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~---~~~~~~~~ig~~l~~~~~~~--~~ 309 (413)
T PRK15403 235 MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFI---WRAVPIQLVGLALLIVGNLL--WP 309 (413)
T ss_pred HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHH---HHHHHHHHHHHHHHHHHHHH--cc
Confidence 88888899999998899999999988777777778777777765443333300 00001122222222222111 12
Q ss_pred CChhHH-HHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 333 RSSNGA-IFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 333 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
++.... ....+.+.+..... +........-.+..+|++.++.+.....+..+++...+++.+..
T Consensus 310 ~~~~~~~~~~~l~~~G~~~~~-p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~ 374 (413)
T PRK15403 310 HVWLWSVLGTSLYAFGIGLIF-PTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG 374 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHh-HHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 222111 22222233333322 22221121222235799999999999999999999999887764
No 43
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=2.7e-36 Score=286.51 Aligned_cols=400 Identities=13% Similarity=0.127 Sum_probs=290.6
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
.++|.++..+.+.......+...++...|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 45687887777777777777777899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCcchHHHHHH-HHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 85 SSTCFWLKLDPNNVFILVV-ARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
.++++++++++ +++.+++ .|+++|++.+...+...+++.++++ ++|+++.++.+.+..+|..++|++++.+.+.+||
T Consensus 95 ~~~~~~~~~~~-~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw 172 (455)
T TIGR00892 95 SLGMILASFSS-NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGW 172 (455)
T ss_pred HHHHHHHHHhh-hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh
Confidence 99999999996 8888865 5799999999777788888999996 7899999999999999999999999999999999
Q ss_pred chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHH
Q 013609 164 NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVV 243 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
|+.|++.+++.++..+..++..++++.+...+.+.++..+.+ ...+. .+.....++.++..+ .+++++|+++....
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 248 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPD--GSTKK-LSKKSTAEKINRFLD-FSLFTHRGFLVYLS 248 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCC--Ccccc-ccccchhhhhhhhcc-hHHhcCchHHHHHH
Confidence 999999998877655554444443222110010000000000 00000 000000000111112 25789999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVAS 323 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (439)
..++...+......++|.|+++ .|+++.+++.+.++.+++.++++++.+++.||...++ .++.....+.+..+
T Consensus 249 ~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~------~~~~~~~~~~~~~~ 321 (455)
T TIGR00892 249 GNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRP------HVQYLFSFALLFNG 321 (455)
T ss_pred HHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCH------HHHHHHHHHHHHHH
Confidence 8888888888888899999987 7999999999999999999999999999999743221 01123333334334
Q ss_pred HHHhhhcccCChhHHHH-HHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccccc
Q 013609 324 IALMALPIFRSSNGAIF-CSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYS 402 (439)
Q Consensus 324 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 402 (439)
+..+.....++.+.... .++.+.+.............+..++++++++.|+.+...++|++++|.+.|.+.|..
T Consensus 322 l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~----- 396 (455)
T TIGR00892 322 LTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT----- 396 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhc-----
Confidence 44434444444433332 233333332333333334444566789999999999999999999999999999987
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHH
Q 013609 403 DLSSPESWRAVFFIPGLLCILSSFV 427 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
++|+..|++.+++.+++.+.
T Consensus 397 -----g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 397 -----KNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred -----CCcchHHHHhhHHHHHHHHH
Confidence 46888888887777666553
No 44
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=1.5e-35 Score=279.43 Aligned_cols=376 Identities=13% Similarity=0.069 Sum_probs=279.4
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
+.....+..+.+..+...+++...++..|.+++++|+|+.+.|+..+.+.+++.+++++.|+++||+|||+++..+..++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34555667778888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh---cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc-c
Q 013609 85 SSTCFWL---KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK-Y 160 (439)
Q Consensus 85 ~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~ 160 (439)
+++++++ .+++ +++.++++|+++|+|.+...+..++++.|+.|+++|.+.+++.+....+|..+++.+++.+.. .
T Consensus 102 ~~~~~l~~~~~~a~-~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~ 180 (438)
T PRK10133 102 ALGAALFWPAAEIM-NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSN 180 (438)
T ss_pred HHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999875 5676 999999999999999999999999999998877777778999999999999999998875431 0
Q ss_pred -------------------------cCCchhHHHHhHHHH-HHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhh
Q 013609 161 -------------------------NGPNSVFNAEAALGG-MWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVK 214 (439)
Q Consensus 161 -------------------------~~wr~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (439)
.+||++|+....+.. +..+......||.+++++. +
T Consensus 181 ~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~--~----------------- 241 (438)
T PRK10133 181 VPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS--D----------------- 241 (438)
T ss_pred CcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--c-----------------
Confidence 256666654443333 3222222222332111000 0
Q ss_pred hccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhCCcccccchhhhhhHHHHHHHHHHHH
Q 013609 215 VDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYF-ELGLQLSLQEMGSSKMMPYLNMFIFSNIGG 293 (439)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 293 (439)
++.++...+.++++|+|.++...+..++..........|.+.|+ ++.+|+++.+++.......++.++++.+.+
T Consensus 242 -----~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g 316 (438)
T PRK10133 242 -----AKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGT 316 (438)
T ss_pred -----ccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111223456888999988877777777788887888999885 567899999999999999999999999999
Q ss_pred HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHH
Q 013609 294 VVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMG 373 (439)
Q Consensus 294 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 373 (439)
++.||+++|+ .+..+..+....++.....++........+.+++..... |.......+..|++.+++.+
T Consensus 317 ~l~~r~g~~~----------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~-P~~~s~a~~~~~~~~~~as~ 385 (438)
T PRK10133 317 WLISRFAPHK----------VLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQY-PTIFSLGIKNLGQDTKYGSS 385 (438)
T ss_pred HHHHHcCHHH----------HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH-HHHHHHHHcccchhhccchh
Confidence 9999999998 666666555555544444433322233334444444444 44444444545666778888
Q ss_pred HHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHH
Q 013609 374 ISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFV 427 (439)
Q Consensus 374 ~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
+.. +...|+.++|++.|.+.|.. ++.+..|++.....+.....
T Consensus 386 l~~-~~~~g~~~~~~i~G~l~~~~----------g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 386 FIV-MTIIGGGIVTPVMGFVSDAA----------GNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHh-HHhccchHHHHHHHHHHHhc----------cchHHHHHHHHHHHHHHHHH
Confidence 876 45678999999999999987 22677777655554444333
No 45
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=4.8e-36 Score=278.67 Aligned_cols=353 Identities=14% Similarity=0.094 Sum_probs=276.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcC
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKL 93 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 93 (439)
+..+.++..+......+.+|.+.+|++.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++..++..+.++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 45667778888888999999999999999999999999999999999999999999999999999999988888877766
Q ss_pred Cc----chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHH
Q 013609 94 DP----NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNA 169 (439)
Q Consensus 94 ~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~ 169 (439)
++ .+++.+++.|+++|++.+...+...+++.|++|+++|++.+++.+....+|..++|.+++.+.+..+||+.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 163 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWV 163 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 52 17999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHH
Q 013609 170 EAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFH 249 (439)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (439)
.++..++..+..+...++++++++++ +.++ +..++..+.+++++|+|.++......+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (365)
T TIGR00900 164 DAVGFAISALLIVSVRIPELAASEIQ-ALSN-------------------AVLRDTREGIKFVLKNPLLRTLLLLALLFN 223 (365)
T ss_pred HHHHHHHHHHHHHhcccccCCCcccc-ccch-------------------hHHHHHHhHHHHHHcCcHHHHHHHHHHHHH
Confidence 87766655444443322221111000 0000 001122334667889999988888777777
Q ss_pred HHHHHHH-HHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhh
Q 013609 250 YALYVLM-NWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMA 328 (439)
Q Consensus 250 ~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (439)
....... .+.|.+.++.+|.++.+.+.......++.+++.++.+++.||.++++ ....+..+.++....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~~~ 293 (365)
T TIGR00900 224 LVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMA----------LMTGAIFVIGLAILV 293 (365)
T ss_pred HHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhH----------HHHHHHHHHHHHHHH
Confidence 7777666 88899998878999999999999999999999999999999998887 666666666666666
Q ss_pred hcccCC-hhHHHHH-HHHHHHhhhcccccccc-cccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 329 LPIFRS-SNGAIFC-SSIALGFLALGRAGFAV-NHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 329 ~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
....++ .+..... ++.+.+.... .+.... ..+..++|+|+++.|+.+...+++..++|.+.|.+.|..
T Consensus 294 ~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 294 VGLTPPNFPLFLVLWFAIGVGYGPI-NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHhhchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 555543 3322222 2223333233 333333 444456689999999999999999999999999999865
No 46
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-37 Score=272.85 Aligned_cols=381 Identities=13% Similarity=0.170 Sum_probs=297.6
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL 83 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 83 (439)
.+..++.+.++++.+.++..|++.+..+.+.+++.+|+++++.|++.+.+.+.+.+++|++|+++|||.||+++..|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 34567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC-
Q 013609 84 WSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG- 162 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~- 162 (439)
+.++.++++++. .||+++++|.+.|+|.+...|+++++++|.+|.++|++++++++.+..+|..+|.+.+..+.+..+
T Consensus 108 W~~Av~~~~fs~-~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 108 WTLAVFASGFSN-HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 999999999995 999999999999999999999999999999999999999999999999999999999999988665
Q ss_pred CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHH
Q 013609 163 PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIV 242 (439)
Q Consensus 163 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (439)
|||.|+..+++++++.++.+++.+|+++...++.+.+... .....+..++.+.+.|+|.+....
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~----------------~~~~ts~~kDl~~l~~~~v~v~~s 250 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM----------------VKPFTSVWKDLKVLAKIKVFVLSS 250 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC----------------CCCccchHHHHHHHHccCceeeeh
Confidence 9999999999999999999989888776533322221110 012233445566777778887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---hhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccc-chhhhhHHHHHHH
Q 013609 243 VNNFTFHYALYVLMNWLPTYFEL---GLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRIL-SVTRTRKFLNTVG 318 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~~ 318 (439)
+......+....+..|.|.+... ..|++.++..++..+...++.+|.+++|.++||+.++.+. .+..........+
T Consensus 251 l~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g 330 (493)
T KOG1330|consen 251 LGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALG 330 (493)
T ss_pred HHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhh
Confidence 77777777777777777776644 3456667777778888999999999999999998775422 2222233344445
Q ss_pred HHHHHHHHhhhcccCChhH--HHHHHHHHHHhhhcccccc-cccccccCCChhhHHHHHHHHHhhhhHH-HHHHHHHHhh
Q 013609 319 FMVASIALMALPIFRSSNG--AIFCSSIALGFLALGRAGF-AVNHMDIAPRYAGIVMGISNTAGTLAGI-VGVDMTGKLL 394 (439)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~-i~~~~~g~l~ 394 (439)
..+++..+.+.+..+.... .+++++++........... ......++|++|.++.++...+..+.+- -+|++.|.+.
T Consensus 331 ~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGils 410 (493)
T KOG1330|consen 331 APLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILS 410 (493)
T ss_pred hhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHH
Confidence 5555555555554443332 3333333333333443333 3444556789999999999888887664 4555999999
Q ss_pred ccccccc
Q 013609 395 EAAKTTY 401 (439)
Q Consensus 395 ~~~~~~~ 401 (439)
|+....+
T Consensus 411 d~l~g~~ 417 (493)
T KOG1330|consen 411 DKLRGYK 417 (493)
T ss_pred HHhhCCC
Confidence 9874433
No 47
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.4e-36 Score=280.85 Aligned_cols=348 Identities=24% Similarity=0.423 Sum_probs=265.4
Q ss_pred HHHHHHHHHHhhhhhHHHHH-HHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc
Q 013609 14 TFISTCVCYIERVGFSIAYT-AAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK 92 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 92 (439)
++++.++..++.....+..| .+.+++|.|+.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++..+..
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh
Confidence 35677888889999999999 89999999999999999999999999999999999999999999999999999977666
Q ss_pred CCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhH
Q 013609 93 LDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAA 172 (439)
Q Consensus 93 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~ 172 (439)
+++ |++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+...++|..++|.+++.+.+..+||+.|++.++
T Consensus 81 ~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 81 FAS-NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp HHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred hhh-hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 655 7779999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCc-hHHhhhcchhHHHHHHHHHHHHHH
Q 013609 173 LGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKI-PWKRIVVNLPVWAIVVNNFTFHYA 251 (439)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 251 (439)
+.++..++...+.++++++++.+.+.++. ++.+++.. .++.+.++|.+|......++....
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE------------------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFV 221 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT--------------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc------------------cccccccccccccccccchhhhhhhhhhHHHHH
Confidence 98887765444555544443222111110 00122222 367788888887566666666677
Q ss_pred HHHHHHHHHHHHHHhhCCc-ccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhc
Q 013609 252 LYVLMNWLPTYFELGLQLS-LQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALP 330 (439)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (439)
......+.|.|+++.+|.+ ..+.+.......+...++.++.+++.||+++++ +.........+....+....
T Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 294 (352)
T PF07690_consen 222 FSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR-------RLLIAILLLILGALGLLLLP 294 (352)
T ss_dssp HHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH-------HHHHHHHHHHHHHHHHCCSH
T ss_pred HHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 8889999999988889999 788998899999999999999999999998876 11222333333333333333
Q ss_pred ccCChhHHH-HHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHH
Q 013609 331 IFRSSNGAI-FCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGV 387 (439)
Q Consensus 331 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~ 387 (439)
..++..... ...+.+.+.....+.......+..++|++|++.|+.+...++++.++|
T Consensus 295 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 295 FSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 332223333 333344433333333334444455669999999999999999999987
No 48
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=4.8e-35 Score=274.22 Aligned_cols=369 Identities=14% Similarity=0.100 Sum_probs=266.4
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
+....+..+.++.++.........|.+|. +.+|+|.|+.+.|++.+++.+++.++++++|+++||+||||++..+.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLAC 91 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHH
Confidence 33445556667778888888888888886 67899999999999999999999999999999999999999999988877
Q ss_pred HHHHhh---hcC-----CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhh
Q 013609 85 SSTCFW---LKL-----DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPS 156 (439)
Q Consensus 85 ~~~~~~---~~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 156 (439)
.++.+. .+. .+ +++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+...|..++|++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~ 170 (392)
T PRK12382 92 GLAGLAYLLAAILPVSAPF-KFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLL 170 (392)
T ss_pred HHHHHHHHhhhccccchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 665543 222 23 789999999999999998889999999999999999999999999999999999999999
Q ss_pred hhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcch
Q 013609 157 LVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNL 236 (439)
Q Consensus 157 l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (439)
+.+..|||+.+.+..+..++... ..++.|+.+.++ + +++ +.++..|
T Consensus 171 l~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~-----------------------~~~----~~~~~~~-- 216 (392)
T PRK12382 171 LHSHFGFAALALTTMVLPLLAWA----FNGTVRKVPAHA-G-----------------------ERP----SLWSVVG-- 216 (392)
T ss_pred HHhccChHHHHHHHHHHHHHHHH----HHHhccCCCCCc-c-----------------------cCc----hHHHHHH--
Confidence 99989999877765444333222 112222111000 0 000 1111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 237 PVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
.++...+..++..........+.|.|+++ .|.+. .+.......++.+++++..|++.||.++|+ ...
T Consensus 217 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~----------~~~ 283 (392)
T PRK12382 217 LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVK----------VAI 283 (392)
T ss_pred HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCe----------ehH
Confidence 11111122233344555667788888877 56543 455566677778889999999999999988 666
Q ss_pred HHHHHHHHHHhhhcccCChhHHHHHHH-HHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 317 VGFMVASIALMALPIFRSSNGAIFCSS-IALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
.+..+.+++...+...++......... .+.+.....+.......++.++++|+++.|+.+...++|..++|.+.|.+.|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~ 363 (392)
T PRK12382 284 VSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT 363 (392)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666665555554443333222 2222222222222334455667899999999999999999999999999999
Q ss_pred cccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 396 AAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
.. +|+..|.+.+++.+++.+..+...|
T Consensus 364 ~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (392)
T PRK12382 364 SF-----------GYPSVFLAGAISAVLGIIVTILSFR 390 (392)
T ss_pred Hh-----------CchHHHHHHHHHHHHHHHHHHhhcc
Confidence 88 8999999999888888777765544
No 49
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=5e-35 Score=274.27 Aligned_cols=357 Identities=11% Similarity=0.097 Sum_probs=271.4
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL 83 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 83 (439)
+++.++.+....+...+..+......+.+|.+.+++|.|+.+.+++.+.+.+++.++++++|+++||+|||+++..+..+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~ 82 (394)
T PRK11652 3 RQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSI 82 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHH
Confidence 34455666666666667778888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 84 WSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
..++...+.+++ +++.+++.|+++|++.+...+....+..|.+++++|+++.+..+.+..++..++|.+++.+.+..||
T Consensus 83 ~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 161 (394)
T PRK11652 83 FILGTLVALFAH-SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW 161 (394)
T ss_pred HHHHHHHHHHHc-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 999999999986 9999999999999999888888889999999999999999999999999999999999999988999
Q ss_pred chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHH
Q 013609 164 NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVV 243 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
|+.|++.++..++..+...+..||+++++++ +++...++++.+|+|+++...+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~ 214 (394)
T PRK11652 162 RACYLFLLLLGAGVTFSMARWMPETRPADAR---------------------------RTRVLASYRTLLSNRRFNCYLL 214 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccCccccc---------------------------hhHHHHHHHHHHcChHHHHHHH
Confidence 9999998887776655555566665432211 0112345677888998887666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVAS 323 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (439)
..+........+..+.+.++++.+|.++.+.++......++.+++..+.+++.||.+++. .....+.....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---------~~~~~~~~~~~ 285 (394)
T PRK11652 215 MLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM---------WQSVICCLLAG 285 (394)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHH
Confidence 666666666666777888998888999999888887777888888888888888887333 12222222222
Q ss_pred HHHhhhccc--CChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 324 IALMALPIF--RSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 324 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
+........ .+.+.......+.....+...+.......+..|++++++.++.+....+|+.+++.+.+.+.+..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 286 LLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 222222211 12222222222222222333444455555666788999999999999999999999998876543
No 50
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.3e-35 Score=279.21 Aligned_cols=377 Identities=20% Similarity=0.228 Sum_probs=273.7
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL 83 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 83 (439)
+++++..+....+..+...++....++..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34456667777778888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 84 WSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
..++.++..+++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+|
T Consensus 92 ~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 92 FSVFTLLCALAT-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHHcc-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 999999999997 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCccccc--Cc-cCcccchhhhhcccccc-ccccCchHHhhhcc---h
Q 013609 164 NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFG--ES-LLPMRDQKVKVDNGGSA-MKAAKIPWKRIVVN---L 236 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~ 236 (439)
|+.|++.++...+..++.....||+++...++.+++... ++ ..+..++......++++ .++.+...+.++++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 999999877777666666667777665332221110000 00 00000000000000000 11111122223332 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 237 PVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
..+...+..++..........+.|.+.+ ..|.++.+.+.......++.+++.++.+++.||+++|+ ...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~ 319 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMV-ELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV----------TAL 319 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH----------HHH
Confidence 3444555556666677777888895554 48999999999999999999999999999999998875 443
Q ss_pred HHHHHHHHHHhhhcccCChhHHHHH-HHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHh
Q 013609 317 VGFMVASIALMALPIFRSSNGAIFC-SSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKL 393 (439)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 393 (439)
.................+....... ++.+.+.... .+.......+ .++++|+++.|+.+.+.++|..++|.+.|.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 320 LLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGG-QSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3333333333332223333333332 3333333333 3334444445 4558999999999999999999999999875
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=6.1e-35 Score=275.38 Aligned_cols=377 Identities=15% Similarity=0.119 Sum_probs=281.9
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccc-----hhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 10 IVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSS-----KGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
....++++.++.........+.+|.+.+|+|.+..+ .|++.+++.++..++.++.|+++||+|||+++..+.+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 94 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHH
Confidence 455667788888888889999999999999998765 488999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCc
Q 013609 85 SSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPN 164 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr 164 (439)
+++..++++.+ +++.+++.|++.|++.+ ..+....++.|++|+++|++++++......+|..++|.+++.+.+..+||
T Consensus 95 ~~~~~~~~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 172 (408)
T PRK09874 95 GIVMVLMGLAQ-NIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLR 172 (408)
T ss_pred HHHHHHHHHHh-hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 99999888886 99999999999999865 56888889999999999999999999999999999999999999989999
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHH-HH
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAI-VV 243 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 243 (439)
+.|++.+++.++..+..++..||++++.+++. ..+ ..+..+.+++|+++.. ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~-~~~~~~~~~~~~~~~~~~~ 226 (408)
T PRK09874 173 PVFFITASVLFLCFLVTLFCIRENFQPVSKKE-------------------------MLH-MREVVTSLKNPKLVLSLFV 226 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcccccchh-------------------------hhH-HHHHHHhCcCCchHHHHHH
Confidence 99999988877766666666666543221100 000 1112345667766543 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccc---ccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGLQLSLQ---EMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFM 320 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 320 (439)
..+...........+.|.|.++..+.... ..+.+.....++.+++.+..|++.||+++|+ ....+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~----------~~~~~~~ 296 (408)
T PRK09874 227 TTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK----------ILITALI 296 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch----------hHHHHHH
Confidence 33444445555667788888774332221 2344555667788888899999999999988 6666666
Q ss_pred HHHHHHhhhcccCChhHHHHHH-HHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccc
Q 013609 321 VASIALMALPIFRSSNGAIFCS-SIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKT 399 (439)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~ 399 (439)
+..+..+.....++.+...... +.+.+.....+..........+++++++.+++.+...++|..++|.+.|.+.+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-- 374 (408)
T PRK09874 297 FSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-- 374 (408)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc--
Confidence 6666555555444444333322 2233332222222223334456688999999999999999999999999999887
Q ss_pred cccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 400 TYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
+|+..|.+.+++.+++.+......+++
T Consensus 375 ---------g~~~~f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 375 ---------GFRAVFLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999988888877766544443
No 52
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=3.7e-35 Score=273.77 Aligned_cols=378 Identities=12% Similarity=0.049 Sum_probs=273.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc
Q 013609 13 LTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK 92 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 92 (439)
.++++.++..++........+.+.+|++.++.+.+++.+.+.+++.+.++++|+++||+|||+++..+.++.++++++++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 45677778777666667777778899999999999999999999999999999999999999999999999999998887
Q ss_pred CCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhH
Q 013609 93 LDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAA 172 (439)
Q Consensus 93 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~ 172 (439)
++. +. ++.|+++|++.+...|...+++.|++|+|+|++++++.+....+|..+||.+++.+.+. .|+..+.+.+.
T Consensus 87 ~~~-~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 87 FGI-HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred HHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 775 54 78899999999999999999999999999999999999999999999999999999884 47777776665
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHH
Q 013609 173 LGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYAL 252 (439)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (439)
..++. .+..+..||++++++++.+ ++ . ...++..+.++.++++|.+........+.....
T Consensus 162 ~~~~~-~~~~~~l~~~~~~~~~~~~-~~--------~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 221 (393)
T PRK11195 162 IYLLA-ALFNLFIPRLGARRPGQSW-NP--------I----------ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAG 221 (393)
T ss_pred HHHHH-HHHHhcCCCCcccccccCC-CH--------H----------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence 54433 3333456665433211100 00 0 000111223457788888776655555555556
Q ss_pred HHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc
Q 013609 253 YVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIF 332 (439)
Q Consensus 253 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (439)
.......|.|+++.+|.++.+.|.+.....++.+++++..+++.||.++++ ....+.. .+.....+...
T Consensus 222 ~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~----------~~~~g~~-~~~~~~~~~~~ 290 (393)
T PRK11195 222 ATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR----------VLPAGIL-MGLVVLLMALQ 290 (393)
T ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc----------hHHHHHH-HHHHHHHHHHH
Confidence 666777888898889999999999999999999999999999999877766 5555543 33333333333
Q ss_pred CChhHHHHHH-HHHHHhhhcccccccccccccCCC-h-hhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCccc
Q 013609 333 RSSNGAIFCS-SIALGFLALGRAGFAVNHMDIAPR-Y-AGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPES 409 (439)
Q Consensus 333 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~ 409 (439)
++.+...... +.+.+......+ .....++.+|+ . +|++.++.+..++++..++..+.+.+ +.. +
T Consensus 291 ~~~~~~~~~~~~~G~~~g~~~~~-~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~-----------~ 357 (393)
T PRK11195 291 HSLLPAYPLLILIGALGGFFVVP-MNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKL-----------G 357 (393)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhh-HHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHc-----------C
Confidence 3333222222 333333333333 33344556664 3 69999999999999999999999865 454 6
Q ss_pred chhHHHHHHHHHHHHHHHHHHhc---cCCccCC
Q 013609 410 WRAVFFIPGLLCILSSFVFLLFS---TGERIFD 439 (439)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 439 (439)
.+..+.+.+...+++..+.+..+ +++|++|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK11195 358 VPVVAVIVGFGLLVALAMALLWRWHRRNQRQFD 390 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 77777776666555555544433 3455554
No 53
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=2.9e-34 Score=269.78 Aligned_cols=345 Identities=14% Similarity=0.096 Sum_probs=261.4
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCC
Q 013609 15 FISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLD 94 (439)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 94 (439)
.+...+..+....+.|..|.+.+++|.++++.++..+++.+++.++++++|+++||+|||+++..+..+..++..+++++
T Consensus 12 ~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 12 AGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh
Confidence 33355566677888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHH
Q 013609 95 PNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALG 174 (439)
Q Consensus 95 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~ 174 (439)
+ +++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+..+||+.|++.+++.
T Consensus 92 ~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~ 170 (401)
T PRK11043 92 E-SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAIT 170 (401)
T ss_pred c-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Confidence 7 999999999999999888888888999999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHH
Q 013609 175 GMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYV 254 (439)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (439)
++..+..++.. |+++++++ ++.+.++++++|+|+++...+...+....+..
T Consensus 171 ~~~~~~~~~~~-~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (401)
T PRK11043 171 LLLILPTLRLK-PSKKARKQ----------------------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFA 221 (401)
T ss_pred HHHHHHHHHcC-CCCCcccc----------------------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHH
Confidence 77665554443 33221100 11123567888899888766666666666677
Q ss_pred HHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc--c
Q 013609 255 LMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI--F 332 (439)
Q Consensus 255 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 332 (439)
+..+.|.++++ .|+++.+.+.......++.+++....+++.||+++|+ ..........+.......... .
T Consensus 222 ~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 293 (401)
T PRK11043 222 WLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQ-------LLPWLLVLFAVSVIAIWLASLLSH 293 (401)
T ss_pred HHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-------HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 78889998876 7999999998877778888899999999999998877 011112222222222222222 2
Q ss_pred CChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 333 RSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
++.........+.....+...+.......+..|++++++.|+.+.....++..++.+.|.+.|..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 294 PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTP 358 (401)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 22222222222222222233333333334445788999999999999999999999999998754
No 54
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.6e-35 Score=278.13 Aligned_cols=373 Identities=12% Similarity=0.067 Sum_probs=276.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc
Q 013609 13 LTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK 92 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 92 (439)
.+....++..+......+..|.+.++++.++.+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++....+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~ 100 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLA 100 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHH
Confidence 34445666777778888999999999999999999999999999999999999999999999999988877776665443
Q ss_pred -----CCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhH
Q 013609 93 -----LDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVF 167 (439)
Q Consensus 93 -----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f 167 (439)
..+ +++.+++.|+++|++.+...+...+++.|+.|+++|+++.++.....++|..+||.+++.+.+..+||+.|
T Consensus 101 ~~~~~~~~-~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~ 179 (417)
T PRK10489 101 LNAFLPEP-SLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNY 179 (417)
T ss_pred HHHHcCCC-cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHH
Confidence 244 78999999999999988888999999999999999999999999999999999999999999888999999
Q ss_pred HHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHH
Q 013609 168 NAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFT 247 (439)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (439)
++.++..++..+... ..|+++++++++. +..++..+.++.++++|.++...+..++
T Consensus 180 ~~~~~~~~~~~~~~~-~l~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (417)
T PRK10489 180 GLAAAGTFITLLPLL-RLPALPPPPQPRE-----------------------HPLRSLLAGFRFLLASPVVGGIALLGGL 235 (417)
T ss_pred HHHHHHHHHHHHHHH-hCCCCCCCCcccc-----------------------cchHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 988777665544443 4454432211000 0011122345667788887666555444
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHh
Q 013609 248 FHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALM 327 (439)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (439)
... ......++|.|+++.+|.++.+.+.+.+...++.+++.++.+++.||.++++ .+..+..+.+++..
T Consensus 236 ~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~----------~l~~~~~~~~~~~~ 304 (417)
T PRK10489 236 LTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGL----------LMLLSTLGSFLAVG 304 (417)
T ss_pred HHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcch----------HHHHHHHHHHHHHH
Confidence 333 4567788999999888999999999999999999999999999999865555 55566666666665
Q ss_pred hhcccCChhHHHHHHHHHHHhhhccccccccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCC
Q 013609 328 ALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSS 406 (439)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~ 406 (439)
.+...++........++.....+...+.......+. |++.||+++|+.+...++|..++|.+.|.+.|..
T Consensus 305 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~--------- 375 (417)
T PRK10489 305 LFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM--------- 375 (417)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh---------
Confidence 555554443322222222222222223334444554 4578999999999999999999999999999987
Q ss_pred cccchhHHHHHHHHHHHH-HHHHHHhc
Q 013609 407 PESWRAVFFIPGLLCILS-SFVFLLFS 432 (439)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~-~~~~~~~~ 432 (439)
++...+...+++.++. .+.....+
T Consensus 376 --g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 376 --TPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred --chhhHHHHHHHHHHHHHHHHHHhcc
Confidence 6777777666555444 44434333
No 55
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5.4e-35 Score=282.59 Aligned_cols=387 Identities=13% Similarity=0.122 Sum_probs=271.8
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
+++|..+..++++.+++.++....++..|.+.+++|.|+.+.+++.+.+.+++.++.++.|+++||+|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCc
Q 013609 85 SSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPN 164 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr 164 (439)
+++.+++++++ |++.+++.|++.|++.+...+....++.|++|+|+|++++++...+..+|..+++.+.+.+.+..+||
T Consensus 96 ~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 174 (496)
T PRK03893 96 SVGTLACGFAP-GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 99999999997 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCc------hHHhh------
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKI------PWKRI------ 232 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~------ 232 (439)
+.|++..+..++ .+......||++++++++.+.++. .+..+. ....+.+...... .....
T Consensus 175 ~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (496)
T PRK03893 175 ALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPV----RTMVDI---LYRGEHRIINILLTLAAAAALWFCFAGNLQ 246 (496)
T ss_pred HHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccc----hhHHHH---HhcchhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999875443332 222233344443321111000000 000000 0000000000000 00000
Q ss_pred -------------------------hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHH
Q 013609 233 -------------------------VVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFI 287 (439)
Q Consensus 233 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 287 (439)
.+.+.........+...........++|.|+++.+|++..+.+.+.+...++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~ 326 (496)
T PRK03893 247 NAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAV 326 (496)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence 0001111111111111111223567899999877999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChh-HHHHHHHHHH-Hhhhcccccccccccc-cC
Q 013609 288 FSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSN-GAIFCSSIAL-GFLALGRAGFAVNHMD-IA 364 (439)
Q Consensus 288 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~ 364 (439)
+.++.|++.||+++|+ ....+..+..+..+......+.. .......+.. +......+.......+ .+
T Consensus 327 g~~~~g~l~dr~g~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (496)
T PRK03893 327 GCCVGGFLGDWLGTRK----------AYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFD 396 (496)
T ss_pred HHHHHHHHHHHhcchH----------HHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCC
Confidence 9999999999999888 55555555444443332222222 2221222211 1121122233334444 45
Q ss_pred CChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHH
Q 013609 365 PRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLC 421 (439)
Q Consensus 365 ~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (439)
+++|++++|+.+...++|+.++|.+.|.+.|.. +++..+...+..+
T Consensus 397 ~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-----------g~~~~~~~~~~~~ 442 (496)
T PRK03893 397 TEQRAAGLGFTYNVGALGGALAPILGALIAQRL-----------DLGTALASLSFSL 442 (496)
T ss_pred HHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-----------ChHHHHHHHHHHH
Confidence 579999999999999999999999999999988 7777775554443
No 56
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=9.3e-35 Score=271.74 Aligned_cols=377 Identities=14% Similarity=0.116 Sum_probs=275.1
Q ss_pred HHHHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhh
Q 013609 13 LTFISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWL 91 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 91 (439)
.+....++.........+.++. +.+++|.|+.++|++.+.+.+...+.+++.|+++||+|||+++..+.++.+++.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3445556666666666666665 678999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHh
Q 013609 92 KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEA 171 (439)
Q Consensus 92 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~ 171 (439)
.+++ +++.+++.|+++|++.+...|...+++.|++|+|+|++++++.....++|..+||.+++.+. .++||+.|++.+
T Consensus 94 ~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~ 171 (400)
T PRK11646 94 AIAH-EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGA 171 (400)
T ss_pred HHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 9986 89999999999999998888999999999999999999999999999999999999999998 689999999988
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHH
Q 013609 172 ALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYA 251 (439)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (439)
...++..++..+..||+++++ . .++..+++++.+++|+++...+..+.....
T Consensus 172 ~~~~~~~i~~~~~~~~~~~~~-~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (400)
T PRK11646 172 VLFVLAAAFNAWLLPAYKLST-V---------------------------RTPVREGMTRVLRDKRFVTYVLTLTGYYML 223 (400)
T ss_pred HHHHHHHHHHHHhCCcccccc-c---------------------------chhhHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 877766555444554421110 0 011123457788899887766655554444
Q ss_pred HHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHH-hhhccccchhhhhHHHHHHHHHHHHHHHhhhc
Q 013609 252 LYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADH-LITKRILSVTRTRKFLNTVGFMVASIALMALP 330 (439)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (439)
......+.|.|+++..+ ++.+.+.+.+...+.........+++.|| .+.++ ....+..+.+++...+.
T Consensus 224 ~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~----------~~~~~~~~~~~~~~~l~ 292 (400)
T PRK11646 224 AVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH----------RLMAGLLIMSLSMFPIG 292 (400)
T ss_pred HHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH----------HHHHHHHHHHHHHHHHH
Confidence 44556788999988544 67778887777776666555555555554 44343 44555666666665555
Q ss_pred ccCChhHHHHH-HHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCccc
Q 013609 331 IFRSSNGAIFC-SSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPES 409 (439)
Q Consensus 331 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~ 409 (439)
..++....... .+.+.+.....+.......+..|+++||+++|+.+...++|..++|.+.|.+.|..+.. +.
T Consensus 293 ~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~-------~~ 365 (400)
T PRK11646 293 MVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKAL-------NQ 365 (400)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhc-------CC
Confidence 55544333222 22233333333333333344456689999999999999999999999999999986210 13
Q ss_pred chhHHHHHHHHHHHHHHHHHHhccCCcc
Q 013609 410 WRAVFFIPGLLCILSSFVFLLFSTGERI 437 (439)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
....+...+.+.+++.+......|++|.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (400)
T PRK11646 366 PELPWMMLGIIGLITLLALYWQFSQKRI 393 (400)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhchH
Confidence 4566767677777666666555555543
No 57
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=7.9e-35 Score=271.59 Aligned_cols=334 Identities=16% Similarity=0.165 Sum_probs=256.2
Q ss_pred HhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHH
Q 013609 23 IERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILV 102 (439)
Q Consensus 23 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (439)
+....+.|.+|.+.+++|.|+++.+++.+++.++..++.+++|+++||+|||+++..+.++.+++...+.+++ +++.++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 83 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ-TIDQLI 83 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc-cHHHHH
Confidence 3456677999999999999999999999999999999999999999999999999999999999999999997 899999
Q ss_pred HHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHh
Q 013609 103 VARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 103 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 182 (439)
+.|+++|++.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+.+..+||+.|++.+.+.++..+...
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999998888877666666
Q ss_pred hhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013609 183 KYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTY 262 (439)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (439)
+..||++++++++ + .+.++..+++++.+++|+++...+..++.......+..+.|.+
T Consensus 164 ~~~~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (377)
T PRK11102 164 FFIPETLPKERRQ-P----------------------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFV 220 (377)
T ss_pred HhCCccCcccccC-C----------------------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 6666654322110 0 0011122345678889988887777777777777777788888
Q ss_pred HHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHH---HHhhhcccC-ChhHH
Q 013609 263 FELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASI---ALMALPIFR-SSNGA 338 (439)
Q Consensus 263 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~ 338 (439)
+.+.+|+++.+.+.......+..+++.++.+++.||+++|+ ....+..+..+ ........+ +.+..
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALN----------MLRFGLWIQFIMGIWLVVSALLDLGFWAL 290 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH----------HHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 88888999999999999999999999999999999999988 55555443222 222222222 22222
Q ss_pred HHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhh-hhHHHHHHHH
Q 013609 339 IFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGT-LAGIVGVDMT 390 (439)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~i~~~~~ 390 (439)
........+..............+..|++++++.++.+.... ++..+++.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 291 VVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222222222233334456677899999999877654 4455555443
No 58
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=5.4e-34 Score=265.58 Aligned_cols=360 Identities=8% Similarity=0.005 Sum_probs=278.6
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHH----HHHHHHHHHHHh
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVL----LFSFVLWSSTCF 89 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~ 89 (439)
+.+.++..+.......|.+|.+.+|+|.|.+++|++.+++.+...++++++|+++||+|||+.. .++..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 5667788888888999999999999999999999999999999999999999999999985433 333322222 2
Q ss_pred hhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHH
Q 013609 90 WLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNA 169 (439)
Q Consensus 90 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~ 169 (439)
.+..++ +++.+++.|.++|.+.+...|...++..|+ +++|++.+|....+.++|.+++|++++.+.+++|||..|++
T Consensus 87 ~~~~~~-~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~ 163 (382)
T TIGR00902 87 FSAGAH-NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAI 163 (382)
T ss_pred HHHhhh-hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHH
Confidence 444665 899999999999999988899999988765 47899999999999999999999999999999999999988
Q ss_pred HhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHH
Q 013609 170 EAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFH 249 (439)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (439)
.+....+ .+......|+.+++++++ + ++++...+.++++|+|+++...+..++..
T Consensus 164 ~~~~~~~-~~~~~~~~~~~~~~~~~~-~-----------------------~~~~~~~~~~~~l~~~~~~~~l~~~~l~~ 218 (382)
T TIGR00902 164 LTAGLAF-MLIGFLIKPTIPPKDAIP-E-----------------------DESQGDSAFIALLKNPMNLRFLAAVCLIQ 218 (382)
T ss_pred HHHHHHH-HHHHHHcCCCCCCCcccc-c-----------------------cccccchhHHHHHcChHHHHHHHHHHHHH
Confidence 7655332 223333333222211100 0 00111234578999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhh
Q 013609 250 YALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMAL 329 (439)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (439)
.+...+..+.|.|+++ .|.++.+.+.+.....+..+++..+.+++.||++.|+ .+..+.+...+....+
T Consensus 219 ~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~----------~l~~~~~~~~~~~~~~ 287 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD----------LLLISAIACVGRWAII 287 (382)
T ss_pred HHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH----------HHHHHHHHHHHHHHHH
Confidence 9999999999999987 8999999999999888999999999999999999998 8888999998888888
Q ss_pred cccCChhHHHHHHHH-HHHhhhcccccccccccccCCChhhHHHHHHHH-HhhhhHHHHHHHHHHhhccccccccCCCCc
Q 013609 330 PIFRSSNGAIFCSSI-ALGFLALGRAGFAVNHMDIAPRYAGIVMGISNT-AGTLAGIVGVDMTGKLLEAAKTTYSDLSSP 407 (439)
Q Consensus 330 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~ 407 (439)
...++.+......++ +..++... +....+..+.+++++++++++++. ...+|..++|.+.|.+.|..
T Consensus 288 ~~~~~~~~~~~~q~l~g~~~~~~~-~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~---------- 356 (382)
T TIGR00902 288 GAIEAFPLIFLLQILHCGTFAVCH-LAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL---------- 356 (382)
T ss_pred HhHhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 777666654444333 33333333 333444445566789999999874 56789999999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHH
Q 013609 408 ESWRAVFFIPGLLCILSSFV 427 (439)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~ 427 (439)
++ ..|...+++.+++.++
T Consensus 357 -g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 357 -GA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred -cH-HHHHHHHHHHHHHHHH
Confidence 54 6677777777766444
No 59
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=4.9e-34 Score=266.91 Aligned_cols=369 Identities=15% Similarity=0.118 Sum_probs=259.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhh-hhhhhcccccccccccCchHHH-HHHHHHHHHHH
Q 013609 12 ILTFISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYY-GYACSQVPGGWAAQKIGGRKVL-LFSFVLWSSTC 88 (439)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~ 88 (439)
....+..++.........|.+|. +.+|+|.|++++|++.+...+ +..+++++.++ +||+||||.+ ..+.+..+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~ 96 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLAC 96 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHH
Confidence 34455577777777777787777 678899999999999876655 55556655555 9999999875 45666666778
Q ss_pred hhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCccc--chhhHHHhhhhhHHHHHHhhhhhhhhcccCCchh
Q 013609 89 FWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHER--SRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSV 166 (439)
Q Consensus 89 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~ 166 (439)
.+.++++ +++.+++.+.+.|...+...|...+++.|+.++++| +...++.+.+.++|.++||++++.+.+++|||..
T Consensus 97 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~ 175 (393)
T PRK15011 97 TLFAWNR-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVM 175 (393)
T ss_pred HHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHH
Confidence 8888886 898877666555544456788889999998876655 3445788899999999999999999998999999
Q ss_pred HHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHH
Q 013609 167 FNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNF 246 (439)
Q Consensus 167 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (439)
|++.++..++..+..++..||.+++++++ + + +.+.. ++ +++..+.......
T Consensus 176 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~--------------------~~~~~----~~--~~~~~~~~~~~~~ 226 (393)
T PRK15011 176 YLSAAVAFIVCGVMVWLFLPSMRKELPLA-T--G--------------------TLEAP----RR--NRRDTLLLFVICT 226 (393)
T ss_pred HHHHHHHHHHHHHHHHhhcCccCCCCccc-c--c--------------------ccccc----cc--ccccHHHHHHHHH
Confidence 99998888777766666677765432110 0 0 00000 00 0112233333334
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHH
Q 013609 247 TFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIAL 326 (439)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (439)
........+..+.|.|+++.+|+++.+.+.+.....+..+++.++.|+++||+++|+ ....+.....+..
T Consensus 227 ~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~----------~~~~~~~~~~~~~ 296 (393)
T PRK15011 227 LMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF----------LMRVAAVAGVCFY 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH----------HHHHHHHHHHHHH
Confidence 444555566778999998889999999988887777888889999999999999988 4444444444333
Q ss_pred hhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCC
Q 013609 327 MALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSS 406 (439)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~ 406 (439)
......++....+....+.....+...+.......|..|+++++++++.+...++|..++|.+.|.+.|..
T Consensus 297 ~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~--------- 367 (393)
T PRK15011 297 AGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW--------- 367 (393)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 33333333333332222222222222222334456777888999999999999999999999999999987
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 407 PESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
+|+..+.+.+++.+++.+..+..+
T Consensus 368 --g~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 368 --NYHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHhhc
Confidence 799999888888888777776654
No 60
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=4.9e-34 Score=267.40 Aligned_cols=342 Identities=14% Similarity=0.106 Sum_probs=258.3
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc
Q 013609 13 LTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK 92 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 92 (439)
......+..........+.+|.+.+|+|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.++..++..++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 34444555666666777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhH
Q 013609 93 LDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAA 172 (439)
Q Consensus 93 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~ 172 (439)
+++ +++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+.+..+||+.|++.++
T Consensus 87 ~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~ 165 (392)
T PRK10473 87 LAE-TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAA 165 (392)
T ss_pred HhC-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHH
Confidence 987 8999999999999999988999999999999999999999999999999999999999998888999999999988
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHH
Q 013609 173 LGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYAL 252 (439)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (439)
..++..++.....||++++++++ +++..+..++.+++|+++...+...+.....
T Consensus 166 ~~~i~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (392)
T PRK10473 166 MGILVLLLSLFILKETRPARAPA--------------------------ASSKPRENSESLLNRFFLSRLVITTLSVTVI 219 (392)
T ss_pred HHHHHHHHHHHHcCCCCCcccCC--------------------------ccchHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 88777666666666654322110 0011122356778888776666555555555
Q ss_pred HHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc
Q 013609 253 YVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIF 332 (439)
Q Consensus 253 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (439)
..+..+.|.++++.+|+++.+.+.......++.+++..+.+++.||+++|+ ....+..+..++...+...
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~----------~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRT----------LMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH----------HHHHHHHHHHHHHHHHHHH
Confidence 566677788888888999999998888999999999999999999999988 6666666666665555544
Q ss_pred CChhHHHH-HHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 333 RSSNGAIF-CSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 333 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
+....... ..+...+....... ....+..| ++|+ |..+....++..+++.+.+++.+..
T Consensus 290 ~~~~~~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 290 PSHAVSLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33332222 22222222221111 12222333 3332 3334445567777777777787776
No 61
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=4.5e-35 Score=283.58 Aligned_cols=373 Identities=14% Similarity=0.085 Sum_probs=269.7
Q ss_pred HHHHHHHHhhCCC---ccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHH
Q 013609 30 IAYTAAADAAGVN---QSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARL 106 (439)
Q Consensus 30 ~~~~~i~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 106 (439)
+..|.+.+|+|++ +.+.++..+++.++..+++++.|+++||+|||+++.++.++.+++.+++++++ |++.+++.|+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~r~ 188 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP-NYTVFLVFRL 188 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc-cHHHHHHHHH
Confidence 5678899999998 89999999999999999999999999999999999999999999999999997 9999999999
Q ss_pred HHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhcc
Q 013609 107 LVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYAT 186 (439)
Q Consensus 107 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 186 (439)
+.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. ++.|
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~ 264 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVP 264 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcC
Confidence 99999999999999999999999999999999999999999999998876643 9999999998877766555 5778
Q ss_pred CCCCCCCCCCCcccccCccCc--------ccchh-hhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 013609 187 DPPRSEHPKASAAGFGESLLP--------MRDQK-VKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMN 257 (439)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (439)
|+|++...+.+.++..+...+ ...+. ....+++.+.++...++++++++|+++...+......+.......
T Consensus 265 esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (505)
T TIGR00898 265 ESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYY 344 (505)
T ss_pred CChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 988865444333322110000 00000 000000001111234678899999888776665554444333333
Q ss_pred HHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCCh--
Q 013609 258 WLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSS-- 335 (439)
Q Consensus 258 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 335 (439)
.++.+..+ .+.+. .......++..+++.++.+++.||++||+ .+..+.++.+++.+.+...++.
T Consensus 345 ~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~----------~~~~~~~~~~~~~l~~~~~~~~~~ 410 (505)
T TIGR00898 345 GLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRY----------TMAASLLLAGVALLLLLFVPVDLY 410 (505)
T ss_pred HHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHH----------HHHHHHHHHHHHHHHHHHcCCCch
Confidence 33333333 44442 23334556778889999999999999998 7777777777776666555433
Q ss_pred hHHHHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHH
Q 013609 336 NGAIFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVF 414 (439)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 414 (439)
.......++..+......+....+..|..| +.|+++.|+.+....+|++++|.+.+ + +.. ++..++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~-----------~~~~~~ 477 (505)
T TIGR00898 411 FLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEK-----------WLFLPL 477 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHH-----------HHhhHH
Confidence 222222333322223333444556666666 78999999999999999999999998 3 333 456677
Q ss_pred HHHHHHHHHHHHHHHHhccC
Q 013609 415 FIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~ 434 (439)
.+.++..+++.+..+++++.
T Consensus 478 ~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 478 VLFGGLALLAGILTLFLPET 497 (505)
T ss_pred HHHHHHHHHHHHHHHcCcCC
Confidence 77777777777766666543
No 62
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=3.7e-34 Score=266.09 Aligned_cols=347 Identities=18% Similarity=0.231 Sum_probs=257.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh
Q 013609 12 ILTFISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW 90 (439)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 90 (439)
...+++.++...+...+.+..|. +.+++|+|+.+.+++.+++.+++.+++++.|+++||+|||+.+.++.++..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 35677778888888999999995 99999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc----------c
Q 013609 91 LKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK----------Y 160 (439)
Q Consensus 91 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~ 160 (439)
+++++++++.+++.|+++|++.+ ..+...++++|++|+|+|++++++.....++|..+++.+++.+.+ +
T Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 84 AGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred HHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 99883279999999999999966 456788999999999999999999998888888888777766554 3
Q ss_pred cCCchhH-HHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHH
Q 013609 161 NGPNSVF-NAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVW 239 (439)
Q Consensus 161 ~~wr~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (439)
.+||+.| +..+++..+..++.+...+|+|++++++.+.+...+ .. ..+++...+.++.+++|+++
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~ 228 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGA-----RW---------SVGTGALGDQLKVFRDRHTW 228 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccc-----cc---------cccchhHHHHHHHHhccchh
Confidence 4899999 444555555555555555665543211110000000 00 00011112456788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHH
Q 013609 240 AIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGF 319 (439)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 319 (439)
...+..++..........+.|.|+++.+|.++.+++.+.....+..++++++.+++.||+++|+ ....+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~----------~~~~~~ 298 (366)
T TIGR00886 229 ILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR----------KLLMSF 298 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch----------hHHHHH
Confidence 8888888877788888999999999989999999998888889999999999999999999987 434433
Q ss_pred HHHHHHHhhhc--ccC--ChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhH
Q 013609 320 MVASIALMALP--IFR--SSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAG 383 (439)
Q Consensus 320 ~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 383 (439)
.....+...+. ..+ +...............+...+.......+..|+++|+++|+.+...++|+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 299 LGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence 33333333222 222 22222222223333334444445566667778999999999999888763
No 63
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=1e-33 Score=264.64 Aligned_cols=369 Identities=12% Similarity=0.102 Sum_probs=276.7
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHh
Q 013609 10 IVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCF 89 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 89 (439)
.+..++...++.++.....++..|.+++++|.|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++..
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 35567777888888889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcC---CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc------
Q 013609 90 WLKL---DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY------ 160 (439)
Q Consensus 90 ~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------ 160 (439)
++.. .+ +++.+++.|++.|+|.+...+..++++.+..|+++|++.+++.+...++|..++|.+++.+...
T Consensus 84 l~~~~~~~~-~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 84 LFWPAAEIM-NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHhhc-cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 8643 34 8999999999999999999999999999999999999999999999999999999998877421
Q ss_pred --------------------cCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccc
Q 013609 161 --------------------NGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGS 220 (439)
Q Consensus 161 --------------------~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (439)
.+||++|++.+++.++..++.. +.+. |+.++++ +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~-p~~~~~~------------------------~ 216 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKM-PALNHSD------------------------A 216 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC-CCCCccc------------------------c
Confidence 3699999999887776544433 2222 2111000 0
Q ss_pred cccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCcccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 013609 221 AMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGL-QLSLQEMGSSKMMPYLNMFIFSNIGGVVADHL 299 (439)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 299 (439)
++.+..++.++++|+|+++...+..++.........++++.|.++.. +.+...++...+.......+|+++++++.||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~ 296 (410)
T TIGR00885 217 KQISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL 296 (410)
T ss_pred ccccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 00111224457889999998888888888888788899999997632 33434445455666678899999999999999
Q ss_pred hhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHh
Q 013609 300 ITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAG 379 (439)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 379 (439)
++|+ .+.++..+..+..++....++..........+++.....+.......+...++.+..+.++....
T Consensus 297 ~~~~----------~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~- 365 (410)
T TIGR00885 297 AAHK----------VLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI- 365 (410)
T ss_pred CHHH----------HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH-
Confidence 9988 77777777777777776665544455555556555555544444555555544444444444443
Q ss_pred hhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHH
Q 013609 380 TLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCI 422 (439)
Q Consensus 380 ~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (439)
+|+++.|++.|.+.|..+... .++++.+|++...+.+
T Consensus 366 -~Gga~~p~l~G~~~d~~~~~~-----~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 366 -IGGGIVPPLQGFIIDMKEIAA-----APAVNTSFILPLLCFA 402 (410)
T ss_pred -hccchHHHHHHHHHHHhcccc-----cCccchHHHHHHHHHH
Confidence 999999999999999541100 0247777776444433
No 64
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=5e-33 Score=256.98 Aligned_cols=347 Identities=28% Similarity=0.464 Sum_probs=296.3
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc
Q 013609 13 LTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK 92 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 92 (439)
.+.+..+....+.....+..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+..+..++.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 45567788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhH
Q 013609 93 LDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAA 172 (439)
Q Consensus 93 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~ 172 (439)
+.+ +++.+++.|++.|++.+...+...+++.|++|+|+|++.+++.+....+|..+++.+++.+.+..+||+.+++.++
T Consensus 83 ~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 83 FAS-SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred Hhc-cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 986 9999999999999999999999999999999999999999999999999999999999999998899999999888
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHH
Q 013609 173 LGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYAL 252 (439)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (439)
..++..+...+.. |+++...+..++.....
T Consensus 162 ~~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~~~~~~ 191 (352)
T cd06174 162 LGLLLALLLLFLL--------------------------------------------------RLLLLLALAFFLLSFGY 191 (352)
T ss_pred HHHHHHHHHHHHH--------------------------------------------------HHHHHHHHHHHHHHhHH
Confidence 8777655544331 56777788888888899
Q ss_pred HHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc
Q 013609 253 YVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIF 332 (439)
Q Consensus 253 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (439)
.....+.|.+.++..|.++.+.+.......++..++.++.+++.||.++|+ ..+..+..+..++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~i~~~~~~~~ 262 (352)
T cd06174 192 YGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR---------LLLLIGLLLAALGLLLLALA 262 (352)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------HHHHHHHHHHHHHHHHHHHh
Confidence 999999999999977999999999999999999999999999999998876 14555666666666666666
Q ss_pred CChhHHHHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccch
Q 013609 333 RSSNGAIFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWR 411 (439)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 411 (439)
++.+.......+.....+...+.......+..| ++|++..|+.+...+++..++|.+.|.+.|.. +++
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-----------~~~ 331 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-----------GYG 331 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------Ccc
Confidence 554444444333333334444555555555544 89999999999999999999999999999876 899
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 013609 412 AVFFIPGLLCILSSFVFLL 430 (439)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~ 430 (439)
..+.+.+++.+++.+....
T Consensus 332 ~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 332 GVFLILAALALLAALLLLL 350 (352)
T ss_pred hHHHHHHHHHHHHHHHhee
Confidence 9999999988888776544
No 65
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=1.9e-33 Score=262.46 Aligned_cols=366 Identities=12% Similarity=0.067 Sum_probs=272.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh
Q 013609 12 ILTFISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW 90 (439)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 90 (439)
..+.+..++.........+.+|. +.+++|+|+.++|++.+.+.+++.+.+++.|+++||+|||+++.++.++..++.++
T Consensus 10 ~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~ 89 (395)
T PRK10054 10 SALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA 89 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH
Confidence 34445667777777777777765 56789999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHH
Q 013609 91 LKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAE 170 (439)
Q Consensus 91 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~ 170 (439)
.++++ +++.+++.|.+.|.+.+...+...++..|..|+++|++++++.....++|..++|.+++.+.+ .+||.+|++.
T Consensus 90 ~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~ 167 (395)
T PRK10054 90 IPLVN-NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLA 167 (395)
T ss_pred HHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHH
Confidence 99986 899999999999988887888899999999999999999999999999999999999998875 7999999988
Q ss_pred hHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHH
Q 013609 171 AALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHY 250 (439)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (439)
++..++..++..+..||++++++++ + ++ ..+.++.+|||+++...+..++...
T Consensus 168 ~~~~~i~~i~~~~~~~~~~~~~~~~------------------------~--~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 220 (395)
T PRK10054 168 AICSAFPLVFIQIWVQRSEKAIATE------------------------T--GS-VWSPSVLLQDKALLWFTCSGFLASF 220 (395)
T ss_pred HHHHHHHHHHHHHHHhccccccccc------------------------h--hh-hhhhhhhccCceehHHHHHHHHHHH
Confidence 8777766555554454433221100 0 00 0112567889999888887777777
Q ss_pred HHHHHHHHHHHHHHHh--hCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhh
Q 013609 251 ALYVLMNWLPTYFELG--LQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMA 328 (439)
Q Consensus 251 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (439)
.......+.+.|..+. .+.+....+.......+.....+...+++.||.++|+ ....+..+..++...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~l~~~~~~~~~~~~~ 290 (395)
T PRK10054 221 VSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP----------LMTAGTLCFVIGLVG 290 (395)
T ss_pred HHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchh----------HHHHHHHHHHHHHHH
Confidence 7666667777777543 3455556677777776767777788889999988887 666676666666655
Q ss_pred hcccC-ChhHHH-HHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCC
Q 013609 329 LPIFR-SSNGAI-FCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLS 405 (439)
Q Consensus 329 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~ 405 (439)
+.... +.+... .....+.+. ....+.......+ .+++.++++.+..+ ...+|..+||.+.|.+.|+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~g~-~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~-------- 360 (395)
T PRK10054 291 FIFSGNSLLLWGMSAAVFTVGE-IIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL-------- 360 (395)
T ss_pred HHHcchHHHHHHHHHHHHHHHH-HHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc--------
Confidence 54432 332222 222223332 2222333334434 45578899988655 67789999999999999998
Q ss_pred CcccchhHHHHHHHHHHHHHHHHH
Q 013609 406 SPESWRAVFFIPGLLCILSSFVFL 429 (439)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~ 429 (439)
++...+++.+.+..++.++..
T Consensus 361 ---g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 361 ---PPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred ---ChhhHHHHHHHHHHHHHHHHH
Confidence 788888777666666555554
No 66
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=1.1e-33 Score=261.29 Aligned_cols=331 Identities=15% Similarity=0.124 Sum_probs=252.6
Q ss_pred hhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHH
Q 013609 25 RVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVA 104 (439)
Q Consensus 25 ~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (439)
....++.+|.+.+|+|.|+++.+++.+++.+++.+++++.|+++||+|||+++.++.++..++.+.+ .++ +++.+++.
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~-~~~~l~~~ 93 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP-GTALLFAG 93 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc-cHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999888888877 666 89999999
Q ss_pred HHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc--CCchhHHHHhHHHHHHHHHHh
Q 013609 105 RLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN--GPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 105 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--~wr~~f~~~~~~~~~~~~~~~ 182 (439)
|++.|++.+...+.....+.|++| ++|++++++.+.+..+|..+++.+++.+.++. +||+.|...+.+.++....
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~-- 170 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA-- 170 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH--
Confidence 999999999888888889999986 68999999999999999999999998887754 3999988776654433222
Q ss_pred hhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013609 183 KYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTY 262 (439)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (439)
..|+.+++++++ ++....+.++++|+|.++...+..++....++....++|.|
T Consensus 171 -~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 223 (355)
T TIGR00896 171 -WIPQVRRRVAAN--------------------------QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAI 223 (355)
T ss_pred -HhhhhccccCCC--------------------------CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223332211100 00011223567888998887777777777888888999999
Q ss_pred HHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHH
Q 013609 263 FELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCS 342 (439)
Q Consensus 263 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (439)
+++ .|.+..+.+...+...++.++++++.|++.||+++|+ .....+..+.+++.+.+...++........
T Consensus 224 ~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (355)
T TIGR00896 224 LIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR---------GIVAVLAVLQLVGLCGLLFAPMHGLWAWAL 293 (355)
T ss_pred HHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch---------HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 987 7999999999999999999999999999999995444 145555555555555454443332222233
Q ss_pred HHHHHhhhcccccccccccccC-CChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 343 SIALGFLALGRAGFAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
+.+.+.+...+........+.+ +++++...++.+...+++..++|.+.|.+.|+.
T Consensus 294 l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 294 VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333332222222222333444 367899999999999999999999999999988
No 67
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=2.3e-32 Score=254.73 Aligned_cols=356 Identities=10% Similarity=0.047 Sum_probs=264.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCch----HHHHHHHHHHHHHHhhhcC
Q 013609 18 TCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGR----KVLLFSFVLWSSTCFWLKL 93 (439)
Q Consensus 18 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~ 93 (439)
++........+.|.+|.+.+|+|.|.+++|++.+++.++..++++++|+++||+||| +.+.+...+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 555566678889999999999999999999999999999999999999999999984 3333332222 2233344
Q ss_pred CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHH
Q 013609 94 DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAAL 173 (439)
Q Consensus 94 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~ 173 (439)
++ +++.+++.|++.|++.+...|...++..++ +++|++..+......++|..+||++++.+.+++|||..|++.++.
T Consensus 91 ~~-~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~ 167 (382)
T PRK11128 91 AH-SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAG 167 (382)
T ss_pred cc-cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 54 899999999999999998999988888877 467889999999999999999999999999999999999887765
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHH
Q 013609 174 GGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALY 253 (439)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (439)
.++..+. .+..||++++.+++ ++.++...++++++|+|+++...+..++......
T Consensus 168 ~~~~~~~-~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~ 222 (382)
T PRK11128 168 VASMLLG-QLLRPTIMPQGESR------------------------QQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHA 222 (382)
T ss_pred HHHHHHH-HHccCCCCCccccc------------------------cccccccchHHHHHcChhHHHHHHHHHHHHHHhH
Confidence 4443332 23333322111000 0001123457889999999988888787777777
Q ss_pred HHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccC
Q 013609 254 VLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFR 333 (439)
Q Consensus 254 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (439)
....+.|.|+++ .|.++.+.+.+.....+..++...+.+++.||+++|+ .+..+.+..++..+.+...+
T Consensus 223 ~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~----------~l~~~~~~~~~~~~~~~~~~ 291 (382)
T PRK11128 223 AYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARD----------LLLLSAICGVVRWGLMGSTT 291 (382)
T ss_pred hHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH----------HHHHHHHHHHHHHHHHHhhh
Confidence 888889999977 8999999999888888889999999999999999988 77777777777776666665
Q ss_pred ChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHH-HHhhhhHHHHHHHHHHhhccccccccCCCCcccchh
Q 013609 334 SSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISN-TAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRA 412 (439)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~ 412 (439)
+.+......++.....+...+....+..+.+++++++..+..+ .....|..++|.+.|.+.|.. ++ .
T Consensus 292 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~-----------g~-~ 359 (382)
T PRK11128 292 ALPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL-----------GA-G 359 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------cH-H
Confidence 5554444333322223333344444555566767788999887 445667799999999999998 44 4
Q ss_pred HHHHHHHHHHHHHH
Q 013609 413 VFFIPGLLCILSSF 426 (439)
Q Consensus 413 ~~~~~~~~~~~~~~ 426 (439)
.+...+++.+++.+
T Consensus 360 ~~~~~~~~~~~~~~ 373 (382)
T PRK11128 360 VFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 56666666555433
No 68
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=4.7e-32 Score=259.16 Aligned_cols=376 Identities=13% Similarity=0.109 Sum_probs=275.9
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhccccccccccc-----CchHH-HHHHHHHH
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKI-----GGRKV-LLFSFVLW 84 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~ 84 (439)
...+++..+..+......++.+|...++.|.|.++++.+ +.....+ ++.+++|+++||+ ||||. +..+.+..
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 445556667777788889999999999999999999997 4444444 5889999999999 99986 66777777
Q ss_pred HHHHhhhcCCc--chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc-cc
Q 013609 85 SSTCFWLKLDP--NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK-YN 161 (439)
Q Consensus 85 ~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~ 161 (439)
+++...+++.+ ++++.+.+.+++.|++.+...+...+++.|++|+|||+++.++...+..+|.++++.++..+.+ ..
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~ 171 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL 171 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 77776666642 2788999999999999999999999999999999999999999999999999999999999988 57
Q ss_pred CCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHH
Q 013609 162 GPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAI 241 (439)
Q Consensus 162 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (439)
|||..|++.++..++..+..+ ..||++++.+++ + +.+++...++++.+++++.+..
T Consensus 172 GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~----~-------------------~~~~~~~~~l~~~~~~~~~~~~ 227 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIATL-LAPEPTDTIPVP----K-------------------TLEQAVVAPLRDFFGRNNAWLI 227 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-hcCCCccccccc----c-------------------chhhhHHHHHHHHHcCcCHHHH
Confidence 999999999988776655444 356654321000 0 0001112356778888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhh-hhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHH
Q 013609 242 VVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKM-MPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFM 320 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 320 (439)
.+..++..........+.+.|+.+..|++..+.+.... ...++.+++.++.|++.||+++|+ ....+.+
T Consensus 228 ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~----------~l~i~~~ 297 (491)
T PRK11010 228 LLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFR----------ALMIFGI 297 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH----------HHHHHHH
Confidence 66666666676777778888887778999999999874 556789999999999999999887 4444333
Q ss_pred HHHHHH---hhhcccC-ChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 321 VASIAL---MALPIFR-SSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 321 ~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
+.++.. ..+.... +.........+.....+...+.......+ .+++.+++..|+.+...++|..+++.+.|.+.|
T Consensus 298 l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~ 377 (491)
T PRK11010 298 LQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE 377 (491)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322 1222222 22222212222111122222223333333 455688999999999999999999999999999
Q ss_pred cccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 396 AAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
.. ||+..|.+.+++.+.+.+.....++
T Consensus 378 ~~-----------G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 378 AH-----------GWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred Hh-----------ChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 87 7999999999999888877776654
No 69
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=1e-32 Score=258.99 Aligned_cols=359 Identities=17% Similarity=0.173 Sum_probs=256.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhC--CCccchhhhhhh-----hhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh
Q 013609 18 TCVCYIERVGFSIAYTAAADAAG--VNQSSKGTILST-----FYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW 90 (439)
Q Consensus 18 ~~~~~~~~~~~~~~~~~i~~~~~--~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 90 (439)
.+.+++|+..+++..+.+.+++. .++++.+.+.+. ..++..+++++.|+++||+|||+++..+.++..++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 35678899999999999888865 445566665543 33334578899999999999999999999999999999
Q ss_pred hcCCcchHH--------HHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhh----
Q 013609 91 LKLDPNNVF--------ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLV---- 158 (439)
Q Consensus 91 ~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---- 158 (439)
+++++ +++ .+++.|+++|++.+...+...+++.|++|+|+|++..+..+.+..+|..+++.++..+.
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 82 IGLLP-SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred HhhCC-ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99997 765 58899999999999999999999999999999999999999999999999998876653
Q ss_pred ----cccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhc
Q 013609 159 ----KYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVV 234 (439)
Q Consensus 159 ----~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (439)
+.++||+.|++.+++.++.... ....||++++++++. ++++...+.++.++
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~ 215 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEKAQE------------------------KHKKKRGPIRETLT 215 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHHHHh------------------------ccccccCCHHHHHH
Confidence 3578999998877665554333 233445443221100 01112234456666
Q ss_pred chh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhH
Q 013609 235 NLP--VWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRK 312 (439)
Q Consensus 235 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 312 (439)
+++ ++......++..........+.|.|+++.+|.++.+.+.......+...++.++.+++.||+++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~--------- 286 (394)
T TIGR00883 216 KHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP--------- 286 (394)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH---------
Confidence 655 777777777777788888899999998888999999999888899999999999999999999888
Q ss_pred HHHHHHHHHH-HHHH-hhhcc--cCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHH-HHHhhhhHHHH
Q 013609 313 FLNTVGFMVA-SIAL-MALPI--FRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGIS-NTAGTLAGIVG 386 (439)
Q Consensus 313 ~~~~~~~~~~-~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~-~~~~~~g~~i~ 386 (439)
.......+. .... ..... .++........+......+...+.......| .|+++|+++.++. +....+|..++
T Consensus 287 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~ 365 (394)
T TIGR00883 287 -VLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFA 365 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHH
Confidence 433322222 2221 11111 1222222222222222222233334444444 4557899999985 45556788899
Q ss_pred HHHHHHhhccccccccCCCCcccchhHHHHHHHHHH
Q 013609 387 VDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCI 422 (439)
Q Consensus 387 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (439)
|.+.|.+.|+. +.++..++...+..+
T Consensus 366 p~~~g~l~~~~----------g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 366 PYIAAALVAMT----------GDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHc----------CcchhHHHHHHHHHH
Confidence 99999999987 236666666555443
No 70
>PRK09528 lacY galactoside permease; Reviewed
Probab=100.00 E-value=9.6e-32 Score=253.98 Aligned_cols=382 Identities=13% Similarity=0.102 Sum_probs=255.0
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHH-HHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHh
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAA-ADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCF 89 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 89 (439)
...+.+..++.........+.+|.. .+++|+|+.+.|++.+.+.++..++++++|+++||+|||+++.++..+.+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 91 (420)
T PRK09528 12 YWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFG 91 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3344456666666666667777765 555999999999999999999999999999999999999999887666554433
Q ss_pred hhc---CCc----chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 90 WLK---LDP----NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 90 ~~~---~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
... .++ +.....++.++..|.+.....+....+..+ . ++++++.++......++|..++|++++.+.+ .+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~ 168 (420)
T PRK09528 92 PFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-IN 168 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cC
Confidence 211 111 011112334444444444444444444332 2 3567888899999999999999999998876 59
Q ss_pred CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHH
Q 013609 163 PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIV 242 (439)
Q Consensus 163 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (439)
|+..|++.+++.++..++.++..+|++++...+ ++++ + ++++...++.++.+|||+++...
T Consensus 169 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~----------------~~~~~~~~~~~~~l~~~~~~~l~ 229 (420)
T PRK09528 169 PQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-NALG--A----------------NASAVSLKDALALLKLPKFWFLV 229 (420)
T ss_pred chHhHHHHHHHHHHHHHHHhcccccccchhhhc-cchh--c----------------ccccccHHHHHHHccCCCeEeeh
Confidence 999999988887776666555554443321100 0000 0 00111123345688899887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh---CCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHH
Q 013609 243 VNNFTFHYALYVLMNWLPTYFELGL---QLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGF 319 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 319 (439)
+........+.....+.|.|+.+.. +.+..+.+.+.+...+...++.++.|++.||+++|+ ....+.
T Consensus 230 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~----------~~~~~~ 299 (420)
T PRK09528 230 LYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN----------ALLLAG 299 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch----------hhHHHH
Confidence 6555555555556667788776643 455566788888888889999999999999999998 677777
Q ss_pred HHHHHHHhhhcccCChhHHHHHHHHHHHhhhccccccccc-ccccCCChhhHHHHH-HHHHhhhhHHHHHHHHHHhhccc
Q 013609 320 MVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVN-HMDIAPRYAGIVMGI-SNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~-~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
.+..+...+..+.++.+.......+..............+ .++.+++.+++..+. .+....+|..++|.+.|++.|..
T Consensus 300 ~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~ 379 (420)
T PRK09528 300 TIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI 379 (420)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7777776666666555543332222221111111222223 344566788887765 67788999999999999999988
Q ss_pred cccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 398 KTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
||+.+|.+.+++.++..++.+...+++
T Consensus 380 -----------G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 380 -----------GFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 799999998888777666665554443
No 71
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-31 Score=225.47 Aligned_cols=377 Identities=15% Similarity=0.186 Sum_probs=307.6
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHH
Q 013609 8 YLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSST 87 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 87 (439)
+..+..+.+..+----....++|.++++.+|+|+|.+..|.+.++..++..+.+++..+++.|+|.++.+..++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34444444444444455678899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc-CCchh
Q 013609 88 CFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN-GPNSV 166 (439)
Q Consensus 88 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~wr~~ 166 (439)
.++-... +.+.++.+-.+.|.|.+......+.++.+.+| |+-+..++++....++|..+++.+...+.++. |||..
T Consensus 91 ~~iR~~~--~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~a 167 (395)
T COG2807 91 ILIRSLG--GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGA 167 (395)
T ss_pred HHHHhcc--cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHH
Confidence 9999876 57888899999999999999999999999996 67899999999999999999999999998877 79999
Q ss_pred HHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHH
Q 013609 167 FNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNF 246 (439)
Q Consensus 167 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (439)
..+.+.++++..+.++ |...+++.. +.+.+..+-..++|+|..|.+.+...
T Consensus 168 L~~WAl~allAl~~Wl---Pq~~r~~~~--------------------------~~~~~~~~~~~vw~~~~aW~vtLfmG 218 (395)
T COG2807 168 LGFWALLALLALLIWL---PQALREQAA--------------------------SIATKLVSVRKVWRSPLAWQVTLFMG 218 (395)
T ss_pred HHHHHHHHHHHHHHHh---hhccccccc--------------------------ccccccccccccccCchhHHHHHHHH
Confidence 9999999888776665 332222111 11112222256899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHH
Q 013609 247 TFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIAL 326 (439)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (439)
++...+|....|+|.++.| .|+|..++|.+.+...+.+++.++..+.+.+|..+++ ........++.++.
T Consensus 219 lqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r---------~~~~~~~~~~l~G~ 288 (395)
T COG2807 219 LQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR---------PLVVLALLLMLVGL 288 (395)
T ss_pred hhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc---------hHHHHHHHHHHHHH
Confidence 9999999999999999999 7999999999999999999999999999999866555 35666666777777
Q ss_pred hhhcccCChhHHHHHHHHHHHhhhccccccccc-ccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCC
Q 013609 327 MALPIFRSSNGAIFCSSIALGFLALGRAGFAVN-HMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLS 405 (439)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~ 405 (439)
+.+.+.+........++++.+.++..+...... .....|++.++-+|+.+.++++-.+.||.+.|++.|..
T Consensus 289 ~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~-------- 360 (395)
T COG2807 289 VGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT-------- 360 (395)
T ss_pred HHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc--------
Confidence 777666655444444555555555443333333 33445688999999999999999999999999999999
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 406 SPESWRAVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
++|+..+.......++..+..+...|++.
T Consensus 361 --gsw~~~~~~l~~~~i~m~i~Gl~a~r~~~ 389 (395)
T COG2807 361 --GSWSAPLVLLALATLLMLIFGLRAGRNRY 389 (395)
T ss_pred --CChHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 69999999888888888777777666543
No 72
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=1.3e-30 Score=244.64 Aligned_cols=376 Identities=13% Similarity=0.051 Sum_probs=267.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhccccccccccc-----CchH-HHHHHHHHHHHH
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKI-----GGRK-VLLFSFVLWSST 87 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~ 87 (439)
....++..+.........+|.+.+|.|.|.+|+|++..+... .+.++++|+++||+ |||| .+..+.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 345577788888888999999999999999999999777765 69999999999999 8876 688888888777
Q ss_pred HhhhcCCc--chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc-cCCc
Q 013609 88 CFWLKLDP--NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY-NGPN 164 (439)
Q Consensus 88 ~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~wr 164 (439)
....++.+ ++++.+.+..++.++..+...+...+++.|++|+|||+++.++...+.++|..+++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 77766662 25788888888888888889999999999999999999999999999999999999999998885 5999
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHH
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVN 244 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (439)
..|++.++..++..+.. +..||++++++++. +..++..+++++++|||.++...+.
T Consensus 162 ~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~~-----------------------~~~~~~~~~~~~l~~~~~~~~~l~~ 217 (402)
T PRK11902 162 NTYLLMAGLMLAGALTT-LWAPEPEVPARPPR-----------------------SLGEAVVGPLRDFFSRRGAWALLLL 217 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCcccccccc-----------------------hhHHHHHHHHHHHHhCcCHHHHHHH
Confidence 99999888776654433 44555433211100 0001123456788999999887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhH-HHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHH
Q 013609 245 NFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPY-LNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVAS 323 (439)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (439)
.++..........+.+.++.+.+|+++.+.+.+....+ ++.+++..+.+++.||+++|+ ....+..+..
T Consensus 218 ~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~----------~l~~~~~~~~ 287 (402)
T PRK11902 218 IVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR----------SLMLFGVLQA 287 (402)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH----------HHHHHHHHHH
Confidence 66666554444455556677778999999998876554 468899999999999999888 4444444333
Q ss_pred HHH---hhhcccC-ChhHHHHHHHHHHHhh----hcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 324 IAL---MALPIFR-SSNGAIFCSSIALGFL----ALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 324 ~~~---~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
+.. ......+ +.+.......+..... ............+..| ++..++.+....++..+++.+.|.+.|
T Consensus 288 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~ 364 (402)
T PRK11902 288 VSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPTSGYLVE 364 (402)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 2223332 2232222221111111 1112222333333333 344566666677788777789999999
Q ss_pred cccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCccCC
Q 013609 396 AAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGERIFD 439 (439)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (439)
.. ||+..|.+.+++++++.++....+++-+++|
T Consensus 365 ~~-----------G~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (402)
T PRK11902 365 AY-----------GWPGFYLMTVVIALPGLALLWLMRGTIGRYE 397 (402)
T ss_pred Hh-----------ChHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 98 8999999999998888777766665544443
No 73
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=100.00 E-value=1.1e-30 Score=244.86 Aligned_cols=376 Identities=13% Similarity=0.092 Sum_probs=266.1
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHH-HHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh
Q 013609 12 ILTFISTCVCYIERVGFSIAYTAA-ADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW 90 (439)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 90 (439)
+.+...+++.+.....+.|.+|.. .+++|.++.+.|++.+.+.+++.+++++.|+++||+|||+.++.+....+++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~ 84 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAP 84 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 344556677777777888888875 5568999999999999999999999999999999999999998877666554432
Q ss_pred h---cCCc----chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 91 L---KLDP----NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 91 ~---~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
. .+.+ +.+..+++.|++.|++.+...+....+..|.. +++++.++......++|..++|.+++.+.+ .+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~ 161 (396)
T TIGR00882 85 FFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDP 161 (396)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCc
Confidence 2 2221 12345567789999998888888888887753 344567788888889999999999998865 699
Q ss_pred chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHH
Q 013609 164 NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVV 243 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
|.+|++.+.+.++..++.+...||+|+++..+ +. .+ . +++++...+.++++|||+++...+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~------------~---~~~~~~~~~~~~~l~~~~~~~~~l 222 (396)
T TIGR00882 162 QIVFWLGSGFALILMLLLMFAKPKAPSSATVA-NA---LG------------A---NASAFSLKLALELFRQRKFWMFVL 222 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh-cc---cc------------c---ccCCCCHHHHHHHHcCCcHHHHHH
Confidence 99999998888876665555555543321110 00 00 0 011112235678899999887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---CCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGL---QLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFM 320 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 320 (439)
..++....+.....+.|.|+++.+ +.+....+...+...+...++....+++.||+++|+ ...++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~----------~l~~~~~ 292 (396)
T TIGR00882 223 YVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN----------ALLIAGT 292 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch----------hHHHHHH
Confidence 766666666677778888888754 445556677788888888899999999999999998 7777777
Q ss_pred HHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHH-HHHHhhhhHHHHHHHHHHhhcccc
Q 013609 321 VASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGI-SNTAGTLAGIVGVDMTGKLLEAAK 398 (439)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~-~~~~~~~g~~i~~~~~g~l~~~~~ 398 (439)
+.++........++.+......++................++ .+++.+++..+. .+....+|+.++|.+.|++.|..
T Consensus 293 l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~- 371 (396)
T TIGR00882 293 IMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI- 371 (396)
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-
Confidence 777666665555555444333222111111111111122233 344667776665 67889999999999999999988
Q ss_pred ccccCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 013609 399 TTYSDLSSPESWRAVFFIPGLLCILSSFVFLL 430 (439)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
||+.+|.+.+++.++..+...+
T Consensus 372 ----------G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 372 ----------GFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred ----------ccHHHHHHHHHHHHHHHHHHHH
Confidence 8999999988888777665543
No 74
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.6e-33 Score=239.85 Aligned_cols=382 Identities=18% Similarity=0.121 Sum_probs=300.7
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhC-------------------------------------------
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAG------------------------------------------- 40 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------------------------------------------- 40 (439)
++.|..++..+....+.+.+......|..|....|.+
T Consensus 16 r~~r~lilviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~ 95 (464)
T KOG3764|consen 16 RRSRPLILVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSP 95 (464)
T ss_pred ccccceEEEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCc
Confidence 3444555566667777777777777777776554443
Q ss_pred -------CCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcc
Q 013609 41 -------VNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQG 113 (439)
Q Consensus 41 -------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 113 (439)
-+++++|++.+.+.+.+.+..++.|.+.||+|+|..+++|.+++..+++++++.. +++.++++|.+||+|.+
T Consensus 96 ~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~-sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 96 AEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN-SYPMLFVARSLQGVGSA 174 (464)
T ss_pred hhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHhhhhHH
Confidence 3456789999999999999999999999999999999999999999999999996 99999999999999999
Q ss_pred cchhhHHHHhhhccCCc-ccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCCC
Q 013609 114 FIFPSIHTVLAQWVPPH-ERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSE 192 (439)
Q Consensus 114 ~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (439)
....+..++++|.+|++ +|++++|+.-.+.++|..+||++||.+++..|.+.+|++.+.+.++...+.++..++++.+.
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 99999999999999966 58999999999999999999999999999999999999999999998888877765433332
Q ss_pred CCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc
Q 013609 193 HPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQ 272 (439)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 272 (439)
+ ..+...++++++++|..+.........+.+......-++.+..+....+..
T Consensus 255 ~----------------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w 306 (464)
T KOG3764|consen 255 D----------------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGW 306 (464)
T ss_pred c----------------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCc
Confidence 1 133345678999999999888887777777777788888988888885666
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHH---HHHHHHhh
Q 013609 273 EMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFC---SSIALGFL 349 (439)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 349 (439)
+.|..+....+...++..+.|.+.||++..++ .....+++..+......++.++....+.. ..++++..
T Consensus 307 ~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~w--------l~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~ 378 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGTNLFGKLADKYPHLRW--------LLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLA 378 (464)
T ss_pred ceeeeecccccchhccCchHHHHHHhcCchhH--------HHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHH
Confidence 99999999999999999999999999996551 25566666666666666666554432221 22222221
Q ss_pred h-cccccccccccccCCC---hhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHH
Q 013609 350 A-LGRAGFAVNHMDIAPR---YAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSS 425 (439)
Q Consensus 350 ~-~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (439)
. ...|...........+ ..|..+++......+|.++||.+.|.+.+.. |+++...+.++..++-.
T Consensus 379 dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i-----------GF~wl~~iig~~n~iya 447 (464)
T KOG3764|consen 379 DASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI-----------GFEWLMTIIGILNLIYA 447 (464)
T ss_pred HHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh-----------hHHHHHHHHHHHHHHHH
Confidence 1 1122222222222222 6799999999999999999999999999998 89998888888877766
Q ss_pred HHHHHhcc
Q 013609 426 FVFLLFST 433 (439)
Q Consensus 426 ~~~~~~~~ 433 (439)
-+..+++.
T Consensus 448 pvl~ll~~ 455 (464)
T KOG3764|consen 448 PVLLLLRI 455 (464)
T ss_pred HHHHHHHH
Confidence 66555543
No 75
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-31 Score=248.47 Aligned_cols=371 Identities=17% Similarity=0.187 Sum_probs=266.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhH-HHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFS-IAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSST 87 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 87 (439)
.++..++..++....+...++ ..+-.+.+|.+....+.+.+.+++.++++++.++++.+.||++-.+.+....+++++.
T Consensus 45 ~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~ 124 (495)
T KOG2533|consen 45 FILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLF 124 (495)
T ss_pred HHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHH
Confidence 344445555666666665444 2233356899999999999999999999999999999999999999999999999888
Q ss_pred HhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhh------ccc
Q 013609 88 CFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLV------KYN 161 (439)
Q Consensus 88 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------~~~ 161 (439)
.++..... |++.+++.|++.|+.++..+|....+++.|+.++||++.++++.+..++|.++|.+++..+. ...
T Consensus 125 ~~~~~~~~-s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 125 GFLTAAVH-SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred HHHHHHHh-hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 88777774 99999999999999999999999999999999999999999999999999999999998863 357
Q ss_pred CCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHH
Q 013609 162 GPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAI 241 (439)
Q Consensus 162 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (439)
||||.|++.++++++..++.++++|+.|.+..-..+++... ..++. ........+++.+...+++.+++|.+|..
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~----~~~~~-~~~~~~~~~~~~~~~~~~~a~~dp~vw~~ 278 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKEL----VVERL-RESPSGGIENKFKWKGFKEALKDPGVWPF 278 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHH----HHHHH-HhccCCCcccccCHHHHHHHHhchhHHHH
Confidence 99999999999999999999999999998541111111000 00000 00000011111445667899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHH
Q 013609 242 VVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMV 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 321 (439)
.+..++.....+++.+|+|.++++..|+|..++..+..+..++++++.+++|.++||.+.-. ..|........+.
T Consensus 279 ~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~-----~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 279 SLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF-----ARRLLFIVFLCLY 353 (495)
T ss_pred HHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHH
Confidence 99999999999999999999999966799999999999999999999999999999964100 0111233333344
Q ss_pred HHHHHhhhcccCChhHHHHHHHHHHH-hhhcccccccccccccCCC-hhhHHHHHHHHHhhhhHHHHHHHH
Q 013609 322 ASIALMALPIFRSSNGAIFCSSIALG-FLALGRAGFAVNHMDIAPR-YAGIVMGISNTAGTLAGIVGVDMT 390 (439)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~~~~~ 390 (439)
..++...+...+...........+.. .................++ ++-+..+......+.++.++|.+.
T Consensus 354 ~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~ 424 (495)
T KOG2533|consen 354 AIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLF 424 (495)
T ss_pred HHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhc
Confidence 44443444444323322222222222 2222222233333444553 455555555555555555555443
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=7.9e-31 Score=277.01 Aligned_cols=370 Identities=12% Similarity=0.038 Sum_probs=256.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHH-HHHHhhCCCc-cchhhhhhhhhhhhhhhcccccccccccCchHHHHH---HHHHHHHH
Q 013609 13 LTFISTCVCYIERVGFSIAYT-AAADAAGVNQ-SSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLF---SFVLWSST 87 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~ 87 (439)
..+++.+.+.+....+..... .+..+.+.+. ...++..+++.+.+.++++++|+++||+|||+++.. +.+...+.
T Consensus 19 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~ 98 (1140)
T PRK06814 19 TQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAAL 98 (1140)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHH
Confidence 334444444444444333333 3333333332 346888899999999999999999999999997633 22233333
Q ss_pred HhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhH
Q 013609 88 CFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVF 167 (439)
Q Consensus 88 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f 167 (439)
...+...+ |++.++++|+++|++.+...|+..+++.|++|+++|++++|+.+++.++|.++||++++++.+..+|++.|
T Consensus 99 ~~~~~~~~-s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~ 177 (1140)
T PRK06814 99 AIYGFHLN-SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV 177 (1140)
T ss_pred HHHHHHHh-hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 33333445 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHH
Q 013609 168 NAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFT 247 (439)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (439)
....+..++..+ ..+..|++++....... +. ...++....++.+.++|.++...+..++
T Consensus 178 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (1140)
T PRK06814 178 ALLMGIAVLGWL-ASLFIPKTGNAAPDLKI-DR-------------------NIIRSTITLLKYAKADKRIWLAILGISW 236 (1140)
T ss_pred HHHHHHHHHHHH-HHhhCCCCCCCCCCCee-cc-------------------chHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 544444444333 33444444332111000 00 0001122356788899999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHh
Q 013609 248 FHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALM 327 (439)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (439)
.++....+..++|.|+++.+|.++.+.+.+.+...++.+++.++.+++.|+..+++ ....+.++.++..+
T Consensus 237 ~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~----------~~~~~~~~~~~~~~ 306 (1140)
T PRK06814 237 FWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL----------YVPIGALLMGLFGL 306 (1140)
T ss_pred HHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee----------eehHHHHHHHHHHH
Confidence 88888888899999999989999999999999999999999999999998776665 23322222222222
Q ss_pred hhccc--------------------CChhHH-HHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHH
Q 013609 328 ALPIF--------------------RSSNGA-IFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVG 386 (439)
Q Consensus 328 ~~~~~--------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~ 386 (439)
.+.+. .+.+.. +..++++++.+....+.........+++.+|+++|+.+++.+++..++
T Consensus 307 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig 386 (1140)
T PRK06814 307 DLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAG 386 (1140)
T ss_pred HHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHH
Confidence 11111 222222 223333443333444444555566677899999999999999999999
Q ss_pred HHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHH
Q 013609 387 VDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILS 424 (439)
Q Consensus 387 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
+.+.|.+.+.. .++...+.+.+.+.++.
T Consensus 387 ~~~~g~l~~~~----------~~~~~~~~~~~~~~~~~ 414 (1140)
T PRK06814 387 TIILALLQALG----------FSIPWIILFIALANLIV 414 (1140)
T ss_pred HHHHHHHHHhc----------cCHHHHHHHHHHHHHHH
Confidence 99999998644 25666665555444333
No 77
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.7e-31 Score=250.32 Aligned_cols=406 Identities=15% Similarity=0.136 Sum_probs=319.1
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWS 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~ 85 (439)
+-|.+....++......-....++...+.++++++-+.++++|+.++....+.+..|+.+.+.||+|.|++.+.|.++.+
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 34667777777777777777788899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcchHHHHHHH-HHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCc
Q 013609 86 STCFWLKLDPNNVFILVVA-RLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPN 164 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~-r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr 164 (439)
++.++.++++ ++|++++. -++.|+|.+..+......+..+| +|+|+.+.|+...+.++|..+-|.+...+.+.+|||
T Consensus 123 ~g~~lssF~~-~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r 200 (509)
T KOG2504|consen 123 LGLLLSSFAT-SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWR 200 (509)
T ss_pred HHHHHHHHHh-hHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcH
Confidence 9999999997 88777655 56779999999999999999888 588999999999999999999999999999999999
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCC---------------C-cccccCccCccc------chhhhhccccccc
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKA---------------S-AAGFGESLLPMR------DQKVKVDNGGSAM 222 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~~~~~~------~~~~~~~~~~~~~ 222 (439)
+.+++.+.+.+-..+......|.+++..+++. + ..+..++..... .....+.+++.+.
T Consensus 201 ~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (509)
T KOG2504|consen 201 GALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRN 280 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccc
Confidence 99999999887766666666664443321100 0 000000000000 0000000000110
Q ss_pred -cccCch---HHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHH
Q 013609 223 -KAAKIP---WKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADH 298 (439)
Q Consensus 223 -~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 298 (439)
...... -.+++++|.++...+...+...++.....++|.|.++ .|++..+++.+.++.++..++++++.|++.|+
T Consensus 281 ~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~ 359 (509)
T KOG2504|consen 281 SPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADK 359 (509)
T ss_pred cchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc
Confidence 111111 1588999999999999999999999999999999996 89999999999999999999999999999999
Q ss_pred hhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHH
Q 013609 299 LITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNT 377 (439)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~ 377 (439)
...++ +.+..++.+..++..+..+..++........++...+.+...........+ +..++-..+.|+...
T Consensus 360 ~~~~~--------~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~ 431 (509)
T KOG2504|consen 360 PGIRA--------LVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLL 431 (509)
T ss_pred cccch--------HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHH
Confidence 88444 347777888888888777777776555444444444444444444444444 455889999999999
Q ss_pred HhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 378 AGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 378 ~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
++.++..+||++.|.+.|.. ++|...|+.+++..+++..+++..+
T Consensus 432 ~~gi~~l~gpPiag~~~d~t----------g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 432 FQGIGALVGPPIAGLLYDIT----------GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HhHHHHHcCcccceeeeecc----------CCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999999998 5799999999999999987777665
No 78
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.98 E-value=4.8e-30 Score=240.88 Aligned_cols=373 Identities=8% Similarity=-0.008 Sum_probs=258.4
Q ss_pred HHHHHHHHHHhhhhhH-HHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCc-hHHHHHHHHHHHHHHhhh
Q 013609 14 TFISTCVCYIERVGFS-IAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGG-RKVLLFSFVLWSSTCFWL 91 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~ 91 (439)
+++.+++.+....... +..+.+.+++|.+.+|+|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 4555666676666664 44555678899999999999999999999999999999999965 778888888888888888
Q ss_pred cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhc--------cCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 92 KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQW--------VPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 92 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
.+.+ +++.+.+.|++.|++.+...+...++..++ .....|.+..| .+|.+++|.+++.+.....|
T Consensus 87 ~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~ 159 (418)
T TIGR00889 87 AQVT-TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN 159 (418)
T ss_pred HHhc-CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh
Confidence 8886 899999999999998887777766654322 22234555554 47888889888877433335
Q ss_pred chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHH
Q 013609 164 NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVV 243 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
+ +|++.++..++..+. .+..||+|+.++++ +. ...+....+.++++|+|+++...+
T Consensus 160 ~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~-~~---------------------~~~~~~~~~~~~~~k~~~~~~~~~ 215 (418)
T TIGR00889 160 I-QLYITAGSSALLGVF-ALTLPDIPVAKSTA-KM---------------------SIKVMLGLDAFILFKNKRMAIFFF 215 (418)
T ss_pred H-HHHHHHHHHHHHHHH-HhcCCCCCCCcccc-cc---------------------CHHHHhhhhHHHHhcCCCeeeHHH
Confidence 4 466666666655444 34556654322110 00 000111123457889999888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcc--------cccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGLQLSL--------QEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN 315 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 315 (439)
..++..........+.|.++++ .|.++ ...+...+...+..+++.+..+++.||+++|+ .+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~----------~l 284 (418)
T TIGR00889 216 FSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK----------VM 284 (418)
T ss_pred HHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH----------HH
Confidence 7777766666677888888877 56554 45588888888899999999999999999998 77
Q ss_pred HHHHHHHHHHHhhhcccCC-h---hHHHH-HHHHHHHhhhcccccccccccc-cCCChhhHHHHHHH-HHhhhhHHHHHH
Q 013609 316 TVGFMVASIALMALPIFRS-S---NGAIF-CSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISN-TAGTLAGIVGVD 388 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~-~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~-~~~~~g~~i~~~ 388 (439)
..+.++..+....+..... . ..... .++.+.+.. ...+.......+ .++++|++++|+.+ ....+|..++|.
T Consensus 285 ~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~-~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~ 363 (418)
T TIGR00889 285 LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFD-FFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYI 363 (418)
T ss_pred HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 8888777776655554321 1 11111 222222222 222333344444 45589999999997 567899999999
Q ss_pred HHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 389 MTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 389 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
+.|.+.|..+..+ ..+|+..|.+.+++.+++.++..++.++
T Consensus 364 l~G~l~~~~g~~~-----~~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 364 LSGVMVEKMFAYG-----TFDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred HHHHHHHHhcccc-----CCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999862100 0158999988888877776666665544
No 79
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.6e-30 Score=237.63 Aligned_cols=402 Identities=13% Similarity=0.100 Sum_probs=288.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHH--------HhhC--CCccc----hhhhhhhhhhhhhhhcccccccccccCchHH
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAA--------DAAG--VNQSS----KGTILSTFYYGYACSQVPGGWAAQKIGGRKV 76 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~--~s~~~----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 76 (439)
.....++.+-.++....+++..+.+. +.+| .++++ .+.+.+++.+|.++|++..|.++||+|||..
T Consensus 13 ~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~ 92 (485)
T KOG0569|consen 13 VIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNA 92 (485)
T ss_pred HHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH
Confidence 33344555556666666666555433 3455 33333 4777889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCc--chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhh
Q 013609 77 LLFSFVLWSSTCFWLKLDP--NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFL 154 (439)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 154 (439)
+.++.++..++..+..++. +++++++++|++.|+..|......+-++.|..|.+.||..-...+.+..+|.+++..++
T Consensus 93 l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~ 172 (485)
T KOG0569|consen 93 LLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG 172 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 9998888877776665441 38999999999999999999999999999999999999999999999999999997666
Q ss_pred h--hhhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCC-CCCcccccCc-----cCcccchh----hhhccccccc
Q 013609 155 P--SLVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHP-KASAAGFGES-----LLPMRDQK----VKVDNGGSAM 222 (439)
Q Consensus 155 ~--~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~----~~~~~~~~~~ 222 (439)
. .+.+...|++.+....+++++..+... +.||+|++.-. ++|++++.+. ..++.++. ..+.++++..
T Consensus 173 l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~-~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~ 251 (485)
T KOG0569|consen 173 LPSLLGTEDLWPYLLAFPLIPALLQLALLP-FLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELE 251 (485)
T ss_pred cHHhcCCCcchHHHHHHHHHHHHHHHHHHh-cCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccc
Confidence 3 233456799999998888877665554 67999999755 5555554311 11111111 1111112222
Q ss_pred cccCchHHhhhcchhHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHH
Q 013609 223 KAAKIPWKRIVVNLPVWA-----IVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVAD 297 (439)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 297 (439)
++...++++++++|..+. +.+....+..+.+....|...++++ .|+++.++-+.....++...+.++++.++.|
T Consensus 252 ~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid 330 (485)
T KOG0569|consen 252 KKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLID 330 (485)
T ss_pred cccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335567789998866543 2333344455566677778888877 7999999999999999999999999999999
Q ss_pred HhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccC-----C-hhHH---HHHHHHHHHhh-hcccccccccccccCC-C
Q 013609 298 HLITKRILSVTRTRKFLNTVGFMVASIALMALPIFR-----S-SNGA---IFCSSIALGFL-ALGRAGFAVNHMDIAP-R 366 (439)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~ 366 (439)
|.|||+ ++..+..++.+..+++.... . .+.. +...+...... ....|.......|+.| +
T Consensus 331 ~~gRRp----------Lll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~ 400 (485)
T KOG0569|consen 331 RLGRRP----------LLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQS 400 (485)
T ss_pred hcCCcH----------HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCcc
Confidence 999999 77777777777666554321 1 1211 22222222222 3334455566666655 7
Q ss_pred hhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 367 YAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 367 ~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
.|+.+.+....+..+...+-...+..+.+.. |- ..|+.+.+.+.+..+..++..+|+|
T Consensus 401 ~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~-----------g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 401 ARSAAQSVATAVNWLSNFIVGFAFPPLQNVI-----------GP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------cc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999999999999999988 33 6777777777777666666655554
No 80
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.98 E-value=7.6e-30 Score=222.99 Aligned_cols=377 Identities=15% Similarity=0.144 Sum_probs=301.4
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
+........+....++.++......+.+|.+.+.++++..|.+.+...+..++.+.+++.|.+.+|+|+|+-++.++.++
T Consensus 9 ~~~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~ 88 (422)
T COG0738 9 KSVKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLY 88 (422)
T ss_pred CCceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHH
Confidence 33445566667777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhc---CCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc-
Q 013609 85 SSTCFWLK---LDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY- 160 (439)
Q Consensus 85 ~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~- 160 (439)
++++.+.. -. ++|..++++-++.|.|.+...++++++++...|+++..+-+++.+..+++|..++|++++.+..+
T Consensus 89 avg~~lF~pAa~~-~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~ 167 (422)
T COG0738 89 AVGAALFWPAASS-KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG 167 (422)
T ss_pred HHHHHHHhhhhhh-hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 99999885 33 38999999999999999999999999999999998899999999999999999999999988762
Q ss_pred ------------------cCCchhHHHHhHHHHHHHHHHhhhc-cCCCCCCCCCCCcccccCccCcccchhhhhcccccc
Q 013609 161 ------------------NGPNSVFNAEAALGGMWSLLWFKYA-TDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSA 221 (439)
Q Consensus 161 ------------------~~wr~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (439)
..|+++|...+....+..+...... |+.++..++ +
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~--------------------------~ 221 (422)
T COG0738 168 VALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPS--------------------------L 221 (422)
T ss_pred hhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccc--------------------------c
Confidence 2488889888877666555444332 222221111 0
Q ss_pred ccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 013609 222 MKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLIT 301 (439)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 301 (439)
.++......+++++|.++...+..+++........++++.|+.+..|.+..+++...+....+.++|+.++.++.+|+..
T Consensus 222 ~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~ 301 (422)
T COG0738 222 GASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKP 301 (422)
T ss_pred cccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 11111145789999999999999999999999999999999999889999999999999999999999999999999998
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhh
Q 013609 302 KRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTL 381 (439)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 381 (439)
.| .+....+...+.++.....++........+++.+.....+..........+ ++...+.+ .-.+.-+
T Consensus 302 ~k----------~Laf~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~-~l~maiv 369 (422)
T COG0738 302 EK----------YLAFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSG-LLVMAIV 369 (422)
T ss_pred HH----------HHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccce-eeeehee
Confidence 88 777766666666667777777666666777777777666666666666666 44333333 5556778
Q ss_pred hHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 382 AGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 382 g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
|+++-|++.|++.|.. +....+......|.+-.+.+.+.
T Consensus 370 GGAiiP~l~G~i~d~~-----------g~~~~~~~~pllc~lyV~~~~~~ 408 (422)
T COG0738 370 GGAIIPPLQGVIADMF-----------GIQLTFLIVPLLCYLYVLFFALI 408 (422)
T ss_pred cchHHHHHHHHHHHhh-----------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 55555554555555444333333
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=7.6e-30 Score=270.64 Aligned_cols=356 Identities=12% Similarity=0.074 Sum_probs=254.9
Q ss_pred HHHHHHHHHHHH-HhhhhhHHHHHHHHHhhCCCcc--chhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHH
Q 013609 11 VILTFISTCVCY-IERVGFSIAYTAAADAAGVNQS--SKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSST 87 (439)
Q Consensus 11 ~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~s~~--~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 87 (439)
+...+++.++.. .+......+.+.+..+++.+.+ ..+++.+++.+++.++++++|+++||+|||++++.+.++..+.
T Consensus 11 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~ 90 (1146)
T PRK08633 11 FLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGL 90 (1146)
T ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHH
Confidence 333444444443 3444455556667677776544 4689999999999999999999999999999999988766555
Q ss_pred Hhhh---cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc----
Q 013609 88 CFWL---KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY---- 160 (439)
Q Consensus 88 ~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---- 160 (439)
.++. ..+. +++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++|+.+++++.+.
T Consensus 91 ~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~ 169 (1146)
T PRK08633 91 TLLIVLAYYLG-WFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGN 169 (1146)
T ss_pred HHHHHHHHHHc-cHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 5443 3444 8999999999999999999999999999999999999999999999999999999999998875
Q ss_pred ----c-CCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcc
Q 013609 161 ----N-GPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVN 235 (439)
Q Consensus 161 ----~-~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (439)
+ +|++.+.+..+...+..++..+..||.+++...+.+.++ ....++....++.++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~~ 231 (1146)
T PRK08633 170 TPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK------------------YLFPKLLWRNLKLLRSD 231 (1146)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccc------------------cccHHHHHHHHHHHhcC
Confidence 2 344444444443333333444455665544321110000 00111223456778888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc-ccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQ-EMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFL 314 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 314 (439)
|.++...+..++..........++|.|+++.+|++.. +.+++.+...++.+++.++.+++.||.++++ .
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~----------~ 301 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG----------L 301 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc----------c
Confidence 9888887777777777778888999999998999998 8999999999999999999999999998887 5
Q ss_pred HHHHHHHHHHHHhhhcccCChhHHHHH-HHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHh
Q 013609 315 NTVGFMVASIALMALPIFRSSNGAIFC-SSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKL 393 (439)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 393 (439)
+.++.++.+++.+.+....+.+..++. ++++.+......+.........+++.||+++|+.+.+.+++..+++.+.+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 302 VPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 566666666666555555444333333 2233333333333333333445668999999999999999998888777665
Q ss_pred hc
Q 013609 394 LE 395 (439)
Q Consensus 394 ~~ 395 (439)
..
T Consensus 382 ~~ 383 (1146)
T PRK08633 382 SG 383 (1146)
T ss_pred HH
Confidence 44
No 82
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.97 E-value=7.6e-31 Score=256.18 Aligned_cols=290 Identities=15% Similarity=0.132 Sum_probs=227.7
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW 90 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 90 (439)
+...++..+.........+..++.+.++|+++..+.|++.+.+.++++++.++.++++||+|||+.+.++.+++++++++
T Consensus 35 ~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 35 SLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHH
Confidence 34455577777788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCc-------------------------------------------------c-hHHHHHHHHHHHhhhcccchhhHH
Q 013609 91 LKLDP-------------------------------------------------N-NVFILVVARLLVGVSQGFIFPSIH 120 (439)
Q Consensus 91 ~~~~~-------------------------------------------------~-~~~~l~~~r~l~G~~~~~~~~~~~ 120 (439)
+++.+ + .+..++++|+++|+|.+...+...
T Consensus 115 ~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~ 194 (633)
T TIGR00805 115 LSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI 194 (633)
T ss_pred HhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc
Confidence 87752 0 256788999999999999999999
Q ss_pred HHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc----------------------CCchhHHHHhHHHHHHH
Q 013609 121 TVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN----------------------GPNSVFNAEAALGGMWS 178 (439)
Q Consensus 121 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------------------~wr~~f~~~~~~~~~~~ 178 (439)
+++.|++|+++|++++++......+|..+|+++++.+.+.+ +|+..|++.+++.++..
T Consensus 195 ~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~ 274 (633)
T TIGR00805 195 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS 274 (633)
T ss_pred hhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887632 26677888888877766
Q ss_pred HHHhhhccCCCCCCCC-CCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 013609 179 LLWFKYATDPPRSEHP-KASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMN 257 (439)
Q Consensus 179 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (439)
+..+++.++.|++..+ +.+.++.... +..+... ........++....++++++||.++...+..++.....+++..
T Consensus 275 v~l~~~p~~lp~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 351 (633)
T TIGR00805 275 IPFFFFPKALPKEGKRVNVDVHETEKL--EKSEDKS-RKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYIT 351 (633)
T ss_pred HHHHhCccccCCcccccchhhhhhhcc--ccccccc-chhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 6555444444432211 1111110000 0000000 0000011122234567899999999999999999999999999
Q ss_pred HHHHHHHHhhCCcccccchhhhhhHH-HHHHHHHHHHHHHHHhhhcc
Q 013609 258 WLPTYFELGLQLSLQEMGSSKMMPYL-NMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 258 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~ 303 (439)
++|.|+++.+|+++.+++.+.....+ +.+++.+++|+++||++.+.
T Consensus 352 ~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~ 398 (633)
T TIGR00805 352 FLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNV 398 (633)
T ss_pred HHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccH
Confidence 99999999999999999998877666 56889999999999998554
No 83
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=8.8e-30 Score=241.33 Aligned_cols=379 Identities=15% Similarity=0.169 Sum_probs=297.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTC 88 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 88 (439)
..+..++.+..+..++..+.....+-+..+..-|+..++++.++..+...+.++++|.++||++|||+++.+-++.++..
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVA 89 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence 45566778888888888889999999888888899999999999999999999999999999999999999887766554
Q ss_pred hhhcCC----cchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCc
Q 013609 89 FWLKLD----PNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPN 164 (439)
Q Consensus 89 ~~~~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr 164 (439)
+..++. ..+.+.+++.-++.|++.+...|+.++++.|..|+++..++.++.+...++...+||.++|.+...+|-.
T Consensus 90 ~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~ 169 (524)
T PF05977_consen 90 LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAA 169 (524)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 333221 1278999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHH
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVN 244 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (439)
+.|.+.++..++.........++.++++.++ +...++.++.++-+.++|.+......
T Consensus 170 ~~f~inalsfl~~i~~l~~~~~~~~~~~~~~-----------------------e~~~~~l~~G~ryv~~~~~l~~~l~~ 226 (524)
T PF05977_consen 170 AAFLINALSFLISILALLRWKPPPPPSSLPR-----------------------ERFFSALREGLRYVRSSPPLRSVLLR 226 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHccccccccccch-----------------------hhhhhhHHHHHHHHhcchHHHHHHHH
Confidence 9999988766554444443332222111100 01123334455666677877766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHH
Q 013609 245 NFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASI 324 (439)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (439)
.++.+.....+...+|.+.++.+|.++...|++.+..+++.++|.++.+++.+|.++++ ++..+.+..++
T Consensus 227 ~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~----------lv~~~~~~~a~ 296 (524)
T PF05977_consen 227 SFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRR----------LVLLASLLFAL 296 (524)
T ss_pred HHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch----------hhHHHHHHHHH
Confidence 66666666667778999999999999999999999999999999999999998888877 77778888888
Q ss_pred HHhhhcccCChhHHHHHHHH-HHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccC
Q 013609 325 ALMALPIFRSSNGAIFCSSI-ALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSD 403 (439)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~ 403 (439)
.++.+.+.++.+......++ +.+................|++.||++++++++....+..+|..+.|.+.|..
T Consensus 297 ~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~------ 370 (524)
T PF05977_consen 297 ALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF------ 370 (524)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 88888887766654444433 33323333333344455566689999999999999999999999999999998
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 404 LSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+.+.++.+.++..+++.++....
T Consensus 371 -----g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 371 -----GVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHh
Confidence 78888888877776666666544
No 84
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=2.5e-29 Score=215.39 Aligned_cols=405 Identities=16% Similarity=0.155 Sum_probs=302.2
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
+.+|........+..-+.+.....+.+.|...+.++.+..|..++......+..+++..+|..+|++|||+.+.+.....
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 56777788888888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCc
Q 013609 85 SSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPN 164 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr 164 (439)
.+...+.+.++ |+..+.+.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.+....+.-.....+|||
T Consensus 154 ~v~~~is~~sp-nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr 230 (528)
T KOG0253|consen 154 GVFGVISGASP-NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWR 230 (528)
T ss_pred HHHHHhhcCCC-CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHH
Confidence 99999999999 999999999999999998 899999999999999999887777 999999999999998888999999
Q ss_pred hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCc----------cc----chhhhhccc--------cccc
Q 013609 165 SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLP----------MR----DQKVKVDNG--------GSAM 222 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~----~~~~~~~~~--------~~~~ 222 (439)
|.......+..+.+. ..++.||+|+....++++.++.+.... .. .....++++ .+..
T Consensus 231 ~~l~~~~~pl~~~a~-f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ 309 (528)
T KOG0253|consen 231 YLLFTSSTPLMFAAR-FLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAA 309 (528)
T ss_pred HHHHHHHhHHHHHHH-HHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccc
Confidence 998888866555444 445778999987666665543311000 00 000000000 0111
Q ss_pred cccCchHHhhhcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--C-----------------Ccccccchhhhh
Q 013609 223 KAAKIPWKRIVVN---LPVWAIVVNNFTFHYALYVLMNWLPTYFELGL--Q-----------------LSLQEMGSSKMM 280 (439)
Q Consensus 223 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g-----------------~~~~~~~~~~~~ 280 (439)
++......+++.. +.........+...+.+++........++... + .+...--.-..+
T Consensus 310 ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdlli 389 (528)
T KOG0253|consen 310 KEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLI 389 (528)
T ss_pred cccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHH
Confidence 2222333334321 23334455556666666665555555444311 0 011111112345
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccc
Q 013609 281 PYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNH 360 (439)
Q Consensus 281 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (439)
..+....|.++.+++.||+|||+ .+..+++++.+..+.+...........+.+.+-.+..........+.
T Consensus 390 tslaefPGlLIt~~iverlGRKk----------TMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYt 459 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKK----------TMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYT 459 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchh----------HHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEec
Confidence 56788999999999999999999 88999998888887776655555555555555556666667888899
Q ss_pred cccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 361 MDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 361 ~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
.|+.| ..|+++.|....+..+|+++.|.++ ...+. .-..+..+.+.+++++.+...+++-++|
T Consensus 460 PEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~------------s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 460 PEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL------------STSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred CcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc------------ceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 99988 6899999999999999999999998 33333 3456677788888888888888776654
No 85
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.97 E-value=1.5e-28 Score=230.04 Aligned_cols=368 Identities=11% Similarity=0.008 Sum_probs=264.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhh--hhhhhhhhhhhcccc-cccccccCchHHHHHHHHHH-HH
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTI--LSTFYYGYACSQVPG-GWAAQKIGGRKVLLFSFVLW-SS 86 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~--~s~~~~~~~~~~~~~-g~l~dr~Grr~~l~~~~~~~-~~ 86 (439)
...+...++..+.......+.+|.+.+|.|.|.+++|.+ .+...+...+.+|++ ++..||+||||..++.+.+. ..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 456677788999999999999999999999999999997 467788888888888 44799999999976655332 21
Q ss_pred HHhh---hcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 87 TCFW---LKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 87 ~~~~---~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
.... .....+....++..-.+..+..+...+...++..|..++++++...+....+..+|..+|+...+++.++.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 1211 2223212344455556666777778888888999999888889999999889899999999999999999999
Q ss_pred chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHH
Q 013609 164 NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVV 243 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
|..|++.+++.++..+..++..|++++++++ +++...++++.+|+|.++....
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~l~~~~~~~~~~ 215 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA---------------------------PLARRASLFRFFRRPLAWSLLA 215 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc---------------------------chhhHHHHHHHHcCcCHHHHHH
Confidence 9999999988877666655454443221100 0111234678899999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHH-HHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYL-NMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVA 322 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (439)
..++...+......+.+.|++| .|+++++.+.+...... ..+++..+.|++.||+++|+ ....+..+.
T Consensus 216 ~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~----------~l~~~~~~~ 284 (390)
T TIGR02718 216 LALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR----------TFILGVGLA 284 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH----------HHHHHHHHH
Confidence 8888888888888899999988 79999999998877764 56677899999999999988 555554443
Q ss_pred HHHHh-hhcc-----cCChhHHHHHHHHHHHhhhcccc-cccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhh
Q 013609 323 SIALM-ALPI-----FRSSNGAIFCSSIALGFLALGRA-GFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLL 394 (439)
Q Consensus 323 ~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 394 (439)
+...+ .... .+..........+.....+...+ .........++ +++++.+++.+...++|..++|.+.|.+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~ 364 (390)
T TIGR02718 285 GSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLT 364 (390)
T ss_pred HHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211 1111 11111112221221112222222 22333445555 78999999999999999999999999999
Q ss_pred ccccccccCCCCcccchhHHHHHHHHHHHHHHH
Q 013609 395 EAAKTTYSDLSSPESWRAVFFIPGLLCILSSFV 427 (439)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
|.. |++..|.+.+++.+++.+.
T Consensus 365 ~~~-----------G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 365 DRF-----------GYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHH-----------ccHHHHHHHHHHHHHHHHH
Confidence 987 7888998888777776544
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=1e-29 Score=235.08 Aligned_cols=320 Identities=12% Similarity=0.004 Sum_probs=234.1
Q ss_pred hhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhccccccccccc-----CchHH-HHHHHHHHHHHHhhhcCCcc--
Q 013609 25 RVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKI-----GGRKV-LLFSFVLWSSTCFWLKLDPN-- 96 (439)
Q Consensus 25 ~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~~~-- 96 (439)
....++..|.+.+|+|+|.+|+|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++.....++.++
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3567788999999999999999999765 455555 89999999998 89997 46677777777666667631
Q ss_pred hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC--------CchhHH
Q 013609 97 NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG--------PNSVFN 168 (439)
Q Consensus 97 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~--------wr~~f~ 168 (439)
+.+.+....++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+.+..+ ||..|+
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 666777888888988888899999999999999999999999999999999999999999988888 999999
Q ss_pred HHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchh---HHHHHHHH
Q 013609 169 AEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLP---VWAIVVNN 245 (439)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 245 (439)
+.++..++..+..++..||++++++.+ + ++.++..+++++++++|. ++...+..
T Consensus 162 i~ai~~l~~~~~~~~~~~e~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (356)
T TIGR00901 162 WTALLILPGLLVTLFLAKEPQEDASVP-K----------------------PLTQAVLKPIREFFQRKNMIQALLLLLLI 218 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCCcccccc-h----------------------hHHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 998877776555554555533221000 0 001112335667777775 77777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhH-HHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHH
Q 013609 246 FTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPY-LNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASI 324 (439)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (439)
++.....+....+.|.|+++ +|+++.+.+.+....+ +..+++.++.+++.||+++|+ .+..+.++.++
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~----------~l~~~~~~~~~ 287 (356)
T TIGR00901 219 VLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY----------ALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH----------HHHHHHHHHHH
Confidence 77788888889999999998 8999999988777665 567899999999999999988 55555555555
Q ss_pred HHhhhccc-----------CChhHHHHHHHH-HHHhhhcccccccccccccCCChhhHHHHHHHHHhh
Q 013609 325 ALMALPIF-----------RSSNGAIFCSSI-ALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGT 380 (439)
Q Consensus 325 ~~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 380 (439)
....+.+. ++.+......++ .++.............+..|+++||+..|+.+...+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 288 TNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 44433321 112222222222 222223333334444555667899999999888765
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=1.7e-28 Score=233.46 Aligned_cols=409 Identities=12% Similarity=0.053 Sum_probs=271.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHH-h--hCCCccchhhhhhhhhhhhhhhcccccccccc-cCchHHHHHHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAAD-A--AGVNQSSKGTILSTFYYGYACSQVPGGWAAQK-IGGRKVLLFSFVLW 84 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~ 84 (439)
..+..+++..++..+..+...+.+|.+.+ + +|.+..+.+++.+.+.+++.++++++|+++|| +|||+++.++.++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 34556667777777887778888887654 4 89999999999999999999999999999999 89999999999999
Q ss_pred HHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcc---cchhhHHHhhhhhHHHHHHhhhhhhhhccc
Q 013609 85 SSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHE---RSRSVSLTTSGMYLGAAMGMLFLPSLVKYN 161 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 161 (439)
+++.++.++++ +++.+.+.|.+.|+|.|...+...++++|++|+++ |++++++.+.+.++|..+||.+++.+.++.
T Consensus 90 ~~g~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~ 168 (475)
T TIGR00924 90 MLGHFMLAMSI-YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY 168 (475)
T ss_pred HHHHHHHHhcc-cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999986 88999999999999999999999999999998764 888999999999999999999999999989
Q ss_pred CCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchh-----------h-hhccc-----------
Q 013609 162 GPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQK-----------V-KVDNG----------- 218 (439)
Q Consensus 162 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~----------- 218 (439)
|||+.|.+.++..++..+. +...++..++..++.+..+..+++....... . ...+.
T Consensus 169 g~~~~f~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIGLLT-FFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVT 247 (475)
T ss_pred ChHHHHHHHHHHHHHHHHH-HHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 9999999987554443333 3232222111100000000000000000000 0 00000
Q ss_pred -------cccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc----cchhhhhhHHHHHH
Q 013609 219 -------GSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQE----MGSSKMMPYLNMFI 287 (439)
Q Consensus 219 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~ 287 (439)
+....++.....+..|...+..+.+...+.+..+....+.++.+.++..+.+... .+++.+...+..++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil 327 (475)
T TIGR00924 248 LAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVV 327 (475)
T ss_pred HHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHH
Confidence 0000001111111122234455556566667777777777888887754443222 56777888888888
Q ss_pred HHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc---------cCChhHHHH-HHHHHHHhhhccccccc
Q 013609 288 FSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI---------FRSSNGAIF-CSSIALGFLALGRAGFA 357 (439)
Q Consensus 288 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~ 357 (439)
.+++..++..|..+|..... ...-+.+|.++.++++..... ..+.++.+. .++...+-....+....
T Consensus 328 ~~p~~~~~~~~l~~~~~~~~---~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~ 404 (475)
T TIGR00924 328 GSPVLAMIWTRLGRKGKDPT---TPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLS 404 (475)
T ss_pred HHHHHHHHHHHHHhCCCCCC---cHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 87776666666666521100 111135666666666655442 123333333 33334444444444444
Q ss_pred ccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 358 VNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 358 ~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
...+..|++.||+.+|+......+|..+++.+.....+.. ++...|...++.+++..++.++..+
T Consensus 405 ~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 405 WWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ-----------GVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------chhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556689999999999999999999998888776654 6777777777776666665555443
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.97 E-value=3e-28 Score=231.80 Aligned_cols=418 Identities=14% Similarity=0.099 Sum_probs=263.2
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccc-cCchHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK-IGGRKVLLFSFV 82 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~ 82 (439)
+++++.+..++...+...+..+...+.++. +.+++|.+.++.+++.+.+.....+..+++|+++|| +||||++.++.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 345566666777777777777766655554 678899999999999999998888889999999999 999999999999
Q ss_pred HHHHHHhhhcCCcchHH-HHHHHHHHHhhhcccchhhHHHHhhhccCCc--ccchhhHHHhhhhhHHHHHHhhhhhhhhc
Q 013609 83 LWSSTCFWLKLDPNNVF-ILVVARLLVGVSQGFIFPSIHTVLAQWVPPH--ERSRSVSLTTSGMYLGAAMGMLFLPSLVK 159 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 159 (439)
++.++.+.+++++ +.. .++++|.++|+|.|...|...+++.|.+|++ +|++++++++.+.++|..+||.+++++.+
T Consensus 90 ~~~~g~~~~~~~~-~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~ 168 (489)
T PRK10207 90 VLAIGYFMTGMSL-LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD 168 (489)
T ss_pred HHHHHHHHHHHhc-cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999986 544 4558999999999999999999999999877 45789999999999999999999999999
Q ss_pred ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCC--C---CCCcccccC---------------ccCcccchhhhhc---
Q 013609 160 YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEH--P---KASAAGFGE---------------SLLPMRDQKVKVD--- 216 (439)
Q Consensus 160 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~---------------~~~~~~~~~~~~~--- 216 (439)
+.|||+.|++.++ +++..++.+...++..++.. + +.|..+... .+...........
T Consensus 169 ~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (489)
T PRK10207 169 KFGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSI 247 (489)
T ss_pred hhChHHHHHHHHH-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 9999999998654 44433333333332222111 1 011100000 0000000000000
Q ss_pred --cccccccccCchHHhhhcchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhCCccc----ccchhhhhhHHHHHHH
Q 013609 217 --NGGSAMKAAKIPWKRIVVNLPVWAIVVN--NFTFHYALYVLMNWLPTYFELGLQLSLQ----EMGSSKMMPYLNMFIF 288 (439)
Q Consensus 217 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~ 288 (439)
....-.++.+. .+.+|+|.+....+. ....+..+....+.++.+.++..+.+.. ....+.....+..++.
T Consensus 248 i~~~~f~~~~~~~--~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~ 325 (489)
T PRK10207 248 VVTIIFFREAFKL--DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVA 325 (489)
T ss_pred HHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHH
Confidence 00000000000 145566665443322 4445555566667788888753332110 1223334455667678
Q ss_pred HHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhh-------ccc---CChh-HHHHHHHHHHHhhhccccccc
Q 013609 289 SNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMAL-------PIF---RSSN-GAIFCSSIALGFLALGRAGFA 357 (439)
Q Consensus 289 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~ 357 (439)
.++.+++.||.++|+..... . .-..+++++.+++++.+ ... .+.+ ......+.+.+.....++...
T Consensus 326 ~pl~~~l~~rl~~r~~~~~~-~--~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~ 402 (489)
T PRK10207 326 SPILAGIYTHLGSKGKDLSM-P--MKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLA 402 (489)
T ss_pred HHHHHHHHHHHhhCCCCCCc-H--HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 88889999999988621111 0 12334444444444321 111 1222 223344445555555556667
Q ss_pred ccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 013609 358 VNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLL 430 (439)
Q Consensus 358 ~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
......|++.++.++|+.+...++|+.++..+......... ..++......+...|...++..+++.++.+.
T Consensus 403 ~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~-~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 403 MIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDN-ITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888999999999999999999999888765532110 0000011124667777777766655555544
No 89
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.97 E-value=1.2e-27 Score=225.78 Aligned_cols=408 Identities=13% Similarity=0.123 Sum_probs=283.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcC
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKL 93 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 93 (439)
.++.....++.....+.+++.+.+|+|- ..+..|+.+.+.++.++..++.|+++|.||||+.++.+.++..+|++.++-
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 3444444556666667888999999995 577889999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHH
Q 013609 94 DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAAL 173 (439)
Q Consensus 94 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~ 173 (439)
++ |...++.+..+.|+|.|.. ......++|..|.|.|....++...........++.++..+..+.+|||.|++..+.
T Consensus 128 A~-~~~~~iag~~l~GvgaG~~-~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~ 205 (599)
T PF06609_consen 128 AQ-NMNTFIAGMVLYGVGAGVQ-ELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIW 205 (599)
T ss_pred CC-cHHHHHHHHHHHHHhhHHH-HHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHH
Confidence 97 9999999999999997755 456667899999999988888777666666667788887777778999999999988
Q ss_pred HHHHHHHHhhhccCCCCCC-C-CCCCccccc-------------------------Cc-cCcccchh------------h
Q 013609 174 GGMWSLLWFKYATDPPRSE-H-PKASAAGFG-------------------------ES-LLPMRDQK------------V 213 (439)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~-------------------------~~-~~~~~~~~------------~ 213 (439)
..+..++.+++..++++++ + ++....+.. .. ..++++.. .
T Consensus 206 ~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv 285 (599)
T PF06609_consen 206 SGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLV 285 (599)
T ss_pred HHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHH
Confidence 7776555544443222211 1 111111110 11 11222211 0
Q ss_pred hhccccc-c-ccccCchHHhhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc---ccchhhhhhHHHHHH
Q 013609 214 KVDNGGS-A-MKAAKIPWKRIVVN-LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQ---EMGSSKMMPYLNMFI 287 (439)
Q Consensus 214 ~~~~~~~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~ 287 (439)
...-.|. . .+++..| .+++|+ |.+...++..+.....++....+.|+.....++-++. +.++.....+.+...
T Consensus 286 ~F~~wE~~~~~~~Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~ 364 (599)
T PF06609_consen 286 AFVVWEWFGAPKDPLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCA 364 (599)
T ss_pred HHHHhhhhccCCCCcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHH
Confidence 0011121 1 2344555 578887 5566666777778878888889999988887777664 567778888888999
Q ss_pred HHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc--cCChhHH-HHHHHHHHHhhhcccccccccccccC
Q 013609 288 FSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI--FRSSNGA-IFCSSIALGFLALGRAGFAVNHMDIA 364 (439)
Q Consensus 288 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (439)
+..+.+.+..|+++-| +.++++.+++.+++..+.. .++.... ...++.+++.+....+.........+
T Consensus 365 g~~i~g~l~~~ir~~K---------w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p 435 (599)
T PF06609_consen 365 GAVILGLLFSKIRHIK---------WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVP 435 (599)
T ss_pred HHHHHHHHHHHccchh---------HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeC
Confidence 9999999998876555 3555565555544444433 2333332 23333344444444444444455667
Q ss_pred CChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccccc------------------------------------------
Q 013609 365 PRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYS------------------------------------------ 402 (439)
Q Consensus 365 ~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~------------------------------------------ 402 (439)
+++.|++.|+..+++.+|+.++..+...+..+.-..+.
T Consensus 436 ~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~ 515 (599)
T PF06609_consen 436 DEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPE 515 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHH
Confidence 78999999999999999999999998776643221100
Q ss_pred ---------CCCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 403 ---------DLSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 403 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
......+|+.+|+....+.+++.+..++++..
T Consensus 516 i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~ 556 (599)
T PF06609_consen 516 IIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDI 556 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 01133467888888888888888887776543
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=3.4e-28 Score=231.52 Aligned_cols=341 Identities=14% Similarity=0.078 Sum_probs=245.1
Q ss_pred HhhhhhHH-HHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccc----cCchH-HHHHHHHHHHHHHhhhcCCcc
Q 013609 23 IERVGFSI-AYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK----IGGRK-VLLFSFVLWSSTCFWLKLDPN 96 (439)
Q Consensus 23 ~~~~~~~~-~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~ 96 (439)
.......+ ..+.+.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+.++
T Consensus 13 ~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~ 92 (437)
T TIGR00792 13 FIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPD 92 (437)
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCC
Confidence 33334443 4455777899999999999999999999999999999998 67755 566788888888887776652
Q ss_pred -----hHHHHHHHHHHHhhhcccchhhHHHHhhhcc-CCcccchhhHHHhhhhhHHHHHHhhhhhhhh-------cccCC
Q 013609 97 -----NVFILVVARLLVGVSQGFIFPSIHTVLAQWV-PPHERSRSVSLTTSGMYLGAAMGMLFLPSLV-------KYNGP 163 (439)
Q Consensus 97 -----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-------~~~~w 163 (439)
....+++.+++.+++.+...+...++..|.. +++||++..++.+.+..+|..+++.+.+.+. +..+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~ 172 (437)
T TIGR00792 93 FSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGW 172 (437)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccH
Confidence 2467778889999998888888888999987 4689999999999888888877766655443 24689
Q ss_pred chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHH
Q 013609 164 NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVV 243 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
|+.+.+.++++++..++..+..||++++.+++ + +++.+..+.++++++||.++...+
T Consensus 173 ~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~----~-------------------~~~~~~~~~~~~l~~~~~~~~~~~ 229 (437)
T TIGR00792 173 FMFALVLALIGVVSLIICFFGTKERYSEIPKN----I-------------------EKKLSLKQIFKALFKNDQLLILCL 229 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc----c-------------------ccCCCHHHHHHHHhCCHHHHHHHH
Confidence 99999999888887776666666654221100 0 001122345678889999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVAS 323 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (439)
..++...+......+.+.|.++..+ ++.+.+.+.....++.+++.++.+++.||+++|+ ....+..+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~----------~~~~~~~~~~ 298 (437)
T TIGR00792 230 AYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI----------LFAGGILLMV 298 (437)
T ss_pred HHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH----------HHHHHHHHHH
Confidence 8888888777776677777766555 4555666777778899999999999999999988 6677776666
Q ss_pred HHHhhhcccC-ChhHHHHHHH-HHHHhhhccccccccccccc--------CCChhhHHHHHHHHHhhhhHHHHHHHHHHh
Q 013609 324 IALMALPIFR-SSNGAIFCSS-IALGFLALGRAGFAVNHMDI--------APRYAGIVMGISNTAGTLAGIVGVDMTGKL 393 (439)
Q Consensus 324 ~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 393 (439)
++...+...+ +........+ .+.+.... .+.......+. .++.+|.+.|+.+....+|..+++.+.|.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 299 LGYLIFFFAGSNLPLILVLIILAGFGQNFV-TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHHHHHHHcchhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665554433 2222222222 22222222 23333333332 235689999999999999999999999999
Q ss_pred hcccc
Q 013609 394 LEAAK 398 (439)
Q Consensus 394 ~~~~~ 398 (439)
.+..+
T Consensus 378 l~~~G 382 (437)
T TIGR00792 378 LGIIG 382 (437)
T ss_pred HHHcC
Confidence 98764
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.96 E-value=2.2e-28 Score=210.94 Aligned_cols=334 Identities=16% Similarity=0.104 Sum_probs=227.9
Q ss_pred cchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHh
Q 013609 44 SSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVL 123 (439)
Q Consensus 44 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 123 (439)
.-.|.+.+.|++++.+.++.+|.++||+|||+++++|++..++...+.+++. |+..++++|++.|+..| ......+++
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~-~F~afv~aR~l~Gi~kg-nl~v~rAii 145 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR-NFAAFVLARFLGGIFKG-NLSVIRAII 145 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhccC-chHHHHHHH
Confidence 3469999999999999999999999999999999999999999999999996 99777777999999988 668899999
Q ss_pred hhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc---ccCCchhHHHHhHHHH----HHHHHHhhhccCCCCCCCCCC
Q 013609 124 AQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK---YNGPNSVFNAEAALGG----MWSLLWFKYATDPPRSEHPKA 196 (439)
Q Consensus 124 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~~wr~~f~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 196 (439)
+|.+++|+|+++++..+...++|.++||.+|+++.+ ..| +.+|.....+.. .-.....+++||+-+.++++
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~- 223 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN- 223 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc-
Confidence 999999999999999999999999999999999987 222 223333222222 11223344667764333222
Q ss_pred CcccccCccCcccchhhhhccccccccccCchHHhhhcchhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 013609 197 SAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPV-------WAIVVNNFTFHYALYVLMNWLPTYFELGLQL 269 (439)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 269 (439)
|++....+..+ ++. +..+.....-...+||++. ....+..+.+...+..+.+..+.+-.+.+|+
T Consensus 224 ~~~~~~~~~~~-~~~--------~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ 294 (451)
T KOG2615|consen 224 DEHSTLQEAAD-DRL--------ALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGY 294 (451)
T ss_pred ccccchhhhhh-hhh--------hhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCC
Confidence 11110000000 000 0000001111223344322 1233334444444444555555555667899
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhh
Q 013609 270 SLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFL 349 (439)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (439)
++.|.|.+++..++.+.+.+.......||.+... +..+..+..++...++++.....+........+..+..
T Consensus 295 ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~--------~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~ 366 (451)
T KOG2615|consen 295 SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNI--------KAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFST 366 (451)
T ss_pred ChhhheeeeehhhHHHHHHHHhccccccccccch--------hhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHH
Confidence 9999999999888888877776666666655111 12556666666666666666666555555555544445
Q ss_pred hccccccccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccc
Q 013609 350 ALGRAGFAVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAK 398 (439)
Q Consensus 350 ~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 398 (439)
....+......... ++++||+.+|+....+.++.++||.+.|.+..+..
T Consensus 367 A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 367 ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQ 416 (451)
T ss_pred HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEec
Confidence 55555555555544 55899999999999999999999999999998874
No 92
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2e-28 Score=236.07 Aligned_cols=401 Identities=17% Similarity=0.168 Sum_probs=279.7
Q ss_pred HHHHHHHHHHHHHHh--hhhhHHHHHHHHHhhCC---Cc----cchhhhhhhhhhhhhhhcccccccccccCchHHHHHH
Q 013609 10 IVILTFISTCVCYIE--RVGFSIAYTAAADAAGV---NQ----SSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFS 80 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~---s~----~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 80 (439)
......++.+..+.+ ....++....+.++... +. .+.+++.+.+.++..+++++.|+++|++|||+.++++
T Consensus 46 ~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~ 125 (513)
T KOG0254|consen 46 LALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLA 125 (513)
T ss_pred HHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 334444555555554 45666777777664321 12 2448999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc
Q 013609 81 FVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY 160 (439)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 160 (439)
.+++.++.+++++++ |+++++++|+++|+|.|......+.+++|..|++.||...+..+....+|..++..++....+.
T Consensus 126 ~~~~~iG~ii~~~a~-~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~ 204 (513)
T KOG0254|consen 126 VVLFLIGAIIIALAP-SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV 204 (513)
T ss_pred HHHHHHHHHHHHHhh-hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC
Confidence 999999999999997 9999999999999999999999999999999999999999999999999999997666555433
Q ss_pred -cCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCc-----c-Cccc-chhh-hhc---cccccccccCch
Q 013609 161 -NGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGES-----L-LPMR-DQKV-KVD---NGGSAMKAAKIP 228 (439)
Q Consensus 161 -~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~-~~~~-~~~---~~~~~~~~~~~~ 228 (439)
.+||..+.+..+++++..+. .++.||+|++..++.+.++..+. . .+++ +... ... ..+....+....
T Consensus 205 ~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (513)
T KOG0254|consen 205 YAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKAS 283 (513)
T ss_pred CccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccccccc
Confidence 58999999999888887777 77889999987665555443311 0 0010 0000 000 000000111112
Q ss_pred HHhhh----cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc
Q 013609 229 WKRIV----VNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRI 304 (439)
Q Consensus 229 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 304 (439)
+++++ +++.++...+..+.+..+.+....|.+.+++. .|.+... .......++...++..+...+.||+|||+
T Consensus 284 ~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~- 360 (513)
T KOG0254|consen 284 WGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRK- 360 (513)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHH-
Confidence 23333 33445566666777777778888999999887 5666443 45556777888888888899999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhhcccC----C--------hhHHHHHHHH-HHHhhhcccccccccccccCC-ChhhH
Q 013609 305 LSVTRTRKFLNTVGFMVASIALMALPIFR----S--------SNGAIFCSSI-ALGFLALGRAGFAVNHMDIAP-RYAGI 370 (439)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~ 370 (439)
++..+...+.++.+++.... . .+..+...++ ...+.....+..+....|..| +.|+.
T Consensus 361 ---------lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~ 431 (513)
T KOG0254|consen 361 ---------LLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSK 431 (513)
T ss_pred ---------HHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhh
Confidence 77777777777776654321 1 1122222222 223333344555567778777 89999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHH-HHHHhccCC
Q 013609 371 VMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSF-VFLLFSTGE 435 (439)
Q Consensus 371 ~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 435 (439)
+.++...++.....+-......+.+.. +....|......+.+... ...+..+|.
T Consensus 432 ~~s~~~~~n~~~~~~v~~~~~~~~~~~-----------~~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 432 GASLAVAVNWLWNFLISFFFPFITEAL-----------GIGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc-----------cccchHHHHHHHHHHHHHHHheEEcccC
Confidence 999999999998877766666666554 234555555555555555 344444443
No 93
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.96 E-value=5.7e-33 Score=265.25 Aligned_cols=398 Identities=17% Similarity=0.203 Sum_probs=273.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHH--HhhCCCc---------cchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHH
Q 013609 14 TFISTCVCYIERVGFSIAYTAAA--DAAGVNQ---------SSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFV 82 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~--~~~~~s~---------~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 82 (439)
..++.+.+++|....+...+... .+++.+. .+.++..+...++..++++++|.++||+|||+.+.++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 34556888888888877776655 2222222 236789999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCc--chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc
Q 013609 83 LWSSTCFWLKLDP--NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY 160 (439)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 160 (439)
+..+++++.++++ +|++.+.++|+++|++.|...+....++.|..|+++|++..++.+.+..+|..++..++..+.+.
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999994 27999999999999999999999999999999999999999999999999999998887665443
Q ss_pred c---CCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccch-----hhhhcccc-ccccccCchHHh
Q 013609 161 N---GPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQ-----KVKVDNGG-SAMKAAKIPWKR 231 (439)
Q Consensus 161 ~---~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~ 231 (439)
. +||..+.+.++++++..+.. .+.||+|++...+.+.+++.+........ +.++..++ ++.++.+..+++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRD 243 (451)
T ss_pred cccccccccccccccccccccccc-cccccccceecccccccccccccccccccccccccccccccccccccccceeeee
Confidence 3 49999999998887655544 57799999987776666554332221110 00111110 111111134566
Q ss_pred hhcchh----HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccc
Q 013609 232 IVVNLP----VWAIVVNNF-TFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILS 306 (439)
Q Consensus 232 ~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 306 (439)
+++++. +...+.... ....+.+....+.|.++++ .+.+.. -.......+...++.++...+.||+|||+
T Consensus 244 l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~--- 317 (451)
T PF00083_consen 244 LFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRK--- 317 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccc-cccccc--ccccccccccccccccccccccccccccc---
Confidence 666643 222222222 2233334455666666655 566665 22334455667777778889999999998
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhc--c---cCC----hhHHHHHHHHH-HHhhhcccccccccccccCC-ChhhHHHHHH
Q 013609 307 VTRTRKFLNTVGFMVASIALMALP--I---FRS----SNGAIFCSSIA-LGFLALGRAGFAVNHMDIAP-RYAGIVMGIS 375 (439)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~ 375 (439)
+...+..++.++...+. . .++ ....+....+. ..+.....+....+..|..| +.|+++.|+.
T Consensus 318 -------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~ 390 (451)
T PF00083_consen 318 -------LLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLS 390 (451)
T ss_pred -------ccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 77777776666665553 1 112 11122222222 22222333445566677777 7999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 376 NTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 376 ~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
...+++++.+++.+...+.+.. +....+.+.+++++++.+...++.+|.|
T Consensus 391 ~~~~~i~~~i~~~~~~~~~~~~-----------~~~~~~~i~~~~~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 391 YAVGRIGGFIIPFLFPYLFNNL-----------GGWGVFLIFAGVCLIAIIFVYFFLPETK 440 (451)
T ss_pred cccccccccccccccccccccc-----------cccccchhhHHHHHHHHhheeEEEeeCC
Confidence 9999999999999998888876 3345566666666666655555555443
No 94
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.3e-28 Score=217.58 Aligned_cols=413 Identities=14% Similarity=0.092 Sum_probs=294.1
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhC--------CCccchhhhhhhhhhhhhhhcccccccccccCchH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAG--------VNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRK 75 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~ 75 (439)
.+++...+.+...+.+.+.+|...++.+.|.+...+. .++.-.+.+..+..+|..++|+++|++.||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 4566677888889999999999999999998876652 23445688888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCcc------hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHH
Q 013609 76 VLLFSFVLWSSTCFWLKLDPN------NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAM 149 (439)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 149 (439)
++...++++.+++++++++.. -+..+...|++.|+|.|+.+|.+.+..+|...+++||...+...+..++|...
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 999999999999998887621 36788999999999999999999999999999999999999999988888888
Q ss_pred Hhhhhhhhhc----c-----------cCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCc-ccccC-ccCcccchh
Q 013609 150 GMLFLPSLVK----Y-----------NGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASA-AGFGE-SLLPMRDQK 212 (439)
Q Consensus 150 g~~~~~~l~~----~-----------~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~ 212 (439)
|.+++-.+.. . .=||..+.+.+++++.+....+ ..||+++......++ +.+.+ .......+.
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~ 274 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETARYTALVSKKLKQAAGDMKKVLSVDI 274 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhHHHHhhcCHhhhhhcccccccccc
Confidence 8777655432 1 1299999888888777655544 557877655211111 11100 000000000
Q ss_pred hhhcccccc---ccccCchHHhhhc---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccch--------hh
Q 013609 213 VKVDNGGSA---MKAAKIPWKRIVV---NLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGS--------SK 278 (439)
Q Consensus 213 ~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~ 278 (439)
..++..+.. .++....+.+.+. -+.+...+..+|+.-.+++....+....+++ .|+.+.+.-+ ..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~ 353 (538)
T KOG0252|consen 275 EAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGN 353 (538)
T ss_pred chhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHH
Confidence 000000111 1111111222222 2566677888899999999999999999887 6776655443 11
Q ss_pred h-hhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCCh----hHHHHHHHHHHHhhhccc
Q 013609 279 M-MPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSS----NGAIFCSSIALGFLALGR 353 (439)
Q Consensus 279 ~-~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 353 (439)
. +...+.++|..+...++|++||++ ....+++++.+..+.+....+. ....++..+...+..+.+
T Consensus 354 ~iia~~~~vPGyw~tv~~id~iGRk~----------iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGP 423 (538)
T KOG0252|consen 354 LIIAVCSTVPGYWFTVYFIDIIGRKY----------IQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGP 423 (538)
T ss_pred HHHHHHccCCceeEEEEEeehhhhHH----------HHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCC
Confidence 1 112223335556667899999999 8888999998888887765442 222333333344444444
Q ss_pred c-cccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 354 A-GFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 354 ~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
. ....+..|.+| +.|++..|+....+..|++++...+.++.++. .+...+.+.++++.+++++++.+..+++
T Consensus 424 n~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~------yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 424 NATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN------YPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred CceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc------CCccccchHHHHHHHHHHHHhHheeEEe
Confidence 3 34566777777 79999999999999999999999999999843 1122489999999999999999998888
Q ss_pred ccC
Q 013609 432 STG 434 (439)
Q Consensus 432 ~~~ 434 (439)
++.
T Consensus 498 pEt 500 (538)
T KOG0252|consen 498 PET 500 (538)
T ss_pred ecc
Confidence 743
No 95
>PTZ00207 hypothetical protein; Provisional
Probab=99.96 E-value=8.6e-27 Score=221.50 Aligned_cols=422 Identities=11% Similarity=0.032 Sum_probs=291.3
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL 83 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 83 (439)
..+||..+........+.+ ..+.++...|.+.+++|+|..|.+++.++. ......+++.|++.||+|||+++.++.++
T Consensus 23 e~~Rw~~lva~~~~~~~~g-~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTS-FMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred ccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 3567766665555544444 345677888999999999999999998874 34456777899999999999999999999
Q ss_pred HHHHHhhhcCC------cchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHH-Hhhhhhh
Q 013609 84 WSSTCFWLKLD------PNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAM-GMLFLPS 156 (439)
Q Consensus 84 ~~~~~~~~~~~------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~ 156 (439)
++++.++++++ + +++.+.+.|+++|+|.+...+.....+.+|+| ++||++.|+...+.++|..+ +++..++
T Consensus 101 ~~iG~ll~ala~~~~i~~-s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEG-SVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHhcccccC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 4 89999999999999999999999999999996 78999999999999999986 4444444
Q ss_pred hhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCC--CC--CCccccc----------Ccc-----------------
Q 013609 157 LVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEH--PK--ASAAGFG----------ESL----------------- 205 (439)
Q Consensus 157 l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~----------~~~----------------- 205 (439)
+. .+|+..|++.+++.++..++...+.+++|.... ++ .++++.. ++.
T Consensus 179 ~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~ 256 (591)
T PTZ00207 179 FS--DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILI 256 (591)
T ss_pred HH--HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHH
Confidence 43 478999999999988877777777666553221 11 1111110 000
Q ss_pred ---------------------------------------------------Cccc-chhhhh-----cccc--------c
Q 013609 206 ---------------------------------------------------LPMR-DQKVKV-----DNGG--------S 220 (439)
Q Consensus 206 ---------------------------------------------------~~~~-~~~~~~-----~~~~--------~ 220 (439)
.++. +....+ ...+ +
T Consensus 257 ~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (591)
T PTZ00207 257 VFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVD 336 (591)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCcccccccccccccccccccccccccccc
Confidence 0000 000000 0000 0
Q ss_pred -cccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc--cchhhhhhHHHHHHHHHHHHHHHH
Q 013609 221 -AMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQE--MGSSKMMPYLNMFIFSNIGGVVAD 297 (439)
Q Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d 297 (439)
..++..+++++.+++..+|.+....++.......+...+.+..+..-|.+.++ ...+.++.++.+.+|++..|.+.
T Consensus 337 ~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~- 415 (591)
T PTZ00207 337 YIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE- 415 (591)
T ss_pred CCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-
Confidence 00111236778888999999999999999998899999999988832763333 33378899999999999999988
Q ss_pred HhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHH
Q 013609 298 HLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNT 377 (439)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 377 (439)
.+-+|+...+...|...+.+..+ +.++.+++...-+.....+..++...+.+...+.......|++.++-|+-.-+...
T Consensus 416 ~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~ 494 (591)
T PTZ00207 416 IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFL 494 (591)
T ss_pred HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhH
Confidence 33333321122334445555555 44444444443221334444444444445556667777777777888888888887
Q ss_pred HhhhhHHHH-HHHHHHhhccccccccCC--CCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 378 AGTLAGIVG-VDMTGKLLEAAKTTYSDL--SSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 378 ~~~~g~~i~-~~~~g~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
..-+|..+- -.++|.++|....++.+. .++.=++.+|++++++++.+.+....+.-
T Consensus 495 a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~ 553 (591)
T PTZ00207 495 GSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHL 553 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheee
Confidence 777777665 568888998765332211 13445889999999999999888766543
No 96
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=5e-27 Score=227.78 Aligned_cols=341 Identities=13% Similarity=0.111 Sum_probs=248.1
Q ss_pred HHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccc
Q 013609 36 ADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFI 115 (439)
Q Consensus 36 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 115 (439)
.+.++.+.....+..+++.+|..+|++++|+++||+|||++++.++++..++.++.++++ |++.+++.|+++|++.+..
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~-~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP-NYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhccch
Confidence 345566778889999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred hhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCC
Q 013609 116 FPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPK 195 (439)
Q Consensus 116 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (439)
......++.|++++++|+.+..+ ......+..++++.++++.. +||+.+++..+++.+..++ +++.||+|++...+
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK 264 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence 99999999999999999999999 77777888888888888877 8999999999998876666 55777999998776
Q ss_pred CCcccccCccCccc---------chhhhhc----cccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013609 196 ASAAGFGESLLPMR---------DQKVKVD----NGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTY 262 (439)
Q Consensus 196 ~~~~~~~~~~~~~~---------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (439)
.+.+++.+...+.. .....+. .......++...+.++++.|++....+...+..........-++..
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~ 344 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLN 344 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhh
Confidence 66655442211110 0000000 0011111222446788888765554444444433322222222222
Q ss_pred HHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChh---HHH
Q 013609 263 FELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSN---GAI 339 (439)
Q Consensus 263 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 339 (439)
... +|.+. .......+.....+....+...|+.|||. ....+..+..++++...+..... ...
T Consensus 345 ~~~-lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (521)
T KOG0255|consen 345 VSG-LGGNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRP----------PLFLSLFLAGIGLLLFGWLPDDLGGWLHW 410 (521)
T ss_pred hhh-cCchH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHH----------HHHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 222 33332 23334444567777777788999998888 88888888888888777765433 244
Q ss_pred HHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 340 FCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
....++.+...........+..|..| ..|..+.+..+....++++++|.+.-....
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 411 ILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44555555555444455677777777 689999999999999999999988765544
No 97
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=4.5e-26 Score=206.55 Aligned_cols=354 Identities=13% Similarity=0.037 Sum_probs=245.0
Q ss_pred hhhhhHHHHHHHHHhhCCCccc-hhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHH
Q 013609 24 ERVGFSIAYTAAADAAGVNQSS-KGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILV 102 (439)
Q Consensus 24 ~~~~~~~~~~~i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (439)
-+...+.+.|.+.+|+|+|++| .|.+.+++..+|++.+++.|.++||+|.|+++.++.+.+++.+++.++++ ++..+.
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~-Sl~~L~ 119 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT-SVWHMQ 119 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 4677888999999999999999 99999999999999999999999999999999999999999999999996 999999
Q ss_pred HHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhH--HHHHHHHH
Q 013609 103 VARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAA--LGGMWSLL 180 (439)
Q Consensus 103 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~--~~~~~~~~ 180 (439)
+.|++.|++.|... +...++.+|+|+++|+++.++..++..+|.++++++++. ...+|||+-+.+.-+ .+....++
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999998 999999999999999999999999999999999999999 556899976554422 22334445
Q ss_pred HhhhccCCCCCCC--CCCCcccccCccCcccchh-hhhccc-c-----ccccccCchHHhhhcchhHHHHHHHHHHHHHH
Q 013609 181 WFKYATDPPRSEH--PKASAAGFGESLLPMRDQK-VKVDNG-G-----SAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYA 251 (439)
Q Consensus 181 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (439)
+.+++|..++..- ++.+.++....+.+..... .....+ . ...+....++++..+||.+..-.+-..+...+
T Consensus 198 ~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g 277 (511)
T TIGR00806 198 LALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAG 277 (511)
T ss_pred HHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhH
Confidence 5556665444321 1110000000000000000 000000 0 00011223445667888887777777777777
Q ss_pred HHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 013609 252 LYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI 331 (439)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (439)
++.+.+|.-..-++..+-++.-.|..-++..+.+.+..+..|++-.+..+- ....+.+..++.+..++++..
T Consensus 278 ~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~--------~~l~l~v~s~~~~gll~~m~~ 349 (511)
T TIGR00806 278 YYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW--------SKLLIAVVSAIQAGLVFWMSQ 349 (511)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh--------HHHHHHHHHHHHHHHhhhhhc
Confidence 777777776666554332222445556666677777777788774433211 123555666666777778888
Q ss_pred cCChhHHHHHHHHHHHhhhcccccc-cccccccCCChhhHHHHHHHHHhhhhHHHHHH
Q 013609 332 FRSSNGAIFCSSIALGFLALGRAGF-AVNHMDIAPRYAGIVMGISNTAGTLAGIVGVD 388 (439)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~ 388 (439)
.++.+......++......+..+.. .-+..++..+..|...|+++.+.-+-..+-..
T Consensus 350 t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 350 SHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 8888777766665555544443333 33444455567799999888876665555443
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.95 E-value=9.6e-25 Score=201.31 Aligned_cols=380 Identities=14% Similarity=0.145 Sum_probs=276.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccC-chHHHHHHHHHHHHHHhhhc
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIG-GRKVLLFSFVLWSSTCFWLK 92 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~ 92 (439)
+...+++.+.....+.|.++.+.++.|.|.+|+|.+.+...+...++++++|.++||++ +||.+.++.++.++......
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34556777777888889999999999999999999999999999999999999999985 67788888887777777777
Q ss_pred CCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhh-hhhhhcccCC---chhHH
Q 013609 93 LDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLF-LPSLVKYNGP---NSVFN 168 (439)
Q Consensus 93 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~~~~~w---r~~f~ 168 (439)
..+ +++.+++.-.+..+......|...++.-+..+ ++++-.|-...+.++|..++... ++.+....++ ...++
T Consensus 87 ~~~-~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 87 FSS-SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred Hhc-cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 775 89988888888888888888999999888874 56777888888888998887554 2333333332 34566
Q ss_pred HHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHH
Q 013609 169 AEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTF 248 (439)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (439)
+.+...++..... +.+|+.|++++.+. +.++....+..+++|+|++....+..++.
T Consensus 164 i~~~~~~ll~~~~-l~lp~~~~~~~~~~-----------------------~~~~~~~~~~~~llk~~~~~~Fll~~~l~ 219 (400)
T PF03825_consen 164 IAAILSLLLAGFA-LFLPKTPPKRSAKE-----------------------SVKKLLGLDALKLLKNPRFLVFLLAAFLI 219 (400)
T ss_pred HHHHHHHHHHHHH-HhCCCCccccccCC-----------------------CcccccchHHHHHhcCccHHHHHHHHHHH
Confidence 6555554443333 34566553221111 11122223345899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhh
Q 013609 249 HYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMA 328 (439)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (439)
..+...+..+.+.|+++.-|.+....+.+.++..+..++.-...+++.+|++.++ ++.++.+..++=..+
T Consensus 220 ~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~----------ll~~a~~~~~vR~~l 289 (400)
T PF03825_consen 220 GISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW----------LLLLALVAYAVRWLL 289 (400)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH----------HHHHHHHHHHHHHHH
Confidence 9999999999999999943377778888888888899999999999999999998 889999999888888
Q ss_pred hccc-CChhHHHHHHHH-----HHHhhhcccccccccccccCCChhhHHHHHHHHH-hhhhHHHHHHHHHHhhccccccc
Q 013609 329 LPIF-RSSNGAIFCSSI-----ALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTA-GTLAGIVGVDMTGKLLEAAKTTY 401 (439)
Q Consensus 329 ~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~~ 401 (439)
+... ++.+.......+ +..++...........+..|++.|+++.++++.. ..+|..+|..+.|++.|+.+.++
T Consensus 290 ~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~ 369 (400)
T PF03825_consen 290 YAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARG 369 (400)
T ss_pred HHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh
Confidence 7776 333333333222 3333333333333444456668999999998876 56899999999999999883221
Q ss_pred cCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 402 SDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
.-.|...+.+.+++.++..++..++.|++
T Consensus 370 -----~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 370 -----MFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 11344566666666666666666555554
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.94 E-value=4.2e-24 Score=199.28 Aligned_cols=389 Identities=13% Similarity=0.082 Sum_probs=265.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhccccccccc----ccCchHHHHHH-HHHHHHH
Q 013609 13 LTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQ----KIGGRKVLLFS-FVLWSST 87 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~ 87 (439)
.++...+...+......+..+.+.+++|.+..+.+++..+..+...+.+|+.|+++| |+||||.++++ .....++
T Consensus 8 ~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~ 87 (477)
T TIGR01301 8 RVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFA 87 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHH
Confidence 334444445566677777788888999999999999999999999999999999999 59999998875 6666667
Q ss_pred HhhhcCCcchHH-----------------HHHHHHHHHhhhcccchhhHHHHhhhccCCccc--chhhHHHhhhhhHHHH
Q 013609 88 CFWLKLDPNNVF-----------------ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHER--SRSVSLTTSGMYLGAA 148 (439)
Q Consensus 88 ~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~ 148 (439)
..+.++++ +.+ .++++-.+..++.....+...++++|..|+++| +.+.++.+...++|..
T Consensus 88 l~ll~~~~-~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~i 166 (477)
T TIGR01301 88 VILIGFAA-DIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNV 166 (477)
T ss_pred HHHHHhCc-hhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHH
Confidence 67777775 542 223333344457777888899999999998865 5799999999999999
Q ss_pred HHhhhhhhh--hccc-------------CCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhh
Q 013609 149 MGMLFLPSL--VKYN-------------GPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKV 213 (439)
Q Consensus 149 ~g~~~~~~l--~~~~-------------~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (439)
+|+.+++.. .+.+ +.|..|++.++..++..++..+..||.|...+++.++++..+
T Consensus 167 lg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~---------- 236 (477)
T TIGR01301 167 LGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAP---------- 236 (477)
T ss_pred HHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhccc----------
Confidence 999998865 2211 568899998888888777777777886643211110000000
Q ss_pred hhccccccccccCchHHhhhcc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhCCccccc---------c-hh
Q 013609 214 KVDNGGSAMKAAKIPWKRIVVN-----LPVWAIVVNNFTFHYALYVLMNWLPTYFE-LGLQLSLQEM---------G-SS 277 (439)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~---------~-~~ 277 (439)
.++.+....+++++++ |.++.+++..++.+++++.+..|.+.|+. +.++-++.+. | +-
T Consensus 237 ------~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~ 310 (477)
T TIGR01301 237 ------PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFG 310 (477)
T ss_pred ------ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHH
Confidence 0000111223333332 67899999999999999999999999886 4555433211 1 22
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCC----------------------h
Q 013609 278 KMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRS----------------------S 335 (439)
Q Consensus 278 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~ 335 (439)
.....+...+.+++..++.+|+++|+ .....+.++.++++....+..+ .
T Consensus 311 l~~~s~~~~i~s~~l~~l~~~~g~~k---------~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (477)
T TIGR01301 311 LMLNSVVLGITSIGMEKLCRGWGAGK---------RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKA 381 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccch---------hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHH
Confidence 33445555566777788888887533 1556666666666555543221 1
Q ss_pred hHHHHHHHHHHHhhhcccccccccccccCC--ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhH
Q 013609 336 NGAIFCSSIALGFLALGRAGFAVNHMDIAP--RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAV 413 (439)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (439)
........+++.........+.....+.++ +..|..+|+.|.+..+.+.+.....|.+.+..+ ++...+
T Consensus 382 ~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g---------~~~~~~ 452 (477)
T TIGR01301 382 SALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG---------GGNLPA 452 (477)
T ss_pred HHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC---------CCCeeH
Confidence 122233334444444444445555555664 467999999999999999999999998666653 245667
Q ss_pred HHHHHHHHHHHHHHHHHhccCCc
Q 013609 414 FFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
+.+.++..+++.+..+++.++.+
T Consensus 453 ~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 453 FVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC
Confidence 88888888888877776655543
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=3.6e-24 Score=205.10 Aligned_cols=410 Identities=14% Similarity=0.135 Sum_probs=241.9
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccc-cCchHHHHHHHHHHHHHH
Q 013609 11 VILTFISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK-IGGRKVLLFSFVLWSSTC 88 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~ 88 (439)
+..++...+...+..+.....++. +.+++|.++.+.+++.+.+........+++|+++|| +|||+++..+.++.+++.
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~ 102 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY 102 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 445566666666666666666655 568899999999998888877766667899999999 599999999999999999
Q ss_pred hhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcc--cchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchh
Q 013609 89 FWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHE--RSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSV 166 (439)
Q Consensus 89 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~ 166 (439)
.++++++++.+.+.+.|.++|+|.|...+...+++.|++|+++ |.+++++++.+.++|..+||.+++++.++.|||+.
T Consensus 103 ~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~ 182 (500)
T PRK09584 103 ALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVA 182 (500)
T ss_pred HHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHH
Confidence 9998875356778889999999999999999999999998653 45688999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHH---HHhhhccCCCCCCC-CCCCcccccCccCc-----ccchhhhhcccccc--------------cc
Q 013609 167 FNAEAALGGMWSL---LWFKYATDPPRSEH-PKASAAGFGESLLP-----MRDQKVKVDNGGSA--------------MK 223 (439)
Q Consensus 167 f~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--------------~~ 223 (439)
|++.++...+..+ ......+|.+++.+ ++.|..+....... ..........+..+ .+
T Consensus 183 F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (500)
T PRK09584 183 FALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGK 262 (500)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 9998754444322 22223333221111 11111100000000 00000000000000 00
Q ss_pred ccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhCCccc------ccchhhhhhHHHHHHHHHHHHHH
Q 013609 224 AAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFEL--GLQLSLQ------EMGSSKMMPYLNMFIFSNIGGVV 295 (439)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~------~~~~~~~~~~~~~~~~~~~~g~l 295 (439)
.. ...++.-| ++.+..+. .+.....++......|.++.. ..+.+.. ..+.+.+...+..++..++..++
T Consensus 263 ~~-~~~~~~~~-~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~ 339 (500)
T PRK09584 263 EA-FAMKGAAR-RKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAI 339 (500)
T ss_pred HH-hhcCHHHH-HHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHH
Confidence 00 00011112 22222222 234444555566666666543 1122211 23455566776777777777666
Q ss_pred HHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCC---------h-hHHHHHHHHHHHhhhcccccccccccccCC
Q 013609 296 ADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRS---------S-NGAIFCSSIALGFLALGRAGFAVNHMDIAP 365 (439)
Q Consensus 296 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (439)
-+|.++|.. ......+++++.+++++.+..... . +......+.+.+-....+..........|+
T Consensus 340 ~~~l~~r~~------~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~ 413 (500)
T PRK09584 340 YNKMGDRLP------MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQ 413 (500)
T ss_pred HHHhCcCCC------cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcH
Confidence 666665531 223567777777777766544322 2 233333444444444444445555556667
Q ss_pred ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 013609 366 RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLL 430 (439)
Q Consensus 366 ~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
+.||+++|+......+|..++..+.+....... ..++....+++...|...++..++..++.+.
T Consensus 414 ~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 414 RLMGFIMGSWFLTTAGAALIAGYVANLMAVPDN-VTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 899999997666555555555444432211000 0000001124778888777766544443333
No 101
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.94 E-value=2.7e-24 Score=194.27 Aligned_cols=383 Identities=14% Similarity=0.103 Sum_probs=261.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHh-hCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH--HHH
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAADA-AGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW--SST 87 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~--~~~ 87 (439)
.....+.++..++.....-|..|...++ .|+|.+|+|.+.++..+...+.+|+.|.++||.|.||-++....+. ..+
T Consensus 9 ~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~ 88 (412)
T PF01306_consen 9 YWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFG 88 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHH
Confidence 3445556666777778888888887765 8999999999999999999999999999999999776554433222 222
Q ss_pred Hhh-hcCCc---chH-HHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 88 CFW-LKLDP---NNV-FILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 88 ~~~-~~~~~---~~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
... ..+.| .|. ...+++-...|+......|+.-+++.++. ++.+.-.|-..++.++|.+++..++|.+.+ .+
T Consensus 89 pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~ 165 (412)
T PF01306_consen 89 PFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-IN 165 (412)
T ss_dssp HHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eC
Confidence 222 12221 122 22333334445555566677777776664 556777888899999999999999999987 45
Q ss_pred CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHH
Q 013609 163 PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIV 242 (439)
Q Consensus 163 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (439)
-+..||+....+++..++.++..|+.+++.+..+..++ ++++...++..+++|+|++|.+.
T Consensus 166 p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~l~k~~~fw~~~ 226 (412)
T PF01306_consen 166 PNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGA-------------------KKDKVSLKDVLSLFKMRNFWFFV 226 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS-------------------------HHHHHHHTTSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccccc-------------------CCCCCcHHHHHHHhcchhHHHHH
Confidence 67788887766666555555555554443221111000 11122234457889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh---CCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHH
Q 013609 243 VNNFTFHYALYVLMNWLPTYFELGL---QLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGF 319 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 319 (439)
+........+..+....|.|++..+ +.+....|++.+...+..++...+.+++.+|+|.|+ .+.++.
T Consensus 227 l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~----------~Lllag 296 (412)
T PF01306_consen 227 LFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN----------LLLLAG 296 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH----------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh----------HHHHHH
Confidence 8888888888888888999987633 233455788888889999999999999999999999 888888
Q ss_pred HHHHHHHhhhcccCChhHHHHHHHHHHHhh-hcccccccccccccCCChhhHHHHHH-HHHhhhhHHHHHHHHHHhhccc
Q 013609 320 MVASIALMALPIFRSSNGAIFCSSIALGFL-ALGRAGFAVNHMDIAPRYAGIVMGIS-NTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
.+..+=..+.++.++++.....=.+-..-. ....+..--.....+++..++...+. +...+++..+.+.+.|.++|+.
T Consensus 297 ~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~ 376 (412)
T PF01306_consen 297 VIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI 376 (412)
T ss_dssp HHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc
Confidence 888888888888888776555544433322 23333333344445567788888885 6888999999999999999999
Q ss_pred cccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 398 KTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
|++.+|++++.+.+...++..+..+++|
T Consensus 377 -----------G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 377 -----------GFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred -----------CcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 8999999998888777666666554443
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.93 E-value=4.8e-25 Score=182.59 Aligned_cols=386 Identities=13% Similarity=0.157 Sum_probs=268.3
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccc-cCchHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK-IGGRKVLLFSFVLW 84 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~ 84 (439)
+|...+..+|+..|-+++.....+....+...|.+++.++..++.+.|+....+...++|++.|| +|-|.--++-++..
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 56677777888888888888888898999999999999999999999999999999999999997 58777666666666
Q ss_pred HHHHhhhcCC--cchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 85 SSTCFWLKLD--PNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 85 ~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
.+|.++.+.. .|.+|.++.+|++.|+|.-....+-+++..-|+..||.+.++|+......+|..+--.+.+++.+..+
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 6676655432 14899999999999999888888999999999999999999999999999999888878777776432
Q ss_pred C------c---hhHHHHhHHHHHHHHHHhh---hccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHH
Q 013609 163 P------N---SVFNAEAALGGMWSLLWFK---YATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWK 230 (439)
Q Consensus 163 w------r---~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (439)
= + ...+......+...+.... +.++..++. .+.++. ...+.++. .
T Consensus 201 ~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAeri-lh~e~g--------------------~~Ge~pkL--t 257 (459)
T KOG4686|consen 201 RMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERI-LHLEEG--------------------FLGEEPKL--T 257 (459)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH-HhhhcC--------------------cccCCccc--c
Confidence 0 1 1112222222222221111 111111110 000000 00000110 1
Q ss_pred hhh-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhh
Q 013609 231 RIV-VNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTR 309 (439)
Q Consensus 231 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 309 (439)
+.. -.|.+|.+.+..++.+.+.+.+...-|.++++++|+|+.+++.+.+.....+.+.+++.|.++||+|++-
T Consensus 258 dv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~------ 331 (459)
T KOG4686|consen 258 DVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL------ 331 (459)
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee------
Confidence 111 2478999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHH
Q 013609 310 TRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDM 389 (439)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~ 389 (439)
+....+.+....+-..+.++ .........+++.............+...+|.++.|++.|.++.+.++|-++.|.+
T Consensus 332 ---~wv~~a~~~tl~~H~~l~Ft-~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Ii 407 (459)
T KOG4686|consen 332 ---WWVASACILTLLGHSGLFFT-FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPII 407 (459)
T ss_pred ---hhHHHHHHHHHHHhhhHHhh-hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhh
Confidence 23333333333333333322 11122223333333333322223333344555789999999999999999999999
Q ss_pred HHHhhccccccccCCCCcccchh---HHHHHHHHHHHHHHHHHHhccC
Q 013609 390 TGKLLEAAKTTYSDLSSPESWRA---VFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 390 ~g~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
.|.+.|.. ++|.+ -|+..+.+.+.+..+.+.+.|+
T Consensus 408 ag~i~d~~----------g~y~~le~ffl~~~~~aL~svgil~~~N~k 445 (459)
T KOG4686|consen 408 AGFIADGD----------GSYDNLEAFFLIIGLMALTSVGILFYLNKK 445 (459)
T ss_pred hheeecCC----------CchhhHHHHHHHHHHHHHHHHHHHhheecc
Confidence 99999987 34444 3444555555555555555443
No 103
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.92 E-value=9.6e-23 Score=192.89 Aligned_cols=336 Identities=16% Similarity=0.185 Sum_probs=256.8
Q ss_pred HHHHHHHHhhCCCccchhhhhhhhhhhhhhhccccccccc----ccCchHHHH-HHHHHHHHHHhhhcCC-cc------h
Q 013609 30 IAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQ----KIGGRKVLL-FSFVLWSSTCFWLKLD-PN------N 97 (439)
Q Consensus 30 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~-~~~~~~~~~~~~~~~~-~~------~ 97 (439)
...+.+.+.+|+++...|.+..+..+..++..|+.|.++| |+||||..+ ++.+..+++..++... |. .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4455567778999999999999999999999999999999 899777655 5778888877777765 31 2
Q ss_pred HHHHHHHHHHHhhhcccchhhHHHHhhhccC-CcccchhhHHHhhhhhHHHHHHhhhhhhhhccc-------CCchhHHH
Q 013609 98 VFILVVARLLVGVSQGFIFPSIHTVLAQWVP-PHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN-------GPNSVFNA 169 (439)
Q Consensus 98 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------~wr~~f~~ 169 (439)
...+.+.-++..++.........++..|..+ ++||.+..+.-..+..+|..+...+.+.+.+.. +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3345677777799999999999999999997 578999999999998898876666666655422 69999999
Q ss_pred HhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHH
Q 013609 170 EAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFH 249 (439)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (439)
.+++.++..++..+..+|++++.+++ +++.+.++.+++++|||.++...+..++..
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~------------------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~ 238 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQ------------------------EKKISLRDSLRSLFRNRPFRILLLAFFLQW 238 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccc------------------------ccccccccchhhhcccchHHHHHHHHHHHH
Confidence 99988888888777777722221110 222345566789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhh
Q 013609 250 YALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMAL 329 (439)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (439)
.+........+.|.++..|.+ ...+.+.....+..+++.++.++++||+|+|+ ....+..+.+++.+.+
T Consensus 239 ~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~----------~~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKK----------VYIIGLLLAALGFLLL 307 (428)
T ss_pred hhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHcccee----------ehhhhHHHHHHHHHHH
Confidence 999988889999999988877 45667777888899999999999999999999 8888888888777776
Q ss_pred cccC--ChhHHHHHHHHHHHhhhcccccccccccccCC--------ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccc
Q 013609 330 PIFR--SSNGAIFCSSIALGFLALGRAGFAVNHMDIAP--------RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKT 399 (439)
Q Consensus 330 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~ 399 (439)
.+.+ +.+.......+.....+...........|+.+ ++.|..+|+.+....++..+++.+.+.+.+..+-
T Consensus 308 ~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 308 FFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 6654 44444433333333333333444444444332 3469999999999999999999999999887654
Q ss_pred c
Q 013609 400 T 400 (439)
Q Consensus 400 ~ 400 (439)
.
T Consensus 388 ~ 388 (428)
T PF13347_consen 388 D 388 (428)
T ss_pred C
Confidence 3
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.92 E-value=2e-23 Score=198.28 Aligned_cols=369 Identities=11% Similarity=-0.032 Sum_probs=244.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccC-----chHHHHHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIG-----GRKVLLFSFVL 83 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~ 83 (439)
....++...++..++.........|.+.+++|+|+++++...+...+...+-.+ +|+++||++ ||+.++++.++
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 344555666778887744444555667778999999999999999999999655 999999998 78888888777
Q ss_pred H-HHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhh---HHHhhhhhHHHHHHhhhhhhhhc
Q 013609 84 W-SSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSV---SLTTSGMYLGAAMGMLFLPSLVK 159 (439)
Q Consensus 84 ~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~---~~~~~~~~~g~~~g~~~~~~l~~ 159 (439)
. .+.....+..+++.....+..++.+++.+...++..++..|..+ |++.... ++.....++|..+|+.+++.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 35444455555234444558899999999999999999999998 5554433 33334455899999999999999
Q ss_pred ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHH
Q 013609 160 YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVW 239 (439)
Q Consensus 160 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (439)
.++||..|++.+.+.++..+. ..+.+|++....++.++++.. .. ..... ......++.....++.+++|.++
T Consensus 184 ~~~~~~~f~~~a~l~ll~~~~-~~~~~E~~~~~~~~~~~~~~~-~~-~~~~~-----~~~~~~~~~~~~l~~~l~~~~i~ 255 (468)
T TIGR00788 184 KTLTRILFLITAALLLLQLFV-SNLSKERRAFVRPRIGTYLEM-NM-ALLTL-----GVLANVKVQILGLRGAIQLLEIA 255 (468)
T ss_pred hcCcchHHHHHHHHHHHHHHH-HHhcccccccccccccccchh-hh-hhhhh-----hHHHHHHHHHHHHHHHHhcHHHH
Confidence 999999999998887776433 345566532111110000000 00 00000 00000111122345667888887
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHH
Q 013609 240 AIVVNNFT-FHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVG 318 (439)
Q Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 318 (439)
...+..++ .......... .-.+.++..|+++.+.|......+++.+++..+.+++.+|++.|+ .+.++
T Consensus 256 ~~l~fifl~~~~~~~~~~~-~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~----------~l~~~ 324 (468)
T TIGR00788 256 KPLIFIFLSYANLPGASGS-VFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL----------LFGVT 324 (468)
T ss_pred HHHHHHHHHHhhcCCCCce-eEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH----------HHHHH
Confidence 76555555 2211111111 101233458999999999999999999999999999988888887 77777
Q ss_pred HHHHHHHHhhhccc----------CChhHHH-HHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHH
Q 013609 319 FMVASIALMALPIF----------RSSNGAI-FCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGV 387 (439)
Q Consensus 319 ~~~~~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~ 387 (439)
.++.+++.+..... ++..... ...+...+......+.........+++++|+.+++.+.+.++|..+++
T Consensus 325 ~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~ 404 (468)
T TIGR00788 325 TLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSG 404 (468)
T ss_pred HHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHH
Confidence 77777766443211 1111111 222233333344445555555667778999999999999999999999
Q ss_pred HHHHHhhcccc
Q 013609 388 DMTGKLLEAAK 398 (439)
Q Consensus 388 ~~~g~l~~~~~ 398 (439)
.+.|.+.+..+
T Consensus 405 ~~gg~l~~~~g 415 (468)
T TIGR00788 405 FLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHcC
Confidence 99999998874
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.92 E-value=9.3e-23 Score=193.94 Aligned_cols=357 Identities=13% Similarity=0.019 Sum_probs=229.5
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhH-HHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccc----cCchHH-HH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFS-IAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK----IGGRKV-LL 78 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-l~ 78 (439)
+..+..-+.-.++.+.........+ ...+.+.+++|+|..++|.+.++..+..++..|+.|.++|| +||||. ++
T Consensus 5 ~l~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il 84 (444)
T PRK09669 5 QLTTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLL 84 (444)
T ss_pred cccHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHH
Confidence 3334333344444444343333333 34555778899999999999999999999999999999998 787554 55
Q ss_pred HHHHHHHHHHhhhcCCcc-----hHHHHHHHHHHHhhhcccchhhHHHHhhhcc-CCcccchhhHHHhhhhhHHHHHHhh
Q 013609 79 FSFVLWSSTCFWLKLDPN-----NVFILVVARLLVGVSQGFIFPSIHTVLAQWV-PPHERSRSVSLTTSGMYLGAAMGML 152 (439)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~ 152 (439)
.+.+..++...+....|+ ....+++...+.+.+.........++.+|+. +++||.+..++...+..+|..+++.
T Consensus 85 ~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~ 164 (444)
T PRK09669 85 WFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSV 164 (444)
T ss_pred HHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 676777666655544431 2456666677777777777777889999998 4688999888888888888777766
Q ss_pred hhhhhhc-------ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccccccccc
Q 013609 153 FLPSLVK-------YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAA 225 (439)
Q Consensus 153 ~~~~l~~-------~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (439)
+...+.. ..+|+..+.+.++++.+..+..++..+|++++++ +++.+.
T Consensus 165 ~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~--------------------------~~~~~~ 218 (444)
T PRK09669 165 IALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEV--------------------------DNSSSV 218 (444)
T ss_pred HHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCC--------------------------cCCCCH
Confidence 5443332 3468888888887777766655555555322210 001223
Q ss_pred CchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccc
Q 013609 226 KIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRIL 305 (439)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 305 (439)
.+++++++|||.++......++............+.|.+...+. ++..+.+.....+..+++.++.+++.||+++|+
T Consensus 219 ~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~-- 295 (444)
T PRK09669 219 WKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKFDRVR-- 295 (444)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH--
Confidence 34567889999999888877776666655555555555543332 223334445556777788889999999999888
Q ss_pred chhhhhHHHHHHHHHHHHHHHh-hhcccC-ChhHHHHH-HHHHHHhhhcccccccccccccCC--------ChhhHHHHH
Q 013609 306 SVTRTRKFLNTVGFMVASIALM-ALPIFR-SSNGAIFC-SSIALGFLALGRAGFAVNHMDIAP--------RYAGIVMGI 374 (439)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~ 374 (439)
....+.....+... .....+ +.+..... .+.+.+.. ...+.......|..+ +..|..+|.
T Consensus 296 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~ 366 (444)
T PRK09669 296 --------AFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQN-LTTPLQWSMFSDVVDYEEKRSGRRLDGLVFST 366 (444)
T ss_pred --------HHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhcCcCcchHHHHH
Confidence 55555444433222 222222 22222222 22233333 333444444444322 345778899
Q ss_pred HHHHhhhhHHHHHHHHHHhhccccc
Q 013609 375 SNTAGTLAGIVGVDMTGKLLEAAKT 399 (439)
Q Consensus 375 ~~~~~~~g~~i~~~~~g~l~~~~~~ 399 (439)
.+.+..+|.++++.+.|.+.+..+-
T Consensus 367 ~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 367 NLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999987754
No 106
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.91 E-value=5.9e-22 Score=186.23 Aligned_cols=358 Identities=16% Similarity=0.102 Sum_probs=263.4
Q ss_pred hhhhhhhhhhhhhhhcccccccccccCchHHHHHH-HHHHHHHHhhhcCC-cchHHHHHHHHHHHhhhcccchhhHHHHh
Q 013609 46 KGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFS-FVLWSSTCFWLKLD-PNNVFILVVARLLVGVSQGFIFPSIHTVL 123 (439)
Q Consensus 46 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~-~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 123 (439)
.++..++..+..++..|+.|.++|+-|+||.++.. ..+..+.+.+..+. +++++...+.-++.-++.+.......+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45778888899999999999999999877766554 44444555555553 43666666666777778888899999999
Q ss_pred hhccCCccc--------------------------chhhHHHhhhhhHHHHHHhhhhhhhhc--------ccCCchhHHH
Q 013609 124 AQWVPPHER--------------------------SRSVSLTTSGMYLGAAMGMLFLPSLVK--------YNGPNSVFNA 169 (439)
Q Consensus 124 ~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~--------~~~wr~~f~~ 169 (439)
.|..+++++ ++..+.-.....+|.++...+.-.+.. ..+-|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999999888 899998888888888887776655432 1235888888
Q ss_pred HhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHH
Q 013609 170 EAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFH 249 (439)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (439)
.++.-++..+..+++.||+|+.+..+...+. ....-++....++++.|+|.....++..++..
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~-----------------~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~ 294 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLPSGSSY-----------------LRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYS 294 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcchhH-----------------HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 8888888888888888888763211110000 00111333455677778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHH-HHHHhh
Q 013609 250 YALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVA-SIALMA 328 (439)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 328 (439)
-+...+......|.++++|++..+...+.....+.+++|+.+.+++.||+|.|. ++ .+..+.... .+....
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~-------~~-~l~~~l~~~~~i~~~g 366 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKT-------KR-TLLISLILWIIIPLYG 366 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch-------hH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999993 00 333333322 222222
Q ss_pred hc---c----cCChhHH-HHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccc
Q 013609 329 LP---I----FRSSNGA-IFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTT 400 (439)
Q Consensus 329 ~~---~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~ 400 (439)
+. . ..+.+.. +..++.+...+.........+.+-.||++.+..+|++.......+.+||.+.|.+.+..
T Consensus 367 ~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t--- 443 (477)
T PF11700_consen 367 LFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT--- 443 (477)
T ss_pred HHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 21 0 2233333 33333444444444444455666677788999999999999999999999999999998
Q ss_pred ccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCccC
Q 013609 401 YSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGERIF 438 (439)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
++.+..+....++.+++.++...+..++..+
T Consensus 444 -------g~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 444 -------GSQRYGFLFLLVLFLIGLILLFFVDVEKGRE 474 (477)
T ss_pred -------CCchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence 5789999999999999999888877665543
No 107
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.91 E-value=1.7e-22 Score=181.37 Aligned_cols=276 Identities=12% Similarity=0.075 Sum_probs=202.4
Q ss_pred chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc---------------
Q 013609 96 NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY--------------- 160 (439)
Q Consensus 96 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------------- 160 (439)
++|+.++++-++.|.|.+...+..++++++..|+|++++.+++.+..+++|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~ 87 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAE 87 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHH
Confidence 38999999999999999999999999999999999999999999999999999999999987731
Q ss_pred -cCCchhHHHHhHHHHHHHHHHhhh-ccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhH
Q 013609 161 -NGPNSVFNAEAALGGMWSLLWFKY-ATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPV 238 (439)
Q Consensus 161 -~~wr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (439)
.+||++|++.+.+..+..+++.+. .||.++++. + +. .+ ++. ...++.+++|.+
T Consensus 88 ~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~---~--~~------------------~~-~~~-~~~~~~~~~~~~ 142 (310)
T TIGR01272 88 AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV---A--RV------------------SS-GDT-TQKTSAFQFTHL 142 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc---c--cc------------------cc-ccc-cchhhHHhhHHH
Confidence 479999997777655544443332 222111110 0 00 00 000 111356788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 239 WAIVVNNFTFHYALYVLMNWLPTYFELG--LQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
+...+..++......+...|.+.|+++. +|+++.+.+...+....+.++|+.+.+++.||+++|+ .+.
T Consensus 143 ~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~----------~l~ 212 (310)
T TIGR01272 143 VLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR----------YLA 212 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH----------HHH
Confidence 8888888888888999999999999864 6899999999999999999999999999999999888 666
Q ss_pred HHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcc
Q 013609 317 VGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
.+..+..++.++....+.........+++++.....+.......++ .|++.+++.++. ....+|+++.|.+.|.+.|.
T Consensus 213 ~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~-~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 213 FNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNA-LGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence 6666666665555444443333333344444444443334344444 445566777775 67889999999999999998
Q ss_pred ccccccCCCCcccchhHHHHHHH
Q 013609 397 AKTTYSDLSSPESWRAVFFIPGL 419 (439)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~ 419 (439)
. +.+.++++...
T Consensus 291 ~-----------g~~~a~~v~~~ 302 (310)
T TIGR01272 291 L-----------GIQLAFALPVP 302 (310)
T ss_pred c-----------cchHHHHHHHH
Confidence 7 67777764433
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.91 E-value=2.9e-21 Score=181.11 Aligned_cols=176 Identities=13% Similarity=0.106 Sum_probs=143.8
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhhhhhHHHHHHH-HHhhCCCccchhhhhhhhhhhhhhhccccccccccc-CchHHHH
Q 013609 1 MMNFPKRYLIVILTFISTCVCYIERVGFSIAYTAA-ADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKI-GGRKVLL 78 (439)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~ 78 (439)
|+++.++.+.+..++...+...+..+.+...+|.+ .+++|.++.+.+.+.+.+.....++.+++|+++||+ ||||++.
T Consensus 1 ~~~~~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~il 80 (493)
T PRK15462 1 MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVM 80 (493)
T ss_pred CCccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH
Confidence 45666666777777777777777777777777765 567899999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCc--ccchhhHHHhhhhhHHHHHHhhhhhh
Q 013609 79 FSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPH--ERSRSVSLTTSGMYLGAAMGMLFLPS 156 (439)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~ 156 (439)
++.++..++..+++...++...+.+...+.++|.|...+...++++|.+|++ +|.+++++...+.++|..++|.+.++
T Consensus 81 iG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 81 LGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 9999999998777654212233444444555667777788889999999875 69999999999999999999999999
Q ss_pred hhcccCCchhHHHHhHHHHH
Q 013609 157 LVKYNGPNSVFNAEAALGGM 176 (439)
Q Consensus 157 l~~~~~wr~~f~~~~~~~~~ 176 (439)
+.+..|||+.|.+.++..++
T Consensus 161 L~~~~Gw~~~F~iaaigm~l 180 (493)
T PRK15462 161 AQEEYSWAMGFGLAAVGMIA 180 (493)
T ss_pred HHhhhChHHHHHHHHHHHHH
Confidence 99989999999987654333
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.91 E-value=6.4e-22 Score=188.52 Aligned_cols=352 Identities=12% Similarity=0.051 Sum_probs=220.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHH-HHHHHhhCCCccchhhhhhhhhhhhhhhccccccccccc----CchHHH-HHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAY-TAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKI----GGRKVL-LFSFV 82 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~l-~~~~~ 82 (439)
...+.-.++.+..........+.+ +.+.+++|++..++|.+.+...+..++..++.|+++||. ||||.. ..+.+
T Consensus 8 ~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~ 87 (448)
T PRK09848 8 RTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTA 87 (448)
T ss_pred HHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHH
Confidence 333344445555555554444433 456677899999999999999999999999999999996 777755 44544
Q ss_pred HHHHHHhhh-c----CCcc-hHHHHHHHHHHHhhhcccchhhHHHHhhhccC-CcccchhhHHHhhhhh-----HHHHHH
Q 013609 83 LWSSTCFWL-K----LDPN-NVFILVVARLLVGVSQGFIFPSIHTVLAQWVP-PHERSRSVSLTTSGMY-----LGAAMG 150 (439)
Q Consensus 83 ~~~~~~~~~-~----~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~g~~~g 150 (439)
...+...+. . +.+. .....++.-.+.+++.+...+...++..|..+ +++|.+..++-..+.+ ++..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~ 167 (448)
T PRK09848 88 PLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIG 167 (448)
T ss_pred HHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333332 1 2210 23334455567788888888777787777665 4678887666554433 455556
Q ss_pred hhhhhhhhccc--CCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCch
Q 013609 151 MLFLPSLVKYN--GPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIP 228 (439)
Q Consensus 151 ~~~~~~l~~~~--~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (439)
|.+.+...+.. +|.....+.++++.+..+......||+++++. ++++..+.
T Consensus 168 p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~---------------------------~~~~~~~~ 220 (448)
T PRK09848 168 PSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIV---------------------------AQPSLKIS 220 (448)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCc---------------------------cCCCHHHH
Confidence 65554432111 12111122233333333333333344322110 01122345
Q ss_pred HHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchh
Q 013609 229 WKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVT 308 (439)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 308 (439)
+++++|||.++...+..++............|.|+++.+|.++...+.......++.+++.++.+++.||+++|+
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~----- 295 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN----- 295 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-----
Confidence 678999999999988888888888888888888988888877665555444445677888999999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcccC--ChhHHHH-HHHHHHHhhhcccccccccccccCC--------ChhhHHHHHHHH
Q 013609 309 RTRKFLNTVGFMVASIALMALPIFR--SSNGAIF-CSSIALGFLALGRAGFAVNHMDIAP--------RYAGIVMGISNT 377 (439)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~ 377 (439)
....+.++..++...+.+.+ +.+.... ..+.+.+..... +.......+..+ +++|..+|+.+.
T Consensus 296 -----~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~-~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 296 -----TFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM-TVMWALEADTVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred -----HHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence 77777777666665555433 2222222 222233333322 223333333322 246999999999
Q ss_pred HhhhhHHHHHHHHHHhhcccc
Q 013609 378 AGTLAGIVGVDMTGKLLEAAK 398 (439)
Q Consensus 378 ~~~~g~~i~~~~~g~l~~~~~ 398 (439)
...+|..+++.+.+.+.+..+
T Consensus 370 ~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 370 TRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999987654
No 110
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.90 E-value=7.1e-22 Score=175.32 Aligned_cols=393 Identities=17% Similarity=0.159 Sum_probs=287.7
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHH
Q 013609 2 MNFPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSF 81 (439)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 81 (439)
|..++||.+++..++..+.+.+++..++++.......|+ +.+..-|..-+|++.+....+++-|+.||+|-|...+++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 345789999999999999999999999999999999999 7777889999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCc-----chHH--HHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhh
Q 013609 82 VLWSSTCFWLKLDP-----NNVF--ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFL 154 (439)
Q Consensus 82 ~~~~~~~~~~~~~~-----~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 154 (439)
.+..+|..+-..+. +.++ ....+..+.+.++-........+..-|+|++||..+..+-.++..+|.++|.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 99999998776653 2455 7779999999998888888788899999999999999999999999999999988
Q ss_pred hhhhccc------CCch--hHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccC
Q 013609 155 PSLVKYN------GPNS--VFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAK 226 (439)
Q Consensus 155 ~~l~~~~------~wr~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (439)
..+..+- .|.. .|+....++.+.+++..+..+++|+.+....+.. ..+.+..
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~--------------------~~~~~f~ 256 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAA--------------------LQDASFP 256 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhh--------------------hhcCcHH
Confidence 8877532 4554 3554555555544555555555555442211110 0112345
Q ss_pred chHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccc
Q 013609 227 IPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILS 306 (439)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 306 (439)
...++.++|+++....+.+......+++..+.+-.-+.. .|++...+|++.....+++++++.+.|.+.||.+.-+
T Consensus 257 ~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk--- 332 (480)
T KOG2563|consen 257 KSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK--- 332 (480)
T ss_pred HHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH---
Confidence 667899999999999988888877777777777655555 5788889999999999999999999999999987655
Q ss_pred hhhhhHHHHHHHHHHHHHH-Hhhhcc--cCCh--hHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhh
Q 013609 307 VTRTRKFLNTVGFMVASIA-LMALPI--FRSS--NGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTL 381 (439)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 381 (439)
....+......++ +.+... .... .......+++.+..+..+...-...+...|..-++.+|+.+.++++
T Consensus 333 ------~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~ 406 (480)
T KOG2563|consen 333 ------LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQI 406 (480)
T ss_pred ------HHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhH
Confidence 2333333333333 222221 1122 2223333444444444444445566677898889999999999999
Q ss_pred hHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 382 AGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 382 g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
-+.+-..+.+...+..+.. +.+...-+.+...+++..++..+++
T Consensus 407 f~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~l~~~lva~~r 450 (480)
T KOG2563|consen 407 FGVILVFIMGILAEDLGPP-------GNTFPANIFLTVSALLGAILVAFFR 450 (480)
T ss_pred HHHHHHHHHHHHhhccCCC-------CCCccchhHhHHHHHHHHHHHhhhh
Confidence 9999999999888877211 1233334444455555555544443
No 111
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.90 E-value=2.6e-21 Score=185.16 Aligned_cols=352 Identities=11% Similarity=0.015 Sum_probs=228.7
Q ss_pred HHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhccccccccc----ccCc-hHHHHHHHHHHHHHH
Q 013609 15 FISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQ----KIGG-RKVLLFSFVLWSSTC 88 (439)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~ 88 (439)
.++.+...+....+.+.++. +.+.+|++..++|.+..+.-+..++..|+.|.++| |+|| |+.++.+....+++.
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 34444445555555554444 56667999999999999999999999999999999 6699 455666777777776
Q ss_pred hhhcCCcc-----hHHHHHHHHHHHhhhcccchhhHHHHhhhcc-CCcccchhhHHHhhhhhHHHHHHhhhhhhhhc---
Q 013609 89 FWLKLDPN-----NVFILVVARLLVGVSQGFIFPSIHTVLAQWV-PPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK--- 159 (439)
Q Consensus 89 ~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--- 159 (439)
.++...++ .+..+++.-.+.+++.....+...++..|.. +++||.+..++...+.++|..+.+.+...+.+
T Consensus 92 ~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 92 FLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55543321 1345556667778888888888999999998 58899999998777777776665554433222
Q ss_pred ----ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcc
Q 013609 160 ----YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVN 235 (439)
Q Consensus 160 ----~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (439)
..+|+....+.+++..+..+..++..||++++...+.+. +++.+.++.++.+++|
T Consensus 172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~n 230 (473)
T PRK10429 172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAE---------------------GSHLTLKDIVALIYKN 230 (473)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccc---------------------ccCCCHHHHHHHHhcC
Confidence 235666666666666665555555556643221110000 0112233455667799
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN 315 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 315 (439)
|.++..+...++..........+.+.|.+...+ +....+.+.....+..+++.++.+++.||+|+|+ ..
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~----------~~ 299 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI----------LW 299 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH----------HH
Confidence 999888888888887777777777766665433 4455566666667888999999999999999998 55
Q ss_pred HHHHHHHHHHHhhhcc----cC-ChhHHHHH-HHHHHHhhhcccccccccccccCC--------ChhhHHHHHHHHHhhh
Q 013609 316 TVGFMVASIALMALPI----FR-SSNGAIFC-SSIALGFLALGRAGFAVNHMDIAP--------RYAGIVMGISNTAGTL 381 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~----~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~ 381 (439)
..+..+..++.+.+.. .+ +.+..... .+.+.+.... .........|..+ +..|...|..+.+..+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~-~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~ 378 (473)
T PRK10429 300 AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALF-WVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG 378 (473)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH
Confidence 5555444433332211 12 22222222 2222222222 2333333344321 3457799999999999
Q ss_pred hHHHHHHHHHHhhccccc
Q 013609 382 AGIVGVDMTGKLLEAAKT 399 (439)
Q Consensus 382 g~~i~~~~~g~l~~~~~~ 399 (439)
+..+++.+.|.+.+..+-
T Consensus 379 ~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 379 GSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 999999999999987644
No 112
>PRK11462 putative transporter; Provisional
Probab=99.87 E-value=1.3e-19 Score=172.10 Aligned_cols=358 Identities=13% Similarity=-0.002 Sum_probs=228.9
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhhhhhHH-HHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccc----cCchHH
Q 013609 2 MNFPKRYLIVILTFISTCVCYIERVGFSI-AYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK----IGGRKV 76 (439)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~ 76 (439)
++++.++..-+.-.++.+.........+. ....+.+.+|+++..+|.+..+.-+--++..|+.|.++|| +||||.
T Consensus 2 ~~~~l~~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp 81 (460)
T PRK11462 2 KSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRP 81 (460)
T ss_pred CCCcccHhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcch
Confidence 33333443344444554444444444454 3344667789999999999999999999999999999996 798766
Q ss_pred HH-HHHHHHHHHHhhhcCCcc-----hHHHHHHHHHHHhhhcccchhhHHHHhhhccC-CcccchhhHHHhhhhhHHHHH
Q 013609 77 LL-FSFVLWSSTCFWLKLDPN-----NVFILVVARLLVGVSQGFIFPSIHTVLAQWVP-PHERSRSVSLTTSGMYLGAAM 149 (439)
Q Consensus 77 l~-~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~ 149 (439)
.+ ++.+..+++..++-..|+ ....+.+.-.+..++.......-.++.+|..+ +|||++..++...+..+|..+
T Consensus 82 ~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~ 161 (460)
T PRK11462 82 WVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGML 161 (460)
T ss_pred hHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 55 566777777766654442 14456666677788888888888899999987 789999999999999999888
Q ss_pred Hhhhhhhhhcc-------cCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccc
Q 013609 150 GMLFLPSLVKY-------NGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAM 222 (439)
Q Consensus 150 g~~~~~~l~~~-------~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (439)
++.+...+.+. .+|+....+.+++.+++..+.+...+|+++.+++ +
T Consensus 162 ~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~---------------------------~ 214 (460)
T PRK11462 162 STVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPT---------------------------T 214 (460)
T ss_pred HHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCcc---------------------------C
Confidence 87776554432 3577777777777666655555554554322100 0
Q ss_pred cccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 013609 223 KAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITK 302 (439)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 302 (439)
.+.++.++..++||.++.+....++..............|.+...|.+ ...+.+.....+..+++.++.+++.||+++|
T Consensus 215 ~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk 293 (460)
T PRK11462 215 TSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKV 293 (460)
T ss_pred CCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 112345677889999888777766666666666666666666555543 3344556677788888999999999999888
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHhhhcccCC--hhHHHHH-HHHHHHhhhcccccccccccccCC--------ChhhHH
Q 013609 303 RILSVTRTRKFLNTVGFMVASIALMALPIFRS--SNGAIFC-SSIALGFLALGRAGFAVNHMDIAP--------RYAGIV 371 (439)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 371 (439)
+ ....+.....+..+.+.+.+. ....... ++.+.+. +...+.......|..+ +..|..
T Consensus 294 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~ 362 (460)
T PRK11462 294 T----------IFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLH-QLVTPIQWVMMSDTVDYGEWCNGKRLTGIS 362 (460)
T ss_pred H----------HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHhhhHHhcCCCchHHH
Confidence 7 433222222221222222222 1122222 2222222 2222222333343332 234565
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhcccc
Q 013609 372 MGISNTAGTLAGIVGVDMTGKLLEAAK 398 (439)
Q Consensus 372 ~g~~~~~~~~g~~i~~~~~g~l~~~~~ 398 (439)
.+..+....+|.++++.+.|.+.+..+
T Consensus 363 ~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 363 FAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 677789999999999999999987653
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=5.6e-20 Score=162.63 Aligned_cols=351 Identities=16% Similarity=0.098 Sum_probs=265.2
Q ss_pred chhhhhhhhhhhhhhhcccccccccccCchHH-HHHHHHHHHHHHhhhcCCcc--hHHHHHHHHHHHhhhcccchhhHHH
Q 013609 45 SKGTILSTFYYGYACSQVPGGWAAQKIGGRKV-LLFSFVLWSSTCFWLKLDPN--NVFILVVARLLVGVSQGFIFPSIHT 121 (439)
Q Consensus 45 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~ 121 (439)
..+...++..+..++.+|+.|.++|+.|+||. +.....+..+......+.++ +++..++.-.+..++.........+
T Consensus 59 ~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds 138 (438)
T COG2270 59 YWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh
Confidence 35778889999999999999999999996655 45555666666666777764 4666667778889999999999999
Q ss_pred HhhhccCCcccchhhHHHhhhhhHHHHHHhhhh---hhhh---------------cccCCchhHHHHhHHHHHHHHHHhh
Q 013609 122 VLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFL---PSLV---------------KYNGPNSVFNAEAALGGMWSLLWFK 183 (439)
Q Consensus 122 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~l~---------------~~~~wr~~f~~~~~~~~~~~~~~~~ 183 (439)
++.+..++++-++..++-.....+|..+.-... .... +...=|..+.+.++.-++..+..++
T Consensus 139 ~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~ 218 (438)
T COG2270 139 MLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMIL 218 (438)
T ss_pred HhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHh
Confidence 999999998888887776666666665544442 1111 2334677788888877777777776
Q ss_pred hccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013609 184 YATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYF 263 (439)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (439)
..||.++...+..+. -...-++...+++++.+++.+....++.++..-+.+........|.
T Consensus 219 ~v~~~~~~~~~~~~~-------------------l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg 279 (438)
T COG2270 219 NVHDAEKISSPPPTA-------------------LRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFG 279 (438)
T ss_pred cccccccccccchHH-------------------HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 766655432010000 0012234456678889999999999999999999999999999999
Q ss_pred HHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChh-HHHHHH
Q 013609 264 ELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSN-GAIFCS 342 (439)
Q Consensus 264 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 342 (439)
...+|++..+...+.....+.+++++++.|++.||++.|+ ++..++++..+..+...+..... ..+..+
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~----------vl~~~lvi~~~~~~~~~~~~~~~~f~i~gl 349 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKP----------VLMIGLVILSIAALYLIFLEGELDFWILGL 349 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCce----------eehHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 9889999999999999999999999999999999999998 66666666555554444443333 333445
Q ss_pred HHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHH
Q 013609 343 SIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCI 422 (439)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (439)
+++...++.....-+.....+||++.++.+|+++......+..||.+.+.+.+.+ ++-+..+....++..
T Consensus 350 l~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT----------g~~r~g~~~i~vll~ 419 (438)
T COG2270 350 LVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT----------GSSRAGVLSIIVLLL 419 (438)
T ss_pred HHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh----------cchhhHHHHHHHHHH
Confidence 5555555555555566677788899999999999999999999999999999998 578888888888888
Q ss_pred HHHHHHHHhccC
Q 013609 423 LSSFVFLLFSTG 434 (439)
Q Consensus 423 ~~~~~~~~~~~~ 434 (439)
++.+..+..+.+
T Consensus 420 iGl~~L~~v~~~ 431 (438)
T COG2270 420 IGLLLLLRVKVP 431 (438)
T ss_pred hhHhhEEeecCC
Confidence 888877776644
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.86 E-value=6.6e-19 Score=160.97 Aligned_cols=395 Identities=15% Similarity=0.106 Sum_probs=287.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccc----cCchHHH-HHHH
Q 013609 8 YLIVILTFISTCVCYIERVGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK----IGGRKVL-LFSF 81 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~l-~~~~ 81 (439)
++.-+.-.++-+............+.. +.+.+|+++..+|.+..+--+--++..|+.|.++|| +||+|.. +.+.
T Consensus 11 ~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ 90 (467)
T COG2211 11 LKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGA 90 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHh
Confidence 333444445555555555555554544 566789999999999999999999999999999995 7876654 5566
Q ss_pred HHHHHHHhhhcCCcc-----hHHHHHHHHHHHhhhcccchhhHHHHhhhccC-CcccchhhHHHhhhhhHHHHHHhhhhh
Q 013609 82 VLWSSTCFWLKLDPN-----NVFILVVARLLVGVSQGFIFPSIHTVLAQWVP-PHERSRSVSLTTSGMYLGAAMGMLFLP 155 (439)
Q Consensus 82 ~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~ 155 (439)
+..++.+.++-.+++ +....++.-.+.+++.......-.++.+|..+ ++||.+..++-..+.++|..+...+.+
T Consensus 91 ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~ 170 (467)
T COG2211 91 IPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFP 170 (467)
T ss_pred HHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888877763 56677788888999999999999999999986 689999999999999999776665555
Q ss_pred hhhc-------ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCch
Q 013609 156 SLVK-------YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIP 228 (439)
Q Consensus 156 ~l~~-------~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (439)
.+.. ..||+..-.+.++++.+..+.+++-.+|++.+..+..+ ..+++.++.
T Consensus 171 plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~----------------------~~~~~~~~~ 228 (467)
T COG2211 171 PLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT----------------------GVKLKLKDS 228 (467)
T ss_pred HHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc----------------------cccccHHHH
Confidence 5443 34788888888888888888888887777664322100 112333445
Q ss_pred HHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchh
Q 013609 229 WKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVT 308 (439)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 308 (439)
+..+++||++...++...+...+.+........|.+..+|.+...............+++.++..++.+|+|+|+
T Consensus 229 ~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~----- 303 (467)
T COG2211 229 FLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK----- 303 (467)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH-----
Confidence 567889999999999888888888888888899998888888888888888888888888999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcccCCh--hHHHHHHHHHHHhhhcccccccccccccCC--------ChhhHHHHHHHHH
Q 013609 309 RTRKFLNTVGFMVASIALMALPIFRSS--NGAIFCSSIALGFLALGRAGFAVNHMDIAP--------RYAGIVMGISNTA 378 (439)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~ 378 (439)
+...+.++..++..++.+.+.. ...++..++.....+...+..+....|... +..|...|..+.+
T Consensus 304 -----~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~ 378 (467)
T COG2211 304 -----LFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFF 378 (467)
T ss_pred -----HHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHH
Confidence 8888888888888877776633 233333333334444555566666555432 3468999999999
Q ss_pred hhhhHHHHHHHHHHhhccccccccC----CCCcccchhHHHHH-HHHHHHHHHHHHHhccC
Q 013609 379 GTLAGIVGVDMTGKLLEAAKTTYSD----LSSPESWRAVFFIP-GLLCILSSFVFLLFSTG 434 (439)
Q Consensus 379 ~~~g~~i~~~~~g~l~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 434 (439)
+.+|.+++..+.|++.+..+-.... .....+.+..+.+. +++.+++.+...+++..
T Consensus 379 ~K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~al~gI~~~~~~~Pa~l~l~~~i~~~~y~L~ 439 (467)
T COG2211 379 RKLGLALAGFIPGWILGAIGYVPNVSAQSASALFGIRFLFIILPALLLLLAAIIIFFYKLN 439 (467)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999877543222 22334455555544 44445555555544433
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.84 E-value=2.1e-18 Score=153.26 Aligned_cols=367 Identities=16% Similarity=0.159 Sum_probs=256.7
Q ss_pred HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccC-----chHHHHH-HHHHHHHHHhhhcCC-----c-------c
Q 013609 35 AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIG-----GRKVLLF-SFVLWSSTCFWLKLD-----P-------N 96 (439)
Q Consensus 35 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~-~~~~~~~~~~~~~~~-----~-------~ 96 (439)
+..|++++..-.+...++..+... ..+.+|+.+|+.+ ||..+++ +......+..+.+++ . +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567889988888888888876655 5899999999999 8877655 444444444333221 1 1
Q ss_pred h-HH--HHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHH---
Q 013609 97 N-VF--ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAE--- 170 (439)
Q Consensus 97 ~-~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~--- 170 (439)
. .+ ...+.-.+.|+|.+...+...++++|..|+|+|+++.++.....-+|.+++..+.+.+.+.++-.-..-+.
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 1 22 33445567799999999999999999999999999999999999999999999999998877643333222
Q ss_pred hHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHH
Q 013609 171 AALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHY 250 (439)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (439)
+++.++..++.. +..|++.++..+.+ ++++.+..+.+++++.+|+........++...
T Consensus 165 a~i~~~l~~ia~-wg~E~r~~~~~~~~---------------------~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~ 222 (403)
T PF03209_consen 165 ALIALLLNLIAL-WGQEPRRSRRAAAA---------------------ERPRPPFREAWRQVWASPQARRFFVFLFLGTL 222 (403)
T ss_pred HHHHHHHHHHHH-HhcccCCcccccCC---------------------CCCCccHHHHHHHHHhCCChhHHHHHHHHHHH
Confidence 222222222222 22333322211000 02224445677888899998888888888888
Q ss_pred HHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHH-hhhccccchhhhhHHHHHHHHHHHHHHHhhh
Q 013609 251 ALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADH-LITKRILSVTRTRKFLNTVGFMVASIALMAL 329 (439)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (439)
+++.=...+-.|--+++|+++.+...+......+..++....+++..| .++++ ....++..++.++.++
T Consensus 223 a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~----------~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 223 AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKR----------TAALGCLLGALAFALI 292 (403)
T ss_pred HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH----------HHHHHHHHHHHHHHHH
Confidence 888888888889999999999999999999999999999999988763 33333 4455555555555443
Q ss_pred cc---cCChhH-HHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCC
Q 013609 330 PI---FRSSNG-AIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLS 405 (439)
Q Consensus 330 ~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~ 405 (439)
.. ..+.+. ....++++++.+.+........+.-..+++.|..+|.-...+.++..++..+.|.+.|....-..+ +
T Consensus 293 i~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~-~ 371 (403)
T PF03209_consen 293 ILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN-S 371 (403)
T ss_pred HHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-C
Confidence 33 333333 333444555555555555666666667789999999999999999999999999999865322111 1
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 406 SPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
...+|..+|.+-++..+++..+...+.+++
T Consensus 372 ~~~aY~~VF~lEa~ll~~a~~ll~~l~~~~ 401 (403)
T PF03209_consen 372 PALAYGVVFALEAVLLLAALVLLGRLDRRE 401 (403)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 335788999998888888887776665554
No 116
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.82 E-value=6.6e-22 Score=188.48 Aligned_cols=379 Identities=13% Similarity=0.117 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc
Q 013609 13 LTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK 92 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 92 (439)
.+++..+........+...++.+.+.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.++++++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 34455555567777788889999999999999999999999999999999999999998888999999999999988876
Q ss_pred CCcc--------------------------------------------------hHHHHHHHHHHHhhhcccchhhHHHH
Q 013609 93 LDPN--------------------------------------------------NVFILVVARLLVGVSQGFIFPSIHTV 122 (439)
Q Consensus 93 ~~~~--------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~ 122 (439)
+- | -+..++++.++.|+|....++...+|
T Consensus 87 lP-hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 87 LP-HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred cc-HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 52 1 14578899999999999999999999
Q ss_pred hhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc---------------------cC-CchhHHHHhHHHHHHHHH
Q 013609 123 LAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY---------------------NG-PNSVFNAEAALGGMWSLL 180 (439)
Q Consensus 123 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------------~~-wr~~f~~~~~~~~~~~~~ 180 (439)
+-|..++++-+..+|+..+...+|.++|..+++.+.+. .| |-..|++.+.+.++..+.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999877641 11 555566677777776666
Q ss_pred HhhhccCCCCCCCCCCCcccccCccCcccchhhhhcc----ccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHH
Q 013609 181 WFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDN----GGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLM 256 (439)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (439)
.+.++++-|+..+.+...+...++..+..++...+.+ .....++.....+++++||.+....+..........++.
T Consensus 246 l~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~ 325 (539)
T PF03137_consen 246 LFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFA 325 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 6666665555521111111111000000000000000 112234455666889999999999999999999999999
Q ss_pred HHHHHHHHHhhCCcccccchhhhhhHH-HHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHH-Hhhhcc--c
Q 013609 257 NWLPTYFELGLQLSLQEMGSSKMMPYL-NMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIA-LMALPI--F 332 (439)
Q Consensus 257 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~ 332 (439)
++.|.|++.+++.++.+++.+.....+ +..+|.+++|++.+|++-+.. ...+....... +..+. ...+.. .
T Consensus 326 tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~----~~~~~~~v~~~-v~~~~~~~~~~~~C~ 400 (539)
T PF03137_consen 326 TFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSAR----GAAKFCIVVSI-VSVILYSPLFFLGCP 400 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHH----HHHHHHHHHHH-HHHHHHHHHHeecCC
Confidence 999999999999999999888766554 677888999999998865441 11111122211 11111 111100 0
Q ss_pred ---------CC----------------------------------h-----hHHHHHHHH-HHHhhhccccccccccccc
Q 013609 333 ---------RS----------------------------------S-----NGAIFCSSI-ALGFLALGRAGFAVNHMDI 363 (439)
Q Consensus 333 ---------~~----------------------------------~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 363 (439)
+. . ...++...+ .+.......+........+
T Consensus 401 ~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V 480 (539)
T PF03137_consen 401 NPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCV 480 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccC
Confidence 00 0 001111111 1112233455566677788
Q ss_pred CCChhhHHHHHHHHHhhh-hHHHHHHHHHHhhccc
Q 013609 364 APRYAGIVMGISNTAGTL-AGIVGVDMTGKLLEAA 397 (439)
Q Consensus 364 ~~~~~~~~~g~~~~~~~~-g~~i~~~~~g~l~~~~ 397 (439)
++|+|+.+.|+...+.++ |.+-+|.++|.+.|..
T Consensus 481 ~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 481 PPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -----------------------------------
T ss_pred ChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 899999999999877665 6788999999999965
No 117
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.81 E-value=2e-18 Score=158.10 Aligned_cols=390 Identities=16% Similarity=0.196 Sum_probs=253.1
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHh--hCCCccchhhhhhhhhhhhhhhcccccccccccCc-hHHHHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADA--AGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGG-RKVLLFS 80 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~ 80 (439)
++.+|+.+.+..+..++...+.+.+.+..-+..++ .+.+.+..|++.++..++.+++.+.+|....|.++ |+.++.+
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s 108 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS 108 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence 46788899999999999999998888877777777 56677788999999999999999999999999987 8899999
Q ss_pred HHHHHHHHhhh-cC--Ccc-hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhh
Q 013609 81 FVLWSSTCFWL-KL--DPN-NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPS 156 (439)
Q Consensus 81 ~~~~~~~~~~~-~~--~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 156 (439)
.++..+++++. ++ .++ .-+.++++|++.|+|.+ ......+++++....++|.|+++....+..+|..+||.+...
T Consensus 109 ~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 109 FLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 99999999887 22 233 67899999999999988 568899999999889999999999999999999999988776
Q ss_pred hhcc--cC-----------CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccccccc
Q 013609 157 LVKY--NG-----------PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMK 223 (439)
Q Consensus 157 l~~~--~~-----------wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (439)
+... -| ...+-|+.+++.++..++...+.+|.+++..++...++.++ ..+.++.+
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~------------~~~~~~~~ 255 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEE------------KSDIEKVK 255 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhh------------ccchhhhc
Confidence 6531 11 23566788888888777777777787766533322111000 00001111
Q ss_pred ccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchh----hhhhHHHHHHHHHHHHHHH-HH
Q 013609 224 AAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSS----KMMPYLNMFIFSNIGGVVA-DH 298 (439)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~g~l~-d~ 298 (439)
.++.++ +..+.+.+..+...+......+..+.+....++.+.+++... .+..++....-.+...... .+
T Consensus 256 ~~~~d~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~ 329 (488)
T KOG2325|consen 256 KPKLDW------VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGK 329 (488)
T ss_pred cCChhH------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 122221 223344455555555555556666666666677776665433 2232222222222222221 12
Q ss_pred hhhccccchhhhhHHHHHHHHHHHHHHH--hhhccc--C------C----------hh--------HHHHHHHHHHHhhh
Q 013609 299 LITKRILSVTRTRKFLNTVGFMVASIAL--MALPIF--R------S----------SN--------GAIFCSSIALGFLA 350 (439)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~------~----------~~--------~~~~~~~~~~~~~~ 350 (439)
+.+|+ .+..+........ ...++. . + .. ......+......+
T Consensus 330 i~~r~----------~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g 399 (488)
T KOG2325|consen 330 IDKRR----------IILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFG 399 (488)
T ss_pred hccce----------eeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheec
Confidence 22233 2233322222222 222111 0 0 00 00111111111112
Q ss_pred cccc-----cccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHH
Q 013609 351 LGRA-----GFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSS 425 (439)
Q Consensus 351 ~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (439)
...| ....+.+.+.|+++++..|.+......+..++|.+........ |++..+.+..+..++..
T Consensus 400 ~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~-----------g~~~v~~~~~~~~l~~~ 468 (488)
T KOG2325|consen 400 IAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS-----------GPRPVWIILLCLLLVVA 468 (488)
T ss_pred cccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc-----------CccHHHHHHHHHHHHHH
Confidence 2222 3345566678899999999999999999999999999999888 88888887777666665
Q ss_pred HHHHHhcc
Q 013609 426 FVFLLFST 433 (439)
Q Consensus 426 ~~~~~~~~ 433 (439)
.++....+
T Consensus 469 ~l~~~~~~ 476 (488)
T KOG2325|consen 469 ALWIVFLK 476 (488)
T ss_pred HHHHHHHH
Confidence 55544433
No 118
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.79 E-value=1e-17 Score=159.62 Aligned_cols=292 Identities=16% Similarity=0.143 Sum_probs=227.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTC 88 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 88 (439)
..+.++++..+...+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+...|.-|-|.+-++++++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 34566777778888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCC--------------------c---------------------------c-h--HH-HHHHHHHHHhhhcccchh
Q 013609 89 FWLKLD--------------------P---------------------------N-N--VF-ILVVARLLVGVSQGFIFP 117 (439)
Q Consensus 89 ~~~~~~--------------------~---------------------------~-~--~~-~l~~~r~l~G~~~~~~~~ 117 (439)
+++++- + + + ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 988763 0 0 0 22 677889999999999999
Q ss_pred hHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc-------------------CCchhHHHHhHHHHHHH
Q 013609 118 SIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN-------------------GPNSVFNAEAALGGMWS 178 (439)
Q Consensus 118 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------------------~wr~~f~~~~~~~~~~~ 178 (439)
...+|+-|...+++-+..+|+......+|.++|.++++++.+.+ -|..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876511 15556777777777777
Q ss_pred HHHhhhccCCCCCCCCCCCcc-cccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 013609 179 LLWFKYATDPPRSEHPKASAA-GFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMN 257 (439)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (439)
+..+++.++.|+..+++...+ +..+.+.+ .........++-++.....+++++||.+....+...+....+.++.+
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t 413 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESG---GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT 413 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccc---cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH
Confidence 777777666665543211110 00000000 00000000012234455678899999999999999999999999999
Q ss_pred HHHHHHHHhhCCcccccchhhhhhHH-HHHHHHHHHHHHHHHhhhcc
Q 013609 258 WLPTYFELGLQLSLQEMGSSKMMPYL-NMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 258 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~ 303 (439)
++|.|+++.+|.++..+..+....++ +..+|..++|++.+|+..+.
T Consensus 414 FlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 414 FLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred hhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence 99999999999999999888765554 55667788899998876554
No 119
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.77 E-value=4.1e-17 Score=151.83 Aligned_cols=364 Identities=16% Similarity=0.116 Sum_probs=258.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCcc-chhhhhhhh----hhhhhhhcccccccccccCchHHHHHHHH
Q 013609 8 YLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQS-SKGTILSTF----YYGYACSQVPGGWAAQKIGGRKVLLFSFV 82 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~-~~g~~~s~~----~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 82 (439)
+.......+-.+...+.........+.....++.+.. +.+...... .+...+.++..|.++||+|||..+.+..+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3444555566666666666666666666665554332 233333333 56778899999999999999999999999
Q ss_pred HHHHHHhhhcCCcchHHHHHHHHHHHhhhc--ccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc
Q 013609 83 LWSSTCFWLKLDPNNVFILVVARLLVGVSQ--GFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY 160 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~--~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 160 (439)
...+......+. .+|.++ +.|+.. +.......++++|....++|...+++.+.....+..++|.+++.+.+.
T Consensus 101 ~~~l~~~~~~~~--~~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~ 174 (463)
T KOG2816|consen 101 GTILPALCLLFQ--GYWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF 174 (463)
T ss_pred HHHHhHHHHHHH--HHHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 988888877775 355544 444332 345678888999999999999999999999999999999999999999
Q ss_pred cCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCC-CcccccCccCcccchhhhhccccccccccCchHHhhhcchhHH
Q 013609 161 NGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKA-SAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVW 239 (439)
Q Consensus 161 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (439)
.|.-..|.+..+..++..+....+.||+..+++++. +..+.. ...... .+..+........-.+|..+
T Consensus 175 ~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~r~~l 243 (463)
T KOG2816|consen 175 LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELT-PGSLDS----------SHVADAFQSLTKVGPDRLLL 243 (463)
T ss_pred cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccC-CCcccc----------hhhhhhhhhhcccCCCccch
Confidence 999999999999999888888888888766654331 100000 000000 00011111111222345555
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHH-HHHHHhhhccccchhhhhHHHHHH
Q 013609 240 AIVVNNFTFHYALYVLMN-WLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGG-VVADHLITKRILSVTRTRKFLNTV 317 (439)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~ 317 (439)
.+++..+........-.. ..+.|++..+++++.+.+.+.+.......++..+.. .+...++.++ ....
T Consensus 244 ~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~----------~i~l 313 (463)
T KOG2816|consen 244 LLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR----------LISL 313 (463)
T ss_pred HHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----------HhhH
Confidence 555555544444332222 446777888999999999888888888989987776 6677777777 8899
Q ss_pred HHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 318 GFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
|+..-.+....+.+..+.+.......+........+.........+.++++|++.++...+..+.+.++|.+.+.+...+
T Consensus 314 Gl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 314 GLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999999998888877776666555555444444444555566677899999999999999999999999999997765
Q ss_pred c
Q 013609 398 K 398 (439)
Q Consensus 398 ~ 398 (439)
.
T Consensus 394 ~ 394 (463)
T KOG2816|consen 394 L 394 (463)
T ss_pred H
Confidence 3
No 120
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.75 E-value=1.1e-15 Score=138.71 Aligned_cols=411 Identities=14% Similarity=0.132 Sum_probs=242.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHH-HHHHhhC----CCccchhhhhhhhhhhhhhhccccccccccc-CchHHHHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYT-AAADAAG----VNQSSKGTILSTFYYGYACSQVPGGWAAQKI-GGRKVLLFSFV 82 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~----~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~ 82 (439)
+.+..++..-+...++.+.+...+. .+..+++ .|+++..-+.+.|..-.-+...++|+++||+ |+|+++..+.+
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 3455566667777776666655444 4556666 9999988888888888888999999999996 99999999999
Q ss_pred HHHHHHhhhcCCc-chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCc--ccchhhHHHhhhhhHHHHHHhhhhhhhhc
Q 013609 83 LWSSTCFWLKLDP-NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPH--ERSRSVSLTTSGMYLGAAMGMLFLPSLVK 159 (439)
Q Consensus 83 ~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 159 (439)
++.+|-++.+.++ .+...+.++-.+.++|.|..=+...+++.|.+|++ +|-..++++.++.++|..++|.+.+++.+
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999998883 36888899999999999999999999999999865 47888999999999999999999999999
Q ss_pred ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccC-ccCcccc------------hhhhhcccc-------
Q 013609 160 YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGE-SLLPMRD------------QKVKVDNGG------- 219 (439)
Q Consensus 160 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~~~------- 219 (439)
..||+..|-..++-..+.++..+ ..+..-.....+.+..+... ....... ....+....
T Consensus 181 ~~g~~~gF~~aavGm~~gl~~f~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 259 (498)
T COG3104 181 NYGWHVGFGLAAVGMIIGLVIFL-LGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVIS 259 (498)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHH-HccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999887766555444333 33222111111111110000 0000000 000000000
Q ss_pred ----c--cccccCchHHhhhcchhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHh-----hCCcccccchhhhhhHHHH
Q 013609 220 ----S--AMKAAKIPWKRIVVNLPVW---AIVVNNFTFHYALYVLMNWLPTYFELG-----LQLSLQEMGSSKMMPYLNM 285 (439)
Q Consensus 220 ----~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~ 285 (439)
. -.+....+-.+ -.+++.+ .+.+.....+..+....+.+..|..+. +|+ .-..++..+...+.-
T Consensus 260 i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~-~vp~~~fQslNp~~I 337 (498)
T COG3104 260 ILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGF-EVPPAWFQSLNPFFI 337 (498)
T ss_pred HHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccce-ecCHHHHHhhCHHHH
Confidence 0 00000000000 0011222 222223333333333334444444332 222 123457778888888
Q ss_pred HHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc-------C---ChhH-HHHHHHHHHHhhhcccc
Q 013609 286 FIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIF-------R---SSNG-AIFCSSIALGFLALGRA 354 (439)
Q Consensus 286 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~-~~~~~~~~~~~~~~~~~ 354 (439)
++.+++..++-.|.++++. ...... =..+++.+++.+++.+... . +.++ ....++..++-....+.
T Consensus 338 ii~~pI~a~l~~~l~~~~~-~ps~~~--KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpv 414 (498)
T COG3104 338 ILFSPILAALWTKLGRGNK-QPSTPI--KFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPV 414 (498)
T ss_pred HHHHHHHHHHHhHhhcCCC-CCCcch--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHH
Confidence 8888888888888666541 111111 2334444444444443322 1 1222 22333334444444444
Q ss_pred cccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 013609 355 GFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLL 430 (439)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
.........|+...+..+++.......+..++..+.+.-.+ . .+.++.......|..++...++.....+.
T Consensus 415 GLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~----~~~~~~~~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 415 GLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-T----DPAYTAFIEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccc-c----chhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 55556666666778888887777666666666655553111 0 01112235566777777776655555443
No 121
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.68 E-value=2e-15 Score=141.78 Aligned_cols=385 Identities=15% Similarity=0.120 Sum_probs=230.5
Q ss_pred hHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccC-----chHHHHHHHHHHHHHHhhhcCCcc---hHH
Q 013609 28 FSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIG-----GRKVLLFSFVLWSSTCFWLKLDPN---NVF 99 (439)
Q Consensus 28 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~~~~---~~~ 99 (439)
..+..|.+.+++|+++++.....+...+... ..++.|.++|.+- ||+-++++.++.+++....+..++ +..
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 4466778899999999999888887777665 4688899999863 556666677777555555555432 567
Q ss_pred HHHHHHHHHhhhcccchhhHHHHhhhccC--CcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHH
Q 013609 100 ILVVARLLVGVSQGFIFPSIHTVLAQWVP--PHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMW 177 (439)
Q Consensus 100 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~ 177 (439)
...+.-++..+|.......+.+++.|... +++||...+.......+|.+++..++|.+.+..++|..|.+.+++..+.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 77777788889999999999999999984 3447788888899999999999999999999999999999998888777
Q ss_pred HHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHH-HHHHHHHHHHHHH
Q 013609 178 SLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVV-NNFTFHYALYVLM 256 (439)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 256 (439)
.+..++..+|+++.... +..+..++..+.. ....++.....++.+++|.+|...+ ..++.......-.
T Consensus 168 ~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 236 (433)
T PF03092_consen 168 LIVALFLLEERKVRPAD--EVFSFGKEEVPCL---------FGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISS 236 (433)
T ss_pred HHHHHHhhhhccccccc--hhhcccccccchh---------hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCC
Confidence 66666666662222211 0000000000000 0002333445567777888877665 2222211111100
Q ss_pred HHHHHHHHHhhC---CcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhh-hccc
Q 013609 257 NWLPTYFELGLQ---LSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMA-LPIF 332 (439)
Q Consensus 257 ~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 332 (439)
...-.+..+..+ +|+...+.+..+..++.+++..+..+...+..-|+ +.....++..+..+. +...
T Consensus 237 a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~----------~~~~t~~~~~~~~l~~~~lv 306 (433)
T PF03092_consen 237 ASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRR----------IFVVTTLVSVLASLFDLLLV 306 (433)
T ss_pred ccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH----------HHHHHHHHHHHHhcccEEEE
Confidence 100011122344 66666666555545555555554444333333333 334444333332221 1111
Q ss_pred ---------CChhHHHHH-HHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccccc
Q 013609 333 ---------RSSNGAIFC-SSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYS 402 (439)
Q Consensus 333 ---------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 402 (439)
++.+..+.- .+..........|......+..|+...|+.+++..++.++|..++..+...+.+..+-...
T Consensus 307 ~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~ 386 (433)
T PF03092_consen 307 TRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRD 386 (433)
T ss_pred EEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 111111111 1122222222234444555566778899999999999999999999999998887752221
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 013609 403 DLSSPESWRAVFFIPGLLCILSSFVFLLFSTGERI 437 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
+ ..+.....++..++.++...+..++++++|+
T Consensus 387 ~---f~~l~~lili~~~~~ll~l~ll~lLp~~~~~ 418 (433)
T PF03092_consen 387 D---FSNLWLLILICSVIQLLPLPLLFLLPPQKRI 418 (433)
T ss_pred c---ccchHHHHHHHHHHHHHHHHHHHHcCCCchh
Confidence 1 1234444555566666666666666665443
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.68 E-value=1.4e-16 Score=126.30 Aligned_cols=139 Identities=22% Similarity=0.342 Sum_probs=126.1
Q ss_pred hhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhcc
Q 013609 48 TILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWV 127 (439)
Q Consensus 48 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 127 (439)
++.+.+.++..++.++.|++.||+|||+.+..+.....++.+.....+ +++.+.+.+++.|++.+...+...+++.|.+
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS-NITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 456677889999999999999999999999999999999998888886 8999999999999999999999999999999
Q ss_pred CCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccC
Q 013609 128 PPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATD 187 (439)
Q Consensus 128 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 187 (439)
|+++|++..++.+....+|..+++.+.+.+.+..+|++.+++.+...++..+...+..||
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999998999999999888877776666666554
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.65 E-value=1.3e-15 Score=143.30 Aligned_cols=165 Identities=16% Similarity=0.156 Sum_probs=137.7
Q ss_pred hhhHHHHHHHHHhhCCCc--------cchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcc-
Q 013609 26 VGFSIAYTAAADAAGVNQ--------SSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPN- 96 (439)
Q Consensus 26 ~~~~~~~~~i~~~~~~s~--------~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~- 96 (439)
.......+...++.+.++ ++.+...++..+...++.++.|+++||+|||+++..+.++.+++..+......
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~ 304 (418)
T TIGR00889 225 QITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPE 304 (418)
T ss_pred HHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 334455566666766543 56699999999999999999999999999999999999999888766655321
Q ss_pred --hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHh-hhhhHHHHHHhhhhhhhhcc------cCCchhH
Q 013609 97 --NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTT-SGMYLGAAMGMLFLPSLVKY------NGPNSVF 167 (439)
Q Consensus 97 --~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~------~~wr~~f 167 (439)
+++.+++.+++.|++.+...+....++.|++|+++|++++|+.+ ...++|..+||.++|.+.++ +||+..|
T Consensus 305 ~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f 384 (418)
T TIGR00889 305 YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMW 384 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHH
Confidence 24667788999999999888999999999999999999999997 67899999999999999886 5699999
Q ss_pred HHHhHHHHHHHHHHhhhccCCCC
Q 013609 168 NAEAALGGMWSLLWFKYATDPPR 190 (439)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~ 190 (439)
.+.+++.++..++.+++.+|+.+
T Consensus 385 ~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 385 LFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHHHHHhCCccc
Confidence 99999888888888888876633
No 124
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.64 E-value=1.6e-14 Score=126.69 Aligned_cols=245 Identities=17% Similarity=0.180 Sum_probs=172.9
Q ss_pred hhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHH
Q 013609 26 VGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVAR 105 (439)
Q Consensus 26 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r 105 (439)
..-+|..-.+-+++|.++.|++.+.........+..++.|.++||+|||+.-++.+++++++++.- ..+ +++.++++|
T Consensus 51 WLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~-~~~~L~~GR 128 (354)
T PF05631_consen 51 WLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSS-NYPVLLLGR 128 (354)
T ss_pred HhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hcc-ccHHHHHHH
Confidence 344555555667899999999999999999999999999999999999999999999999999754 445 899999999
Q ss_pred HHHhhhcccchhhHHHHh-hhccC----CcccchhhHHHh-hhhhHHHHHHhhhhhhhhcccC--CchhHHHHhHHHHHH
Q 013609 106 LLVGVSQGFIFPSIHTVL-AQWVP----PHERSRSVSLTT-SGMYLGAAMGMLFLPSLVKYNG--PNSVFNAEAALGGMW 177 (439)
Q Consensus 106 ~l~G~~~~~~~~~~~~~i-~~~~~----~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~--wr~~f~~~~~~~~~~ 177 (439)
++.|++.+....+--++. .|.-. ++..+..++... ..+++-.+.+..++..+.+..+ -..+|....++.++.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 999999999888888875 45432 222233333333 2333444555556666666554 478888887777776
Q ss_pred HHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHH-
Q 013609 178 SLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLM- 256 (439)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 256 (439)
.+++...-+|...+..++. +..++..+.++.+.+||+++.+.++..+...+++.+.
T Consensus 209 ~~~I~~~W~ENyg~~~~~~-----------------------~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVf 265 (354)
T PF05631_consen 209 AVLILKTWPENYGDTSSSS-----------------------SLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVF 265 (354)
T ss_pred HHHHHhcccccCCCccccc-----------------------chHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHhee
Confidence 6666555455443321110 1112333456678889999999999999988888776
Q ss_pred HHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHH
Q 013609 257 NWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADH 298 (439)
Q Consensus 257 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 298 (439)
.|.|..- . +-+...-|++++...++.++|+.+..++..|
T Consensus 266 lWtPaL~-~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 266 LWTPALD-P--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred eeeceec-C--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4455443 1 1123346888998889999998888665543
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.64 E-value=1.5e-15 Score=143.77 Aligned_cols=153 Identities=10% Similarity=0.046 Sum_probs=132.8
Q ss_pred hhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchh
Q 013609 38 AAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFP 117 (439)
Q Consensus 38 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 117 (439)
+.+.+..+.|++.++..++..++.+++|++.||+|||+.+..+.++.+++..+.++++ +.+.+++.+++.|++.+...+
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~-~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT-GPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHH
Confidence 3456667889999999999999999999999999999999999999999888888886 899999999999999888788
Q ss_pred hHHHHhhhccCCcccchhhHH-HhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCC
Q 013609 118 SIHTVLAQWVPPHERSRSVSL-TTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRS 191 (439)
Q Consensus 118 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 191 (439)
....++.|.+|++.|+...+. .+....+|..+++.+.|++.+..|||..|.+.+++.++..++.++..++++++
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 409 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDREL 409 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCchh
Confidence 888999999999999887665 66778899999999999999999999999998888877666666666555444
No 126
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.64 E-value=4.2e-15 Score=143.18 Aligned_cols=171 Identities=11% Similarity=0.011 Sum_probs=127.5
Q ss_pred HHhhhhhHHHHHHHH-HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh---hcCCcch
Q 013609 22 YIERVGFSIAYTAAA-DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW---LKLDPNN 97 (439)
Q Consensus 22 ~~~~~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~ 97 (439)
....+......|.+. +++|.+..+.++..+...++..++.+..|+++||+|||+++..+.++..++... ...++ +
T Consensus 263 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~-~ 341 (490)
T PRK10642 263 NVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN-V 341 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 334444555667654 567888888888888889999999999999999999999988877654433322 22343 6
Q ss_pred HHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc-CCchhHHHHhHHHHH
Q 013609 98 VFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN-GPNSVFNAEAALGGM 176 (439)
Q Consensus 98 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~ 176 (439)
...++++|++.|++.+........++.|.+|++.|+++++.......++..++|.+.+++.+.. +|+.++++..+++++
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i 421 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVI 421 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 7888889999998877777778888999999999999999755545566778888888887754 478777776666665
Q ss_pred HHHHHhhhccCCCCCCCC
Q 013609 177 WSLLWFKYATDPPRSEHP 194 (439)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~ 194 (439)
..+..+ +.||+|++..+
T Consensus 422 ~~~~~~-~~pes~~~~~~ 438 (490)
T PRK10642 422 GLITGV-TMKETANRPLK 438 (490)
T ss_pred HHHHHH-HhccccCCCCC
Confidence 555444 55898887543
No 127
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.59 E-value=2.1e-14 Score=139.09 Aligned_cols=150 Identities=13% Similarity=0.109 Sum_probs=119.1
Q ss_pred hhHHHHHHHH-HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCc-chHHHHHHH
Q 013609 27 GFSIAYTAAA-DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDP-NNVFILVVA 104 (439)
Q Consensus 27 ~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~ 104 (439)
.....+|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+..+..+..+...... .+.+.+.+.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLL 372 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence 3456677766 58999999999999999999999999999999999999999888777666655443332 144455555
Q ss_pred HHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHH
Q 013609 105 RLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGM 176 (439)
Q Consensus 105 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~ 176 (439)
.++.+.......+...+++.|.+|+++|++.+++......+|..+||.+++.+.+.+||+..+...+....+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 555544433455677788999999999999999999999999999999999999999999888666554433
No 128
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.57 E-value=3.6e-14 Score=133.48 Aligned_cols=161 Identities=18% Similarity=0.223 Sum_probs=134.4
Q ss_pred hhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHH
Q 013609 26 VGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVAR 105 (439)
Q Consensus 26 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r 105 (439)
.......|.+.++.|. ++.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++..+..+.+ +.+.+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 309 (399)
T PRK05122 233 GTIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP-SPWMALIGA 309 (399)
T ss_pred HHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHH
Confidence 3344455555556665 3456777888899999999999999999999999999888888888888876 888888999
Q ss_pred HHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhc
Q 013609 106 LLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYA 185 (439)
Q Consensus 106 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 185 (439)
++.|++.+...+.......|..|+++|+++.++.+....+|..+++.+.+.+.+..||+..|++.+...++..+...+..
T Consensus 310 ~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 310 ALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999888888888889999999999999999999999999999999999999999999998888777666655554
Q ss_pred cCCC
Q 013609 186 TDPP 189 (439)
Q Consensus 186 ~~~~ 189 (439)
+++|
T Consensus 390 ~~~~ 393 (399)
T PRK05122 390 RRAP 393 (399)
T ss_pred cccc
Confidence 4333
No 129
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.56 E-value=5.8e-14 Score=132.54 Aligned_cols=161 Identities=19% Similarity=0.159 Sum_probs=134.1
Q ss_pred hhhHHHHHHHHHhhCCCccc----hhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHH
Q 013609 26 VGFSIAYTAAADAAGVNQSS----KGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFIL 101 (439)
Q Consensus 26 ~~~~~~~~~i~~~~~~s~~~----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l 101 (439)
....+..+.+.++.+.+..+ .+.+.+.+.++..++.+..|+++||+|||+.+..+..+..++.+...+.+ +.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 314 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ-TPLQL 314 (408)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc-cHHHH
Confidence 44455566665554433333 45566677788889999999999999999999999888888887777776 78889
Q ss_pred HHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHH
Q 013609 102 VVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLW 181 (439)
Q Consensus 102 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 181 (439)
++.+++.|++.+...+...+.+.+..|+++|++.+++.+....+|..+||.+++.+.+..||++.|++.+++.++..+..
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888766666
Q ss_pred hhhccC
Q 013609 182 FKYATD 187 (439)
Q Consensus 182 ~~~~~~ 187 (439)
++..++
T Consensus 395 ~~~~~~ 400 (408)
T PRK09874 395 WNSLRR 400 (408)
T ss_pred HHHHHH
Confidence 554433
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.56 E-value=4.8e-14 Score=130.10 Aligned_cols=168 Identities=27% Similarity=0.407 Sum_probs=150.1
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhh-CCCccchhhhhhhhhhhhhhhcccccccccccCchH-HHHHHHHHHHHHHhhh
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAA-GVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRK-VLLFSFVLWSSTCFWL 91 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~ 91 (439)
..+..+.............|.+.++. |.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 259 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL 259 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 34445555566666677777776665 899999999999999999999999999999999999 9999999999999999
Q ss_pred cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHh
Q 013609 92 KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEA 171 (439)
Q Consensus 92 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~ 171 (439)
...+ +.+.+.+..++.|++.+...+...+++.|..|+|+|++.+++.+....+|..+++.+.+.+.+..+|+..+.+.+
T Consensus 260 ~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~ 338 (352)
T cd06174 260 ALAP-SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILA 338 (352)
T ss_pred HHhc-cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHH
Confidence 9886 899999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred HHHHHHHHHHh
Q 013609 172 ALGGMWSLLWF 182 (439)
Q Consensus 172 ~~~~~~~~~~~ 182 (439)
++.++..+...
T Consensus 339 ~~~~i~~i~~~ 349 (352)
T cd06174 339 ALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHhe
Confidence 88887665543
No 131
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.55 E-value=3.9e-14 Score=139.73 Aligned_cols=137 Identities=17% Similarity=0.154 Sum_probs=118.0
Q ss_pred hhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCC
Q 013609 50 LSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPP 129 (439)
Q Consensus 50 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 129 (439)
..+..++..++.++.|+++||+|||+++..+.++.+++.++.++.+ +...+++.+++.|++.+...+...++++|++|.
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~-s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt 679 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN-SESAMIALLCLFGGLSIAAWNALDVLTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 4566688899999999999999999999999999999999999987 788888889999988888899999999999999
Q ss_pred cccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccCCC
Q 013609 130 HERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATDPP 189 (439)
Q Consensus 130 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 189 (439)
++|++++|+.++...+|.+++|.+++.+.+. +...+|++.+++.++..++.+ ++||+.
T Consensus 680 ~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~-~LPET~ 737 (742)
T TIGR01299 680 DKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL-KLPDTR 737 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH-hCCCCc
Confidence 9999999999999999999999999988763 456778877777766555555 446644
No 132
>PRK10054 putative transporter; Provisional
Probab=99.55 E-value=1.4e-13 Score=128.82 Aligned_cols=173 Identities=12% Similarity=0.153 Sum_probs=133.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN 315 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 315 (439)
|+++.+.+..++...+......++|.|+++.+|+|+.+.++..+...+...+.++..|+++||+++|+ .+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~----------~~ 76 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR----------YM 76 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch----------hH
Confidence 45677778888888888999999999999889999999999999999999999999999999999998 77
Q ss_pred HHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhccccccccccc-ccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhh
Q 013609 316 TVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHM-DIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLL 394 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 394 (439)
..+.++..++.+.+.+.++.+..+....+.........+....... ..++++|+++.|+.+...++|..++|.+.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 77 LLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777777776665544433322222222222233334433 455688999999999999999999999999887
Q ss_pred ccccccccCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 013609 395 EAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLL 430 (439)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
+ . +|+.+|.+.+++.+++.+....
T Consensus 157 ~-~-----------g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 157 M-Q-----------SINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred H-h-----------ccCcHHHHHHHHHHHHHHHHHH
Confidence 4 4 6889999888777776554433
No 133
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.55 E-value=1e-13 Score=130.79 Aligned_cols=160 Identities=16% Similarity=0.098 Sum_probs=131.6
Q ss_pred hhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHH
Q 013609 24 ERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVV 103 (439)
Q Consensus 24 ~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 103 (439)
.........|.+.++.|.++.+.+.+.+.+.++..++.++.|+++||+|||+.+..+.+...++.....+.+ +.+.+.+
T Consensus 235 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 313 (406)
T PRK11551 235 VLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP-SFAGMLL 313 (406)
T ss_pred HHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHH
Confidence 333444557788888999999999999999999999999999999999999999888777777777777776 7777888
Q ss_pred HHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC-CchhHHHHhHHHHHHHHHHh
Q 013609 104 ARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG-PNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 104 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~ 182 (439)
.-++.|++.+...+...++..|.+|+++|++..|+.+....+|..++|.+++.+.++.+ |...++......++..+..+
T Consensus 314 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 314 AGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 88889998887889999999999999999999999999999999999999999988654 55556555555444444444
Q ss_pred hh
Q 013609 183 KY 184 (439)
Q Consensus 183 ~~ 184 (439)
+.
T Consensus 394 ~~ 395 (406)
T PRK11551 394 LL 395 (406)
T ss_pred HH
Confidence 33
No 134
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.55 E-value=9.2e-14 Score=131.42 Aligned_cols=164 Identities=20% Similarity=0.141 Sum_probs=141.3
Q ss_pred hhHHHHHHHHHh-hCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHH
Q 013609 27 GFSIAYTAAADA-AGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVAR 105 (439)
Q Consensus 27 ~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r 105 (439)
......|.+.++ +|.++.+.+++.+...++..++.++.+++.||.++|+.+..+.++.+++.++..+.+ +.+...+..
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 319 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP-MWILAVLCL 319 (417)
T ss_pred hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc-hHHHHHHHH
Confidence 344556776666 899999999999999999999999999999998888888888888888888888886 888888889
Q ss_pred HHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhc
Q 013609 106 LLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYA 185 (439)
Q Consensus 106 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 185 (439)
++.|++.+...+...+++.|..|+++|++++++.+....+|..+|+.+.|.+.+..|.+..++..+...++..++.....
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 99999988777888899999999999999999999999999999999999999999999999988887777666666565
Q ss_pred cCCCCC
Q 013609 186 TDPPRS 191 (439)
Q Consensus 186 ~~~~~~ 191 (439)
++.++.
T Consensus 400 ~~~~~~ 405 (417)
T PRK10489 400 GELRRF 405 (417)
T ss_pred cccccc
Confidence 555443
No 135
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.54 E-value=4e-14 Score=132.07 Aligned_cols=157 Identities=13% Similarity=0.057 Sum_probs=132.0
Q ss_pred HHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcc-hHH
Q 013609 21 CYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPN-NVF 99 (439)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~ 99 (439)
............+.+.++++.++.+.+.+.+.+.++..++.++.|+++||+|||+.+..+.++..++..+..+.++ +..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T TIGR00890 217 NAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDV 296 (377)
T ss_pred HhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhH
Confidence 3333333444556677889999889999999999999999999999999999999999999998888887777652 223
Q ss_pred HHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHH
Q 013609 100 ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMW 177 (439)
Q Consensus 100 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~ 177 (439)
.+....++.|++.+...+....++.|.+|+++|++..|+.+....+|..++|.+.+.+.++.||++.|++.+++.++.
T Consensus 297 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 297 LFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 345667888988888888888999999999999999999999999999999999999999999999999888766653
No 136
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.53 E-value=1.4e-13 Score=129.05 Aligned_cols=156 Identities=12% Similarity=0.047 Sum_probs=127.5
Q ss_pred hhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHH
Q 013609 27 GFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVAR 105 (439)
Q Consensus 27 ~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r 105 (439)
.+....|. +.+++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.....+........+ +.+.+++.+
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~ 312 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH-SPAILLGLQ 312 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHH
Confidence 34445565 4567899999999998888888888999999999999999988877666655555555564 788888899
Q ss_pred HHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhh
Q 013609 106 LLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKY 184 (439)
Q Consensus 106 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 184 (439)
++.+++.+...+....+..|..| ++|+++.++.+....+|..+++.+++.+.+++||+..|++.+++.++..+..++.
T Consensus 313 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 313 LLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 99988888777778888899987 4699999999999999999999999999998999999998887777655555533
No 137
>PRK12382 putative transporter; Provisional
Probab=99.52 E-value=1.4e-13 Score=129.07 Aligned_cols=158 Identities=19% Similarity=0.212 Sum_probs=134.0
Q ss_pred hhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHH
Q 013609 25 RVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVA 104 (439)
Q Consensus 25 ~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (439)
........|.+.++.+.+ +.++..+.+.++..+++++.|++.||+|||+.+..+..+.+++..+..+.+ +.+.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 308 (392)
T PRK12382 232 FAVIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP-TAWVALAG 308 (392)
T ss_pred HhHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc-cHHHHHHH
Confidence 334445555666666654 456667778888899999999999999999999999999888888888886 88888889
Q ss_pred HHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhh
Q 013609 105 RLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKY 184 (439)
Q Consensus 105 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 184 (439)
.++.|++.+...+...+.+.|.+|+|+|+++.++.+....+|..++|.+.+.+.++.||+..|.+.+.+.++..+..++.
T Consensus 309 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 309 AALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999988888888999999999999999999999999999999999999999999999999988887766665544
Q ss_pred c
Q 013609 185 A 185 (439)
Q Consensus 185 ~ 185 (439)
.
T Consensus 389 ~ 389 (392)
T PRK12382 389 F 389 (392)
T ss_pred c
Confidence 3
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.52 E-value=4.4e-13 Score=125.63 Aligned_cols=153 Identities=14% Similarity=0.067 Sum_probs=125.1
Q ss_pred HHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHh-hhcCCcchHHHHHHHHHHHhh
Q 013609 32 YTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCF-WLKLDPNNVFILVVARLLVGV 110 (439)
Q Consensus 32 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~ 110 (439)
.|.+.+++|.|..+.+++.+.+.++..++.++.|+++||+|||+... +..+..++.. +....+ +.+.+.+..++.|+
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~g~ 306 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAAN-SEWHLSVLSIFWGI 306 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHH
Confidence 34455568999999999999999999999999999999999887544 4444444433 334554 78888889999999
Q ss_pred hcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccC
Q 013609 111 SQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATD 187 (439)
Q Consensus 111 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 187 (439)
+.+...+...+.+.|..| ++|++++++.+....+|..+||.++|.+.+++|++..|+..+.+.++..+...+..++
T Consensus 307 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 307 AIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred HHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 988777888888888876 6889999999999999999999999999999999999999998888776666655543
No 139
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.51 E-value=4.7e-14 Score=134.45 Aligned_cols=164 Identities=18% Similarity=0.144 Sum_probs=132.2
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhccccccccccc--CchHHHHH--HHHHHHHHHhh
Q 013609 15 FISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKI--GGRKVLLF--SFVLWSSTCFW 90 (439)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l~~--~~~~~~~~~~~ 90 (439)
....++...........+|.+.+++|.+..+.+++.+...++..++.++.|+++||. ++|+...+ +.++.+++.++
T Consensus 247 ~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll 326 (455)
T TIGR00892 247 LSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLL 326 (455)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444555567777788999999999999999999999999999999983 34443333 33444455556
Q ss_pred hcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc-CCchhHHH
Q 013609 91 LKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN-GPNSVFNA 169 (439)
Q Consensus 91 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~wr~~f~~ 169 (439)
+.+.+ +++.+++.+++.|++.+...+...+++.|.+|++++++.+++.+....+|..+||.+++.+.+.. +|++.|++
T Consensus 327 ~~~~~-~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~ 405 (455)
T TIGR00892 327 CALAG-DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYA 405 (455)
T ss_pred HHHhc-hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHH
Confidence 66775 88999999999999999999999999999999999999999999999999999999999999877 59999999
Q ss_pred HhHHHHHHHH
Q 013609 170 EAALGGMWSL 179 (439)
Q Consensus 170 ~~~~~~~~~~ 179 (439)
.+++.++..+
T Consensus 406 ~~~~~li~~~ 415 (455)
T TIGR00892 406 SGSIVVSAGL 415 (455)
T ss_pred hhHHHHHHHH
Confidence 8877665443
No 140
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.50 E-value=3.1e-13 Score=126.11 Aligned_cols=163 Identities=14% Similarity=0.038 Sum_probs=141.6
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCC
Q 013609 15 FISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLD 94 (439)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 94 (439)
.+..++.......+....|...+|+|.++.+.|.+.+...++..+..++.+++.||+|+|+.+.++.+...+...+.+++
T Consensus 211 l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 211 LAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 34444445555556667777778899999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHh-hhhhHHHHHHhhhhhhhhcccCCchhHHHHhHH
Q 013609 95 PNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTT-SGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAAL 173 (439)
Q Consensus 95 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~ 173 (439)
+ |.+.++..+.+.|+..+...+....++.+. |+++|++..++++ ...++|..+++.++|.+.|+.|+ ..|++.+.+
T Consensus 291 ~-~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~ 367 (382)
T TIGR00902 291 E-AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAII 367 (382)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHH
Confidence 6 999999999999999999999999999998 9999999999986 47889999999999999999986 668888877
Q ss_pred HHHHHHH
Q 013609 174 GGMWSLL 180 (439)
Q Consensus 174 ~~~~~~~ 180 (439)
+++..++
T Consensus 368 ~~~~~~~ 374 (382)
T TIGR00902 368 AAAAFFL 374 (382)
T ss_pred HHHHHHH
Confidence 7665444
No 141
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.50 E-value=6.1e-13 Score=126.30 Aligned_cols=171 Identities=16% Similarity=0.170 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN 315 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 315 (439)
+.++...+..++.+.....+....|.+.++ +|.|+.+.+++.+...++..+++++.|++.||+++|+ .+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~----------~~ 91 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARY----------FM 91 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCch----------hH
Confidence 344455555566666666777888888877 8999999999999999999999999999999999999 88
Q ss_pred HHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccC-CChhhHHHHHHHHHhhhhHHHHHHHHHHhh
Q 013609 316 TVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVDMTGKLL 394 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 394 (439)
..+.++.+++.+.....++.+......++.....+...+.......+.. +++|++++|+.+...++|..++|.+.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 171 (434)
T PRK11663 92 GIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA 171 (434)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888877777666554443333222222333344444545544 478999999999999999999999999999
Q ss_pred ccccccccCCCCcccchhHHHHHHHHHHHHHHHH
Q 013609 395 EAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVF 428 (439)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
+.. +|+..|.+.+++.++..+..
T Consensus 172 ~~~-----------gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 172 LHY-----------GWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred Hcc-----------cHHHHHHHHHHHHHHHHHHH
Confidence 887 89999988877665544333
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.49 E-value=7.5e-13 Score=123.61 Aligned_cols=152 Identities=16% Similarity=0.142 Sum_probs=126.1
Q ss_pred hhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHH
Q 013609 27 GFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARL 106 (439)
Q Consensus 27 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 106 (439)
.....+|.+.++.|.++++.++..+...++..+++++.|++.||+|+|+++..+..+..++..... + + ........
T Consensus 218 ~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~-~~~~~~~~ 293 (381)
T PRK03633 218 SLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-Q-AAMAPALF 293 (381)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-h-HHHHHHHH
Confidence 334456777778899999999999999999999999999999999999999988888777665443 2 2 23345677
Q ss_pred HHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHh
Q 013609 107 LVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 107 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 182 (439)
+.|++.....|...+.+.|..|+++++...+......++|..+||.++|.+.|+.+|++.|.+.+.+.++..+..+
T Consensus 294 l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 294 ILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 8888777788999999999999888888888888899999999999999999999999999998888776554443
No 143
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.48 E-value=3.1e-13 Score=129.62 Aligned_cols=171 Identities=15% Similarity=0.140 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHH-HHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHh
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAA-ADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCF 89 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 89 (439)
+..+++..++............|.+ .+++|.|..+.++..+...++..++.+++|+++||+|||+.+.....+..++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 3444555555555555556667764 567899999999999999999999999999999999999887665444433322
Q ss_pred --hhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhH-HHHHHhhhhhhhhc-------
Q 013609 90 --WLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYL-GAAMGMLFLPSLVK------- 159 (439)
Q Consensus 90 --~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~------- 159 (439)
.....+ +.+.+.+.+++.|++.............|.+|+++||++.|+.+....+ |..++|.+.|.+.+
T Consensus 340 ~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~ 418 (467)
T PRK09556 340 LGVYQHAT-SEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTP 418 (467)
T ss_pred HHHHHhcC-cHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccc
Confidence 223343 6667778888888654433333346677999999999999999998886 77999999999999
Q ss_pred -----ccCCchhHHHHhHHHHHHHHHHh
Q 013609 160 -----YNGPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 160 -----~~~wr~~f~~~~~~~~~~~~~~~ 182 (439)
..+|+..|++.++..++..+..+
T Consensus 419 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 419 IFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred cccccccChHHHHHHHHHHHHHHHHHHH
Confidence 57899999988777666544443
No 144
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.47 E-value=4.8e-13 Score=129.04 Aligned_cols=180 Identities=12% Similarity=0.093 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHh
Q 013609 10 IVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCF 89 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 89 (439)
.+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++.+++.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 364 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLF 364 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 33344444444444445556667888889999998889999999999999999999999999999999998888777766
Q ss_pred hhc---CCc-c------hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc
Q 013609 90 WLK---LDP-N------NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK 159 (439)
Q Consensus 90 ~~~---~~~-~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 159 (439)
+.+ ... + +...+....++.+.......+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 365 VLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred HHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665 111 0 222233333333332233456777788999999999999999999999999999999999999
Q ss_pred ccCCchhHHHHhHHHHHHHHHHhhhccCCC
Q 013609 160 YNGPNSVFNAEAALGGMWSLLWFKYATDPP 189 (439)
Q Consensus 160 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 189 (439)
+.+|++.|++.++++++..+...++.||++
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHheecccCC
Confidence 899999999999888887777766666544
No 145
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.47 E-value=1.7e-12 Score=124.08 Aligned_cols=176 Identities=11% Similarity=0.070 Sum_probs=135.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCcccccchhhhhhHHHHHHHHHHHHHHHHH-hhhccccchhhhhH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELG--LQLSLQEMGSSKMMPYLNMFIFSNIGGVVADH-LITKRILSVTRTRK 312 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~ 312 (439)
+.++.+....++..+++++...++|.|+++. +|++..+++.+.+...+...++.+++|+++|| +|||+
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~--------- 80 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKK--------- 80 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHH---------
Confidence 3456666777777899999999999999987 89999999999999999999999999999999 89999
Q ss_pred HHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccC-CC---hhhHHHHHHHHHhhhhHHHHHH
Q 013609 313 FLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIA-PR---YAGIVMGISNTAGTLAGIVGVD 388 (439)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~g~~~~~~~~g~~i~~~ 388 (439)
.+..+.++.+++.+++...++.........+.....+...+.......+.. ++ +|+++.++.+...++|..++|.
T Consensus 81 -~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 81 -TMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred -HHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 888888888888888777655443333222222222333344444444443 33 4888999999999999999999
Q ss_pred HHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 389 MTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 389 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
+.+.+.+.. +|+..|.+.++..+++.+.+...+
T Consensus 160 l~g~l~~~~-----------g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 160 LAGVIAENY-----------GYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHhc-----------ChHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999887 799999988877666655554433
No 146
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.46 E-value=2.2e-12 Score=121.56 Aligned_cols=175 Identities=15% Similarity=0.146 Sum_probs=132.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHh-hhccccchhhhhHH
Q 013609 235 NLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHL-ITKRILSVTRTRKF 313 (439)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~ 313 (439)
.+.++..+...+...++++++..++|.|+++.+|+++.+++.+.........++.+++|+++||+ |||+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr---------- 77 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRM---------- 77 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH----------
Confidence 34566777777888889999999999999988999999999999999999999999999999999 9998
Q ss_pred HHHHHHHHHHHHHhhhcccCC-hhHHHH-HHHHHHHhhhcccccccccccccCC-C--hhhHHHHHHHHHhhhhHHHHHH
Q 013609 314 LNTVGFMVASIALMALPIFRS-SNGAIF-CSSIALGFLALGRAGFAVNHMDIAP-R--YAGIVMGISNTAGTLAGIVGVD 388 (439)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~g~~~~~~~~g~~i~~~ 388 (439)
.+..+.++..++.+++...+. ...... ..++..+. +...+.......|..| + +|.++.++.....++|+.++|.
T Consensus 78 ~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~-G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 78 AVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGY-GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhc-ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 778888888777665543321 121221 22222222 2333444455566554 3 6999999999999999999999
Q ss_pred HHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 389 MTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 389 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+.+++.+.. +|+..|.+.++..+++.+.+...
T Consensus 157 l~g~L~~~~-----------Gw~~~F~iaaigm~l~li~~~~~ 188 (493)
T PRK15462 157 ACGYAQEEY-----------SWAMGFGLAAVGMIAGLVIFLCG 188 (493)
T ss_pred HHHHHHhhh-----------ChHHHHHHHHHHHHHHHHHHHHh
Confidence 999999887 89999998877666666655543
No 147
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.46 E-value=2.3e-12 Score=120.85 Aligned_cols=171 Identities=13% Similarity=0.143 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHH
Q 013609 239 WAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVG 318 (439)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 318 (439)
+......++...+.+....++|.|++++.|.|+.+.|+..+...+...+.+++.|+++||+++|+ .+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~----------~l~~~ 82 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKP----------MIVTG 82 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchH----------HHHHH
Confidence 44556777888888888999999998889999999999999999999999999999999999998 88888
Q ss_pred HHHHHHHHhhhcccCChhHHHHHHHHHHHhhhccccccccccc-ccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 319 FMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHM-DIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
..+.++..+.....++.+.......+.....+...+....... ..++|+|+++.|+.+...++|..++|.+.+.+. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~ 161 (400)
T PRK11646 83 MLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY 161 (400)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence 8888888887777666554433333222222223333333344 456689999999999999999999999999998 44
Q ss_pred cccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 398 KTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+|+..|++.++..++..++....
T Consensus 162 -----------g~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 162 -----------DFRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHHh
Confidence 79999998887776665544333
No 148
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.46 E-value=1.6e-12 Score=121.70 Aligned_cols=173 Identities=15% Similarity=0.077 Sum_probs=133.7
Q ss_pred HHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcch
Q 013609 18 TCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNN 97 (439)
Q Consensus 18 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 97 (439)
.++............|.+.+++|.+..+.+...+.+.++..++.+..|++.||+|||+.+..+..+..++..+....+.+
T Consensus 214 ~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~ 293 (393)
T PRK09705 214 FGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQ 293 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccch
Confidence 33334444455566777777889999999999999999999999999999999999999998888777776655433323
Q ss_pred HHHHHHHHHHHhhhcccchhhHHHHhhhccC-CcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC-CchhHHHHhHHHH
Q 013609 98 VFILVVARLLVGVSQGFIFPSIHTVLAQWVP-PHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG-PNSVFNAEAALGG 175 (439)
Q Consensus 98 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~ 175 (439)
...+. -.+.|++.+...+.......+..+ +++|++..+..+....++..++|.+.+++.+..| |+..|.+.+..++
T Consensus 294 ~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~ 371 (393)
T PRK09705 294 LPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVV 371 (393)
T ss_pred HHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 32222 246788888888888777777775 5789999999999999999999999999999776 7888888777777
Q ss_pred HHHHHHhhhccCCCCCC
Q 013609 176 MWSLLWFKYATDPPRSE 192 (439)
Q Consensus 176 ~~~~~~~~~~~~~~~~~ 192 (439)
+.......+.||+++++
T Consensus 372 ~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 372 GLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHhccccccch
Confidence 66666566666655543
No 149
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.46 E-value=7.5e-13 Score=123.46 Aligned_cols=151 Identities=13% Similarity=0.087 Sum_probs=126.8
Q ss_pred HHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHH
Q 013609 30 IAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLV 108 (439)
Q Consensus 30 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 108 (439)
...|. +.+++|.++.+.+++.+.......++.++.|++.||+|||+.+.++.++..+......+.+ +.+.+.+.+.+.
T Consensus 220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 298 (375)
T TIGR00899 220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN-SLWALLMLQLLN 298 (375)
T ss_pred hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 33444 4577899999999988888777888899999999999999999888777666665555665 788888899999
Q ss_pred hhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHh
Q 013609 109 GVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 109 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 182 (439)
|++.+...+....++.|..|+ +|++++++.+....+|..++|.+++.+.+..||+..|++.++..++..+...
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 999888888888999998875 5679999999999999999999999999999999999998887776655544
No 150
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.45 E-value=5.3e-12 Score=121.06 Aligned_cols=173 Identities=20% Similarity=0.269 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHH
Q 013609 246 FTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIA 325 (439)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (439)
++.....+......|.+.+ .+|++..+.++..+...++..++.++.|+++||+|+|+ .+..+.++..++
T Consensus 46 ~~~~~~~~~~~~~~~~l~~-~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~----------~~~~~~~~~~~~ 114 (476)
T PLN00028 46 FTCFVSTFAAAPLLPIIRD-NLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRY----------GSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH----------HHHHHHHHHHHH
Confidence 3333334444455555554 49999999999888888999999999999999999998 777777777777
Q ss_pred HhhhcccCChhHHHHH-HHHHHHhhhccccccccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccC
Q 013609 326 LMALPIFRSSNGAIFC-SSIALGFLALGRAGFAVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSD 403 (439)
Q Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~ 403 (439)
.+.....++....... ++.+++... ..+. .....+. ++++|+.+.|+.+...++|+.+++.+.+.+.+.....+
T Consensus 115 ~~~~~~~~s~~~l~~~r~l~G~~~~~-~~~~-~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~-- 190 (476)
T PLN00028 115 VFCMSLVSSATGFIAVRFFIGFSLAT-FVSC-QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG-- 190 (476)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHh-hHHH-HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 7766666655544332 222333222 2222 2233444 45799999999999888999888877766543211000
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 404 LSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
.....+|+.+|++.+++.++..+..+++.+
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 001137999999988888776666655543
No 151
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=5.7e-13 Score=118.44 Aligned_cols=180 Identities=16% Similarity=0.185 Sum_probs=146.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN 315 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 315 (439)
+.+....+.+...++.-..+..-.|...++ .++|..|.|.+.+...+..-++..+.|.++||.+.|+ .+
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~----------fm 97 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY----------FM 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce----------ee
Confidence 345555666666666666677777777766 7899999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHH--HH
Q 013609 316 TVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMT--GK 392 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~--g~ 392 (439)
..+++++++..+++.+.++.....++..+-..+-+...|........ .++++||+..++-|+..++|+.+.|++. +.
T Consensus 98 ~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 98 AFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 99999999999999998866666666666555556665555554444 5558999999999999999999999999 88
Q ss_pred hhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 013609 393 LLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGERI 437 (439)
Q Consensus 393 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
+.++. +|+..|++-++++++..++.+...|++.+
T Consensus 178 ~~~~~-----------~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 178 FAFHG-----------GWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred HHhcc-----------chhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 88887 89999999999988777777766665443
No 152
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.44 E-value=5.1e-12 Score=121.56 Aligned_cols=177 Identities=15% Similarity=0.111 Sum_probs=128.7
Q ss_pred Hhhhcchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHH-hhhccccch
Q 013609 230 KRIVVNLP-VWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADH-LITKRILSV 307 (439)
Q Consensus 230 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~ 307 (439)
.+.+++|+ ++..+...++..++++.+..+++.|+++.+|++..+++..............+++|+++|| +|+|+
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~---- 89 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKR---- 89 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH----
Confidence 35557764 8888888899999999999999999998899999888777766655555556789999999 59998
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhcccCCh-hHHHHH-HHHHHHhhhcccccccccccccCC-C--hhhHHHHHHHHHhhhh
Q 013609 308 TRTRKFLNTVGFMVASIALMALPIFRSS-NGAIFC-SSIALGFLALGRAGFAVNHMDIAP-R--YAGIVMGISNTAGTLA 382 (439)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~g~~~~~~~~g 382 (439)
.+..+.++..++...+...++. ...... .+.+.+. +...+.......+..| + ++..+.++.+...++|
T Consensus 90 ------~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~-g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG 162 (500)
T PRK09584 90 ------VIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGN-GLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIG 162 (500)
T ss_pred ------HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhh-hcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHH
Confidence 7888888888777776665332 222222 2223322 3333444444555443 2 3556888899999999
Q ss_pred HHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHH
Q 013609 383 GIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVF 428 (439)
Q Consensus 383 ~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
..++|.+.|++.+.. +|+..|.+.++..+++.+.+
T Consensus 163 ~~~gp~i~g~l~~~~-----------g~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 163 SFFSMLATPWLAAKY-----------GWSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHHHHHHhh-----------CHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987 89999998876665555443
No 153
>PRK03699 putative transporter; Provisional
Probab=99.44 E-value=9.8e-13 Score=123.36 Aligned_cols=170 Identities=14% Similarity=0.129 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHH-HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhh
Q 013609 13 LTFISTCVCYIERVGFSIAYTAAA-DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWL 91 (439)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 91 (439)
...+..++.......+....|.+. +++|.|..+.+.+.+.+.++..++.++.|+++||++||+.+.....+..+...+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 288 (394)
T PRK03699 209 FLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF 288 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 334444444444445556677765 6689999999999999999999999999999999999999998887777777666
Q ss_pred cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHh
Q 013609 92 KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEA 171 (439)
Q Consensus 92 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~ 171 (439)
...+ +.+.+.+..++.|++.+...+...+...|..| +++++..+.......+|..++|.+.+.+.+..||+..+++.+
T Consensus 289 ~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~ 366 (394)
T PRK03699 289 VNTD-DPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTAN 366 (394)
T ss_pred HHcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhH
Confidence 6675 77777777888999888788888888888775 556788899989999999999999999999999999999888
Q ss_pred HHHHHHHHHHhhh
Q 013609 172 ALGGMWSLLWFKY 184 (439)
Q Consensus 172 ~~~~~~~~~~~~~ 184 (439)
++.++..+.+...
T Consensus 367 ~~~~~~~~~~~~~ 379 (394)
T PRK03699 367 GLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 8877765544433
No 154
>PRK10504 putative transporter; Provisional
Probab=99.42 E-value=5.3e-12 Score=121.49 Aligned_cols=176 Identities=15% Similarity=0.174 Sum_probs=132.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN 315 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 315 (439)
+.++...+..++.......+..++|.+.++ +|.++.+.++..+...++..++.++.|+++||++||+ ..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~----------~~ 78 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRN----------IF 78 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH----------HH
Confidence 456777788888888888888999999987 8999999999888888999999999999999999998 66
Q ss_pred HHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhh
Q 013609 316 TVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLL 394 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 394 (439)
..+..+..++.+.....++.......-.+.....+...+.......+ .++++|+++.|+.+...++|..++|.+.|.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 66666666666655555554443333332222222223334444444 45578999999999999999999999999999
Q ss_pred ccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 395 EAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
+.. +|+..|.+......++.+......+
T Consensus 159 ~~~-----------gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 159 EYA-----------SWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred hhc-----------cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 987 8999999887777666665555433
No 155
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.42 E-value=1.2e-12 Score=126.30 Aligned_cols=164 Identities=10% Similarity=0.060 Sum_probs=123.1
Q ss_pred hhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCc--chH-HHHHH
Q 013609 27 GFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDP--NNV-FILVV 103 (439)
Q Consensus 27 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~-~~l~~ 103 (439)
......|.+.++.|.+..+..+......+...++.++.|+++||+|||++++.+.++.+++.++.+... +.. .....
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 334456888888998887777777788888999999999999999999999999998888876654321 111 12223
Q ss_pred HHHHHhhhccc-chhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhh------hcccCCchhHHHHhHHHHH
Q 013609 104 ARLLVGVSQGF-IFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSL------VKYNGPNSVFNAEAALGGM 176 (439)
Q Consensus 104 ~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~~wr~~f~~~~~~~~~ 176 (439)
+-++.+.+.+. ..|....+++|.+|+++|++++|+......+|..+++.+.+.+ .+..+|++.|++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 33444444433 3477889999999999999999999999999998886555543 4578899999998888777
Q ss_pred HHHHHhhhccCCCC
Q 013609 177 WSLLWFKYATDPPR 190 (439)
Q Consensus 177 ~~~~~~~~~~~~~~ 190 (439)
..+..+++.||+++
T Consensus 449 ~~~~~~~~~~e~~~ 462 (479)
T PRK10077 449 AALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHhccccCCC
Confidence 77766666666543
No 156
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.42 E-value=2.3e-11 Score=116.92 Aligned_cols=154 Identities=13% Similarity=0.064 Sum_probs=121.2
Q ss_pred HHHHHHHhhCCCccchhhhhh-hhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh---hcCCcchHHHHHHHHH
Q 013609 31 AYTAAADAAGVNQSSKGTILS-TFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW---LKLDPNNVFILVVARL 106 (439)
Q Consensus 31 ~~~~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~~l~~~r~ 106 (439)
..|.+.+++|.+.++.++... ...++..++.++.|+++||+|+|+.+.++.++.++.... .+...++.+.+...-+
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 334456779999999999974 666899999999999999999999887766655544332 2333225555555666
Q ss_pred HHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhh
Q 013609 107 LVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKY 184 (439)
Q Consensus 107 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 184 (439)
++.++.+...+...++..+..+++.+++..++.+...++|..+++++.|.+.+..||+..|.+.++.+++..+...+.
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 766666666677788899999999999999999999999999999999999999999999999888888766666544
No 157
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.42 E-value=8e-11 Score=106.62 Aligned_cols=346 Identities=11% Similarity=0.040 Sum_probs=219.3
Q ss_pred HHHHHHHHh-hCCCccchh-hhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHH
Q 013609 30 IAYTAAADA-AGVNQSSKG-TILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLL 107 (439)
Q Consensus 30 ~~~~~i~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 107 (439)
...|.+.+. .|.+++|+. -+.-...-.+....++...+.|..+.|++++++.+...+...+.-+.+ +...+-+..+.
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~-sv~~mq~~q~~ 103 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT-SVLAMQLMQFF 103 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC-cHHHHHHHHHH
Confidence 344445544 788887763 455566667778888999999999999999999999988888888886 99999999999
Q ss_pred HhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc--cCCchhHHHHhHHHHHHHHHHhhhc
Q 013609 108 VGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY--NGPNSVFNAEAALGGMWSLLWFKYA 185 (439)
Q Consensus 108 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~~wr~~f~~~~~~~~~~~~~~~~~~ 185 (439)
-|++.+ ...+.++++-...|+++-.++.+...+..-+|..++..+|..+... .+.+...++......+.. ++.+++
T Consensus 104 yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~fL 181 (412)
T PF01770_consen 104 YGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIALFL 181 (412)
T ss_pred HHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHHHc
Confidence 999988 4688889998888999999999999999999999999999888763 334444444443333333 333455
Q ss_pred cCCCCCCC--CCC-CcccccCccCc---ccchhhhhc--cccccc-------cccCchHHhhhcchhHHHHHHHHHHHHH
Q 013609 186 TDPPRSEH--PKA-SAAGFGESLLP---MRDQKVKVD--NGGSAM-------KAAKIPWKRIVVNLPVWAIVVNNFTFHY 250 (439)
Q Consensus 186 ~~~~~~~~--~~~-~~~~~~~~~~~---~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (439)
|..++... ++. +.++..+.+.+ ...+...+. ..+... +....++++..++|.++.-.+-..+...
T Consensus 182 P~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atc 261 (412)
T PF01770_consen 182 PMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATC 261 (412)
T ss_pred CCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Confidence 55554321 111 10000000000 000000000 000000 1112344566678888888888888888
Q ss_pred HHHHHHHHHHHHHHHh--hCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhh
Q 013609 251 ALYVLMNWLPTYFELG--LQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMA 328 (439)
Q Consensus 251 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (439)
+++.+.+|.-...++. .+-+..-.|.+-+...+.+.++.+..|++..+..+.. ...+.....+.+..+++
T Consensus 262 gy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~--------~l~l~~~S~l~a~~L~l 333 (412)
T PF01770_consen 262 GYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG--------ELALGVFSLLQAGLLFL 333 (412)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH--------HHHHHHHHHHHHHHHHH
Confidence 8888887777766664 1222233466666666777777777777733333322 23445555666677777
Q ss_pred hcccCChhHHHHHHHHHHHhhhcccc-cccccccccCCChhhHHHHHHHHHhhhhHHHH
Q 013609 329 LPIFRSSNGAIFCSSIALGFLALGRA-GFAVNHMDIAPRYAGIVMGISNTAGTLAGIVG 386 (439)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~ 386 (439)
+...++.+......++..+......+ ...-...+...|.-|...|+++.+..+-..+-
T Consensus 334 m~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtil 392 (412)
T PF01770_consen 334 MSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTIL 392 (412)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHhe
Confidence 77777777766665555444433322 22334445566778888888777655544443
No 158
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.41 E-value=4.2e-12 Score=117.89 Aligned_cols=170 Identities=14% Similarity=0.129 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHH
Q 013609 240 AIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGF 319 (439)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 319 (439)
.+....++...+.......+|.|..+ .+.++.+.+++.+...++..++.++.|+++||+|||+ .+..+.
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~----------~~~~~~ 71 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKK----------VMIGAD 71 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhH----------HHHHHH
Confidence 34556677777777788888988887 7899999999999999999999999999999999999 777776
Q ss_pred HHHHHHHhhhcccC-----ChhHHHHHHHHHHHhhhcccccccccccccC-CChhhHHHHHHHHHhhhhHHHHHHHHHHh
Q 013609 320 MVASIALMALPIFR-----SSNGAIFCSSIALGFLALGRAGFAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVDMTGKL 393 (439)
Q Consensus 320 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 393 (439)
.+..++.......+ +.+.......+.....+...+.......|.. +++|+++.|+.+....+|..++|.+.+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 151 (365)
T TIGR00900 72 LIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLM 151 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 66665555544433 4444333333333333333444455555554 47999999999999999999999999999
Q ss_pred hccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 394 LEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
.+.. +|+..+++.++..+++.+.....
T Consensus 152 ~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 152 YATL-----------GIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHh-----------hHHHHHHHHHHHHHHHHHHHHhc
Confidence 9887 89999988877776665555444
No 159
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.41 E-value=1.4e-12 Score=122.42 Aligned_cols=162 Identities=16% Similarity=0.101 Sum_probs=124.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHH-HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHH--hh
Q 013609 14 TFISTCVCYIERVGFSIAYTAAA-DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTC--FW 90 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~ 90 (439)
.....+.............|.+. +++|.++.+.+...+...++..++.++.|+++||+|||+.+..+..+..+.. ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 303 (394)
T TIGR00883 224 GLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLL 303 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555566677765 6789999999999999999999999999999999999998776554443322 22
Q ss_pred hcC-CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHH-hhhhhHHHHHHhhhhhhhhcccC-CchhH
Q 013609 91 LKL-DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLT-TSGMYLGAAMGMLFLPSLVKYNG-PNSVF 167 (439)
Q Consensus 91 ~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~~-wr~~f 167 (439)
..+ ..++.+.+.....+.|++.+...+...+++.|.+|+++|+++.++. +....+|..++|.+++.+.++.| |+..+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 304 MALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIG 383 (394)
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHH
Confidence 222 1126777778889999998888999999999999999999999984 55677899999999999999888 88877
Q ss_pred HHHhHHHH
Q 013609 168 NAEAALGG 175 (439)
Q Consensus 168 ~~~~~~~~ 175 (439)
+......+
T Consensus 384 ~~~~~~~l 391 (394)
T TIGR00883 384 YYLAALAL 391 (394)
T ss_pred HHHHHHHH
Confidence 76655443
No 160
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.41 E-value=5.3e-12 Score=118.21 Aligned_cols=171 Identities=13% Similarity=0.076 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHH
Q 013609 241 IVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFM 320 (439)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 320 (439)
.....+.............|.+.++ +|.|+.+.++..+...++..++.++.|++.||++||+ .+..+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~----------~~~~~~~ 78 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRP----------VLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH----------HHHHHHH
Confidence 3333344445555555666766655 8999999999999999999999999999999999998 7777888
Q ss_pred HHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccc
Q 013609 321 VASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKT 399 (439)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~ 399 (439)
+..++.+.....++.+......++.....+...+.......| .++++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-- 156 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-- 156 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--
Confidence 888777777766665544443333222223333344444455 45578999999999999999999999999998877
Q ss_pred cccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 400 TYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
+|+..+.+.++..++..+......+
T Consensus 157 ---------~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 157 ---------SWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8999998888777766665554433
No 161
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.41 E-value=5.1e-12 Score=116.69 Aligned_cols=166 Identities=19% Similarity=0.284 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHH
Q 013609 242 VVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMV 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 321 (439)
.+..++...........+|.++.+.+|.++.+.+++.+...++..++.++.|+++||+|+|+ .+..+.++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~----------~l~~~~~~ 71 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR----------VLIIGLLL 71 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH----------HHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee----------eEeehhhh
Confidence 34556667777777788886666779999999999999999999999999999999999999 88888888
Q ss_pred HHHHHhhhcccCChhHHHHHHHHHHHhhhccccccccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccc
Q 013609 322 ASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTT 400 (439)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~ 400 (439)
.+++.+...+.++.+......++.....+...+.......+. ++|+|+++.++.+...++|..++|.+.+.+.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--- 148 (352)
T PF07690_consen 72 FALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF--- 148 (352)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC---
T ss_pred hhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc---
Confidence 888744444434544333333332222234444555555554 4579999999999999999999999999999877
Q ss_pred ccCCCCcccchhHHHHHHHHHHHHHHHH
Q 013609 401 YSDLSSPESWRAVFFIPGLLCILSSFVF 428 (439)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
+|+..|++.+++.+++.++.
T Consensus 149 --------~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 149 --------GWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp --------HHCCHHHHHHHHHHHHHHHH
T ss_pred --------ccccccccccchhhhhhhhH
Confidence 89999999999988887753
No 162
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.40 E-value=5e-12 Score=118.87 Aligned_cols=166 Identities=17% Similarity=0.143 Sum_probs=127.6
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHH-HHHHHHHHHHhhhc-
Q 013609 15 FISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLL-FSFVLWSSTCFWLK- 92 (439)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~- 92 (439)
.+..++............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.....
T Consensus 228 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~ 307 (402)
T TIGR00897 228 GMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYY 307 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3444444455555566778888889999999999999999999999999999999999988764 33333333332222
Q ss_pred ----CCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHH
Q 013609 93 ----LDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFN 168 (439)
Q Consensus 93 ----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~ 168 (439)
..+ +.+...+..++.|++.+...+ ....+.|.. +++|++++|+.+....+|..++|.+++.+.+..||+..++
T Consensus 308 ~~~~~~~-~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~ 384 (402)
T TIGR00897 308 IPQHFGH-SFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVW 384 (402)
T ss_pred HHHccCC-cHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH
Confidence 233 677777888899998876654 455667765 5689999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhh
Q 013609 169 AEAALGGMWSLLWFK 183 (439)
Q Consensus 169 ~~~~~~~~~~~~~~~ 183 (439)
+.+++.++..++..+
T Consensus 385 ~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 385 IFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998887776655544
No 163
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.39 E-value=1.3e-11 Score=114.70 Aligned_cols=175 Identities=13% Similarity=0.143 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 237 PVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
.++..++..+...........+.|.++++.+|.|+.+.+++.+...++..++.++.|+++||+|+|+ .+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~----------~~~ 71 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRY----------TTT 71 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchH----------HHH
Confidence 4566777777778888888899998787789999999999999999999999999999999999999 788
Q ss_pred HHHHHHHHHHhhhcccC-ChhHHHHHHHH-HHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHh
Q 013609 317 VGFMVASIALMALPIFR-SSNGAIFCSSI-ALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKL 393 (439)
Q Consensus 317 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 393 (439)
.+.++..++.+.....+ +.+.....-++ +.+ .+...+ ......+ .++++|+++.++.....++|..+++.+.+.+
T Consensus 72 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 72 LSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIA-GGSFAS-CMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-chhhHh-HHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 88888888877777766 55444333222 222 222222 2333444 4558999999999988889988888888777
Q ss_pred hccccccccCCCCcccchhHH-HHHHHHHHHH
Q 013609 394 LEAAKTTYSDLSSPESWRAVF-FIPGLLCILS 424 (439)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 424 (439)
.+...... +.+...+|+..+ ...+++..+.
T Consensus 150 ~~~~~~~~-~~~~~~~w~~~~~~~~~~~~~~~ 180 (366)
T TIGR00886 150 IGSLIFGA-GLPAHLAWGWAFVIVPAGILLLP 180 (366)
T ss_pred HHHHHhcc-cccccccccchhHHHHHHHHHHH
Confidence 65321110 000113688888 4334444333
No 164
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.39 E-value=8.7e-12 Score=116.47 Aligned_cols=174 Identities=13% Similarity=0.071 Sum_probs=134.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHH
Q 013609 235 NLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFL 314 (439)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 314 (439)
++.++......+............+|.+.++ +|.+..+.++..+...++..+++++.|++.||+++|+ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~----------~ 70 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKH----------I 70 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHH----------H
Confidence 3556677777777778878888888887766 8999999999999999999999999999999999999 8
Q ss_pred HHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccC-CChhhHHHHHHHHHhhhhHHHHHHHHHHh
Q 013609 315 NTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVDMTGKL 393 (439)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 393 (439)
+..+..+.+++.++....++.+.....-.+.....+...+.......+.. +++|+++.+.......++..++|.+.+.+
T Consensus 71 ~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 71 LLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 88888888888888887777665554433322222222233334445544 46899999999999999999999999998
Q ss_pred hccccccccCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 013609 394 LEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLL 430 (439)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
.+.. +|+..|.+.++..++..+....
T Consensus 151 ~~~~-----------gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 151 SQEF-----------SWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred hhhc-----------cHHHHHHHHHHHHHHHHHHHHH
Confidence 8876 8999999988877665554433
No 165
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.38 E-value=1.6e-11 Score=114.91 Aligned_cols=159 Identities=14% Similarity=0.072 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhh
Q 013609 249 HYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMA 328 (439)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (439)
....+.....+|.+.++ +|.++.+.+...+...++..+++++.|++.||+|||+ .+..+.++.+++.+.
T Consensus 33 ~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~----------~~~~~~~~~~~~~~~ 101 (394)
T PRK10213 33 IIVEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRY----------VVILFAVLLTLSCLL 101 (394)
T ss_pred HHHHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHH----------HHHHHHHHHHHHHHH
Confidence 33334445567777665 8999999999999999999999999999999999999 888888888887777
Q ss_pred hcccCChhHHHHHHHHHHHhhhccccccccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCc
Q 013609 329 LPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSP 407 (439)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~ 407 (439)
....++.+..+..-.+.....+...+.......+. ++|+|+++.++.....+++..++|.+.+.+.+..
T Consensus 102 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~---------- 171 (394)
T PRK10213 102 VSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI---------- 171 (394)
T ss_pred HHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------
Confidence 77766655555543333323233334444444454 4588999999999999999999999999999887
Q ss_pred ccchhHHHHHHHHHHHHHHHHH
Q 013609 408 ESWRAVFFIPGLLCILSSFVFL 429 (439)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~ 429 (439)
+|+..|++.+++.++..+...
T Consensus 172 -gw~~~f~~~~~l~~~~~l~~~ 192 (394)
T PRK10213 172 -GWRNVFNAAAVMGVLCIFWII 192 (394)
T ss_pred -CHHHHHHHHHHHHHHHHHHHH
Confidence 899999988776666554443
No 166
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.38 E-value=9.9e-12 Score=118.73 Aligned_cols=155 Identities=20% Similarity=0.244 Sum_probs=138.5
Q ss_pred hhhHHHHHHHH-HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHH
Q 013609 26 VGFSIAYTAAA-DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVA 104 (439)
Q Consensus 26 ~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (439)
..+...+|.+. +++|.++...|++.+++.+|..++.+..+++.+|+++++.+..+.+..+++.+..++++ +.+..++.
T Consensus 235 ~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~-~~~~~~~~ 313 (524)
T PF05977_consen 235 SAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP-SFWLALIA 313 (524)
T ss_pred hHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch-HHHHHHHH
Confidence 34445677765 56899999999999999999999999999999999999999999999999999999997 89999999
Q ss_pred HHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHH
Q 013609 105 RLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLW 181 (439)
Q Consensus 105 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 181 (439)
-++.|++.........+.+.+..|++.|||.++++.+....+..+|..+.|.+.+..|-+..+.+.++..++..++.
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999888776555544443
No 167
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.38 E-value=1.9e-11 Score=117.01 Aligned_cols=174 Identities=18% Similarity=0.209 Sum_probs=131.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHH-hhhccccchhhhhHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADH-LITKRILSVTRTRKFL 314 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~ 314 (439)
|.++..+...+.-.+++++...+++.|+++.+|++..++.++.........+..+++|+++|| +|||+ .
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~----------~ 83 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKR----------T 83 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHH----------H
Confidence 456777777888889999999999999999999999999888888887788888899999999 99999 8
Q ss_pred HHHHHHHHHHHHhhhcccCChhHHH-H-HHHHHHHhhhcccccccccccc-cCCC--hhhHHHHHHHHHhhhhHHHHHHH
Q 013609 315 NTVGFMVASIALMALPIFRSSNGAI-F-CSSIALGFLALGRAGFAVNHMD-IAPR--YAGIVMGISNTAGTLAGIVGVDM 389 (439)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~g~~~~~~~~g~~i~~~~ 389 (439)
+..+.++..++.+......+....+ . ..+.+.+. +...+.......+ .+++ +|+.+.++.....++|..++|.+
T Consensus 84 ~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~-g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 84 IVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGN-GLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcc-ccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence 8888888888877776654433222 2 22222222 3333444445555 4444 45789999999999999999999
Q ss_pred HHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 390 TGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 390 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
.|++.++. +|+..|++.++..+++.+.+...
T Consensus 163 ~g~l~~~~-----------gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 163 APVIADKF-----------GYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHHHhh-----------ChHHHHHHHHHHHHHHHHHHHHc
Confidence 99999987 89999988766555555444443
No 168
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.37 E-value=2.3e-11 Score=117.43 Aligned_cols=174 Identities=20% Similarity=0.137 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHH
Q 013609 238 VWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTV 317 (439)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 317 (439)
+..+++..+....-......-+|.+.++ +|.++.+.++..+.+.++.....+..|+++||+|||+ .+..
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~----------~l~~ 76 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKR----------LLML 76 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH----------HHHH
Confidence 3455566666666677777888988776 8999999999999999999999999999999999999 8888
Q ss_pred HHHHHHHHHhhhcccCChhHHHHHH-HHHHHhhhcccccccccccccC-CChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 318 GFMVASIALMALPIFRSSNGAIFCS-SIALGFLALGRAGFAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
+..+..++.+.....++.+..+..- +.+.+.....+........+.+ +++|+++.|+......+|..++|.+.+.+.+
T Consensus 77 ~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 77 GGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8888888888888777766655543 3344333333223333445554 4799999999999999999999999999999
Q ss_pred cccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 396 AAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
.. +|++.|++...+.++..++.....+
T Consensus 157 ~~-----------gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 157 HF-----------YWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred cC-----------ChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 87 8999999987777766665555433
No 169
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.37 E-value=1.4e-11 Score=113.68 Aligned_cols=162 Identities=14% Similarity=0.054 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhh
Q 013609 249 HYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMA 328 (439)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (439)
...+..+...+|.+.+| +|.|+.+.+++.+...++..++++..|+++||+|||+ +..........+...
T Consensus 4 ~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~----------~~~~~~~~~~~~~~~ 72 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRW----------FLFGSLATFAAAAGR 72 (368)
T ss_pred hHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH----------HHHHHHHHHHHHHHH
Confidence 34455666777777776 8999999999999999999999999999999999877 544444444333322
Q ss_pred hcccCChhHHHHH-HHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCc
Q 013609 329 LPIFRSSNGAIFC-SSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSP 407 (439)
Q Consensus 329 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~ 407 (439)
....++....+.. ++.+.+.. ...+......+..++|+|+++.++.+....+|..+++.+.+.+.+..
T Consensus 73 ~~~~~~~~~l~~~R~l~G~g~~-~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~---------- 141 (368)
T TIGR00903 73 LLDPFNYEWLLACQLLAALGQP-FLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG---------- 141 (368)
T ss_pred HHHhccHHHHHHHHHHHHhHhH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------
Confidence 2222333333333 22233322 22233333445566789999999999999999999999999998876
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 408 ESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
+|+..|.+.+++.++..++.+...+
T Consensus 142 -gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 142 -GLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8999999988777666555554433
No 170
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.36 E-value=2.3e-11 Score=114.64 Aligned_cols=176 Identities=11% Similarity=0.077 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHH
Q 013609 239 WAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVG 318 (439)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 318 (439)
....+.+++.+.-........| .+++++|.+..+.++..+...++..++++..|++.||+|||+ .+..+
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~----------~~~~~ 79 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR----------WIAGI 79 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH----------HHHHH
Confidence 3444444444554555555566 566669999999999999999999999999999999999999 88888
Q ss_pred HHHHHHHHhhhcccCChhHHHHHH-HHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhcc
Q 013609 319 FMVASIALMALPIFRSSNGAIFCS-SIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
.++..++.....+.++.......- +.+.+.+.. .+.......+..| ++|+++.|+.+....+|..+++.+.+.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 80 MVLWGIASTATMFATGPESLYLLRILVGIAEAGF-LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888888888877776665444433 333333333 3444445566554 7899999999999999999999999988753
Q ss_pred ccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 397 AKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
... .+..+|+..|.+.++..++..++.++.
T Consensus 159 ~~~-----~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 159 DGL-----MALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred CCC-----CCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 100 011389999999877776554444443
No 171
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=1.1e-11 Score=116.30 Aligned_cols=170 Identities=14% Similarity=0.040 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHH-HHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchH--H------HHHHH
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAA-ADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRK--V------LLFSF 81 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~------l~~~~ 81 (439)
.....+..++............|.+ .+++|.++.+.+++.+...++..++.++.|+++||+|||+ . ...+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
T TIGR00893 217 VWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAG 296 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Confidence 3444455555555666666667765 4568989999999999999999999999999999999996 1 11122
Q ss_pred HHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc
Q 013609 82 VLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN 161 (439)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 161 (439)
++..+........+ +.+..+....+.+.+.+ ..+...+++.|.+|+++|++..++.+....+|..++|.+.+.+.+..
T Consensus 297 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 297 LVLSLLMFATNYVN-IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHHHHHHHhccch-hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 22222222333333 45555555555555555 78999999999999999999999999999999999999999999988
Q ss_pred C-CchhHHHHhHHHHHHHHHHh
Q 013609 162 G-PNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 162 ~-wr~~f~~~~~~~~~~~~~~~ 182 (439)
| |+..|++.++..++..+..+
T Consensus 375 g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 375 GSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred CchhHHHHHHHHHHHHHHHHHH
Confidence 8 99999988887776555443
No 172
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.36 E-value=1.9e-11 Score=118.14 Aligned_cols=172 Identities=17% Similarity=0.102 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHH
Q 013609 239 WAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVG 318 (439)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 318 (439)
..+++..+.............|.+.++ +|.++.+.+++.+...++..++.++.|++.||+|||+ .+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~----------~~~~~ 73 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRR----------LFLIS 73 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHH----------HHHHH
Confidence 344555566666666777778888776 8999999999999999999999999999999999999 88888
Q ss_pred HHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 319 FMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
.++..++.......++....+..-.+.....+...+.......+ .++++|+++.++......+|..++|.+.+++.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 153 (485)
T TIGR00711 74 TFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY 153 (485)
T ss_pred HHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc
Confidence 88888888877777666554444333322233333444444445 45589999999999999999999999999999887
Q ss_pred cccccCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 398 KTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
+|+..|++.+.+.++..++.....
T Consensus 154 -----------~w~~~f~~~~~~~~~~~~~~~~~~ 177 (485)
T TIGR00711 154 -----------HWRWIFLINVPIGIIVVVVAFFIL 177 (485)
T ss_pred -----------CceehhhhhhHHHHHHHHHHHHHc
Confidence 899999888777766655554443
No 173
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.35 E-value=2.7e-11 Score=109.18 Aligned_cols=173 Identities=18% Similarity=0.149 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW 90 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 90 (439)
........+...-....+..+-|.+.+..|.|.++++++.-.|.++..++..+.|+++|| +.|+.+.....+.++..+.
T Consensus 214 ~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~ 292 (394)
T COG2814 214 LLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLA 292 (394)
T ss_pred HHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHH
Confidence 333334444444555667777888888899999999999999999999999999999999 9999999988888877777
Q ss_pred hcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHH
Q 013609 91 LKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAE 170 (439)
Q Consensus 91 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~ 170 (439)
..+.+++.+..++.-++.|+............+++ ..+|.+..+.+++....++|..+|..++|.+.+++|+....++.
T Consensus 293 l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~ 371 (394)
T COG2814 293 LTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVG 371 (394)
T ss_pred HHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Confidence 77666577777777788888877666666666666 33688999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhc
Q 013609 171 AALGGMWSLLWFKYA 185 (439)
Q Consensus 171 ~~~~~~~~~~~~~~~ 185 (439)
+++.++...+.+...
T Consensus 372 a~l~~~a~~~~~~~~ 386 (394)
T COG2814 372 AALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998888766665443
No 174
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.35 E-value=1.4e-11 Score=115.03 Aligned_cols=152 Identities=16% Similarity=0.011 Sum_probs=127.2
Q ss_pred hhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHH
Q 013609 24 ERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVV 103 (439)
Q Consensus 24 ~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 103 (439)
.........|.+.+|.|.++.+.|.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.++.++++ +.+.+++
T Consensus 220 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~ 298 (382)
T PRK11128 220 SHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT-ALPWLIV 298 (382)
T ss_pred HhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHH
Confidence 333444555666678999999999999999999999999999999999999999999999988888888886 8999999
Q ss_pred HHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHh-hhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHH
Q 013609 104 ARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTT-SGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWS 178 (439)
Q Consensus 104 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~ 178 (439)
..++.|++.+...+....++.+. +++++++..+..+ ....+|..+||.++|.+.|..|+ ..|+..+.+.++..
T Consensus 299 ~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 299 IQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 99999999998889999998887 5667788899886 56678889999999999998887 46666666655443
No 175
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.34 E-value=4.3e-11 Score=112.31 Aligned_cols=173 Identities=13% Similarity=0.093 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHH
Q 013609 238 VWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTV 317 (439)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 317 (439)
+.......+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+ .+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~----------~l~~ 73 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKP----------VAIP 73 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChH----------HHHH
Confidence 3344455555666666667778887776 8999999999999999999999999999999999998 7777
Q ss_pred HHHHHHHHHhhhcccCChhHHHHHHHH-HHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 318 GFMVASIALMALPIFRSSNGAIFCSSI-ALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
+.++..++.......++.........+ +.+... ..+.......+ .++++|+++.++.+....++..++|.+.+.+.+
T Consensus 74 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~ 152 (392)
T PRK10473 74 GAALFIIASLLCSLAETSSLFLAGRFLQGIGAGC-CYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML 152 (392)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 877777777777666555443333222 222222 22233334444 456899999999999999999999999988887
Q ss_pred cccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 396 AAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
.. +|+..+++.+++.++..+......+
T Consensus 153 ~~-----------g~~~~~~~~~~~~~i~~~~~~~~~~ 179 (392)
T PRK10473 153 KF-----------PWQSLFYTMAAMGILVLLLSLFILK 179 (392)
T ss_pred Cc-----------ChHHHHHHHHHHHHHHHHHHHHHcC
Confidence 76 7999998888777666655544433
No 176
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.34 E-value=1.1e-11 Score=117.73 Aligned_cols=139 Identities=13% Similarity=0.081 Sum_probs=106.1
Q ss_pred hHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcc-hHHHHHHHHH
Q 013609 28 FSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPN-NVFILVVARL 106 (439)
Q Consensus 28 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~ 106 (439)
+....|.+.++.|.++.+.+...+.+.++..++.++.|++.||+|||+.+..+.++..+........++ +...+...-+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 445677777788999999999999999999999999999999999999999888776665554433221 2222222222
Q ss_pred HHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchh
Q 013609 107 LVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSV 166 (439)
Q Consensus 107 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~ 166 (439)
..+++.....+..+.++.|.+|+++|++++|+......+|..++|.+.+++.+..|+...
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 222333334456678889999999999999999999999999999999999998876554
No 177
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.34 E-value=9.7e-12 Score=118.77 Aligned_cols=173 Identities=14% Similarity=0.100 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHh-hCCCccchhhhhhhhhhhhhhhccccccccccc--CchHHH-HHHHHHHHHH
Q 013609 12 ILTFISTCVCYIERVGFSIAYTAAADA-AGVNQSSKGTILSTFYYGYACSQVPGGWAAQKI--GGRKVL-LFSFVLWSST 87 (439)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~ 87 (439)
....+..++............|.+.++ .|.+..+.++..+.+.++..++.++.|+++||+ +||+.. .....+..++
T Consensus 256 ~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~ 335 (452)
T PRK11273 256 WYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA 335 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHH
Confidence 334444444444445556677776554 789989999999999999999999999999999 555432 2222333333
Q ss_pred HhhhcC--CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHH-HHhhhhhhhhcccCCc
Q 013609 88 CFWLKL--DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAA-MGMLFLPSLVKYNGPN 164 (439)
Q Consensus 88 ~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~~wr 164 (439)
.....+ .. +.+...+..++.|.+..........+..|.+|+++||+++|+.+....+|.. .+|.+.+.+.++.||+
T Consensus 336 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~ 414 (452)
T PRK11273 336 TIVYWLNPAG-NPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWD 414 (452)
T ss_pred HHHHHHhccc-ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcch
Confidence 322222 22 4555555555556543333333445678999999999999999988888765 4799999999999999
Q ss_pred hhHHHHhHHHHHHHHHHhhhc
Q 013609 165 SVFNAEAALGGMWSLLWFKYA 185 (439)
Q Consensus 165 ~~f~~~~~~~~~~~~~~~~~~ 185 (439)
..|++.++.+++..+....+.
T Consensus 415 ~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 415 GGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999988887776655554343
No 178
>PRK11043 putative transporter; Provisional
Probab=99.34 E-value=4.7e-11 Score=112.39 Aligned_cols=172 Identities=14% Similarity=0.104 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHH
Q 013609 241 IVVNNFTFHYALYVLMNWLPTY--FELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVG 318 (439)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 318 (439)
+..........+.....+.|.+ +++.+|.++.+.+...+...++..++.++.|+++||++||+ .+..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~----------~~~~~ 77 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKP----------VLLAG 77 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcH----------HHHHH
Confidence 3333334444445555555544 45568999999999999999999999999999999999999 77777
Q ss_pred HHHHHHHHhhhcccCChhHHHHHHH-HHHHhhhcccccccccc-cccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcc
Q 013609 319 FMVASIALMALPIFRSSNGAIFCSS-IALGFLALGRAGFAVNH-MDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
..+..++.+.....++.+....... .+.+..... +...... +..++++++...+..+....++..++|.+.+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 156 (401)
T PRK11043 78 LSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAA-VIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH 156 (401)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777777766666655544433322 222222222 2222333 344556788889999988999999999999999988
Q ss_pred ccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 397 AKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
. +|+..+.+.+++.++..+..+..+++
T Consensus 157 ~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 157 F-----------GWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred C-----------ChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 7 89999988887777766665555443
No 179
>PRK09952 shikimate transporter; Provisional
Probab=99.34 E-value=2.4e-11 Score=115.48 Aligned_cols=161 Identities=12% Similarity=0.068 Sum_probs=116.0
Q ss_pred hhhHHHHHH-HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcC---CcchHHHH
Q 013609 26 VGFSIAYTA-AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKL---DPNNVFIL 101 (439)
Q Consensus 26 ~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~l 101 (439)
.......|. +.+++|.++.+...+.........++.++.|+++||+|||+++..+.++..++...... ..++.+.+
T Consensus 267 ~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (438)
T PRK09952 267 YIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIV 346 (438)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 333444454 45678888776655666666777888899999999999999998887765554432221 22245555
Q ss_pred HHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhh-hhhHHHHHHhhhhhhhhccc--CCchhHHHHhHHHHHHH
Q 013609 102 VVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTS-GMYLGAAMGMLFLPSLVKYN--GPNSVFNAEAALGGMWS 178 (439)
Q Consensus 102 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~--~wr~~f~~~~~~~~~~~ 178 (439)
++..++.|++.+...+...++++|.+|.+.|+...++... +..+|..++|.+.+++.+.. +|+..+...++..++..
T Consensus 347 ~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~ 426 (438)
T PRK09952 347 FFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA 426 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 5566777888887888889999999999999988888554 45589999999999998743 48888887777776655
Q ss_pred HHHhhhccC
Q 013609 179 LLWFKYATD 187 (439)
Q Consensus 179 ~~~~~~~~~ 187 (439)
+..+ ..+|
T Consensus 427 v~~~-~~~~ 434 (438)
T PRK09952 427 MTAL-LMKD 434 (438)
T ss_pred HHHH-Hccc
Confidence 5554 3444
No 180
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.33 E-value=4.7e-11 Score=111.45 Aligned_cols=188 Identities=11% Similarity=-0.010 Sum_probs=124.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHH
Q 013609 235 NLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFL 314 (439)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 314 (439)
+|.++...+.........+.+....+.+-++.+|+|..|.+++.+...+...+.++..|++.||+|.|+ +
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~----------v 102 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRR----------W 102 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH----------H
Confidence 356677676666666666666666666666469999999999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHHHhhhccc-----CChhHHHHH-HHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHH
Q 013609 315 NTVGFMVASIALMALPIF-----RSSNGAIFC-SSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGV 387 (439)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~ 387 (439)
...+.++..+..+...+. ++....+.. .+.+.+ +...+.......+ .++++||++.|+.....++|..+++
T Consensus 103 ~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig--g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 103 TVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA--GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH--HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 778877777777776653 344333333 233332 3333334444445 4457899999999877778877666
Q ss_pred HHHHHhh-----ccccccccC--CCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 388 DMTGKLL-----EAAKTTYSD--LSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 388 ~~~g~l~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
.+...+. +..+..... ..+..+++.+..+...+.++..+..++..++
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6655433 222111000 0012357777777777776666666655443
No 181
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.33 E-value=5.2e-11 Score=112.30 Aligned_cols=175 Identities=11% Similarity=0.050 Sum_probs=126.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 237 PVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
.+....+..+.............|.+.++ +|.++.+.+++.+...++..++.++.|++.||+|||+ .+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~----------~~~ 81 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAEVAGE-FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRL----------PMV 81 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH----------HHH
Confidence 34455666666666666677777766554 9999999999999999999999999999999999999 777
Q ss_pred HHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccc-cccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 317 VGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNH-MDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
.+.++.+++.+.....++.........+.....+...+...... +..++++|+++.++.+....+|..+++.+.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78777777777777666655544433332222233333333344 44556899999999999999999999999999887
Q ss_pred cccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 396 AAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
..+ .+|+..+.+.++..++..+.....
T Consensus 162 ~~~---------~~w~~~f~~~~~~~~~~~~~~~~~ 188 (405)
T TIGR00891 162 VWG---------DGWRALFFISILPIIFALWLRKNI 188 (405)
T ss_pred hcC---------ccHHHHHHHHHHHHHHHHHHHHhC
Confidence 651 148888887666555554443333
No 182
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.32 E-value=2.3e-11 Score=115.68 Aligned_cols=176 Identities=12% Similarity=0.036 Sum_probs=117.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHH
Q 013609 234 VNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKF 313 (439)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 313 (439)
+++.++...+.....+.....+....| ++++ .|.++.+.++..+...++..++.++.|+++||+++|+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~---------- 92 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRV---------- 92 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCce----------
Confidence 344444444544444444444455556 4555 5999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhhcccC----ChhHHHHH-HHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHH
Q 013609 314 LNTVGFMVASIALMALPIFR----SSNGAIFC-SSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVD 388 (439)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~ 388 (439)
.+..+.++.+++.+.....+ +....... .+.+.+.+....+......+..++++|++++|+.+...++++.+++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 172 (438)
T TIGR00712 93 FLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPL 172 (438)
T ss_pred ehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHH
Confidence 66777777666666554432 22112221 22222222222222233333455689999999999999999999999
Q ss_pred HHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 389 MTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 389 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+.+...+.. .+|+..|++.+++.++..+..++.
T Consensus 173 l~~~~~~~~----------~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 173 LVLLGMAWF----------NDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHHHHHHh----------hhhHHHHHHHHHHHHHHHHHHHHh
Confidence 888766543 389999999888877765544443
No 183
>PRK15075 citrate-proton symporter; Provisional
Probab=99.32 E-value=3.2e-11 Score=114.62 Aligned_cols=144 Identities=15% Similarity=0.102 Sum_probs=105.6
Q ss_pred HHHhhhhhHHHHHHHHHh-hCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh----hcCCc
Q 013609 21 CYIERVGFSIAYTAAADA-AGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW----LKLDP 95 (439)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~----~~~~~ 95 (439)
............|.+.++ +|.+..+.++....+.++..++.++.|+++||+|||+++..+.++..+.... ....+
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 334444455667776554 7999999999888999999999999999999999999988765543322211 11232
Q ss_pred chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhh-hhhHHHHHHhhhhhhhhcccCCch
Q 013609 96 NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTS-GMYLGAAMGMLFLPSLVKYNGPNS 165 (439)
Q Consensus 96 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~wr~ 165 (439)
++..+.....+.|++.+...+....++.|.+|+++|+...++... +..++..++|.+.+.+.++.|+++
T Consensus 330 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 330 -SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred -chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 454555556666777776667777889999999999999998644 444557789999999999888653
No 184
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.31 E-value=2.9e-11 Score=114.28 Aligned_cols=174 Identities=17% Similarity=0.169 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHHhhhh-hHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCch--HHHHHHHHHHHH
Q 013609 10 IVILTFISTCVCYIERVG-FSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGR--KVLLFSFVLWSS 86 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~ 86 (439)
.+....+++++..-..+. .......-.+++|++..+...+.-+..+...++++++|++.||+|.| +++.++++++.+
T Consensus 282 ~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~ 361 (477)
T PF11700_consen 282 QLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWII 361 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 333334444443323333 33344445568999999999999999999999999999999999999 888888877755
Q ss_pred HHhhhcC--------CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhh
Q 013609 87 TCFWLKL--------DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLV 158 (439)
Q Consensus 87 ~~~~~~~--------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 158 (439)
..+...+ .. +-+.+.+.-++.|+..|..++...++.+|..|+++.+..+|++....-....+||.+-+.+.
T Consensus 362 i~~~g~~G~~~~~~g~~-~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~ 440 (477)
T PF11700_consen 362 IPLYGLFGFWPSFFGLK-SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLIT 440 (477)
T ss_pred HHHHHHHHhhhcccCcc-cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444333 33 77889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC-CchhHHHHhHHHHHHHHHHhhh
Q 013609 159 KYNG-PNSVFNAEAALGGMWSLLWFKY 184 (439)
Q Consensus 159 ~~~~-wr~~f~~~~~~~~~~~~~~~~~ 184 (439)
+..| -|..+....++.++..++.++.
T Consensus 441 ~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 441 DATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 8776 8888888877776665555433
No 185
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=3.1e-11 Score=113.49 Aligned_cols=164 Identities=17% Similarity=0.173 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVAS 323 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (439)
..+.............|.+.++ +|.++.+.+++.+...++..++.++.|++.||++||+ .+..+.++..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~----------~~~~~~~~~~ 93 (398)
T TIGR00895 25 IMLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKR----------VLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH----------HHHHHHHHHH
Confidence 3344444445555666766665 8999999999999999999999999999999999998 7777777777
Q ss_pred HHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccccc
Q 013609 324 IALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYS 402 (439)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~ 402 (439)
++.+.....++.+.......+.....+...+.......+..| ++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----- 168 (398)
T TIGR00895 94 VFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF----- 168 (398)
T ss_pred HHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-----
Confidence 777766666555444433333222223334444555555555 78999999999999999999999999999877
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHH
Q 013609 403 DLSSPESWRAVFFIPGLLCILSSFVFL 429 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (439)
+|+..+.+.+++.++..++..
T Consensus 169 ------g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 169 ------GWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred ------cceeehhhhhhHHHHHHHHHH
Confidence 788888887655544444433
No 186
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.31 E-value=2.9e-11 Score=113.59 Aligned_cols=142 Identities=9% Similarity=0.035 Sum_probs=120.7
Q ss_pred CCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhH
Q 013609 40 GVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSI 119 (439)
Q Consensus 40 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 119 (439)
+.+..+.|.+.++..+...++.+..|++.||+|||+.+.++.++.++...+...++ |.+.+++.++++|++........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~ 328 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT-TALEVVILKMLHAFEVPFLLVGC 328 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778889998899999999999999999999999999998888888877886 88888999999999877666667
Q ss_pred HHHhhhccCCcccchhhHH-HhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHh
Q 013609 120 HTVLAQWVPPHERSRSVSL-TTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 120 ~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 182 (439)
..+..+..|++.++...+. .+....+|..+++.++|++.+..||+..|.+.+++.++..+...
T Consensus 329 ~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 329 FKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 7777888888888777766 66789999999999999999999999999999888877655543
No 187
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.31 E-value=4e-11 Score=112.21 Aligned_cols=172 Identities=13% Similarity=0.088 Sum_probs=123.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHH
Q 013609 235 NLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFL 314 (439)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 314 (439)
+|+++.+....++...+........+...++ ++.++.+.+++.+...+...+..++.|+++||++||+ +
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~----------v 70 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGR----------V 70 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCch----------h
Confidence 4667777778788777766666666666655 7888888999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHh
Q 013609 315 NTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKL 393 (439)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 393 (439)
+..+..+.+++.+......+. ...-.+.+.+. +...+.......+ +++|+|++++|+.+...+++..+||.+.|.+
T Consensus 71 l~~~~~~~~~~~~~~~~~~~~--~~~r~l~G~~~-a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 71 MFIANGIKLLGCLLMLFGIHP--LLAYGLVGIGA-AAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777776665554443332 22222233333 3334454555555 5558999999999999999999999999999
Q ss_pred hccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 394 LEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
.+.. +...+.+.+...+++.+....++
T Consensus 148 ~~~~------------~~~~~~i~~~~~~~~~~~~~~l~ 174 (393)
T PRK11195 148 ADPH------------AEAALAVCALIYLLAALFNLFIP 174 (393)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHhcCC
Confidence 8843 66666666655555544444443
No 188
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.30 E-value=8e-11 Score=105.70 Aligned_cols=279 Identities=12% Similarity=0.074 Sum_probs=167.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccc----cCchHHHHHH-HHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK----IGGRKVLLFS-FVL 83 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~l~~~-~~~ 83 (439)
..++.++...+...+....--...+++.+++|++....+.+--..-+...+.+|+.|..+|| |||||.++.. ...
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 33344444444444444444556777888999999999999999999999999999999995 8988877664 555
Q ss_pred HHHHHhhhcCCcchH-----------------HHHHHHHHHHhhhcccchhhHHHHhhhccCCcccch-hhHHHhhhhhH
Q 013609 84 WSSTCFWLKLDPNNV-----------------FILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSR-SVSLTTSGMYL 145 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~-----------------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~ 145 (439)
.+++.++.+++. ++ .+++++--+.-++.-.....+.+++.|...++++.+ +.+.+.....+
T Consensus 112 i~~~l~Lig~aa-Dig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 112 IAVSLFLIGYAA-DIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHhhhhhHh-hhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 666777777764 32 334444445555666778889999999998777666 99999999999
Q ss_pred HHHHHhhhhhhhhcccCCchh--HHHHhHHHHHHHHHHhhh-------ccCCCC--CCCCCCCcccccCccCcccchhhh
Q 013609 146 GAAMGMLFLPSLVKYNGPNSV--FNAEAALGGMWSLLWFKY-------ATDPPR--SEHPKASAAGFGESLLPMRDQKVK 214 (439)
Q Consensus 146 g~~~g~~~~~~l~~~~~wr~~--f~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 214 (439)
|..+|..++++ .+|+-. |......-+.+..+-..+ ..++-. +..++.+........ +.+
T Consensus 191 GnvLGY~~g~y----~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~---~~~--- 260 (498)
T KOG0637|consen 191 GNVLGYALGSY----LGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTA---RSK--- 260 (498)
T ss_pred cceeeeecccc----cCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccc---ccc---
Confidence 99999988874 345432 322222222222111111 111111 100000000000000 000
Q ss_pred hccccccccccCchHHhhh--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCccccc----------------c
Q 013609 215 VDNGGSAMKAAKIPWKRIV--VNLPVWAIVVNNFTFHYALYVLMNWLPTYFEL-GLQLSLQEM----------------G 275 (439)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~----------------~ 275 (439)
..+..........+ ..|..+.+++...+.+.+++.+..+...++-+ +++-++... .
T Consensus 261 -----~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~ 335 (498)
T KOG0637|consen 261 -----SSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGC 335 (498)
T ss_pred -----ccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccch
Confidence 00000000111122 24678889999999999999999888888743 444433221 1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 013609 276 SSKMMPYLNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 276 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 303 (439)
+=+.++.+...+.+....++.||+|.|+
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~ 363 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRK 363 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcce
Confidence 2234555666677777888899998554
No 189
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.30 E-value=2.3e-11 Score=117.74 Aligned_cols=164 Identities=15% Similarity=0.064 Sum_probs=109.9
Q ss_pred hhHHHHHHHHHhhCCCccchhh------------hhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCC
Q 013609 27 GFSIAYTAAADAAGVNQSSKGT------------ILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLD 94 (439)
Q Consensus 27 ~~~~~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 94 (439)
......|.+.++.|.+..+.+. ......++..++.++.++++||+|||++++++..+.+++..+.++.
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3344467777788876543221 1233445566688889999999999999988887777666555432
Q ss_pred cc---hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc----------c
Q 013609 95 PN---NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY----------N 161 (439)
Q Consensus 95 ~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------~ 161 (439)
.+ +...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|..++|.+.+.+.+. .
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 465 (502)
T TIGR00887 386 YNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGI 465 (502)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccc
Confidence 10 1111111111122222234566777889999999999999999999999999999999988773 3
Q ss_pred CCchhHHHHhHHHHHHHHHHhhhccCCCCC
Q 013609 162 GPNSVFNAEAALGGMWSLLWFKYATDPPRS 191 (439)
Q Consensus 162 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 191 (439)
++...|++.+++.++..+.. ++.||++.+
T Consensus 466 ~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~ 494 (502)
T TIGR00887 466 WMGHVLEIFALFMFLGILFT-LLIPETKGK 494 (502)
T ss_pred cchHHHHHHHHHHHHHHHHh-eEeccCCCC
Confidence 45667888877777655544 466775543
No 190
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.28 E-value=1.1e-10 Score=109.65 Aligned_cols=163 Identities=13% Similarity=0.036 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHH
Q 013609 246 FTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIA 325 (439)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (439)
.+...........+|.+.++ +|.|+.+.++..+...++..++.++.|+++||++||+ .+..+..+..++
T Consensus 18 ~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~----------~~~~~~~~~~~~ 86 (394)
T PRK11652 18 AVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP----------VILVGMSIFILG 86 (394)
T ss_pred HHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH----------HHHHHHHHHHHH
Confidence 33334444444556766655 8999999999999999999999999999999999998 777777777777
Q ss_pred HhhhcccCChhHHHHHHHHHHHhhhccccccccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCC
Q 013609 326 LMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDL 404 (439)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 404 (439)
.+.....++.+.......+.....+...+.......+. ++++++.+.+..+....++..++|.+.+.+.+..
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------- 159 (394)
T PRK11652 87 TLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF------- 159 (394)
T ss_pred HHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 76666655554443333222222222222222333443 4478999999999999999999999999998876
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHH
Q 013609 405 SSPESWRAVFFIPGLLCILSSFVFLL 430 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
+|+..|.+.++..++..+....
T Consensus 160 ----g~~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK11652 160 ----GWRACYLFLLLLGAGVTFSMAR 181 (394)
T ss_pred ----ChHHHHHHHHHHHHHHHHHHHH
Confidence 7999998887766554444333
No 191
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.28 E-value=1.1e-10 Score=110.00 Aligned_cols=159 Identities=14% Similarity=0.070 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhc
Q 013609 251 ALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALP 330 (439)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (439)
....+...+|.+.++ +|.|+.+.+...+...++..++.++.|.++||++||+ .+..+.....++.+...
T Consensus 28 ~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~----------~l~~~~~~~~~~~~~~~ 96 (406)
T PRK15402 28 ANDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRP----------VMLAGVAFFILTCLAIL 96 (406)
T ss_pred hhhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH----------HHHHHHHHHHHHHHHHH
Confidence 334444556655554 8999999999999999999999999999999999999 77777777777776666
Q ss_pred ccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCccc
Q 013609 331 IFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPES 409 (439)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~ 409 (439)
..++.+.......+.....+...+.......+ .++++|.+..++......++..++|.+.+.+.+.. +
T Consensus 97 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-----------~ 165 (406)
T PRK15402 97 LAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-----------P 165 (406)
T ss_pred HHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----------C
Confidence 66555443333222222222222233333344 45578889999998888899999999999998876 8
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 013609 410 WRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
|+..+++.+++.+++.+.....
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~ 187 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRA 187 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh
Confidence 9999988888877766654443
No 192
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.28 E-value=4.2e-09 Score=97.34 Aligned_cols=367 Identities=10% Similarity=0.007 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCC-ccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHh
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAADAAGVN-QSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCF 89 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s-~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 89 (439)
...+...+++...+.-+.....|.+..+..-+ ---.+...-.-.+...+.++..|.+.||..|.++...+.+.--++..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 34567788888888888999999888777432 22233333344556678889999999999999988776554322211
Q ss_pred hh----c--CC--cc------hHHHHHHHHHHHhhhcc-cchhhHHHHhhhcc------CCcccchhhHHHhhhhhHHHH
Q 013609 90 WL----K--LD--PN------NVFILVVARLLVGVSQG-FIFPSIHTVLAQWV------PPHERSRSVSLTTSGMYLGAA 148 (439)
Q Consensus 90 ~~----~--~~--~~------~~~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~g~~ 148 (439)
+. . +. +. ....+++.-.+.|.-.- .......+.=.||. +++++.+..+...-.--+.-+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 11 1 11 10 11222222222222111 11122222234553 234456666666667777889
Q ss_pred HHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhc----cCCCCCCCCCCCcccccCccCc----ccchhhhhccccc
Q 013609 149 MGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYA----TDPPRSEHPKASAAGFGESLLP----MRDQKVKVDNGGS 220 (439)
Q Consensus 149 ~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 220 (439)
++|++.|.+.+..+.+....+.++..++..++-+++. +..|+-..++.+.++...++.+ ............+
T Consensus 164 laPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (432)
T PF06963_consen 164 LAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWN 243 (432)
T ss_pred HHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHH
Confidence 9999999999988888888877777776554433322 2223211111111111100000 0000000000011
Q ss_pred cccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 013609 221 AMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLI 300 (439)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 300 (439)
..++...+|+..+++|.+.......++ ++...++......|+.. .|+++...|..-+...+.++.+..+.+++.+|+|
T Consensus 244 ~~~~~~~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riG 321 (432)
T PF06963_consen 244 PLRTIIRGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIG 321 (432)
T ss_pred HHHHHhccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 122334567777777766555444444 44455677888889988 5999999999999999999999999999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHH----HHHhhhcccCCh--hHHHHHHHHHHHhh-----hcccccccccccccCCChhh
Q 013609 301 TKRILSVTRTRKFLNTVGFMVAS----IALMALPIFRSS--NGAIFCSSIALGFL-----ALGRAGFAVNHMDIAPRYAG 369 (439)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 369 (439)
..+ .-..+..... .+...+....++ ......++.+.... ++-........+++++++||
T Consensus 322 lvr----------~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg 391 (432)
T PF06963_consen 322 LVR----------AGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERG 391 (432)
T ss_pred chh----------hHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhh
Confidence 887 3333333222 222222222222 22222222222222 22233445566667778999
Q ss_pred HHHHHHHHHhhhhHHHHHHH
Q 013609 370 IVMGISNTAGTLAGIVGVDM 389 (439)
Q Consensus 370 ~~~g~~~~~~~~g~~i~~~~ 389 (439)
+.+|+-+..+++...+.-.+
T Consensus 392 ~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 392 AVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887765444
No 193
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.27 E-value=5.3e-11 Score=111.12 Aligned_cols=158 Identities=19% Similarity=0.173 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 013609 252 LYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI 331 (439)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (439)
.......+|.+.++ +|.|+.+.+...+...++..++.++.|++.||++||+ .+..+.++.+++......
T Consensus 7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~----------~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKP----------VILGGTLVFALAAVACAL 75 (377)
T ss_pred HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChH----------HHHHHHHHHHHHHHHHHH
Confidence 34455677788776 8999999999999999999999999999999999988 788888888887777776
Q ss_pred cCChhHHHHHHHHHHHhhhccccccccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccc
Q 013609 332 FRSSNGAIFCSSIALGFLALGRAGFAVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESW 410 (439)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~ 410 (439)
.++.........+.....+...+.......+. ++|+|+++.++.+....+|..++|.+.+.+.+.. +|
T Consensus 76 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----------~~ 144 (377)
T PRK11102 76 AQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-----------SW 144 (377)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------Ch
Confidence 66555444433332222232333334444444 4578999999999999999999999999999877 79
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 013609 411 RAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+..+.+.+.+.++..+.....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 145 HAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999988887777665554443
No 194
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.26 E-value=3.3e-11 Score=112.44 Aligned_cols=165 Identities=16% Similarity=0.141 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHH
Q 013609 245 NFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASI 324 (439)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (439)
+++.+.....+....|.+. +.+|.|+.+.+++.+...++..++.++.|+++||++||+ .+..+..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~----------~~~~~~~~~~~ 72 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLV-EEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRV----------FLPIGLILCAI 72 (379)
T ss_pred hhHHHHhHHhhhhhhHHHH-HHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCee----------hhHHHHHHHHH
Confidence 3445555666666777654 458999999999999999999999999999999999999 88888888888
Q ss_pred HHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccC-CChhhHHHHHHHHHhhhhHHHHHH-HHHHhhcccccccc
Q 013609 325 ALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVD-MTGKLLEAAKTTYS 402 (439)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~-~~g~l~~~~~~~~~ 402 (439)
+.++....++.+.......+.....+...+.......+.. +++|+++.++.+....+|..++|. +.+.+.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----- 147 (379)
T TIGR00881 73 VNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY----- 147 (379)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-----
Confidence 8877777766555444433333333444445555555544 478999999999999999999995 555555554
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 403 DLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+|+..|.+.+++.++..+..+..
T Consensus 148 ------~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 148 ------SWHWVFIVPGIIAIIVSLICFLL 170 (379)
T ss_pred ------CchhHHHHHHHHHHHHHHHHhee
Confidence 78999888877766655555443
No 195
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.25 E-value=6.5e-11 Score=110.95 Aligned_cols=153 Identities=15% Similarity=0.061 Sum_probs=118.1
Q ss_pred hhhHHHHHHHHHhhCCCccchhhhhhhhhh-hhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc------CCcchH
Q 013609 26 VGFSIAYTAAADAAGVNQSSKGTILSTFYY-GYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK------LDPNNV 98 (439)
Q Consensus 26 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~------~~~~~~ 98 (439)
.......+.+.+|.|.+++++|++...... ...++.++.|++.||+|+|+.+..+..+.++...... ..+ +.
T Consensus 225 ~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~ 303 (390)
T TIGR02718 225 VSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAP-GI 303 (390)
T ss_pred HHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCC-cH
Confidence 333445566667889999999999888764 6667789999999999999999887766533322221 122 44
Q ss_pred HHHHHHHHHHhhhcccchhhHHHHhhhccCC-cccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHH
Q 013609 99 FILVVARLLVGVSQGFIFPSIHTVLAQWVPP-HERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMW 177 (439)
Q Consensus 99 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~ 177 (439)
..+.....+.+++.+...+...+...+..++ +++++.+++.+...++|..++|.++|.+.+..|++..|++.+++.++.
T Consensus 304 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 304 AVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 4555566677777787778888888777776 789999999999999999999999999999999999999887766654
Q ss_pred HH
Q 013609 178 SL 179 (439)
Q Consensus 178 ~~ 179 (439)
.+
T Consensus 384 ~~ 385 (390)
T TIGR02718 384 IL 385 (390)
T ss_pred HH
Confidence 43
No 196
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.24 E-value=9.8e-11 Score=99.83 Aligned_cols=179 Identities=19% Similarity=0.141 Sum_probs=133.7
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHH
Q 013609 7 RYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSS 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 86 (439)
||..+......+...+ ..+.++...|++.+.+|+|.+|...+.+...+|..+ .++.|.+.||+|+|.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4665555555554444 567888899999999999999999999999999987 58889999999999999999999998
Q ss_pred HHhhhcCCc------chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc
Q 013609 87 TCFWLKLDP------NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY 160 (439)
Q Consensus 87 ~~~~~~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 160 (439)
|.....++- .++|.+.+..++.|.+.+.....+.....+.|| ++||++.|+.-...+++..+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 887665431 167888888888888877777777777778887 6899999999999999988877766666554
Q ss_pred cCCchhHHHHhHHHHHHHHHHhhhccCCC
Q 013609 161 NGPNSVFNAEAALGGMWSLLWFKYATDPP 189 (439)
Q Consensus 161 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 189 (439)
+-..-+++.+....+..+....+.++.|
T Consensus 158 -~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 158 -DPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred -ChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 3223334444444443333434444443
No 197
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.24 E-value=2.5e-10 Score=107.61 Aligned_cols=154 Identities=12% Similarity=0.089 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccC
Q 013609 254 VLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFR 333 (439)
Q Consensus 254 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (439)
....-+|... +.+|.+..+.+...+...++..+++++.|.++||+|||+ .+..+..+..++.+.....+
T Consensus 34 ~~~p~l~~i~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~----------~l~~~~~~~~~~~~~~~~a~ 102 (413)
T PRK15403 34 LIQPGIINVV-RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRP----------VLITGALIFTLACAATLFTT 102 (413)
T ss_pred hhccCHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH----------HHHHHHHHHHHHHHHHHHcC
Confidence 3334445544 448999999999999999999999999999999999999 77888888888777777776
Q ss_pred ChhHHHHHHH-HHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccch
Q 013609 334 SSNGAIFCSS-IALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWR 411 (439)
Q Consensus 334 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 411 (439)
+....+..-+ .+.+.. ...+.......|..| ++++++.++.+....++..++|.+.+.+.+.. +|+
T Consensus 103 ~~~~l~~~r~l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-----------gw~ 170 (413)
T PRK15403 103 SMTQFLIARFIQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-----------HWK 170 (413)
T ss_pred CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CHH
Confidence 6655444322 233222 222233344555544 68899999999999999999999999988876 899
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 013609 412 AVFFIPGLLCILSSFVFLL 430 (439)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~ 430 (439)
..|++.++..+++.+..+.
T Consensus 171 ~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988887777665443
No 198
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.22 E-value=3e-11 Score=115.13 Aligned_cols=147 Identities=13% Similarity=0.022 Sum_probs=115.2
Q ss_pred HHHHHHHhhhhhHHHHHHHHHh-hCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCc
Q 013609 17 STCVCYIERVGFSIAYTAAADA-AGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDP 95 (439)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 95 (439)
..++............+.+.++ ++ ++.+.+++.+...++..++.+++++++||+|||+++..+..+.+++.+...+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~ 308 (437)
T TIGR00792 230 AYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG 308 (437)
T ss_pred HHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc
Confidence 3333333333333334444333 33 556677888888999999999999999999999999999988888877776654
Q ss_pred chHHHHHHHHHHHhhhcccchhhHHHHhhhccC-------CcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCc
Q 013609 96 NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVP-------PHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPN 164 (439)
Q Consensus 96 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr 164 (439)
++.+.+++..++.|++.+...+...++++|..+ ++++|...|+.+....+|..+++.+.+.+.+..|+.
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 309 SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 367777888889999999899999999998865 456799999999999999999999999998877764
No 199
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.21 E-value=2.7e-10 Score=107.20 Aligned_cols=148 Identities=14% Similarity=0.086 Sum_probs=108.4
Q ss_pred HHHHHHhhCCCccchhhhhhhhh-hhhhhhcccccccccccCchHHHHHHHHHHHHHHhhh---cCCcchHHHHHHHHH-
Q 013609 32 YTAAADAAGVNQSSKGTILSTFY-YGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWL---KLDPNNVFILVVARL- 106 (439)
Q Consensus 32 ~~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~r~- 106 (439)
.+.+.+++|.++++.+++.+... .+..++.++.|++.||+|||+.+..+..+..+..+.. ++.+++.+.+++.-+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 34566779999999999987654 5688999999999999999998887776665554333 344335566555543
Q ss_pred ---HHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhh
Q 013609 107 ---LVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFK 183 (439)
Q Consensus 107 ---l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 183 (439)
..|++.+...+....++.+.+|.+++ ++.+...++|..+++.++|.+.+.+||+..|.+.+.++++..++...
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 45566666677777777777775544 55555667788777778999999999999999988888776555543
No 200
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.20 E-value=1.2e-10 Score=106.57 Aligned_cols=179 Identities=12% Similarity=0.081 Sum_probs=138.2
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhh
Q 013609 231 RIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRT 310 (439)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 310 (439)
+++.++....+.+.......+...+.+++=-++++ .|..+..-|......-.+.++.-++.+++.+|+|+-+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~------- 437 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN------- 437 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc-------
Confidence 56777777777777777777777777888777777 6766666777777777888888999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHH-hhhhHHHHHH
Q 013609 311 RKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTA-GTLAGIVGVD 388 (439)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~-~~~g~~i~~~ 388 (439)
++..++.....=++.+....++|..+..=++-....+..+.....+... .||+.++++.++.... -.+|-.+|..
T Consensus 438 ---v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl 514 (618)
T KOG3762|consen 438 ---VMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL 514 (618)
T ss_pred ---eeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence 8899999999988888888888877766665555545445555555555 5668999999998665 4578899999
Q ss_pred HHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 389 MTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 389 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+.|.+.+.. +-+..|..+++.+++.++....+
T Consensus 515 IGG~~v~~f-----------g~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 515 IGGFVVERF-----------GARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hhhhhheee-----------hhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998 77888888887777766655443
No 201
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.19 E-value=5.4e-10 Score=106.16 Aligned_cols=156 Identities=15% Similarity=0.065 Sum_probs=100.7
Q ss_pred hhhhHHHHHHH-HHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhh----cCCcchHH
Q 013609 25 RVGFSIAYTAA-ADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWL----KLDPNNVF 99 (439)
Q Consensus 25 ~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~----~~~~~~~~ 99 (439)
.+......|.+ .+++|.+..+.+...+...+...+++++.|+++||+|||+.+.++.++.++..... .... +..
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 337 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVS-SPY 337 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCC-cHH
Confidence 33444556664 45689998899998988888888999999999999999998877665443332211 1122 333
Q ss_pred HHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhH-HHHHHhhhhhhhhcccC-CchhHHHHhHHHHHH
Q 013609 100 ILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYL-GAAMGMLFLPSLVKYNG-PNSVFNAEAALGGMW 177 (439)
Q Consensus 100 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~ 177 (439)
..+..-.+.+++.+...+....+.+|++|+|.|+.++|+.+....+ .....|.+.+.+ +..| |...++..++..++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~ 416 (432)
T PRK10406 338 AAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVA 416 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHH
Confidence 2222222233333334456678889999999999999998875443 344477777755 4345 555566555555554
Q ss_pred HHHHh
Q 013609 178 SLLWF 182 (439)
Q Consensus 178 ~~~~~ 182 (439)
.+..+
T Consensus 417 ~~~~~ 421 (432)
T PRK10406 417 FLVSL 421 (432)
T ss_pred HHHHH
Confidence 44444
No 202
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.18 E-value=2.3e-10 Score=108.95 Aligned_cols=175 Identities=17% Similarity=0.128 Sum_probs=157.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccC--chHHHHHHHHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIG--GRKVLLFSFVLWSS 86 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~ 86 (439)
..+....++..+...........+|...++.+.++.+.+.+.++..+...++.+..|+++|+.. ++.+..++++..++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 3556677778888888888899999999999999999999999999999999999999999988 56677888888999
Q ss_pred HHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC-Cch
Q 013609 87 TCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG-PNS 165 (439)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-wr~ 165 (439)
+...+++++ +++.+...-.+.|++.|.........+.|..+.++-..+.|+.....+++..+||++++.+.|..+ |..
T Consensus 378 ~~~~~p~~~-~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 378 ARLFLPFAT-TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 999999997 999999999999999998888888899999999999999999999999999999999999998776 999
Q ss_pred hHHHHhHHHHHHHHHHhhh
Q 013609 166 VFNAEAALGGMWSLLWFKY 184 (439)
Q Consensus 166 ~f~~~~~~~~~~~~~~~~~ 184 (439)
.|+..+...++....++..
T Consensus 457 ~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred ehhhcChHHHHHHHHHHHh
Confidence 9999988877766555433
No 203
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.18 E-value=8.7e-08 Score=89.81 Aligned_cols=277 Identities=8% Similarity=-0.024 Sum_probs=167.5
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCC-----Cccchhhhhhhhhhhhhhh-cccccccccccCchHHHHHH
Q 013609 7 RYLIVILTFISTCVCYIERVGFSIAYTAAADAAGV-----NQSSKGTILSTFYYGYACS-QVPGGWAAQKIGGRKVLLFS 80 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----s~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~l~~~ 80 (439)
.+..+....+..|+..++.+..-+ +.+.+.. +.+.+.++-+...+...+. .++.+++++|++|++++-+.
T Consensus 5 E~~k~~~~~l~fF~il~~Y~iLR~----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~ 80 (472)
T TIGR00769 5 ELKKFLPLFLMFFCILFNYTILRD----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTV 80 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHH
Confidence 344455555666666665554444 4444433 4467889988887777666 89999999999999999887
Q ss_pred HHHHHHHHhhhcCC----cch--------------------------HHHHHHHHHHHhhhcccchh-hHHHHhhhccCC
Q 013609 81 FVLWSSTCFWLKLD----PNN--------------------------VFILVVARLLVGVSQGFIFP-SIHTVLAQWVPP 129 (439)
Q Consensus 81 ~~~~~~~~~~~~~~----~~~--------------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~ 129 (439)
...+.....++++. ++. .|...+.-+...+-...... .-..+..|.++.
T Consensus 81 ~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~ 160 (472)
T TIGR00769 81 ISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTI 160 (472)
T ss_pred HHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 76666555554443 101 23333444444444444444 677889999999
Q ss_pred cccchhhHHHhhhhhHHHHHHhhhhhhhhcc-------c-CCc----hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCC
Q 013609 130 HERSRSVSLTTSGMYLGAAMGMLFLPSLVKY-------N-GPN----SVFNAEAALGGMWSLLWFKYATDPPRSEHPKAS 197 (439)
Q Consensus 130 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------~-~wr----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (439)
+|-.|..++++.+.++|..+++.+..++.+. . .|. ..+.+.++.+.+.. .+.+...+....++...+
T Consensus 161 ~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~-~~~~~l~~~~~~~~~~~~ 239 (472)
T TIGR00769 161 DEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAII-LLYWWVNRNVLTDPRSYN 239 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccCCccccc
Confidence 9999999999999999999999988887631 1 232 12233333333322 233333222211100000
Q ss_pred cccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccc---
Q 013609 198 AAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEM--- 274 (439)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--- 274 (439)
.++ ..++++.+.+..+.++.++|+|-++.+++...+++...+.+....-...++.+- |+.+-
T Consensus 240 ~~~--------------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f 304 (472)
T TIGR00769 240 PAL--------------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAF 304 (472)
T ss_pred hhh--------------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHH
Confidence 000 000111223345677888999988888888888877777776655566666442 33222
Q ss_pred -chhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 013609 275 -GSSKMMPYLNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 275 -~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 303 (439)
|.+....++..++.+++.+++.+|+|-+.
T Consensus 305 ~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~ 334 (472)
T TIGR00769 305 MGDFSTWTGVVSVTMMLLSGNVIRKYGWLT 334 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 33444455556666666788888887765
No 204
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=6.9e-10 Score=99.18 Aligned_cols=176 Identities=15% Similarity=0.128 Sum_probs=125.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN 315 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 315 (439)
|+++...+.....+..++.+.... ..+++.+|+|+.|.+++.++..+.+.+.++..|.+.||+|.|+ ..
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~-~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~----------~~ 82 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLG-VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRK----------WT 82 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchH----------HH
Confidence 344444444444444444433333 3444669999999999999999999999999999999999999 88
Q ss_pred HHHHHHHHHHHhhhcccCChh--HHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHH
Q 013609 316 TVGFMVASIALMALPIFRSSN--GAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGK 392 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 392 (439)
..+.++..+..+...+....+ +.+...-+..+..+............ .|||++|.+.|+.. .+|+|..+...+...
T Consensus 83 ~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~ 161 (417)
T COG2223 83 ILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL 161 (417)
T ss_pred HHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH
Confidence 888888777777766654333 22333333333334333333344444 56689999999998 999999999999999
Q ss_pred hhccccccccCCCCccc---chhHHHHHHHHHHHHHHHHHHhccC
Q 013609 393 LLEAAKTTYSDLSSPES---WRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 393 l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
+.... + |+.+..+.....++..+..++..++
T Consensus 162 v~~~~-----------g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 162 VAVAF-----------GFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHH-----------hhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 98887 4 8888888888887777776665543
No 205
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.17 E-value=1.7e-09 Score=101.61 Aligned_cols=180 Identities=13% Similarity=0.099 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHH
Q 013609 238 VWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTV 317 (439)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 317 (439)
++.++...+...+.........|.+ ++.+|.+..+.+++.+...++..++++..|++.||+|+|+ .+..
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~----------~~~~ 73 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKA----------GILL 73 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH----------HHHH
Confidence 4555666666666665556777766 5559999999999999999999999999999999999999 8888
Q ss_pred HHHHHHHHHhhhccc---CChhHHHHH-HHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHh
Q 013609 318 GFMVASIALMALPIF---RSSNGAIFC-SSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKL 393 (439)
Q Consensus 318 ~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 393 (439)
+..+.+++.+.+... ++.+..+.. ++.+.+.+..............+++++++..++.+...++|..++|.+.+.+
T Consensus 74 g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 74 GLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887765432 233333332 2333333333322223333344557899999999999999999999999988
Q ss_pred hcccccccc-C--------------CCCcccchhHHHHHHHHHHHHHHHH
Q 013609 394 LEAAKTTYS-D--------------LSSPESWRAVFFIPGLLCILSSFVF 428 (439)
Q Consensus 394 ~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
......... + .....+|+.+|.+.+++.++..++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 154 ILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 643211000 0 0012368899988887766654444
No 206
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.15 E-value=4.6e-10 Score=100.33 Aligned_cols=152 Identities=20% Similarity=0.204 Sum_probs=128.7
Q ss_pred HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhccc
Q 013609 35 AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGF 114 (439)
Q Consensus 35 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 114 (439)
-.+++|++..|...+.-...+..+++++++|++.||+|.|+++..+.++..+.++..-+.. .-..+.+.-.+.|...|.
T Consensus 279 g~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~-~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 279 GAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE-GELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc-ccHHHHHHHHHHHHhcch
Confidence 3459999999999999999999999999999999999999999999999999888777775 566677777899999999
Q ss_pred chhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC-CchhHHHHhHHHHHHHHHHhhhccCC
Q 013609 115 IFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG-PNSVFNAEAALGGMWSLLWFKYATDP 188 (439)
Q Consensus 115 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~~~~~~ 188 (439)
.+..+.++.++..|++|-++.+|+++...-.+..+||.+-+.+.+..| -|..+....++..+..++. ...|++
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L-~~v~~~ 431 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL-LRVKVP 431 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE-EeecCC
Confidence 999999999999999999999999999999999999999999888543 6766666555544443333 344443
No 207
>PRK10133 L-fucose transporter; Provisional
Probab=99.14 E-value=2.7e-09 Score=101.20 Aligned_cols=146 Identities=16% Similarity=0.171 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 237 PVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
.+..+.+..+...+.........|.+ ++.+|.|+.+.++..+...++..++++..|++.||+|+|+ .+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~----------~l~ 95 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKA----------GII 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH----------HHH
Confidence 34555666677777777778888887 6669999999999999999999999999999999999999 888
Q ss_pred HHHHHHHHHHhhh---cccCChhHHHHHHH-HHHHhhhcccccccccccccCCC-hhhHHHHHHHHHhhhhHHHHHHHHH
Q 013609 317 VGFMVASIALMAL---PIFRSSNGAIFCSS-IALGFLALGRAGFAVNHMDIAPR-YAGIVMGISNTAGTLAGIVGVDMTG 391 (439)
Q Consensus 317 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~~~~~g 391 (439)
.+..+.+++.++. ...++....+...+ .+.+.+... +.......+.+|+ ++...+++.+....+|..++|.+.+
T Consensus 96 ~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~-~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 96 TGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLE-TAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888887664 23444444333333 333333333 3333334456664 5556799999999999999999887
Q ss_pred Hhh
Q 013609 392 KLL 394 (439)
Q Consensus 392 ~l~ 394 (439)
.+.
T Consensus 175 ~l~ 177 (438)
T PRK10133 175 SLI 177 (438)
T ss_pred HHH
Confidence 665
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.14 E-value=6.6e-10 Score=103.12 Aligned_cols=174 Identities=17% Similarity=0.202 Sum_probs=137.1
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhC-CCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAG-VNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK 92 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 92 (439)
..+..++.+.....+....+...+|.| .+.+..+.+.+...++-.+.-...+++..|+|.|+++.++.+.+++=..+.+
T Consensus 212 Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 212 FLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 334455566666667777777788888 6777788888888888999999999999999999999999999998888888
Q ss_pred CCcchHHHHH----HHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhh-hhhHHHHHHhhhhhhhhcccCCc---
Q 013609 93 LDPNNVFILV----VARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTS-GMYLGAAMGMLFLPSLVKYNGPN--- 164 (439)
Q Consensus 93 ~~~~~~~~l~----~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~wr--- 164 (439)
..+++.+... ....++|+..+........++.+..|++.|+++.++++. ..++|..+|..++|++.|++|-+
T Consensus 292 ~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~ 371 (400)
T PF03825_consen 292 YFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMF 371 (400)
T ss_pred HhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhh
Confidence 7732444433 335569999999999999999999999999999999887 67899999999999999976644
Q ss_pred ---hhHHHHhHHHHHHHHHHhhhccC
Q 013609 165 ---SVFNAEAALGGMWSLLWFKYATD 187 (439)
Q Consensus 165 ---~~f~~~~~~~~~~~~~~~~~~~~ 187 (439)
..+.+.+.+.++..++...+.||
T Consensus 372 ~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 372 DWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 45555666555555544444444
No 209
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.14 E-value=4.5e-08 Score=89.00 Aligned_cols=321 Identities=13% Similarity=0.118 Sum_probs=173.3
Q ss_pred hhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccC
Q 013609 49 ILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVP 128 (439)
Q Consensus 49 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 128 (439)
+.-+-.+...+..+.+.+..+|+..+.=...+.+++.++.++.++++ |.+.=+++-++.+++.|........+.+ .++
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~-~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~ 141 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP-SVWVRLLGVVLASLSSGLGEVTFLSLTH-FYG 141 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc-chhHHHHHHHHHhhhhhhhHHHHHHHHH-hcC
Confidence 44455566677777788889998766666677778889999999997 8999999999999999988887777644 565
Q ss_pred CcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC--chhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccC
Q 013609 129 PHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP--NSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLL 206 (439)
Q Consensus 129 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w--r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (439)
+ ...+.++.+.+.++++|+..-..+.+ .++ |..+++...+.++..+..++.+|+++..+..+ +.++..+.+.
T Consensus 142 ~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~-~~~~~~~~~~ 215 (402)
T PF02487_consen 142 K----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQ-ESESEDEAED 215 (402)
T ss_pred c----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCc-ccCCCCcccc
Confidence 3 35788889999999999987766666 554 67777777776665555555555443222111 1111000000
Q ss_pred cccchhhhhccccccccccCchHHhhhc-chhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCcc-cccchhhhhhHH
Q 013609 207 PMRDQKVKVDNGGSAMKAAKIPWKRIVV-NLPVWAIVVNNFTFHYALYVLMN-WLPTYFELGLQLSL-QEMGSSKMMPYL 283 (439)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~~ 283 (439)
+..+. +..+.+.+...+..+++-++ -|.....++-.+..++..+.++. ..|...-..-..++ ++..+....+.+
T Consensus 216 ~~~~~---~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~ 292 (402)
T PF02487_consen 216 DLLES---ETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQL 292 (402)
T ss_pred ccccc---ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHH
Confidence 00000 00000111111222222222 13333334444444555554432 22332211111121 223344455555
Q ss_pred HHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhh---hcccCChhHHHHHHH-HHHHhhhccccccccc
Q 013609 284 NMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMA---LPIFRSSNGAIFCSS-IALGFLALGRAGFAVN 359 (439)
Q Consensus 284 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 359 (439)
+..+++--...+ |+ |+ .+++.+.-.+..+.+++ +.+.++.+..+..++ .+...+.........+
T Consensus 293 GVFISRSS~~~~--ri--r~--------lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I 360 (402)
T PF02487_consen 293 GVFISRSSLPFF--RI--RR--------LWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRI 360 (402)
T ss_pred HHhhhhcceeee--eh--hh--------HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 555554322111 11 11 12222222222222221 112333333333222 2333444445556667
Q ss_pred ccccCCChhhHHHHHHHHHhhhhHHHHHHHHHH
Q 013609 360 HMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGK 392 (439)
Q Consensus 360 ~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 392 (439)
..+.++|+|..++|........|-.++..+.-+
T Consensus 361 ~~~~~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 361 SEEVPPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred HhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 778888999999999998888887777765543
No 210
>TIGR00898 2A0119 cation transport protein.
Probab=99.14 E-value=2.3e-10 Score=111.14 Aligned_cols=139 Identities=13% Similarity=0.056 Sum_probs=109.6
Q ss_pred hhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcch-HHHHHHHHHHHhhhcccchhhHHHHhhhcc
Q 013609 49 ILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNN-VFILVVARLLVGVSQGFIFPSIHTVLAQWV 127 (439)
Q Consensus 49 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 127 (439)
......+....+.++.+++.||+|||+.+.++.++.+++.++..+.+++ .+...+.-++.+++.+...+..+.+..|.+
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3345556677788889999999999999999999988888877776522 245555666777777777888999999999
Q ss_pred CCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccCCCC
Q 013609 128 PPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPR 190 (439)
Q Consensus 128 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~ 190 (439)
|++.|++++|+.+....+|..++|.+.+ + +..++..++.+.+...++..+..+ +.||+..
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 499 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETKG 499 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCCC
Confidence 9999999999999999999999999988 4 345677788888877777666554 4565443
No 211
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.13 E-value=1.2e-09 Score=101.14 Aligned_cols=150 Identities=14% Similarity=0.145 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccC
Q 013609 254 VLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFR 333 (439)
Q Consensus 254 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (439)
.....+|.+.++ +|.|+.+.++..+...++..++.+..|++.||+++|+ .+..+.++..++.... ..+
T Consensus 18 ~~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~----------~~~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 18 SVGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEER----------SVAAGLLLIAAGILIR-SAP 85 (355)
T ss_pred cCcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchH----------HHHHHHHHHHHHHHHH-Hhc
Confidence 344567776665 8999999999999999999999999999999999999 6677776666655554 344
Q ss_pred ChhHHHHHH-HHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchh
Q 013609 334 SSNGAIFCS-SIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRA 412 (439)
Q Consensus 334 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~ 412 (439)
+....+... +.+.+... ..+.......+..|++|+++.+..+....+|..+++.+.+.+.+..+ .+|+.
T Consensus 86 ~~~~l~~~~~~~g~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~---------~~w~~ 155 (355)
T TIGR00896 86 GTALLFAGTALIGVGIAI-INVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSG---------GHWQQ 155 (355)
T ss_pred cHHHHHHHHHHHHHHHHH-HhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------hhHHH
Confidence 444333222 22333222 22333444566667899999999999999999999999998887651 13888
Q ss_pred HHHHHHHHHHHHH
Q 013609 413 VFFIPGLLCILSS 425 (439)
Q Consensus 413 ~~~~~~~~~~~~~ 425 (439)
.|...++..++..
T Consensus 156 ~f~~~~~~~~~~~ 168 (355)
T TIGR00896 156 ALAWWALPALLAL 168 (355)
T ss_pred HHHHHHHHHHHHH
Confidence 8877666554443
No 212
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.13 E-value=6.4e-10 Score=87.69 Aligned_cols=136 Identities=18% Similarity=0.263 Sum_probs=97.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccc
Q 013609 277 SKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGF 356 (439)
Q Consensus 277 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (439)
......++..++.+..+++.||++||+ ....+.....++.+.....++.+.......+.....+...+..
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 72 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKP----------VLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAG 72 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhH----------HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhH
Confidence 445667888999999999999999998 6677776666666666555554444333333222223333444
Q ss_pred ccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 357 AVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 357 ~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
.....|. ++++|+++.++.+...+++..++|.+.+.+.+.. +|+..+.+.+...+++.+......+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 73 AALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL-----------GWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-----------chHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4444454 5578999999999999999999999999998876 7888888888877777666665544
No 213
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.12 E-value=3.4e-10 Score=103.20 Aligned_cols=150 Identities=11% Similarity=0.085 Sum_probs=130.9
Q ss_pred CCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHH
Q 013609 41 VNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIH 120 (439)
Q Consensus 41 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 120 (439)
.++...|.+.+...+.-++...+..++.+|+|.|+.++++..+.++=...+++++ +.+.+.+.+.+.|+-.+.......
T Consensus 256 ~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~-~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 256 QGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT-NPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456689999999999999999999999999999999999999999999999997 999999999999999999999999
Q ss_pred HHhhhccCCcccchhhHHH-hhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCC
Q 013609 121 TVLAQWVPPHERSRSVSLT-TSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRS 191 (439)
Q Consensus 121 ~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 191 (439)
.++++.+|+|..++...+. +...++|..+.+.++|.+.|+.|.+..|++.+.+.++..++..+.++++++.
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 9999999988877887774 6799999999999999999999999999999999888888877777655543
No 214
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.11 E-value=1.5e-09 Score=101.03 Aligned_cols=187 Identities=18% Similarity=0.166 Sum_probs=142.2
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
..|+.....+.+......-+.+........+-++-|.+..+..+..........+..+++..+.||+|||+.++.+..+.
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLM 345 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 34444444444444444444556666677888999999999999999999999999999999999999999999999998
Q ss_pred HHHHhhhcCCcc--hHH------HHHHHHHHHhhhccc-chhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhh
Q 013609 85 SSTCFWLKLDPN--NVF------ILVVARLLVGVSQGF-IFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLP 155 (439)
Q Consensus 85 ~~~~~~~~~~~~--~~~------~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 155 (439)
.+.++++..... +.. ..+++.++..++.+. ..|...-+.+|.+|++.|+.++++......+...+-...-.
T Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp 425 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFP 425 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877665421 111 123343333333222 45888999999999999999999999988888887777777
Q ss_pred hhhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCCC
Q 013609 156 SLVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSE 192 (439)
Q Consensus 156 ~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (439)
.+.+..|- ..|.+..+++.+..+..++..||++.+.
T Consensus 426 ~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 426 PLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 77776676 7888888899999999999999987654
No 215
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.11 E-value=2.6e-09 Score=98.32 Aligned_cols=162 Identities=12% Similarity=-0.002 Sum_probs=118.6
Q ss_pred HHHHHHHHHHhhCCcccc-cchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCC
Q 013609 256 MNWLPTYFELGLQLSLQE-MGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRS 334 (439)
Q Consensus 256 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (439)
..+...++.+.+|++..+ .|.+......+..+..+.+|+++||+|.|+ ++..+.+...+...+.++.++
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~----------vL~l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP----------VLVLQALSFVCVWLLLLLGTS 114 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH----------HHHHHHHHHHHHHHHHHHHHH
Confidence 344445666679999999 999999999999999999999999999999 888888888888888877655
Q ss_pred hhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHH
Q 013609 335 SNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVF 414 (439)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 414 (439)
.....+.=++.+..-+...........-+|+++|+++.|+.+....+|.++++++.+.+. .. +-..|....
T Consensus 115 l~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~--------gWr~y~~Ln 185 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TL--------GWISYSTLN 185 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc--------CchhHHHHH
Confidence 544444433333333333333334444466689999999999999999999999999943 44 112455555
Q ss_pred HHHHHHHHHHHHHHHHhccCCc
Q 013609 415 FIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
++......++.++.+++++.+|
T Consensus 186 ~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 186 IISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHHHHHhCCCCch
Confidence 6666666777777777775544
No 216
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.10 E-value=1.7e-08 Score=93.19 Aligned_cols=358 Identities=11% Similarity=0.040 Sum_probs=205.3
Q ss_pred CCchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCc-----cchhhh-hhhhhhhhhhhcccccccccccCchHHH
Q 013609 4 FPKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQ-----SSKGTI-LSTFYYGYACSQVPGGWAAQKIGGRKVL 77 (439)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~-----~~~g~~-~s~~~~~~~~~~~~~g~l~dr~Grr~~l 77 (439)
+++....+..+..+..+.......-..+.+.+.+..+-.. ...|.. .++-.....+..++.+.+.|+.|.|+.+
T Consensus 4 ~~~~~~~v~~lg~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~l 83 (461)
T KOG3098|consen 4 RRFELLNVLMLGFGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWAL 83 (461)
T ss_pred ccchhheeeehhhhHHHHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHH
Confidence 3344444445555555555555555666666555443221 123333 6677777889999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhh
Q 013609 78 LFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSL 157 (439)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 157 (439)
.++...+..-....-+- |-+.+++...+.|+|.+..+..--.+++|..++|++.+..++..+....+..+|..+...+
T Consensus 84 v~ga~~y~~f~~gfl~~--N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 84 VIGATCYAAFPLGFLFP--NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred HHHhHHHHHHHHHHHhc--chHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 99999998887766654 6788889999999999999999999999999999999999999888888888887664443
Q ss_pred hccc--------CCc-h----------hHHHHhHHHHHHHHHH--hhhccCCCCCCCCCCCcccccCccCcccchhhhhc
Q 013609 158 VKYN--------GPN-S----------VFNAEAALGGMWSLLW--FKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVD 216 (439)
Q Consensus 158 ~~~~--------~wr-~----------~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (439)
.... +-+ . ...+.+++..+..+.. ..+.|.+......+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~~~------------------- 222 (461)
T KOG3098|consen 162 FQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVVNCKSSS------------------- 222 (461)
T ss_pred eEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchhhhhhhc-------------------
Confidence 3211 111 1 1111111111111111 1111111111000000
Q ss_pred cccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc---cchhhhhhHHHHHHHHHHHH
Q 013609 217 NGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQE---MGSSKMMPYLNMFIFSNIGG 293 (439)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~g 293 (439)
+....+......+++++|+...+....+..+....-.....|.-+.-....+.+. .+......+++.+++....+
T Consensus 223 --~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~ 300 (461)
T KOG3098|consen 223 --ETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFS 300 (461)
T ss_pred --cccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHH
Confidence 0001111122345677888877777766666665556666666554332222222 23333445566666666666
Q ss_pred HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc-CCh----------------hHHHHHHHHHHHhh-hccccc
Q 013609 294 VVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIF-RSS----------------NGAIFCSSIALGFL-ALGRAG 355 (439)
Q Consensus 294 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~~-~~~~~~ 355 (439)
.+.+|..+.. ++..+.++..+..+..++.... +.. .......-+..|+. ......
T Consensus 301 ~l~~rir~fg-------~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~ 373 (461)
T KOG3098|consen 301 ILSKRIRGFG-------RKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQ 373 (461)
T ss_pred HHhhhhhhcc-------cCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHH
Confidence 6666654433 2335555555544444433221 100 01111111122222 233344
Q ss_pred ccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHH
Q 013609 356 FAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTG 391 (439)
Q Consensus 356 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g 391 (439)
.......+.|++|..+.++.-.-..++..++-...+
T Consensus 374 ~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 374 RYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 456666777999999999888888887777655544
No 217
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.09 E-value=9.1e-10 Score=117.86 Aligned_cols=148 Identities=14% Similarity=0.175 Sum_probs=123.9
Q ss_pred hHHHHHH-HHHhhCCCcc-chhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHH
Q 013609 28 FSIAYTA-AADAAGVNQS-SKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVAR 105 (439)
Q Consensus 28 ~~~~~~~-i~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r 105 (439)
....+|. +.+++|.+.. +.+++.+...++..++.++.|+++||+++|+.+.++.++.+++.++..+.. +.+.+++..
T Consensus 251 ~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 329 (1146)
T PRK08633 251 AQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP-SLASVLVLF 329 (1146)
T ss_pred HHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh-hHHHHHHHH
Confidence 3344454 4567899988 999999999999999999999999999999999999888888888888886 888888999
Q ss_pred HHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc-ccCCchhHHHHhHHHHH
Q 013609 106 LLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK-YNGPNSVFNAEAALGGM 176 (439)
Q Consensus 106 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~wr~~f~~~~~~~~~ 176 (439)
++.|++.+...+...+++.+..|+++||+++++.+....+|..+++.+++.+.. ..++...|++.+.+.++
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999999999889999999999999999999999999999999888888776654 23455556655554443
No 218
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.07 E-value=1.8e-10 Score=103.88 Aligned_cols=178 Identities=18% Similarity=0.146 Sum_probs=138.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 237 PVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
....+++.......--+.+....+.. ++.+|.++...|++.....+...+++++.|++.||+.|++ ++.
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v-~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~----------v~~ 102 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEV-QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR----------VIA 102 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHH-HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcce----------EEe
Confidence 34455566666666656665555544 3448999999999999999999999999999999999999 888
Q ss_pred HHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 317 VGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
+|..+-.++.+...+....+..+++=.+.........+.......|..| ++|+++.++.+....+|..+|-...+.+.+
T Consensus 103 vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~ 182 (493)
T KOG1330|consen 103 VGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS 182 (493)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc
Confidence 8888888888888777555555555444333334445666666777666 699999999999999999999888888888
Q ss_pred cccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 396 AAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
.. ..|++.|...+++.++..++.+++.+++
T Consensus 183 ~~----------~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 183 LT----------FWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred Cc----------cceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 77 3599999999999988888777766553
No 219
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.07 E-value=1.8e-09 Score=97.24 Aligned_cols=157 Identities=16% Similarity=0.141 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHH---hhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHH
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAAD---AAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSST 87 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 87 (439)
.....+..++..........-.+.+.+ ++|.++++.+...+.+..+..++.+..+++.||+|+||.+.++..+..++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 333445555544344455555555554 36899999999999999999999999999999999999999888888877
Q ss_pred HhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhH
Q 013609 88 CFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVF 167 (439)
Q Consensus 88 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f 167 (439)
.++....+ +... ...-.+.|++.+..+|...+...+..|+ +.+++.++. ....+|..+.|++.|.+.|..|.+..|
T Consensus 222 ~~l~~~~~-~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~ 297 (310)
T TIGR01272 222 SIGAALTH-GYVA-MWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAF 297 (310)
T ss_pred HHHHHHcC-CHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHH
Confidence 76666554 3332 2355588999999999999999998864 455666765 566789999999999999989988888
Q ss_pred HHHh
Q 013609 168 NAEA 171 (439)
Q Consensus 168 ~~~~ 171 (439)
++..
T Consensus 298 ~v~~ 301 (310)
T TIGR01272 298 ALPV 301 (310)
T ss_pred HHHH
Confidence 7544
No 220
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.07 E-value=1e-09 Score=117.12 Aligned_cols=160 Identities=11% Similarity=0.071 Sum_probs=124.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHH-HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCC
Q 013609 16 ISTCVCYIERVGFSIAYTAAA-DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLD 94 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 94 (439)
++.+...+....+....|.+. +.+|.++.+.|++.+.+.++..++.++.|+++||.++++.+..+.++.+++.+..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (1140)
T PRK06814 232 LGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFA 311 (1140)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhc
Confidence 333333333344444566654 4579999999999999999999999999999999888777666666655555433332
Q ss_pred --------------------cchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhh
Q 013609 95 --------------------PNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFL 154 (439)
Q Consensus 95 --------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 154 (439)
+ +.+.+++.-++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 312 SSSVPAEPAQLKSILVFLSKR-HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred ccccccccccccchhhhhccc-ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH
Confidence 4 6778888899999999999999999999999999999999999999999999999999
Q ss_pred hhhhc-ccCCchhHHHHhHHHHH
Q 013609 155 PSLVK-YNGPNSVFNAEAALGGM 176 (439)
Q Consensus 155 ~~l~~-~~~wr~~f~~~~~~~~~ 176 (439)
+.+.+ ..+....+++.+...++
T Consensus 391 g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 391 ALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHhccCHHHHHHHHHHHHHH
Confidence 88874 45666666655554444
No 221
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.04 E-value=4.1e-09 Score=95.34 Aligned_cols=163 Identities=28% Similarity=0.417 Sum_probs=133.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhCCCc--cchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhh
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAGVNQ--SSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWL 91 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 91 (439)
.....+....+........+.+.++++.+. .+.++..+.+.++..++.++.|.++||+|||+.+..+......+.+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 86 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL 86 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH
Confidence 344445555777788888888888888766 488999999999999999999999999999988888887666666777
Q ss_pred cCCcc-hHHHHHHHHHHHhhhcccchhhHHHHhhhccCC-cccchhhHHHhh-hhhHHHHHHhhhhhhhhcc--cCCchh
Q 013609 92 KLDPN-NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPP-HERSRSVSLTTS-GMYLGAAMGMLFLPSLVKY--NGPNSV 166 (439)
Q Consensus 92 ~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~~wr~~ 166 (439)
++..+ +.+.+++.|..+|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... .+||..
T Consensus 87 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T COG0477 87 ALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAA 166 (338)
T ss_pred HhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 77752 499999999999999999999999999999987 688999999888 5888889998777776654 579987
Q ss_pred HHHHhHHHHH
Q 013609 167 FNAEAALGGM 176 (439)
Q Consensus 167 f~~~~~~~~~ 176 (439)
|.........
T Consensus 167 ~~~~~~~~~~ 176 (338)
T COG0477 167 FLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHH
Confidence 7666655543
No 222
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.04 E-value=6.1e-10 Score=98.34 Aligned_cols=147 Identities=20% Similarity=0.150 Sum_probs=118.9
Q ss_pred hCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHH
Q 013609 267 LQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIAL 346 (439)
Q Consensus 267 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (439)
.+-+..+.|++++...+.+++.+++.|.+.||+|+|- .+.+|+.++....+++.+.++.+..+..=.+-.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~i----------pm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQg 170 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKI----------PMVAGLFVMFLSTILFAFGNSYPMLFVARSLQG 170 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhcccc----------HHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhh
Confidence 4456778899999999999999999999999999999 899999999999999999877765544433322
Q ss_pred HhhhcccccccccccccCC--ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHH
Q 013609 347 GFLALGRAGFAVNHMDIAP--RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILS 424 (439)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
....+....-....++..| ++|++++|+.-.+..+|-.+||++.|.++|.. |++.+|+++++++++.
T Consensus 171 vgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-----------Gk~aPFlVL~~v~Lld 239 (464)
T KOG3764|consen 171 VGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-----------GKSAPFLVLAIVLLLD 239 (464)
T ss_pred hhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-----------CCcCcHHHHHHHHHHH
Confidence 2223333333444455555 36899999999999999999999999999998 8999999999999988
Q ss_pred HHHHHHhccC
Q 013609 425 SFVFLLFSTG 434 (439)
Q Consensus 425 ~~~~~~~~~~ 434 (439)
..+.++..+.
T Consensus 240 ~~L~l~vi~p 249 (464)
T KOG3764|consen 240 GALQLLVIEP 249 (464)
T ss_pred HHHHHheeCc
Confidence 8877776554
No 223
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.00 E-value=8.3e-08 Score=94.19 Aligned_cols=154 Identities=17% Similarity=0.192 Sum_probs=125.2
Q ss_pred HHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccc-cCchHHHHHHHHHHHHHHhhhcCCcc-------hHHH
Q 013609 29 SIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK-IGGRKVLLFSFVLWSSTCFWLKLDPN-------NVFI 100 (439)
Q Consensus 29 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~-------~~~~ 100 (439)
......+.+.+|.++++...+...+....-+.+.++|.++|+ +||++.+.++.++..+|.++.+++.. ....
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 344445566789999999999999999999999999999997 59999999999999999888776421 1234
Q ss_pred HHHHHHHHhhhcccchhhHHHHhhhccCCc---ccchhhHHHhhhhhHHHHHHhhhhhhhhcc-------cCCchhHHHH
Q 013609 101 LVVARLLVGVSQGFIFPSIHTVLAQWVPPH---ERSRSVSLTTSGMYLGAAMGMLFLPSLVKY-------NGPNSVFNAE 170 (439)
Q Consensus 101 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------~~wr~~f~~~ 170 (439)
.+++-.+..+|.|+.-|...+...|.++++ +|-+.+.++..+.++|..+++.+.+++.+. .+|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 667778888999999999999999999754 367788999999999999999999888743 3699999998
Q ss_pred hHHHHHHHHHHh
Q 013609 171 AALGGMWSLLWF 182 (439)
Q Consensus 171 ~~~~~~~~~~~~ 182 (439)
++..++..+...
T Consensus 168 ~i~m~ia~lvf~ 179 (654)
T TIGR00926 168 AILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHH
Confidence 888777655544
No 224
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.99 E-value=1e-08 Score=86.38 Aligned_cols=157 Identities=17% Similarity=0.119 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHH-
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSST- 87 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~- 87 (439)
+.+.+++..+.+..+.....++ ...++.+|+|+.+.+.+.+.-..-.++.+++.|.++||+|++-..+.+..+..+.
T Consensus 267 w~~~iicv~yyva~fPFi~lg~--~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~ 344 (459)
T KOG4686|consen 267 WVLVIICVLYYVAWFPFITLGP--MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLG 344 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHH
Confidence 3444455555444443333222 2367899999999999999988999999999999999999998877765554443
Q ss_pred HhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC---Cc
Q 013609 88 CFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG---PN 164 (439)
Q Consensus 88 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~---wr 164 (439)
-....|+ ++.=.+.-.+.|...+.........++...|+++.|++.|..+...++|..+-|++++.+.++-| |-
T Consensus 345 H~~l~Ft---~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~l 421 (459)
T KOG4686|consen 345 HSGLFFT---FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNL 421 (459)
T ss_pred hhhHHhh---hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhH
Confidence 3333332 22334566777887776655577788888999999999999999999999999999999998544 44
Q ss_pred hhHHHH
Q 013609 165 SVFNAE 170 (439)
Q Consensus 165 ~~f~~~ 170 (439)
-.|.+.
T Consensus 422 e~ffl~ 427 (459)
T KOG4686|consen 422 EAFFLI 427 (459)
T ss_pred HHHHHH
Confidence 444443
No 225
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.99 E-value=5e-09 Score=95.98 Aligned_cols=182 Identities=16% Similarity=0.161 Sum_probs=140.9
Q ss_pred hhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CcccccchhhhhhHHHHHHHHHHHHHHHHHh-hhccc
Q 013609 231 RIVVN-LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQ----LSLQEMGSSKMMPYLNMFIFSNIGGVVADHL-ITKRI 304 (439)
Q Consensus 231 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~ 304 (439)
..+++ |.++.+...-+.--+++|++...+-.|+....+ +|++++..++..+....-...+++|+++||+ |+|+
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~- 93 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR- 93 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-
Confidence 44554 456777778888899999999999999988888 9999988877777777778889999999995 6666
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhhcccC--ChhH-HHHHHHHHHHhhhcccccccccccccC-C--ChhhHHHHHHHHH
Q 013609 305 LSVTRTRKFLNTVGFMVASIALMALPIFR--SSNG-AIFCSSIALGFLALGRAGFAVNHMDIA-P--RYAGIVMGISNTA 378 (439)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~g~~~~~ 378 (439)
.+..+.++.+++.+++.... .... .+...++..+. +..=+..+....+.. | .+|-.++++..+.
T Consensus 94 ---------tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~-Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~ 163 (498)
T COG3104 94 ---------TIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGT-GLFKPNISSLLGELYPKDDPRRDGGFTLFYMG 163 (498)
T ss_pred ---------HHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcc-ccccccHHHHHHHhcCCCCcccCCCccEEEEE
Confidence 88889999999998888774 2333 33333333333 333344455555443 3 2488889999999
Q ss_pred hhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 379 GTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 379 ~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
.++|+.++|.+.+++.++. +|+..|...++-..++.+.++..+|.
T Consensus 164 iNiGsl~~p~i~~~~~~~~-----------g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 164 INIGSLIAPIITGLLAINY-----------GWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred eehHHHHHHHHHHHHHHhh-----------CHHHHHHHHHHHHHHHHHHHHHccch
Confidence 9999999999999999998 89999999999999999988887754
No 226
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.98 E-value=3.8e-09 Score=101.51 Aligned_cols=147 Identities=16% Similarity=0.238 Sum_probs=106.6
Q ss_pred hhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc--CChhHHHHHHH
Q 013609 266 GLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIF--RSSNGAIFCSS 343 (439)
Q Consensus 266 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 343 (439)
.++++..+.|.+.+...++..+++++.|++.||+++|+ .+..+.++..+..++.... .+....+..-+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~----------~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 139 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKW----------SIGIGMFLSSVISIVIPWAAGGGIALVVFCRV 139 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcch----------hhHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 46788889999999999999999999999999999999 7777777666665554332 22222222222
Q ss_pred HHHHhhhccccccccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHH
Q 013609 344 IALGFLALGRAGFAVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCI 422 (439)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (439)
+.....+...+.......+. ++++|+++.|+.+....+|..++|.+.+.+.+.. .+|+..|++.++..+
T Consensus 140 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~----------~gw~~~f~i~~~~~~ 209 (465)
T TIGR00894 140 IQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW----------GGWPMIFYVFGIVGC 209 (465)
T ss_pred HHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCCCeehhhhhHHHH
Confidence 22222233334444455554 4589999999999999999999999999998873 279999999888777
Q ss_pred HHHHHHHHhc
Q 013609 423 LSSFVFLLFS 432 (439)
Q Consensus 423 ~~~~~~~~~~ 432 (439)
+..++.+...
T Consensus 210 ~~~~~~~~~~ 219 (465)
T TIGR00894 210 AWSLLWFVFP 219 (465)
T ss_pred HHHHHHHHHh
Confidence 6666555543
No 227
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.98 E-value=1.2e-08 Score=100.85 Aligned_cols=173 Identities=16% Similarity=0.099 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhc
Q 013609 251 ALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALP 330 (439)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (439)
...++....-.-++++++++..+.|++.+...++..++.++.+++.||.+||+ .+.++.++.+++.+++.
T Consensus 47 ~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~----------~i~~g~ll~~lg~ll~a 116 (633)
T TIGR00805 47 LYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI----------VIGIGCAIMGLGSFLLS 116 (633)
T ss_pred HHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce----------EEEecHHHHHHHHHHHh
Confidence 33344433333445569999999999999999999999999999999999999 77777777777776654
Q ss_pred ccC-------------------------------------------------C-hhHHHHHHHHHHHhh-hccccccccc
Q 013609 331 IFR-------------------------------------------------S-SNGAIFCSSIALGFL-ALGRAGFAVN 359 (439)
Q Consensus 331 ~~~-------------------------------------------------~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 359 (439)
..+ + ....+...-+..|.+ +...+....+
T Consensus 117 lphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~ 196 (633)
T TIGR00805 117 LPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISY 196 (633)
T ss_pred ChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchh
Confidence 431 0 011111111122221 2223334455
Q ss_pred cccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccc---------cCCC--CcccchhHHHHHHHHHHHHHHH
Q 013609 360 HMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTY---------SDLS--SPESWRAVFFIPGLLCILSSFV 427 (439)
Q Consensus 360 ~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
..|. ++++|+...|+.+....+|..+|+.+.+.+.+...... ++.+ ..+.|+..|++.+++.++..+.
T Consensus 197 i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 197 IDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred hhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554 55899999999999999999999999999886542110 0000 1124677788887777766655
Q ss_pred HHHhcc
Q 013609 428 FLLFST 433 (439)
Q Consensus 428 ~~~~~~ 433 (439)
.+.+++
T Consensus 277 l~~~p~ 282 (633)
T TIGR00805 277 FFFFPK 282 (633)
T ss_pred HHhCcc
Confidence 555543
No 228
>PTZ00207 hypothetical protein; Provisional
Probab=98.98 E-value=2.2e-08 Score=96.53 Aligned_cols=156 Identities=13% Similarity=0.172 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 013609 252 LYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI 331 (439)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (439)
.+.+..+.|.. ++.+|+|..+.+.+..... ......+..|++.||+|+|+ ++.++.++..++.++.+.
T Consensus 43 ~y~fsv~s~~L-~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~----------vllig~ll~~iG~ll~al 110 (591)
T PTZ00207 43 MYAFNLISGAM-QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRP----------IFVLSMTVFCLGTLLFAL 110 (591)
T ss_pred HHHHHHHHHHH-HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHH----------HHHHHHHHHHHHHHHHHH
Confidence 34555556654 5569999999988776533 33355667899999999999 888888888888877776
Q ss_pred c------CChhHHHHHH-HHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCC
Q 013609 332 F------RSSNGAIFCS-SIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDL 404 (439)
Q Consensus 332 ~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 404 (439)
. ++.+...+.. +.+.+..... +.......+.+|++||.+.|+......+|+++.+.+...+.+ .
T Consensus 111 a~~~~i~~s~~~l~l~r~l~G~G~~~~~-~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~------- 181 (591)
T PTZ00207 111 TFQEVIEGSVVRLSVYNGLMTLGCMLFD-LGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-D------- 181 (591)
T ss_pred HhcccccCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-------
Confidence 4 2333222222 2232222222 223334455678999999999999999999875555555544 2
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 405 SSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
+++..|++.+++.++..++...+.
T Consensus 182 ----~~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 182 ----NTSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHhhe
Confidence 456677777766666555554443
No 229
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.95 E-value=1.4e-08 Score=94.00 Aligned_cols=166 Identities=14% Similarity=0.101 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHh-----hhccccchhhhhHHHHHHHHHHHHHHHhh
Q 013609 254 VLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHL-----ITKRILSVTRTRKFLNTVGFMVASIALMA 328 (439)
Q Consensus 254 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (439)
......|.+.++ .|.|..+.+..... .+...+ .++.|.+.||+ |||| .++..+.+..++....
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~---------~~l~~~~~~~~~~~~~ 73 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRR---------SWLVLTQVLLLSLLLI 73 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccH---------HHHHHHHHHHHHHHHH
Confidence 345567888887 79999999987544 344443 88999999998 4444 3445555555555444
Q ss_pred hcccCC---hhHHHHHHHHHHHhhhcccccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCC
Q 013609 329 LPIFRS---SNGAIFCSSIALGFLALGRAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDL 404 (439)
Q Consensus 329 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~ 404 (439)
+.+.++ .+......++.........+.......| .++|+|+.+.|+.....++|..+++.+.+.+.+..+..+
T Consensus 74 l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~--- 150 (356)
T TIGR00901 74 LSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANT--- 150 (356)
T ss_pred HHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccc---
Confidence 444422 1112222112222222233344444445 456899999999999999999999999999888762100
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 405 SSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
....+|+..|++.++..+++.+..++..++
T Consensus 151 ~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 151 GLITLWGYIFFWTALLILPGLLVTLFLAKE 180 (356)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHhccC
Confidence 112349999998888777766655544333
No 230
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.95 E-value=2.4e-08 Score=94.16 Aligned_cols=189 Identities=11% Similarity=0.049 Sum_probs=125.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHH----hhhccccchhhhhH
Q 013609 237 PVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADH----LITKRILSVTRTRK 312 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~ 312 (439)
++..+....+..++++.....+++.|+++ +|.+....+.+.....+..++..++.|+++|| +|||+
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr--------- 74 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR--------- 74 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH---------
Confidence 34455666666778888888889988876 89999999999999999999999999999995 88777
Q ss_pred HHHHHHHHHHHHHHhhhcccCChh-------------HH----HHHHHHHHHhhhcccccccccccccCC-Chh--hHHH
Q 013609 313 FLNTVGFMVASIALMALPIFRSSN-------------GA----IFCSSIALGFLALGRAGFAVNHMDIAP-RYA--GIVM 372 (439)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~ 372 (439)
..+..+.....+.+.++++.++.. .. +..+.+.-.......+...+...|..| ++| +.+.
T Consensus 75 p~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~ 154 (477)
T TIGR01301 75 PFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIAN 154 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHH
Confidence 344445666666666665543311 11 111111111222222333455556554 433 6899
Q ss_pred HHHHHHhhhhHHHHHHHHHHh--hcccccc--ccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 373 GISNTAGTLAGIVGVDMTGKL--LEAAKTT--YSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 373 g~~~~~~~~g~~i~~~~~g~l--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
++.+...++|+.+++.+.+.. .+..+-. .....-..+++..|++.+++.+++.+...+..||+
T Consensus 155 ~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 155 AYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 999999999999999988865 2211100 00111223788899999988888888887766554
No 231
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.91 E-value=5.4e-09 Score=87.26 Aligned_cols=344 Identities=16% Similarity=0.147 Sum_probs=182.0
Q ss_pred HHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcc
Q 013609 34 AAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQG 113 (439)
Q Consensus 34 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 113 (439)
.+-++++....|+|.+.-...-..++...+.|.++|+-|||+.-+.-++-+.+.++ .-.++ +|-.++++|++-|+..+
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSp-qYkVLmVGR~LGGiaTs 139 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSP-QYKVLMVGRVLGGIATS 139 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCC-ceEEEeehhhhhhHHHH
Confidence 34456788888999988888888889999999999999999988777777666654 45676 89999999999999998
Q ss_pred cchhhHHHH-hhhccCCcccchhhHHHh--------hhhhHHHHHHhhhhhhhhccc--CCchhHHHHhHHHHHHHHHHh
Q 013609 114 FIFPSIHTV-LAQWVPPHERSRSVSLTT--------SGMYLGAAMGMLFLPSLVKYN--GPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 114 ~~~~~~~~~-i~~~~~~~~r~~~~~~~~--------~~~~~g~~~g~~~~~~l~~~~--~wr~~f~~~~~~~~~~~~~~~ 182 (439)
....+--++ ++|.. ++|+.---+.. .++.+-.+++.+.+..+.+.+ |.-.+|-..+....+...+.+
T Consensus 140 LLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil 217 (454)
T KOG4332|consen 140 LLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL 217 (454)
T ss_pred HHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH
Confidence 887777776 45654 33442222211 233444455555666666644 444555544333222222222
Q ss_pred hhccCCCCCCCCCCCcccccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHH-HHHHH
Q 013609 183 KYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLM-NWLPT 261 (439)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 261 (439)
.--.|.-.+..++. .-.++.+...+.+..|+++..+.-+..+....++.+. .|.|.
T Consensus 218 ~~W~ENygdps~~k-----------------------dlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPa 274 (454)
T KOG4332|consen 218 SSWSENYGDPSENK-----------------------DLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 274 (454)
T ss_pred hhhhhccCChhhhH-----------------------HHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeeccc
Confidence 11111111110000 1112233344556677777665555555444444433 33332
Q ss_pred HHHHhhCCcccc--cchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhc----ccC--
Q 013609 262 YFELGLQLSLQE--MGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALP----IFR-- 333 (439)
Q Consensus 262 ~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-- 333 (439)
. .-++.+ -|.+++...+.+++|+-+..++..|-..|. + ..+.+.+.+....+.+.. ..+
T Consensus 275 L-----spn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~v---e-----~ymqivf~vs~a~l~Lpilt~~vsP~k 341 (454)
T KOG4332|consen 275 L-----SPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKV---E-----SYMQIVFLVSIAALLLPILTSSVSPSK 341 (454)
T ss_pred C-----CCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCccc---c-----hHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 2 111222 366666666777777766665554433332 1 133333333333332221 112
Q ss_pred -ChhHHHHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccch
Q 013609 334 -SSNGAIFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWR 411 (439)
Q Consensus 334 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 411 (439)
++...++.++..=.+.+...|...-.-..+-| +.|++.+-+...--++-..+ .+++.... ..+.+-+
T Consensus 342 es~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvCl------vLynlh~~-----~~p~~tr 410 (454)
T KOG4332|consen 342 ESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCL------VLYNLHVD-----AFPTTTR 410 (454)
T ss_pred CCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhh------hheecccc-----cCccccc
Confidence 22333444444434445555555555444444 67876554443332222222 12221110 0123455
Q ss_pred hHHHHHHHHHHHHHHHH
Q 013609 412 AVFFIPGLLCILSSFVF 428 (439)
Q Consensus 412 ~~~~~~~~~~~~~~~~~ 428 (439)
..|-++..+..++.+..
T Consensus 411 ~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 411 NMFGICSAFLFVASILQ 427 (454)
T ss_pred hhhhhhHHHHHHHHHHH
Confidence 67777777776665544
No 232
>PRK09848 glucuronide transporter; Provisional
Probab=98.90 E-value=3.1e-09 Score=101.51 Aligned_cols=148 Identities=15% Similarity=0.065 Sum_probs=110.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHH-HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCC
Q 013609 16 ISTCVCYIERVGFSIAYTAAA-DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLD 94 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 94 (439)
+..++............|.+. +.+|.++...++......++..++.++++++.||+|+|+++.++.++..++.+...+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~ 314 (448)
T PRK09848 235 IGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV 314 (448)
T ss_pred HHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 333334444344444455443 3456555444444444467788899999999999999999999998888887777665
Q ss_pred c-chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCc-------ccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 95 P-NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPH-------ERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 95 ~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
+ ++++.+.+..++.|+|.+...+...++.+|..|.+ ++|...+..+....+|..+|+.+.+.+.+..|+
T Consensus 315 ~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 315 SVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3 26777778888999999999999999999988754 358899999999999999999999888765555
No 233
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.89 E-value=6.1e-08 Score=92.95 Aligned_cols=176 Identities=11% Similarity=0.066 Sum_probs=115.0
Q ss_pred hhcchhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccch
Q 013609 232 IVVNLPVWAIVVNNFTFHY----ALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSV 307 (439)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 307 (439)
.+++|+++..+....+... ........++...++ .|-+ ....++.....+...+..++.|+++|.+|||.
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~---- 109 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY---- 109 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchH----
Confidence 3456666655443333322 222223445555555 6765 44557777888899999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhcccccccccccccCC-ChhhHHHHHHHHHhhhhHHHH
Q 013609 308 TRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVG 386 (439)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~ 386 (439)
..+.+.++..++.++....++....+....+.....+.... ......|..| +.|..+.++.....-....++
T Consensus 110 ------~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~ 182 (599)
T PF06609_consen 110 ------FFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWIS 182 (599)
T ss_pred ------HHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence 99999999999999998888776666554443332333222 2333455444 788887776665544444566
Q ss_pred HHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 387 VDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 387 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
|.+...+..+. +||+.|++..+...++.+...++
T Consensus 183 ~~ia~~~~~~~-----------~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 183 PLIAQLFAAHS-----------GWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHHHhccCC-----------CcchHHHHHHHHHHHHHHHHHHH
Confidence 66666554443 89999999888777766554443
No 234
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.87 E-value=3.9e-07 Score=80.24 Aligned_cols=360 Identities=12% Similarity=-0.004 Sum_probs=205.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhccccccccc-----ccCchHHHHH---
Q 013609 8 YLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQ-----KIGGRKVLLF--- 79 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~l~~--- 79 (439)
...+..+.+.+.+.+.-.+... .+|.+.+.=|.|.++.+...-++. -....++|.++.| |+||||.-+.
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 3445666677888888888777 899998877888887765433321 1234578899999 9999986543
Q ss_pred ---HHHHHHHHHhhh------cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHH
Q 013609 80 ---SFVLWSSTCFWL------KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMG 150 (439)
Q Consensus 80 ---~~~~~~~~~~~~------~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 150 (439)
|.++..++.-.- +-.+ +...+...-++.-+..+.-..+.-.+.-....+++.|-+......+.+.|..++
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p-~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLP-NVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCc-chHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 444333332211 1122 444444444556666676777777787778888888887777777777777766
Q ss_pred hhhhhhhhc-------ccCCc---------hhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhh
Q 013609 151 MLFLPSLVK-------YNGPN---------SVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVK 214 (439)
Q Consensus 151 ~~~~~~l~~-------~~~wr---------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (439)
..+--.+.. ..+|. .-.++.+.+.++...+..+..+|.+++..++ +
T Consensus 186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e----~-------------- 247 (510)
T KOG3574|consen 186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEE----L-------------- 247 (510)
T ss_pred cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhh----h--------------
Confidence 654333322 11232 2344555666665556655554444331110 0
Q ss_pred hccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHH
Q 013609 215 VDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGV 294 (439)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 294 (439)
+...++...-++++++-|.+...+......-.++.+-....+.-+.| .|.+..+.+.+..+..-.+++. +.
T Consensus 248 ----~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l----~~ 318 (510)
T KOG3574|consen 248 ----ELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIAL----PL 318 (510)
T ss_pred ----hcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhh----hh
Confidence 01112222344677888888888888888888888888888888888 7999888877665444444444 44
Q ss_pred HHHHhhhccccchhhhhHHHHHHHHHHHHHH-HhhhcccCC----hh-HHHHHHHHHHH----hhh-ccccccccccccc
Q 013609 295 VADHLITKRILSVTRTRKFLNTVGFMVASIA-LMALPIFRS----SN-GAIFCSSIALG----FLA-LGRAGFAVNHMDI 363 (439)
Q Consensus 295 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~-~~~~~~~~~~~----~~~-~~~~~~~~~~~~~ 363 (439)
...|+..++.......|....-+........ ....+.... .. ...++.+.... +.. .............
T Consensus 319 ~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqis 398 (510)
T KOG3574|consen 319 YIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQIS 398 (510)
T ss_pred hheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcC
Confidence 4444433221112222222222222222211 111111111 01 11111111111 111 1112222233445
Q ss_pred CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccc
Q 013609 364 APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAK 398 (439)
Q Consensus 364 ~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 398 (439)
+|...|+.+.+.|+..++|+---..+..++.|...
T Consensus 399 dp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 399 DPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred CcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 67889999999999999999888888888888654
No 235
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.85 E-value=8.5e-09 Score=90.23 Aligned_cols=131 Identities=15% Similarity=0.113 Sum_probs=100.4
Q ss_pred hhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcc-h--HHHHHHHHHHHhhhcccchhhHHHHhhhccC
Q 013609 52 TFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPN-N--VFILVVARLLVGVSQGFIFPSIHTVLAQWVP 128 (439)
Q Consensus 52 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 128 (439)
+.++.-..|.++.+.+.||+|||+.|..+.+++++..++...+.. | -.++..+|++ .++.+.+.+.|..|.+|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~araf----isg~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAF----ISGAFQVAYVYTPEVYP 464 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH----HhchheEEEEecCcccc
Confidence 345567788899999999999999999999999998887766642 2 2233455554 44456677899999999
Q ss_pred CcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccCC
Q 013609 129 PHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATDP 188 (439)
Q Consensus 129 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~ 188 (439)
.+-|+...|..+...-+|.++.|.++ +....+-..+..+.+...++..+...+++-|+
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999999998 33334555667777777777777766664443
No 236
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.84 E-value=2.1e-08 Score=95.26 Aligned_cols=153 Identities=12% Similarity=0.138 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW 90 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 90 (439)
...+.+..++............+.+.++.--+++..+.+..+..++..++.+++++++||+|+|+.+..+..+.+++.++
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~ 306 (428)
T PF13347_consen 227 FRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLL 306 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHH
Confidence 33445556666666666676777766664334577888888999999999999999999999999999999999999988
Q ss_pred hcCCc-chHHHHHHHHHHHhhhcccchhhHHHHhhhccCC-------cccchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 91 LKLDP-NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPP-------HERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 91 ~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
..+.+ +|.+.+++.-++.|++.+...+...++++|..+. ++.|...|..+....+|..+++.+.+.+.+..|
T Consensus 307 ~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 307 LFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 87774 4899999999999999999999999999998873 345888999999999999999999888876554
Q ss_pred C
Q 013609 163 P 163 (439)
Q Consensus 163 w 163 (439)
+
T Consensus 387 y 387 (428)
T PF13347_consen 387 Y 387 (428)
T ss_pred c
Confidence 4
No 237
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.84 E-value=6e-09 Score=100.10 Aligned_cols=148 Identities=14% Similarity=0.026 Sum_probs=109.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcC--
Q 013609 16 ISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKL-- 93 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-- 93 (439)
...++............+.+.++..-+++..+++.+...++..++.+++++++||+|+|+.+.++..+..++.+...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~ 317 (473)
T PRK10429 238 GMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMG 317 (473)
T ss_pred HHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444444444445555555544445566777777777889999999999999999999999888776655544321
Q ss_pred --CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccC-------CcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 94 --DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVP-------PHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 94 --~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
.+++.+.+++.-++.|++.+...+...++++|..+ +++.|..++......-+|..+++.+.+.+.+..|+
T Consensus 318 ~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 318 LAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22367777788888999999999999999999965 23345588999999999999999999998875555
No 238
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.82 E-value=1.2e-08 Score=93.69 Aligned_cols=147 Identities=16% Similarity=0.168 Sum_probs=132.4
Q ss_pred HHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhccc
Q 013609 35 AADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGF 114 (439)
Q Consensus 35 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 114 (439)
-.+|++..+.-.|........+-.+.-++.+++.+|+|+-+++..++.+..+=.+.....+ |.|+.+-..+++|+..+.
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~-n~W~vLPieilqgit~al 475 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ-NPWMVLPIEILQGITHAL 475 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc-CchheeeHHHHHHHHHHH
Confidence 3577787777788777778888888889999999999999999999999999999999997 999999999999999999
Q ss_pred chhhHHHHhhhccCCcccchhhHHHhh-hhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHh
Q 013609 115 IFPSIHTVLAQWVPPHERSRSVSLTTS-GMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 115 ~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 182 (439)
.+.+..+++++..||+-|..+.++.+. ..++|--+|.+++|.+.+.++=|..|.+.++.+++..++..
T Consensus 476 iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 476 IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999876 78899999999999999999999999999888877655443
No 239
>PRK09669 putative symporter YagG; Provisional
Probab=98.80 E-value=4.2e-08 Score=93.63 Aligned_cols=176 Identities=12% Similarity=0.078 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHH
Q 013609 246 FTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIA 325 (439)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (439)
+..+........+++.|+.+++|+++.++|.+..+.-+...+..++.|+++||.+.|. .+||+.+..+.+..++.
T Consensus 19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-----Grrrp~il~~~~~~~i~ 93 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-----GQFRPYLLWFAIPFGVV 93 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-----CCcchhHHHHHHHHHHH
Confidence 3444555667888999999999999999999999999999999999999999965443 22334565565555555
Q ss_pred HhhhcccCC---h---hHHHH-HHHHHHHhhhcccccccccccccC--CChhhHHHHHHHHHhhhhHHHHHHHHHHhhcc
Q 013609 326 LMALPIFRS---S---NGAIF-CSSIALGFLALGRAGFAVNHMDIA--PRYAGIVMGISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 326 ~~~~~~~~~---~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
..+....++ . .+... ..+...+... ......+...|.. +++|.+.++......++|+.+++.+...+...
T Consensus 94 ~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~-~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~ 172 (444)
T PRK09669 94 CLLTFYTPDFGATGKIIYACVTYILLSLVYTA-INVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDI 172 (444)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHh-hcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333322 1 11111 1222222322 2233444455543 37899999999999999998888776666554
Q ss_pred ccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 397 AKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
.+.++ ...+|+..+.+.+++.++..+..+..
T Consensus 173 ~~~~~----~~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 173 LGKGD----EQKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred hCCCc----hhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 42111 11367777777777766665554444
No 240
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.78 E-value=1.8e-08 Score=96.23 Aligned_cols=125 Identities=14% Similarity=0.109 Sum_probs=110.7
Q ss_pred HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCC----------cchHHHHHHHHH
Q 013609 37 DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLD----------PNNVFILVVARL 106 (439)
Q Consensus 37 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~ 106 (439)
+++|.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++....... + +.+..+..-+
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~-~~~~~~~~~~ 359 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGIS-DEVFVLGDSI 359 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCC-CeeeeeehhH
Confidence 4689999999999999999999999999999999999999999999999888654311 3 4445666778
Q ss_pred HHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 107 LVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 107 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
+.+++.+........++.+..|+++++...++.+...++|..+++.+++.+.++.|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88999898889999999999999999999999999999999999999999988766
No 241
>PRK11462 putative transporter; Provisional
Probab=98.77 E-value=1.6e-07 Score=89.73 Aligned_cols=181 Identities=10% Similarity=0.047 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHH
Q 013609 244 NNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVAS 323 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (439)
.-+..+..+.....|+..|+.+..|+++..+|.+..+.-+...+.-++.|.++||...|. .+|++.+..+.+..+
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~-----Gr~rp~il~g~i~~~ 91 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRW-----GKFRPWVLFGALPFG 91 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCC-----CCcchhHhHHHHHHH
Confidence 334455666777789999999999999999999999999999999999999999876554 334556666766666
Q ss_pred HHHhhhcccCC--hh----HHHH-HHHHHHHhhhcccccccccccccC--CChhhHHHHHHHHHhhhhHHHHHHHHHHhh
Q 013609 324 IALMALPIFRS--SN----GAIF-CSSIALGFLALGRAGFAVNHMDIA--PRYAGIVMGISNTAGTLAGIVGVDMTGKLL 394 (439)
Q Consensus 324 ~~~~~~~~~~~--~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 394 (439)
+...++...+. .. +... ..+...+. ......+.+...|.. +++|++.++......++|+.+++.+...+.
T Consensus 92 i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~-t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv 170 (460)
T PRK11462 92 IVCVLAYSTPDLSMNGKMIYAAITYTLLTLLY-TVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHHHH-HHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555543332 11 1111 11122222 222334444555544 479999999999999999988888877666
Q ss_pred ccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 395 EAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
+..++.+ ...+|.....+.+++.+++..+.+...||
T Consensus 171 ~~~g~~~----~~~g~~~~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 171 NLIGGDN----KPLGFQGGIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred HHhCCCc----hhhhHHHHHHHHHHHHHHHHHHHHhccee
Confidence 5442111 11356666666666665555554443333
No 242
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.76 E-value=1.6e-07 Score=82.58 Aligned_cols=166 Identities=16% Similarity=0.092 Sum_probs=130.2
Q ss_pred HHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhccccccccccc-CchHHHHHHHHHHHHHHhhhcCCcch
Q 013609 19 CVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKI-GGRKVLLFSFVLWSSTCFWLKLDPNN 97 (439)
Q Consensus 19 ~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~ 97 (439)
-+.....+..-.=+|.+..|-|+|..+.|+..+...+......+....+++|. ++|+......+++.++...+.+.|.
T Consensus 218 GlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~- 296 (395)
T COG2807 218 GLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG- 296 (395)
T ss_pred HhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh-
Confidence 33444555666678999999999999999999999999999999999999965 6777778888888888877777763
Q ss_pred HHHHHHHHHHHhhhcccchhhHHHHhhhccCC-cccchhhHHHhhhhhHHHHHHhhhhhhhhccc-CCchhHHHHhHHHH
Q 013609 98 VFILVVARLLVGVSQGFIFPSIHTVLAQWVPP-HERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN-GPNSVFNAEAALGG 175 (439)
Q Consensus 98 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~ 175 (439)
-..++. -++.|+|.|...+.+..++.+..+. ++-++-.++.+....+=...||.+.|++.|.. +|+..++..+...+
T Consensus 297 ~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i 375 (395)
T COG2807 297 QLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATL 375 (395)
T ss_pred hHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHH
Confidence 222222 4899999999999999999998863 44556666666666666778999999998854 69999988888877
Q ss_pred HHHHHHhhhcc
Q 013609 176 MWSLLWFKYAT 186 (439)
Q Consensus 176 ~~~~~~~~~~~ 186 (439)
...+.-+..-|
T Consensus 376 ~m~i~Gl~a~r 386 (395)
T COG2807 376 LMLIFGLRAGR 386 (395)
T ss_pred HHHHHHhhcch
Confidence 77666655443
No 243
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.76 E-value=6.8e-08 Score=83.84 Aligned_cols=383 Identities=11% Similarity=0.047 Sum_probs=219.0
Q ss_pred HhhCCCccch-hhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccc
Q 013609 37 DAAGVNQSSK-GTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFI 115 (439)
Q Consensus 37 ~~~~~s~~~~-g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 115 (439)
.+.|+++.|. .-+.-...-.+.+.-.+.=.+.|..-.|++++.-.+-......+.-+.+ +.+.+-+..+..|...+ .
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~-sV~~mQvlE~FyG~~tA-a 111 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP-SVKAMQVLEFFYGPATA-A 111 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC-CchheeeehhhcChHHH-H
Confidence 3445555443 2222333444555555566789988889988887666666667777776 89999999999998866 5
Q ss_pred hhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC--chhHHHHhHHHHHHHHHHhhhccCCCCCCC
Q 013609 116 FPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP--NSVFNAEAALGGMWSLLWFKYATDPPRSEH 193 (439)
Q Consensus 116 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w--r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (439)
..+.++++-+..+++++.++.+...+..-.|...|..++..+.....+ +..=.+.-.- ..+......++|..+++..
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~-~~ia~~~A~fLP~v~rSl~ 190 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAE-VTIAVLLALFLPRVKRSLY 190 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHH-HHHHHHHHhhCCCCchhhh
Confidence 688889999999999999999999999999999999998888764333 3222222222 2223333345555554332
Q ss_pred CCCCcccccCccCcccchhhh-hccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc
Q 013609 194 PKASAAGFGESLLPMRDQKVK-VDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQ 272 (439)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 272 (439)
-+.++++....+.+....... .+..+........++.+..+||++..-.+-..+..++++-..++.-..-++. .-++.
T Consensus 191 f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~-~~~~~ 269 (433)
T KOG3810|consen 191 FHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEV-APNPA 269 (433)
T ss_pred hhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhh-CCCch
Confidence 211111111000000000000 0000000111123445667788877767777777777777766665555543 21111
Q ss_pred --ccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhh
Q 013609 273 --EMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLA 350 (439)
Q Consensus 273 --~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (439)
-.|..=++..+.++++.+..|.+.-...|. +..++.++.+..+..++.+....+.+...+...+.-....
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~--------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~ 341 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRW--------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQ 341 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchh--------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHh
Confidence 123333445555666667777664333222 2346667777777777777777776666555544433333
Q ss_pred cc-cccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHH
Q 013609 351 LG-RAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFL 429 (439)
Q Consensus 351 ~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (439)
.. ..+......+...|.-|...|+...+.-+-..+-.. .+.|..+.+-+...--.-|..-|.+.+++.+++.....
T Consensus 342 l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~---iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 342 LTITIATFQIARNLSSELFGLVFGINTFVALILQSILTL---IVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred hhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheE---EEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 32 233344556677788899999887765554444333 33443322221111112356678888888888866555
Q ss_pred HhccC
Q 013609 430 LFSTG 434 (439)
Q Consensus 430 ~~~~~ 434 (439)
...++
T Consensus 419 ~~~~~ 423 (433)
T KOG3810|consen 419 LMCRR 423 (433)
T ss_pred HHhhc
Confidence 54443
No 244
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.73 E-value=4.3e-08 Score=86.37 Aligned_cols=115 Identities=18% Similarity=0.139 Sum_probs=89.5
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhh
Q 013609 270 SLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFL 349 (439)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (439)
+..-+|.+-+.+.+...+.++..|.++||+|||. ++.+|.+..++...+.+...+. ..+...=+..|..
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkp----------vll~c~~~va~s~ll~~~S~~F-~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKP----------VLLACLIGVALSYLLWALSRNF-AAFVLARFLGGIF 134 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchH----------HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhc
Confidence 3445688888899999999999999999999999 8999999888888777777665 2222222233333
Q ss_pred hcccccccccccccC-CChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 350 ALGRAGFAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 350 ~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
-.......++..|+. +|+|+.+++.+++..++|-++||.+.|++..
T Consensus 135 kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 135 KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred cCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 333444555666655 5899999999999999999999999999988
No 245
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.71 E-value=1.3e-07 Score=89.08 Aligned_cols=149 Identities=16% Similarity=0.225 Sum_probs=118.0
Q ss_pred hhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChh--HHHHH-H
Q 013609 266 GLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSN--GAIFC-S 342 (439)
Q Consensus 266 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~ 342 (439)
.+++++.+.+++.+....+.+++.+..+++.||+|.|+ +...+.++.+++.++.+...+.. ..+.. +
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~----------v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~ 136 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARR----------VFFISGLISALLTLLTPLAASIGFYLLLVLRF 136 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchH----------HHHHHHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence 46788889999999999999999999999999999999 99999999999988888764332 22222 2
Q ss_pred HHHHHhhhccccccccc-ccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHH
Q 013609 343 SIALGFLALGRAGFAVN-HMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLC 421 (439)
Q Consensus 343 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (439)
+.+++.+. ..+..... ..=.||++|++..++.....++|..++-++.|.+.+.. .||+.+|++.+++.
T Consensus 137 lqGl~~g~-~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~----------~GW~sifY~~g~~g 205 (466)
T KOG2532|consen 137 LQGLGQGV-LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESS----------LGWPSIFYVFGIVG 205 (466)
T ss_pred HhHHHHhH-HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC----------CCCchHHHHHHHHH
Confidence 22333333 33444444 44466799999999999999999999999999999983 39999999999999
Q ss_pred HHHHHHHHHhccCC
Q 013609 422 ILSSFVFLLFSTGE 435 (439)
Q Consensus 422 ~~~~~~~~~~~~~~ 435 (439)
++-.++++.+.+++
T Consensus 206 ~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 206 LIWFILWFLFYSDS 219 (466)
T ss_pred HHHHHHHHHHhcCC
Confidence 88888877765543
No 246
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.71 E-value=8.8e-07 Score=79.19 Aligned_cols=169 Identities=15% Similarity=0.098 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhccc
Q 013609 253 YVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIF 332 (439)
Q Consensus 253 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (439)
...+.-+-..+++.++.+..+++++......+..+.++..+++.||+++|+ -+..++.+.++++.++.-.
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~----------gi~lgL~l~avg~~lF~pA 98 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA----------GIVLGLLLYAVGAALFWPA 98 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH----------HHHHHHHHHHHHHHHHhhh
Confidence 344444555667779999999999999999999999999999999999999 8899999999999888643
Q ss_pred C---ChhHHHHH-HHHHHHhhhccccccccccccc-CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccccc-----
Q 013609 333 R---SSNGAIFC-SSIALGFLALGRAGFAVNHMDI-APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYS----- 402 (439)
Q Consensus 333 ~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~----- 402 (439)
. +....+.. +.++.|.+. .......+.... +|+..+.-+.+...++.+|++++|.+.+.+..+.....-
T Consensus 99 a~~~~y~~FL~~lFila~Gi~~-LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~ 177 (422)
T COG0738 99 ASSKSYGFFLVALFILASGIGL-LETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQI 177 (422)
T ss_pred hhhhhHHHHHHHHHHHHhhhHH-HHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence 3 22222222 222333222 223333333444 456777888999999999999999999999884211000
Q ss_pred ---CCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 403 ---DLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 403 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
.......++.++...+..+++..+.....+
T Consensus 178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 178 LAIKGADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 011123577788888877777666665555
No 247
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.67 E-value=3e-08 Score=68.26 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=74.2
Q ss_pred HHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHH
Q 013609 21 CYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFI 100 (439)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 100 (439)
.++.+..+.|.+|.+++|.++|.++.|++.+.+.+||.++.+...++.++..+++.+..+.+...+..+.+++.. +++.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~-~~~~ 82 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH-SFWL 82 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-chHH
Confidence 467889999999999999999999999999999999999999999999998889999999999999999999986 6655
Q ss_pred H
Q 013609 101 L 101 (439)
Q Consensus 101 l 101 (439)
.
T Consensus 83 w 83 (85)
T PF06779_consen 83 W 83 (85)
T ss_pred H
Confidence 4
No 248
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.57 E-value=1.5e-06 Score=80.52 Aligned_cols=184 Identities=12% Similarity=0.138 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHH
Q 013609 242 VVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMV 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 321 (439)
...-+...........|+..|+.++.|+++..+|.++.+.=+...+.-++.|.++||..+|+ .++|+.+..+.+.
T Consensus 18 g~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~-----GrfRP~lL~g~ip 92 (467)
T COG2211 18 GLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRW-----GRFRPWLLWGAIP 92 (467)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccc-----ccccHHHHHHhHH
Confidence 34445566677778899999999999999999999999999999999999999999887666 4566677777666
Q ss_pred HHHHHhhhcccCC-------hhHHHHHHHHHHHhhhccccccccccccc--CCChhhHHHHHHHHHhhhhHHHHHHHHHH
Q 013609 322 ASIALMALPIFRS-------SNGAIFCSSIALGFLALGRAGFAVNHMDI--APRYAGIVMGISNTAGTLAGIVGVDMTGK 392 (439)
Q Consensus 322 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 392 (439)
.++...+....++ ....+...+...+......| +.+...+. .|++|.+..+.-....++|..+...+.+.
T Consensus 93 ~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniP-y~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~p 171 (467)
T COG2211 93 FAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIP-YGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPP 171 (467)
T ss_pred HHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCc-hhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665555554442 11223334444444443333 33344443 35899999999999999999999999988
Q ss_pred hhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCC
Q 013609 393 LLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGE 435 (439)
Q Consensus 393 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
+.+..++++ ...+|+....+.+++.++..+..++-.||+
T Consensus 172 lv~~~g~~~----~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 172 LVKLFGGGD----KALGYQGTALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred HHHHhCCCc----chhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 888775432 124777777777777777666666554443
No 249
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.54 E-value=1e-05 Score=74.52 Aligned_cols=380 Identities=12% Similarity=0.017 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHh--hCCCccchhhhhhhhhhhhhhhccccccccc-----ccCchHHHHH-----
Q 013609 12 ILTFISTCVCYIERVGFSIAYTAAADA--AGVNQSSKGTILSTFYYGYACSQVPGGWAAQ-----KIGGRKVLLF----- 79 (439)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~l~~----- 79 (439)
.++.+.+++.+.-.+......|.+.++ -+.|.+|.+...-+ ...+- ..++|.++.| |+||||..++
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 345566777777766665678888777 67788887664322 11111 2345555555 8999998654
Q ss_pred -HHHHHHHHHhh----------hcCCcc--------hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHh
Q 013609 80 -SFVLWSSTCFW----------LKLDPN--------NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTT 140 (439)
Q Consensus 80 -~~~~~~~~~~~----------~~~~~~--------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 140 (439)
|..+..++.-. -.+..+ +...+...-++.=+-.+.-..+.-.+.-....+++++.+..-..
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 33333333332 001000 11122233223333334444555566666667788888877777
Q ss_pred hhhhHHHHHHhhhhhhhhcc-------------cC---CchhHHHHhHHHHHHHHHHhhhccCCCCCCC-CCCCcccccC
Q 013609 141 SGMYLGAAMGMLFLPSLVKY-------------NG---PNSVFNAEAALGGMWSLLWFKYATDPPRSEH-PKASAAGFGE 203 (439)
Q Consensus 141 ~~~~~g~~~g~~~~~~l~~~-------------~~---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 203 (439)
.+.+.|..++..+--.+.+. .| -..-..+.+.+.++..+...++.+|+|..+. ++.+..+..+
T Consensus 161 vG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~ 240 (544)
T PF13000_consen 161 VGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSD 240 (544)
T ss_pred hHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCcccccccccc
Confidence 77777777766554444320 11 1112234445555555666667777664332 1111111000
Q ss_pred ccCcccchhhhhcc--ccc---cccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhh
Q 013609 204 SLLPMRDQKVKVDN--GGS---AMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSK 278 (439)
Q Consensus 204 ~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 278 (439)
...+....+..+.+ .++ .-++.-..+.+++|-|++..+.+.....-.++..-......=+.| .|++.++.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~ 319 (544)
T PF13000_consen 241 GKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV 319 (544)
T ss_pred ccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH
Confidence 00000000000000 001 111222334566788999888888888888877777777777777 799988877654
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhccccch-------------hh----------hhHHHH-HHH-HHHHHHHHhhhcccC
Q 013609 279 MMPYLNMFIFSNIGGVVADHLITKRILSV-------------TR----------TRKFLN-TVG-FMVASIALMALPIFR 333 (439)
Q Consensus 279 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-------------~~----------~~~~~~-~~~-~~~~~~~~~~~~~~~ 333 (439)
.+ .+...++.|+++.|+.+.+...+ +. .+.++. ..+ ++...++.......+
T Consensus 320 li----~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP 395 (544)
T PF13000_consen 320 LI----DFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFP 395 (544)
T ss_pred HH----hhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCC
Confidence 43 55555666666666544332110 00 011111 111 111122222222222
Q ss_pred ---Ch-hHHHHHHHHHHHhh----hccccccccc-ccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccc
Q 013609 334 ---SS-NGAIFCSSIALGFL----ALGRAGFAVN-HMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAK 398 (439)
Q Consensus 334 ---~~-~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 398 (439)
.. ......++..-.+. ........+. ....+|..-|+.+.+.|++.|+|+.--..+.=++.|...
T Consensus 396 ~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 396 SDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 11 11111222211111 1112222222 334567899999999999999999887777777777653
No 250
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.49 E-value=1.4e-09 Score=104.19 Aligned_cols=164 Identities=15% Similarity=0.093 Sum_probs=112.6
Q ss_pred hhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhc----CCcch----H
Q 013609 27 GFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLK----LDPNN----V 98 (439)
Q Consensus 27 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~----~~~~~----~ 98 (439)
......+.+.++.+.++. -.......+...++.+....+.||+|||++++.+..+.++..+..+ ...++ -
T Consensus 271 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 271 FIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 334445667777776666 2222334455566777778999999999999999988888777664 11111 1
Q ss_pred HHHHHHHHHHhhhcc-cchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHH
Q 013609 99 FILVVARLLVGVSQG-FIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMW 177 (439)
Q Consensus 99 ~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~ 177 (439)
...++.-.+..++.+ ...+....+..|.+|.+.|++..++......++..+++.+...+.+..+-...+.+.+.++++.
T Consensus 349 ~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIA 428 (451)
T ss_pred cccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHH
Confidence 111122222212222 3456677888999999999999999999999999999988888777666345667777777777
Q ss_pred HHHHhhhccCCCCCC
Q 013609 178 SLLWFKYATDPPRSE 192 (439)
Q Consensus 178 ~~~~~~~~~~~~~~~ 192 (439)
.+..+++.||+....
T Consensus 429 ~i~~~~~lpET~g~~ 443 (451)
T PF00083_consen 429 IIFVYFFLPETKGKT 443 (451)
T ss_pred HhheeEEEeeCCCCC
Confidence 777788888877654
No 251
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.48 E-value=2e-05 Score=76.27 Aligned_cols=153 Identities=16% Similarity=0.064 Sum_probs=120.9
Q ss_pred hHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhccccccccccc-CchHHHHHHHHHHHHHHhhhcCCc-----------
Q 013609 28 FSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKI-GGRKVLLFSFVLWSSTCFWLKLDP----------- 95 (439)
Q Consensus 28 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~----------- 95 (439)
....+..+.++++.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..++..+..++.
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 45667778889998888888888888888899999999999976 999999999888877753332211
Q ss_pred ---c----------hHHHHHHHHHHHhhhcccchhhHHHHhhhccC---Cc---ccchhhHHHhhhhhHHHHHHhhhhhh
Q 013609 96 ---N----------NVFILVVARLLVGVSQGFIFPSIHTVLAQWVP---PH---ERSRSVSLTTSGMYLGAAMGMLFLPS 156 (439)
Q Consensus 96 ---~----------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~g~~~g~~~~~~ 156 (439)
+ ....+..+.-+..+|.|+.-|...+.-+|-++ ++ ++...+.++....+.|..++..+..+
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 0 12466677777888999999999999999998 22 23477889999999999999988888
Q ss_pred hhcccCCchhHHHHhHHHHHHHHH
Q 013609 157 LVKYNGPNSVFNAEAALGGMWSLL 180 (439)
Q Consensus 157 l~~~~~wr~~f~~~~~~~~~~~~~ 180 (439)
.-+..+|.+.|.+..+...+..++
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILI 240 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHH
Confidence 878899999999887776654443
No 252
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.48 E-value=6e-07 Score=81.32 Aligned_cols=183 Identities=17% Similarity=0.026 Sum_probs=134.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhh--------hhhh-hhhhhhhhcccccccccccCchHHHHH
Q 013609 9 LIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGT--------ILST-FYYGYACSQVPGGWAAQKIGGRKVLLF 79 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~--------~~s~-~~~~~~~~~~~~g~l~dr~Grr~~l~~ 79 (439)
+.+...+...|+.-...+..+.....+.++.++.+.+... ...+ ...++..+-.+...++|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5566777888888888888888888888888775544322 2222 233445577888999999999999999
Q ss_pred HHHHHHHHHhhhcCCcc---hHHHHHHHHHHHhh-hcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhh
Q 013609 80 SFVLWSSTCFWLKLDPN---NVFILVVARLLVGV-SQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLP 155 (439)
Q Consensus 80 ~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 155 (439)
+.+++.+..+..+...+ +-..+++.-.+..+ +.-+.......+-+|.+|.+-|+..-|+..+..-.|.++|...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999999988863 11222222222222 222233455566789999999999999999999999999999988
Q ss_pred hhhc-----ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCC
Q 013609 156 SLVK-----YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSE 192 (439)
Q Consensus 156 ~l~~-----~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (439)
.+.+ ..+-|+.+++.+....+..+..+ +.||+..+.
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~-l~pEtk~~~ 504 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTL-LIPETKGKS 504 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeE-EeecccccC
Confidence 8888 67899999999988877665555 556766554
No 253
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.45 E-value=0.00011 Score=69.68 Aligned_cols=282 Identities=6% Similarity=-0.012 Sum_probs=157.3
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhh-hhhhhcccccccccccCchHHHHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYY-GYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
..+..+..+.+..++..++.+..-..-..+.-+ ..+++.+..+=....+ +..+...+..+++||++|++++-+....+
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt-~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRDLKDTLVVT-AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEe-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 334455666666666666554333322221111 1144555555554444 34556777899999999999988776665
Q ss_pred HHHHhhhcCC---------cc---------------------hHHHHHHHHHHHhhhcccchh-hHHHHhhhccCCcccc
Q 013609 85 SSTCFWLKLD---------PN---------------------NVFILVVARLLVGVSQGFIFP-SIHTVLAQWVPPHERS 133 (439)
Q Consensus 85 ~~~~~~~~~~---------~~---------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~ 133 (439)
.....+.++. ++ +.|.+.+.-+..-+-.....+ .-..+..|.++.+|-.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAK 179 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAK 179 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 5544444432 11 112222222333222222222 3467788999999999
Q ss_pred hhhHHHhhhhhHHHHHHhhhhhhhhc---------ccCCchhHHHHh-HHHH--HHHHHHhhhccCCCCCCCCCCCcccc
Q 013609 134 RSVSLTTSGMYLGAAMGMLFLPSLVK---------YNGPNSVFNAEA-ALGG--MWSLLWFKYATDPPRSEHPKASAAGF 201 (439)
Q Consensus 134 ~~~~~~~~~~~~g~~~g~~~~~~l~~---------~~~wr~~f~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (439)
|..++++.+.++|.+++..+...+.+ ...|...+.... ++.+ +.........++...+.+...+.+
T Consensus 180 RfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~-- 257 (491)
T PF03219_consen 180 RFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSA-- 257 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhh--
Confidence 99999999999999999988888776 123553332221 1111 112222222222111110000000
Q ss_pred cCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc-c---chh
Q 013609 202 GESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQE-M---GSS 277 (439)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~---~~~ 277 (439)
..+++++.+....+.++.++|+|-+..+++...+++...+.+....-..+++.+. ++.+ . |..
T Consensus 258 ------------~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~ 324 (491)
T PF03219_consen 258 ------------KKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKF 324 (491)
T ss_pred ------------hcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHH
Confidence 0000012223344667788899999888888888888888777766666666443 3333 2 334
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcc
Q 013609 278 KMMPYLNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 278 ~~~~~~~~~~~~~~~g~l~d~~~~~~ 303 (439)
....++..++...+++.+.+|+|-+.
T Consensus 325 ~~~tGivtii~~~l~~~iir~~GW~~ 350 (491)
T PF03219_consen 325 SSWTGIVTIIMMFLSSNIIRRFGWRT 350 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 45556666666677778888877665
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.43 E-value=2.5e-06 Score=67.29 Aligned_cols=106 Identities=18% Similarity=0.238 Sum_probs=90.1
Q ss_pred hhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCC
Q 013609 50 LSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPP 129 (439)
Q Consensus 50 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 129 (439)
.++......+..++.+.+.+++|.|+.++++.+.+.+-.... +-+ +.+.++.+-++.|++.+..++..-.++.+..++
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~-~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP-NSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh-hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 455666677788888899999999999999999988655544 445 789999999999999999999999999999999
Q ss_pred cccchhhHHHhhhhhHHHHHHhhhhhhh
Q 013609 130 HERSRSVSLTTSGMYLGAAMGMLFLPSL 157 (439)
Q Consensus 130 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l 157 (439)
++|++..++.......+.++|..+.-.+
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888888887765444
No 255
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.42 E-value=4.9e-06 Score=80.93 Aligned_cols=139 Identities=14% Similarity=0.109 Sum_probs=105.8
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhccc
Q 013609 274 MGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGR 353 (439)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (439)
.+++.+...++..++.++.|+++|++|||+ .+..+.+...++.++.....+.......=++.....+...
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~----------~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~ 160 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKK----------TLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGAS 160 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhh
Confidence 378899999999999999999999999999 8899999999999888888777666665554444444444
Q ss_pred ccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhc
Q 013609 354 AGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 354 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
.....+..|..| +.||...+..+....+|..++ .+.+...++.. .+|+..+.+..+.+++-.+..++.+
T Consensus 161 ~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~---------~~Wr~~~~~~~i~~~~~~~~~~~~p 230 (513)
T KOG0254|consen 161 VLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVY---------AGWRIPLGLALIPAVILALGMLFLP 230 (513)
T ss_pred hcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCC---------ccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 666777888877 699999999999988777777 55555544320 2789888777777766666644443
No 256
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.33 E-value=8.7e-07 Score=60.74 Aligned_cols=71 Identities=15% Similarity=0.053 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHH
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLW 84 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 84 (439)
+-..+++.+.......|.+|...++.|+|+.|+|.+.++..+...++++++|.++||+++++..+....+.
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34556667777788888889999999999999999999999999999999999999999999888776554
No 257
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.32 E-value=5.3e-06 Score=78.69 Aligned_cols=153 Identities=18% Similarity=0.211 Sum_probs=109.3
Q ss_pred HhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHH
Q 013609 265 LGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSI 344 (439)
Q Consensus 265 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (439)
+..++...+.+.+.+...++.+++.+.++.+.||++..+ .+....++..+..++-...++.+..++.-++
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~----------~l~~~~~~w~~~~~~~~~~~s~~~~ialr~l 143 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK----------GLSVSGILWGLFGFLTAAVHSFPGLIALRFL 143 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHH----------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 446677788899999999999999999999999998555 3333333333333232234455555555555
Q ss_pred HHHhhhcccccccccccccC-CChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHH
Q 013609 345 ALGFLALGRAGFAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCIL 423 (439)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (439)
.+.+-+...|....+..... +++|+.-+|+.++..++|+++|..+...+.+..+.. ...+|++.|++-+++.+.
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~-----~~~gW~~~FiI~G~i~~~ 218 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG-----GLAGWRWLFIIEGVITLV 218 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC-----CcCCceeehhHHHHHHHH
Confidence 55555666677666666655 479999999999999999999999998876533211 124899999999988877
Q ss_pred HHHHHHHhc
Q 013609 424 SSFVFLLFS 432 (439)
Q Consensus 424 ~~~~~~~~~ 432 (439)
..++.++..
T Consensus 219 ~gi~~f~~l 227 (495)
T KOG2533|consen 219 LGIVVFFFL 227 (495)
T ss_pred HHheEEEEe
Confidence 776655443
No 258
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.31 E-value=4.8e-06 Score=81.35 Aligned_cols=141 Identities=13% Similarity=0.080 Sum_probs=110.0
Q ss_pred hCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHH
Q 013609 267 LQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIAL 346 (439)
Q Consensus 267 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (439)
...+.....+..++..++..+|.++.|.++||+|||+ +...++++..++-+...+.++.....+.=++..
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~----------~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G 182 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKP----------VLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSG 182 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHH----------HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 4456666677788899999999999999999999999 999999999998888888888877766655544
Q ss_pred Hhhhcccccc-cccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHH
Q 013609 347 GFLALGRAGF-AVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSS 425 (439)
Q Consensus 347 ~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (439)
.+........ ....+.+.|++|+.+..+ ......++.+++...+++.. +|++.+++.....++..
T Consensus 183 ~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-------------~Wr~~~~~~~~~~~~~~ 248 (521)
T KOG0255|consen 183 FFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-------------DWRWLFWIISIPSGLFL 248 (521)
T ss_pred hhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-------------hHHHHHHHHHHHHHHHH
Confidence 4444333333 444455677999999999 88888999999999988886 48888888888877776
Q ss_pred HHHHHh
Q 013609 426 FVFLLF 431 (439)
Q Consensus 426 ~~~~~~ 431 (439)
+..++.
T Consensus 249 ~~~~l~ 254 (521)
T KOG0255|consen 249 LLWFLP 254 (521)
T ss_pred HHHHcc
Confidence 664444
No 259
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.30 E-value=1.2e-05 Score=72.58 Aligned_cols=154 Identities=10% Similarity=0.099 Sum_probs=123.2
Q ss_pred hhHHHHHHHH-HhhCCCccchhhhhhhhhhhhhhhccccccccc-ccCchHHHHHHHHHHHHHHhh---hcCCcchHHHH
Q 013609 27 GFSIAYTAAA-DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQ-KIGGRKVLLFSFVLWSSTCFW---LKLDPNNVFIL 101 (439)
Q Consensus 27 ~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~~l 101 (439)
.-.+++.++. +-||++..|...++.....|..++....|.+.. |.++|+.-.+++....++..+ .+... +.+.+
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~-~~~~~ 304 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLG-SPWLF 304 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcc-cchHH
Confidence 3344555543 458999999999999999999999999998877 678888888888777666654 34444 78999
Q ss_pred HHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc----------cCCchhHHHHh
Q 013609 102 VVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY----------NGPNSVFNAEA 171 (439)
Q Consensus 102 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------~~wr~~f~~~~ 171 (439)
...-++.|++.|.......+..-|..++++.|..+|.+.....++..++..+++.+.|. .++..+|.+.+
T Consensus 305 ~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa 384 (403)
T PF03209_consen 305 RPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEA 384 (403)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988762 23455666666
Q ss_pred HHHHHHHHHH
Q 013609 172 ALGGMWSLLW 181 (439)
Q Consensus 172 ~~~~~~~~~~ 181 (439)
+..++...+.
T Consensus 385 ~ll~~a~~ll 394 (403)
T PF03209_consen 385 VLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHH
Confidence 6555544443
No 260
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.30 E-value=9.1e-06 Score=69.64 Aligned_cols=135 Identities=15% Similarity=0.144 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhc
Q 013609 251 ALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALP 330 (439)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (439)
..+.+..|.|.. ++.+|+|+.|...+.....++..+ .+..|.+.||.+.+. .+.++.+...++...+.
T Consensus 17 t~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~----------~l~iG~~~~~~GY~~~~ 84 (250)
T PF06813_consen 17 TTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWV----------VLLIGAVLGFVGYGLLW 84 (250)
T ss_pred cccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHH----------HHHHHHHHHHHHHHHHH
Confidence 445566666655 456999999999998888888876 488899999999888 88888888888777665
Q ss_pred ccC-----ChhHHHHHHHHHHHhhhc--ccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 331 IFR-----SSNGAIFCSSIALGFLAL--GRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 331 ~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
..- .......++....+..+. ..........+-+|++||++.|+.-....+++++-..+...+.+..
T Consensus 85 l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~ 158 (250)
T PF06813_consen 85 LAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD 158 (250)
T ss_pred HHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCC
Confidence 421 112222222222222221 1122222233456789999999999999999999888887777653
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.23 E-value=8.1e-06 Score=55.97 Aligned_cols=63 Identities=25% Similarity=0.369 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 013609 240 AIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 303 (439)
.+-..+++.+.+...+..++|.|+++ .|+|+.+.|.+.++..+..+++.++.|.++||.++++
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 34556777888888999999999998 8999999999999999999999999999999999998
No 262
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.14 E-value=6.4e-05 Score=74.22 Aligned_cols=169 Identities=14% Similarity=0.015 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHh-hhccccchhhhhHHHHHHHHHHHHHHHhhh
Q 013609 251 ALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHL-ITKRILSVTRTRKFLNTVGFMVASIALMAL 329 (439)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (439)
+++++...+..|+.+.+|++..++..+........-+..+++|++.|++ |+++ .+..+.++..++..++
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~----------tIl~~~ii~~lG~~ll 71 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFK----------TILYLSIVYVVGHALL 71 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHHHHHH
Confidence 3566677788888888999998888887777777778888999999964 5555 6666666666666655
Q ss_pred cccCCh--------hHHHHHHHHHHHhhhcccccccccccc-cCC---ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 330 PIFRSS--------NGAIFCSSIALGFLALGRAGFAVNHMD-IAP---RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 330 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
.....+ ...+..+.+..+..+..-+.......+ ..+ +.+-....+.....++|+.+++.+.+++.+..
T Consensus 72 ai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 72 SFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred HhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 443211 111122222222223333444444333 332 24788899999999999999999999887543
Q ss_pred cccccCCCCcccchhHHHHHHHHHHHHHHHHHHhcc
Q 013609 398 KTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFST 433 (439)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
+.-+ ...+|..+|.+.++..+++.++....++
T Consensus 152 ~~fg----~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 152 GCFG----CQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred cccc----cCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1000 0026888999998888888877765443
No 263
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.03 E-value=0.012 Score=54.84 Aligned_cols=279 Identities=8% Similarity=-0.051 Sum_probs=155.3
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhC---CCccchhhhhhhhhh-hhhhhcccccccccccCchHHHHHHHH
Q 013609 7 RYLIVILTFISTCVCYIERVGFSIAYTAAADAAG---VNQSSKGTILSTFYY-GYACSQVPGGWAAQKIGGRKVLLFSFV 82 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~ 82 (439)
.+..++.+.+..++..+..+..-. +.+.+- .+++.+.++-+..-+ +..+..++.+++.+++.|.+++-+.+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR~----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLRS----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 445556666666666665554433 444443 345667788777777 677888999999999999999988777
Q ss_pred HHHHHHhhhcCCcc--------h-----------------------HHHHHHHHHHHhhhcccchh-hHHHHhhhccCCc
Q 013609 83 LWSSTCFWLKLDPN--------N-----------------------VFILVVARLLVGVSQGFIFP-SIHTVLAQWVPPH 130 (439)
Q Consensus 83 ~~~~~~~~~~~~~~--------~-----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~ 130 (439)
.+....+++++.-. + .|...+.-.+.-+=.+.... .-.....|....+
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ 180 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE 180 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 76666666654310 1 12222222222222122222 3345567888888
Q ss_pred ccchhhHHHhhhhhHHHHHHhhhhhhhhcccC----------CchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCccc
Q 013609 131 ERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG----------PNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAG 200 (439)
Q Consensus 131 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~----------wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (439)
|-.|..+.++.+.+++..++..+..++.++.. -+..+.+.+..++++..+..+.-+...+++....+..+
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~ 260 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKK 260 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhc
Confidence 99999999999999999999888888766211 23334444444444433333332222222110000000
Q ss_pred ccCccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccc---chh
Q 013609 201 FGESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEM---GSS 277 (439)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~ 277 (439)
..+.++.+-...+.++-+.|+|-++.+.+...+++.+.+.+....-.-.++.+..+.+-. +.+
T Consensus 261 --------------kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~ 326 (509)
T COG3202 261 --------------KKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRF 326 (509)
T ss_pred --------------ccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHH
Confidence 000001112234566677888888888888888777777666444444444332222222 223
Q ss_pred hhhhHHH-HHHHHHHHHHHHHHhhhcc
Q 013609 278 KMMPYLN-MFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 278 ~~~~~~~-~~~~~~~~g~l~d~~~~~~ 303 (439)
....++. .++....++.+.+|.|-..
T Consensus 327 ~~~tgvv~~v~~~~~~s~~ir~~GW~~ 353 (509)
T COG3202 327 QIWTGVVSLVVFLFPGSNLIRRVGWFT 353 (509)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhHHH
Confidence 3344444 3344455666776666544
No 264
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.99 E-value=0.00036 Score=62.31 Aligned_cols=150 Identities=11% Similarity=0.001 Sum_probs=92.8
Q ss_pred hhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHH
Q 013609 266 GLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIA 345 (439)
Q Consensus 266 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (439)
.+|++..|++.++......+.+...+.|.+.||+|||+ ..+...++..+.++.... ++....++.=+++
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~----------~cl~~cily~~scl~k~~-~~~~~L~~GRvlg 131 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK----------ACLLFCILYSLSCLTKHS-SNYPVLLLGRVLG 131 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH----------HHHHHHHHHHHHHHHHhc-cccHHHHHHHHHH
Confidence 48999999999999999999999999999999999999 777777777776654433 3333333332222
Q ss_pred HHhhhccccccc-ccc-----cccCCChhhHHHHHHHHH-hhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHH
Q 013609 346 LGFLALGRAGFA-VNH-----MDIAPRYAGIVMGISNTA-GTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPG 418 (439)
Q Consensus 346 ~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (439)
...........- .+. .+.+++..+...+..... +.+-.+.+..+.-.+.+..+ .+...+|....
T Consensus 132 GiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~---------~g~vaPF~~a~ 202 (354)
T PF05631_consen 132 GIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG---------FGPVAPFDAAI 202 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC---------CCCcchHHHHH
Confidence 222222222221 111 233445556666655533 33444455555556666551 23477888888
Q ss_pred HHHHHHHHHHHHhccCC
Q 013609 419 LLCILSSFVFLLFSTGE 435 (439)
Q Consensus 419 ~~~~~~~~~~~~~~~~~ 435 (439)
.+.+++.++.....+|+
T Consensus 203 ~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 203 VLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHHhccccc
Confidence 88888877766555543
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.96 E-value=0.00021 Score=67.53 Aligned_cols=131 Identities=18% Similarity=0.080 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHHHHHHHHhhhccccccccccc
Q 013609 282 YLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFCSSIALGFLALGRAGFAVNHM 361 (439)
Q Consensus 282 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (439)
++..++.+...|.++||+|||. .+......+.+......+.. ++... ..-..+...........+..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~----------~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~va 138 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKV----------VLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVA 138 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhh----------hHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhhee
Confidence 6778888999999999999998 55555444444443333332 22222 11111122222333444555
Q ss_pred ccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 362 DIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 362 ~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
+... |+|....|+.+.....+..++|.+.+.+.+.. ++..++.+..+..+++.+......+++.
T Consensus 139 dis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-----------~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 139 DISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-----------GIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred eccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-----------CchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 5544 79999999999999999999999999999987 8999999999999988887777666543
No 266
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.92 E-value=0.00013 Score=62.74 Aligned_cols=139 Identities=12% Similarity=0.126 Sum_probs=92.6
Q ss_pred hhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhh
Q 013609 46 KGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQ 125 (439)
Q Consensus 46 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 125 (439)
.|.+.-+-.+...+..+.+....||+---.=..+..++.+.+..+.+++. +.++-+.+-.+..++.|.....-.++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~-s~~~sL~GV~~aSissGlGEiTFL~lss- 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSN-SVPMSLLGVVFASISSGLGEITFLALSS- 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEecc-chhHHHhhhhhhhhcCCcceeehhhhhc-
Confidence 34455555556666667777778886443335566777788899999995 8999999999998988876665555443
Q ss_pred ccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc--ccCCchhHHHHhHHHHHHHHHHhhhccCCCC
Q 013609 126 WVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK--YNGPNSVFNAEAALGGMWSLLWFKYATDPPR 190 (439)
Q Consensus 126 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~ 190 (439)
.+|+ ...+.++.+.+.++++|..--..+.+ ..+-|...++...+..+.....++.+++++.
T Consensus 142 ~Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes 204 (409)
T KOG3880|consen 142 RYPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPES 204 (409)
T ss_pred cCCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcc
Confidence 3333 33455666666667777766555655 3467888888777776666666666655443
No 267
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.90 E-value=0.00023 Score=60.27 Aligned_cols=240 Identities=11% Similarity=0.069 Sum_probs=113.4
Q ss_pred cccchhhHHHhhhhhHHHHHHhhhhhhh---hc--ccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCc
Q 013609 130 HERSRSVSLTTSGMYLGAAMGMLFLPSL---VK--YNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGES 204 (439)
Q Consensus 130 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~--~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (439)
|+|+....+...+.++|.++....--.- .+ .-+|++.+.+.+++..+-+++...+-.|-...... +.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~--~k~~---- 75 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK--EKQE---- 75 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc--cccc----
Confidence 6777777777888888887765432111 11 23599999998888777666655553321111111 0000
Q ss_pred cCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc---------cc-
Q 013609 205 LLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQ---------EM- 274 (439)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~~- 274 (439)
+++...+.+....+.+|+|..|...+.+....... .....+.+.......++. +.
T Consensus 76 -------------k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~--V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~ 140 (267)
T PF07672_consen 76 -------------KENSTLSKKPSYKSILKEKETWKWILIYGIWLVVV--VFPFTPSWFNILIWISPANIKSVVSGGGFN 140 (267)
T ss_pred -------------cccccccccchHHHHHccchHHHHHHHHHHHheeE--EEeccchhHhHhhhcCcccccccccccccc
Confidence 00112233466789999999988776655433221 111122222221222221 11
Q ss_pred ---chhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc-cCChh----HHHHHHHHHH
Q 013609 275 ---GSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI-FRSSN----GAIFCSSIAL 346 (439)
Q Consensus 275 ---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~ 346 (439)
.....+...+..+|....|.+.+..-+|| ..-..+...+.++..+..+.... ..+.. ...+..++..
T Consensus 141 ~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk-----~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G 215 (267)
T PF07672_consen 141 WIIPIFQILFVAGYFLGPFTIGLWNKTNYKRK-----PFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAG 215 (267)
T ss_pred hhhHHHHHHHHHHHhhhceeeccchhhhhhhh-----hHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence 11222222333344444455554332333 11111223334444444433211 22221 1111122222
Q ss_pred Hhhhccccccccccc---ccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 347 GFLALGRAGFAVNHM---DIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 347 ~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
.+.-...+....... +..|++.|...|+.-.++++.-.+.-.+...+.|
T Consensus 216 ~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i~~ 267 (267)
T PF07672_consen 216 FFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVIAD 267 (267)
T ss_pred HHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 222122222222222 3567888999999999988888777776665543
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.78 E-value=0.00025 Score=66.32 Aligned_cols=185 Identities=15% Similarity=0.137 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhh-ccccchhhhhHHHH
Q 013609 238 VWAIVVNNFTFHYALYVLMNWLPTYFEL-GLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLIT-KRILSVTRTRKFLN 315 (439)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~ 315 (439)
.+...+..++....+..+..-.-.|+++ ..+-+.+..|+..+...++..++++..|+...|.+. |+ .+
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~----------Pl 105 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKK----------PL 105 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCccc----------CH
Confidence 3444444455544444444334445554 245566677999999999999999999999998885 33 57
Q ss_pred HHHHHHHHHHHhhhcc---cCChhHHHHHHHHHHHhhhcc---cccccccccc-cCCChhhHHHHHHHHHhhhhHHHHHH
Q 013609 316 TVGFMVASIALMALPI---FRSSNGAIFCSSIALGFLALG---RAGFAVNHMD-IAPRYAGIVMGISNTAGTLAGIVGVD 388 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~ 388 (439)
+.+.+++.++.++... .++. ...+++++-.+.+.. ....-.+..+ ..+++|.++.+..+....+|.++||.
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~~--~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPNG--VKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc--hHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 7788888887776632 2232 222222222222222 2233344444 34578899998888888888888887
Q ss_pred HHHHhhcccccccc--CCCCcccchhHHHHHHHHHHHHHHHHHHhccC
Q 013609 389 MTGKLLEAAKTTYS--DLSSPESWRAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 389 ~~g~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
+...+.....++.. +...-+.|+.+-++++++.++..+......||
T Consensus 184 ~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 184 IQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred HHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 76655544322211 11233568888899999998888877776555
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.72 E-value=0.0019 Score=60.91 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhh
Q 013609 97 NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLF 153 (439)
Q Consensus 97 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 153 (439)
.++..++.-++.|++.+.......++.+. +|++ .+..+..+.+++++++..+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~~-fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAGV-FPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhccc-CCHH----HHHHHHhcchhHHHHHHHH
Confidence 57777788888999999888888888774 5543 4556666666666665544
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.71 E-value=0.00034 Score=66.22 Aligned_cols=158 Identities=16% Similarity=0.256 Sum_probs=98.0
Q ss_pred HHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCC----
Q 013609 259 LPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRS---- 334 (439)
Q Consensus 259 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 334 (439)
...++++.+|+++.+...+.....+-. ...++.|.++|-+.-.. .+||+.+.++.++..+....+...+.
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G-----~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s 85 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFG-----YRRKPYMIIGWLLGAVSALVLALLPASESS 85 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccC-----CcchHHHHHHHHHHHHHHHHHHhcccccch
Confidence 445677779999998876655554433 34678889999875322 22456777777777555554444332
Q ss_pred hhHHHHHHH-HHHHhhhccccccccccccc---CCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccc
Q 013609 335 SNGAIFCSS-IALGFLALGRAGFAVNHMDI---APRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESW 410 (439)
Q Consensus 335 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~ 410 (439)
.......++ ...+.... -........|. .|+.+|...+.....+.+|+.++..+.|.+.+.. ++
T Consensus 86 ~~~~~~~l~la~~g~a~~-DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-----------~~ 153 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFA-DVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-----------GP 153 (433)
T ss_pred hhhHHHHHHHHHHHHHHH-HHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-----------CC
Confidence 222222222 22222221 12222222222 3444899999999999999999999999999987 67
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccC
Q 013609 411 RAVFFIPGLLCILSSFVFLLFSTG 434 (439)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~ 434 (439)
+..|.+.+.+..+..+..+.+.++
T Consensus 154 ~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 154 QGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred eEEehHHHHHHHHHHHHHHHhhhh
Confidence 778888777766665555555443
No 271
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.64 E-value=0.00023 Score=66.25 Aligned_cols=107 Identities=18% Similarity=0.196 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHhhhcCC--cch------HHHHHHHHHHHhhhcccchhhHHHHhhhccCCc---ccchhhHHHhhhh
Q 013609 75 KVLLFSFVLWSSTCFWLKLD--PNN------VFILVVARLLVGVSQGFIFPSIHTVLAQWVPPH---ERSRSVSLTTSGM 143 (439)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~--~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 143 (439)
|+++++.+++.+|.++..++ +.+ .+.+.++-.+.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56778888888888773332 212 367888899999999999999999999999865 4677888999999
Q ss_pred hHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHH
Q 013609 144 YLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLW 181 (439)
Q Consensus 144 ~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 181 (439)
++|..++..+.+++-++.+|.+.|.+.++..++..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999887776655443
No 272
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.44 E-value=0.006 Score=55.70 Aligned_cols=124 Identities=9% Similarity=-0.008 Sum_probs=62.7
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCch---HHHHHHHH
Q 013609 6 KRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGR---KVLLFSFV 82 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr---~~l~~~~~ 82 (439)
++.......++..+-....++.+..+.+...+++-.++. .......+.+...+...+.-.+--+...| ++......
T Consensus 15 ~~~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~ 93 (406)
T KOG1479|consen 15 GYNLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSL 93 (406)
T ss_pred ccccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445555555566777788888888887754444 33333344444444444333333333222 22111111
Q ss_pred HHHHHHhh--hcC-----Cc-chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcc
Q 013609 83 LWSSTCFW--LKL-----DP-NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHE 131 (439)
Q Consensus 83 ~~~~~~~~--~~~-----~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 131 (439)
...+.... .+. .+ ..+...++.-++.+.+.+......+...++ +|+|.
T Consensus 94 ~~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 94 IAILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred HHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 11111111 111 11 056677777788888888777777777666 45443
No 273
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.28 E-value=0.0012 Score=45.64 Aligned_cols=78 Identities=18% Similarity=0.184 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhh
Q 013609 249 HYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMA 328 (439)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (439)
..+-+.+...+|...+| .++|..+.+++.+.+.++..+|.+...++.++..+++ ....+.+...+....
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~----------~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR----------LLRAGLLLTVLSTAA 73 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH----------HHHHHHHHHHHHHHH
Confidence 34556677788888777 7999999999999999999999999999888766666 788888888888888
Q ss_pred hcccCChhH
Q 013609 329 LPIFRSSNG 337 (439)
Q Consensus 329 ~~~~~~~~~ 337 (439)
+...++...
T Consensus 74 ma~~~~~~~ 82 (85)
T PF06779_consen 74 MALTHSFWL 82 (85)
T ss_pred HHHHhchHH
Confidence 877765543
No 274
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.19 E-value=0.0013 Score=60.21 Aligned_cols=175 Identities=13% Similarity=-0.003 Sum_probs=107.8
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCc-hHHHHHHHHHHHHHHhh---h
Q 013609 16 ISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGG-RKVLLFSFVLWSSTCFW---L 91 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~---~ 91 (439)
+++.......+.....+......-|.+....|++...-.++.++++...|.+.||... |.++++......++... +
T Consensus 273 ~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~ 352 (480)
T KOG2563|consen 273 ICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTC 352 (480)
T ss_pred HHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333444445554445556667789999999999999999999999999854 45555555554444211 1
Q ss_pred cCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccC---Cch-hH
Q 013609 92 KLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG---PNS-VF 167 (439)
Q Consensus 92 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~---wr~-~f 167 (439)
..-+.+.+.+...-.+.|++.....|...-+-.|..-|..-+...|..+....+=..+-..+-+...+..+ |.. .-
T Consensus 353 t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (480)
T KOG2563|consen 353 TLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPAN 432 (480)
T ss_pred hccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccch
Confidence 11112445556666778888888999999998887655556677777777555555555555566666554 333 33
Q ss_pred HHHhHHHHHHHHHHhhhccCCCC
Q 013609 168 NAEAALGGMWSLLWFKYATDPPR 190 (439)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~ 190 (439)
+.......+..++..++.|+-.+
T Consensus 433 i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 433 IFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred hHhHHHHHHHHHHHhhhhhhHHh
Confidence 33333444444455555444333
No 275
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.02 E-value=0.018 Score=53.15 Aligned_cols=164 Identities=12% Similarity=-0.008 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHh-hCCcccccchhhhhh-HHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 013609 254 VLMNWLPTYFELG-LQLSLQEMGSSKMMP-YLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI 331 (439)
Q Consensus 254 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (439)
....++..|+.+. .|++.+|...-..+. .=..+...+....+.|.++.|. +++.+.+...+...++.+
T Consensus 21 PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykp----------viil~~~~~i~t~~lll~ 90 (412)
T PF01770_consen 21 PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKP----------VIILQALSYIITWLLLLF 90 (412)
T ss_pred CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhH----------HHHHHHHHHHHHHHHHHH
Confidence 3456777888776 889888875433333 3355566677788999998888 777777766666666666
Q ss_pred cCChhHHHHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccch
Q 013609 332 FRSSNGAIFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWR 411 (439)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 411 (439)
.++....-..-++.......-..-....-..++|++.-++.+.......+|..++..++-.+..... .+|.
T Consensus 91 ~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~---------~sy~ 161 (412)
T PF01770_consen 91 GTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG---------VSYF 161 (412)
T ss_pred HCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCHH
Confidence 6555544444333322222222222333445677888888998889888888888888887776331 3677
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCc
Q 013609 412 AVFFIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
....+......++.+..+++++.+|
T Consensus 162 ~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 162 QLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 7777777777777777777766543
No 276
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.98 E-value=0.036 Score=43.95 Aligned_cols=108 Identities=15% Similarity=0.006 Sum_probs=70.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcccCChhHHHHH-HHHHHHhhhccccc
Q 013609 277 SKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPIFRSSNGAIFC-SSIALGFLALGRAG 355 (439)
Q Consensus 277 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 355 (439)
-.++......+..++.+.+.+++|.|+ .+.++.+...+-....... +.+..+.. .+.+.+. +.....
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~----------sm~lg~~~y~~y~~~~~~~-~~~~l~~~s~l~G~~~-a~lW~a 109 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKW----------SMILGSLGYAIYIASFFYP-NSYTLYPASALLGFGA-ALLWTA 109 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHH----------HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHhhhh-HHhhHh
Confidence 345666777888888999999999998 7777777776555544433 33333333 3333333 333344
Q ss_pred ccccccccC-CChhhHHHHHHHHHhhhhHHHHHHHHHHhhcc
Q 013609 356 FAVNHMDIA-PRYAGIVMGISNTAGTLAGIVGVDMTGKLLEA 396 (439)
Q Consensus 356 ~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 396 (439)
...+..+.+ ++.+++-.++...+.+.+..+|..+.-.+...
T Consensus 110 qg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~~ 151 (156)
T PF05978_consen 110 QGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQG 151 (156)
T ss_pred hhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444444444 47899999999999999888888776555443
No 277
>PRK03612 spermidine synthase; Provisional
Probab=96.78 E-value=0.024 Score=54.93 Aligned_cols=160 Identities=16% Similarity=0.224 Sum_probs=93.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHH-HHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHH--HH-HHH-h
Q 013609 15 FISTCVCYIERVGFSIAYTAA-ADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVL--WS-STC-F 89 (439)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~--~~-~~~-~ 89 (439)
.+..++.+.....+-.+...+ ..-+|-+..+.+.+.+++.+|.++|+.+.+++.++--|+.. .+-..+ .+ ++. +
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~l 98 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHH
Confidence 334444455544555544443 34568788889999999999999999999888744333322 111111 11 111 1
Q ss_pred ---hhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc-ccCCch
Q 013609 90 ---WLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK-YNGPNS 165 (439)
Q Consensus 90 ---~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~wr~ 165 (439)
..++.......+...-++.++..|+..|....+..+.. .++-++..|-......+|.++|.++.+++.- .+|-..
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~ 177 (521)
T PRK03612 99 LYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIR 177 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHH
Confidence 11111101122334445667888888888777776543 2345677888888999999999988877554 556444
Q ss_pred hHHHHhHHHHH
Q 013609 166 VFNAEAALGGM 176 (439)
Q Consensus 166 ~f~~~~~~~~~ 176 (439)
..++.+.+.++
T Consensus 178 t~~~~a~l~~~ 188 (521)
T PRK03612 178 TAALTGSLNLL 188 (521)
T ss_pred HHHHHHHHHHH
Confidence 44444444333
No 278
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.66 E-value=0.044 Score=54.21 Aligned_cols=191 Identities=13% Similarity=0.082 Sum_probs=125.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN 315 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 315 (439)
+.+..+.....+......++....-.-++++++++..+.|++...+-++..+......+...|..|.+ ++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr----------~I 165 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPR----------WI 165 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccc----------ee
Confidence 44444333333333333355555555677789999999999999999999999998888888887777 67
Q ss_pred HHHHHHHHHHHhhhcccC-------------------C-----------------------------hhHHHHHHHHHHH
Q 013609 316 TVGFMVASIALMALPIFR-------------------S-----------------------------SNGAIFCSSIALG 347 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~-------------------~-----------------------------~~~~~~~~~~~~~ 347 (439)
..+.++.+++.++....+ . ......+++++..
T Consensus 166 g~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~ 245 (735)
T KOG3626|consen 166 GIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQL 245 (735)
T ss_pred eechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHH
Confidence 777777777666654321 0 0012333333333
Q ss_pred hhhccc----ccccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccc-cc-------CCCCcccchhHH
Q 013609 348 FLALGR----AGFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTT-YS-------DLSSPESWRAVF 414 (439)
Q Consensus 348 ~~~~~~----~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~-~~-------~~~~~~~~~~~~ 414 (439)
+.+.+. +.-..++.|... ++.+...|+..++..+|=++|-.+.+.+...+..- .. |.-..+.|...|
T Consensus 246 l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGF 325 (735)
T KOG3626|consen 246 LLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGF 325 (735)
T ss_pred HhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHH
Confidence 333332 222455666554 67889999999999998888888888877655333 11 111335577788
Q ss_pred HHHHHHHHHHHHHHHHhccCCc
Q 013609 415 FIPGLLCILSSFVFLLFSTGER 436 (439)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~ 436 (439)
++++.+.+++.+.+++++|+.+
T Consensus 326 Li~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 326 LICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHHHHhCcccCc
Confidence 8899999999999988887643
No 279
>PRK03612 spermidine synthase; Provisional
Probab=96.51 E-value=0.1 Score=50.67 Aligned_cols=149 Identities=13% Similarity=-0.046 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHH
Q 013609 242 VVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMV 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 321 (439)
....++..++...+.......+...+|.+..+.+.+.+.+..+..+|+.+++++.++..++. . ..-+.++.+.
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~------~-~~e~~i~l~~ 92 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF------V-AVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH------H-HHHHHHHHHH
Confidence 33445556666666666666777668888888888888877777778777776653322221 0 0001111111
Q ss_pred HHHHHh---hhcccCChhHH-HHHHHHHHHhhhcccccccccccccCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhc-c
Q 013609 322 ASIALM---ALPIFRSSNGA-IFCSSIALGFLALGRAGFAVNHMDIAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLE-A 396 (439)
Q Consensus 322 ~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~-~ 396 (439)
.....+ ...+....... ....++...+.+...|...-.......++.+...|-......+|+.+|+.+.+.+.- .
T Consensus 93 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~ 172 (521)
T PRK03612 93 GLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPR 172 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHh
Confidence 111111 11111001111 111111112222223333333333333345677888888999999999999888765 4
Q ss_pred c
Q 013609 397 A 397 (439)
Q Consensus 397 ~ 397 (439)
.
T Consensus 173 l 173 (521)
T PRK03612 173 L 173 (521)
T ss_pred c
Confidence 4
No 280
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.37 E-value=0.11 Score=46.28 Aligned_cols=152 Identities=21% Similarity=0.195 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCcc--cccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHh
Q 013609 250 YALYVLMNWLPTYFELGLQLSL--QEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALM 327 (439)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (439)
..........+.+..+ .+.+. ...+.......+...++.+..|.+.||.|+|+ ....+......+..
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~----------~~~~~~~~~~~~~~ 84 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK----------VLIIGLLLFLLGTL 84 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchH----------HHHHHHHHHHHHHH
Confidence 3334444556666655 44444 36778888888888888899999999998876 44444433233333
Q ss_pred hhcccCC--hhHHHHHHHHHHHhhhcccccccccccccCC--ChhhHHHHHHHH-HhhhhHHHHHHHHHHhhcccccccc
Q 013609 328 ALPIFRS--SNGAIFCSSIALGFLALGRAGFAVNHMDIAP--RYAGIVMGISNT-AGTLAGIVGVDMTGKLLEAAKTTYS 402 (439)
Q Consensus 328 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~-~~~~g~~i~~~~~g~l~~~~~~~~~ 402 (439)
......+ ...............+...+.......+..| ++|+...+.... ....+..++|.+.+.+.+. ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 160 (338)
T COG0477 85 LLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA--LL-- 160 (338)
T ss_pred HHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh--
Confidence 3333333 2222222222111222333444555555555 478888888888 5778888888777777665 11
Q ss_pred CCCCcccchhHHHHHHHHH
Q 013609 403 DLSSPESWRAVFFIPGLLC 421 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~ 421 (439)
.+|+..+.......
T Consensus 161 -----~~~~~~~~~~~~~~ 174 (338)
T COG0477 161 -----WGWRAAFLLAALLG 174 (338)
T ss_pred -----cchHHHHHHHHHHH
Confidence 25676555554444
No 281
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.23 E-value=0.00055 Score=57.54 Aligned_cols=207 Identities=15% Similarity=0.150 Sum_probs=117.4
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccc---------cccCchHHHHHHHHHH
Q 013609 14 TFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAA---------QKIGGRKVLLFSFVLW 84 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~---------dr~Grr~~l~~~~~~~ 84 (439)
-..+.+.+-......-..+-...++.+.++.+...++-+..+.-++..++.|... ||+|||+..-
T Consensus 22 yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh------ 95 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWH------ 95 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeee------
Confidence 3455666666666666666667788899998888888888888888888887554 6899987542
Q ss_pred HHHHhhhcCCc----------------c---hHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhH
Q 013609 85 SSTCFWLKLDP----------------N---NVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYL 145 (439)
Q Consensus 85 ~~~~~~~~~~~----------------~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 145 (439)
.+++++.+++- . |..++..+-.+.|++-+...-...+.
T Consensus 96 ~~gt~lVslSf~~ifg~a~iF~~~~~~s~vanlglyaialvVFgv~~A~~ke~tea~----------------------- 152 (412)
T KOG4830|consen 96 LIGTVLVSLSFPMIFGFAKIFLCKSTTSEVANLGLYAIALVVFGVGWASVKESTEAL----------------------- 152 (412)
T ss_pred ecccEEEEEechhhcCceeEEeeccHHHHHHHhHHHHHHhheeeeeeecccccHHHH-----------------------
Confidence 22222222221 0 22223333333333322211111000
Q ss_pred HHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCcccccCccCcccchhhhhcccccccccc
Q 013609 146 GAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFGESLLPMRDQKVKVDNGGSAMKAA 225 (439)
Q Consensus 146 g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (439)
.|+.=|....+++......+.+.+| |+.. .+. ++.+..
T Consensus 153 -----------------~R~~~~~~v~lG~~~~~vF~~~TrE-P~~~---~~~---------------------~~s~~~ 190 (412)
T KOG4830|consen 153 -----------------IRLAGWLVVVLGITVAFVFYAFTRE-PTNS---FSS---------------------DASELV 190 (412)
T ss_pred -----------------HHHhhhheeeeceeEEEEEeecccC-cccc---cCc---------------------chhhhh
Confidence 1333333223332222222223233 2211 111 112334
Q ss_pred CchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHH
Q 013609 226 KIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNI 291 (439)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 291 (439)
+.+|..-+++-.+....+.+.+.-...+.-..|+|.|..+.++++.+..+++-.+..+++...+.+
T Consensus 191 Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 191 RMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 556667788888888889999988888888999999988878877776666555555555544443
No 282
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.13 E-value=0.61 Score=43.96 Aligned_cols=178 Identities=15% Similarity=0.092 Sum_probs=104.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHH
Q 013609 237 PVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNT 316 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 316 (439)
..+.+....++.....-...+-.|.++.+.+.-+-.-.+.......+..++.+...|.+.||..|.+-.+... ..--
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l---~~Qn 79 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSL---VVQN 79 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHH---HHHH
Confidence 4566778888888888889999999999876555544555556667778888888999999988777111100 0111
Q ss_pred HHHHHHHHHHhhhc-ccCC----hhHHHH--HHHHHHHhh-hccccccc--------ccccccCCChhhHHHHHHHHHhh
Q 013609 317 VGFMVASIALMALP-IFRS----SNGAIF--CSSIALGFL-ALGRAGFA--------VNHMDIAPRYAGIVMGISNTAGT 380 (439)
Q Consensus 317 ~~~~~~~~~~~~~~-~~~~----~~~~~~--~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~~~ 380 (439)
.+..++...++... .... ...... ......+.. -....... ....+-.++.....++.+.-+-.
T Consensus 80 ~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL 159 (432)
T PF06963_consen 80 LSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDL 159 (432)
T ss_pred HHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHH
Confidence 12222222222211 1111 122111 111122211 11111111 11112244567777888888888
Q ss_pred hhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHH
Q 013609 381 LAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVF 428 (439)
Q Consensus 381 ~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
+...++|.+.|.+.+.. ++.....+.++..+++..+=
T Consensus 160 ~ckllaPl~vG~l~t~~-----------s~~~~~~~i~~~N~~S~~vE 196 (432)
T PF06963_consen 160 FCKLLAPLFVGLLMTFA-----------SPVIAAIFIAGWNLASVFVE 196 (432)
T ss_pred HHHHHHHHHHHHHhhcc-----------CHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999977 67777777777777766543
No 283
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.12 E-value=0.56 Score=41.65 Aligned_cols=67 Identities=19% Similarity=0.120 Sum_probs=51.6
Q ss_pred hhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhhhcc
Q 013609 59 CSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWV 127 (439)
Q Consensus 59 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 127 (439)
....+.+.+..++|-|+++.++...+...-...-. + .+..++-.-...|++.+..+..--+++++.-
T Consensus 73 ~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~-p-r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLE-P-RYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc-h-hHHhhccHHHhhccccccccccCcceecHHH
Confidence 34444448899999999999999888765554433 4 7899999999999999998877777766554
No 284
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.07 E-value=0.012 Score=54.22 Aligned_cols=150 Identities=10% Similarity=0.117 Sum_probs=101.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHH
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLN 315 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 315 (439)
+.........+...+++..=..++|.|+++ .|.+.+-.+.+....-+.+++.+++.|..+||...|. .+||+.+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~-----GRRRPfI 105 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRY-----GRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceeccccccccccccccc-----ccccchH
Confidence 344555666677777888888999999998 8999998888888888899999999999999876555 4455677
Q ss_pred HHHHHHHHHHHhhhcccCCh-------------hHHHHHHHHHHHhhhcc----cccccccccccC-CChhhH-HHHHHH
Q 013609 316 TVGFMVASIALMALPIFRSS-------------NGAIFCSSIALGFLALG----RAGFAVNHMDIA-PRYAGI-VMGISN 376 (439)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~-~~g~~~ 376 (439)
..+....+++++++++.... ...+...++++...-.. ....-....+.. ++++.+ +++...
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 77777777777777665311 12233333333332221 112223333433 344444 888888
Q ss_pred HHhhhhHHHHHHHHH
Q 013609 377 TAGTLAGIVGVDMTG 391 (439)
Q Consensus 377 ~~~~~g~~i~~~~~g 391 (439)
.+..+|+.+|-.+.+
T Consensus 186 ~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHhcceeeeeccc
Confidence 888888888766554
No 285
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.01 E-value=0.27 Score=46.88 Aligned_cols=41 Identities=12% Similarity=-0.082 Sum_probs=34.9
Q ss_pred cccccccccCC-ChhhHHHHHHHHHhhhhHHHHHHHHHHhhc
Q 013609 355 GFAVNHMDIAP-RYAGIVMGISNTAGTLAGIVGVDMTGKLLE 395 (439)
Q Consensus 355 ~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 395 (439)
..+...+|... ++..+-.++.....++|..+++.+..++.+
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777766 788999999999999999999999888875
No 286
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.57 E-value=0.1 Score=48.22 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=81.5
Q ss_pred CccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHH---HHHhhhcCCcchHHHHHHHHHHHhhhcccchhh
Q 013609 42 NQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWS---STCFWLKLDPNNVFILVVARLLVGVSQGFIFPS 118 (439)
Q Consensus 42 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 118 (439)
..++..+....|.+|-.++.--...+ |+-+-+++.+--.+.. +.....-+.+ +.|..++.-+..|+..|..+.-
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fip-si~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIP-SIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHhhhHHHHH
Confidence 34566777788887777664433222 4433333322222222 2223334455 8899989999999999999999
Q ss_pred HHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhh
Q 013609 119 IHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLV 158 (439)
Q Consensus 119 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 158 (439)
+...+.|-.|+++|-.++|..+.+-++|..++..++-.+-
T Consensus 356 tF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 356 TFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998876553
No 287
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.47 E-value=0.0028 Score=57.16 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=0.0
Q ss_pred HHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHh
Q 013609 106 LLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGM 151 (439)
Q Consensus 106 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 151 (439)
++.|++.+........+.+. +|++. +.....+.++++++..
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s 45 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVS 45 (309)
T ss_dssp ----------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHH
Confidence 45677777777777777775 55543 3344445555555443
No 288
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.41 E-value=0.0042 Score=60.33 Aligned_cols=175 Identities=15% Similarity=0.141 Sum_probs=0.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhh
Q 013609 250 YALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMAL 329 (439)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (439)
....++....-.-++++++++..++|.+.+..-++.++..++..++.+|..|.+ .+..+.++.+++.+++
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrpr----------wig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPR----------WIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc----------eeeecHHHHHHHHHHH
Confidence 444555544444567779999999999999999999999999889888866666 7778888888877766
Q ss_pred cccC-----------C-----------------------------------hhHHHHHHHHHHHhhhcccc----ccccc
Q 013609 330 PIFR-----------S-----------------------------------SNGAIFCSSIALGFLALGRA----GFAVN 359 (439)
Q Consensus 330 ~~~~-----------~-----------------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~ 359 (439)
...+ . .......++++....+.... .-..+
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 5421 0 00012223333333333222 22345
Q ss_pred ccc-cCCChhhHHHHHHHHHhhhhHHHHHHHHHHhhcccccccc-----------CCCCcccchhHHHHHHHHHHHHHHH
Q 013609 360 HMD-IAPRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYS-----------DLSSPESWRAVFFIPGLLCILSSFV 427 (439)
Q Consensus 360 ~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
..| +++++.+...|+......+|-++|-.+.+...+.+..... |..-.+.|...|++.+.+.++..+.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 555 4457788888888888888888887777777654322110 1112245666777788888887777
Q ss_pred HHHhccC
Q 013609 428 FLLFSTG 434 (439)
Q Consensus 428 ~~~~~~~ 434 (439)
.+.++|+
T Consensus 246 l~~FPk~ 252 (539)
T PF03137_consen 246 LFFFPKK 252 (539)
T ss_dssp -------
T ss_pred HHcCCcc
Confidence 7777654
No 289
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.38 E-value=0.15 Score=48.11 Aligned_cols=101 Identities=13% Similarity=0.250 Sum_probs=77.3
Q ss_pred hhhhhhcccccccc---cccCchHHHHHHHHHHHHHHhhhcCCcc-----------------hHHHHHHHHHHHhhhccc
Q 013609 55 YGYACSQVPGGWAA---QKIGGRKVLLFSFVLWSSTCFWLKLDPN-----------------NVFILVVARLLVGVSQGF 114 (439)
Q Consensus 55 ~~~~~~~~~~g~l~---dr~Grr~~l~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~r~l~G~~~~~ 114 (439)
++..++..+.+.+. +|+||++.+.++..+..++.++.-.... ++...++.-++.|++.+.
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 34444455555555 4689999999999888888776644311 466778888999999999
Q ss_pred chhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhh
Q 013609 115 IFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPS 156 (439)
Q Consensus 115 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 156 (439)
.....+.++.+.+ +++|..+.++...-..++..++-...+.
T Consensus 370 ~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 370 FNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999 6889999999888888887776655443
No 290
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.76 E-value=0.44 Score=44.38 Aligned_cols=82 Identities=13% Similarity=0.072 Sum_probs=58.6
Q ss_pred HHHHHHHhhhcccccccccccccC---CChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHH
Q 013609 341 CSSIALGFLALGRAGFAVNHMDIA---PRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIP 417 (439)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 417 (439)
+.++..|.++.=+.........+. ++++.+.........++|..+++.+.+++.++. +|...|.+.
T Consensus 40 L~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-----------~~~~~f~i~ 108 (372)
T PF00854_consen 40 LALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-----------GWFLGFGIP 108 (372)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS------------HHHHHHHH
T ss_pred HHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-----------chhhhhhHH
Confidence 344444444433333333333333 346888889999999999999999999999888 899999999
Q ss_pred HHHHHHHHHHHHHhcc
Q 013609 418 GLLCILSSFVFLLFST 433 (439)
Q Consensus 418 ~~~~~~~~~~~~~~~~ 433 (439)
++..+++.+.++.-++
T Consensus 109 ~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 109 AIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHhCCc
Confidence 9999988887766543
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.68 E-value=6.1 Score=36.68 Aligned_cols=64 Identities=9% Similarity=-0.104 Sum_probs=36.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 013609 235 NLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLI 300 (439)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 300 (439)
+-.++..++........++.+.+-.+.|.++..+.++ +........+.+.+...+.-.+-.|..
T Consensus 17 ~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~ 80 (406)
T KOG1479|consen 17 NLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLN 80 (406)
T ss_pred ccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666677777777888888887777766444444 334444444444444444444444433
No 292
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=91.57 E-value=6.1 Score=38.99 Aligned_cols=171 Identities=19% Similarity=0.243 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHH
Q 013609 240 AIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGF 319 (439)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 319 (439)
.....-.+-..+++++...+-.|+.+.++.+...+...............+++++++|.+--|. +.+.++.
T Consensus 41 ~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry---------~tI~~~s 111 (571)
T KOG1237|consen 41 FILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY---------FTINIGS 111 (571)
T ss_pred HHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH---------HHHHHHH
Confidence 3444455666677777788888888888888877776666666777777888999999765544 2555555
Q ss_pred HHHHHHHhhhcccC--------------------Chh---HHHHHHHH---HHHhhhccccccccc-ccccC---C-C--
Q 013609 320 MVASIALMALPIFR--------------------SSN---GAIFCSSI---ALGFLALGRAGFAVN-HMDIA---P-R-- 366 (439)
Q Consensus 320 ~~~~~~~~~~~~~~--------------------~~~---~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~---~-~-- 366 (439)
++..+++.++.... .+. ..++...+ ..|.++. -+..... ....+ | +
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~-r~~~~~fGadQfd~~~~~~~~ 190 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGI-RPCLLAFGADQFDELDPVEVK 190 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCC-CCcchhhcccccCccCcchhh
Confidence 55555543332210 000 01111111 1111222 2222222 22233 3 2
Q ss_pred hhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHHHHHh
Q 013609 367 YAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFVFLLF 431 (439)
Q Consensus 367 ~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
.+..-+.......+.|..++..+.-++-++. +|...|.+..+...++.++++..
T Consensus 191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~-----------~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDNV-----------GWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHhhhhcc-----------cceeeccHHHHHHHHHHHHHHcC
Confidence 3447777788888889999888888887776 89999999888888887776553
No 293
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.34 E-value=2 Score=37.21 Aligned_cols=135 Identities=15% Similarity=0.174 Sum_probs=83.9
Q ss_pred hhhhhhhhhhhhhhhcccccccccccCch--HHHHHHHHHHHHHHhhhc----CCc--chHHHHHHHHHHHhhhcccchh
Q 013609 46 KGTILSTFYYGYACSQVPGGWAAQKIGGR--KVLLFSFVLWSSTCFWLK----LDP--NNVFILVVARLLVGVSQGFIFP 117 (439)
Q Consensus 46 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~----~~~--~~~~~l~~~r~l~G~~~~~~~~ 117 (439)
-|.+.+.+++...+++-+..++..|-..| ..+.+..+...+...+.. .+| .+...=+++-.+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48999999999999999888887765544 344444444333322221 222 1222334444555566788999
Q ss_pred hHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHH
Q 013609 118 SIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLL 180 (439)
Q Consensus 118 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~ 180 (439)
..+.+=+++.|+++|+..+.++..-.++-..++-.---.-....+=|..|-+..+...+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999999998887665544433211000001234567787777666555443
No 294
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=91.10 E-value=2.9 Score=38.25 Aligned_cols=64 Identities=6% Similarity=0.022 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHH-----Hhhhcc
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVAD-----HLITKR 303 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~ 303 (439)
+++..+...+..++....... -.|.+++. .|.|..+.+.......=- ---++...+.| |+||||
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~Grrk 99 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRK 99 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhcccc
Confidence 456677777777777765555 88988885 577776665543322111 11234455566 888888
No 295
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=91.10 E-value=9.5 Score=33.02 Aligned_cols=25 Identities=16% Similarity=-0.092 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 013609 242 VVNNFTFHYALYVLMNWLPTYFELG 266 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (439)
.+.........++.+..=..|.++.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3333444455566666666777774
No 296
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=89.13 E-value=3 Score=37.98 Aligned_cols=166 Identities=10% Similarity=-0.042 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCcc-chhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHH----
Q 013609 11 VILTFISTCVCYIERVGFSIAYTAAADAAGVNQS-SKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWS---- 85 (439)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~---- 85 (439)
.+.+.+++++.....-+..........+++-+.- .++.-.-.-.....+..++.|...|+..|+|++...+.+--
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~ 108 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVI 108 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHH
Confidence 3456777888877777778777777777764322 22222223334456777888999999999999887655432
Q ss_pred --HHHhhhcCCcc-----hHHHHHHHHHHHh----hhcccchhhHHHHhhhcc----CCcccchhh---HHHhhhhhHHH
Q 013609 86 --STCFWLKLDPN-----NVFILVVARLLVG----VSQGFIFPSIHTVLAQWV----PPHERSRSV---SLTTSGMYLGA 147 (439)
Q Consensus 86 --~~~~~~~~~~~-----~~~~l~~~r~l~G----~~~~~~~~~~~~~i~~~~----~~~~r~~~~---~~~~~~~~~g~ 147 (439)
.+.+..-+..+ +++.+..+-++.- ++.=.........-.||. ..+.+.... +.....-..-.
T Consensus 109 vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 109 VAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 22222223221 4444444433332 221111111111223443 233344433 44444444556
Q ss_pred HHHhhhhhhhhcccCCchhHHHHhHHHHH
Q 013609 148 AMGMLFLPSLVKYNGPNSVFNAEAALGGM 176 (439)
Q Consensus 148 ~~g~~~~~~l~~~~~wr~~f~~~~~~~~~ 176 (439)
.+.|.+.|.+.+..+-|..-...++-+.+
T Consensus 189 ~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 189 LLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhcccceeechhhhhhhhHHHHHH
Confidence 78899999999888888755444444443
No 297
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=85.68 E-value=5.7 Score=37.89 Aligned_cols=65 Identities=11% Similarity=0.199 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCcccccchhhhh--hHHHHHHHHH-HHHHHHHHhhhcc
Q 013609 239 WAIVVNNFTFHYALYVLMNWLPTYFEL-GLQLSLQEMGSSKMM--PYLNMFIFSN-IGGVVADHLITKR 303 (439)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~--~~~~~~~~~~-~~g~l~d~~~~~~ 303 (439)
..+.+.+++++........-.|..+++ ..+.|..+.+..... ..=.-++-++ +=....+|+||||
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRK 71 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRK 71 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcc
Confidence 345666777777766555678888876 235555555543222 1222333333 3345567788887
No 298
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=80.64 E-value=16 Score=35.78 Aligned_cols=32 Identities=28% Similarity=0.229 Sum_probs=16.6
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 013609 269 LSLQEMGSSKMMPYLNMFIFSNIGGVVADHLI 300 (439)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 300 (439)
.++..-|.+.....+..++.+.++|+.+.|+-
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~y 321 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARLY 321 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45554555555555555555555555555443
No 299
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=79.84 E-value=58 Score=31.13 Aligned_cols=20 Identities=20% Similarity=0.441 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 013609 413 VFFIPGLLCILSSFVFLLFS 432 (439)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~ 432 (439)
-|.+..++.+++++.+..++
T Consensus 177 YF~~a~~v~l~~i~~~~~l~ 196 (437)
T TIGR00939 177 YFGTPCVVQLICIVCYLLLP 196 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34445555566666555443
No 300
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=78.54 E-value=9.1 Score=34.08 Aligned_cols=117 Identities=15% Similarity=0.150 Sum_probs=80.9
Q ss_pred hhCCC-ccchhhhhhhhhhhhhhhcccccccccccCchHHHH---HHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcc
Q 013609 38 AAGVN-QSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLL---FSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQG 113 (439)
Q Consensus 38 ~~~~s-~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 113 (439)
.+..+ +.|.-|....|.+|-.+..--.-..--+ .-+.+. .-..++.+......+.+ +++...+.-+.-|+-.|
T Consensus 281 g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p--~l~~LailQ~vNl~ff~~~a~~~ftp-si~ivf~lI~~EGLlGG 357 (409)
T KOG3880|consen 281 GFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMP--YLWLLAILQFVNLLFFLLQAWYWFTP-SIWIVFALILFEGLLGG 357 (409)
T ss_pred CCccchhhcchhhheeeeeeEEEEeccceEEech--HHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHhhcCc
Confidence 34443 3457888888887655443221111111 112222 22344555566777887 89999999999999888
Q ss_pred cchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhh
Q 013609 114 FIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSL 157 (439)
Q Consensus 114 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 157 (439)
..+.-..--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 358 asYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 358 ASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred hHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 88888888888888899999999999999999999888776544
No 301
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=77.73 E-value=39 Score=31.21 Aligned_cols=68 Identities=12% Similarity=0.016 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 303 (439)
+....+.+.+++....--...+....|+.+-.|-|....+....+-+....+...+.|...|+..|+|
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~K 94 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVK 94 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHH
Confidence 33344556666666666666777777777744434434444444445556666777788889998888
No 302
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=77.71 E-value=57 Score=29.85 Aligned_cols=99 Identities=11% Similarity=0.126 Sum_probs=64.2
Q ss_pred hhHHHHHHHHHhh-CCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHH----Hhhh-cCCc---ch
Q 013609 27 GFSIAYTAAADAA-GVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSST----CFWL-KLDP---NN 97 (439)
Q Consensus 27 ~~~~~~~~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~----~~~~-~~~~---~~ 97 (439)
.+-..+..++..+ |-+.-|.+.+.+.|...+.+++...-++.|.--.-+....-.++..++ .++. .|+. ++
T Consensus 25 vyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~ 104 (508)
T COG4262 25 VYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPS 104 (508)
T ss_pred HHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchH
Confidence 3334444455444 456678999999999999999999888887543322222222221111 1111 2221 16
Q ss_pred HHHHHHHHHHHhhhcccchhhHHHHhhh
Q 013609 98 VFILVVARLLVGVSQGFIFPSIHTVLAQ 125 (439)
Q Consensus 98 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 125 (439)
-+.+.+.-++.|.-.|...|..+.++..
T Consensus 105 ~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 105 RLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 6788889999999999999999999887
No 303
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=71.45 E-value=60 Score=27.21 Aligned_cols=42 Identities=17% Similarity=0.066 Sum_probs=23.5
Q ss_pred CcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHh
Q 013609 129 PHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEA 171 (439)
Q Consensus 129 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~ 171 (439)
+|++.+--.......-++..+|..+++.+.+..+.+ ..++.+
T Consensus 157 ~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~ 198 (209)
T PF06912_consen 157 GKDRALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPA 198 (209)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHH
Confidence 343333344445555566777777777777766743 344433
No 304
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=70.44 E-value=29 Score=31.71 Aligned_cols=109 Identities=9% Similarity=0.057 Sum_probs=77.3
Q ss_pred hhhhhhhhhhhhhhcccccccccccCchH--HHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHHHHhh
Q 013609 47 GTILSTFYYGYACSQVPGGWAAQKIGGRK--VLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIHTVLA 124 (439)
Q Consensus 47 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 124 (439)
|..-++..+..+++.+..|.+--++.|.. .+..+.+..+...+.++-+. +.|...++-++.+.-.....+.+..-++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~-~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ-HIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc-ceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 56667777888899999999988877764 34445555555556666665 7888888877777777777788888888
Q ss_pred hccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhc
Q 013609 125 QWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVK 159 (439)
Q Consensus 125 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 159 (439)
+....|.-|..+|+.... +.++-.++.....|
T Consensus 353 ~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred HhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 888888888888887653 33444444444445
No 305
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.02 E-value=35 Score=24.81 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=28.9
Q ss_pred CChhhHHHHHHHHHhhhhHHHHHHHHHHhhccc
Q 013609 365 PRYAGIVMGISNTAGTLAGIVGVDMTGKLLEAA 397 (439)
Q Consensus 365 ~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 397 (439)
++.++.+.++-...-.+++.+.....|++.|++
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356888888888888999999999999999998
No 306
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=61.23 E-value=95 Score=25.79 Aligned_cols=35 Identities=14% Similarity=-0.075 Sum_probs=26.8
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 013609 269 LSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 303 (439)
-|+.+.......++++.++.....+...++.+++.
T Consensus 147 ~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~~ 181 (199)
T PF13386_consen 147 GSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRRL 181 (199)
T ss_pred CChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 36666677788888888888888888887776654
No 307
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=60.94 E-value=95 Score=27.13 Aligned_cols=101 Identities=12% Similarity=0.021 Sum_probs=53.2
Q ss_pred hhhhhhhhhhhhhcccccccccc-cCchHHHH----HHHHHHHHHHhhh-cCCcc---hHHHHHHHHHHHhhhcccchhh
Q 013609 48 TILSTFYYGYACSQVPGGWAAQK-IGGRKVLL----FSFVLWSSTCFWL-KLDPN---NVFILVVARLLVGVSQGFIFPS 118 (439)
Q Consensus 48 ~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~----~~~~~~~~~~~~~-~~~~~---~~~~l~~~r~l~G~~~~~~~~~ 118 (439)
...-++..+..++....|+.... +.||+-+. .+.++..+..+.. ...++ ++..+++.-++.|++.=+.+++
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33446677777888888888764 45555443 2344444444432 22222 4667888888888875434333
Q ss_pred HHHHhhhccCCcccchhhHHHhhhhhHHHHH
Q 013609 119 IHTVLAQWVPPHERSRSVSLTTSGMYLGAAM 149 (439)
Q Consensus 119 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 149 (439)
.. .+..-+++.++.+.--.++..+++|.++
T Consensus 225 iL-~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 225 IL-NLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred Hh-cChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 32 2333333333333333344455555544
No 308
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=60.00 E-value=1.2e+02 Score=26.39 Aligned_cols=20 Identities=10% Similarity=-0.034 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q 013609 284 NMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 284 ~~~~~~~~~g~l~d~~~~~~ 303 (439)
+..++-+-+-.++.|+..|+
T Consensus 252 CT~lAVigGk~lAskIS~rt 271 (294)
T KOG2881|consen 252 CTGLAVIGGKYLASKISVRT 271 (294)
T ss_pred HHHHHHhhhHHHhhhheeEE
Confidence 33333333445677887777
No 309
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=59.84 E-value=1.6e+02 Score=28.06 Aligned_cols=43 Identities=9% Similarity=-0.071 Sum_probs=27.8
Q ss_pred CCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHH
Q 013609 128 PPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGG 175 (439)
Q Consensus 128 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~ 175 (439)
.+++.+...++.+++.+.|...-|...+. +|-++..+..+++-
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~ 60 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAY 60 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHH
Confidence 35567788888888888888877776553 34455544444443
No 310
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=58.24 E-value=1.7e+02 Score=27.87 Aligned_cols=148 Identities=9% Similarity=-0.111 Sum_probs=73.2
Q ss_pred hhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcc-cCCchhHHHHhHHHHHHHHHHhhhccCCCCCCCCCCCccccc
Q 013609 124 AQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKY-NGPNSVFNAEAALGGMWSLLWFKYATDPPRSEHPKASAAGFG 202 (439)
Q Consensus 124 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (439)
.|..|+|+|-........+.+.-..++....|.+... .+++...+....-.++..+.....--.-++...+
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glp-------- 82 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLP-------- 82 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC--------
Confidence 4567777775554665555555555555555544433 5666555544433333333332222122221110
Q ss_pred CccCcccchhhhhccccccccccCchHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhH
Q 013609 203 ESLLPMRDQKVKVDNGGSAMKAAKIPWKRIVVNLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPY 282 (439)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 282 (439)
....-|..+-.+.-+...+.......++++.+.++.-.... .+ +.........+.+
T Consensus 83 ----------------------qmi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~-~~-~~~~~~~~ili~g 138 (442)
T COG1457 83 ----------------------QMILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG-SG-TGLPVWAGILIIG 138 (442)
T ss_pred ----------------------hheeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc-cC-CCCcHHHHHHHHH
Confidence 00111233333444555566666667777777666544311 11 2223344445556
Q ss_pred HHHHHHHHHHHHHHHHhhhcc
Q 013609 283 LNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 283 ~~~~~~~~~~g~l~d~~~~~~ 303 (439)
+...+..+++-+...++.|-.
T Consensus 139 ~l~~l~~ifG~r~l~~l~~~a 159 (442)
T COG1457 139 VLMTLVTIFGYRALHKLERIA 159 (442)
T ss_pred HHHHHHHHHhHHHHHHHHHHH
Confidence 666666777767776665544
No 311
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=56.23 E-value=4.5 Score=36.50 Aligned_cols=106 Identities=17% Similarity=0.224 Sum_probs=3.8
Q ss_pred hhhhhhhhhhhhcccccccccc-cCchHHHHHHH--HHHHHHHhhh----------cCCcchHHHHHHHHHHHhhhcccc
Q 013609 49 ILSTFYYGYACSQVPGGWAAQK-IGGRKVLLFSF--VLWSSTCFWL----------KLDPNNVFILVVARLLVGVSQGFI 115 (439)
Q Consensus 49 ~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~--~~~~~~~~~~----------~~~~~~~~~l~~~r~l~G~~~~~~ 115 (439)
....|.++-.+|..+.++.-=+ -.+|++...+. +++.-..++| .+.+ |-+..++.-++.|+..|-.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~-~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFN-SDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCccc-chHHHHHHHHHHHHccchh
Confidence 4567888888888877653211 03444433211 1111112222 1222 5567777889999999999
Q ss_pred hhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhh
Q 013609 116 FPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLP 155 (439)
Q Consensus 116 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 155 (439)
....+.+..+..++++|..+-.+......+|..+|..++-
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp -HHHH-----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888888888888888876653
No 312
>PRK11017 codB cytosine permease; Provisional
Probab=51.94 E-value=2.1e+02 Score=26.98 Aligned_cols=52 Identities=15% Similarity=-0.045 Sum_probs=27.4
Q ss_pred hccCCcccchhhHHHhhhhhHHHHHHhhhhh-hhhcccCCchhHHHHhHHHHH
Q 013609 125 QWVPPHERSRSVSLTTSGMYLGAAMGMLFLP-SLVKYNGPNSVFNAEAALGGM 176 (439)
Q Consensus 125 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~-~l~~~~~wr~~f~~~~~~~~~ 176 (439)
|-.|++||...........+.+........+ .+....+++.......+-.++
T Consensus 2 ~pvp~~~r~~~~~~~~~~~g~~~~~~~~~~g~~l~~GLs~~~ai~aiilG~~i 54 (404)
T PRK11017 2 SPVPQSARKGVLSLTMVMLGFTFFSASMWAGGTLGTGLSFVDFLLAVLIGNLL 54 (404)
T ss_pred CCCCHHHhcchHhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 4467777765555544444455444444433 333446777666554444443
No 313
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=51.51 E-value=1.9e+02 Score=26.41 Aligned_cols=61 Identities=18% Similarity=0.074 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 013609 236 LPVWAIVVNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 303 (439)
|+++.+.....+.+.++.+....-.. .+.+..+.++ ......-+...++.+.+.+++|.|.
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~-----vn~~lg~~sl--~~~y~~l~~s~m~~~~~Ir~~g~K~ 89 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTS-----VNYDLGTVSL--GALYLSLIDSSMFMPLLIRFLGTKW 89 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH-----HhcCcccchh--hhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 44555666666666666555443322 2222222221 2334445566677778899999888
No 314
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=43.90 E-value=47 Score=24.19 Aligned_cols=51 Identities=12% Similarity=0.095 Sum_probs=37.9
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 013609 271 LQEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALPI 331 (439)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (439)
+...|-..+.++...++.+++.++..|+..+.+ .=.++..++.++..++.+
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~----------~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDR----------WDWIGAAICLVGVAIILF 103 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCCh----------HHHHhHHHHHHhHHheEe
Confidence 356778888889999999999999999987776 445555555555554443
No 315
>PRK10263 DNA translocase FtsK; Provisional
Probab=42.50 E-value=5.2e+02 Score=28.75 Aligned_cols=23 Identities=4% Similarity=-0.221 Sum_probs=13.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Q 013609 280 MPYLNMFIFSNIGGVVADHLITK 302 (439)
Q Consensus 280 ~~~~~~~~~~~~~g~l~d~~~~~ 302 (439)
+.+.++.+|..+...+..-+|.-
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~ 82 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVM 82 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHH
Confidence 44556666666666665555543
No 316
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=40.67 E-value=3.6e+02 Score=26.35 Aligned_cols=51 Identities=12% Similarity=0.300 Sum_probs=36.5
Q ss_pred ChhhHHHHHHHHHhhhhHHHHHHHHHHhhccccccccCCCCcccchhHHHHHHHHHHHHHHH
Q 013609 366 RYAGIVMGISNTAGTLAGIVGVDMTGKLLEAAKTTYSDLSSPESWRAVFFIPGLLCILSSFV 427 (439)
Q Consensus 366 ~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
+++..-+|-.+...++...+...+.+.+.+.. ||..+..+...+.+++.+.
T Consensus 315 ~~ysafmG~~~~~tGivtii~~~l~~~iir~~-----------GW~~~AlitPiv~lit~~~ 365 (491)
T PF03219_consen 315 NDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF-----------GWRTAALITPIVILITGLL 365 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------hHHHHHHHhHHHHHHHHHH
Confidence 56777777777777777766677788888887 8888877766665554443
No 317
>COG3619 Predicted membrane protein [Function unknown]
Probab=40.34 E-value=2.4e+02 Score=24.14 Aligned_cols=120 Identities=14% Similarity=0.175 Sum_probs=52.9
Q ss_pred ccchhhhhhhhhhhhhhhcccccccccccCc-hH-HH-HHHHHHHHHHHhhhcCCcc---hHHHHHHHHHHHh-------
Q 013609 43 QSSKGTILSTFYYGYACSQVPGGWAAQKIGG-RK-VL-LFSFVLWSSTCFWLKLDPN---NVFILVVARLLVG------- 109 (439)
Q Consensus 43 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~-~l-~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G------- 109 (439)
+...........+...++......+..|..| .. .. ....++........++.++ +....+..-+.+|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~ 133 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFR 133 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 4444555666666677775555544444443 12 22 2233333333334444321 4444444444444
Q ss_pred ----hhcccchh-----hHHHHhhhccCCcc-cchhhHHHhhhhhHHHHHHhhhhhhhhcccC
Q 013609 110 ----VSQGFIFP-----SIHTVLAQWVPPHE-RSRSVSLTTSGMYLGAAMGMLFLPSLVKYNG 162 (439)
Q Consensus 110 ----~~~~~~~~-----~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 162 (439)
...+..+. ....-+.++...|+ ...--.......-++.+.|...++.+...++
T Consensus 134 k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 134 KVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222111 11122344444332 2222333444555666666666666655444
No 318
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=40.26 E-value=3.9e+02 Score=26.70 Aligned_cols=32 Identities=16% Similarity=0.041 Sum_probs=17.1
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 013609 270 SLQEMGSSKMMPYLNMFIFSNIGGVVADHLIT 301 (439)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 301 (439)
++...+..+..++++..+--++.+....|..+
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~lp 354 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLLP 354 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33444555566666665555555555555433
No 319
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=39.77 E-value=99 Score=19.65 Aligned_cols=41 Identities=10% Similarity=-0.021 Sum_probs=24.2
Q ss_pred hhhHHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHh
Q 013609 142 GMYLGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 142 ~~~~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 182 (439)
+.-+|.+++...+..-...++++....+..+.+++...+..
T Consensus 10 s~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 34466666666655554566777666666666655555444
No 320
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=39.20 E-value=2e+02 Score=23.12 Aligned_cols=57 Identities=7% Similarity=0.049 Sum_probs=34.0
Q ss_pred ccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhccc------CCchhHHHHhHHHHHHHHHHh
Q 013609 126 WVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYN------GPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 126 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------~wr~~f~~~~~~~~~~~~~~~ 182 (439)
.+|.+++.+..+-+.++.-.+...--.+-+.+.... .+...+++.++.+.+..++.-
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN 76 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVN 76 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhc
Confidence 455556666666665555555544444444444322 577888888888777655543
No 321
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=38.92 E-value=43 Score=24.37 Aligned_cols=54 Identities=7% Similarity=0.146 Sum_probs=45.1
Q ss_pred CccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCc
Q 013609 42 NQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDP 95 (439)
Q Consensus 42 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 95 (439)
.++..|-+.++|.-.+.+.++.+++..|+.-+.+-=.++..+..++..+..+.|
T Consensus 52 ~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 52 QPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred CcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 346778899999999999999999999999888877888888777777766654
No 322
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=38.20 E-value=42 Score=29.23 Aligned_cols=60 Identities=12% Similarity=0.139 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCcccccchhhhhhHHHHHHHHHHHHH---------HHHHhhhcc
Q 013609 243 VNNFTFHYALYVLMNWLPTYFELGLQLSLQEMGSSKMMPYLNMFIFSNIGGV---------VADHLITKR 303 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~---------l~d~~~~~~ 303 (439)
...+..-..-....+|+-.|+++ .|.++.+.+.++....+...+..++.|. -.||+|||+
T Consensus 24 vGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhccee
Confidence 34455555556667778888888 6899988888777777888888777653 468898887
No 323
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=37.71 E-value=34 Score=25.00 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=24.4
Q ss_pred hhcccCCchhHHHHhHHHHHHHHHHhhhccCCC
Q 013609 157 LVKYNGPNSVFNAEAALGGMWSLLWFKYATDPP 189 (439)
Q Consensus 157 l~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 189 (439)
-.+..+|+.+|++...++++.+.+.+.+.||..
T Consensus 53 ~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 53 KRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred cchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 334678999999988888777777776776654
No 324
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.56 E-value=98 Score=22.62 Aligned_cols=21 Identities=10% Similarity=0.083 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcc
Q 013609 283 LNMFIFSNIGGVVADHLITKR 303 (439)
Q Consensus 283 ~~~~~~~~~~g~l~d~~~~~~ 303 (439)
+.+++.....||+.||+-.-.
T Consensus 53 IsGilVGa~iG~llD~~agTs 73 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTS 73 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCC
Confidence 445556667789999875544
No 325
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=37.16 E-value=83 Score=24.82 Aligned_cols=80 Identities=10% Similarity=0.144 Sum_probs=49.5
Q ss_pred ccccccCchHHHHHHH------HHHHHHHhhhcC----CcchHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchh
Q 013609 66 WAAQKIGGRKVLLFSF------VLWSSTCFWLKL----DPNNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRS 135 (439)
Q Consensus 66 ~l~dr~Grr~~l~~~~------~~~~~~~~~~~~----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 135 (439)
..+||.-||-.+..+. ..+.+...+..- .+ ++..+++.-.+.|+| ...+.|..++..+++++.|..
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP-~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVP-PWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccC-chHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCc
Confidence 4678887665554432 222222222211 12 556666666666665 446677788888888889999
Q ss_pred hHHHhhhhhHHHHH
Q 013609 136 VSLTTSGMYLGAAM 149 (439)
Q Consensus 136 ~~~~~~~~~~g~~~ 149 (439)
+|+-..-.+++-+.
T Consensus 132 lG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 132 LGWEEFKRNWGRMW 145 (153)
T ss_pred ccHHHHHHhHHHHH
Confidence 99988888776654
No 326
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=36.80 E-value=51 Score=27.92 Aligned_cols=51 Identities=16% Similarity=0.274 Sum_probs=36.1
Q ss_pred HHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhh
Q 013609 103 VARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFL 154 (439)
Q Consensus 103 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 154 (439)
..-.-.|+|++....++..-+.+.+| +......++-.+.+-+....|-...
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455799999999999999999996 5566677766666666555554443
No 327
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=36.72 E-value=26 Score=25.56 Aligned_cols=55 Identities=9% Similarity=-0.042 Sum_probs=33.1
Q ss_pred ccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhcccchhhHH
Q 013609 66 WAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGFIFPSIH 120 (439)
Q Consensus 66 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 120 (439)
+.+|.+.|+...+...+...++..+.+.+-++.+.=.+--.-.|+|.........
T Consensus 22 K~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~ 76 (106)
T COG2076 22 KYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGV 76 (106)
T ss_pred HHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Confidence 5677777777777777776666666666544555555555556666554433333
No 328
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=36.43 E-value=3e+02 Score=24.56 Aligned_cols=61 Identities=16% Similarity=0.158 Sum_probs=35.8
Q ss_pred HHHHHHHHhhhcccchhhHHHHhhhccCCcccchhhHHHhhhhhHHHHHHhhhhhhhhcccCC
Q 013609 101 LVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAMGMLFLPSLVKYNGP 163 (439)
Q Consensus 101 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 163 (439)
--..|.+.|+-.- ....++++++-.||++++-...--.....++..++-|++| .+.+...|
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g-~~l~~~~~ 82 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIG-LLLNYTPW 82 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHH-HHHHhccC
Confidence 4577888887654 4466889999999865544333333344444445555554 44443333
No 329
>PRK02237 hypothetical protein; Provisional
Probab=35.20 E-value=89 Score=22.88 Aligned_cols=49 Identities=12% Similarity=-0.008 Sum_probs=36.4
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHhhhc
Q 013609 272 QEMGSSKMMPYLNMFIFSNIGGVVADHLITKRILSVTRTRKFLNTVGFMVASIALMALP 330 (439)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (439)
.+.|-....++...++.+++.++..|+....+ .=.++..++.++..++.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~----------~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDR----------WDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCCh----------hHHHhHHHHHHhHHHhe
Confidence 34778888999999999999999999987766 44555555555554443
No 330
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.28 E-value=2e+02 Score=22.75 Aligned_cols=30 Identities=10% Similarity=0.227 Sum_probs=21.3
Q ss_pred ccccccccCCChhhHHHHHHHHHhhhhHHH
Q 013609 356 FAVNHMDIAPRYAGIVMGISNTAGTLAGIV 385 (439)
Q Consensus 356 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i 385 (439)
+......-.|++.|+..|+-..-.+++...
T Consensus 116 YGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 116 YGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 444445667788899999888888776544
No 331
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=33.99 E-value=1e+02 Score=27.38 Aligned_cols=37 Identities=11% Similarity=0.194 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhhhccc
Q 013609 78 LFSFVLWSSTCFWLKLDPNNVFILVVARLLVGVSQGF 114 (439)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 114 (439)
+.+++++++++++..+..++.+.+.+.-++.+++.++
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 3455555555555555543556666666666665443
No 332
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=33.42 E-value=2.7e+02 Score=26.25 Aligned_cols=102 Identities=11% Similarity=0.091 Sum_probs=61.5
Q ss_pred HHHHHH-HhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHh
Q 013609 31 AYTAAA-DAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVG 109 (439)
Q Consensus 31 ~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 109 (439)
..|.+. +..|.+++|...+.+...+...++.++...-.-++|.|..+..+.....++.....-....+...+..-++.|
T Consensus 14 ~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~G 93 (406)
T TIGR03173 14 AVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAG 93 (406)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 344443 4459999888888888888888888887433335777777666544433333322222225666666666666
Q ss_pred hhcccchhhHHHHhhhccCCcccc
Q 013609 110 VSQGFIFPSIHTVLAQWVPPHERS 133 (439)
Q Consensus 110 ~~~~~~~~~~~~~i~~~~~~~~r~ 133 (439)
+-.-... .....+.+.+|+.-.|
T Consensus 94 ii~illg-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 94 LFVILLA-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred HHHHHHH-HHHHHHHHHCCcHHHH
Confidence 6544333 3455677888765433
No 333
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=32.99 E-value=4.3e+02 Score=25.06 Aligned_cols=98 Identities=8% Similarity=-0.056 Sum_probs=54.8
Q ss_pred HHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhh-hcCCcchHHHHHHHHHHHhhhccc
Q 013609 36 ADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFW-LKLDPNNVFILVVARLLVGVSQGF 114 (439)
Q Consensus 36 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~~~ 114 (439)
.... .+++|...+.+...+...++.++-+...++. -|-....+.....++... .... .++......-++.|+....
T Consensus 30 ~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~~~~~~-~~~~~~~g~~i~~gl~~~l 106 (415)
T TIGR00801 30 GLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMIAIGSG-LGIPAIMGALIATGLVYTL 106 (415)
T ss_pred hccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHHHHHhc-cCHHHHHHHHHHHHHHHHH
Confidence 3445 8889999999999999999999988776654 122222222211122221 2222 2455555555555555443
Q ss_pred chhh----HHHHhhhccCCcccchhh
Q 013609 115 IFPS----IHTVLAQWVPPHERSRSV 136 (439)
Q Consensus 115 ~~~~----~~~~i~~~~~~~~r~~~~ 136 (439)
.... ....+.+.+|+.-.+...
T Consensus 107 l~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 107 LSLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHHhhHHHHHhcCCchhHHHhH
Confidence 3222 233557788877666543
No 334
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=32.99 E-value=3.5e+02 Score=24.03 Aligned_cols=32 Identities=9% Similarity=0.088 Sum_probs=19.1
Q ss_pred HHhhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013609 229 WKRIVVNLPVWAIVVNNFTFHYALYVLMNWLP 260 (439)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (439)
.+++.|+|+.+............+.....|.|
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 35578888777666665555444444444444
No 335
>PRK02237 hypothetical protein; Provisional
Probab=29.65 E-value=73 Score=23.30 Aligned_cols=52 Identities=8% Similarity=0.089 Sum_probs=43.0
Q ss_pred cchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCc
Q 013609 44 SSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDP 95 (439)
Q Consensus 44 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 95 (439)
++.|-+.++|.-.+.+.++.+++..|+.-+-+-=.++..+..+|..+..+.|
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4578899999999999999999999999877777777777777776665654
No 336
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.23 E-value=8.5e+02 Score=26.97 Aligned_cols=36 Identities=8% Similarity=0.085 Sum_probs=23.1
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhC
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAG 40 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 40 (439)
+..|..+++-.++..+.+...-.++.....+.+.|-
T Consensus 660 ~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~ 695 (1228)
T KOG0055|consen 660 KPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFY 695 (1228)
T ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 345666666677777777666666666666555554
No 337
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=27.34 E-value=1.5e+02 Score=17.98 Aligned_cols=38 Identities=21% Similarity=0.198 Sum_probs=17.4
Q ss_pred HHHHHHhhhhhhhhcccCCchhHHHHhHHHHHHHHHHh
Q 013609 145 LGAAMGMLFLPSLVKYNGPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 145 ~g~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 182 (439)
+|..+|..+.+.+-...++.+.-++.++++.+..+..+
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 34444444443333233445555555666555444443
No 338
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=26.86 E-value=32 Score=26.28 Aligned_cols=18 Identities=17% Similarity=-0.001 Sum_probs=9.6
Q ss_pred chhHHHHhHHHHHHHHHH
Q 013609 164 NSVFNAEAALGGMWSLLW 181 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~ 181 (439)
||++++..++.++++++.
T Consensus 1 RW~l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFL 18 (130)
T ss_pred CeeeHHHHHHHHHHHHHH
Confidence 566666555555444333
No 339
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=26.84 E-value=4.6e+02 Score=25.21 Aligned_cols=128 Identities=11% Similarity=0.021 Sum_probs=79.8
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccccCchHHHHHHHHHHHH
Q 013609 7 RYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSS 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 86 (439)
.......+.+-+.+..+......|.+ +..++|++.+|...+.++-.+...++.++.-....+.|-|-....+.-...+
T Consensus 14 ~~~~~~~lglQH~lamfg~~V~VPli--vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi 91 (451)
T COG2233 14 PLGKLLLLGLQHLLAMFGATVLVPLL--VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFV 91 (451)
T ss_pred ChHHHHHHHHHHHHHHHhcchHhhHH--hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHH
Confidence 33445555666666555544333322 4568899999999999999999999988876544456666666666555555
Q ss_pred HHhhhcCCc--chHHHHHHHHHHHhhhcccchhhHHHHhhhccCCcccchhh
Q 013609 87 TCFWLKLDP--NNVFILVVARLLVGVSQGFIFPSIHTVLAQWVPPHERSRSV 136 (439)
Q Consensus 87 ~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 136 (439)
+........ +.....+.+-+..|+..-...+.....+.+.+||---|...
T Consensus 92 ~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi 143 (451)
T COG2233 92 APMIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVV 143 (451)
T ss_pred HHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEe
Confidence 554444432 13566666666666655443333332778888887666543
No 340
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=25.90 E-value=1.2e+02 Score=25.90 Aligned_cols=30 Identities=17% Similarity=0.367 Sum_probs=19.0
Q ss_pred cccCCChhhHHHHHHHHHhhhhHHHHHHHH
Q 013609 361 MDIAPRYAGIVMGISNTAGTLAGIVGVDMT 390 (439)
Q Consensus 361 ~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~ 390 (439)
.+..|+...+..++....+-+.+..|.+..
T Consensus 197 ~~~~P~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 197 AAAYPEMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344577777777777666666666665544
No 341
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=25.39 E-value=2.2e+02 Score=21.16 Aligned_cols=22 Identities=14% Similarity=-0.100 Sum_probs=14.0
Q ss_pred chHHhhhcchhHHHHHHHHHHH
Q 013609 227 IPWKRIVVNLPVWAIVVNNFTF 248 (439)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~ 248 (439)
...+.++++++++.-.+.+.+.
T Consensus 33 ~~~~~Ll~n~~y~ipf~lNq~G 54 (113)
T PF10639_consen 33 QEIKFLLLNPKYIIPFLLNQSG 54 (113)
T ss_pred HHHHHHHHhHHHHHHHHHHHHH
Confidence 3445678888887766555443
No 342
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=25.32 E-value=1.1e+02 Score=19.82 Aligned_cols=28 Identities=11% Similarity=0.133 Sum_probs=14.0
Q ss_pred CchhHHHHhHHH---HHHHHHHhhhccCCCC
Q 013609 163 PNSVFNAEAALG---GMWSLLWFKYATDPPR 190 (439)
Q Consensus 163 wr~~f~~~~~~~---~~~~~~~~~~~~~~~~ 190 (439)
+|..|.+...+. ++.-++.++..|++|+
T Consensus 31 vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~~ 61 (61)
T PF04024_consen 31 VRLIFVVLTFFTGGGILLYLILWLLLPKEPE 61 (61)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCCC
Confidence 355665555432 2333344556666553
No 343
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=24.91 E-value=2.8e+02 Score=20.27 Aligned_cols=13 Identities=8% Similarity=0.202 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHH
Q 013609 314 LNTVGFMVASIAL 326 (439)
Q Consensus 314 ~~~~~~~~~~~~~ 326 (439)
+........++.+
T Consensus 91 ~~a~~l~~~Gv~l 103 (113)
T PF13536_consen 91 WLAILLILIGVIL 103 (113)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444433
No 344
>TIGR00800 ncs1 NCS1 nucleoside transporter family. The NCS1 family consists of bacterial and yeast transporters for nucleobases including purines and pyrimidines. Members of this family possess twelve putative transmembrane a-helical spanners (TMSs). At least some of them have been shown to function in uptake by substrate:H+ symport mechanism.
Probab=24.87 E-value=6.2e+02 Score=24.22 Aligned_cols=57 Identities=11% Similarity=-0.129 Sum_probs=29.6
Q ss_pred hccCCcccc-hhhHHHhhhhhHHHHHHhhhhhhh-hc-ccCCchhHHHHhHHHHHHHHHH
Q 013609 125 QWVPPHERS-RSVSLTTSGMYLGAAMGMLFLPSL-VK-YNGPNSVFNAEAALGGMWSLLW 181 (439)
Q Consensus 125 ~~~~~~~r~-~~~~~~~~~~~~g~~~g~~~~~~l-~~-~~~wr~~f~~~~~~~~~~~~~~ 181 (439)
|-.|++||. +...+.....+....+.....|.. .. ..+++...+...+-.++..++.
T Consensus 5 ~pvp~~~R~~~~~~~~~~W~~~~~~v~~~~~Ga~l~~~GLs~~~ailai~lG~~i~~~~~ 64 (442)
T TIGR00800 5 QPVKEEERTWSFLNYFSLWLGAAFNIATWAIGALGLPLGLSWWQSVIAIILGNLLGGIFV 64 (442)
T ss_pred CCCCcccCCccHHHHHHHHHHHhhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 445777776 666665555555444444333333 22 2567766665554444444333
No 345
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=23.34 E-value=6e+02 Score=23.56 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=9.9
Q ss_pred HhhhcchhHHHHHHHHHH
Q 013609 230 KRIVVNLPVWAIVVNNFT 247 (439)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~ 247 (439)
++.+++|.++...+....
T Consensus 239 ~~~~~nP~~~a~~lgli~ 256 (385)
T PF03547_consen 239 LKLFKNPPLIAIILGLII 256 (385)
T ss_pred HHHHhCcHHHHHHHHHHH
Confidence 445666766655554433
No 346
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=23.29 E-value=1.5e+02 Score=20.55 Aligned_cols=20 Identities=10% Similarity=-0.145 Sum_probs=13.2
Q ss_pred chhHHHHhHHHHHHHHHHhh
Q 013609 164 NSVFNAEAALGGMWSLLWFK 183 (439)
Q Consensus 164 r~~f~~~~~~~~~~~~~~~~ 183 (439)
|...++.+++-+++++.+.+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 66677777777776655544
No 347
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=23.13 E-value=5.5e+02 Score=23.04 Aligned_cols=80 Identities=16% Similarity=0.099 Sum_probs=45.6
Q ss_pred CchhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhCCCccchhhhhhhhhhhhhhhcccccccccc---cCchHHHHHHH
Q 013609 5 PKRYLIVILTFISTCVCYIERVGFSIAYTAAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQK---IGGRKVLLFSF 81 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr---~Grr~~l~~~~ 81 (439)
+|+....+.+..++++.-+..+..+-.+..+++..+...+..++..+..... +..+-.++ ||.||.=+++.
T Consensus 21 ~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiLaa 94 (296)
T COG1230 21 ERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIK------LARRPATKRFTFGYKRLEILAA 94 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHHHH
Confidence 3444455555555555555555666666667777776666666655554332 22333333 88888777766
Q ss_pred HHHHHHHhh
Q 013609 82 VLWSSTCFW 90 (439)
Q Consensus 82 ~~~~~~~~~ 90 (439)
+..++..+.
T Consensus 95 ~~nav~Li~ 103 (296)
T COG1230 95 FLNALLLIV 103 (296)
T ss_pred HHHHHHHHH
Confidence 665544443
No 348
>PRK11375 allantoin permease; Provisional
Probab=22.66 E-value=7.2e+02 Score=24.22 Aligned_cols=57 Identities=9% Similarity=-0.172 Sum_probs=32.2
Q ss_pred ccCCccc-chhhHHHhhhhhHHHHHHh--hhhhhhhcccCCchhHHHHhHHHHHHHHHHh
Q 013609 126 WVPPHER-SRSVSLTTSGMYLGAAMGM--LFLPSLVKYNGPNSVFNAEAALGGMWSLLWF 182 (439)
Q Consensus 126 ~~~~~~r-~~~~~~~~~~~~~g~~~g~--~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 182 (439)
-.|+||| .+...+.....+....+.. ..++.+....+|+..+....+-.++..++..
T Consensus 19 pvp~~~Rt~~~~~~~~~W~g~~~~i~~~~~~g~~l~~GLs~~~ai~ai~lG~~i~~~~~~ 78 (484)
T PRK11375 19 PKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMV 78 (484)
T ss_pred cCCccccCCcHHHHHHHHHHHhccHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 3567788 6666666666555554444 2444444456777776665555444444333
No 349
>COG4769 Predicted membrane protein [Function unknown]
Probab=22.43 E-value=45 Score=26.45 Aligned_cols=52 Identities=17% Similarity=0.128 Sum_probs=34.8
Q ss_pred hhhhhhhhhcccccccccccCchHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHhh
Q 013609 52 TFYYGYACSQVPGGWAAQKIGGRKVLLFSFVLWSSTCFWLKLDPNNVFILVVARLLVGV 110 (439)
Q Consensus 52 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 110 (439)
++++...+.+...-++..++|+|..-.++.-.+ .++. ||..++.+.+++.|-
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~-hNl~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFT-HNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHH-HhHHHHHHHHHHHhc
Confidence 445555566666677888899888755554332 2344 488888888888764
No 350
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=21.72 E-value=93 Score=23.50 Aligned_cols=10 Identities=0% Similarity=-0.084 Sum_probs=4.2
Q ss_pred HHHHHhccCC
Q 013609 426 FVFLLFSTGE 435 (439)
Q Consensus 426 ~~~~~~~~~~ 435 (439)
++.++++|++
T Consensus 83 li~y~irR~~ 92 (122)
T PF01102_consen 83 LISYCIRRLR 92 (122)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHh
Confidence 3344444433
No 351
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=21.54 E-value=1.5e+02 Score=19.78 Aligned_cols=35 Identities=14% Similarity=0.107 Sum_probs=17.5
Q ss_pred hhcccCC-----chhHHHHhHHH------HHHHHHHhhhccCCCCC
Q 013609 157 LVKYNGP-----NSVFNAEAALG------GMWSLLWFKYATDPPRS 191 (439)
Q Consensus 157 l~~~~~w-----r~~f~~~~~~~------~~~~~~~~~~~~~~~~~ 191 (439)
+.++++| |..+.+..... ++.-++.++..|+.+..
T Consensus 21 la~yf~id~tlVRll~vl~~~~~~~~~~~ii~Yiia~~imP~~~~~ 66 (70)
T COG1983 21 LAEYFGIDPTLVRLLFVLLTLFGGLTGFGIIAYIIAALIMPSEEDE 66 (70)
T ss_pred HHHHhCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHCCCCccc
Confidence 4566776 34444444333 33344455566665544
No 352
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.09 E-value=1.4e+02 Score=29.09 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=22.3
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 013609 269 LSLQEMGSSKMMPYLNMFIFSNIGGVVADHLI 300 (439)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 300 (439)
++|+.=|.+.+...+..++.+.++|+.+.|+-
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rly 387 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLY 387 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 47777777777766667777777777766654
Done!