Query 013614
Match_columns 439
No_of_seqs 255 out of 1828
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 05:38:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013614.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013614hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0114 FumC Fumarase [Energy 100.0 2E-119 4E-124 888.6 40.8 401 36-438 2-404 (462)
2 KOG1317 Fumarase [Energy produ 100.0 1E-111 2E-116 811.6 32.0 406 33-438 24-429 (487)
3 COG1027 AspA Aspartate ammonia 100.0 3E-109 7E-114 813.7 38.8 403 35-438 2-406 (471)
4 PRK12425 fumarate hydratase; P 100.0 2E-105 4E-110 836.3 44.7 400 37-438 2-403 (464)
5 PRK14515 aspartate ammonia-lya 100.0 2E-102 5E-107 813.5 44.2 401 35-438 9-411 (479)
6 PLN00134 fumarate hydratase; P 100.0 6E-100 1E-104 794.1 44.7 395 44-438 1-397 (458)
7 TIGR00979 fumC_II fumarate hyd 100.0 1.3E-99 3E-104 791.7 44.5 400 37-438 1-402 (458)
8 PRK13353 aspartate ammonia-lya 100.0 5.3E-99 1E-103 790.4 44.5 401 35-438 3-405 (473)
9 PRK12273 aspA aspartate ammoni 100.0 6E-96 1E-100 767.2 44.1 404 34-438 2-407 (472)
10 PRK00485 fumC fumarate hydrata 100.0 4.1E-95 9E-100 760.4 45.2 400 36-438 3-405 (464)
11 cd01357 Aspartase Aspartase. T 100.0 5.6E-94 1.2E-98 748.8 44.3 398 38-438 1-400 (450)
12 TIGR00839 aspA aspartate ammon 100.0 9.3E-93 2E-97 740.7 44.3 400 38-438 1-403 (468)
13 cd01362 Fumarase_classII Class 100.0 6.5E-90 1.4E-94 718.7 44.8 399 38-438 1-401 (455)
14 cd01596 Aspartase_like asparta 100.0 1.9E-87 4.1E-92 698.8 44.7 398 38-438 1-400 (450)
15 PRK00855 argininosuccinate lya 100.0 5.2E-73 1.1E-77 593.8 39.0 354 50-437 2-364 (459)
16 PRK09053 3-carboxy-cis,cis-muc 100.0 3.7E-73 7.9E-78 593.9 36.0 352 52-438 9-364 (452)
17 COG0165 ArgH Argininosuccinate 100.0 1.4E-72 3E-77 574.8 35.3 354 52-437 3-363 (459)
18 TIGR00838 argH argininosuccina 100.0 9.6E-71 2.1E-75 576.3 38.4 350 58-438 9-361 (455)
19 PLN02646 argininosuccinate lya 100.0 5.6E-71 1.2E-75 578.4 36.4 351 53-437 17-376 (474)
20 cd01597 pCLME prokaryotic 3-ca 100.0 9.2E-70 2E-74 566.7 36.2 348 53-437 4-354 (437)
21 TIGR02426 protocat_pcaB 3-carb 100.0 1.4E-69 3.1E-74 547.3 34.8 334 53-424 4-338 (338)
22 TIGR00928 purB adenylosuccinat 100.0 1.1E-68 2.4E-73 558.1 34.4 347 52-438 2-354 (435)
23 cd01595 Adenylsuccinate_lyase_ 100.0 1.1E-68 2.4E-73 549.6 31.2 337 75-438 6-346 (381)
24 PRK08540 adenylosuccinate lyas 100.0 2.2E-68 4.8E-73 557.7 32.7 351 49-437 4-359 (449)
25 PRK04833 argininosuccinate lya 100.0 4.1E-67 8.8E-72 547.9 38.4 346 54-437 7-362 (455)
26 cd01359 Argininosuccinate_lyas 100.0 5.5E-67 1.2E-71 545.7 36.5 333 74-437 3-340 (435)
27 cd01334 Lyase_I Lyase class I 100.0 9.1E-67 2E-71 525.1 35.1 323 80-427 1-325 (325)
28 PRK05975 3-carboxy-cis,cis-muc 100.0 1.4E-66 3.1E-71 527.1 35.1 333 53-426 13-347 (351)
29 cd01360 Adenylsuccinate_lyase_ 100.0 1.4E-66 3.1E-71 534.5 35.3 341 54-437 1-344 (387)
30 PRK07492 adenylosuccinate lyas 100.0 2.1E-66 4.5E-71 539.1 36.1 345 53-437 3-350 (435)
31 PRK06705 argininosuccinate lya 100.0 1.9E-66 4.1E-71 547.7 35.4 332 74-437 32-370 (502)
32 PRK08470 adenylosuccinate lyas 100.0 3.4E-66 7.4E-71 539.2 36.2 340 54-437 4-347 (442)
33 PRK06390 adenylosuccinate lyas 100.0 4.1E-66 8.9E-71 540.4 33.1 354 47-437 2-359 (451)
34 PRK02186 argininosuccinate lya 100.0 2.4E-65 5.2E-70 574.0 37.9 353 53-438 413-771 (887)
35 PRK07380 adenylosuccinate lyas 100.0 4E-65 8.6E-70 529.0 36.3 341 54-437 4-347 (431)
36 cd03302 Adenylsuccinate_lyase_ 100.0 1E-64 2.3E-69 527.5 36.5 348 53-438 3-360 (436)
37 KOG1316 Argininosuccinate lyas 100.0 2.3E-65 5E-70 495.0 26.5 353 52-436 6-365 (464)
38 COG0015 PurB Adenylosuccinate 100.0 8.6E-64 1.9E-68 511.6 35.6 344 52-438 2-355 (438)
39 PRK12308 bifunctional arginino 100.0 1.8E-63 3.9E-68 538.9 37.7 331 76-437 21-362 (614)
40 PF00206 Lyase_1: Lyase; Inte 100.0 9.3E-65 2E-69 507.8 22.0 307 45-375 1-312 (312)
41 PRK06389 argininosuccinate lya 100.0 4.1E-63 8.9E-68 509.3 33.6 342 53-436 2-353 (434)
42 cd01598 PurB PurB_like adenylo 100.0 2.6E-60 5.7E-65 490.7 33.2 334 75-438 6-359 (425)
43 PLN02848 adenylosuccinate lyas 100.0 2.1E-59 4.6E-64 488.1 34.0 350 49-438 13-384 (458)
44 PRK09285 adenylosuccinate lyas 100.0 1.4E-58 3E-63 482.5 34.2 351 49-438 10-381 (456)
45 cd01594 Lyase_I_like Lyase cla 100.0 1.1E-35 2.4E-40 284.2 26.3 208 148-415 20-229 (231)
46 KOG2700 Adenylosuccinate lyase 100.0 7.1E-36 1.5E-40 299.1 18.7 353 47-437 6-372 (481)
47 PRK08937 adenylosuccinate lyas 99.9 2.3E-23 4.9E-28 198.2 13.7 120 313-437 22-144 (216)
48 KOG2700 Adenylosuccinate lyase 92.4 4.8 0.0001 42.2 15.1 128 208-378 224-357 (481)
49 PF10925 DUF2680: Protein of u 64.0 28 0.0006 26.4 5.9 38 78-115 11-49 (59)
50 PF08328 ASL_C: Adenylosuccina 31.4 1.1E+02 0.0023 26.5 5.0 47 390-437 4-50 (115)
51 COG2346 Truncated hemoglobins 23.4 3.5E+02 0.0075 24.0 6.9 61 44-115 59-120 (133)
52 PRK12683 transcriptional regul 22.7 3.9E+02 0.0085 26.2 8.2 46 212-257 44-89 (309)
53 PF02022 Integrase_Zn: Integra 22.7 80 0.0017 22.0 2.2 21 92-112 13-34 (40)
54 CHL00180 rbcR LysR transcripti 22.4 3.4E+02 0.0073 26.4 7.6 57 211-268 46-102 (305)
No 1
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=1.8e-119 Score=888.59 Aligned_cols=401 Identities=67% Similarity=1.029 Sum_probs=396.4
Q ss_pred cccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q 013614 36 SFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEV 114 (439)
Q Consensus 36 ~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev 114 (439)
++|+|+|+||+++||+|+|||+||+|+++||++|+. +||..+|+|++.+|+|+|++|.++| ||++.+++|.++|+||
T Consensus 2 ~~R~E~Dt~G~i~Vpad~~wgAQTqRs~~nF~ig~~--~mp~~~I~Al~~lKkaaA~~N~~LG~L~~~~a~aI~~Aadev 79 (462)
T COG0114 2 TYRIEHDTMGEVEVPADALWGAQTQRSLENFPIGGE--KMPREIIRALGLLKKAAAQVNADLGLLDPEKADAIIAAADEV 79 (462)
T ss_pred CcccccccCccccccHHHHHHHHHHHHHhcCCcccc--cCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999997 7999999999999999999999999 9999999999999999
Q ss_pred HcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHH
Q 013614 115 AEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRL 193 (439)
Q Consensus 115 ~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l 193 (439)
.+|+++++||+++||+||||++|||+||||++++.+++|++.|.+. ||||||||+||||||++|||||++...++.++|
T Consensus 80 ~~Gk~d~~FPl~VwQTGSGTqsNMN~NEVIanrA~e~~gg~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~~~L 159 (462)
T COG0114 80 LAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVVNRL 159 (462)
T ss_pred HcCcccCCCCeEEEecCCCccccccHHHHHHHHHHHHhCcccCCCCCCCCCCcCCcccccCcchhhHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999776 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCC
Q 013614 194 IPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKK 273 (439)
Q Consensus 194 ~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~ 273 (439)
+++|..|.++|.+|+++|.+++++||||+|||+|+||||+|++|+.+|.+.++|++.+.+.+..+++||||||||+|++|
T Consensus 160 iPaL~~L~~~L~~Ka~~~~~iVKiGRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAVGTGlNa~p 239 (462)
T COG0114 160 IPALKHLIKTLAAKAEEFADVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAIGGTAVGTGLNAHP 239 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCcccccccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccCcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCC
Q 013614 274 GFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSI 353 (439)
Q Consensus 274 ~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSi 353 (439)
+|++++.+++++.+|+++.+.+|+|++++++|.+++++++|..+|++|.|||+|||+|.||||||+|||++|+++|||||
T Consensus 240 ~f~ekva~~i~~~TG~~F~~a~NkF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lPenePGSSI 319 (462)
T COG0114 240 EFGEKVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALRTLAVSLMKIANDIRWLGSGPRCGLGEIELPENEPGSSI 319 (462)
T ss_pred cHHHHHHHHHHHHhCCCcccCCcHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHH
Q 013614 354 MPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISK 433 (439)
Q Consensus 354 MP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~ 433 (439)
||+|+||++||.+.++|.||+|+++++.++++.|+||+|+++|+++||+|+|++++++++..|.++|+.||++|+++|++
T Consensus 320 MPGKVNPtq~EA~tmv~~QV~Gnd~ai~~ags~GnFELNv~~Pvi~~N~LqS~~LLada~~~f~~~ci~gie~n~~~i~~ 399 (462)
T COG0114 320 MPGKVNPTQCEALTMVAAQVIGNDAAIAFAGSQGNFELNVFKPVIAYNFLQSVRLLADAMRSFADHCIVGIEPNEERIKE 399 (462)
T ss_pred CCCCCCchhHHHHHHHHHHHHcchHHHHHhhccCceeeccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 013614 434 LLHEV 438 (439)
Q Consensus 434 ~l~~~ 438 (439)
++++|
T Consensus 400 ~l~~S 404 (462)
T COG0114 400 LLERS 404 (462)
T ss_pred HHhhC
Confidence 99986
No 2
>KOG1317 consensus Fumarase [Energy production and conversion]
Probab=100.00 E-value=1.1e-111 Score=811.64 Aligned_cols=406 Identities=80% Similarity=1.184 Sum_probs=400.4
Q ss_pred ccccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 013614 33 YSTSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQ 112 (439)
Q Consensus 33 ~~~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~Gi~~~~a~~I~~a~~ 112 (439)
+.+++|+|+|+||+++||.|+|||+||+|+..||+|+|..+|||.++|+||..+|+|+|.+|.++|||+..+++|.+|++
T Consensus 24 ~~~~fR~E~DtfGe~~VP~DkyyGAQT~Rs~~NF~IGg~~ERMP~pii~AfGiLKkaaA~vN~~~GLDpkis~Ai~~Aad 103 (487)
T KOG1317|consen 24 MSSSFRTERDTFGEIEVPADKYYGAQTQRSLQNFKIGGERERMPEPIIQAFGILKKAAAEVNQEYGLDPKISKAISQAAD 103 (487)
T ss_pred cccchhhhccccCcccccchhhhhHHHHHHhhccccCCccccCchHHHHHHHHHHHHHHHHhHhhCCChHHHHHHHHHHH
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHH
Q 013614 113 EVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (439)
Q Consensus 113 ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~ 192 (439)
+|.+|++.+|||+++||+|+||++|||+||||.||++|++|++.|.+.+|||||||.+|||||.+||+||+++-.++...
T Consensus 104 eV~~GKL~dhFPLvvwQTGSGTQsNMN~NEVIsNrAieilGg~~GsK~VHPNdHvN~SQSSNDTFPtamHIa~~~ei~~~ 183 (487)
T KOG1317|consen 104 EVASGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEILGGKLGSKKVHPNDHVNKSQSSNDTFPTAMHIAAATEINSR 183 (487)
T ss_pred HHhcCcccccCceeEEecCCCccccCcHHHHHHHHHHHHhcccccCcccCCccccccccccCCccchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC
Q 013614 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (439)
Q Consensus 193 l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (439)
|++.|..|.++|..|++||+|++++||||.|||+|.|+||+|++|++++...++|+..+.+|+..+.+||+|||||+|..
T Consensus 184 L~P~l~~L~~aL~aKs~EfkdIiKIGRTHtqDAvPLTLGQEFsgY~qQ~~ngl~Rv~~~lpr~y~LA~GGTAVGTGLNTr 263 (487)
T KOG1317|consen 184 LIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQVTNGLQRVAATLPRLYQLAQGGTAVGTGLNTR 263 (487)
T ss_pred hhHHHHHHHHHHHhhhHHHHHHHHhcccccccccccchhhhhhhHHHHHHHHHHHHHhhhhHHHHHhcCCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccC
Q 013614 273 KGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSS 352 (439)
Q Consensus 273 ~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSS 352 (439)
++|++++++++++++||++..++|.|++++.||..+|++++|.+++++|.||++|||+++||||||+||+.||+++||||
T Consensus 264 ~GFaeK~a~~va~ltgLpFvtApNkFEALAahDA~VE~~GalNt~A~SlmKianDIRfLGSGPRcGlgEL~LPENEPGSS 343 (487)
T KOG1317|consen 264 KGFAEKIAARVAELTGLPFVTAPNKFEALAAHDAMVEVSGALNTIAVSLMKIANDIRFLGSGPRCGLGELMLPENEPGSS 343 (487)
T ss_pred ccHHHHHHHHHHHHhCCCceecccHHHHHHhhhhHHHhcccHHHHHHHHHHHhhhhhhccCCCCCCccccccCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHH
Q 013614 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (439)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~ 432 (439)
|||+|+||++||.+.++|.||+|+++++..++++|+||+|+|+|++..++|.++++++|++.+|.++|+.||+.|+||+.
T Consensus 344 IMPGKVNPTQcEamTmvcaQVMGN~vAvtvgGsnGhFELNVFKP~i~~nvL~SirLl~D~~~sF~~nCV~GI~aN~erI~ 423 (487)
T KOG1317|consen 344 IMPGKVNPTQCEAMTMVCAQVMGNHVAVTVGGSNGHFELNVFKPLIASNVLHSIRLLADASVSFTKNCVVGIEANKERIA 423 (487)
T ss_pred cCCCCCCcHHHHHHHHHHHHHhcCceEEEecccCceeEEecchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 013614 433 KLLHEV 438 (439)
Q Consensus 433 ~~l~~~ 438 (439)
+.+++|
T Consensus 424 kll~eS 429 (487)
T KOG1317|consen 424 KLLNES 429 (487)
T ss_pred HHHHhh
Confidence 999875
No 3
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-109 Score=813.65 Aligned_cols=403 Identities=45% Similarity=0.712 Sum_probs=394.7
Q ss_pred ccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q 013614 35 TSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQE 113 (439)
Q Consensus 35 ~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~e 113 (439)
+.+|+|+|.+|+.+||+++|||.||.|+++||++||......+.+++++..||+|+|.||.++| ||++.+++|.+|||+
T Consensus 2 ~~~R~E~D~lGe~~ip~evYyGI~TlRA~eNF~Is~~~~~~~p~~i~a~~~VKKAaAlaN~elg~l~~~~~~aIv~ACDe 81 (471)
T COG1027 2 TDMRIERDLLGEREIPAEVYYGIHTLRAVENFPISGLKISDVPEFIRAMAMVKKAAALANKELGALPKEIADAIVKACDE 81 (471)
T ss_pred CcchhhhhhcccccCcchhhhhhHHHHHHhcCCCcCCcccccHHHHHHHHHHHHHHHHhhhhhCCCCHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999998544459999999999999999999999 999999999999999
Q ss_pred HHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHH
Q 013614 114 VAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (439)
Q Consensus 114 v~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~ 192 (439)
+.+|+..++|++|++|+|+||++|||+||||+|++.|++|.++|.|. +|||||||++||+||++||++||.+...+ ..
T Consensus 82 il~Gk~~dqFvvD~~QGGAGTS~NMN~NEVIAN~AlE~lG~~KGeY~~~hPndhVNmsQSTND~yPTa~ria~~~~l-~~ 160 (471)
T COG1027 82 ILDGKCHDQFVVDVYQGGAGTSTNMNANEVIANRALELLGHEKGEYQYLHPNDHVNMSQSTNDAYPTAFRIAVYKSL-RK 160 (471)
T ss_pred HHcCccccccceeccccCCCccccccHHHHHHHHHHHHhcCCCCceeeeCCccccchhhcccccchhHHHHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999999997 99999999999999999999999998775 68
Q ss_pred HHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC
Q 013614 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (439)
Q Consensus 193 l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (439)
|.+.+..|++++..|++||++++++||||+|||+|+|+||+|.+|+..|.||++||..+.+++..+.+||||+|||+|++
T Consensus 161 L~~al~~L~~af~~Ka~EF~~ilKmGRTqLQDAvPmtlGqEF~Afa~~l~ed~~ri~~~~~~l~evNlGgTAiGTGiNa~ 240 (471)
T COG1027 161 LIDALEDLIEAFERKAKEFADILKMGRTQLQDAVPMTLGQEFGAFAVALKEDIKRIYRAAELLLEVNLGGTAIGTGINAP 240 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcChhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeeccCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccC
Q 013614 273 KGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSS 352 (439)
Q Consensus 273 ~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSS 352 (439)
++|.+.+.+++++.+|++..++.|.+|++++.|.+++++++|..+|..|+|||+|||+|+||||+|++||.||+.|+|||
T Consensus 241 ~~Y~~~vv~~l~evtg~~~~~A~~Lieatq~~~afv~vsg~lk~~Av~LsKI~NDlRLLsSGPr~Gl~EI~LP~~Q~GSS 320 (471)
T COG1027 241 KGYIELVVKKLAEVTGLPLVPAENLIEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAGSS 320 (471)
T ss_pred hhHHHHHHHHHHHHhCCCCccchhHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccCcccccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHH
Q 013614 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (439)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~ 432 (439)
|||+|+||+++|.+.++|.+|+|++.++.+++..|++|+|+|+|++.+++++|+.++.+++..|+++|++||++|+++|+
T Consensus 321 IMPgKVNPVipEvvnQvcf~ViGnD~tit~AaeaGQLqLNvmePvI~~~l~~Si~iL~na~~~l~ekcI~gItaN~e~C~ 400 (471)
T COG1027 321 IMPGKVNPVIPEVVNQVCFKVIGNDTTITMAAEAGQLQLNVMEPVIAYALFESISILTNACRNLREKCIDGITANEERCE 400 (471)
T ss_pred CCCCCcCchhHHHHHHHHHHHhcchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 013614 433 KLLHEV 438 (439)
Q Consensus 433 ~~l~~~ 438 (439)
+++++|
T Consensus 401 ~~v~nS 406 (471)
T COG1027 401 EYVENS 406 (471)
T ss_pred HHHHhh
Confidence 999876
No 4
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=1.8e-105 Score=836.27 Aligned_cols=400 Identities=57% Similarity=0.898 Sum_probs=388.3
Q ss_pred ccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 013614 37 FREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 115 (439)
Q Consensus 37 ~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~ 115 (439)
+|+|+|++|+++||.++|||+||+|+++||++||. ++|+++|++++.||+|+|.+|.+.| ||++++++|.++|++|.
T Consensus 2 ~r~e~d~~g~~~~p~~~~~g~~t~ra~~nf~~~~~--~~~~~~i~a~~~ik~Aha~~l~~~G~l~~~~~~~I~~al~ei~ 79 (464)
T PRK12425 2 SRTETDSLGPIEVPEDAYWGAQTQRSLINFAIGKE--RMPLAVLHALALIKKAAARVNDRNGDLPADIARLIEQAADEVL 79 (464)
T ss_pred CCcCcccCCCCCCcccccchHHHHHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999997 8999999999999999999999999 99999999999999999
Q ss_pred cCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHHH
Q 013614 116 EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLI 194 (439)
Q Consensus 116 ~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~ 194 (439)
+++..++|++++||+++|||+|||+||||++++.|++|++.|++. ||||+|||+||||||+++|+++|++++.+...|.
T Consensus 80 ~~~~~~~f~~~~~~~g~~ed~~mnvnevi~~~~~e~~G~~~g~~~~vhpn~~vh~g~S~ND~~~Ta~~L~~r~~l~~~l~ 159 (464)
T PRK12425 80 DGQHDDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEQLL 159 (464)
T ss_pred cCcccCCCCccCCCCCCcchHHHHHHHHHHHHHHHHhCcccccccccCchhcccCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 998889999999999999999999999999999999997778554 9999999999999999999999999877535899
Q ss_pred HHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCc
Q 013614 195 PNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG 274 (439)
Q Consensus 195 ~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~ 274 (439)
+.|..|+++|.+||++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|+||||+||+++++++
T Consensus 160 ~~L~~l~~~L~~~A~~~~~tim~GrTHlQ~A~PiT~G~~~~a~~~~l~rd~~RL~~~~~r~~~~plGggAvGT~~~~~~~ 239 (464)
T PRK12425 160 PAIAELSGGLAEQSARHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAALPAVCELAQGGTAVGTGLNAPHG 239 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCeeecccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCC
Q 013614 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIM 354 (439)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiM 354 (439)
|++.+.+.+++.|||+.++.+|++|++++||+++|++++|++++++|+|||+||++|+|+||+||||+.+|+.++|||||
T Consensus 240 ~~~~~~~~La~~LG~~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llsS~p~~g~~ei~lp~~~~GSSiM 319 (464)
T PRK12425 240 FAEAIAAELAALSGLPFVTAPNKFAALAGHEPLVSLSGALKTLAVALMKIANDLRLLGSGPRAGLAEVRLPANEPGSSIM 319 (464)
T ss_pred HHHHHHHHHHHHhCCCCcccccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCceEEECCCCCCCCCCC
Confidence 99999999999999999779999999999999999999999999999999999999999999999999999889999999
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHH
Q 013614 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (439)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~ 434 (439)
||||||+++|.++++|.+|+|+..+++.+..+++++.|.++|.+.++++++++.+.+++..+..+|+++|+||++||+++
T Consensus 320 PqK~NP~~~E~i~~~a~~v~G~~~~v~~~~~~~~~q~n~~~~~~~~~~l~s~~~l~~~~~~~~~~~i~~l~vn~erm~~~ 399 (464)
T PRK12425 320 PGKVNPTQCEALSMLACQVMGNDATIGFAASQGHLQLNVFKPVIIHNLLQSIRLLADGCRNFQQHCVAGLEPDAEQMAAH 399 (464)
T ss_pred CCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhc
Q 013614 435 LHEV 438 (439)
Q Consensus 435 l~~~ 438 (439)
++.+
T Consensus 400 l~~~ 403 (464)
T PRK12425 400 LERG 403 (464)
T ss_pred HHcc
Confidence 9864
No 5
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=2.3e-102 Score=813.47 Aligned_cols=401 Identities=42% Similarity=0.698 Sum_probs=388.2
Q ss_pred ccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q 013614 35 TSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQE 113 (439)
Q Consensus 35 ~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~e 113 (439)
.++|+|+|++|+++||.++|||+||+|+++||++++. ++|+.+|++++.+++|+|.+|.+.| |+++++++|.++|++
T Consensus 9 ~~~r~e~d~~g~~~~p~~~~~g~~t~ra~~~f~~~~~--~~~~~~i~~~~~v~~A~a~~l~~~G~l~~~~~~~I~~al~e 86 (479)
T PRK14515 9 NGVRIEKDFLGEKEVPNYAYYGVQTMRAVENFPITGY--KIHEGLIKAFAIVKKAAALANTDVGRLELNKGGAIAEAAQE 86 (479)
T ss_pred CCCccccccCCCCCCcccccchHHHHHHHHhccCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999998876 8999999999999999999999999 999999999999999
Q ss_pred HHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHH
Q 013614 114 VAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (439)
Q Consensus 114 v~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~ 192 (439)
|.+++..++|+++++|+|+||++|||+|||||+++.+++|++.|+|. ||||||||+||||||+++|+++|++++.+ ..
T Consensus 87 i~~~~~~~~f~~~~~~~g~~t~~nmnvnevie~~~~~~~G~~~g~~~~~hpnd~vn~grS~ND~v~Ta~~L~~~~~l-~~ 165 (479)
T PRK14515 87 ILDGKWHDHFIVDPIQGGAGTSMNMNANEVIANRALELLGMEKGDYHYISPNSHVNMAQSTNDAFPTAIHIATLNAL-EG 165 (479)
T ss_pred HHcCcccCCCCCCcccCCCcccccchHHHHHHHHHHHHhCcccCCccccCccccCCCCCCchhHHHHHHHHHHHHHH-HH
Confidence 99998889999999999999999999999999999999997778875 89999999999999999999999998765 69
Q ss_pred HHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC
Q 013614 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (439)
Q Consensus 193 l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (439)
|.+.|..|+++|.++|++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+||+++++
T Consensus 166 l~~~L~~L~~~L~~~A~~~~~~vm~GrTHlQ~A~PiT~G~~~~~~a~~l~r~~~RL~~~~~~l~~~pLG~gAvGT~~~~~ 245 (479)
T PRK14515 166 LLQTMGYMHDVFELKAEQFDHVIKMGRTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSRQHLYEVNMGATAVGTGLNAD 245 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccchhccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred CcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccC
Q 013614 273 KGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSS 352 (439)
Q Consensus 273 ~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSS 352 (439)
++|..++...+++.+|++.++.+|.+|++++||++++++++|+.++++|+|||+||++|+|+||+||+|+.+|++++|||
T Consensus 246 ~~~~~~~l~~la~~~gl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~kiA~Dl~llsS~p~~g~~Ei~lp~~~~GSS 325 (479)
T PRK14515 246 PEYIEAVVKHLAAISELPLVGAEDLVDATQNTDAYTEVSAALKVCMMNMSKIANDLRLMASGPRVGLAEIMLPARQPGSS 325 (479)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCcchHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCeeEEeCCCCCCCcC
Confidence 99999999999999999987788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHH
Q 013614 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (439)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~ 432 (439)
||||||||+.+|.++++|.+++|+..+++++..++++|+|.+.|++.++++.+++.+.+++..++++|++||+||++||+
T Consensus 326 iMP~KrNP~~~E~i~~~a~~v~G~~~~~~~~~~~~~le~n~~~p~i~~~l~~si~~l~~al~~~~~~~l~gl~vn~erm~ 405 (479)
T PRK14515 326 IMPGKVNPVMPEVINQIAFQVIGNDHTICLASEAGQLELNVMEPVLVFNLLQSISIMNNGFRAFTDNCLKGIEANEDRLK 405 (479)
T ss_pred CCCcccCchHHHHHHHHHHHHHhHHHHHHHHHhcccHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999999988899999999999999999999999999999999899999999999999
Q ss_pred HHHhhc
Q 013614 433 KLLHEV 438 (439)
Q Consensus 433 ~~l~~~ 438 (439)
+|++.+
T Consensus 406 ~~l~~s 411 (479)
T PRK14515 406 EYVEKS 411 (479)
T ss_pred HHHHhC
Confidence 999875
No 6
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=6e-100 Score=794.14 Aligned_cols=395 Identities=87% Similarity=1.287 Sum_probs=382.7
Q ss_pred CCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCC
Q 013614 44 FGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDH 122 (439)
Q Consensus 44 ~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~ 122 (439)
+|+++||.++|||+||+|+++||++||.+.++++++|++|+.||+|++.+|.+.| ||++++++|.++|+++.+++..++
T Consensus 1 ~g~~~~p~~~~~g~~t~ra~~nf~~~~~~~~~~~~~i~a~~~v~~A~a~~l~~~G~l~~~~a~~I~~al~ei~~~~~~~~ 80 (458)
T PLN00134 1 MGPIQVPADKLWGAQTQRSLQNFEIGGERERMPEPIVRAFGIVKKAAAKVNMEYGLLDPDIGKAIMQAADEVAEGKLDDH 80 (458)
T ss_pred CCCccCCcccchhHHHHHHHHhcCCCCCccCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCC
Confidence 6999999999999999999999999995558999999999999999999999999 999999999999999999888899
Q ss_pred CcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 123 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLH 201 (439)
Q Consensus 123 f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~ 201 (439)
|+++++|+|+||++|||+|||||++++|++|++.|+|. +|||||||+||||||+++|+++|+++++++..|.+.|..|+
T Consensus 81 f~~~~~~~g~g~~~~~~v~evie~~l~e~~g~~~g~~~~lHp~d~vh~G~S~nDiv~Ta~~L~~~~~~~~~l~~~l~~l~ 160 (458)
T PLN00134 81 FPLVVWQTGSGTQTNMNANEVIANRAAEILGGPVGEKSPVHPNDHVNRSQSSNDTFPTAMHIAAATEIHSRLIPALKELH 160 (458)
T ss_pred ccccccccCCcccccCcHHHHHHHHHHHHhCcccCCccccCcccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997788775 99999999999999999999999998776678999999999
Q ss_pred HHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHH
Q 013614 202 NSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIAS 281 (439)
Q Consensus 202 ~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~ 281 (439)
++|.++|++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+||+++++++|+.++++
T Consensus 161 ~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~~~~~v~~ 240 (458)
T PLN00134 161 ESLRAKSFEFKDIVKIGRTHLQDAVPLTLGQEFSGYATQVKYGLNRVQCTLPRLYELAQGGTAVGTGLNTKKGFDEKIAA 240 (458)
T ss_pred HHHHHHHHHhcCCccccccccCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCccCChhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCCCCCCch
Q 013614 282 AVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 361 (439)
Q Consensus 282 ~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP~K~NP~ 361 (439)
++++.|||+.++.+|++|++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|+.++|||||||||||+
T Consensus 241 ~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~p~~e~gev~lp~~~~GSSiMP~KrNPv 320 (458)
T PLN00134 241 AVAEETGLPFVTAPNKFEALAAHDAFVELSGALNTVAVSLMKIANDIRLLGSGPRCGLGELNLPENEPGSSIMPGKVNPT 320 (458)
T ss_pred HHHHHhCCCCCCCccHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcceEECCCCCCCCCCCCCCcCCH
Confidence 99999999987789999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred hhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 362 QCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 362 ~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
.+|.++++|+++.|+..++....+.++++.|+++|++.|.++++++.+.+++..+...|++||+||++||++|++.+
T Consensus 321 ~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~l~~l~vn~erm~~~l~~~ 397 (458)
T PLN00134 321 QCEALTMVCAQVMGNHVAITVGGSAGHFELNVFKPLIAYNLLHSIRLLGDASASFRKNCVRGIEANRERISKLLHES 397 (458)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhc
Confidence 99999999999999999999888899999999999999999999999999999998889999999999999999875
No 7
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=1.3e-99 Score=791.68 Aligned_cols=400 Identities=68% Similarity=1.055 Sum_probs=385.2
Q ss_pred ccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 013614 37 FREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 115 (439)
Q Consensus 37 ~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~ 115 (439)
+|+|+|++|+++||.++|||.||+|+++||+++|+ ++++++|++|+.||+|+|.+|.++| ||++.+++|.++|+++.
T Consensus 1 ~r~e~d~~g~~~~p~~~~~g~~t~r~~~~f~~~~~--~~~~~~i~a~~~ve~A~a~a~~~~Giip~~~a~~I~~a~~~i~ 78 (458)
T TIGR00979 1 FRIEKDSMGEIQVPADKYWGAQTQRSLENFKIGTE--KMPLELIHAFAILKKAAAIVNEDLGKLDAKKADAIVQAADEIL 78 (458)
T ss_pred CCCccccCCCCCCcccchhhHHHHHHHhcCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999998 7899999999999999999999999 99999999999999998
Q ss_pred cCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHHH
Q 013614 116 EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLI 194 (439)
Q Consensus 116 ~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~ 194 (439)
++..+++|+.++++++.+|++|||+|+||++++.+++|++.|++. +|||||||+|+||||+++|+++|++++.+...|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~m~~~~via~~l~e~~g~~~g~~~~vH~~d~vn~G~S~nDiv~Ta~~L~lr~~l~~~l~ 158 (458)
T TIGR00979 79 AGKLDDHFPLVVWQTGSGTQSNMNVNEVIANRAIELLGGKLGSKQPVHPNDHVNKSQSSNDTFPTAMHIAAVLAIKNQLI 158 (458)
T ss_pred hccccCCCceecccccccccccccHHHHHHHHHHHHcCcccCCCceeCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 877778999999999999999999999999999999997665433 9999999999999999999999999876536999
Q ss_pred HHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCc
Q 013614 195 PNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG 274 (439)
Q Consensus 195 ~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~ 274 (439)
+.|..|+++|.++|++|++++||||||+|||||+||||||++|+++|.|+++||..++++++.+||||||+||+++++++
T Consensus 159 ~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~ 238 (458)
T TIGR00979 159 PALENLKKTLDAKSKEFAHIVKIGRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLYELAIGGTAVGTGLNTHPG 238 (458)
T ss_pred HHHHHHHHHHHHHHHHccCCeeecccccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhcCCccCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCC
Q 013614 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIM 354 (439)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiM 354 (439)
|+.++.+++++.|||+.++.+|.++++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|++++|||||
T Consensus 239 ~~~~v~~~~a~~LGl~~~~~~n~~~~~~~rD~~~e~~~~La~la~~L~kia~Dl~llss~~~~e~gev~~p~~~~GSSiM 318 (458)
T TIGR00979 239 FDEKVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRCGLGELFIPENEPGSSIM 318 (458)
T ss_pred HHHHHHHHHHHHhCCCCeecCcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeEECCCCCCCCCCC
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHH
Q 013614 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (439)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~ 434 (439)
||||||+.+|.++++|+++.|+..+++.+...++++.|.++|.+.|+++++++.+.+++..++.+|+++|+||++||++|
T Consensus 319 P~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~erm~~n 398 (458)
T TIGR00979 319 PGKVNPTQCEALTMVCVQVMGNDATIGFAGSQGNFELNVFKPVIIYNFLQSVRLLSDAMESFRDHCVVGIEPNKERIQQL 398 (458)
T ss_pred CCCcCCHHHHHHHHHHHHHHhhHHHHHHHHHhccchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999999998889999999999999999999999999999999988999999999999999
Q ss_pred Hhhc
Q 013614 435 LHEV 438 (439)
Q Consensus 435 l~~~ 438 (439)
++.+
T Consensus 399 l~~~ 402 (458)
T TIGR00979 399 LNNS 402 (458)
T ss_pred HHcC
Confidence 9865
No 8
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=5.3e-99 Score=790.40 Aligned_cols=401 Identities=47% Similarity=0.727 Sum_probs=386.4
Q ss_pred ccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH
Q 013614 35 TSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQE 113 (439)
Q Consensus 35 ~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~e 113 (439)
.++|+|+|++|+++||.++|||.||+|+++||+++|. ++|+++|++|+.||+|+|.++.++| ||++++++|.++|++
T Consensus 3 ~~~r~~~d~~g~~~~~~~~~~g~~t~r~~~~f~~~~~--~~~~~~i~a~~~ve~A~a~~l~~~Glip~~~a~~I~~al~~ 80 (473)
T PRK13353 3 KNMRIEHDLLGEKEVPAEAYYGIQTLRAVENFPITGY--KIHPELIRAFAQVKKAAALANADLGLLPRRIAEAIVQACDE 80 (473)
T ss_pred CCcccccccCCCCCCcccccchHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999986 8999999999999999999999999 999999999999999
Q ss_pred HHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHH
Q 013614 114 VAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (439)
Q Consensus 114 v~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~ 192 (439)
+.++...++|+++++++++++++|||+|+||++++.+++|++.|+|. ||||||||+||||||+++|+++|++++.+ ..
T Consensus 81 i~~~~~~d~f~~~~~~~~~~~~~~~n~~~vi~~~l~e~~g~~~g~~~~~hp~d~vH~GrSrnD~v~Ta~~L~~r~~l-~~ 159 (473)
T PRK13353 81 ILAGKLHDQFIVDPIQGGAGTSTNMNANEVIANRALELLGGEKGDYHYVSPNDHVNMAQSTNDVFPTAIRIAALNLL-EG 159 (473)
T ss_pred HHhccccCCCCcchhhccccchhcchhhHHHHHHHHHHhCccccCCccCCcccCccCCCChhhHHHHHHHHHHHHHH-HH
Confidence 98877668999999999999999999999999999999997778765 99999999999999999999999998765 69
Q ss_pred HHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC
Q 013614 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (439)
Q Consensus 193 l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (439)
|.+.|..|+++|.+||++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+||+++++
T Consensus 160 l~~~L~~l~~~L~~~A~~~~~~im~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGT~~~~~ 239 (473)
T PRK13353 160 LLAAMGALQDVFEEKAAEFDHVIKMGRTQLQDAVPITLGQEFSAYARALKRDRKRIQQAREHLYEVNLGGTAVGTGLNAD 239 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccC
Q 013614 273 KGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSS 352 (439)
Q Consensus 273 ~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSS 352 (439)
++|..++++++++.|||+.++.+|.+|++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|++++|||
T Consensus 240 ~~~~~~~~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~la~la~~l~riA~Dl~llss~pr~e~gev~lp~~~~GSS 319 (473)
T PRK13353 240 PEYIERVVKHLAAITGLPLVGAEDLVDATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSSGPRTGLGEINLPAVQPGSS 319 (473)
T ss_pred hhHHHHHHHHHHHHhCCCCccccchHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCceEEECCCCCCCCC
Confidence 99999999999999999977788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHH
Q 013614 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (439)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~ 432 (439)
||||||||+.+|.++++|++++|+.++++.+..+++++.|.+.|.+..+++.+++.+.+++..+++.|++||+||++||+
T Consensus 320 iMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~vn~erm~ 399 (473)
T PRK13353 320 IMPGKVNPVMPEVVNQIAFQVIGNDVTITLAAEAGQLELNVMEPVIAFNLLESISILTNACRAFTDNCVKGIEANEERCK 399 (473)
T ss_pred CCCCCcCChHHHHHHHHHHHHHhHHHHHHHHHHcCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999999888889999999999989999999999999999999889999999999999
Q ss_pred HHHhhc
Q 013614 433 KLLHEV 438 (439)
Q Consensus 433 ~~l~~~ 438 (439)
+|++.+
T Consensus 400 ~~l~~~ 405 (473)
T PRK13353 400 EYVEKS 405 (473)
T ss_pred HHHHhC
Confidence 999875
No 9
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=6e-96 Score=767.16 Aligned_cols=404 Identities=45% Similarity=0.703 Sum_probs=381.2
Q ss_pred cccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH
Q 013614 34 STSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ 112 (439)
Q Consensus 34 ~~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ 112 (439)
|.++|+|+|+||+++||.+.|||.||+|+++||+++|...+++++++++|++|++|+|.++.++| ||++++++|.++|+
T Consensus 2 ~~~~r~~~~~~~~~~~~~~~~~~~~t~~~~~~f~~~~~~~~~~~~~~~~~l~ve~A~a~al~~~Gii~~~~a~~I~~al~ 81 (472)
T PRK12273 2 MMNTRIEKDLLGEREVPADAYYGIHTLRAVENFPISGVKISDYPELIRALAMVKKAAALANKELGLLDEEKADAIVAACD 81 (472)
T ss_pred CCCcccccccCCCcCCcccccchHHHHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 45699999999999999999999999999999999997434449999999999999999999999 99999999999999
Q ss_pred HHHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCc-ccccccccCCCCChhcHHHHHHHHHHHHHHHH
Q 013614 113 EVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSSNDTFPTVMHIAAAMETNS 191 (439)
Q Consensus 113 ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~-~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~ 191 (439)
++.++...++|+++.++++++++.|||+|++|++++.+++|++.|+| .+|||||||+|+||||+++|+++|++++.+ .
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~e~~~~~v~~~i~~~~~e~~g~~~~~~~~vHp~d~v~~GrSrnD~v~Ta~~L~lr~~l-~ 160 (472)
T PRK12273 82 EILAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDAYPTAIRIALLLSL-R 160 (472)
T ss_pred HHHhccccCCcccchhhccccchhhhHHHHHHHHHHHHHhCcccCCcceeCCCCCCCCCCCchHHHHHHHHHHHHHHH-H
Confidence 99877667789999999999999999999999998779998666655 399999999999999999999999998775 6
Q ss_pred HHHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCC
Q 013614 192 RLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNT 271 (439)
Q Consensus 192 ~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~ 271 (439)
.|.+.|..|+++|.++|++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+||++++
T Consensus 161 ~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~AqP~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~plGg~AvGT~~~i 240 (472)
T PRK12273 161 KLLDALEQLQEAFEAKAKEFADILKMGRTQLQDAVPMTLGQEFGAYAVALAEDRKRLYRAAELLREVNLGATAIGTGLNA 240 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCEEeecccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccceeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCccc
Q 013614 272 KKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGS 351 (439)
Q Consensus 272 ~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GS 351 (439)
+++|+.++.+++|+.|||+.++.+|.+|++++||+++|++++++.++++|+|||+||++|+|+||+|||||.+|++++||
T Consensus 241 ~~~~~~~v~~~~A~~LGf~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~rlA~Di~llss~e~~e~gev~lp~~~~GS 320 (472)
T PRK12273 241 PPGYIELVVEKLAEITGLPLVPAEDLIEATQDTGAFVEVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAGS 320 (472)
T ss_pred ChhHHHHHHHHHHHHcCCCcccCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCceEEECCCCCCcC
Confidence 99988999999999999997677899999999999999999999999999999999999999999999999999889999
Q ss_pred CCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHH
Q 013614 352 SIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERI 431 (439)
Q Consensus 352 SiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm 431 (439)
|||||||||+.+|.++++|+++.|+..+++.+..+++++.|...|.+...+++++..+..++..+..+|+++|+||++||
T Consensus 321 SiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~erm 400 (472)
T PRK12273 321 SIMPGKVNPVIPEVVNQVCFQVIGNDTTVTMAAEAGQLELNVMEPVIAYNLFESISILTNACRTLREKCIDGITANEERC 400 (472)
T ss_pred CCCCcccCcHHHHHHHHHHHHHhhhHHHHHHHHHcCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHH
Confidence 99999999999999999999999999999887778888888888888889999999999999999756999999999999
Q ss_pred HHHHhhc
Q 013614 432 SKLLHEV 438 (439)
Q Consensus 432 ~~~l~~~ 438 (439)
++|++.+
T Consensus 401 ~~~l~~~ 407 (472)
T PRK12273 401 REYVENS 407 (472)
T ss_pred HHHHHhC
Confidence 9999864
No 10
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=4.1e-95 Score=760.38 Aligned_cols=400 Identities=67% Similarity=1.032 Sum_probs=381.6
Q ss_pred cccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q 013614 36 SFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEV 114 (439)
Q Consensus 36 ~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev 114 (439)
++|+|+|++|+++||.++|||+++.|++++|++|+. ++|++++++|+.|++|+|.++.++| ||++.+++|.++|+++
T Consensus 3 ~~r~e~d~~g~~~~~~~~l~g~~~~~~~~~f~~s~~--~~~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~~i 80 (464)
T PRK00485 3 ETRIEKDSMGEVEVPADALWGAQTQRSLENFPIGGE--RMPRELIRALALLKKAAARVNAELGLLDAEKADAIVAAADEV 80 (464)
T ss_pred CcccccccCCCcCCccccccchhhHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999876 6899999999999999999999999 9999999999999999
Q ss_pred HcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCccc--CCcccccccccCCCCChhcHHHHHHHHHHHHHHHHH
Q 013614 115 AEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKR--GEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (439)
Q Consensus 115 ~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~--g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~ 192 (439)
.++..+++|+.++.+++.++++|||+|++|++++.+..|++. |++ +|+++|||+|+||||+++|+++|++++.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~-~h~~~~vh~G~SrnD~v~Ta~~L~lr~~l~~~ 159 (464)
T PRK00485 81 IAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKP-VHPNDHVNMSQSSNDTFPTAMHIAAVLAIVER 159 (464)
T ss_pred HhCccccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCc-cCccccCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 776667889999999999999999999999998877777544 445 99999999999999999999999997764269
Q ss_pred HHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC
Q 013614 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (439)
Q Consensus 193 l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (439)
|.+.|..|+++|.++|++|++++||||||+|+|||+||||||++|+++|.|+++||.+++++++.+||||||+||+++++
T Consensus 160 l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~PiTfG~~~~~~~~~l~R~~~RL~~~~~r~~~~pLGg~AvGT~~~~~ 239 (464)
T PRK00485 160 LLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAALPHLYELALGGTAVGTGLNAH 239 (464)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeeeeecCcCceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred CcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccC
Q 013614 273 KGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSS 352 (439)
Q Consensus 273 ~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSS 352 (439)
++|+.++++++|+.|||+.++.+|++|++++||+++|++++|+.++++|+|||+||++|+|+||+|||||.+|++++|||
T Consensus 240 ~~~~~~v~~~~A~~LGl~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~ria~Dl~l~ss~~~~e~gev~lp~~~~GSS 319 (464)
T PRK00485 240 PGFAERVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLASGPRCGLGEISLPENEPGSS 319 (464)
T ss_pred hhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEcCCCCCCCC
Confidence 99999999999999999976899999999999999999999999999999999999999999999999999999899999
Q ss_pred CCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHH
Q 013614 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (439)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~ 432 (439)
||||||||+.+|.++++|+++.|+..+++.++..+++|+|.++|.+.|+++++++.+.+++..++..|+++|+||++||+
T Consensus 320 iMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~v~~erm~ 399 (464)
T PRK00485 320 IMPGKVNPTQCEALTMVCAQVMGNDAAVTFAGSQGNFELNVFKPVIAYNFLQSIRLLADAMRSFADHCVVGIEPNRERIK 399 (464)
T ss_pred CCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHhccCcccccccChHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999999889999999999999899999999999999999999889999999999999
Q ss_pred HHHhhc
Q 013614 433 KLLHEV 438 (439)
Q Consensus 433 ~~l~~~ 438 (439)
+|++.+
T Consensus 400 ~~l~~~ 405 (464)
T PRK00485 400 ELLERS 405 (464)
T ss_pred HHHHhC
Confidence 999764
No 11
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=5.6e-94 Score=748.78 Aligned_cols=398 Identities=47% Similarity=0.748 Sum_probs=379.1
Q ss_pred cccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q 013614 38 REEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE 116 (439)
Q Consensus 38 r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~ 116 (439)
|+|+|++|+++||.+.|||.||+|++.||+++|. ++|++++++|++|++|+|.++.+.| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~--~~d~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~~i~~ 78 (450)
T cd01357 1 RIEHDLLGEREVPADAYYGIQTLRALENFPISGL--KIHPELIRALAMVKKAAALANAELGLLDEEKAEAIVKACDEIIA 78 (450)
T ss_pred CCCcccCCCcCCcccccchHHHHHHHHcCCCCCC--CcCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999986 8999999999999999999999999 999999999999999987
Q ss_pred CccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHHHH
Q 013614 117 GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIP 195 (439)
Q Consensus 117 ~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~ 195 (439)
+...++|+++++++++++++|||+|++|+.++.+++|++.|+|. +|||||||+|+||||+++|+++|++++.+ ..|.+
T Consensus 79 ~~~~d~~~~~~~~~~~~~~~~~~~~~vi~~~~~e~~g~~~g~~~~~h~~~~vH~GrSrnD~v~Ta~~L~lr~~l-~~l~~ 157 (450)
T cd01357 79 GKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDVYPTALRLALILLL-RKLLD 157 (450)
T ss_pred ccccCCCccchhhccccchhhhhHhHHHHHHHHHHhCccccCCcccCCcccccCCCChHhHHHHHHHHHHHHHH-HHHHH
Confidence 66668899999999999999999999999998899986667654 99999999999999999999999998765 69999
Q ss_pred HHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcc
Q 013614 196 NLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGF 275 (439)
Q Consensus 196 ~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~ 275 (439)
.|..|+++|.++|++|++++||||||+|+|||+|||||+++|+++|.|+++||.+++++++.+||||||+||+++++++|
T Consensus 158 ~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGt~~~~~~~~ 237 (450)
T cd01357 158 ALAALQEAFQAKAREFADVLKMGRTQLQDAVPMTLGQEFGAYATALKRDRARIYKARERLREVNLGGTAIGTGINAPPGY 237 (450)
T ss_pred HHHHHHHHHHHHHHHccCCEeeccccCcccccchHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCC
Q 013614 276 DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMP 355 (439)
Q Consensus 276 ~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP 355 (439)
+.++.+++++.|||+.++.+|.+|++++||++++++++|+.++++|+|||+||++|+|+||+|||||.+|++++||||||
T Consensus 238 ~~~v~~~~a~~LGl~~~~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~riA~Di~l~ss~e~~~~gev~~p~~~~GSSiMP 317 (450)
T cd01357 238 IELVVEKLSEITGLPLKRAENLIDATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSSGPRAGLGEINLPAVQPGSSIMP 317 (450)
T ss_pred HHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceeEECCCCCCcCCCCC
Confidence 89999999999999976778999999999999999999999999999999999999999999999999998899999999
Q ss_pred CCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHH
Q 013614 356 GKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLL 435 (439)
Q Consensus 356 ~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l 435 (439)
|||||+.+|.++++|+++.|+..+++++..+++++.|...|.+..+++.+++.+.+++..+...|+++|+||++||++|+
T Consensus 318 qKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~erm~~~l 397 (450)
T cd01357 318 GKVNPVIPEVVNQVAFQVIGNDLTITMAAEAGQLELNVFEPVIAYNLLESIDILTNAVRTLRERCIDGITANEERCREYV 397 (450)
T ss_pred CCcCcHHHHHHHHHHHHHhhHHHHHHHHHhcCcchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHH
Confidence 99999999999999999999999997767888888888888888899999999999999996569999999999999999
Q ss_pred hhc
Q 013614 436 HEV 438 (439)
Q Consensus 436 ~~~ 438 (439)
+.+
T Consensus 398 ~~~ 400 (450)
T cd01357 398 ENS 400 (450)
T ss_pred HhC
Confidence 865
No 12
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=9.3e-93 Score=740.66 Aligned_cols=400 Identities=41% Similarity=0.659 Sum_probs=377.4
Q ss_pred cccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q 013614 38 REEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE 116 (439)
Q Consensus 38 r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~ 116 (439)
|+|.|++|+++||.++|||.+|.|+++||+++|...+++++++++|++||.|+|.++.++| ||++++++|.++|+++.+
T Consensus 1 r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~i~~~l~ve~A~a~al~e~GiIp~~~a~~I~~al~~~~d 80 (468)
T TIGR00839 1 RIEEDLLGEREVPADAYYGIHTLRASENFYISNNKISDIPEFVRGMVMVKKAAALANKELGTIPESIANAIVAACDEILN 80 (468)
T ss_pred CCCcccCCCCCCcccccchHHHHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999997545559999999999999999999999 999999999999988765
Q ss_pred -CccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHHH
Q 013614 117 -GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLI 194 (439)
Q Consensus 117 -~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~ 194 (439)
+...+.|++++.++++||++|||+||||++++.+.+|++.|+|- +|||||||+|+||||+++|+++|++++. +..+.
T Consensus 81 ~~~~~~~~~l~~~~~~~g~~~~~~v~~vie~~l~e~~g~~~g~~~H~~p~~~v~~G~S~nD~v~Ta~~L~lr~~-l~~l~ 159 (468)
T TIGR00839 81 NGKCHDQFPVDVYQGGAGTSVNMNTNEVIANLALELMGHQKGEYQYLNPNDHVNKSQSTNDAYPTGFRIAVYSS-LIKLV 159 (468)
T ss_pred cccccccccccHHHccCccccccchHHHHHHHHHHHhCccccCeeecCCCCCCCCCCChhhHHHHHHHHHHHHH-HHHHH
Confidence 45556899999999999999999999999999999987788883 5799999999999999999999999776 57999
Q ss_pred HHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCc
Q 013614 195 PNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG 274 (439)
Q Consensus 195 ~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~ 274 (439)
+.|..|+++|.++|++|++++||||||+|+|||+||||||++|+++|.|+++||.+++++++.+||||||+||+++++++
T Consensus 160 ~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~ 239 (468)
T TIGR00839 160 DAINQLRDGFEQKAKEFADILKMGRTQLQDAVPMTLGQEFEAFSILLEEEVKNIKRTAELLLEVNLGATAIGTGLNTPPE 239 (468)
T ss_pred HHHHHHHHHHHHHHHHccCCeeeccccCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeCCCcCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCC
Q 013614 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIM 354 (439)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiM 354 (439)
+..++.+++++.|||+.++.+|.+|++++||+++|++++++.++++|+|||+||++|+|+|++|||||.+|.+++|||||
T Consensus 240 ~~~~v~~~~a~~LGl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~~s~~~~~~~ev~~~~~~~gSS~M 319 (468)
T TIGR00839 240 YSPLVVKKLAEVTGLPCVPAENLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIM 319 (468)
T ss_pred HHHHHHHHHHHHhCCCCCCCccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceEEeCCCCCCCCCCC
Confidence 89999999999999998767899999999999999999999999999999999999999999999999999879999999
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHH
Q 013614 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (439)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~ 434 (439)
||||||+.+|.++++|+++.|+..+++.+..+++++.+.+.|.+...++++++.+.+++..+...|+++|+||++||++|
T Consensus 320 PqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~vn~erm~~~ 399 (468)
T TIGR00839 320 PAKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQLNVMEPVIGQAMFESIHILTNACYNLTDKCVNGITANKEICEGY 399 (468)
T ss_pred CCCcCcHHHHHHHHHHHHHHhHHHHHHHHHhcCChHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999999776777888888888888888999999999999987788999999999999999
Q ss_pred Hhhc
Q 013614 435 LHEV 438 (439)
Q Consensus 435 l~~~ 438 (439)
++.+
T Consensus 400 l~~~ 403 (468)
T TIGR00839 400 VFNS 403 (468)
T ss_pred HHHh
Confidence 9864
No 13
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=6.5e-90 Score=718.66 Aligned_cols=399 Identities=70% Similarity=1.057 Sum_probs=380.1
Q ss_pred cccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q 013614 38 REEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE 116 (439)
Q Consensus 38 r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~ 116 (439)
|+|+|.+|++++|.++|||.+|.|+++||++|++ ..+++++++|+.||+|++.++.++| ||++.+++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~f~~~~~--~~~~~~i~~~l~ve~A~a~al~~~GiIp~~~a~~I~~al~~i~~ 78 (455)
T cd01362 1 RIEKDSMGEVEVPADALWGAQTQRSLENFPIGGE--RMPRELIRALGLLKKAAAQANAELGLLDEEKADAIVQAADEVIA 78 (455)
T ss_pred CCCcccCCCcCCccccchhHHHHHHHhccCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999987 6789999999999999999999999 999999999999999976
Q ss_pred CccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHHHH
Q 013614 117 GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIP 195 (439)
Q Consensus 117 ~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~ 195 (439)
...++.|+.++.+++.++++|||+|++|++++.++.|++.|+|. +|+++|||+|+||||+++|+++|++++.+.+.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~~~~~~~vH~G~SrnDiv~Ta~~L~lr~~l~~~l~~ 158 (455)
T cd01362 79 GKLDDHFPLVVWQTGSGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQERLLP 158 (455)
T ss_pred cccccCCceehhhccccccccccHHHHHHHHHHHhcCcccCCcCcCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 54568899999999999999999999999887777787788775 89999999999999999999999998776556999
Q ss_pred HHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcc
Q 013614 196 NLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGF 275 (439)
Q Consensus 196 ~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~ 275 (439)
.|..|+++|.++|++|++++||||||+|+|||+||||||++|+++|.|+++||..++++++.+||||||+||++++++.|
T Consensus 159 ~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~~ 238 (455)
T cd01362 159 ALKHLIDALDAKADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALPRLYELALGGTAVGTGLNAHPGF 238 (455)
T ss_pred HHHHHHHHHHHHHHHccCCeeeccccCCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcCCeeccCCccCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999998
Q ss_pred hHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCC
Q 013614 276 DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMP 355 (439)
Q Consensus 276 ~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP 355 (439)
+..+++++|+.|||+.++.+|++|++++||++++++++++.++++|+|||+||++|+|+||+|||||.+|++++||||||
T Consensus 239 ~~~v~~~~a~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~l~ria~Dl~~~~s~~~~e~gev~~~~~~~GSS~MP 318 (455)
T cd01362 239 AEKVAAELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSLPENEPGSSIMP 318 (455)
T ss_pred HHHHHHHHHHHhCCCCccCCCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCCceEECCCCCCCCCCCC
Confidence 89999999999999977889999999999999999999999999999999999999999999999999999899999999
Q ss_pred CCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHH
Q 013614 356 GKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLL 435 (439)
Q Consensus 356 ~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l 435 (439)
||+||+.+|.++++|+++.|+..++..+...++++.+.+.+...|.+++.++.+.+++..++..|+++|+||++||++|+
T Consensus 319 qKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~~rm~~~l 398 (455)
T cd01362 319 GKVNPTQCEALTMVAAQVMGNDAAITIAGSSGNFELNVFKPVIIYNLLQSIRLLADACRSFADKCVAGIEPNRERIAELL 398 (455)
T ss_pred CCCCcHHHHHHHHHHHHHhhhHHHHHHHHhcCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHH
Confidence 99999999999999999999999999888888999988888888999999999999999998789999999999999999
Q ss_pred hhc
Q 013614 436 HEV 438 (439)
Q Consensus 436 ~~~ 438 (439)
+.+
T Consensus 399 ~~~ 401 (455)
T cd01362 399 ERS 401 (455)
T ss_pred Hhc
Confidence 764
No 14
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=1.9e-87 Score=698.79 Aligned_cols=398 Identities=59% Similarity=0.880 Sum_probs=378.2
Q ss_pred cccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc
Q 013614 38 REEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE 116 (439)
Q Consensus 38 r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~ 116 (439)
|+|+|.+|++++|.++|||.++.|.+.+|+++++ +++++++++|+.|+.|++.++.+.| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~i~~ 78 (450)
T cd01596 1 RIEKDSLGEVEVPADAYYGAQTQRALENFPISGE--RMPPELIRALALVKKAAALANAELGLLDEEKADAIVQACDEVIA 78 (450)
T ss_pred CCCcccCCCCCCcccccccHhHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHc
Confidence 8999999999999999999999999999999976 7899999999999999999999999 999999999999999987
Q ss_pred CccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCccccccccc-CCCCChhcHHHHHHHHHHHHHHHHHHHH
Q 013614 117 GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHV-NRSQSSNDTFPTVMHIAAAMETNSRLIP 195 (439)
Q Consensus 117 ~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hv-n~g~SsnD~~~Ta~~l~~~~~~~~~l~~ 195 (439)
+..++.|+.++.+++.++++|||+|++|+.++.+.+|+..|+|.+||++|| |+|+||||+++|+++|++++. +..|.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~h~~~~v~h~g~SrnD~v~t~~~L~lr~~-l~~l~~ 157 (450)
T cd01596 79 GKLDDQFPLDVWQTGSGTSTNMNVNEVIANRALELLGGKKGKYPVHPNDDVNNSQSSNDDFPPAAHIAAALAL-LERLLP 157 (450)
T ss_pred CcccCCCcccHHhccCcccccchHHHHHHHHHHHHhccccCCcccCCCcccCCCCCCchHHHHHHHHHHHHHH-HHHHHH
Confidence 666688999999888999999999999998777888855576558999999 699999999999999999766 579999
Q ss_pred HHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcc
Q 013614 196 NLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGF 275 (439)
Q Consensus 196 ~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~ 275 (439)
.|..|+++|.++|++|++++||||||+|+|||+|||||+++|+++|.|+++||..++++++.+||||||+||++++++.|
T Consensus 158 ~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGg~A~Gt~~~~~~~~ 237 (450)
T cd01596 158 ALEQLQDALDAKAEEFADIVKIGRTHLQDAVPLTLGQEFSGYAAQLARDIARIEAALERLRELNLGGTAVGTGLNAPPGY 237 (450)
T ss_pred HHHHHHHHHHHHHHHhcCCeeeccccccCCeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcceeCCCCCChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCC
Q 013614 276 DVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMP 355 (439)
Q Consensus 276 ~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP 355 (439)
+.++.+++|++|||+.++.+|++||+++||++++++++++.++++|+|||+||++|+|+||+|||||.+|++++||||||
T Consensus 238 ~~~v~~~~a~~LGl~~~~~~n~~d~~~~rd~~~e~~~~la~~~~~l~ria~Dl~~~ss~~~~e~gev~~~~~~~GSS~MP 317 (450)
T cd01596 238 AEKVAAELAELTGLPFVTAPNLFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSSGPRAGLGEINLPANQPGSSIMP 317 (450)
T ss_pred HHHHHHHHHHHhCCCCccCcCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCeeEECCCCCCCCCCCC
Confidence 89999999999999976889999999999999999999999999999999999999999899999999999899999999
Q ss_pred CCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHH
Q 013614 356 GKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLL 435 (439)
Q Consensus 356 ~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l 435 (439)
|||||+.+|.|+++++++.|+..+++...+..++|++...|...++++++++.+.+++..++..++++|+||++||++|+
T Consensus 318 qKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l 397 (450)
T cd01596 318 GKVNPVIPEAVNMVAAQVIGNDTAITMAGSAGQLELNVFKPVIAYNLLQSIRLLANACRSFRDKCVEGIEANEERCKEYV 397 (450)
T ss_pred CCCCCHHHHHHHHHHHHHhccHHHHHHHhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHH
Confidence 99999999999999999999999999889999999999888878899999999999999999889999999999999999
Q ss_pred hhc
Q 013614 436 HEV 438 (439)
Q Consensus 436 ~~~ 438 (439)
+.+
T Consensus 398 ~~~ 400 (450)
T cd01596 398 ENS 400 (450)
T ss_pred HhC
Confidence 764
No 15
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=5.2e-73 Score=593.81 Aligned_cols=354 Identities=22% Similarity=0.299 Sum_probs=320.0
Q ss_pred cccCccChH----hHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCc
Q 013614 50 PSDKLWGAQ----TQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFP 124 (439)
Q Consensus 50 p~~~~~g~~----t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~ 124 (439)
+.+++||++ +.|+++||+++ . ++|+.+++++..+++|++.++.+.| ||++++++|.++|+++.++...+.|+
T Consensus 2 ~~~~~~g~~~~~~~~~~~~~~~~s-~--~~~~~~~~~~~~~~~Aha~~l~~~G~l~~~~a~~i~~al~~i~~~~~~~~~~ 78 (459)
T PRK00855 2 MSNKLWGGRFSEGPDELVERFTAS-I--SFDKRLAEEDIAGSIAHARMLAKQGILSEEEAEKILAGLDEILEEIEAGKFE 78 (459)
T ss_pred CcccccccCCCcchHHHHHHcccC-c--cchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCcc
Confidence 356799987 99999999888 3 6899999999999999999999999 99999999999999998887778898
Q ss_pred ccccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 125 LVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSL 204 (439)
Q Consensus 125 ~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL 204 (439)
+++ ++||+||| ||+++++++| +.|++ ||+ |+||||+++|+++|++++.+ ..|.+.|..|+++|
T Consensus 79 ~~~----~~~d~~~~----ie~~l~~~~g-~~g~~-iH~------g~SrnD~~~Ta~~L~~r~~l-~~l~~~L~~l~~~L 141 (459)
T PRK00855 79 FSP----ELEDIHMA----IEARLTERIG-DVGGK-LHT------GRSRNDQVATDLRLYLRDEI-DEIAELLLELQKAL 141 (459)
T ss_pred cCC----CCCcHHHH----HHHHHHHHhc-cccCc-ccC------CCCHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 876 57888888 7899999999 77777 885 99999999999999998775 69999999999999
Q ss_pred HHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHH
Q 013614 205 HSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAV 283 (439)
Q Consensus 205 ~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~l 283 (439)
.++|++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||+|+ ||++++++ +++
T Consensus 142 ~~~A~~~~~t~m~GrTH~Q~A~P~T~G~~l~~~~~~L~r~~~rL~~~~~~~~~~plGgaag~gt~~~~~r-------~~~ 214 (459)
T PRK00855 142 LDLAEEHADTIMPGYTHLQRAQPVTFGHHLLAYAEMLARDLERLRDARKRVNRSPLGSAALAGTTFPIDR-------ERT 214 (459)
T ss_pred HHHHHHcCCCEeecCcCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhcCCCCCcCH-------HHH
Confidence 9999999999999999999999999999999999999999999999999999999999988 99998877 469
Q ss_pred HHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchh
Q 013614 284 AEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQ 362 (439)
Q Consensus 284 a~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~ 362 (439)
++.|||+. +..|++||+++||++++++++|+.++++|+|||+||++|+|+ ||||+.+|+. ++|||||||||||+.
T Consensus 215 a~~LG~~~-~~~n~~~a~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~ss~---e~gei~~p~~~~~gSSiMPqK~NP~~ 290 (459)
T PRK00855 215 AELLGFDG-VTENSLDAVSDRDFALEFLSAASLLMVHLSRLAEELILWSSQ---EFGFVELPDAFSTGSSIMPQKKNPDV 290 (459)
T ss_pred HHHcCCCC-CCCCHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc---CCCeEeCCCCCCCCcCCCCCCCCCHH
Confidence 99999998 889999999999999999999999999999999999999974 8999999986 699999999999999
Q ss_pred hHHHHHHHHHHhhhhhHHHHhcccc--ccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 363 CEALTMVCAQVIGNHVAITVGGSNG--HFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 363 ~E~i~~~a~~v~G~~~~i~~~~~~~--~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
+|.++++|.+++|+..++....... .++++... ....+++++..+.+++..+.. |+++|+||+++|+++++.
T Consensus 291 ~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rD~~~--~~~~l~~~~~~~~~al~~~~~-~l~~l~v~~~~m~~~l~~ 364 (459)
T PRK00855 291 AELIRGKTGRVYGNLTGLLTVMKGLPLAYNRDLQE--DKEPLFDAVDTLKLSLEAMAG-MLETLTVNKERMREAAGK 364 (459)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhcCchHHhhhhhhh--hHHHHHHHHHHHHHHHHHHHH-HHccCEECHHHHHHHHHc
Confidence 9999999999999999987533332 23443322 123478888999999999976 999999999999999875
No 16
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=3.7e-73 Score=593.91 Aligned_cols=352 Identities=24% Similarity=0.303 Sum_probs=311.1
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCccccccc
Q 013614 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQT 130 (439)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~ 130 (439)
+.+||...++++ |+ ++++|++|++||+|+|.||+++| ||++.+++|.++|++ ++|+++.+++
T Consensus 9 ~~~~~~~~~~~i--~s--------~~~~i~a~l~ve~A~A~a~~~~G~ip~~~a~~I~~a~~~-------~~~d~~~~~~ 71 (452)
T PRK09053 9 DLYFGSPAMRAI--FS--------DRATVQRMLDFEAALARAEAACGVIPAAAVAPIEAACDA-------ERLDLDALAQ 71 (452)
T ss_pred hhhcCCHHHHHH--cC--------cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccc-------cCCCHHHHHH
Confidence 349999999999 73 89999999999999999999999 999999999999976 4689999999
Q ss_pred CCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 131 GSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVE 210 (439)
Q Consensus 131 ~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~ 210 (439)
+++++.|..+. .+ +.+.+.+|. .. .|+++|||+|+||||++||+++|++++. +..|.+.|..|+++|.+||++
T Consensus 72 ~~~~~~~~~~~-lv-~~l~~~~~~---~~-~~~~~~vH~G~SsnDi~~Ta~~l~lr~~-l~~l~~~l~~l~~~L~~~A~~ 144 (452)
T PRK09053 72 AAALAGNLAIP-LV-KQLTAQVAA---RD-AEAARYVHWGATSQDIIDTGLVLQLRDA-LDLLEPDLDRLCDALATLAAR 144 (452)
T ss_pred HHhhcCCchHH-HH-HHHHHHhcc---cC-cchhccccCCCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 99998885543 22 334555552 22 6889999999999999999999998766 579999999999999999999
Q ss_pred ccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCC
Q 013614 211 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLP 290 (439)
Q Consensus 211 ~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~ 290 (439)
|++++||||||+|||+|+||||||++|+++|.|+++||..++++++.+|||| ++|| .+..++++..+.+++++.|||+
T Consensus 145 ~~~t~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg-avGt-~~~~~~~~~~v~~~~a~~LGl~ 222 (452)
T PRK09053 145 HRATPMVGRTWLQQALPVTLGLKFAGWLDALLRHRQRLAALRPRALVLQFGG-AAGT-LASLGEQALPVAQALAAELQLA 222 (452)
T ss_pred ccCCeeehhccCCcceechHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc-hhhc-ccccccchHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999 5999 4556778888999999999999
Q ss_pred CccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHHHHH
Q 013614 291 FVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTM 368 (439)
Q Consensus 291 ~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~i~~ 368 (439)
.+..+ |+++||++++++++|+.++++|+|||+||++|+ ++|||||.+|. +++|||||||||||+.+|.+++
T Consensus 223 ~~~~~----~~~~rD~~~e~~~~la~la~~L~kia~Di~ll~---~~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~i~~ 295 (452)
T PRK09053 223 LPALP----WHTQRDRIAEFASALGLLAGTLGKIARDVSLLM---QTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLT 295 (452)
T ss_pred CCCCC----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchhhccccCCCCCcCCCCCCCCchHHHHHHH
Confidence 86554 358999999999999999999999999999999 57999998776 4799999999999999999999
Q ss_pred HHHHHhhhhhHHHHhccccccccccchhhHHHhHHH-HHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 369 VCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLH-SLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 369 ~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~-~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
+|+++.|+..++ +.++.+++|+|.+.|.++|..++ ++..+..++..+ .+|+++|+||++||++|++.+
T Consensus 296 ~a~~v~g~~~~~-~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~al~~~-~~~l~~l~v~~erm~~~l~~s 364 (452)
T PRK09053 296 AATRAPGLVATL-FAAMPQEHERALGGWHAEWDTLPELACLAAGALAQM-AQIVEGLEVDAARMRANLDLT 364 (452)
T ss_pred HHHHHHHHHHHH-HHhChhhhcccCCccHHHHHHHHHHHHHHHHHHHHH-HHHHcCCEECHHHHHHHHHhc
Confidence 999999999988 56788999999999999885555 455555555555 589999999999999999754
No 17
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-72 Score=574.80 Aligned_cols=354 Identities=23% Similarity=0.303 Sum_probs=318.6
Q ss_pred cCccCh----HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCccc
Q 013614 52 DKLWGA----QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLV 126 (439)
Q Consensus 52 ~~~~g~----~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~ 126 (439)
.++||+ .+...+..|..|. .+|..++..-...-.|++.++.+.| |++++++.|.+++.++.++...++|.++
T Consensus 3 ~~lwggRf~~~~~~~~~~~~~Si---~~D~~l~~~di~~s~AH~~mL~~~Gii~~ee~~~I~~~L~~l~~e~~~g~~~~~ 79 (459)
T COG0165 3 NKLWGGRFSGGPDPLVKEFNASI---SFDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEEIRAGKFELD 79 (459)
T ss_pred CCCCCCCccCCCcHHHHHHhccc---hhHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCCccCC
Confidence 357764 4555677887774 5788888888888999999999999 9999999999999999877656667776
Q ss_pred ccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 127 VWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHS 206 (439)
Q Consensus 127 ~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~ 206 (439)
+ ..||+|++ ||+++++++| +.|+| +|+ ||||||++.|++|||+++++ ..|...+..|+++|.+
T Consensus 80 ~----~~EDvH~a----iE~~L~~~iG-~~ggk-Lht------gRSRNDQVatd~rL~lr~~~-~~l~~~i~~l~~aL~~ 142 (459)
T COG0165 80 P----DDEDVHTA----IEARLIERIG-DVGGK-LHT------GRSRNDQVATDLRLWLRDKL-LELLELIRILQKALLD 142 (459)
T ss_pred C----ccccHHHH----HHHHHHHHHh-hhhch-hcc------ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 5 35666666 8999999999 89999 998 89999999999999999886 6999999999999999
Q ss_pred HHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHH
Q 013614 207 KSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAE 285 (439)
Q Consensus 207 ~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~ 285 (439)
+|++|.+++||||||+|+|||+|||||+.+|++.|.||++||..++++++.+|||+||. ||++++++ +.+|+
T Consensus 143 ~Ae~~~~~imPGyTHlQ~AQPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR-------~~tA~ 215 (459)
T COG0165 143 LAEEHAETVMPGYTHLQRAQPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDR-------ERTAE 215 (459)
T ss_pred HHHHccCCccCCcccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCH-------HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 99999999 57999
Q ss_pred HcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhH
Q 013614 286 ETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCE 364 (439)
Q Consensus 286 ~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E 364 (439)
+|||+. +..|++|++++||+++|+++++++++.+|+|||+||++|+|. |||+|++|+. ++|||||||||||+.+|
T Consensus 216 lLGF~~-~~~Nsldavs~Rdf~le~l~~~s~~~~~LSRlaedlI~wss~---EfgfI~l~D~~sTGSSIMPQKKNPD~~E 291 (459)
T COG0165 216 LLGFDA-VTRNSLDAVSDRDFILEFLSAAALIMVHLSRLAEDLILWSSP---EFGFIELPDEFSTGSSIMPQKKNPDVLE 291 (459)
T ss_pred HcCCch-hhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---cCceEeCCcccccccccCCCCCCCcHHH
Confidence 999997 899999999999999999999999999999999999999983 8999999997 99999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 365 ALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 365 ~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
.+|+++++|.|+..+++.....-++-.|--.-.....+++++..+.+++..++. ++++|+||+++|++.+.+
T Consensus 292 LiRgk~grv~G~l~~ll~~~k~lPlaYnrDlQedke~lfds~~t~~~~l~~~~~-mv~~l~vn~e~~~~a~~~ 363 (459)
T COG0165 292 LIRGKAGRVIGALTGLLTIMKGLPLAYNRDLQEDKEPLFDSVDTLEDSLRVLAG-MVSGLTVNKERMREAAEA 363 (459)
T ss_pred HHHHhhhhhHHHHHHHHHHHhcCcccccHHHHhhhHHHHHHHHHHHHHHHHHHH-HHccCeeCHHHHHHHhhc
Confidence 999999999999999988666555555432222345689999999999999975 999999999999998876
No 18
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=9.6e-71 Score=576.34 Aligned_cols=350 Identities=21% Similarity=0.241 Sum_probs=316.1
Q ss_pred HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCCCccc
Q 013614 58 QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQS 136 (439)
Q Consensus 58 ~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~g~~~ 136 (439)
.+...+..|..+- ..+..+++....++.|++.++.+.| ||++++++|.++|+++.++...++|++++++ ||+
T Consensus 9 ~~~~~~~~~~~~~---~~d~~l~~~~i~~~~Ah~~~L~~~G~l~~~~a~~I~~al~~i~~~~~~~~~~~~~~~----~d~ 81 (455)
T TIGR00838 9 GMDPRVAKFNASL---SFDKELAEYDIEGSIAHTKMLKKAGILTEEEAAKIIEGLNELKEEGREGPFILDPDD----EDI 81 (455)
T ss_pred CccHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCcCCCCCc----CcH
Confidence 3444455664222 4577888888889999999999999 9999999999999999988777889988875 555
Q ss_pred ccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcce
Q 013614 137 NMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVK 216 (439)
Q Consensus 137 ~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~~~~~ 216 (439)
|| +||+++.+++|++.|+| +|+ |+||||+++|+++|++++.+ ..|.+.|..|+++|.++|++|++++|
T Consensus 82 ~~----~ie~~l~e~~g~~~g~~-iH~------g~SrnD~~~Ta~~L~lr~~l-~~l~~~L~~l~~~L~~~A~~~~~~~m 149 (455)
T TIGR00838 82 HM----AIERELIDRVGEDLGGK-LHT------GRSRNDQVATDLRLYLRDHV-LELAEALLDLQDALIELAEKHVETLM 149 (455)
T ss_pred HH----HHHHHHHHHhCCCccCC-ccC------CCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHccCCEe
Confidence 55 58999999999777877 885 99999999999999998775 58999999999999999999999999
Q ss_pred eccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHHHcCCCCccCC
Q 013614 217 IGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAE 295 (439)
Q Consensus 217 ~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl~~~~~~ 295 (439)
|||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+ ||++++++ +++++.|||+. +..
T Consensus 150 ~grTH~Q~A~P~T~G~~~~~~~~~L~r~~~rL~~~~~~~~~~plGg~a~aGt~~~~~r-------~~~a~~LG~~~-~~~ 221 (455)
T TIGR00838 150 PGYTHLQRAQPITLAHHLLAYAEMLLRDYERLQDALKRVNVSPLGSGALAGTGFPIDR-------EYLAELLGFDA-VTE 221 (455)
T ss_pred ecccccccceeccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhcccCCCCCCCH-------HHHHHHcCCCC-CcC
Confidence 9999999999999999999999999999999999999999999999999 99988876 46999999998 578
Q ss_pred chhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhHHHHHHHHHHh
Q 013614 296 NKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVI 374 (439)
Q Consensus 296 n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~ 374 (439)
|++||+++||++++++++++.++++|+|||+||++|+|+ |||||.+|+. ++||||||||+||+.+|.++++|.++.
T Consensus 222 n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~ss~---e~gei~lp~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~ 298 (455)
T TIGR00838 222 NSLDAVSDRDFILELLFVAALIMVHLSRFAEDLILWSTG---EFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKTGRVQ 298 (455)
T ss_pred CHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCeeeCCCCCCCccCCCCCCcCChHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999985 6999999986 899999999999999999999999999
Q ss_pred hhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 375 GNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 375 G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
|+..+++.+..+++++.|...+.....+++++..+..++..+.. |+++|+||++||++++..+
T Consensus 299 g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~al~~~~~-~i~~l~v~~~rm~~~~~~~ 361 (455)
T TIGR00838 299 GNLTGMLMTLKALPLAYNRDLQEDKEPLFDALKTVELSLEMATG-MLDTITVNKERMEEAASAG 361 (455)
T ss_pred hhHHHHHHHHhcCChHhhhhhHhhHHHHHHHHHHHHHHHHHHHH-HHccCEECHHHHHHHHHcC
Confidence 99999998778888877777666667789999999999999975 9999999999999998653
No 19
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=5.6e-71 Score=578.45 Aligned_cols=351 Identities=23% Similarity=0.289 Sum_probs=308.9
Q ss_pred CccCh----HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccc
Q 013614 53 KLWGA----QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVV 127 (439)
Q Consensus 53 ~~~g~----~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~ 127 (439)
++||+ .+.+.+..|..|- .+|..+++.-..+.+|++.++.+.| ||++++++|.++|+++.++...++|++++
T Consensus 17 ~~w~~r~~~~~~~~~~~~~~s~---~~d~~l~~~di~~~~Aha~~L~~~Gii~~~~a~~I~~al~~i~~~~~~~~f~~~~ 93 (474)
T PLN02646 17 KLWGGRFEEGVTPAVEKFNESI---SFDKRLYKEDIMGSKAHASMLAKQGIITDEDRDSILDGLDEIEKEIEAGKFEWRP 93 (474)
T ss_pred hhhcCCCCCCccHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCCcCCC
Confidence 47765 4566677785443 4678888888889999999999999 99999999999999999887778887543
Q ss_pred cccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 128 WQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSK 207 (439)
Q Consensus 128 ~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~ 207 (439)
+ .||+||| ||+++.+++| +.|+| +|+ ||||||+++|+++|++++.+ ..|.+.|..|+++|.++
T Consensus 94 ---~-~ed~h~~----iE~~L~e~~G-~~g~~-lH~------grSrND~v~Ta~~L~lr~~l-~~l~~~L~~L~~~L~~~ 156 (474)
T PLN02646 94 ---D-REDVHMN----NEARLTELIG-EPAKK-LHT------ARSRNDQVATDTRLWCRDAI-DVIRKRIKTLQVALVEL 156 (474)
T ss_pred ---C-CCchHHH----HHHHHHHHhc-hhhCc-ccC------CCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 3 4888888 6789999998 67888 896 99999999999999998775 69999999999999999
Q ss_pred HHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHHH
Q 013614 208 SVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEE 286 (439)
Q Consensus 208 A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~ 286 (439)
|++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+ ||++++++ +++|++
T Consensus 157 A~~~~dtvmpGrTHlQ~AqPiT~G~~l~~~~~~l~rd~~RL~~~~~r~~~~pLGgga~aGt~~~idr-------~~~A~~ 229 (474)
T PLN02646 157 AEKNVDLVVPGYTHLQRAQPVLLSHWLLSHVEQLERDAGRLVDCRPRVNFCPLGSCALAGTGLPIDR-------FMTAKD 229 (474)
T ss_pred HHHcCCCEEecccCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhcCCCCCCCH-------HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998 99998887 469999
Q ss_pred cCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhHH
Q 013614 287 TSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEA 365 (439)
Q Consensus 287 LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E~ 365 (439)
|||.. +..|.+||+++||+++|++++++.++++|+|||+||++|+|+ ||||+.+|+. ++|||||||||||+++|.
T Consensus 230 LGf~~-~~~n~~da~~~RD~~~e~~~~la~ia~~LsRia~Dl~l~ss~---e~g~v~~~d~~~~GSSiMPqKrNP~~~E~ 305 (474)
T PLN02646 230 LGFTA-PMRNSIDAVSDRDFVLEFLFANSITAIHLSRLGEEWVLWASE---EFGFVTPSDAVSTGSSIMPQKKNPDPMEL 305 (474)
T ss_pred hCCCC-CCCChHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCeeeeCCCCCCCcCCCCCCCCCHHHHH
Confidence 99976 788999999999999999999999999999999999999974 6999999874 999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHhccccc--cccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 366 LTMVCAQVIGNHVAITVGGSNGH--FELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 366 i~~~a~~v~G~~~~i~~~~~~~~--~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
++++|++++|+..+++....+-+ ++++.. .....+++++..+.+++..+.. |+++|+||++||++++++
T Consensus 306 ir~~a~~v~G~~~~~~~~~~~~p~~~~rD~q--~~~~~l~~~~~~~~~~l~~~~~-~l~~l~v~~~rm~~~l~~ 376 (474)
T PLN02646 306 VRGKSARVIGDLVTVLALCKGLPTAYNRDLQ--EDKEPLFDSVDTVSDMLEVATE-FAQNITFNPERIKKSLPA 376 (474)
T ss_pred HHHHHHHHHhhhHHHHHHhcCCchHhhcchh--hHHHHHHHHHHHHHHHHHHHHH-HHccCEECHHHHHHHHHc
Confidence 99999999999999986543322 333321 1123478888888888888875 999999999999999975
No 20
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=9.2e-70 Score=566.69 Aligned_cols=348 Identities=24% Similarity=0.281 Sum_probs=302.1
Q ss_pred CccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccC
Q 013614 53 KLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 131 (439)
Q Consensus 53 ~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~ 131 (439)
.+||...++.+ |+ +++++++|+.||+|++.++.+.| ||++++++|.++++++. ++++.++++
T Consensus 4 ~~y~~~~~~~~--~s--------~~~~i~~~~~ve~A~a~~l~~~Gii~~~~a~~I~~al~~~~-------~~~~~~~~~ 66 (437)
T cd01597 4 DLFGTPAMREI--FS--------DENRVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADVER-------LDLEALAEA 66 (437)
T ss_pred cccCCHHHHHH--cC--------cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccccC-------CCHHHHHHH
Confidence 58999999999 73 78999999999999999999999 99999999999987751 123334434
Q ss_pred CCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 013614 132 SGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEF 211 (439)
Q Consensus 132 ~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~ 211 (439)
.+++.|.-+ .++..+.+++|++.|+| +|+ ||||||+++|+++|++++.+ ..+.+.|..|+++|.++|++|
T Consensus 67 ~~~~~~~v~--a~e~~l~e~~g~~~g~~-lH~------grSrnD~~~Ta~~l~lr~~l-~~l~~~l~~l~~~L~~~A~~~ 136 (437)
T cd01597 67 TARTGHPAI--PLVKQLTAACGDAAGEY-VHW------GATTQDIIDTALVLQLRDAL-DLLERDLDALLDALARLAATH 136 (437)
T ss_pred HHHhCCCcH--HHHHHHHHHcCccccCe-eec------CccHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 444433321 25667788999666777 885 99999999999999998775 799999999999999999999
Q ss_pred cCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCC
Q 013614 212 KDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPF 291 (439)
Q Consensus 212 ~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~ 291 (439)
++++||||||+|||||+||||||++|+++|.|+++||..++++++.+|||| |+|||.+ .+.++..+.+++++.|||+.
T Consensus 137 ~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-a~Gtg~~-~~~~~~~~~~~~a~~LGf~~ 214 (437)
T cd01597 137 RDTPMVGRTHLQHALPITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGG-AAGTLAS-LGDQGLAVQEALAAELGLGV 214 (437)
T ss_pred cCCeeehhhcCccceechHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc-ccccccc-cCCcHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999999 8888764 35566788899999999998
Q ss_pred ccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHHHHHH
Q 013614 292 VTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMV 369 (439)
Q Consensus 292 ~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~i~~~ 369 (439)
++ .+ |+++||++++++++++.++.+|+|||+||++|++ +|||||.+|+ .++||||||||+||+.+|.++++
T Consensus 215 ~~-~~---~~~~rd~~~e~~~~l~~~a~~l~rla~Dl~l~s~---~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~i~~~ 287 (437)
T cd01597 215 PA-IP---WHTARDRIAELASFLALLTGTLGKIARDVYLLMQ---TEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVAL 287 (437)
T ss_pred CC-Cc---cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccceeecccCCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 54 33 5799999999999999999999999999999995 6899999997 69999999999999999999999
Q ss_pred HHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 370 CAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 370 a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
|.+++|+.+++. ....+++|+|.+.|...|..++....+...+..+...|+++|+||++||+++++.
T Consensus 288 a~~~~g~~~~~~-~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~ 354 (437)
T cd01597 288 ARRVPGLAALLL-DAMVQEHERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDL 354 (437)
T ss_pred HHHHHHHHHHHH-HhchhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHh
Confidence 999999966654 4666899999999998888885555555555557778999999999999999975
No 21
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=1.4e-69 Score=547.26 Aligned_cols=334 Identities=23% Similarity=0.250 Sum_probs=298.2
Q ss_pred CccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccC
Q 013614 53 KLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 131 (439)
Q Consensus 53 ~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~ 131 (439)
.+||.+.++++ | .|++++++|+.||+|++.++.++| ||++++++|.++|+++. .+..+.+
T Consensus 4 ~~~~~~~~~~i--~--------sd~~~i~~~~~ve~A~a~al~~~Gii~~~~a~~I~~a~~~~~---------~d~~~~~ 64 (338)
T TIGR02426 4 GLFGDPAALEL--F--------SDRAFLRAMLDFEAALARAQADAGLIPAEAAAAIEAACAAAA---------PDLEALA 64 (338)
T ss_pred cccCCHHHHHH--c--------CCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhccCC---------CCHHHHH
Confidence 48999999999 6 389999999999999999999999 99999999999998752 2333333
Q ss_pred CCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 013614 132 SGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEF 211 (439)
Q Consensus 132 ~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~ 211 (439)
.++..+++..-.++..+.+++|++.|+| ||+ |+||||+++|+++|++++.+ ..+.+.|..|+++|.++|++|
T Consensus 65 ~~~~~~~~~~~~~~~~l~~~~g~~~g~~-vH~------G~S~nD~~~Ta~~L~lr~~l-~~l~~~l~~l~~~L~~~A~~~ 136 (338)
T TIGR02426 65 HAAATAGNPVIPLVKALRKAVAGEAARY-VHR------GATSQDVIDTSLMLQLRDAL-DLLLADLGRLADALADLAARH 136 (338)
T ss_pred hHHHhcCCcHHHHHHHHHHHhCccccCc-ccC------CCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 4455555553335667789999777877 885 99999999999999997764 799999999999999999999
Q ss_pred cCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCC
Q 013614 212 KDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPF 291 (439)
Q Consensus 212 ~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~ 291 (439)
++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|+|| |+|||.+. ++|+..+.+++++.|||+.
T Consensus 137 ~~~~m~grTH~Q~A~P~T~G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lGg-avGtg~~~-~~~~~~v~~~~a~~LGl~~ 214 (338)
T TIGR02426 137 RDTPMTGRTLLQQAVPTTFGLKAAGWLAAVLRARDRLAALRTRALPLQFGG-AAGTLAAL-GTRGGAVAAALAARLGLPL 214 (338)
T ss_pred CCCceecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcc-hhccCCCc-cchHHHHHHHHHHHhCcCC
Confidence 999999999999999999999999999999999999999999999999999 89998654 5677889999999999998
Q ss_pred ccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCCCCCCchhhHHHHHHHH
Q 013614 292 VTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCA 371 (439)
Q Consensus 292 ~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP~K~NP~~~E~i~~~a~ 371 (439)
+..+ |+++||+++|++++++.++++|+|||+||++|++ +||||+.++ .++|||||||||||+.+|.++++|+
T Consensus 215 ~~~~----~~~~rd~~~e~~~~l~~la~~l~ria~Dl~l~s~---~e~gei~~~-~~~GSSiMPqK~NP~~~E~i~~~a~ 286 (338)
T TIGR02426 215 PALP----WHTQRDRIAEFGSALALVAGALGKIAGDIALLSQ---TEVGEVFEA-GGGGSSAMPHKRNPVGAALLAAAAR 286 (338)
T ss_pred CCCc----chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCChhhhC-CCCCcccCCCCCCcHHHHHHHHHHH
Confidence 5332 5789999999999999999999999999999995 689999884 4799999999999999999999999
Q ss_pred HHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcc
Q 013614 372 QVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGI 424 (439)
Q Consensus 372 ~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl 424 (439)
++.|+..+++. .+.+++|++...|..+|.++++++.+.+++...+.+++++|
T Consensus 287 ~~~g~~~~~~~-~~~~~~Er~~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~l 338 (338)
T TIGR02426 287 RVPGLAATLHA-ALPQEHERSLGGWHAEWETLPELVRLTGGALRQAQVLAEGL 338 (338)
T ss_pred HHHHHHHHHHH-hchHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999988865 68899999999999999999999999999999999998875
No 22
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=1.1e-68 Score=558.14 Aligned_cols=347 Identities=24% Similarity=0.281 Sum_probs=304.7
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCccccc--
Q 013614 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVW-- 128 (439)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~-- 128 (439)
|.+||.+.++++ |+ +++++++|+.|++|++.++.++| ||+++++.|.+++ ++. .+++..+
T Consensus 2 ~~~y~~~~~~~i--fs--------~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~~-~~~------~~d~~~l~~ 64 (435)
T TIGR00928 2 DERYGTPEMRAI--WS--------EENKFKTWLDVEVALLRALAELGVIPAEAVKEIRAKA-NFT------DVDLARIKE 64 (435)
T ss_pred CcccCcHHHHHH--hC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhC-CCC------ccCHHHHHH
Confidence 458999999999 73 78999999999999999999999 9999999998872 211 0111111
Q ss_pred -ccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 129 -QTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSK 207 (439)
Q Consensus 129 -~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~ 207 (439)
....+.+ + ..+++.+.+++| +.|+| +|+ |+||||+++|+++|++++. +..+.+.|..|+++|.++
T Consensus 65 ~~~~~~~~----v-~~~e~~l~~~~g-~~~~~-vh~------g~SsnD~~~Ta~~l~lr~~-l~~l~~~l~~l~~~L~~~ 130 (435)
T TIGR00928 65 IEAVTRHD----V-KAVVYALKEKCG-AEGEF-IHF------GATSNDIVDTALALLLRDA-LEIILPKLKQLIDRLKDL 130 (435)
T ss_pred HHHHHCcC----h-HHHHHHHHHHhh-hhhhh-eee------cccHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 0011222 2 236788888998 66777 775 9999999999999999876 579999999999999999
Q ss_pred HHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHc
Q 013614 208 SVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEET 287 (439)
Q Consensus 208 A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~L 287 (439)
|++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|+|| |+||+++++++| ..+.+++++.|
T Consensus 131 A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgG-a~Gt~~~~~~~~-~~~~~~~a~~L 208 (435)
T TIGR00928 131 AVEYKDTVMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLLQAKERIKVGGISG-AVGTHAAAYPLV-EEVEERVTEFL 208 (435)
T ss_pred HHHHccchHhHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-hhhhHhhccccH-HHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999988 799999999887 78899999999
Q ss_pred CCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHH
Q 013614 288 SLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEA 365 (439)
Q Consensus 288 Gl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~ 365 (439)
||+.++.+| ++++||++++++++|+.++++|+|||+||++|++ +||+|+.+|. +++|||||||||||+.+|.
T Consensus 209 Gl~~~~~~~---~~~~rD~~~e~~~~l~~la~~L~ria~Dl~l~s~---~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~ 282 (435)
T TIGR00928 209 GLKPVPIST---QIEPRDRHAELLDALALLATTLEKFAVDIRLLQR---TEHFEVEEPFGKGQVGSSAMPHKRNPIDFEN 282 (435)
T ss_pred CCCCCCCCc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccceecccCCCCCCcCCCCcCcCcHHHHH
Confidence 999865433 6799999999999999999999999999999995 5899999986 3899999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 366 LTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 366 i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
++++|.++.|+.+.+.. ...+++|+|...|...|++++++..+..++..+..+|+++|+||++||+++++.+
T Consensus 283 i~~~a~~~~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~ 354 (435)
T TIGR00928 283 VCGLARVIRSVLSPALE-NVPLWHERDLTDSSVERIILPDSFILADIMLKTTLKVVKKLVVNPENILRNLELT 354 (435)
T ss_pred HHHHHHHHHHHHHHHHH-HhhHHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhc
Confidence 99999999999977764 4578899999999999998999999999999999999999999999999999753
No 23
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=1.1e-68 Score=549.61 Aligned_cols=337 Identities=25% Similarity=0.290 Sum_probs=297.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhC
Q 013614 75 MPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILG 153 (439)
Q Consensus 75 ~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg 153 (439)
.+++++++|++|+.|++.++.+.| ||++++++|.++++.+..+ ...-+.... ..+.+ + ..+++.+.+++|
T Consensus 6 s~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~l~~~~~d-~~~~~~~~~---~~~~~----v-~~~e~~L~~~~g 76 (381)
T cd01595 6 SEENKLRTWLDVEAALAEAQAELGLIPKEAAEEIRAAADVFEID-AERIAEIEK---ETGHD----V-IAFVYALAEKCG 76 (381)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcccCC-HHHHHHHHH---HhCcC----c-HHHHHHHHHHhh
Confidence 378999999999999999999999 9999999999999875211 100001110 11222 2 337888999999
Q ss_pred cccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhH
Q 013614 154 HKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQE 233 (439)
Q Consensus 154 ~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~ 233 (439)
++.|+| +|+ |+||||+++|+++|++++.+ ..+.+.|..|+++|.++|++|+|++||||||+|||||+|||||
T Consensus 77 ~~~~~~-vH~------g~S~nDi~~Ta~~l~lr~~l-~~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~Q~A~P~T~G~~ 148 (381)
T cd01595 77 EDAGEY-VHF------GATSQDINDTALALQLRDAL-DIILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFGKK 148 (381)
T ss_pred hHhhhH-eec------CcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCChHHhhcCCCCCcchhHHHH
Confidence 657887 885 99999999999999998775 6999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCCccCCchhhHhh-cchHHHHHHH
Q 013614 234 FSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALA-AHDAFVETSG 312 (439)
Q Consensus 234 ~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~-~rD~~~e~~~ 312 (439)
|++|+++|.|+++||.+++++++.+|+|| |+|||.+.++ ++..+.+++++.|||..+ .++|+. +||+++|+++
T Consensus 149 ~~~~~~~L~r~~~rL~~~~~~~~~~~lGg-a~G~g~~~~~-~~~~~~~~~a~~LGl~~~----~~~~~~~~rd~~~e~~~ 222 (381)
T cd01595 149 FAVWAAELLRHLERLEEARERVLVGGISG-AVGTHASLGP-KGPEVEERVAEKLGLKVP----PITTQIEPRDRIAELLS 222 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhccc-HhhhHhhcCC-cHHHHHHHHHHHcCCCCC----CCCCCcccchHHHHHHH
Confidence 99999999999999999999999999999 8888877655 677888999999999653 345544 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccc
Q 013614 313 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFE 390 (439)
Q Consensus 313 ~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e 390 (439)
+++.++.+|+|||+||++|+| +|||||.+|. +++|||||||||||+.+|.++++|+++.|+..+++... .+++|
T Consensus 223 ~l~~~~~~l~ria~Dl~~~~s---~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~e 298 (381)
T cd01595 223 ALALIAGTLEKIATDIRLLQR---TEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL-VQWHE 298 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHh---ccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHhh-hHhhc
Confidence 999999999999999999997 6899999996 48999999999999999999999999999999998755 88999
Q ss_pred cccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 391 LNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 391 ~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
+|...|.+.|+.++++..+..++..+...|+++|+||++||+++++.+
T Consensus 299 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~ 346 (381)
T cd01595 299 RDLSDSSVERNILPDAFLLLDAALSRLQGLLEGLVVNPERMRRNLDLT 346 (381)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999863
No 24
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=2.2e-68 Score=557.66 Aligned_cols=351 Identities=24% Similarity=0.271 Sum_probs=305.3
Q ss_pred ccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHH--HHcCccCCCCcc
Q 013614 49 VPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQE--VAEGKLNDHFPL 125 (439)
Q Consensus 49 ~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~e--v~~~~~~~~f~~ 125 (439)
-|-+.+||.+.++++ |+ |++++++|++||.|++.++.++| ||++.+++|.++|.+ +...... ...
T Consensus 4 ~~~~~~~~~~~~~~~--~s--------~~~~~~~~l~ve~A~a~~l~~~Giip~~~a~~I~~~l~~~~i~~~~~~-~~~- 71 (449)
T PRK08540 4 HPIDYRYGTPEMKRV--WS--------EENKLQKMLDVEAALARAEAELGLIPEEAAEEINRKASTKYVKLERVK-EIE- 71 (449)
T ss_pred CCcCcccCCHHHHHH--cC--------hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHHHH-HHH-
Confidence 467789999999999 73 88999999999999999999999 999999999999876 4211100 000
Q ss_pred cccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 126 VVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLH 205 (439)
Q Consensus 126 ~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~ 205 (439)
...+.++ ++ +++.+.+++|++.|+| +|+ |+||||+++|+++|++++.+ ..|.+.|..|+++|.
T Consensus 72 ----~~~~~~v-~~----~e~~L~~~~~~~~~~~-vH~------g~S~nDi~~Ta~~L~lr~~l-~~l~~~L~~l~~~L~ 134 (449)
T PRK08540 72 ----AEIHHDI-MA----VVKALSEVCEGDAGEY-VHF------GATSNDIIDTATALQLKDSL-EILEEKLKKLRGVLL 134 (449)
T ss_pred ----HHhCCCc-HH----HHHHHHHHhhhhhhcc-eec------CccHhhHHhHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 0112222 33 6778888996677887 885 99999999999999987765 799999999999999
Q ss_pred HHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHH
Q 013614 206 SKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAE 285 (439)
Q Consensus 206 ~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~ 285 (439)
++|++|++++||||||+|||||+||||||++|++.|.|+++||..++++++.+|||| |+||+.. .++++..+.+++++
T Consensus 135 ~~A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-avGt~~a-~~~~~~~i~~~~a~ 212 (449)
T PRK08540 135 KKAEEHKNTVCIGRTHGQHAVPTTYGMRFAIWASEIQRHLERLEQLKPRVCVGQMTG-AVGTQAA-FGEKGIEIQKRVME 212 (449)
T ss_pred HHHHHhcCCchhhhcCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHhhheccccc-cccchhh-CCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999764 46677788899999
Q ss_pred HcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEc--CCCCcccCCCCCCCCchhh
Q 013614 286 ETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELIL--PENEPGSSIMPGKVNPTQC 363 (439)
Q Consensus 286 ~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~l--p~~~~GSSiMP~K~NP~~~ 363 (439)
.|||+.++..| ++++||++++++++++.++++|+|||+||++|+ ++|||||.+ |++++|||||||||||+.+
T Consensus 213 ~LGl~~~~~~~---~~~~rd~~~e~~~~l~~~a~~l~kia~Dl~l~s---~~e~gei~e~~~~~~~GSSiMP~K~NP~~~ 286 (449)
T PRK08540 213 ILGLKPVLISN---QVIQRDRHAEFMMFLANIATTLDKIGLEIRNLQ---RTEIGEVEEEFGKKQVGSSTMPHKRNPITS 286 (449)
T ss_pred HcCCCCCCCcC---CccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhhhhhhcccCCCCCCcCCCCCCcCcHHH
Confidence 99999865444 469999999999999999999999999999999 579999985 5679999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 364 EALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 364 E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
|.++++|.++.|....+.. ....+++++...|...|.+++.+..+.+++..+...|+++|+||++||++|++.
T Consensus 287 E~i~~~a~~~~g~~~~~~~-~~~~~~~rd~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~ 359 (449)
T PRK08540 287 EQICGLARVVRSNVEPALL-NNPLWDERDLTNSSCERIIFPESCVLTDHILKLMIKVLEGLRFNPENIRRNLEL 359 (449)
T ss_pred HHHHHHHHHHHHHHHHHHh-cchhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHH
Confidence 9999999999999876543 455567888888888899999999999999999999999999999999999874
No 25
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=4.1e-67 Score=547.92 Aligned_cols=346 Identities=20% Similarity=0.270 Sum_probs=292.7
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHH---HH--HHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccc
Q 013614 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGI---LK--KCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVV 127 (439)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~---v~--~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~ 127 (439)
+|+.+....+..|+ +...++.++. |+ .|++.++.++| ||++++++|.++|+++.++.. .++...
T Consensus 7 r~~~~~~~~~~~~~--------~~~~~d~~l~~~~i~~~~Aha~~l~e~Gii~~~~a~~I~~al~~i~~~~~--~~~~~~ 76 (455)
T PRK04833 7 RFTQAADQRFKQFN--------DSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQQQLEEALNELLEEVR--ANPQQI 76 (455)
T ss_pred ccCCcchHHHHHHh--------ccHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhh--cCCccc
Confidence 45554334444573 3455666666 77 99999999999 999999999999999865421 122333
Q ss_pred cccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 128 WQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSK 207 (439)
Q Consensus 128 ~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~ 207 (439)
++.+ .++ ++++|++++.+++| +.|+| +|+ |+||||+++|+++|++++.+ ..+.+.|..|+++|.++
T Consensus 77 ~~~~-~ed----v~~~ie~~L~~~~g-~~g~~-lH~------grSrnD~~~Ta~rl~~r~~l-~~l~~~l~~l~~~L~~~ 142 (455)
T PRK04833 77 LASD-AED----IHSWVEGKLIDKVG-DLGKK-LHT------GRSRNDQVATDLKLWCKDQV-AELLTALRQLQSALVET 142 (455)
T ss_pred CCCC-Cch----HHHHHHHHHHHHhc-cccCc-ccC------CCCchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 3333 333 88889999999998 67888 885 99999999999999998775 69999999999999999
Q ss_pred HHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHHH
Q 013614 208 SVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEE 286 (439)
Q Consensus 208 A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~ 286 (439)
|++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.|||||+|+ ||++++++ +++|++
T Consensus 143 A~~~~~tvm~GrTH~Q~AqP~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgaA~~GT~~~~dr-------~~~a~~ 215 (455)
T PRK04833 143 AENNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTAYEIDR-------EQLAGW 215 (455)
T ss_pred HHHcCCCEEeccccCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCCCH-------HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999887 99999876 689999
Q ss_pred cCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhHH
Q 013614 287 TSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEA 365 (439)
Q Consensus 287 LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E~ 365 (439)
|||+. +..|.+|++++||++++++++|+.++++|+|||+||++|+|+ |||++++|+. ++|||||||||||+.+|.
T Consensus 216 LGf~~-~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~ss~---e~g~~el~~~~~~gSSiMPqKrNP~~~E~ 291 (455)
T PRK04833 216 LGFAS-ATRNSLDSVSDRDHVLELLSDASISMVHLSRFAEDLIFFNSG---EAGFVELSDRVTSGSSLMPQKKNPDALEL 291 (455)
T ss_pred hCCCC-CCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCceeeCCCCCCCcccCCCCCCChHHHH
Confidence 99998 688999999999999999999999999999999999999974 7898888875 899999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHhccccc--cccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 366 LTMVCAQVIGNHVAITVGGSNGH--FELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 366 i~~~a~~v~G~~~~i~~~~~~~~--~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
++++|+++.|+.++++....+.+ ++++...+. ..+++++..+.+++..+ ..|+++|+||++||++++..
T Consensus 292 ir~~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~~--~~l~~~~~~~~~~l~~~-~~~l~~l~v~~~rm~~~~~~ 362 (455)
T PRK04833 292 IRGKCGRVQGALTGMLMTLKGLPLAYNKDMQEDK--EGLFDALDTWLDCLHMA-ALVLDGIQVKRPRCQEAAQQ 362 (455)
T ss_pred HHHHHHHHHhhHHHHHHHHhCChHHHhhhhhhhH--HHHHHHHHHHHHHHHHH-HHHHhhCeECHHHHHHHHHc
Confidence 99999999999999886444333 344433332 45677777777755555 57999999999999999764
No 26
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=5.5e-67 Score=545.68 Aligned_cols=333 Identities=22% Similarity=0.265 Sum_probs=291.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHh
Q 013614 74 RMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEIL 152 (439)
Q Consensus 74 ~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~l 152 (439)
..|++++++|+.|++|++.++.+.| ||++.+++|.++|+++.++...+.|+.++ .+++.++++++ .+.+++
T Consensus 3 ~~d~~~~~~~~~ve~A~a~al~~~Gii~~~~a~~I~~al~~~~~~~~~~~~~~~~----~~~~~~~~~e~----~l~~~~ 74 (435)
T cd01359 3 SFDRRLFEEDIAGSIAHAVMLAEQGILTEEEAAKILAGLAKIRAEIEAGAFELDP----EDEDIHMAIER----RLIERI 74 (435)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCccCCC----CCCcHHHHHHH----HHHHHH
Confidence 3578999999999999999999999 99999999999999987654456777654 46777888654 456777
Q ss_pred CcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhh
Q 013614 153 GHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 232 (439)
Q Consensus 153 g~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~ 232 (439)
| +.|+| ||+ |+||||+++|+++|++++.+ ..|.+.|..|+++|.++|++|++++||||||+|||||+||||
T Consensus 75 g-~~~~~-iH~------G~SsnDi~~Ta~~L~lr~~l-~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~ 145 (435)
T cd01359 75 G-DVGGK-LHT------GRSRNDQVATDLRLYLRDAL-LELLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFGH 145 (435)
T ss_pred H-HHHhh-hhc------cCCHHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCEecCCCCCccceeccHHH
Confidence 7 66777 885 99999999999999998775 699999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHH
Q 013614 233 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETS 311 (439)
Q Consensus 233 ~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~ 311 (439)
||++|+++|.|+++||.+++++++.+||||+++ ||+++.++ +++++.|||+. +..|.++++++||++++++
T Consensus 146 ~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaag~gt~~~~~~-------~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~ 217 (435)
T cd01359 146 YLLAYAEMLERDLERLADAYKRVNVSPLGAGALAGTTFPIDR-------ERTAELLGFDG-PTENSLDAVSDRDFVLEFL 217 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHcCCCC-CccCHHHHHhcchHHHHHH
Confidence 999999999999999999999999999999776 78887666 57999999996 7788889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccc--cc
Q 013614 312 GALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN--GH 388 (439)
Q Consensus 312 ~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~--~~ 388 (439)
++|+.++++|+|||+||++|+|+ |||||.+|+. .+|||||||||||+.+|.++++|.++.|+..++..+..+ .+
T Consensus 218 ~~l~~~a~~l~ria~Dl~l~~~~---e~gev~lpe~~~~GSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 294 (435)
T cd01359 218 SAAALLMVHLSRLAEDLILWSTQ---EFGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPLA 294 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC---CCCeeeCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhhHHhHHHHHhcCCCCc
Confidence 99999999999999999999974 6999999987 599999999999999999999999999999999875533 22
Q ss_pred cccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 389 FELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 389 ~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
++++... ...++++++..+..++..+.. ++++|+||+++|+++++.
T Consensus 295 ~~~d~~~--~~~~l~~~~~~~~~al~~~~~-~l~~l~v~~~~m~~~l~~ 340 (435)
T cd01359 295 YNKDLQE--DKEPLFDAVDTLIASLRLLTG-VISTLTVNPERMREAAEA 340 (435)
T ss_pred cchhHHH--hhHHHHHHHHHHHHHHHHHHH-HHhhCEECHHHHHHHHhc
Confidence 3332211 123567778888888888865 999999999999999864
No 27
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=9.1e-67 Score=525.10 Aligned_cols=323 Identities=39% Similarity=0.485 Sum_probs=277.6
Q ss_pred HHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCC
Q 013614 80 VRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE 158 (439)
Q Consensus 80 i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~ 158 (439)
+++|+.+|+|++.++.+.| ||++++++|.++|+++..+..... ..+++.+++.++++ ++.+.+++|++.|+
T Consensus 1 ~~~~l~ve~A~a~al~~~Gli~~~~a~~I~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~----e~~l~~~~g~~~~~ 72 (325)
T cd01334 1 IRADLQVEKAHAKALAELGLLPKEAAEAILAALDEILEGIAADQ----VEQEGSGTHDVMAV----EEVLAERAGELNGG 72 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhCccccC----eeeCCCCccHHHHH----HHHHHHHhccccCC
Confidence 3678999999999999999 999999999999999865432221 23456677777775 55667788865467
Q ss_pred cccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHH
Q 013614 159 KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYT 238 (439)
Q Consensus 159 ~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~ 238 (439)
| +|+ |+||||+++|+++|++++.+ ..+.+.|.+++++|.++|++|++++||||||+|||||+|||||+++|+
T Consensus 73 ~-lH~------G~S~nDi~~ta~~l~lr~~~-~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~ 144 (325)
T cd01334 73 Y-VHT------GRSSNDIVDTALRLALRDAL-DILLPALKALIDALAAKAEEHKDTVMPGRTHLQDAQPTTLGHELAAWA 144 (325)
T ss_pred C-Ccc------CCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHccCcEeecccccccCccccHHHHHHHHH
Confidence 7 775 99999999999999997764 699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHH
Q 013614 239 TQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVA 318 (439)
Q Consensus 239 ~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la 318 (439)
++|.|+++||.+++++++.+|||+||+||+...++ .+.+++++.|||.. +.+|+++++++||+++|++++++.++
T Consensus 145 ~~l~r~~~rL~~~~~~~~~~~lG~gA~g~~~~~~~----~~~~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~~~l~~~~ 219 (325)
T cd01334 145 AELERDLERLEEALKRLNVLPLGGGAVGTGANAPP----IDRERVAELLGFFG-PAPNSTQAVSDRDFLVELLSALALLA 219 (325)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCcHhHHhCcCCCCc----chHHHHHHHhcCcC-cCcCHHHHHhCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999889977654433 34578999999965 67999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhh
Q 013614 319 ASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPM 397 (439)
Q Consensus 319 ~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~ 397 (439)
.+|+|||+|+++|+| +||||+.+|+. ++|||||||||||+.+|.++++|+++.|...++..+..+.+++.+...+.
T Consensus 220 ~~l~ria~Dl~~~~~---~e~gev~~~~~~~~gSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 296 (325)
T cd01334 220 VSLSKIANDLRLLSS---GEFGEVELPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGGPLEDNVDSPV 296 (325)
T ss_pred HHHHHHHHHHHHHcC---CCCCeEECCCCCCCCcccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHhcCchhhhcccHH
Confidence 999999999999997 48999999987 89999999999999999999999999999999988777777765544444
Q ss_pred HHHhHHHHHHHHHHHHHHHHHhhhhcceeC
Q 013614 398 IASGLLHSLRLLGDASASFEKNCVRGIQAN 427 (439)
Q Consensus 398 ~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn 427 (439)
....+++.+..+.+++..+. .++++|+||
T Consensus 297 ~~~~l~~~~~~~~~~l~~~~-~~~~~l~v~ 325 (325)
T cd01334 297 EREALPDSFDLLDAALRLLT-GVLEGLEVN 325 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhCcCEeC
Confidence 44455566666666666665 588999997
No 28
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=1.4e-66 Score=527.14 Aligned_cols=333 Identities=20% Similarity=0.234 Sum_probs=291.9
Q ss_pred CccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccC
Q 013614 53 KLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 131 (439)
Q Consensus 53 ~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~ 131 (439)
.+||.+.++.+ |+ +++++++|+.||+|+|.+|.++| ||++.+++|.++|+++. .+..+-+
T Consensus 13 ~~~~~~~~~~~--~s--------~~~~i~a~l~vE~A~a~a~~~~G~Ip~~~a~~I~~a~~~~~---------~d~~~~~ 73 (351)
T PRK05975 13 GLFGDDEIAAL--FS--------AEADIAAMLAFEAALAEAEAEHGIIPAEAAERIAAACETFE---------PDLAALR 73 (351)
T ss_pred ccCCCHHHHHH--cC--------cHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCC---------CCHHHHh
Confidence 48999999999 73 78999999999999999999999 99999999999997642 1111111
Q ss_pred CCcccc-cchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 132 SGTQSN-MNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVE 210 (439)
Q Consensus 132 ~g~~~~-~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~ 210 (439)
.++..+ +++++++ ..+.+.+|++.|+| || +|+||||++||+++|++++. +..|.+.|..|+++|.++|++
T Consensus 74 ~~~~~~g~~v~~~v-~~l~~~~g~~~~~~-vH------~G~TsnDi~dTa~~L~lr~~-l~~l~~~L~~l~~~L~~lA~~ 144 (351)
T PRK05975 74 HATARDGVVVPALV-RQLRAAVGEEAAAH-VH------FGATSQDVIDTSLMLRLKAA-SEILAARLGALIARLDALEAT 144 (351)
T ss_pred hHHHhcCCcHHHHH-HHHHHHhCchhhCc-cc------CCCChhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 122222 5666765 45567787666666 66 59999999999999998766 579999999999999999999
Q ss_pred ccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCC
Q 013614 211 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLP 290 (439)
Q Consensus 211 ~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~ 290 (439)
|++|+|+||||+|||+|+||||||++|+++|.|+++||.+++++++.+|||| |+||+.+. ++++..+.+++++.|||+
T Consensus 145 ~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lGG-AvGt~~~~-~~~~~~~~~~~a~~LGl~ 222 (351)
T PRK05975 145 FGQNALMGHTRMQAAIPITVADRLASWRAPLLRHRDRLEALRADVFPLQFGG-AAGTLEKL-GGKAAAVRARLAKRLGLE 222 (351)
T ss_pred hCCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc-HhccCccC-CCcHHHHHHHHHHHhCcC
Confidence 9999999999999999999999999999999999999999999999999999 89998774 455678999999999998
Q ss_pred CccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCCCCCCchhhHHHHHHH
Q 013614 291 FVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVC 370 (439)
Q Consensus 291 ~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP~K~NP~~~E~i~~~a 370 (439)
.++ +|+++||++++++++|+.++++|+|||+||++|+| +| ||+.+|. ++||||||||+||+.+|.+++++
T Consensus 223 ~~~-----~~~~~rD~~~e~~~~la~la~~l~kiA~Di~ll~s---~e-gev~~~~-~~GSS~MPhKrNPv~~E~i~~~a 292 (351)
T PRK05975 223 DAP-----QWHSQRDFIADFAHLLSLVTGSLGKFGQDIALMAQ---AG-DEISLSG-GGGSSAMPHKQNPVAAETLVTLA 292 (351)
T ss_pred CCc-----chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CC-CcccCCC-CCccCCCCCCcCcHHHHHHHHHH
Confidence 532 36899999999999999999999999999999996 68 9999997 69999999999999999999999
Q ss_pred HHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhccee
Q 013614 371 AQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQA 426 (439)
Q Consensus 371 ~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~v 426 (439)
+.+.+...++. .++..++|++...|..+|..+|+++.+.+++...+..+++||++
T Consensus 293 r~~~~~~~~~~-~~~~~~~er~~~~~~~e~~~lp~~~~~~~~~l~~~~~ll~~l~~ 347 (351)
T PRK05975 293 RFNATQVSGLH-QALVHEQERSGAAWTLEWMILPQMVAATGAALRLALELAGNIRR 347 (351)
T ss_pred HHHHHHHHHHH-hcccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHh
Confidence 98888876665 46788999999999999999999999999999999999999875
No 29
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=1.4e-66 Score=534.45 Aligned_cols=341 Identities=22% Similarity=0.260 Sum_probs=291.2
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCC
Q 013614 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGS 132 (439)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~ 132 (439)
+||...++++ | .+++++++|++||.|++.++.+.| ||++++++|.++|+...+.. ..+. ...
T Consensus 1 ~~~~~~~~~~--f--------s~~~~~~~~l~ve~A~a~~l~~~Glip~~~a~~I~~~l~~~~~~~--~~~~-----~~~ 63 (387)
T cd01360 1 RYGRPEMKKI--W--------SEENKFRKWLEVEAAVCEAWAKLGVIPAEAAEEIRKKAKFDVERV--KEIE-----AET 63 (387)
T ss_pred CCCchHHHHH--h--------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcCHHHH--HHHH-----HHh
Confidence 5888889998 6 378999999999999999999999 99999999999986432110 0010 011
Q ss_pred CcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 013614 133 GTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFK 212 (439)
Q Consensus 133 g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~ 212 (439)
+.++ + .++..+.+++| +.|+| +|+ |+||||+++|+++|++++.+ ..+.+.|..|+++|.++|++|+
T Consensus 64 ~~dv-~----~~e~~L~~~~g-~~~~~-lH~------G~S~nDi~~ta~~L~lr~~l-~~l~~~l~~l~~~L~~~A~~~~ 129 (387)
T cd01360 64 KHDV-I----AFVTAIAEYCG-EAGRY-IHF------GLTSSDVVDTALALQLREAL-DIILKDLKELLEVLKKKALEHK 129 (387)
T ss_pred CCCh-H----HHHHHHHHHHH-Hhhhh-eeC------CCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhC
Confidence 2221 2 25667888888 56777 885 99999999999999987664 7999999999999999999999
Q ss_pred CcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCCc
Q 013614 213 DIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFV 292 (439)
Q Consensus 213 ~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~ 292 (439)
+++||||||+|||||+|||||+++|+++|.|+++||.+++++++.+|||| |+||+.+.+ ..+.++++++|||+.+
T Consensus 130 ~t~m~grTH~Q~A~P~TfG~~l~~~~~~L~r~~~rL~~~~~~~~~~~lgg-a~Gt~~~~~----~~~~~~~a~~LG~~~~ 204 (387)
T cd01360 130 DTVMVGRTHGIHAEPTTFGLKFALWYAEFKRHLERLKEARERILVGKISG-AVGTYANLG----PEVEERVAEKLGLKPE 204 (387)
T ss_pred CCeeehhhcCCcceeehHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccch-HhhcCccCC----HHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999998 788877654 3456899999999985
Q ss_pred cCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHHHHHHH
Q 013614 293 TAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVC 370 (439)
Q Consensus 293 ~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~i~~~a 370 (439)
+..| ++++||+++|++++++.++++|+|||+||++|++ +|||||.+|. +++|||||||||||+.+|.++++|
T Consensus 205 ~~~~---~~~~rD~~~e~~~~la~~~~~L~ria~Dl~~~s~---~e~gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~~a 278 (387)
T cd01360 205 PIST---QVIQRDRHAEYLSTLALIASTLEKIATEIRHLQR---TEVLEVEEPFSKGQKGSSAMPHKRNPILSENICGLA 278 (387)
T ss_pred CCCC---cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccccceecCCCCCCCCcCCCCCCCCCHHHHHHHHHH
Confidence 5443 4799999999999999999999999999999995 6899999884 579999999999999999999999
Q ss_pred HHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 371 AQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 371 ~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
+.+.|+..++.. +...+++++...+...|+.++.+......+......++++|+||++||+++++.
T Consensus 279 ~~~~g~~~~~~~-~~~~~~~rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~ 344 (387)
T cd01360 279 RVIRSNVIPALE-NVALWHERDISHSSVERVILPDATILLDYILRRMTRVLENLVVYPENMRRNLNL 344 (387)
T ss_pred HHHHHHHHHHHh-hhHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHh
Confidence 999999875543 445567888877777788888777777777777788999999999999999975
No 30
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=2.1e-66 Score=539.14 Aligned_cols=345 Identities=20% Similarity=0.248 Sum_probs=293.4
Q ss_pred CccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccC
Q 013614 53 KLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 131 (439)
Q Consensus 53 ~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~ 131 (439)
.+||.+.++++ |+ +++.+++|++||.|++.|+.++| ||++.+++|.+++... .|++..+...
T Consensus 3 ~~y~~~~~~~i--~s--------~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~~~-------~~d~~~~~~~ 65 (435)
T PRK07492 3 PRYSRPEMVAI--WE--------PETKFRIWFEIEAHACEAQAELGVIPKEAAETIWEKGKDA-------EFDVARIDEI 65 (435)
T ss_pred cccCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCccc-------CCCHHHHHHH
Confidence 58999999999 73 78999999999999999999999 9999999998876320 0111111111
Q ss_pred CCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 013614 132 SGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEF 211 (439)
Q Consensus 132 ~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~ 211 (439)
.. .++.++-. +++.+.+.+| +.|+| ||+ |+||||+++|+++|++++. +..|.+.|..|+++|.++|++|
T Consensus 66 ~~-~~~h~v~a-~~~~L~~~~g-~~~~~-vH~------G~Ts~Di~dTa~~L~lr~~-~~~l~~~l~~l~~~L~~~A~~~ 134 (435)
T PRK07492 66 EA-VTKHDVIA-FLTHLAEFVG-PDARF-VHQ------GMTSSDVLDTCLNVQLVRA-ADLLLADLDRVLAALKKRAFEH 134 (435)
T ss_pred HH-HhCCChHH-HHHHHHHHhh-Hhhhh-hcC------CCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHc
Confidence 00 01112212 4567788888 45777 885 9999999999999999766 5799999999999999999999
Q ss_pred cCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCC
Q 013614 212 KDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPF 291 (439)
Q Consensus 212 ~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~ 291 (439)
++++||||||+|||+|+|||+||++|+++|.|+++||.+++++++.+|||| |+||+++++ +.+.+++++.|||+.
T Consensus 135 ~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgG-AvGT~~~~~----~~~~~~~a~~LGl~~ 209 (435)
T PRK07492 135 KDTPTIGRSHGIHAEPTTFGLKLARFYAEFARNRERLVAAREEIATCAISG-AVGTFANID----PRVEEHVAKKLGLKP 209 (435)
T ss_pred CCCEEeeccCCccceehhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcc-cccCCccCC----hHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999999999987 899988876 367789999999987
Q ss_pred ccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcC--CCCcccCCCCCCCCchhhHHHHHH
Q 013614 292 VTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMV 369 (439)
Q Consensus 292 ~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp--~~~~GSSiMP~K~NP~~~E~i~~~ 369 (439)
++.++ .+++||++++++++|+.++++|+|||+||++|+ ++||+|+.+| ++++|||+|||||||+.+|.++++
T Consensus 210 ~~~~~---~v~~RD~~~e~~~~la~~~~~L~ria~Di~~l~---~~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~i~~~ 283 (435)
T PRK07492 210 EPVST---QVIPRDRHAMFFATLGVIASSIERLAIEIRHLQ---RTEVLEAEEFFSPGQKGSSAMPHKRNPVLTENLTGL 283 (435)
T ss_pred CCccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchhccccCCCCCCCCCCCCCCCcHHHHHHHHH
Confidence 44432 268999999999999999999999999999999 5799999875 468999999999999999999999
Q ss_pred HHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 370 CAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 370 a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
++.+.|+..++.. ....++|++...|...|.+++.+..+.+.+......++++|+||++||++|++.
T Consensus 284 a~~~~~~~~~~~~-~~~~~~eRD~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~ 350 (435)
T PRK07492 284 ARLVRSYVVPAME-NVALWHERDISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPENMLKNLNK 350 (435)
T ss_pred HHHHHHHHHHHHH-hcchhhccCChHHHHhhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhh
Confidence 9999999665543 556788998888888899999998888877777788999999999999999985
No 31
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=1.9e-66 Score=547.72 Aligned_cols=332 Identities=17% Similarity=0.171 Sum_probs=282.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHh
Q 013614 74 RMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEIL 152 (439)
Q Consensus 74 ~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~l 152 (439)
..++.+++.|+++++|++.++.++| ||++++++|.++++++.+. ..+.|..+ ..++|++++ |+.++.+..
T Consensus 32 ~~~~~~~~~~l~ve~Aha~~l~~~GiIp~e~a~~I~~al~~~~~~-~~~~l~~~----~~~edv~~~----ie~~l~~~~ 102 (502)
T PRK06705 32 FQRNYLLKDMFQVHKAHIVMLTEENLMKKEEAKFILHALKKVEEI-PEEQLLYT----EQHEDLFFL----VEHLISQEA 102 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhhc-ccCccccC----CCCCchHHH----HHHHHHHhc
Confidence 3578999999999999999999999 9999999999999877331 12334322 245555555 777888888
Q ss_pred CcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhh
Q 013614 153 GHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQ 232 (439)
Q Consensus 153 g~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~ 232 (439)
|++.|+| +|+ |+||||+++|+++|++++.+ ..|.+.|..|+++|.++|++|++|+||||||+|+|||+||||
T Consensus 103 G~~~g~~-lH~------GrSrnD~v~Ta~~L~lr~~l-~~l~~~l~~l~~~l~~~A~~~~~t~m~g~TH~Q~AqP~T~G~ 174 (502)
T PRK06705 103 KSDFVSN-MHI------GRSRNDMGVTMYRMSLRRYV-LRLMEHHLLLQESILQLAADHKETIMPAYTHTQPAQPTTFGH 174 (502)
T ss_pred Cchhhcc-ccC------CCCHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCEEecccCCccceehHHHH
Confidence 7667888 996 89999999999999998775 699999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHH
Q 013614 233 EFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETS 311 (439)
Q Consensus 233 ~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~ 311 (439)
||++|+++|.|+++||.+++++++.+||||+|. ||+++. ..+++|++|||+. +..|++|++++||+++|++
T Consensus 175 ~l~~~~~~l~r~~~rL~~~~~r~~~~plGgaag~gt~~~~-------~r~~~a~~LGf~~-~~~ns~~a~~~rD~~~e~~ 246 (502)
T PRK06705 175 YTLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFPI-------KRERVADLLGFTN-VIENSYDAVAGADYLLEVS 246 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCCchhhhhccCCchH-------HHHHHHHHcCCCC-CcCCHHHHHhccHHHHHHH
Confidence 999999999999999999999999999999665 555443 3378999999998 6789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccc
Q 013614 312 GALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFE 390 (439)
Q Consensus 312 ~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e 390 (439)
+++++++++|+|||+||++|+| +|||+|++|+. .+|||||||||||+.+|.|+++|+++.|+.++++. .+.++++
T Consensus 247 ~~la~~~~~L~Ria~Dl~~~ss---~e~g~iel~e~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~l~-~~~~~~~ 322 (502)
T PRK06705 247 SLLMVMMTNTSRWIHDFLLLAT---KEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQ-MIHNTPF 322 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC---CCCCeeeecCCCCCccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH-HhcCCcc
Confidence 9999999999999999999997 47998888886 78999999999999999999999999999988875 5555555
Q ss_pred cccchhhHHHh----HHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 391 LNVFKPMIASG----LLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 391 ~n~~~~~~~~~----ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
++... ..|. ++..+....+++..+ ..++++|+||++||++|+..
T Consensus 323 ~~~~d--~q~~~~~~~~~~~~~~~~~l~~~-~~~l~~l~v~~~rm~~~~~~ 370 (502)
T PRK06705 323 GDIVD--TEDDLQPYLYKGIEKAIRVFCIM-NAVIRTMKVEEDTLKRRSYK 370 (502)
T ss_pred hhhhh--hHhhhhhHHHHHHHHHHHHHHHH-HHHHCcCEECHHHHHHHHhc
Confidence 43322 3343 455555555555666 46999999999999999865
No 32
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=3.4e-66 Score=539.18 Aligned_cols=340 Identities=20% Similarity=0.235 Sum_probs=293.0
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH-HHHcCccCCCCcccccccC
Q 013614 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ-EVAEGKLNDHFPLVVWQTG 131 (439)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~-ev~~~~~~~~f~~~~~~~~ 131 (439)
+|+.+.++.+ |+ +++++++|++||.|++.+++++| ||++++++|.++++ ++.. +......
T Consensus 4 ~y~~~~~~~i--~s--------~~~~~~~~l~ve~A~a~al~~~G~Ip~~~a~~I~~~~~~d~~~--------~~~~~~~ 65 (442)
T PRK08470 4 RYAREEMKKK--WT--------MQAKYDAWLEVEKAAVKAWNKLGLIPDSDCEKICKNAKFDIAR--------IDEIEKT 65 (442)
T ss_pred ccCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccchHH--------HHHHHHc
Confidence 7999999999 73 78999999999999999999999 99999999999873 1110 0011111
Q ss_pred CCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 013614 132 SGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEF 211 (439)
Q Consensus 132 ~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~ 211 (439)
.+.+ +.. +...+.+.+| +.|+| ||+ |+||||+++|+++|++++.+ ..|.+.|..|+++|.++|++|
T Consensus 66 ~~~d----v~~-~v~~L~e~~g-~~~~~-vH~------G~TsnDi~dTa~~L~lr~~l-~~l~~~l~~l~~~L~~lA~~~ 131 (442)
T PRK08470 66 TKHD----LIA-FLTSVSESLG-EESRF-VHY------GMTSSDCIDTAVALQMRDSL-KLIIEDVKNLMEAIKKRALEH 131 (442)
T ss_pred cCCC----hHH-HHHHHHHHcc-ccccc-eec------CCChhchHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 2222 222 2355678887 45777 885 99999999999999997765 799999999999999999999
Q ss_pred cCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCC
Q 013614 212 KDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPF 291 (439)
Q Consensus 212 ~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~ 291 (439)
++|+||||||+|||+|||||||+++|+++|.|+++||.+++++++.+|||| |+||+.+.+ ..+.+++++.|||+.
T Consensus 132 ~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~lgG-AvGt~a~~~----~~v~~~~a~~LGl~~ 206 (442)
T PRK08470 132 KDTLMVGRSHGIHGEPITFGLVLAIWYDEIKRHLKALEHTMEVISVGKISG-AMGNFAHAP----LELEELVCEELGLKP 206 (442)
T ss_pred CCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc-hhcccccCC----hHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999977 999986654 456789999999997
Q ss_pred ccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcC--CCCcccCCCCCCCCchhhHHHHHH
Q 013614 292 VTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMV 369 (439)
Q Consensus 292 ~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp--~~~~GSSiMP~K~NP~~~E~i~~~ 369 (439)
++.+|+ +++||+++|++++|+.++++|+|||+||++|+ ++||+|+.+| ++++|||||||||||+.+|.++++
T Consensus 207 ~~~~~~---v~~RD~~~e~~~~La~~a~~L~ria~Di~~l~---~~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~~~ 280 (442)
T PRK08470 207 APVSNQ---VIQRDRYARLASALALLASSCEKIAVAIRHLQ---RTEVYEAEEYFSKGQKGSSAMPHKRNPVLSENITGL 280 (442)
T ss_pred CCCCCC---ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccceecccCCCCCCCcCCCCCCcCcHHHHHHHHH
Confidence 777773 68999999999999999999999999999999 4799999876 468999999999999999999999
Q ss_pred HHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 370 CAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 370 a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
|+.+.|....+.. ....++|++...|...|..++.+..+.+.+......++++|+||++||++|++.
T Consensus 281 a~~~~~~~~~~~~-~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~nl~~ 347 (442)
T PRK08470 281 CRVIRSFATPALE-NVALWHERDISHSSVERFILPDAFITTDFMLHRLNNVIENLVVYPENMMKNLNL 347 (442)
T ss_pred HHHHHHHHHHHHH-hchHhhccCCchhHHHhhhHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHh
Confidence 9999999755544 557779999888888898888888888877777788999999999999999975
No 33
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=4.1e-66 Score=540.40 Aligned_cols=354 Identities=22% Similarity=0.248 Sum_probs=300.9
Q ss_pred ccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcc
Q 013614 47 ILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPL 125 (439)
Q Consensus 47 ~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~ 125 (439)
+..|-+.+||...++.+ |+ +++++++|++|+.|++.++.++| ||++++++|.+++.+...... . +
T Consensus 2 ~~~~~~~~y~~~~~~~i--~s--------~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~~~~d~~-~---~ 67 (451)
T PRK06390 2 VVSPIEYRYGRDQVKYI--FD--------DENRLRYMLKVEAAIAKAEYEYGIIPRDAFLDIKNAVDSNSVRLE-R---V 67 (451)
T ss_pred CCCCcCcccCCHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHH-H---H
Confidence 35688889999999999 73 78999999999999999999999 999999999998865311100 0 0
Q ss_pred cccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 126 VVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLH 205 (439)
Q Consensus 126 ~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~ 205 (439)
.......+.++ + .+++.+.+.+| +.|+| +|+ |+||||+++|+++|++++.+ ..|.+.|..|+++|.
T Consensus 68 ~~~~~~~~~dv-~----~~~~~L~~~~g-~~~~~-iH~------G~SsnDi~~Ta~~L~lr~~l-~~l~~~l~~l~~~L~ 133 (451)
T PRK06390 68 REIESEIKHDV-M----ALVEALSEQCS-AGKNY-VHF------GVTSNDINDTATALQIHDFV-SIIKDDIKNLMETLI 133 (451)
T ss_pred HHHHHHhCCCc-H----HHHHHHHHHhh-hhhhh-eec------CccHhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 00111123333 2 36678888897 67888 886 99999999999999997764 799999999999999
Q ss_pred HHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHH
Q 013614 206 SKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAE 285 (439)
Q Consensus 206 ~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~ 285 (439)
++|++|++|+||||||+|||||+||||||++|+++|.|+++||.+++++++.+++|| |+||+...... ...+.+++++
T Consensus 134 ~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~r~~~~~~~g-avGt~a~~g~~-~~~~~~~~a~ 211 (451)
T PRK06390 134 KLIDEYKDSPMMGRTHGQHASPITFGLKFAVYLDEMSRHLDRLTEMGDRAFAGKVLG-PVGTGAALGKD-ALDIQNRVME 211 (451)
T ss_pred HHHHHhCCCchhhhhCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC-hhcChhhCCCc-HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 99998877654 4678899999
Q ss_pred HcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEE--c-CCCCcccCCCCCCCCchh
Q 013614 286 ETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELI--L-PENEPGSSIMPGKVNPTQ 362 (439)
Q Consensus 286 ~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~--l-p~~~~GSSiMP~K~NP~~ 362 (439)
.|||+.+ |..+++++||++++++++++.++++|+|||+||++|+|+ |+||+. + |++++|||||||||||+.
T Consensus 212 ~LGl~~~---~~~~~~~~rD~~~e~~~~l~~la~~l~kia~Di~l~ss~---e~g~v~E~~~~~~~~GSSiMP~KrNPv~ 285 (451)
T PRK06390 212 ILGIYSE---IGSTQIVNRDRYIEYLSVINGISVTLEKIATEIRNLQRP---EIDEVSEYFDEESQVGSSSMPSKVNPIN 285 (451)
T ss_pred HcCCCCC---CCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccchhhcccccCCCCCccCCCCCCCcHH
Confidence 9999974 333467999999999999999999999999999999975 577774 3 447999999999999999
Q ss_pred hHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 363 CEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 363 ~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
+|.++++|..+.+... ........+++++...+...|+.++.+..+.+.+......|+++|+||++||++|++.
T Consensus 286 ~E~i~~~a~~~~~l~~-~~~~~~~~~~erd~~~~~~e~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~ 359 (451)
T PRK06390 286 SENVVSLSRFIRSLII-PEYEAGVTWHERDLTNSALERFTIPYASILIDYVLYNMNDVLSHLIIKEDEIRRNLES 359 (451)
T ss_pred HHHHHHHHHHHHHhHH-HHHHhhhHhhccCCcchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHhc
Confidence 9999999977766655 4444556668888888888888889988788888888888999999999999999986
No 34
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=2.4e-65 Score=574.04 Aligned_cols=353 Identities=18% Similarity=0.196 Sum_probs=306.6
Q ss_pred CccCh-HhHHHhhcCccCCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccc
Q 013614 53 KLWGA-QTQRSLQNFDIGGE-RERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQ 129 (439)
Q Consensus 53 ~~~g~-~t~rai~~f~~~~~-~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~ 129 (439)
.+|+. ++++++ | +++ ...-+++.+++|+.++.|++.++.++| ||++++++|.+++.++.+... ..|..++
T Consensus 413 ~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~Ah~~~l~~~gii~~~~a~~I~~~l~~~~~~~~-~~~~~~~-- 485 (887)
T PRK02186 413 ARPGLPPEAQAI--V--YGPGASEAPLAELDHLAAIDEAHLVMLGDTGIVAPERARPLLDAHRRLRDAGF-APLLARP-- 485 (887)
T ss_pred cccCCChhhhce--e--cCCCcchhhhhhhHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHhHH-hhCcCCC--
Confidence 46654 667777 4 333 334578999999999999999999999 999999999999987753222 2343332
Q ss_pred cCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 130 TGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSV 209 (439)
Q Consensus 130 ~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~ 209 (439)
..++.+++ +++++.+++|++.|+| +|+ |+||||+++|+++|++++.+ ..|.+.|..|+++|.++|+
T Consensus 486 --~~~~~~~~----~e~~L~~~~g~~~~~~-lH~------grSrnD~v~T~~~l~lr~~~-~~l~~~l~~l~~~L~~~A~ 551 (887)
T PRK02186 486 --APRGLYML----YEAYLIERLGEDVGGV-LQT------ARSRNDINATTTKLHLREAT-SRAFDALWRLRRALVFKAS 551 (887)
T ss_pred --CCcchHHH----HHHHHHHHhChhhhcc-cCc------cccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 24556665 7888999999667888 996 99999999999999998775 7999999999999999999
Q ss_pred HccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHHHcC
Q 013614 210 EFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETS 288 (439)
Q Consensus 210 ~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LG 288 (439)
+|++++||||||+|+|||+||||||++|+++|.|+++||.+++++++.+||||+|. ||+++.++ +++|++||
T Consensus 552 ~~~~~~m~g~TH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~r~~~~plG~aag~gt~~~~~~-------~~~a~~LG 624 (887)
T PRK02186 552 ANVDCALPIYSQYQPALPGSLGHYLLAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDP-------EFVARLLG 624 (887)
T ss_pred HcCCCEeecCccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999775 88887766 56999999
Q ss_pred CCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhHHHH
Q 013614 289 LPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALT 367 (439)
Q Consensus 289 l~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E~i~ 367 (439)
|+. +..|.+||+++||+++|++++++.++.+|+|||+||++|+| +||||+.+|+. ++|||||||||||+.+|.++
T Consensus 625 f~~-~~~n~~da~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~~---~e~g~i~~~~~~~~gSSiMPqKrNP~~~E~ir 700 (887)
T PRK02186 625 FEQ-PAPNSLDAVASRDGVLHFLSAMAAISTVLSRLAQDLQLWTT---REFALVSLPDALTGGSSMLPQKKNPFLLEFVK 700 (887)
T ss_pred CCC-CccCHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCcEECCCccccccCCCCCCCCCcHHHHHH
Confidence 996 78899999999999999999999999999999999999996 58999999985 79999999999999999999
Q ss_pred HHHHHHhhhhhHHHHhccccccccccchhhHH-HhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 368 MVCAQVIGNHVAITVGGSNGHFELNVFKPMIA-SGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 368 ~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~-~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
++|+++.|+..+++....+.+++++...+... ..+++++..+..++..+. .++++|+||++||+++++.+
T Consensus 701 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~v~~~rm~~~~~~~ 771 (887)
T PRK02186 701 GRAGVVAGALASASAALGKTPFSNSFEAGSPMNGPIAQACAAIEDAAAVLV-LLIDGLEADQARMRAHLEDG 771 (887)
T ss_pred HHHHHHhhHHHHHHHHHccCCcccccchhhhhHHHHHHHHHHHHHHHHHHH-HHHhhCEECHHHHHHHHhcC
Confidence 99999999999998778888999765544433 456777788877877775 69999999999999999764
No 35
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=4e-65 Score=529.02 Aligned_cols=341 Identities=19% Similarity=0.225 Sum_probs=290.6
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCC
Q 013614 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGS 132 (439)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~ 132 (439)
+||.+.++.+ |+ +++++++|++||.|++.+++++| ||++.+++|.++++ + ++..+....
T Consensus 4 ~y~~~~~~~~--fs--------~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~-~---------d~~~i~~~~ 63 (431)
T PRK07380 4 RYTLPEMGNI--WT--------DTAKFQTWLDVEIAVCEAQAELGKIPQEAVEEIKAKAN-F---------DPQRILEIE 63 (431)
T ss_pred ccCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccC-C---------CHHHHHHHH
Confidence 7999999999 73 78999999999999999999999 99999999987641 1 111111100
Q ss_pred CcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 013614 133 GTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFK 212 (439)
Q Consensus 133 g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~ 212 (439)
..++.++-.++ +.+.+.+| +.|+| ||+ |+|||||++|+++|++++. +..+.+.|..|+++|.++|++|+
T Consensus 64 -~~~~h~v~a~v-~~l~~~~g-~~~~~-vH~------G~Ts~Di~dTa~~L~lr~~-l~~l~~~l~~l~~~L~~lA~~~~ 132 (431)
T PRK07380 64 -AEVRHDVIAFL-TNVNEYVG-DAGRY-IHL------GMTSSDVLDTGLALQLVAS-LDLLLEELEDLIQAIRYQAREHR 132 (431)
T ss_pred -HHhCCChHHHH-HHHHHHHH-Hhhcc-ccC------CCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcC
Confidence 00111222222 34677787 67777 886 9999999999999999776 47999999999999999999999
Q ss_pred CcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCCc
Q 013614 213 DIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFV 292 (439)
Q Consensus 213 ~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~ 292 (439)
+|+||||||+|||+|||||+||++|+++|.|+++||..++++++.+|||| |+||++++++ ++.+.+++.|||+.+
T Consensus 133 ~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~l~G-AvGt~~~~~~----~~~~~~a~~LGl~~~ 207 (431)
T PRK07380 133 NTVMIGRSHGIHAEPITFGFKLAGWLAETLRNRERLVRLREDIAVGQISG-AVGTYANTDP----RVEAITCQKLGLKPD 207 (431)
T ss_pred CCeeechhcCccceechHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcch-hhcCcccCCh----hHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999965 8999888764 566789999999986
Q ss_pred cCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcC--CCCcccCCCCCCCCchhhHHHHHHH
Q 013614 293 TAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVC 370 (439)
Q Consensus 293 ~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp--~~~~GSSiMP~K~NP~~~E~i~~~a 370 (439)
+.+| ++++||++++++++|+.++++|+|||+||++|+ ++|++|+..| .+++|||||||||||+.+|.++++|
T Consensus 208 ~~~~---~v~~rd~~~e~~~~la~~a~~L~kia~Di~~l~---~~~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a 281 (431)
T PRK07380 208 TAST---QVISRDRHAEYVQTLALVGASLERFATEIRNLQ---RTDVLEVEEYFAKGQKGSSAMPHKRNPIRSERLSGLA 281 (431)
T ss_pred CCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCceeecccCCCCCCCCcCCCCCCCCHHHHHHHHHH
Confidence 5443 468999999999999999999999999999999 5789999765 4689999999999999999999999
Q ss_pred HHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 371 AQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 371 ~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
+.+.|+..++.. ....++|++...|...|..++.+..+...+......++++|+||++||++|++.
T Consensus 282 ~~~~g~~~~~~~-~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~ 347 (431)
T PRK07380 282 RVLRSYAVAALE-NVALWHERDISHSSVERVMLPDCSILLHFMLREMTDLVKNLLVYPENMRRNMNI 347 (431)
T ss_pred HHHHHHHHHHHH-hchhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHh
Confidence 999999887543 556788998887888899999998888877777788999999999999999974
No 36
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=1e-64 Score=527.51 Aligned_cols=348 Identities=17% Similarity=0.167 Sum_probs=299.1
Q ss_pred CccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHcCccCCCCccccccc
Q 013614 53 KLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG--LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQT 130 (439)
Q Consensus 53 ~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G--i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~ 130 (439)
-+|+.+.++.+ |+ +++.+++|++||.|++.+++++| ||++.+++|.+++.++ ++..+..
T Consensus 3 ~ry~~~~~~~~--fs--------~~~~~~~~l~~e~ala~a~~~~g~~ip~~~a~~i~~~~~~~---------d~~~i~~ 63 (436)
T cd03302 3 SRYASKEMVYI--FS--------PRKKFSTWRKLWLWLAEAEKELGLDISDEQIEEMKANVENI---------DFEIAAA 63 (436)
T ss_pred CCcCCHHHHHH--cC--------hHHHHHHHHHHHHHHHHhhHHhCCCCCHHHHHHHHHhhhcC---------CHHHHHH
Confidence 47888999999 73 78999999999999999999999 7999999998877211 1111110
Q ss_pred CCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 131 GSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVE 210 (439)
Q Consensus 131 ~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~ 210 (439)
.. ..++.++..++ ..+.+.+| +.|+| ||+ |+||||+++|++.|++++. +..|.+.|..|+++|.++|++
T Consensus 64 ~e-~~~~hdv~a~~-~~l~~~~~-~~~~~-vH~------G~TS~Di~dta~~L~lr~a-~~~l~~~L~~l~~~L~~~A~~ 132 (436)
T cd03302 64 EE-KKLRHDVMAHV-HAFGLLCP-AAAGI-IHL------GATSCFVTDNTDLIQIRDA-LDLILPKLAAVIDRLAEFALE 132 (436)
T ss_pred HH-HHhCcCchHHH-HHHHHHhH-hccCe-eee------CcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 00 01122233333 35677787 67778 886 9999999999999988665 589999999999999999999
Q ss_pred ccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCC------CCCcchHHHHHHHH
Q 013614 211 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLN------TKKGFDVKIASAVA 284 (439)
Q Consensus 211 ~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~------~~~~~~~~v~~~la 284 (439)
|++++||||||+|||+||||||||++|+++|.|+++||..++++++.+++|| ++||+.. .+++.+.++.++++
T Consensus 133 ~~dt~m~GrTH~Q~A~P~TfG~~~a~~~~~L~r~~~RL~~~~~~~~~~~~~G-avGt~a~~~~~~~~dr~~~~~v~~~~a 211 (436)
T cd03302 133 YKDLPTLGFTHYQPAQLTTVGKRACLWIQDLLMDLRNLERLRDDLRFRGVKG-TTGTQASFLDLFEGDHDKVEALDELVT 211 (436)
T ss_pred hCCCeeeccccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcC-hhhhhHHHHhcCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 7888632 22223467889999
Q ss_pred HHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcC--CCCcccCCCCCCCCchh
Q 013614 285 EETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQ 362 (439)
Q Consensus 285 ~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp--~~~~GSSiMP~K~NP~~ 362 (439)
+.|||..+ . |...++++||+++|++++|+.++++|+|||+||++|+| +||+.+| .+++|||||||||||+.
T Consensus 212 ~~LGl~~~-~-~~~~~v~~rD~~~e~~~~la~~a~~L~riA~Dl~l~~s-----~~el~e~~~~g~~GSS~MPhKrNPv~ 284 (436)
T cd03302 212 KKAGFKKV-Y-PVTGQTYSRKVDIDVLNALSSLGATAHKIATDIRLLAN-----LKEVEEPFEKGQIGSSAMPYKRNPMR 284 (436)
T ss_pred HHcCCCCC-C-CchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CceecccccCCCCCcccCCCccCcHH
Confidence 99999974 2 33335799999999999999999999999999999996 8999998 45899999999999999
Q ss_pred hHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 363 CEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 363 ~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
+|.++++|+++.|+..+++.....+++|+|...|...|+.++++..+.+.+..+...|+++|+||++||++|++.+
T Consensus 285 ~E~i~~~a~~~~g~~~~~~~~~~~~~~Erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~ 360 (436)
T cd03302 285 SERCCSLARHLMNLASNAAQTASTQWFERTLDDSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIRQE 360 (436)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhc
Confidence 9999999999999999998788999999999999999999999999999999999999999999999999999874
No 37
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-65 Score=495.03 Aligned_cols=353 Identities=22% Similarity=0.240 Sum_probs=314.1
Q ss_pred cCccCh----HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCccc
Q 013614 52 DKLWGA----QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLV 126 (439)
Q Consensus 52 ~~~~g~----~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~ 126 (439)
.++||+ .+...++.|+.|.+ .|..++.+-+.=-+|+|.++.+.| |+.++.+.|.+.+++|..++..+.|.+.
T Consensus 6 ~KlWGGRFtg~~dp~m~~fn~Si~---ydk~ly~~Dv~gSkaya~~L~~~glit~~e~dkil~gLe~i~~ew~~~kf~~~ 82 (464)
T KOG1316|consen 6 QKLWGGRFTGAVDPLMEKFNASIP---YDKRLYEADVDGSKAYAKALEKAGLITEAELDKILKGLEKIRREWAAGKFKLN 82 (464)
T ss_pred hhhhccccCCCCCHHHHHhhccCc---cchHHHHhhhhhhHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHhcCceEeC
Confidence 479986 67788999988865 466667666666899999999999 9999999999999999998888899887
Q ss_pred ccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 127 VWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHS 206 (439)
Q Consensus 127 ~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~ 206 (439)
+ +.||+|++ .|+++.|++| +.+++ +|+ ||||||++.|.+|||+++.+ +.++..+..|++++.+
T Consensus 83 p----~dEDvHta----nErrL~eliG-~~agK-lHT------gRSRNDQV~TDlRLw~r~~i-~~~~~~l~~L~~~~v~ 145 (464)
T KOG1316|consen 83 P----NDEDVHTA----NERRLTELIG-EIAGK-LHT------GRSRNDQVVTDLRLWLRDAI-DTILGLLWNLIRVLVD 145 (464)
T ss_pred C----CchhhhhH----HHHHHHHHHh-hhhhh-ccc------CccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 6 46777776 6789999999 67778 998 89999999999999998765 7999999999999999
Q ss_pred HHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHH
Q 013614 207 KSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAE 285 (439)
Q Consensus 207 ~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~ 285 (439)
+|+.+.+++||||||+|.|||+.|.||+.+++.+|.||..||.+++.|++++|||+||. |+++++|+. .+++
T Consensus 146 rAe~~~dvlmpGYTHLQRAQpvrwsH~LlSha~~l~~D~~Rl~q~~~R~n~~PLGagALAGnpl~iDR~-------~la~ 218 (464)
T KOG1316|consen 146 RAEAELDVLMPGYTHLQRAQPVRWSHWLLSHAEQLTRDLGRLVQIRKRLNQLPLGAGALAGNPLGIDRE-------FLAE 218 (464)
T ss_pred HHhhccCeeccChhhhhhccCchhHHHHHHHHHHHHhHHHHHHHHHHHhccCCcccchhcCCCCCccHH-------HHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 999999995 5999
Q ss_pred HcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhH
Q 013614 286 ETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCE 364 (439)
Q Consensus 286 ~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E 364 (439)
.|||+. +.-|+++|++.||+++|+..+.++++.+|+|+|+|+++|+| .|||++.+.+. .+|||+||||+||+.+|
T Consensus 219 ~LgF~~-v~~NSm~AvsDRDFVvef~fw~sm~m~HlSRlaEdlIiy~t---~EF~Fv~lSDaySTGSSlMPQKKNpDslE 294 (464)
T KOG1316|consen 219 ELGFEG-VIMNSMDAVSDRDFVVEFLFWASMVMTHLSRLAEDLIIYST---KEFGFVTLSDAYSTGSSLMPQKKNPDSLE 294 (464)
T ss_pred hcCCcc-cchhhhhccccchhHHHHHHHHHHHHHHHHHHhhHhheeec---cccCceeeccccccCcccCCCCCCCCHHH
Confidence 999998 78999999999999999999999999999999999999998 48999999986 89999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHh
Q 013614 365 ALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLH 436 (439)
Q Consensus 365 ~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~ 436 (439)
.+|+++++|.|..+++++.....+.-.|-..----..++++...+.+.+.+.+. ++++++||+|+|++.|-
T Consensus 295 LlRgksgrV~gdl~g~lmt~KG~PstYnkDlQeDKep~Fds~~tv~~~l~v~tg-v~stltvn~e~m~~aLt 365 (464)
T KOG1316|consen 295 LLRGKSGRVFGDLTGLLMTLKGLPSTYNKDLQEDKEPLFDSSKTVSDSLQVATG-VISTLTVNQENMEKALT 365 (464)
T ss_pred HhccccceehhhhHHHHHHhcCCccccccchhhhhhHHHhhHHHHHHHHHHHHH-HhhheeECHHHHhhccC
Confidence 999999999999999988654333322211000113478999999999999975 99999999999998763
No 38
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=8.6e-64 Score=511.59 Aligned_cols=344 Identities=26% Similarity=0.326 Sum_probs=304.1
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH-------HHHcCccCCCC
Q 013614 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ-------EVAEGKLNDHF 123 (439)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~-------ev~~~~~~~~f 123 (439)
+-.|+.+.++++ |+ +++.+++|++||.|++.|++++| ||++.++.|.+++. .|.+......+
T Consensus 2 ~~RY~~~em~~i--fS--------~~~~~~~~l~vE~ala~A~aelG~Ip~~a~~~I~~~~~~~~~d~~~i~eie~~t~H 71 (438)
T COG0015 2 DGRYSSPEMRAI--FS--------EEAKLRAWLKVEAALARAQAELGVIPAEAAAEIDAAAAFAEFDLERIKEIEAETGH 71 (438)
T ss_pred CcccCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhcccccCHHHHHHHHHHhCC
Confidence 357999999999 73 78999999999999999999999 99999999998863 23222111222
Q ss_pred cccccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 124 PLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNS 203 (439)
Q Consensus 124 ~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~a 203 (439)
+ |-. +...+.+.||++.++| || +|.|||||+||+..|.+++ +.+.|.+.|..+++.
T Consensus 72 d---------------V~a-~v~~l~e~~~~~~~~~-VH------~GaTS~DI~Dta~~L~lk~-a~~ii~~~l~~l~~~ 127 (438)
T COG0015 72 D---------------VKA-LVRALAEKVGEEASEY-VH------FGATSQDIIDTALALQLKE-ALDLILPDLKRLIEA 127 (438)
T ss_pred C---------------cHH-HHHHHHHhcCcccccc-ee------cccchHHHHhHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 2 222 2345678888666666 77 4999999999999988865 568999999999999
Q ss_pred HHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHH
Q 013614 204 LHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAV 283 (439)
Q Consensus 204 L~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~l 283 (439)
|.++|.+|+++||+||||+|||+|||||++|+.|+++|.|+++||.++.+++..+.+|| |+||..+.+ +.+..+++++
T Consensus 128 L~~~A~~~k~t~m~GRTHgq~A~PtT~G~k~A~w~~el~R~~~rL~~~~~~~~~g~i~G-a~Gt~Aa~~-~~~~~ve~~v 205 (438)
T COG0015 128 LAELALEHKDTPMLGRTHGQPAEPTTFGKKFANWLAELLRHLERLEEAEERIIVGKIGG-AVGTLAALG-DLGAEVEERV 205 (438)
T ss_pred HHHHHHHhCCCeecccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc-chhhHhhcC-chhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 999966654 4567899999
Q ss_pred HHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCch
Q 013614 284 AEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPT 361 (439)
Q Consensus 284 a~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~ 361 (439)
++.|||...+.++ |+.+||+++|+.++|+.++++|.|||.||++|+ ++|++|+.+|. +|+|||+|||||||+
T Consensus 206 ~e~LGL~~~p~st---q~~~RD~~ae~~~~La~i~~sl~k~a~dIr~l~---~~e~~Ev~E~f~~gq~GSSaMPHKrNPi 279 (438)
T COG0015 206 AEKLGLKPAPIST---QVSPRDRIAEFFSALALLAGSLEKFARDIRLLQ---RTEVGEVEEPFAKGQVGSSAMPHKRNPI 279 (438)
T ss_pred HHHcCCCCCCCCc---ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccccccccccCCCCCCCCCCCcccCcH
Confidence 9999999877776 589999999999999999999999999999999 68999999884 699999999999999
Q ss_pred hhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 362 QCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 362 ~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
.||.+.++++.+.++...+.... ..|+|++...|...|..+|..+.+.+.+.....+++++|+||+++|++||+..
T Consensus 280 ~~E~~~glar~~r~~~~~~~e~~-~~whERdlt~ssver~~Lp~~~~~~~~aL~~~~~vl~~L~v~~~~m~~nL~~~ 355 (438)
T COG0015 280 DSENVTGLARVARALVSTLLENL-VLWHERDLTDSSVERVILPDAFIAADGALNRLLNVLEGLEVNPERMRRNLDLT 355 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHhhc
Confidence 99999999999999988887655 88999999999999999999999999999988899999999999999999853
No 39
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=1.8e-63 Score=538.85 Aligned_cols=331 Identities=20% Similarity=0.262 Sum_probs=283.1
Q ss_pred CHHHHHHHHHHH-----HHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCc-cCCCCcccccccCCCcccccchhHHHHHHH
Q 013614 76 PEPIVRAFGILK-----KCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGK-LNDHFPLVVWQTGSGTQSNMNANEVIANRA 148 (439)
Q Consensus 76 ~~~~i~a~~~v~-----~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~-~~~~f~~~~~~~~~g~~~~~~~nevi~~~~ 148 (439)
+...++.++.++ .|++.++.+.| ||++++++|.++++++.... .+..+..+ ...+ ++|++|++++
T Consensus 21 ~~~~~~~~l~~e~i~~~~A~a~~l~~~Giip~~~a~~I~~~l~~~~~~~~~~~~~~~~----~~~e----d~h~~ie~~L 92 (614)
T PRK12308 21 DSLRFDYRLAEQDIVGSIAWSKALLSVGVLSEEEQQKLELALNELKLEVMEDPEQILL----SDAE----DIHSWVEQQL 92 (614)
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCC----Cccc----cHHHHHHHHH
Confidence 456788899999 99999999999 99999999999998874321 11122221 1223 4677789999
Q ss_pred HHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcceeccccccCCCCC
Q 013614 149 AEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPL 228 (439)
Q Consensus 149 ~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~ 228 (439)
.+++| +.|+| +|+ |+||||+++|+++|++++.+ ..|.+.|..|+++|.++|++|++++||||||+|||||+
T Consensus 93 ~~~~g-~~~~~-iH~------g~S~nD~~~Ta~~L~~r~~~-~~l~~~l~~l~~~l~~~a~~~~~t~m~grTH~Q~A~P~ 163 (614)
T PRK12308 93 IGKVG-DLGKK-LHT------GRSRNDQVATDLKLWCRQQG-QQLLLALDQLQQQMVNVAERHQGTVLPGYTHLQRAQPV 163 (614)
T ss_pred HHHhc-ccccc-eec------CCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCEeecCcCCcccEEe
Confidence 99998 67888 886 99999999999999997764 79999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHH
Q 013614 229 TLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAF 307 (439)
Q Consensus 229 T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~ 307 (439)
||||||++|+++|.|+++||..++++++.+||||||+ ||+++.++ +++++.|||.. +..|.+||+++||++
T Consensus 164 T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgga~agt~~~~~r-------~~~a~~LG~~~-~~~n~~da~~~rd~~ 235 (614)
T PRK12308 164 TFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGSGALAGTAYPIDR-------EALAHNLGFRR-ATRNSLDSVSDRDHV 235 (614)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhccccCCCCCCCH-------HHHHHHhCCCC-CcCCHHHHHcCcHHH
Confidence 9999999999999999999999999999999999998 89877765 57999999986 678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccc
Q 013614 308 VETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSN 386 (439)
Q Consensus 308 ~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~ 386 (439)
++++++|+.++++|+|||+||++|+|+ |+|++++|+. ++||||||||+||+.+|.++++|+++.|+.++++....+
T Consensus 236 ~e~~~~l~~~~~~l~ria~Dl~~~ss~---e~g~~el~~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~ 312 (614)
T PRK12308 236 MELMSVASISMLHLSRLAEDLIFYNSG---ESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGALAGMMMTVKA 312 (614)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC---CcCCEEeCccCCCccccCcCccCCcHHHHHHHHHHHHhhHHHHHHHHHcC
Confidence 999999999999999999999999973 7898888765 799999999999999999999999999999999854333
Q ss_pred c--ccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 387 G--HFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 387 ~--~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
. +++++...+ ...+++++..+..++. +...|++||+||++||++|+..
T Consensus 313 ~~~~~~rd~~~~--~~~l~~~~~~~~~~l~-~~~~~l~~l~v~~~rm~~~~~~ 362 (614)
T PRK12308 313 LPLAYNKDMQED--KEGLFDALDTWNDCME-MAALCFDGIKVNGERTLEAAKQ 362 (614)
T ss_pred Cchhhccchhhh--HHHHHHHHHHHHHHHH-HHHHHhCcCEECHHHHHHHHHc
Confidence 3 455554443 2335566666666666 5567999999999999999754
No 40
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=9.3e-65 Score=507.78 Aligned_cols=307 Identities=32% Similarity=0.435 Sum_probs=262.2
Q ss_pred CCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHc-CccCCC
Q 013614 45 GPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAE-GKLNDH 122 (439)
Q Consensus 45 g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~-~~~~~~ 122 (439)
|.+++|.+.+|+..+.++..+|.+ ......++.|+++|+++.| ||++++++|.++|+++.. ....+.
T Consensus 1 Gr~~~~~~~~~~~~s~~~~~~~~l-----------~~~~~~~e~a~~~a~a~~g~i~~~~a~~I~~a~~~i~~~~~~~~~ 69 (312)
T PF00206_consen 1 GRYEVPTDEMYAIFSDRARFDFWL-----------AEYDIRVEAALAKALAEAGIIPKEAADAIVKALEEILEDGDLDDA 69 (312)
T ss_dssp EEEEEETTHHHHHHHHHHHHHHHH-----------HSHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHTCTHGH
T ss_pred CCcCCchHHHHHHHCHHHHhCCEe-----------eccHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhccccc
Confidence 678999999999999888855521 2223338999999999999 999999999999999987 455557
Q ss_pred CcccccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 123 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHN 202 (439)
Q Consensus 123 f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~ 202 (439)
|+++..+++.++++++++++++. |++| .. .+++.|||+|+||||+++|+++|++++.+...|.+.|..|++
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~----e~~~----~~-~~~~~~vH~G~Ts~Di~~Ta~~l~lr~~~~~~l~~~l~~l~~ 140 (312)
T PF00206_consen 70 FELDEIEEDIGHAVEANLNEVLG----ELLG----EP-PEAGGWVHYGRTSNDIVDTALRLQLRDALLELLLERLKALID 140 (312)
T ss_dssp HHHCSCSSSHHHHHHHHHHHHHH----HHHT----HS-SGGGGGTTTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhccchhHHHHHHHHHhh----hhhh----cc-ccccccccCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 88888877777666666655553 4454 12 566777778999999999999999987764679999999999
Q ss_pred HHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHH
Q 013614 203 SLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIAS 281 (439)
Q Consensus 203 aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~ 281 (439)
+|.++|++|++|+||||||+|||+|+|||+||++|+++|.|+++||++++++++.+||||++. ||+++.+++|...+.+
T Consensus 141 ~L~~~a~~~~~t~~~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~gt~~~~~~~~~~~~~~ 220 (312)
T PF00206_consen 141 ALAELAEEHKDTPMPGRTHGQPAQPTTFGHKLAAWADELARDLERLEEARKRLNVSPLGGAVGAGTSLGIDREFQERVAE 220 (312)
T ss_dssp HHHHHHHHTTTSEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEETTTTTTTSSHTTSHHHHHHHHHH
T ss_pred HHHHHHHhhcCceeccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHhHHHHHhccCCCccccccccCcchhhhHHh
Confidence 999999999999999999999999999999999999999999999999999999999999544 7777777766667777
Q ss_pred HHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCC
Q 013614 282 AVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVN 359 (439)
Q Consensus 282 ~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~N 359 (439)
.|++.+|++ .+..|.++++++||++++++++|+.++++|+|||+||++|+|+ |+||+++|. +++|||+||||||
T Consensus 221 ~L~~~~~l~-~~~~~~~~~~~~rd~~~e~~~~l~~l~~~l~kia~Dl~~~~s~---e~g~~~~~~~~~~~GSS~MP~K~N 296 (312)
T PF00206_consen 221 ELGEFTGLG-VPAPNWHDAVSSRDRLAELASALALLAGTLSKIAEDLRLLSST---EIGEVEEPFPEGQVGSSIMPHKRN 296 (312)
T ss_dssp HHHHHHCST-EECSSHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTST---TTSSEEEEGGGSSSCSSSSTTCEE
T ss_pred hhhhhhhcc-cchhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---ceeeeecccccccCCCccCCCCCC
Confidence 777777777 4788999999999999999999999999999999999999975 588888774 5779999999999
Q ss_pred chhhHHHHHHHHHHhh
Q 013614 360 PTQCEALTMVCAQVIG 375 (439)
Q Consensus 360 P~~~E~i~~~a~~v~G 375 (439)
|+.+|.++++|++|+|
T Consensus 297 P~~~E~i~~~a~~v~G 312 (312)
T PF00206_consen 297 PVILENIRGLARQVIG 312 (312)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhhcCcC
Confidence 9999999999999987
No 41
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=4.1e-63 Score=509.28 Aligned_cols=342 Identities=14% Similarity=0.111 Sum_probs=286.9
Q ss_pred CccCh----HhH-HHhhcC-ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcc
Q 013614 53 KLWGA----QTQ-RSLQNF-DIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPL 125 (439)
Q Consensus 53 ~~~g~----~t~-rai~~f-~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~ 125 (439)
++||+ .+. ..++.| ..| ..+|..++..-..+..|++.++.+.| ||+++++.|.++++++.+ +.|++
T Consensus 2 klw~gr~~~~~~~~~~~~~~~~s---~~~D~~l~~~di~~~~AH~~mL~~~gii~~~e~~~i~~~L~~i~~----~~~~~ 74 (434)
T PRK06389 2 KIWSGGAGEELENDFYDNIVKDD---IDADKNLIKYEIINLLAYHVALAQRRLITEKAPKCVINALIDIYK----NGIEI 74 (434)
T ss_pred CCcccccCCCCchHHHHHHHCCC---HHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHc----CCCcC
Confidence 36765 233 456667 322 24577888888889999999999999 999999999999999976 34666
Q ss_pred cccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 126 VVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLH 205 (439)
Q Consensus 126 ~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~ 205 (439)
++ ..||+|++ ||+++++++| +.|+| +|+ ||||||++.|++||++++++ ..+...+..|+++|.
T Consensus 75 ~~----~~EDvh~~----iE~~L~~~~G-~~gg~-lht------gRSRNDqvat~~RL~~r~~~-~~~~~~l~~l~~~l~ 137 (434)
T PRK06389 75 DL----DLEDVHTA----IENFVIRRCG-DMFKN-FRL------FLSRNEQVHADLNLFIIDKI-IEIEKILYEIIKVIP 137 (434)
T ss_pred CC----CCCchHHH----HHHHHHHHhc-hhhhh-hcc------cCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 54 35676666 7899999999 68888 997 89999999999999998886 599999999999999
Q ss_pred HHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHH
Q 013614 206 SKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVA 284 (439)
Q Consensus 206 ~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la 284 (439)
++ |.|++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|||+|+. ||.++.++ +++|
T Consensus 138 ~~---~~dtimpGyTHlQ~AqP~TfG~~l~a~a~~L~rd~~RL~~~~~r~~~~pLGaga~~Gt~~~idr-------~~~A 207 (434)
T PRK06389 138 GF---NLKGRLPGYTHFRQAMPMTVNTYINYIKSILYHHINNLDSFLMDLREMPYGYGSGYGSPSSVKF-------NQMS 207 (434)
T ss_pred HH---ccCceeccccccCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCCchhhH-------HHHH
Confidence 64 9999999999999999999999999999999999999999999999999987776 89887754 6899
Q ss_pred HHcCCCCccCCchhhHhhcchH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC-CcccCCCCCCCCchh
Q 013614 285 EETSLPFVTAENKFEALAAHDA-FVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN-EPGSSIMPGKVNPTQ 362 (439)
Q Consensus 285 ~~LGl~~~~~~n~~da~~~rD~-~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~-~~GSSiMP~K~NP~~ 362 (439)
++|||+. +..|++++..++|+ +++++++++.++++|+|||+|+++|+|+ |++++|+. ++|||||||||||+.
T Consensus 208 ~lLGf~~-~~~n~~~a~~~~~~~~~e~~~~la~la~~LsRiA~Dl~l~ss~-----g~ielpd~~~~GSSiMPqKrNP~~ 281 (434)
T PRK06389 208 ELLGMEK-NIKNPVYSSSLYIKTIENISYLISSLAVDLSRICQDIIIYYEN-----GIITIPDEFTTGSSLMPNKRNPDY 281 (434)
T ss_pred HHhCCCC-CCCCCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----CEEEecCCCCCCCCCCCCCcCcHH
Confidence 9999998 67788877666655 8899999999999999999999999972 78889986 899999999999999
Q ss_pred hHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHh
Q 013614 363 CEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLH 436 (439)
Q Consensus 363 ~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~ 436 (439)
+|.++++|+++.|..+++.....+.++..+-..-.....+++.++.+.+++..+. .++++++||++| ++.+.
T Consensus 282 ~E~ir~~a~~v~g~~~~~~~~~~n~~~~y~~D~q~~~~~~~~~~~~~~~~l~l~~-~~i~~l~~~~~~-~~a~~ 353 (434)
T PRK06389 282 LELFQGIAAESISVLSFIAQSELNKTTGYHRDFQIVKDSTISFINNFERILLGLP-DLLYNIKFEITN-EKNIK 353 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCeECHHH-Hhhcc
Confidence 9999999999999998886543333322221111123467889999999999986 499999999999 55543
No 42
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=2.6e-60 Score=490.74 Aligned_cols=334 Identities=17% Similarity=0.132 Sum_probs=267.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcC-CCH------HHHHHHHHHHHHHHcCccCCCCcccccccCCCcccccchhHHHHHH
Q 013614 75 MPEPIVRAFGILKKCAAKVNMEYG-LDP------AIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANR 147 (439)
Q Consensus 75 ~~~~~i~a~~~v~~A~A~a~~~~G-i~~------~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~ 147 (439)
.+++++++|++||.|++.+++++| ||+ +.++.|.+++.... .|++..+.+... .+..++ ..+++.
T Consensus 6 s~~~~~~~~l~vE~ala~a~a~~g~Ip~~~~~~~~aa~~i~~~~~~~~------~~d~~~~~~~~~-~~~hdv-~al~~~ 77 (425)
T cd01598 6 SEYALIKYRVQVEVEWLIALSNLEEIPEVPPLTKEELKFLRAIIENFS------EEDALRIKEIEA-TTNHDV-KAVEYF 77 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHhhcC------ccCHHHHHHHHH-HHCCCc-HHHHHH
Confidence 378999999999999999999999 999 99999998875310 011111100000 001112 125677
Q ss_pred HHHHhCc-----ccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcceeccccc
Q 013614 148 AAEILGH-----KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHT 222 (439)
Q Consensus 148 ~~e~lg~-----~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~ 222 (439)
+.+.+|. +.++| ||+ |+||||+++|+++|++++.+...|.+.|..|+++|.++|++|++|+|+||||+
T Consensus 78 l~~~~g~~~~~~~~~~~-vH~------G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~m~GrTH~ 150 (425)
T cd01598 78 LKEKFETLGLLKKIKEF-IHF------ACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHG 150 (425)
T ss_pred HHHHhcccccchhhhhH-hcc------CCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCC
Confidence 8888873 34556 775 99999999999999998775456789999999999999999999999999999
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC----Ccc-hHHHHHHHHHHcCCCCccCCch
Q 013614 223 QDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK----KGF-DVKIASAVAEETSLPFVTAENK 297 (439)
Q Consensus 223 Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~----~~~-~~~v~~~la~~LGl~~~~~~n~ 297 (439)
|||+|+|||+||++|+++|.|+++||.++. ..+.+|| |+|| ++.. +++ ...+.+.+++.|||..++.+|+
T Consensus 151 Q~A~P~TfG~~~a~w~~~L~r~~~RL~~~~---~~g~~gG-avGt-~~~~~~~~~~~~~~~~~~~~a~~LgL~~~~~~~~ 225 (425)
T cd01598 151 QPATPTTLGKELAVFVYRLERQYKQLKQIE---ILGKFNG-AVGN-FNAHLVAYPDVDWRKFSEFFVTSLGLTWNPYTTQ 225 (425)
T ss_pred ccCeehhHHHHHHHHHHHHHHHHHHHHHHH---HhheeeC-chhh-hhhhhhccCcccHHHHHHHHHHHhCcCCCCcccc
Confidence 999999999999999999999999999983 4455776 8998 4433 333 3678999999999997655542
Q ss_pred hhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEc--CCCCcccCCCCCCCCchhhHHHHHHHHHHhh
Q 013614 298 FEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELIL--PENEPGSSIMPGKVNPTQCEALTMVCAQVIG 375 (439)
Q Consensus 298 ~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~l--p~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G 375 (439)
+++||+++|++++|+.++++|+|||+||++|+| + ||+.+ +++++|||||||||||+.+|.++++++.+.+
T Consensus 226 ---v~~rD~~~e~~~~La~la~~L~kia~Di~ll~s---~--ge~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~a~~ 297 (425)
T cd01598 226 ---IEPHDYIAELFDALARINTILIDLCRDIWGYIS---L--GYFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNA 297 (425)
T ss_pred ---hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---C--cceeecCCCCCCCcCCCCCCcCchHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999997 2 34443 4579999999999999999999999888877
Q ss_pred hhhHHHHhcc-ccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 376 NHVAITVGGS-NGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 376 ~~~~i~~~~~-~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
....+.. .. ..++|++...|...|.+ +.+..+...+......++++|+||++||++|++.+
T Consensus 298 ~~~~~~~-~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~al~~~~~ll~~L~v~~~rm~~nl~~~ 359 (425)
T cd01598 298 LLNHLSA-KLPISRLQRDLTDSTVLRNI-GVAFGHSLIAYKSLLRGLDKLELNEARLLEDLDAN 359 (425)
T ss_pred HHHHHHh-hhhhhhhcccccchhhhccH-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhC
Confidence 7655554 44 56799998888888888 66655555555555679999999999999999764
No 43
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=2.1e-59 Score=488.09 Aligned_cols=350 Identities=16% Similarity=0.147 Sum_probs=279.2
Q ss_pred ccccCccCh--HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-C---CH---HHHHHHHHHHHHHHcCcc
Q 013614 49 VPSDKLWGA--QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-L---DP---AIGKAIMQAAQEVAEGKL 119 (439)
Q Consensus 49 ~p~~~~~g~--~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i---~~---~~a~~I~~a~~ev~~~~~ 119 (439)
-|-+.+|+. +.++++ |+ +++++++|++||.|++.++++.| | |+ +.++.|.+++.++..+
T Consensus 13 ~pl~~ry~~~~~e~~~i--fS--------d~a~~~~~l~vE~ala~a~a~~g~i~~~P~i~~~aa~~i~~~~~~~~~~-- 80 (458)
T PLN02848 13 SPLDGRYWSKVKDLRPI--FS--------EFGLIRYRVLVEVKWLLKLSQIPEVTEVPPFSDEANSFLEGIIAGFSVD-- 80 (458)
T ss_pred CCchhhhcCCcHHHHHH--cC--------HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCHh--
Confidence 466778888 788888 73 78999999999999999999999 9 88 9999998887322000
Q ss_pred CCCCcccccccCCCcccccchhHHHHHHHHHHhCc--c---cCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHH-H
Q 013614 120 NDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGH--K---RGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR-L 193 (439)
Q Consensus 120 ~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~--~---~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~-l 193 (439)
++..+.+.. ..++.++-. ++..+.++++. + .++| || +|+|||||++|+++|++++.+ .. |
T Consensus 81 ----d~~~~~~~e-~~t~hdv~a-~~~~l~~~~~~~~~~~~~~~~-vH------~G~TsqDi~dTa~~L~lr~a~-~~~l 146 (458)
T PLN02848 81 ----DALEVKKIE-RVTNHDVKA-VEYFLKQKCKSHPELAKVLEF-FH------FACTSEDINNLSHALMLKEGV-NSVV 146 (458)
T ss_pred ----hHHHHHHHH-HHhCCCcHH-HHHHHHHHhccccchhhhhCc-cc------CCCCHHHHHHHHHHHHHHHHH-HHHH
Confidence 000000000 001122222 45677888862 2 3355 66 599999999999999997765 57 9
Q ss_pred HHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC-
Q 013614 194 IPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK- 272 (439)
Q Consensus 194 ~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~- 272 (439)
.+.|..|+++|.++|++|++++|+||||+|||+|||||+||++|++.|.|+++||.++. ..+.+|| |+||. +..
T Consensus 147 ~~~L~~l~~aL~~lA~~~~dt~m~GRTH~Q~A~PiTfG~~~a~w~~~L~r~~~rL~~~~---l~g~~~G-AvGt~-aa~~ 221 (458)
T PLN02848 147 LPTMDEIIKAISSLAHEFAYVPMLSRTHGQPASPTTLGKEMANFAYRLSRQRKQLSEVK---IKGKFAG-AVGNY-NAHM 221 (458)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHH---hccEeec-ccchh-hhhh
Confidence 99999999999999999999999999999999999999999999999999999998872 3355666 78874 433
Q ss_pred ---Ccch-HHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcC--C
Q 013614 273 ---KGFD-VKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--E 346 (439)
Q Consensus 273 ---~~~~-~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp--~ 346 (439)
++++ ..+++.+++.|||...+.. ..+++||+++|++++|+.++.+|+|||+||+.++ |+||+.++ +
T Consensus 222 ~~~~~~d~~~v~~~la~~LGL~~~~~~---~~v~~rD~~~e~~~~La~~a~~l~kia~Di~~~~-----e~ge~~e~~~~ 293 (458)
T PLN02848 222 SAYPEVDWPAVAEEFVTSLGLTFNPYV---TQIEPHDYMAELFNAVSRFNNILIDFDRDIWSYI-----SLGYFKQITKA 293 (458)
T ss_pred hccCCCCHHHHHHHHHHHhCCCCCCch---hhHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hcCCcccccCC
Confidence 5554 7899999999999852222 2369999999999999999999999999988777 46677654 3
Q ss_pred CCcccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhccee
Q 013614 347 NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQA 426 (439)
Q Consensus 347 ~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~v 426 (439)
+++|||||||||||+.+|.+++.++.+.|....++.....+++|++...|...|++ +.+..+...+......++++|+|
T Consensus 294 ~~~GSS~MP~KrNPv~~E~i~~~a~~~~~~~~~~~~~~~~~~~eRD~~~s~~e~~~-~~~~~~~~~al~~~~~~l~~L~v 372 (458)
T PLN02848 294 GEVGSSTMPHKVNPIDFENSEGNLGLANAELSHLSMKLPISRMQRDLTDSTVLRNM-GVGLGHSLLAYKSTLRGIGKLQV 372 (458)
T ss_pred CCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHhcCcchhhccccchhhhhccH-HHHHHHHHHHHHHHHHHHccCEE
Confidence 68999999999999999999999999999999988654777899999888888888 66666555555555679999999
Q ss_pred CHHHHHHHHhhc
Q 013614 427 NRERISKLLHEV 438 (439)
Q Consensus 427 n~erm~~~l~~~ 438 (439)
|++||++|++..
T Consensus 373 ~~~rm~~nl~~~ 384 (458)
T PLN02848 373 NEARLAEDLDQT 384 (458)
T ss_pred CHHHHHHHHHcc
Confidence 999999999764
No 44
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.4e-58 Score=482.46 Aligned_cols=351 Identities=18% Similarity=0.159 Sum_probs=273.8
Q ss_pred ccccCccCh--HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-C---CHHHHHH---HHHHHHHHHcCcc
Q 013614 49 VPSDKLWGA--QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-L---DPAIGKA---IMQAAQEVAEGKL 119 (439)
Q Consensus 49 ~p~~~~~g~--~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i---~~~~a~~---I~~a~~ev~~~~~ 119 (439)
-|-+.+|+. ..++.+ |+ +++++++|++||.|++.++++.| + |+..+++ |.+.+.++..
T Consensus 10 ~p~~~ry~~~~~e~~~~--~s--------~~~~~~~~l~vE~A~a~a~a~~g~~~~ip~~~~~~~~~i~~~~~~~~~--- 76 (456)
T PRK09285 10 SPLDGRYASKTAALRPI--FS--------EFGLIRYRVQVEVEWLIALAAHPGIPEVPPFSAEANAFLRAIVENFSE--- 76 (456)
T ss_pred CCCccccCCCCHHHHHH--hC--------HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCc---
Confidence 456668887 777887 63 68999999999999999999997 4 4444444 7776633210
Q ss_pred CCCCcccccccCCCccc-ccchhHHHHHHHHHHhCc-----ccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHH-
Q 013614 120 NDHFPLVVWQTGSGTQS-NMNANEVIANRAAEILGH-----KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR- 192 (439)
Q Consensus 120 ~~~f~~~~~~~~~g~~~-~~~~nevi~~~~~e~lg~-----~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~- 192 (439)
+.+.. +.+. ++. ..++ ..+++.+.+.+|. +.|+| ||+ |+||||+++|+++|++++.+ ..
T Consensus 77 -~d~~~--i~~~--e~~~~hdv-~a~~~~l~~~~~~~~~~~~~~~~-vH~------G~Ts~Di~dTa~~L~lr~~l-~~~ 142 (456)
T PRK09285 77 -EDAAR--IKEI--ERTTNHDV-KAVEYFLKEKLAGLPELEAVSEF-IHF------ACTSEDINNLSHALMLKEAR-EEV 142 (456)
T ss_pred -ccHHH--HHHH--HHHhCCCh-HHHHHHHHHHhcccCcchhHHhH-ccC------CCChhhHHHHHHHHHHHHHH-HHH
Confidence 01111 1100 000 1111 1256778888872 45666 775 99999999999999987764 66
Q ss_pred HHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCC-CCC
Q 013614 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG-LNT 271 (439)
Q Consensus 193 l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~-~~~ 271 (439)
|.+.|..|+++|.++|++|++++|+||||+|||+|||||+||++|+++|.|+++||.++ ...+++|| |+||. .+.
T Consensus 143 l~~~L~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~---~~~g~~~G-AvGt~~a~~ 218 (456)
T PRK09285 143 LLPALRELIDALKELAHEYADVPMLSRTHGQPATPTTLGKEMANVAYRLERQLKQLEAV---EILGKING-AVGNYNAHL 218 (456)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeeceecCCCCeeehHHHHHHHHHHHHHHHHHHHHHH---HHhhhccc-ccccHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999998 34556665 89983 221
Q ss_pred --CCcc-hHHHHHHHHHHcCCCCccCCchhhH-hhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCC
Q 013614 272 --KKGF-DVKIASAVAEETSLPFVTAENKFEA-LAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPEN 347 (439)
Q Consensus 272 --~~~~-~~~v~~~la~~LGl~~~~~~n~~da-~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~ 347 (439)
.++. +.++.+.+++.|||..++ ++| +++||++++++++|+.++++|+|||+||++|++ ..|++|. .+++
T Consensus 219 ~~~~~~~~~~v~~~~~~~LGL~~~~----~~~~v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~--~~e~~e~-~~~~ 291 (456)
T PRK09285 219 AAYPEVDWHAFSREFVESLGLTWNP----YTTQIEPHDYIAELFDAVARFNTILIDLDRDVWGYIS--LGYFKQK-TKAG 291 (456)
T ss_pred hhcCCccHHHHHHHHHHHhCCCCCC----CccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhhhcc-CCCC
Confidence 0222 356888899999998643 444 699999999999999999999999999999997 3345553 2457
Q ss_pred CcccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeC
Q 013614 348 EPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQAN 427 (439)
Q Consensus 348 ~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn 427 (439)
++|||||||||||+.+|.++++++.+.+....+.......++|++...|...|.+ +.+..+...+......++++|+||
T Consensus 292 ~~GSS~MPhKrNPv~~E~i~~~a~~~~~~~~~~~~~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~~l~~~~~~l~~L~V~ 370 (456)
T PRK09285 292 EIGSSTMPHKVNPIDFENSEGNLGLANALLEHLAAKLPISRWQRDLTDSTVLRNL-GVAFGYSLIAYDSLLKGLGKLEVN 370 (456)
T ss_pred CCCCCCCCCCcCchHHHHHHHHHHHHHHHHHHHHhhccHHhhCCcCchhhhhcch-HHHHHHHHHHHHHHHHHHccCEEC
Confidence 9999999999999999999999999998876666433256799998888888988 666666666666667899999999
Q ss_pred HHHHHHHHhhc
Q 013614 428 RERISKLLHEV 438 (439)
Q Consensus 428 ~erm~~~l~~~ 438 (439)
++||++|++.+
T Consensus 371 ~~rm~~nl~~~ 381 (456)
T PRK09285 371 EARLAEDLDAN 381 (456)
T ss_pred HHHHHHHHHhc
Confidence 99999999764
No 45
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=1.1e-35 Score=284.24 Aligned_cols=208 Identities=39% Similarity=0.440 Sum_probs=173.0
Q ss_pred HHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcceeccccccCCCC
Q 013614 148 AAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATP 227 (439)
Q Consensus 148 ~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P 227 (439)
+.+.+|.+.+++ |...|+|+|+||||+.+|++++++++.+ ..+.+.+..+..++..++++|++++||||||+|+|+|
T Consensus 20 L~~~~~~~~~~~--~~~~~~h~g~s~~d~~~t~~~~~~~~~l-~~l~~~l~~~~~~l~~~a~~~~~~~~~~~th~q~A~p 96 (231)
T cd01594 20 LAGRAGELAGGL--HGSALVHKGRSSNDIGTTALRLALRDAL-DDLLPLLKALIDALALKAEAHKGTVMPGRTHLQDAQP 96 (231)
T ss_pred HHHHHHHHhccc--cCCCCCCCCCCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCEeecccccccCcc
Confidence 344444333333 3334788899999999999999987764 7999999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHH
Q 013614 228 LTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAF 307 (439)
Q Consensus 228 ~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~ 307 (439)
+||||+|.+|.+.|.|+++||.++ ++
T Consensus 97 ~t~g~~~~~~~~~l~~~~~rL~~~------------------------------------------------------~~ 122 (231)
T cd01594 97 VTLGYELRAWAQVLGRDLERLEEA------------------------------------------------------AV 122 (231)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH------------------------------------------------------HH
Confidence 999999999999999999999998 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhcc
Q 013614 308 VETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGS 385 (439)
Q Consensus 308 ~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~ 385 (439)
+++++.|+.++.+|+|||+|+++|++.| ++++.+|+ .++|||+||||+||+.+|.+++++..+.|....+.....
T Consensus 123 ~~~~~~l~~~~~~l~r~a~d~~~~~~~~---~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~~~~~~~~~~~~~~~ 199 (231)
T cd01594 123 AEALDALALAAAHLSKIAEDLRLLLSGE---FGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTALK 199 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC---CCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 9999999999999999999999999865 67777776 489999999999999999999999999999988887665
Q ss_pred ccccccccchhhHHHhHHHHHHHHHHHHHH
Q 013614 386 NGHFELNVFKPMIASGLLHSLRLLGDASAS 415 (439)
Q Consensus 386 ~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~ 415 (439)
+++...+.........+.+.+..+.+.+..
T Consensus 200 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~ 229 (231)
T cd01594 200 GGPERDNEDSPSMREILADSLLLLIDALRL 229 (231)
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 554444444333444555555555555443
No 46
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=7.1e-36 Score=299.09 Aligned_cols=353 Identities=18% Similarity=0.174 Sum_probs=279.5
Q ss_pred ccccccCccCh-HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHcCccCCC
Q 013614 47 ILVPSDKLWGA-QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG---LDPAIGKAIMQAAQEVAEGKLNDH 122 (439)
Q Consensus 47 ~~~p~~~~~g~-~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G---i~~~~a~~I~~a~~ev~~~~~~~~ 122 (439)
+++|....|.. ..+..+ |+ ..+..+.|-+++--+|.|..++| |++++++++...++- . ...
T Consensus 6 ~~~pls~ry~~~~~l~~~--~s--------~~~~~~twr~lw~~lA~ae~~lgL~~itk~ai~e~~s~~~~-e----~~d 70 (481)
T KOG2700|consen 6 YKSPLSGRYASISELNPI--FS--------DRNKFSTWRRLWLWLAEAEKELGLTTITKEAIEEMKSSRDI-E----NID 70 (481)
T ss_pred CCCcccceeccccccchh--hh--------hhhhhhhhhHHHHhhhhhhhcCCcccchHHHHHHHHhhccc-c----ccc
Confidence 67888877854 334334 32 23445555555556666655554 899999988876541 1 111
Q ss_pred CcccccccCCCcccccchhHHH--HHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 123 FPLVVWQTGSGTQSNMNANEVI--ANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVL 200 (439)
Q Consensus 123 f~~~~~~~~~g~~~~~~~nevi--~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L 200 (439)
|+.-.-.++-. -++|. .+.+.+.|... .++ +|. |+|+.++.|.+.-+.++. ..+.+.+.|...
T Consensus 71 ~~~l~~ee~r~------~hdVmahvh~~~~~cp~a-agi-ihl------gatsc~vtdnadli~~rd-~~k~i~~~l~~v 135 (481)
T KOG2700|consen 71 FTALSPEEGRY------RHDVMAHVHSFGELCPIA-AGI-IHL------GATSCFVTDNADLIELRD-ASKLILPYLAGV 135 (481)
T ss_pred hhhcChhhhhh------cccHHHHHHHHHhhcchh-cce-EEe------eeeeeeecCCccceechh-HHHHHHHHHHHH
Confidence 22111111100 12222 23445666533 346 885 899999999998766654 568999999999
Q ss_pred HHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCc------
Q 013614 201 HNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG------ 274 (439)
Q Consensus 201 ~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~------ 274 (439)
++.|...+.+|+++++.||||+|+|+|+|||++..-|.++|.++++++..+.+++....++| |.||-.+...-
T Consensus 136 Idrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~~~~~qel~~~l~~f~~~~~~~~~~~~kg-a~gtqasf~~l~~~~~~ 214 (481)
T KOG2700|consen 136 IDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELLRDLERFHRARTDVRFRGLKG-ATGTQASFLSLFLGDMD 214 (481)
T ss_pred HHHHHHHHHHhccceecccccCccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccc-chhhHHHHHHhhcccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 88986433221
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccC
Q 013614 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSS 352 (439)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSS 352 (439)
.-++..+-+++.+||..+...+ ..+.+||...+....|+.++++..|+|.||++++. |+|+.+|. ++.|||
T Consensus 215 kv~~ld~Lv~k~~gf~~~~~~T--GQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~~-----~~ev~epFea~q~gsS 287 (481)
T KOG2700|consen 215 KVEKLDSLVTKELGFVPMYIVT--GQTYSRKTDAEEVAPLASLGATAHKYATDIRLLAK-----FAEVEEPFEAHQIGSS 287 (481)
T ss_pred HHHHHHHHHHHHhCCCcccccc--CCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhhccccccccccc
Confidence 1234556788999999766555 23678999999999999999999999999999994 99999995 599999
Q ss_pred CCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHH
Q 013614 353 IMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERIS 432 (439)
Q Consensus 353 iMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~ 432 (439)
.||+||||+.||.++++++.+..+.+.++..++-.|+|+....+.+.|.++|..++.+++.+....++.+|+.|.|++|+
T Consensus 288 aMp~krNpm~~E~itslar~l~~~v~~al~~~~~qw~Ertl~dSa~~rivlP~~Fl~ad~~L~~~~ni~~gl~v~p~~i~ 367 (481)
T KOG2700|consen 288 AMPYKRNPMRCERITSLARHLRPYVTQALNTASVQWHERTLDDSANRRIVLPDAFLTADGNLGTLLNILEGLVVYPKVIE 367 (481)
T ss_pred cCCCCCCCchhHHHhHHHHHHHHHHHHHhhhHHHHHhhcccccccccceechHHHHHHHHHHHHHHHHHhhcccccHHHH
Confidence 99999999999999999999999988887767788999988888888999999999999999977789999999999999
Q ss_pred HHHhh
Q 013614 433 KLLHE 437 (439)
Q Consensus 433 ~~l~~ 437 (439)
+++..
T Consensus 368 r~i~~ 372 (481)
T KOG2700|consen 368 RNIRD 372 (481)
T ss_pred HHHHh
Confidence 99864
No 47
>PRK08937 adenylosuccinate lyase; Provisional
Probab=99.90 E-value=2.3e-23 Score=198.21 Aligned_cols=120 Identities=26% Similarity=0.247 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccc
Q 013614 313 ALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFE 390 (439)
Q Consensus 313 ~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e 390 (439)
+++.++.+|+|||+||++|+| +||||+.+|. +++||||||||+||+.+|.+++.|.++.|+..++..+. .+++|
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s---~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~e 97 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQR---SEIREVEEPFAKGQKGSSAMPHKRNPIGSERITGLARVLRSYLVTALENV-PLWHE 97 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---cccceeecccccCCCCCccCCCccCcHHHHHHHHHHHHHHHHHHHHHHHh-HHHhc
Confidence 899999999999999999996 6899999994 58999999999999999999999999999999998755 78899
Q ss_pred cccchhhHHHhHHH-HHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 391 LNVFKPMIASGLLH-SLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 391 ~n~~~~~~~~~ll~-~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
+|...|...|..++ .+..+..++..+ .+|+++++||++||+++++.
T Consensus 98 rd~~~~~~~~~~l~~~~~~~~~~l~~~-~~~l~~l~v~~~rm~~~~~~ 144 (216)
T PRK08937 98 RDLSHSSAERIALPDAFLALDYILNRF-VNILENLVVFPENIERNLDK 144 (216)
T ss_pred cCCchhHHHhhHHHHHHHHHHHHHHHH-HHHHccCEECHHHHHHHHHH
Confidence 99999988885554 555555555555 58999999999999999985
No 48
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=92.37 E-value=4.8 Score=42.23 Aligned_cols=128 Identities=12% Similarity=0.020 Sum_probs=69.7
Q ss_pred HHHccCcceeccccccCCCCCchhhHHHHHHHHHH------HHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHH
Q 013614 208 SVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVK------YGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIAS 281 (439)
Q Consensus 208 A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~------r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~ 281 (439)
++++.=.++.-+| +|.+.|.+.+.+++..+.-.. -|++-|.+.. .+. -||-.+-.|++ ++
T Consensus 224 ~k~~gf~~~~~~T-GQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~~~~-ev~-epFea~q~gsS-aM---------- 289 (481)
T KOG2700|consen 224 TKELGFVPMYIVT-GQTYSRKTDAEEVAPLASLGATAHKYATDIRLLAKFA-EVE-EPFEAHQIGSS-AM---------- 289 (481)
T ss_pred HHHhCCCcccccc-CCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-ccccccccccc-cC----------
Confidence 3778889999999 999999999999876654332 2232222211 111 23333222321 11
Q ss_pred HHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCCCCCCch
Q 013614 282 AVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT 361 (439)
Q Consensus 282 ~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP~K~NP~ 361 (439)
+.+ .|++. -.+ +..++.++.-...+.--. +-+.--+...|+|.||+|+||+
T Consensus 290 --------p~k--rNpm~----~E~-------itslar~l~~~v~~al~~--------~~~qw~Ertl~dSa~~rivlP~ 340 (481)
T KOG2700|consen 290 --------PYK--RNPMR----CER-------ITSLARHLRPYVTQALNT--------ASVQWHERTLDDSANRRIVLPD 340 (481)
T ss_pred --------CCC--CCCch----hHH-------HhHHHHHHHHHHHHHhhh--------HHHHHhhcccccccccceechH
Confidence 111 23221 111 222333333333333221 1222235678999999999999
Q ss_pred hhHHHHHHHHHHhhhhh
Q 013614 362 QCEALTMVCAQVIGNHV 378 (439)
Q Consensus 362 ~~E~i~~~a~~v~G~~~ 378 (439)
.++...+.-.+......
T Consensus 341 ~Fl~ad~~L~~~~ni~~ 357 (481)
T KOG2700|consen 341 AFLTADGNLGTLLNILE 357 (481)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99998887665544433
No 49
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known.
Probab=64.01 E-value=28 Score=26.39 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 013614 78 PIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 115 (439)
Q Consensus 78 ~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~ 115 (439)
++...++.++++..--..+.| |+++.|+.|.+..++-.
T Consensus 11 ~l~~qm~e~kK~~idk~Ve~G~iTqeqAd~ik~~id~~~ 49 (59)
T PF10925_consen 11 ALYKQMLELKKQIIDKYVEAGVITQEQADAIKKHIDQRQ 49 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 567888899999999999999 99999999999988754
No 50
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=31.45 E-value=1.1e+02 Score=26.49 Aligned_cols=47 Identities=15% Similarity=0.117 Sum_probs=28.5
Q ss_pred ccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 390 ELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 390 e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
+++...+.+.+|+=-.+....-+..++. +-+..|+||+++|.+.|++
T Consensus 4 QRDLtDSTvlRNiGva~~~sliA~~s~l-kGl~Kl~vn~~~l~~dL~~ 50 (115)
T PF08328_consen 4 QRDLTDSTVLRNIGVAFGHSLIAYKSLL-KGLGKLEVNEERLAEDLDE 50 (115)
T ss_dssp TB-THHHHHHTTHHHHHHHHHHHHHHHH-HHHHTEEE-HHHHHHHHCT
T ss_pred cccchHHHHHHhhhHHHHHHHHHHHHHH-HHHhcccCCHHHHHHHHHH
Confidence 4444444444444444444444555554 4789999999999999875
No 51
>COG2346 Truncated hemoglobins [General function prediction only]
Probab=23.36 E-value=3.5e+02 Score=23.99 Aligned_cols=61 Identities=21% Similarity=0.255 Sum_probs=41.3
Q ss_pred CCCccccccCccChHhHHH-hhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 013614 44 FGPILVPSDKLWGAQTQRS-LQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVA 115 (439)
Q Consensus 44 ~g~~~~p~~~~~g~~t~ra-i~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~Gi~~~~a~~I~~a~~ev~ 115 (439)
+|....=.. .||.+.+|+ ..+|+| .+....+|+ ...+.+..+.|+|++....|.+.+..++
T Consensus 59 ~gGp~~y~e-~~ghp~lr~~h~~~~i-------t~~~~d~WL---~~~~~al~ei~~~~e~~~~i~~~~~~~A 120 (133)
T COG2346 59 WGGPPLYTE-RYGHPPLRARHLPFGI-------TPEEFDAWL---GLFADALDEIGLPEELREEILARAERIA 120 (133)
T ss_pred hcCCccccc-ccCCccHHHHccCCCC-------CHHHHHHHH---HHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 444433333 367777776 445644 456777777 4567778888999999999988887664
No 52
>PRK12683 transcriptional regulator CysB-like protein; Reviewed
Probab=22.74 E-value=3.9e+02 Score=26.19 Aligned_cols=46 Identities=7% Similarity=-0.021 Sum_probs=36.5
Q ss_pred cCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 013614 212 KDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQ 257 (439)
Q Consensus 212 ~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~ 257 (439)
-+....=||..+--.||..|+.|..++..+....+++......+..
T Consensus 44 lg~~Lf~R~~r~~~~lT~~G~~l~~~a~~il~~~~~~~~~~~~~~~ 89 (309)
T PRK12683 44 LGVEIFIRRGKRLTGLTEPGKELLQIVERMLLDAENLRRLAEQFAD 89 (309)
T ss_pred hCCeeEeeCCCCcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4556666886554579999999999999999999999877766543
No 53
>PF02022 Integrase_Zn: Integrase Zinc binding domain The structure of the N-terminal zinc binding domain.; InterPro: IPR003308 Retroviral integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains: an N-terminal zinc binding domain, a central catalytic core and a C-terminal DNA-binding domain [, ]. Often found as part of the POL polyprotein.; GO: 0008270 zinc ion binding; PDB: 1E0E_A 3F9K_F 1E27_C 1K6Y_B 1WJD_A 1WJB_A 1WJF_A 1WJE_B 3HPG_B 3HPH_C ....
Probab=22.71 E-value=80 Score=21.98 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=14.9
Q ss_pred HHHH-HcCCCHHHHHHHHHHHH
Q 013614 92 KVNM-EYGLDPAIGKAIMQAAQ 112 (439)
Q Consensus 92 ~a~~-~~Gi~~~~a~~I~~a~~ 112 (439)
+++. +.|||+.+|+.|++.|.
T Consensus 13 ~~L~~~f~ip~~vAk~IV~~C~ 34 (40)
T PF02022_consen 13 KALRHKFGIPRLVAKQIVNQCP 34 (40)
T ss_dssp HHHHHHHT--HHHHHHHHHHSC
T ss_pred HHHHHHHccCHHHHHHHHHHCH
Confidence 3444 77899999999999875
No 54
>CHL00180 rbcR LysR transcriptional regulator; Provisional
Probab=22.40 E-value=3.4e+02 Score=26.42 Aligned_cols=57 Identities=16% Similarity=0.215 Sum_probs=43.0
Q ss_pred ccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCC
Q 013614 211 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG 268 (439)
Q Consensus 211 ~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~ 268 (439)
.-++...=||. ..-.||..|..|..++..+.+.++++.+....+...+-|-=-+|+.
T Consensus 46 ~lg~~Lf~R~~-r~~~lT~~G~~l~~~a~~ll~~~~~~~~~~~~~~~~~~g~l~ig~~ 102 (305)
T CHL00180 46 QLNIPLFDRSK-NKASLTEAGELLLRYGNRILALCEETCRALEDLKNLQRGTLIIGAS 102 (305)
T ss_pred HhCCEEEEecC-CCceECHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCceEEEEEc
Confidence 34566666774 5689999999999999999999999998887776555443223553
Done!