Query 013614
Match_columns 439
No_of_seqs 255 out of 1828
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 13:52:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013614.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013614hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gtd_A Fumarase C, fumarate hy 100.0 1E-113 5E-118 896.4 41.2 404 33-438 21-426 (482)
2 3e04_A Fumarase, fumarate hydr 100.0 3E-113 1E-117 894.3 38.5 403 36-438 29-432 (490)
3 3ocf_A Fumarate lyase:delta cr 100.0 5E-111 2E-115 878.4 40.7 401 37-438 23-425 (478)
4 4hgv_A Fumarase C, fumarate hy 100.0 2E-109 5E-114 872.1 40.9 404 33-438 32-437 (495)
5 3r6q_A Aspartase; aspartate am 100.0 4E-109 1E-113 864.4 41.1 400 36-438 4-405 (468)
6 4adm_A Fumarase C, fumarate hy 100.0 1E-107 5E-112 855.7 40.3 397 34-438 29-427 (495)
7 1yfm_A Fumarase, YFUM; lyase, 100.0 4E-107 1E-111 852.6 40.8 402 36-438 27-430 (488)
8 1fur_A Fumarase C, FUMC; hydro 100.0 3E-105 9E-110 837.0 42.6 399 37-438 4-405 (467)
9 1jsw_A L-aspartase, L-aspartat 100.0 4E-104 1E-108 830.8 42.7 399 36-438 4-408 (478)
10 1vdk_A Fumarase C, fumarate hy 100.0 8E-104 3E-108 826.1 42.7 401 37-438 3-405 (466)
11 2e9f_A Argininosuccinate lyase 100.0 4.9E-77 1.7E-81 623.2 28.7 354 51-438 2-366 (462)
12 1k7w_A Delta 2 crystallin; eye 100.0 7.7E-77 2.6E-81 622.6 28.1 356 48-437 4-368 (468)
13 1re5_A 3-carboxy-CIS,CIS-mucon 100.0 5.9E-76 2E-80 613.9 29.3 353 50-438 5-362 (450)
14 1tj7_A Argininosuccinate lyase 100.0 3.6E-75 1.2E-79 608.3 31.4 353 53-438 2-363 (457)
15 3c8t_A Fumarate lyase; structu 100.0 1E-74 3.5E-79 604.4 34.4 349 50-438 7-360 (451)
16 1dof_A Adenylosuccinate lyase; 100.0 2E-74 6.9E-79 594.2 34.6 339 50-437 5-347 (403)
17 1q5n_A 3-carboxy-CIS,CIS-mucon 100.0 5.9E-75 2E-79 606.9 30.9 348 54-438 11-366 (454)
18 1c3c_A Protein (adenylosuccina 100.0 1.7E-74 5.9E-79 599.4 31.5 340 54-438 3-347 (429)
19 2pfm_A Adenylosuccinate lyase; 100.0 4.1E-74 1.4E-78 598.6 33.2 341 54-438 13-359 (444)
20 2fel_A 3-carboxy-CIS,CIS-mucon 100.0 1.2E-72 4.3E-77 572.4 25.7 342 53-434 13-355 (359)
21 2ptr_A Adenylosuccinate lyase; 100.0 3.9E-72 1.3E-76 586.3 24.1 356 52-438 13-381 (462)
22 4eei_A Adenylosuccinate lyase; 100.0 1.5E-69 5.2E-74 562.6 30.7 342 54-438 4-348 (438)
23 2j91_A Adenylosuccinate lyase; 100.0 3.1E-68 1.1E-72 561.4 29.6 360 40-437 28-397 (503)
24 1yis_A Adenylosuccinate lyase; 100.0 5.2E-68 1.8E-72 557.6 29.3 353 47-437 7-371 (478)
25 3bhg_A Adenylosuccinate lyase; 100.0 4.9E-62 1.7E-66 509.7 25.8 335 76-438 32-384 (459)
26 2qga_B Adenylosuccinate lyase; 100.0 1.9E-62 6.6E-67 513.5 21.6 337 76-438 28-381 (465)
27 3fxd_A Protein ICMQ; helix bun 22.6 1.4E+02 0.0047 21.5 4.6 18 99-116 5-22 (57)
No 1
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=100.00 E-value=1.3e-113 Score=896.40 Aligned_cols=404 Identities=61% Similarity=0.965 Sum_probs=392.2
Q ss_pred ccccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHH
Q 013614 33 YSTSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAA 111 (439)
Q Consensus 33 ~~~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~ 111 (439)
.|.++|+|+|++|+++||+|+|||+||+|+++||+|||. ++|+++|++|+.||+|+|.+|.++| ||++.+++|.++|
T Consensus 21 ~~~~~r~e~d~~g~~~vp~~~~~g~qt~Ra~~nf~i~~~--~~~~~~i~a~~~vk~AaA~an~~~G~l~~~~a~aI~~a~ 98 (482)
T 3gtd_A 21 SMKNYRIESDSFGEIQIEEKFYWGAQTQRSLNNFKISKQ--KMPKILIRALAILKKCAAQVNYEFGDLEYKIATSIDKAI 98 (482)
T ss_dssp ---CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCCSC--BCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred ccccCcCccccCCCccCCcccccCHHHHHHHHhccccCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 455689999999999999999999999999999999997 7999999999999999999999999 9999999999999
Q ss_pred HHHHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHH
Q 013614 112 QEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETN 190 (439)
Q Consensus 112 ~ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~ 190 (439)
++|.+|+++++||+++||+|+||++|||+||||+|+++|++|++.|+|. +|||||||+||||||++||+++|++++++.
T Consensus 99 ~ev~~g~~~~~fp~~~~q~gsGt~~Nmn~NevIa~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~~~ 178 (482)
T 3gtd_A 99 DRILAGEFEDNFPLVVWQTGSGTQTNMNMNEVIASIANEELTGKKGGKFPVHPNDHVNKGQSSNDSFPTAMHIATVLATK 178 (482)
T ss_dssp HHHHHTTTTTSCCCBSSSCTTCHHHHHHHHHHHHHHHHHHHHSCCCSSSSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcccCCCeehhccCCCccccchHHHHHHHHHHHHhCcccCCcCcCCccccCCCCCChhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998899875 899999999999999999999999988875
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCC
Q 013614 191 SRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLN 270 (439)
Q Consensus 191 ~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~ 270 (439)
+.|.+.|..|+++|.+||++|++++||||||+|||+|+||||||++|+++|.|+++||++++++++.+||||||+||+++
T Consensus 179 ~~L~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~P~TlG~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAvGT~~~ 258 (482)
T 3gtd_A 179 QQLIPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIEDALKKVYLLAQGGTAVGTGIN 258 (482)
T ss_dssp HTHHHHHHHHHHHHHHHHTTGGGCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHTTTTEECTTCTTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcEeeccccCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcc
Q 013614 271 TKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPG 350 (439)
Q Consensus 271 ~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~G 350 (439)
++++|+.++.+++++.|||++++.+|++|++++||+++|++++|+.++++|+|||+||++|+||||+|||||.+|++++|
T Consensus 259 ~~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~~~~G 338 (482)
T 3gtd_A 259 SKIGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKIANDIRLLGSGPRCGLGELHLPENEPG 338 (482)
T ss_dssp SCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSCC
T ss_pred CCchhHHHHHHHHHHHhCCCCccccchhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCeeEEECCCCCCC
Confidence 99999999999999999999878899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHH
Q 013614 351 SSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 430 (439)
Q Consensus 351 SSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~er 430 (439)
||||||||||+++|.++++|++|+|++++++++++.++||+|+++|++.|+++++++++.+++..++.+|++||+||++|
T Consensus 339 SSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~pl~~~~~l~s~~ll~~~~~~~~~~~v~gl~vn~er 418 (482)
T 3gtd_A 339 SSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIAR 418 (482)
T ss_dssp CSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEECHHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc
Q 013614 431 ISKLLHEV 438 (439)
Q Consensus 431 m~~~l~~~ 438 (439)
|+++++++
T Consensus 419 m~~~l~~s 426 (482)
T 3gtd_A 419 INTLRDKS 426 (482)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhh
Confidence 99999865
No 2
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.1e-113 Score=894.30 Aligned_cols=403 Identities=73% Similarity=1.120 Sum_probs=388.4
Q ss_pred cccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 013614 36 SFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVA 115 (439)
Q Consensus 36 ~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~Gi~~~~a~~I~~a~~ev~ 115 (439)
.+|+|+|++|+++||+++|||+||+|+++||+|||...++|+++|++++.||+|+|.+|.++|||++.+++|.++|++|.
T Consensus 29 ~~r~e~D~~G~~~vp~~~~~g~qt~ra~~nf~i~~~~~~~~~~~i~a~~~vkkAaA~an~~~Gl~~~~a~aI~~a~~ev~ 108 (490)
T 3e04_A 29 SFRIEYDTFGELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPKIANAIMKAADEVA 108 (490)
T ss_dssp CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCSCGGGBCCHHHHHHHHHHHHHHHHHGGGGTCCHHHHHHHHHHHHHHH
T ss_pred CCCcccccCcCccCcchhhhhHHHHHHHHcccccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999766899999999999999999999999999999999999999999
Q ss_pred cCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHHH
Q 013614 116 EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLI 194 (439)
Q Consensus 116 ~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~ 194 (439)
+|++.++||+++||+|+||++|||+||||||+++|++|++.|+|. ||||||||+||||||++||+++|++++++.+.|.
T Consensus 109 ~g~~~~~Fp~~~~q~Gsgt~~nmn~NEvia~ra~e~~G~~~g~~~~vHpndhVn~gqSsND~~~Ta~~l~~~~~~~~~L~ 188 (490)
T 3e04_A 109 EGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLL 188 (490)
T ss_dssp TTSCGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHTHH
T ss_pred cCCcccCCceeeecCCCCCcccccHHHHHHHHHHHHhCcccCCCCCCCcccccCCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998899885 7999999999999999999999999888766799
Q ss_pred HHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCc
Q 013614 195 PNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG 274 (439)
Q Consensus 195 ~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~ 274 (439)
+.|..|+++|.+||++|++++||||||+|||+|+||||||++|+++|.|+++||++++++++.+|||||||||+++++++
T Consensus 189 ~~L~~L~~aL~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~~a~~l~rd~~RL~~~~~~l~~~~lGgtAvGTg~~~~~~ 268 (490)
T 3e04_A 189 PGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIG 268 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTCTTTSEECTTCTTTSSCTTSCTT
T ss_pred HHHHHHHHHHHHHHHHhhCceeeccccCccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCcCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCC
Q 013614 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIM 354 (439)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiM 354 (439)
|+.++.+++++.|||++++.+|++|++++||+++|++++|+.++++|+|||+||++|+||||+|||||.+|++++|||||
T Consensus 269 ~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~ve~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~~~~GSSiM 348 (490)
T 3e04_A 269 FAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPENEPGSSIM 348 (490)
T ss_dssp HHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSCC----
T ss_pred HHHHHHHHHHHHhCCCCcCCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEECCCCCCCCCCC
Confidence 99999999999999998789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHH
Q 013614 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (439)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~ 434 (439)
||||||+++|.++++|++|+|+++++++++.+++||+|+++|++.+++|++++++.+++..++.+|++||+||++||+++
T Consensus 349 P~K~NPv~~E~i~~~a~~v~G~~~ai~~a~~~g~~eln~~~p~~~~~ll~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~ 428 (490)
T 3e04_A 349 PGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKL 428 (490)
T ss_dssp -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhc
Q 013614 435 LHEV 438 (439)
Q Consensus 435 l~~~ 438 (439)
++++
T Consensus 429 l~~s 432 (490)
T 3e04_A 429 MNES 432 (490)
T ss_dssp HHHC
T ss_pred Hhhc
Confidence 9865
No 3
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=100.00 E-value=5.4e-111 Score=878.40 Aligned_cols=401 Identities=41% Similarity=0.642 Sum_probs=378.7
Q ss_pred ccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 013614 37 FREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 115 (439)
Q Consensus 37 ~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~ 115 (439)
+|+|+|++|+++||.|+|||+||+|+++||+|||...+.++++|++|+.||+|+|.+|.++| ||++++++|.++|++|.
T Consensus 23 ~r~e~d~~g~~~vp~~~~yG~qt~Ra~~nf~i~~~~~~~~~~~i~a~~~vk~A~A~an~~~G~l~~~~a~aI~~a~~ei~ 102 (478)
T 3ocf_A 23 TRREQDSLGERDIPMDAYFGIQTLRAVENFSLSDVALNHIPALVRALAMVKKAAATANYKLRQLPEPKYAAIVAACDDII 102 (478)
T ss_dssp CEEEEETTEEEEECTTCSSCHHHHHHHHHCCCSSCBGGGSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred cccccccCCCccCCcccccCHHHHHHHHhccccCCCCCCcHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999997433358999999999999999999999 99999999999999999
Q ss_pred cCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHHH
Q 013614 116 EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLI 194 (439)
Q Consensus 116 ~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~ 194 (439)
++++.++||++++|+|+||++|||+||||++++.|++|++.|+|. ||||||||+||||||++||+++|++++.+ ..|.
T Consensus 103 ~g~~~~~f~~~~~q~g~gt~~nmnvnevia~~a~e~~G~~~G~~~~vHpndhVn~g~SsNDv~~Ta~~L~~~~~l-~~L~ 181 (478)
T 3ocf_A 103 DGLLMEQFVVDVFQGGAGTSSNMNANEVIANRALEHLGRPRGDYQTIHPNDDVNMSQSTNDVYPTAVRLALLLSQ-NQVQ 181 (478)
T ss_dssp TTTTGGGCCCBTTCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHHHTH-HHHH
T ss_pred cCccccCCCcchhhccCCccccchHHHHHHHHHHHHhchhcCCCCccCCCCCCCCCCChhhHHHHHHHHHHHHHH-HHHH
Confidence 999999999999999999999999999999999999998888875 99999999999999999999999998775 7999
Q ss_pred HHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCc
Q 013614 195 PNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG 274 (439)
Q Consensus 195 ~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~ 274 (439)
+.|..|+++|.+||++|++++||||||+|||+|+||||||++|+++|.|+++||++++++++.+||||||+|||++++++
T Consensus 182 ~~L~~L~~~L~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~~a~~l~rd~~RL~~~~~~l~~~~lGgtAvGTg~~~~~~ 261 (478)
T 3ocf_A 182 TALHRLIAAFEAKGREFATVIKIGRTQLQDAVPITLGQEFEAFAATLREDTARLEEVAALFREVNLGGTAIGTRINASHA 261 (478)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHGGGEECTTC-----------C
T ss_pred HHHHHHHHHHHHHHHHccCcEeecccccccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhHhCCCCeeeCCCcCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCC
Q 013614 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIM 354 (439)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiM 354 (439)
|...+.+++++.|||++.+.+|++|++++||++++++++|+.++++|+|||+||++|+||||+|||||.+|++++|||||
T Consensus 262 ~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~~q~GSSiM 341 (478)
T 3ocf_A 262 YAEQAIVELSQISGIELKATGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLSSGPRSGLGEIRLPAVQPGSSIM 341 (478)
T ss_dssp HHHHHHHHHHHHHTSCCEECSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCCEECCCCSCCBTTB
T ss_pred HHHHHHHHHHHhcCCCCccCCChhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeEEECCCCCCcCCCC
Confidence 99999999999999998789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHH
Q 013614 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (439)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~ 434 (439)
||||||+++|.++++|++|+|+++++++++.+++||+|+++|++.++++++++++.+++..|+.+|++||+||++||+++
T Consensus 342 P~K~NPv~~E~i~~~a~~V~G~~~~i~~a~~~g~leln~~~p~i~~~l~~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~ 421 (478)
T 3ocf_A 342 PGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQLNAFEPLIVYNILSSMRLLGRAMTNLAERCVDGIEANVERCRAG 421 (478)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred CcccCcHHHHHHHHHHHHHHhHHHHHHHHHhcCcchhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCEECHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhc
Q 013614 435 LHEV 438 (439)
Q Consensus 435 l~~~ 438 (439)
++++
T Consensus 422 l~~s 425 (478)
T 3ocf_A 422 AEES 425 (478)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 9875
No 4
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-109 Score=872.13 Aligned_cols=404 Identities=64% Similarity=0.980 Sum_probs=388.1
Q ss_pred ccccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHH
Q 013614 33 YSTSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAA 111 (439)
Q Consensus 33 ~~~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~ 111 (439)
.|+++|+|+|++|+++||.++|||+||+|+++||+||+. ++|+++|+||+.||+|+|.+|.++| ||++.+++|.+||
T Consensus 32 ~m~~~r~e~d~~g~~~vp~~~~~g~qt~ra~~nf~i~~~--~~~~~~i~a~~~vk~AaA~an~~lG~l~~~~a~aI~~A~ 109 (495)
T 4hgv_A 32 TMTSTRTETDTFGPIEVASDRYWGAQAQRSLGNFKIGWE--KQPLAIVRALGIVKQAAARANMALGRLDPAIGDAIVKAA 109 (495)
T ss_dssp ---CEEEEEETTEEEEEETTCCCCHHHHHHHHHCCCCSC--BCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred CCCCCeeeecCCCCccCCCccchHHHHHHHHHccCCCCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 456799999999999999999999999999999999987 8999999999999999999999999 9999999999999
Q ss_pred HHHHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHH
Q 013614 112 QEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETN 190 (439)
Q Consensus 112 ~ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~ 190 (439)
+||.+|+++++||+++||+|+||++|||+||||+|++.|++|++.|.|. +|||||||+||||||++|||++|++++++.
T Consensus 110 ~ei~~g~~~~~F~~d~~q~gsgt~~nmn~nevian~a~e~lg~~~g~~~~vhpnd~Vh~gqSsnDv~~TA~~l~~~~~~~ 189 (495)
T 4hgv_A 110 QEVIDGKLDEHFPLVVWQTGSGTQSNMNANEVVSNRAIELLGGVMGSKKPVHPNDHVNMSQSSNDTYPTAMHIACAERVI 189 (495)
T ss_dssp HHHHTTSSGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTTTCSCCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCchhhccchhhhhhccccccCcchhHHHHHHHHHHcCcccCCCCCCCHHHhccCCCChhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999888876 999999999999999999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCC
Q 013614 191 SRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLN 270 (439)
Q Consensus 191 ~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~ 270 (439)
+.|.+.|..|+++|.+||++|++++||||||+|||+|+||||||++|+++|.|+++||+++++++..+++||||+|||.+
T Consensus 190 ~~L~~~L~~L~~~L~~kA~~~~~~~~~GRTHlQ~A~P~TlG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGgtAvGtg~~ 269 (495)
T 4hgv_A 190 HDLLPALKHLHKALEEKVKAFDHIIKIGRTHTQDATPLTLGQEFSGYAAQVASSIKRIEMTLPGLCELAQGGTAVGTGLN 269 (495)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTHHHHTEECTTCTTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeeecccCCCCceeecHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhhccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcc
Q 013614 271 TKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPG 350 (439)
Q Consensus 271 ~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~G 350 (439)
.+++|+..+.+++++.+||++.+.+|+++|+++||++++++++|+.++++|+|||+|||+|+|+|++||+|+.+|++++|
T Consensus 270 ~~~~~~~~v~~~la~~~gl~f~~a~n~~~~~~~rD~~~e~~~~L~~la~~L~Kia~Dirll~S~~~~g~~Ei~~p~~q~G 349 (495)
T 4hgv_A 270 APVGFAEKVAEEIAAITGIGFTSAPNKFEALAAHDSMVFSHGAINATAAALFKIANDIRFLGSGPRSGLGELSLPENEPG 349 (495)
T ss_dssp SCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSCC
T ss_pred CchhHHHHHHHHHHHHhCCCccccCCHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEEecCcCCcc
Confidence 99999999999999999999989999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHH
Q 013614 351 SSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 430 (439)
Q Consensus 351 SSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~er 430 (439)
||||||||||+++|.++++|++|+|+++++.++...+++|+|.+.|.+.|+++++++++.+++..+..+|++||+||++|
T Consensus 350 SSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~~~~e~n~~~~~~~~~ll~s~~~l~~~~~~~~~~~i~gl~vn~er 429 (495)
T 4hgv_A 350 SSIMPGKVNPTQCEALTQVCVQVFGNHAALTFAGSQGHFELNVYNPLMAYNFLQSVQLLADAAISFTDNCVVGIEAREDN 429 (495)
T ss_dssp C-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHH
T ss_pred cccCccccChHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCEECHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc
Q 013614 431 ISKLLHEV 438 (439)
Q Consensus 431 m~~~l~~~ 438 (439)
|+++++++
T Consensus 430 m~~~l~~s 437 (495)
T 4hgv_A 430 IKAALDRS 437 (495)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 99999875
No 5
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=100.00 E-value=3.9e-109 Score=864.37 Aligned_cols=400 Identities=43% Similarity=0.699 Sum_probs=388.8
Q ss_pred cccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q 013614 36 SFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEV 114 (439)
Q Consensus 36 ~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev 114 (439)
.+|+|+|++|+++||.|+|||+||+|+++||+|||. ++|+++|++|+.||+|+|.+|.++| ||++++++|.++|++|
T Consensus 4 ~~r~e~d~~g~~~vp~~~~yg~qt~ra~~nf~i~~~--~~~~~~i~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a~~~i 81 (468)
T 3r6q_A 4 DVRIEKDFLGEKEIPKDAYYGVQTIRATENFPITGY--RIHPELIKSLGIVKKSAALANMEVGLLDKEVGQYIVKAADEV 81 (468)
T ss_dssp -CEEEEETTEEEEECTTCCCCHHHHHHHHHCCSSCC--CCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred CCCCccccCCCccCCcccccCHHHHHHHHccccCCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 379999999999999999999999999999999997 8999999999999999999999999 9999999999999999
Q ss_pred HcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHHH
Q 013614 115 AEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRL 193 (439)
Q Consensus 115 ~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l 193 (439)
.++++.++|+++++|+|+||++|||+||||++++.|++|++.|+|. +|||||||+||||||++||+++|++++.+ ..|
T Consensus 82 ~~~~~~~~f~~~~~~~g~gt~~nmnvnevia~~~~e~~G~~~g~y~~vHpndhVn~g~SsnDv~~Ta~~L~~r~~l-~~l 160 (468)
T 3r6q_A 82 IEGKWNDQFIVDPIQGGAGTSINMNANEVIANRALELMGEEKGNYSKISPNSHVNMSQSTNDAFPTATHIAVLSLL-NQL 160 (468)
T ss_dssp HTTTTGGGCCSCSSCSSTTHHHHHHHHHHHHHHHHHHTTCCTTCTTTSCCCCCCTTTCCHHHHHHHHHHHHHHHHH-HHH
T ss_pred HhCccccCCCccHHhccccccccccHHHHHHHHHHHHhccccCCcCccCCccCCCCCCChHhHHHHHHHHHHHHHH-HHH
Confidence 9998899999999999999999999999999999999998888864 99999999999999999999999998775 699
Q ss_pred HHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCC
Q 013614 194 IPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKK 273 (439)
Q Consensus 194 ~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~ 273 (439)
.+.|..|+++|.+||++|++++||||||+|||+|+||||||++|+++|.|+++||++++++++.+||||||+||++++++
T Consensus 161 ~~~L~~L~~~L~~~A~~~~~~v~~GrTHlQ~A~PiT~G~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAvGT~~~~~~ 240 (468)
T 3r6q_A 161 IETTKYMQQEFMKKADEFAGVIKMGRTHLQDAVPILLGQEFEAYARVIARDIERIANTRNNLYDINMGATAVGTGLNADP 240 (468)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTHHHHTEECTTCTTTSSCTTCCH
T ss_pred HHHHHHHHHHHHHHHHHccCcEEecCcCCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCeecCCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCC
Q 013614 274 GFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSI 353 (439)
Q Consensus 274 ~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSi 353 (439)
+|...+.+++++.|||++++.+|++||+++||++++++++|+.++++|+|||+||++|+||||+|||||.+|++++||||
T Consensus 241 ~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~Kia~DlrllsS~pr~g~gei~lp~~~~GSSi 320 (468)
T 3r6q_A 241 EYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSSALKVCMINMSKIANDLRLMASGPRAGLSEIVLPARQPGSSI 320 (468)
T ss_dssp HHHHHHHHHHHHHHCSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSCCCEECCCCSCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeEEECCCCCCCCCC
Confidence 99999999999999999878899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHH
Q 013614 354 MPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISK 433 (439)
Q Consensus 354 MP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~ 433 (439)
|||||||+++|.++++|++|+|+++++++++.+++||+|+++|++.+++++++.++.+++..|.++|++||+||++||++
T Consensus 321 MP~K~NP~~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~ 400 (468)
T 3r6q_A 321 MPGKVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELNVMEPVLFFNLIQSISIMTNVFKSFTENCLKGIKANEERMKE 400 (468)
T ss_dssp STTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999987899999999999999
Q ss_pred HHhhc
Q 013614 434 LLHEV 438 (439)
Q Consensus 434 ~l~~~ 438 (439)
+++.+
T Consensus 401 ~l~~s 405 (468)
T 3r6q_A 401 YVEKS 405 (468)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 99875
No 6
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=100.00 E-value=1.5e-107 Score=855.69 Aligned_cols=397 Identities=53% Similarity=0.847 Sum_probs=374.8
Q ss_pred cccccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH
Q 013614 34 STSFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ 112 (439)
Q Consensus 34 ~~~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ 112 (439)
+..+|+|+|++|+++||+++|||+||+|+++||++|++ ++|+++|++|+.||+|+|.+|.++| ||++++++|.++|+
T Consensus 29 ~~~~r~e~d~~g~~~vp~~~~~G~~t~r~~~~F~is~~--~~~~~~I~a~~~vk~A~A~a~~~~Gil~~~~a~aI~~a~~ 106 (495)
T 4adm_A 29 SANYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGR--GLERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAAAA 106 (495)
T ss_dssp --CEEEEEETTEEEEEETTCSCCHHHHHHHHHCCSSSC--BCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred hcccCCccCcCCCccCChhhhcCchhHHHHHhcCCCCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999997 7999999999999999999999999 99999999999999
Q ss_pred HHHcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHH
Q 013614 113 EVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR 192 (439)
Q Consensus 113 ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~ 192 (439)
+|.+++..++||++++|+|+||++|||+||||++++ ++| |+| +|||||||+||||||++||+++|++++++.+.
T Consensus 107 ei~~~~~~~~f~~~~~q~g~gt~~nmnvnevia~ra--~lG---G~~-vH~~dhVn~g~SsNDv~~Ta~~L~lr~~l~~~ 180 (495)
T 4adm_A 107 EIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIA--AKG---GVT-LHPNDDVNMSQSSNDTFPTATHIAATEAAVAH 180 (495)
T ss_dssp HHHTTSCGGGCCCBSSSCTTCHHHHHHHHHHHHHHH--HHT---TCC-CCTTTTTTTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCcccCCCCcchhhccccccccccHHHHHHHHH--HhC---CCc-cCcccccCCCCChhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999976 677 778 99999999999999999999999998776557
Q ss_pred HHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC
Q 013614 193 LIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK 272 (439)
Q Consensus 193 l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~ 272 (439)
|.+.|..|+++|.+||++|++++||||||+|||||+||||||++|+++|.|+++||++++++++.+||||||+||++|++
T Consensus 181 l~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~PiT~G~~~~~~a~~l~rd~~RL~~~~~~l~~~~LGgtAvGT~~~~~ 260 (495)
T 4adm_A 181 LIPALQQLHDALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAP 260 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTTSSCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHccCCeeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHcCC-CCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCccc
Q 013614 273 KGFDVKIASAVAEETSL-PFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGS 351 (439)
Q Consensus 273 ~~~~~~v~~~la~~LGl-~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GS 351 (439)
++|+..+.+++++.||| ++.+.+|++||+++||++++++++|+.++++|+|||+||++|+||||+|||||.+|+.++||
T Consensus 261 ~~~~~~v~~~la~~lG~~~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~e~gei~lp~~q~GS 340 (495)
T 4adm_A 261 DDFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPGS 340 (495)
T ss_dssp TTHHHHHHHHHHHHHCCTTCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSTTSCCCEECCCC----
T ss_pred hhHHHHHHHHHHHHhCCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEECCCCCCCC
Confidence 99999999999999999 77789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHH
Q 013614 352 SIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERI 431 (439)
Q Consensus 352 SiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm 431 (439)
|||||||||+++|.++++|++|+|+++++++++.+++||+|+++|++.++++++++++.+++..|+.+|++||+||++||
T Consensus 341 SiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm 420 (495)
T 4adm_A 341 SIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEHL 420 (495)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcChHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred HHHHhhc
Q 013614 432 SKLLHEV 438 (439)
Q Consensus 432 ~~~l~~~ 438 (439)
+++++.+
T Consensus 421 ~~~l~~s 427 (495)
T 4adm_A 421 RRLAESS 427 (495)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 9999875
No 7
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=100.00 E-value=3.8e-107 Score=852.64 Aligned_cols=402 Identities=70% Similarity=1.041 Sum_probs=383.0
Q ss_pred cccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q 013614 36 SFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEV 114 (439)
Q Consensus 36 ~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev 114 (439)
.+|+|+|+||+++||.++|||+||+|+++||++|+..+++|++++++|+.||+|+|.+|.++| ||++++++|.++|++|
T Consensus 27 ~~r~e~d~~g~~~vp~~~~~g~~t~r~~~~f~~s~~~~~~~~~~i~a~~~v~~A~A~a~~~~Gil~~~~a~aI~~a~~ei 106 (488)
T 1yfm_A 27 SFRTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEV 106 (488)
T ss_dssp CEEEECSSSCCEEEESSCCCCHHHHHHHTTCCTTGGGGBCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred ccCcccccCCCcCCCccchhchHHHHHHHhccCCCCcccCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999987457899999999999999999999999 9999999999999999
Q ss_pred HcCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccC-CcccccccccCCCCChhcHHHHHHHHHHHHHHHHHH
Q 013614 115 AEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRL 193 (439)
Q Consensus 115 ~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g-~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l 193 (439)
.+++..++|+++++|+|+|||+|||+||||++++.|++|++.| ++ ||||||||+||||||++||+++|++++.+.+.|
T Consensus 107 ~~~~~~~~f~~~~~q~g~~t~~nmn~~evia~~a~e~lG~~~g~~~-vHp~d~Vn~g~SsNDv~~Ta~~L~lr~~l~~~l 185 (488)
T 1yfm_A 107 ASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQ-VHPNNHCNQSQSSNDTFPTVMHIAASLQIQNEL 185 (488)
T ss_dssp HHTSSGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHC----------CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHTTH
T ss_pred HhcccccCCCcchhhccccccccccHHHHHHHHHHHHhCccccCCc-cCcccCcCCCCChhhHHHHHHHHHHHHHHHHHH
Confidence 9998889999999999999999999999999999999997788 77 999999999999999999999999987652389
Q ss_pred HHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCC
Q 013614 194 IPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKK 273 (439)
Q Consensus 194 ~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~ 273 (439)
.+.|..|+++|.+||++|++++||||||+|||+|+||||||++|+++|.|+++||++++++++.+||||||+||++++++
T Consensus 186 ~~~L~~L~~~L~~~A~e~~~~v~~GrTHlQ~A~PiT~G~~~~~~~~~l~rd~~RL~~~~~~l~~~~lGgtAvGT~~~~~~ 265 (488)
T 1yfm_A 186 IPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNTKP 265 (488)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTTSSCTTSCT
T ss_pred HHHHHHHHHHHHHHHHHhcCcEeeceecCccceEeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCC
Q 013614 274 GFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSI 353 (439)
Q Consensus 274 ~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSi 353 (439)
+|..++.+++++.|||++.+.+|++|++++||++++++++|+.++++|+|||+||++|+||||+|||||.+|++++||||
T Consensus 266 ~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsS~pr~g~gei~lp~~~~GSSi 345 (488)
T 1yfm_A 266 GFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPENEPGSSI 345 (488)
T ss_dssp THHHHHHHHHHHHHSSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCCSCCCTT
T ss_pred hHHHHHHHHHHHHhCCCCccCccHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCceeEECCCCCCcCCC
Confidence 99999999999999999878999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHH
Q 013614 354 MPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISK 433 (439)
Q Consensus 354 MP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~ 433 (439)
|||||||+++|.++++|++|+|++++++.++..+++|+|+++|++.+++++++.++.+++..|+.+|++||+||++||++
T Consensus 346 MP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~~~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~ 425 (488)
T 1yfm_A 346 MPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHE 425 (488)
T ss_dssp STTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBCSCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHH
T ss_pred cccccCcHHHHHHHHHHHHHHhHHHHHHHHHhcccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHhhc
Q 013614 434 LLHEV 438 (439)
Q Consensus 434 ~l~~~ 438 (439)
+++++
T Consensus 426 ~l~~s 430 (488)
T 1yfm_A 426 LLTKS 430 (488)
T ss_dssp HHHHC
T ss_pred HHccC
Confidence 99875
No 8
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=100.00 E-value=2.6e-105 Score=837.00 Aligned_cols=399 Identities=60% Similarity=0.950 Sum_probs=387.9
Q ss_pred ccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 013614 37 FREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 115 (439)
Q Consensus 37 ~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~ 115 (439)
+|+|+|++|+++||.++|||+||+|+++||++|+. ++|++++++|+.||+|+|.+|.++| ||++++++|.++|++|.
T Consensus 4 ~r~e~d~~g~~~vp~~~~~g~~t~r~~~~f~~s~~--~~~~~~i~a~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~ 81 (467)
T 1fur_A 4 VRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTE--KMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVL 81 (467)
T ss_dssp CEEEEETTEEEEECTTCCCCHHHHHHHHHCCCSSC--BCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred cCccccCCCCccCCcccccchhhHHHHHhccCCCc--cCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999986 6899999999999999999999999 99999999999999999
Q ss_pred cCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcc-cccccccCCCCChhcHHHHHHHHHHHHHHHHH-H
Q 013614 116 EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIAAAMETNSR-L 193 (439)
Q Consensus 116 ~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~-vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~-l 193 (439)
+++..++|+++++|+|+|||+|||+|+||++++.|++|++.|+|. +|||||||+||||||+++|+++|++++.+ .. |
T Consensus 82 ~~~~~~~f~~~~~q~g~~~~~~mn~~~via~~a~e~~G~~~g~~~~lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l-~~~l 160 (467)
T 1fur_A 82 AGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLAL-RKQL 160 (467)
T ss_dssp TTTTGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCSSTTCSSCCCCCCTTTCCHHHHHHHHHHHHHHHHH-HHTH
T ss_pred hccccccccchhhhccccccccccHHHHHHHHHHHHhCcccccccccCchhhcccCCChhhHHHHHHHHHHHHHH-HHHH
Confidence 998889999999999999999999999999999999998888765 99999999999999999999999998775 56 9
Q ss_pred HHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCC
Q 013614 194 IPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKK 273 (439)
Q Consensus 194 ~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~ 273 (439)
.+.|..|+++|.+||++|++++||||||+|||||+||||||++|+++|.|+++||++++++++.+||||||+||++++++
T Consensus 161 ~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGgtAvGT~~~~~~ 240 (467)
T 1fur_A 161 IPQLKTLTQTLNEKSRAFADIVKIGRTNLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHP 240 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTEECTTCTTTSSCTTSCT
T ss_pred HHHHHHHHHHHHHHHHHhcCcEeeccccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCcchhcCCccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCC
Q 013614 274 GFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSI 353 (439)
Q Consensus 274 ~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSi 353 (439)
+|+..+.+.+++.|||++.+.+|++||+++||++++++++|+.++++|+|||+||++|+|+||+|||||++|++++||||
T Consensus 241 ~~~~~v~~~la~~LGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~~~~GSSi 320 (467)
T 1fur_A 241 EYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSI 320 (467)
T ss_dssp THHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCSEECCCCSCCCTT
T ss_pred hHHHHHHHHHHHHhCCCCccCCCHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCCCCCCCCC
Confidence 99999999999999999888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHH
Q 013614 354 MPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISK 433 (439)
Q Consensus 354 MP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~ 433 (439)
|||||||+.+|.++++|++|+|++.+++.+...+++|+|.+.|++.+++++++.++.+++..++.+|++||+||++||++
T Consensus 321 MP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~~~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~ 400 (467)
T 1fur_A 321 MPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQ 400 (467)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCeeCHHHHHH
Confidence 99999999999999999999999999999888999999999999999999999999999999988899999999999999
Q ss_pred HHhhc
Q 013614 434 LLHEV 438 (439)
Q Consensus 434 ~l~~~ 438 (439)
+++.+
T Consensus 401 ~l~~~ 405 (467)
T 1fur_A 401 LLNES 405 (467)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99875
No 9
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=3.8e-104 Score=830.77 Aligned_cols=399 Identities=40% Similarity=0.663 Sum_probs=387.4
Q ss_pred cccccccCCCCccccccCccChHhHHHhhcCccCCCCCCC--CHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHH
Q 013614 36 SFREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERM--PEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQ 112 (439)
Q Consensus 36 ~~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~--~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ 112 (439)
++|+|+|++|+++||.++|||+||+|+++||++|+. ++ |+++|++|+.||+|+|.+|.++| ||++++++|.++|+
T Consensus 4 ~~r~e~d~~g~~~vp~~~~~g~~t~r~~~~f~~s~~--~~~~~~~~i~~~~~ve~A~a~a~~~~Gii~~~~a~~I~~a~~ 81 (478)
T 1jsw_A 4 NIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNN--KISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACD 81 (478)
T ss_dssp SEEEEECSSCEEEEESSCCCCHHHHHHHHHCCSCSC--CSCCTTSHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred CcCcccccCCCcCCCCccccchHHHHHHHhCCCcCc--cccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 389999999999999999999999999999999976 67 89999999999999999999999 99999999999999
Q ss_pred HHH-cCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCC--cccccccccCCCCChhcHHHHHHHHHHHHHH
Q 013614 113 EVA-EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE--KIVHPNDHVNRSQSSNDTFPTVMHIAAAMET 189 (439)
Q Consensus 113 ev~-~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~--~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~ 189 (439)
+|. +++..++|++++||+|+|||+|||+||||++++.|++|++.|+ + +|||||||+||||||+++|+++|++++.+
T Consensus 82 ~i~~~~~~~~~f~v~~~~~g~~~~~~mnv~~vIa~~~~e~~g~~~g~~~~-lHpnd~Vn~g~SsnDv~~Ta~~L~lr~~l 160 (478)
T 1jsw_A 82 EVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQY-LNPNDHVNKCQSTNDAYPTGFRIAVYSSL 160 (478)
T ss_dssp HHSTTTCSTTCCCCCSSCCSTTHHHHHHHHHHHHHHHHHTTTSCCTTSCS-SCCCCCCSCSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcchhccCCccchhhccCcccccccHHHHHHHHHHHHcCcccccccc-ccccccccCCCChhhHHHHHHHHHHHHHH
Confidence 999 8988899999999999999999999999999999999977786 5 99999999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCC
Q 013614 190 NSRLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGL 269 (439)
Q Consensus 190 ~~~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~ 269 (439)
..|.+.|..|+++|.+||++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||||+||++
T Consensus 161 -~~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~RL~~~~~~~~~~~lGg~AvGT~~ 239 (478)
T 1jsw_A 161 -IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGL 239 (478)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHGGGCEEECCGGGSCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHTTEECCSCCSSSSCS
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccccCCc
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCc
Q 013614 270 NTKKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEP 349 (439)
Q Consensus 270 ~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~ 349 (439)
+++++|+..+.+++++.|||++.+.+|++|++++||+++|++++|+.++++|+|||+||++|+|+||+|||||.+|++++
T Consensus 240 ~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gei~lp~~~~ 319 (478)
T 1jsw_A 240 NTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQA 319 (478)
T ss_dssp SCTTTHHHHHHHHHHHHHCCCCEECSCSSSBTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTTSCCCEECCCCSC
T ss_pred cCCcchHHHHHHHHHHHcCCCCCcCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCCCCC
Confidence 99999999999999999999987899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHH
Q 013614 350 GSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRE 429 (439)
Q Consensus 350 GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~e 429 (439)
|||||||||||+.+|.++++|++|+|++.+++.+...+++|+|++.|++.+++++++.++.+++..+..+|++||+||++
T Consensus 320 GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~p~~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~e 399 (478)
T 1jsw_A 320 GSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKE 399 (478)
T ss_dssp CCSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHH
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHhHHHHHHHHHhccchhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHccCeecHH
Confidence 99999999999999999999999999999999988999999999999999999999999999999998789999999999
Q ss_pred HHHHHHhhc
Q 013614 430 RISKLLHEV 438 (439)
Q Consensus 430 rm~~~l~~~ 438 (439)
||+++++.+
T Consensus 400 rm~~~l~~~ 408 (478)
T 1jsw_A 400 VCEGYVYNS 408 (478)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHhC
Confidence 999999865
No 10
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=100.00 E-value=7.7e-104 Score=826.08 Aligned_cols=401 Identities=57% Similarity=0.876 Sum_probs=385.7
Q ss_pred ccccccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHH
Q 013614 37 FREEKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVA 115 (439)
Q Consensus 37 ~r~e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~ 115 (439)
+|+|+|++|+++||.++|||+||+|+++||++|+...++|++++++|++||+|+|.+|.++| ||++++++|.++|++|.
T Consensus 3 ~r~e~d~~g~~~vp~~~~~g~~t~~~~~~f~~s~~~~~~~~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~ 82 (466)
T 1vdk_A 3 YRIERDTMGEVRVPADKYWGAQTQRSLENFRIGTDRFRMPLEIIRAYGMLKKAAARANLELGELPEEIAKAIIQAAEEVV 82 (466)
T ss_dssp -CEEEETTEEEECCTTCCCCHHHHHHHHHCCSSTTTCBCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCcCCCcccccchhhHHHHHhccCCCccccCcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999976222399999999999999999999999 99999999999999999
Q ss_pred cCccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccC-CcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHH
Q 013614 116 EGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLI 194 (439)
Q Consensus 116 ~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g-~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~ 194 (439)
+++..++|+++++|++++||+|||+|+||++++.|++|++.| ++ +|||||||+||||||+++|+++|++++.+.+.|.
T Consensus 83 ~~~~~~~f~~~~~q~~~~~~~~mn~~~via~~a~e~~g~~~g~~~-lHp~~~Vn~g~SsnD~~~Ta~~L~lr~~l~~~l~ 161 (466)
T 1vdk_A 83 QGKWDDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKPLGSKY-AHPNDHVNRGQSSNDTFPTAMYVAVALALHQRLY 161 (466)
T ss_dssp TTTTGGGCCCBSSSCTTCHHHHHHHHHHHHHHHHHHTTCCTTSCS-SCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHTHH
T ss_pred hcccccCCCchhhhccccccccccHHHHHHHHHHHHhCccccccc-cccccCcCCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 998888999999999999999999999999999999997788 77 9999999999999999999999999876523899
Q ss_pred HHHHHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCc
Q 013614 195 PNLKVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKG 274 (439)
Q Consensus 195 ~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~ 274 (439)
+.|..|+++|.+||++|++++||||||+|||||+||||||++|+++|.|+++||++++++++.+||||||+||+++++++
T Consensus 162 ~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~ 241 (466)
T 1vdk_A 162 PAVEGLIRTFTAKAQAFDQIVKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKGLYNLAIGGTAVGTGLNAHPR 241 (466)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHGGGGEECTTCTTTSSCTTSCTT
T ss_pred HHHHHHHHHHHHHHHHccCCeeeccccCccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCccCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCC
Q 013614 275 FDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIM 354 (439)
Q Consensus 275 ~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiM 354 (439)
|..++.+++++.|||+.++.+|++|++++||+++|++++|+.++++|+|||+||++|+|+||+|||||++|++++|||||
T Consensus 242 ~~~~v~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~~~~GSSiM 321 (466)
T 1vdk_A 242 FGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGNDVRWLASGPYAGIGEITIPANEPGSSIM 321 (466)
T ss_dssp HHHHHHHHHHHHHSSCCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCSEECCCCSCCSSCC
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeEECCCCCCcCCCC
Confidence 99999999999999998789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHH
Q 013614 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (439)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~ 434 (439)
||||||+.+|.++++|++|+|++.+++.+...+++|+|+++|++.+++++++..+.+++..++.+|++||+||++||+++
T Consensus 322 P~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~~~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~ 401 (466)
T 1vdk_A 322 PGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNVYKPVMAYSTLESINLLADAVASFDAHLAQGIEPNLERIEEY 401 (466)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCBTTBCSCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCEEcHHHHHHH
Confidence 99999999999999999999999999998889999999999999999999999999999999888999999999999999
Q ss_pred Hhhc
Q 013614 435 LHEV 438 (439)
Q Consensus 435 l~~~ 438 (439)
++.+
T Consensus 402 l~~~ 405 (466)
T 1vdk_A 402 LQKN 405 (466)
T ss_dssp HTTC
T ss_pred HHhc
Confidence 9865
No 11
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=4.9e-77 Score=623.18 Aligned_cols=354 Identities=23% Similarity=0.307 Sum_probs=315.9
Q ss_pred ccCccCh----HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcc
Q 013614 51 SDKLWGA----QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPL 125 (439)
Q Consensus 51 ~~~~~g~----~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~ 125 (439)
.++|||+ +|+|+++||++|+ ++|+.+++++..+|+|+|.+|.++| ||++++++|.++|++|.++...++|++
T Consensus 2 ~~~~~g~r~~~~t~~~~~~f~~s~---~~d~~l~~~~i~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~f~~ 78 (462)
T 2e9f_A 2 AHRTWGGRFGEGPDALAARFNASL---AFDRALWREDLWQNRVHARMLHAVGLLSAEELEAILKGLDRIEEEIEAGTFPW 78 (462)
T ss_dssp ------------CCSHHHHHHCCH---HHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTCSCC
T ss_pred CccccCCccchhhHHHHHhccCCC---ccCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHhcccCCc
Confidence 4689999 9999999999987 4688999999999999999999999 999999999999999988777788988
Q ss_pred cccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 126 VVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLH 205 (439)
Q Consensus 126 ~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~ 205 (439)
++ +++|+|||+ ++++.|++| +.|+| ||+ ||||||+++|+++|++++.+ ..|.+.|..|+++|.
T Consensus 79 ~~----~~~dv~~~~----~~~l~e~~g-~~g~~-vH~------g~SsnDv~~Ta~~l~lr~~l-~~l~~~l~~L~~~L~ 141 (462)
T 2e9f_A 79 RE----ELEDVHMNL----EARLTELVG-PPGGK-LHT------ARSRNDQVATDLRLYLRGAI-DELLALLLALRRVLV 141 (462)
T ss_dssp CG----GGCSHHHHH----HHHHHHHHC-TTHHH-HTT------TCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CC----CCCchHHHH----HHHHHHHcc-ccccc-eec------CCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 76 478999994 688899998 67777 885 99999999999999998775 699999999999999
Q ss_pred HHHHHccCc--ceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHH
Q 013614 206 SKSVEFKDI--VKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASA 282 (439)
Q Consensus 206 ~~A~~~~~~--~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~ 282 (439)
++|++|+++ +||||||+|||||+||||||++|+++|.|+++||.+++++++.+||||+|+ ||+++.++ ++
T Consensus 142 ~~A~~~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~-------~~ 214 (462)
T 2e9f_A 142 REAEKHLDPLYVLPGYTHLQRAQPVLLAHWFLAYYEMLKRDAGRLEDAKERLNESPLGAAALAGTGFPIDR-------HF 214 (462)
T ss_dssp HHHHHTTTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEECTTCCSSSCCSSCCCH-------HH
T ss_pred HHHHHccCcCccccCcccCccCeeccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccccCCCCCCH-------HH
Confidence 999999999 999999999999999999999999999999999999999999999999988 99999887 45
Q ss_pred HHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCC-cccCCCCCCCCch
Q 013614 283 VAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENE-PGSSIMPGKVNPT 361 (439)
Q Consensus 283 la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~-~GSSiMP~K~NP~ 361 (439)
+++.|||+. +..|.+|++++||++++++++|+.++++|+|||+||++|+|+| ||||++|+.. +|||||||||||+
T Consensus 215 ~a~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~s~e---~g~iel~e~~~~GSSiMP~K~NP~ 290 (462)
T 2e9f_A 215 TARELGFKA-PMRNSLDAVASRDFALEVLSALNIGMLHLSRMAEELILYSTEE---FGFVEVPDAFATGSSIMPQKKNPD 290 (462)
T ss_dssp HHHHTTCSE-ECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT---TCCEECCGGGCEECSSSSSCEECH
T ss_pred HHHHhCCCC-CCCCcHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcEEecCCCCCCCCCCCCCcCCH
Confidence 999999995 8899999999999999999999999999999999999999864 9999999975 5999999999999
Q ss_pred hhHHHHHHHHHHhhhhhHHHHhccc--cccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 362 QCEALTMVCAQVIGNHVAITVGGSN--GHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 362 ~~E~i~~~a~~v~G~~~~i~~~~~~--~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
.+|.++++|++|+|+..+++++..+ .+++++.... ...+++++..+..++..+.. +++||+||++||+++++++
T Consensus 291 ~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~--~~~l~~s~~~~~~~l~~~~~-~l~gl~vn~e~m~~~l~~~ 366 (462)
T 2e9f_A 291 ILELIRAKAGRVLGAFVGLSAVVKGLPLAYNKDLQED--KEPLLDALATYRDSLRLLAA-LLPGLKWRRERMWRAAEGG 366 (462)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHTTCCSSBCGGGGGG--HHHHHHHHHHHHHHHHHHHH-HGGGCEECHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhchhhh--HhHHHHHHHHHHHHHHHHHH-HhCcCEECHHHHHHHHhcC
Confidence 9999999999999999999865543 3455554442 23688999999999999976 9999999999999999753
No 12
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=100.00 E-value=7.7e-77 Score=622.56 Aligned_cols=356 Identities=20% Similarity=0.244 Sum_probs=315.5
Q ss_pred cccccCccCh----HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCC
Q 013614 48 LVPSDKLWGA----QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDH 122 (439)
Q Consensus 48 ~~p~~~~~g~----~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~ 122 (439)
+-|.++|||+ ++.|.+++|++|+ ++|+.++++++.+|+|+|.+|.++| ||++++++|.++|++|.++...++
T Consensus 4 ~~~~~~~~~~r~~~~~~~~~~~f~~s~---~~d~~~~~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~ 80 (468)
T 1k7w_A 4 EARGDKLWGGRFSGSTDPIMEKLNSSI---AYDQRLSEVDIQGSMAYAKALEKAGILTKTELEKILSGLEKISEEWSKGV 80 (468)
T ss_dssp ---------------CCHHHHHHHCCH---HHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcccccccccchhHHHHHHHccCCC---cccHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhhccc
Confidence 3466778887 9999999999887 4788999999999999999999999 999999999999999988777788
Q ss_pred CcccccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 123 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHN 202 (439)
Q Consensus 123 f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~ 202 (439)
|++++ +++|+||| +++++.|++| +.|+| ||+ ||||||++||+++|++++.+ ..|.+.|..|++
T Consensus 81 f~~~~----~~~dv~m~----~~~~l~e~~g-~~g~~-vH~------g~SsnDv~~Ta~~l~lr~~l-~~l~~~L~~L~~ 143 (468)
T 1k7w_A 81 FVVKQ----SDEDIHTA----NERRLKELIG-DIAGK-LHT------GRSRNDQVVTDLKLFMKNSL-SIISTHLLQLIK 143 (468)
T ss_dssp CCCCT----TCCSHHHH----HHHHHHHHHC-GGGGG-GGT------TCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred CccCC----CCCchHHH----HHHHHHHHcc-ccccc-eec------CCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 98876 47899988 4788999998 67877 885 99999999999999998775 699999999999
Q ss_pred HHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHH
Q 013614 203 SLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIAS 281 (439)
Q Consensus 203 aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~ 281 (439)
+|.++|++|++++||||||+|||+|+||||||++|+++|.|+++||.+++++++.+||||+|+ ||++|.++ +
T Consensus 144 ~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~-------~ 216 (468)
T 1k7w_A 144 TLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALTRDSERLGEVKKRINVLPLGSGALAGNPLDIDR-------E 216 (468)
T ss_dssp HHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSEECTTCTTTTCCTTCCCH-------H
T ss_pred HHHHHHHHccCCEeeccccCcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCCCCCCh-------H
Confidence 999999999999999999999999999999999999999999999999999999999999988 99999887 4
Q ss_pred HHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCC-cccCCCCCCCCc
Q 013614 282 AVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENE-PGSSIMPGKVNP 360 (439)
Q Consensus 282 ~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~-~GSSiMP~K~NP 360 (439)
++++.|||+. +..|++|++++||++++++++|+.++++|+|||+||++|+|+| ||||++|+.. +|||||||||||
T Consensus 217 ~la~~LG~~~-~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~s~e---~g~iel~e~~~~GSSiMP~K~NP 292 (468)
T 1k7w_A 217 MLRSELEFAS-ISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTSE---FGFLTLSDAFSTGASLMPQKKNP 292 (468)
T ss_dssp HHHHHHTCSE-ECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT---TCCEECCGGGCEEETTEEEEEEC
T ss_pred HHHHHcCCCC-CCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCceeccCCCCCCCCCCCCCCCc
Confidence 5999999995 8899999999999999999999999999999999999999864 9999999975 599999999999
Q ss_pred hhhHHHHHHHHHHhhhhhHHHHhccc--cccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 361 TQCEALTMVCAQVIGNHVAITVGGSN--GHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 361 ~~~E~i~~~a~~v~G~~~~i~~~~~~--~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
+.+|.++++|++|+|+..+++++..+ .+++++.... ...+++++..+..++..+.. |++||+||+++|++++++
T Consensus 293 ~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~--~~~l~~s~~~~~~~l~~~~~-~l~gl~vn~e~m~~~l~~ 368 (468)
T 1k7w_A 293 DSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQED--KEAVFDVVDTLTAVLQVATG-VISTLQISKENMEKALTP 368 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGGGH--HHHHHHHHHHHHHHHHHHHH-HHHHCEECHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhhhhhh--HhHHHHHHHHHHHHHHHHHH-HhCCCEECHHHHHHHhhC
Confidence 99999999999999999999865543 3555555442 23688999999999999976 999999999999999875
No 13
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=100.00 E-value=5.9e-76 Score=613.86 Aligned_cols=353 Identities=22% Similarity=0.243 Sum_probs=308.4
Q ss_pred cccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCccccc
Q 013614 50 PSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVW 128 (439)
Q Consensus 50 p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~ 128 (439)
|.+.|++.+.++++ | .+++++++|+.||+|+|.+|.++| ||++++++|.++|++ ++|+++.+
T Consensus 5 ~~~ry~~~~~~~~i--~--------s~~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~~~-------~~f~~~~~ 67 (450)
T 1re5_A 5 LFDAYFTAPAMREI--F--------SDRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQA-------ERYDTGAL 67 (450)
T ss_dssp TTHHHHSCHHHHHH--T--------SHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHCCG-------GGSCHHHH
T ss_pred chhhccCCHHHHHH--c--------CcHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc-------CCCCHHHH
Confidence 45534444888888 6 378999999999999999999999 999999999999865 24788888
Q ss_pred ccCCCcccccchhHHHHHHH--HHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 129 QTGSGTQSNMNANEVIANRA--AEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHS 206 (439)
Q Consensus 129 ~~~~g~~~~~~~nevi~~~~--~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~ 206 (439)
+++.++ +.|||++++. .|++|... . .|++|||+||||||+++|+++|++++.+ ..|.+.|..|+++|.+
T Consensus 68 ~~~~~~----~~~dV~a~~~~l~e~~g~~~--~--~~~~~vh~g~SsnD~~~Ta~~l~lr~~l-~~l~~~l~~L~~~L~~ 138 (450)
T 1re5_A 68 ANAIAT----AGNSAIPLVKALGKVIATGV--P--EAERYVHLGATSQDAMDTGLVLQLRDAL-DLIEADLGKLADTLSQ 138 (450)
T ss_dssp HHHHHH----HSSSHHHHHHHHHHHHHHHC--G--GGGGGTTTTCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHhc----cCccHHHHHHHHHHHhCCCC--C--cccccccCCCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 776554 5678877753 58887310 0 1577888999999999999999998775 6999999999999999
Q ss_pred HHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHH
Q 013614 207 KSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEE 286 (439)
Q Consensus 207 ~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~ 286 (439)
||++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|||| |+||+.+++++ +..+.+++++.
T Consensus 139 ~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGG-AvGt~~~~~~~-~~~~~~~la~~ 216 (450)
T 1re5_A 139 QALKHADTPLVGRTWLQHATPVTLGMKLAGVLGALTRHRQRLQELRPRLLVLQFGG-ASGSLAALGSK-AMPVAEALAEQ 216 (450)
T ss_dssp HHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSBCCCCC-TTSSCGGGGGG-HHHHHHHHHHH
T ss_pred HHHHccCCeeeccccCccCccCcHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcc-hhcCCcccCcc-hHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 89999999887 88999999999
Q ss_pred cCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhH
Q 013614 287 TSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCE 364 (439)
Q Consensus 287 LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E 364 (439)
|||+.++.+ ++++||++++++++|+.++++|+|||+||++|+ ++|||||.+|. +++|||||||||||+.+|
T Consensus 217 LG~~~~~~~----~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~---~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E 289 (450)
T 1re5_A 217 LKLTLPEQP----WHTQRDRLVEFASVLGLVAGSLGKFGRDISLLM---QTEAGEVFEPSAPGKGGSSTMPHKRNPVGAA 289 (450)
T ss_dssp HTCBCCSSC----CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTTCCEECCCCC----------CCCCHHHH
T ss_pred hCcCCCCcc----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccCcceeecccccCCCccccCCCCcCCHHHH
Confidence 999986544 589999999999999999999999999999999 57999999997 699999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 365 ALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 365 ~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
.++++|++|+|++.+++.+. ..++|+|.+.|.+.|++++++..+.+++..+..+|++||+||++||+++++.+
T Consensus 290 ~i~~~a~~v~g~~~~~~~~~-~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~s 362 (450)
T 1re5_A 290 VLIGAATRVPGLLSTLFAAM-PQEHERSLGLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLT 362 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-CCCTTBCSSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHhC-hhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHhC
Confidence 99999999999999998754 56999999999999999999999999999999999999999999999999754
No 14
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=3.6e-75 Score=608.31 Aligned_cols=353 Identities=20% Similarity=0.253 Sum_probs=317.4
Q ss_pred CccCh----HhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccc
Q 013614 53 KLWGA----QTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVV 127 (439)
Q Consensus 53 ~~~g~----~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~ 127 (439)
+|||+ ++.+.+++|+.|.. +|..++++...+++|+|.+|.++| ||++++++|.++|+++.++...++|++++
T Consensus 2 ~~~~gr~~~~~~~~~~~f~~s~~---~d~~l~~~~i~~~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~~~~~~ 78 (457)
T 1tj7_A 2 ALWGGRFTQAADQRFKQFNDSLR---FDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILE 78 (457)
T ss_dssp -CCCTTCSSCCCHHHHHHHCCHH---HHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHCGGGGGG
T ss_pred cccccccccchHHHHHHHhcChh---hhHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHhcCCcCcCC
Confidence 47776 89999999987754 477899999999999999999999 99999999999999998776777888875
Q ss_pred cccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 128 WQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSK 207 (439)
Q Consensus 128 ~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~ 207 (439)
+ +++|+|||+| +++.|++| +.|+| ||+ ||||||++||+++|++++.+ ..|.+.|..|+++|.++
T Consensus 79 ~---~~~dv~~~v~----~~l~e~~g-~~g~~-vH~------g~SsnD~~~Ta~~l~lr~~l-~~l~~~l~~l~~~L~~~ 142 (457)
T 1tj7_A 79 S---DAEDIHSWVE----GKLIDKVG-QLGKK-LHT------GRSRNDQVATDLKLWCKDTV-SELLTANRQLQSALVET 142 (457)
T ss_dssp S---CCSSHHHHHH----HHHHHHHG-GGGGG-TTT------TCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred C---CCCcHHHHHH----HHHHHHcc-ccccc-eec------CCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 3 6899999954 78889998 56777 885 99999999999999998775 69999999999999999
Q ss_pred HHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccc-cCCCCCCCcchHHHHHHHHHH
Q 013614 208 SVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAV-GTGLNTKKGFDVKIASAVAEE 286 (439)
Q Consensus 208 A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~ 286 (439)
|++|++++||||||+|||+|+||||||++|+++|.|+++||.+++++++.+||||||+ ||++++++ +++++.
T Consensus 143 A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~-------~~la~~ 215 (457)
T 1tj7_A 143 AQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDR-------EQLAGW 215 (457)
T ss_dssp HHTTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCBCTTCTTTTCCSSCCCH-------HHHHHH
T ss_pred HHHccCCeeeccccCcCCeechHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCCCCCH-------HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988 99999887 469999
Q ss_pred cCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCC-cccCCCCCCCCchhhHH
Q 013614 287 TSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENE-PGSSIMPGKVNPTQCEA 365 (439)
Q Consensus 287 LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~-~GSSiMP~K~NP~~~E~ 365 (439)
|||+. +..|++|++++||++++++++|+.++++|+|||+||++|+|+| ||||++|+.. +|||||||||||+.+|.
T Consensus 216 LGl~~-~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~e---~g~iel~e~~~~GSSiMP~K~NP~~~E~ 291 (457)
T 1tj7_A 216 LGFAS-ATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGE---AGFVELSDRVTSGSSLMPQKKNPDALEL 291 (457)
T ss_dssp HTCSS-BCSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT---TCCEECCGGGCBCCTTCTTCCBCHHHHH
T ss_pred cCCCC-CCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCceeccCCCCCCCCCCCCCCCcHHHHH
Confidence 99995 8899999999999999999999999999999999999999864 9999999974 79999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHhccc--cccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 366 LTMVCAQVIGNHVAITVGGSN--GHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 366 i~~~a~~v~G~~~~i~~~~~~--~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
++++|++|+|+..+++++..+ .+++++... -...+++++..+..++..+.. |++||+||++||+++++++
T Consensus 292 i~~~a~~v~g~~~~~~~~~~~~p~~~~RDl~~--~~~~l~~s~~~~~~~l~~~~~-~l~gl~vn~~~m~~~l~~~ 363 (457)
T 1tj7_A 292 IRGKCGRVQGALTGMMMTLKGLPLAYNKDMQE--DKEGLFDALDTWLDCLHMAAL-VLDGIQVKRPRCQEAAQQG 363 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTCCSSCCGGGGG--HHHHHHHHHHHHHHHHHHHHH-HHTTCEECHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHhhcchhh--HHhHHHHHHHHHHHHHHHHHH-HHccCEECHHHHHHHHhcC
Confidence 999999999999999765544 345554432 123588999999999999976 9999999999999999753
No 15
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=100.00 E-value=1e-74 Score=604.44 Aligned_cols=349 Identities=19% Similarity=0.199 Sum_probs=302.6
Q ss_pred cccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCccccc
Q 013614 50 PSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVW 128 (439)
Q Consensus 50 p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~ 128 (439)
|-+-+|+...++.+ |+ ++.++++|+.||+|+|.+|.++| ||++++++|.++|++ ++|+++.+
T Consensus 7 ~~~~ry~~~~~~~~--~s--------d~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~-------~~~~~~~~ 69 (451)
T 3c8t_A 7 LYGRSFADDKMREL--FS--------AQSFISRCVETEVALARAQARLGIIPEDAAAGITAAART-------FAPEMERL 69 (451)
T ss_dssp CSSCCCSCHHHHHH--TS--------HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH-------CCCCHHHH
T ss_pred ccccccCcHHHHHH--cC--------CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhhh-------cCCCHHHH
Confidence 44447777888888 63 78999999999999999999999 999999999999986 35777778
Q ss_pred ccCCCcccccchhHHHHHHH--HHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 129 QTGSGTQSNMNANEVIANRA--AEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHS 206 (439)
Q Consensus 129 ~~~~g~~~~~~~nevi~~~~--~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~ 206 (439)
+++.++ |.|||++++. .+++| +.|++ ||+ ||||||+++|+++|++++.+ ..|.+.|..|+++|.+
T Consensus 70 ~~~~~~----~~~dVia~~~~l~e~~g-~~g~~-vH~------g~SsnDv~~Ta~~L~lr~~l-~~l~~~l~~L~~~L~~ 136 (451)
T 3c8t_A 70 RDDTEI----VGYPILPLVEQLSAHAG-EAGKY-LHW------GATTQDIMDTATVLQIRDGL-ALISRRIESVRKALAA 136 (451)
T ss_dssp HHHHHH----HSSSHHHHHHHHHHHHG-GGGGG-SSS------SCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHhhc----CCCcHHHHHHHHHHHcc-ccccc-ccC------CCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 766554 6788888754 79998 45777 884 99999999999999998775 6999999999999999
Q ss_pred HHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHH
Q 013614 207 KSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEE 286 (439)
Q Consensus 207 ~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~ 286 (439)
||++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|||| |+||+.+.++ |+..+.+++++.
T Consensus 137 ~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-AvGT~~~~~~-~~~~~~~~~a~~ 214 (451)
T 3c8t_A 137 LARNHRDTPMAGRTHLQHALPVTFGYKAAVWLSAFDRHAARLEEISPRVLVVEFSG-ASGTLASLGT-RGLDVQRELARE 214 (451)
T ss_dssp HHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCBCCCCC-TTSSCGGGTT-CHHHHHHHHHHH
T ss_pred HHHHccCceeecccCCCCceeehHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hhhcCccccc-ccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 8999999877 899999999999
Q ss_pred cCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhH
Q 013614 287 TSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCE 364 (439)
Q Consensus 287 LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E 364 (439)
|||+.++.+| +.+||+++|++++|+.++++|+|||+||++|+ ++|||||.+|. +++|||||||||||+.+|
T Consensus 215 LGl~~~~~~~----~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~---~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E 287 (451)
T 3c8t_A 215 LNLGVPSITW----HSARDAVAETVQFLALVSGSLGKLAMDISIMM---TTELGEVAEPFVRHRGASSTMPQKQNPVSCE 287 (451)
T ss_dssp HTCBCCSSCC----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTTCCEECC---------------CCHHHH
T ss_pred hCCCCCCCCC----ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CccccccccccccCCCCCCCCCCCcCCHHHH
Confidence 9999876665 45999999999999999999999999999999 57999999997 699999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 365 ALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 365 ~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
.++++|++|+|+.++++.+ ..+++|+|...|.+.++++++...+.+.+..+..+|++||+||++||+++++.+
T Consensus 288 ~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s 360 (451)
T 3c8t_A 288 LILAGARIVRNHATSMLDA-MIHDFERATGPWHLEWSAVPEGFAVASGILYQAEFMLGGLQVFPDRMRENLDHS 360 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHhc-CchhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHhc
Confidence 9999999999999999874 678999999999988888877766666666677889999999999999999753
No 16
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=100.00 E-value=2e-74 Score=594.16 Aligned_cols=339 Identities=22% Similarity=0.272 Sum_probs=290.8
Q ss_pred cccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCccccc
Q 013614 50 PSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVW 128 (439)
Q Consensus 50 p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~ 128 (439)
|-+-+|+.+.++.+ | .|++++++|++||+|+|.+|.++| ||++++++|.++ +|+++.+
T Consensus 5 p~~~ry~~~~~~~i--~--------sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a-----------~~d~~~~ 63 (403)
T 1dof_A 5 PFDWRYGSEEIRRL--F--------TNEAIINAYLEVERALVCALEELGVAERGCCEKVNKA-----------SVSADEV 63 (403)
T ss_dssp GGGTTSSCHHHHTT--S--------SHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHC-----------CCCTTTC
T ss_pred CcccccCcHHHHHH--c--------ChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC-----------CCCHHHH
Confidence 45557777888888 6 378999999999999999999999 999999999876 4677888
Q ss_pred ccCCCcccccchhHHHHHHH--HHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 129 QTGSGTQSNMNANEVIANRA--AEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHS 206 (439)
Q Consensus 129 ~~~~g~~~~~~~nevi~~~~--~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~ 206 (439)
+++.++ |.|||++++. .|++| |++ ||+ ||||||++||+++|++++.+ ..|.+.|..|+++|.+
T Consensus 64 ~~~~~~----~~~dVia~~~~l~e~~G---g~~-vH~------g~SsnD~~~Ta~~l~~r~~l-~~l~~~l~~L~~~L~~ 128 (403)
T 1dof_A 64 YRLERE----TGHDILSLVLLLEQKSG---CRY-VHY------GATSNDIIDTAWALLIRRAL-AAVKEKARAVGDQLAS 128 (403)
T ss_dssp ------------CHHHHHHHHHHHHHC---CSC-TTT------TCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHhhc----cCCcHHHHHHHHHHHcC---CCc-ccC------CCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 877665 6789888854 78897 666 874 99999999999999998775 6999999999999999
Q ss_pred HHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHH
Q 013614 207 KSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEE 286 (439)
Q Consensus 207 ~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~ 286 (439)
||++|++++||||||+|||+|+||||||++|+++|.|+ +||++++++++.+|||| |+|||.+.++ |+..+.+++++.
T Consensus 129 ~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~-~rL~~~~~~~~~~~lGg-AvGt~~~~~~-~~~~~~~~~a~~ 205 (403)
T 1dof_A 129 MARKYKTLEMVGRTHGQWAEPITLGFKFANYYYELYIA-CRQLALAEEFIRAKIGG-AVGTMASWGE-LGLEVRRRVAER 205 (403)
T ss_dssp HHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHH-HHHHHHHHHHCCBCCCC-TTSSCGGGGG-GHHHHHHHHHHH
T ss_pred HHHHhcCCeeeccccCcccccCcHHHHHHHHHHHHHHH-HHHHHHHHHhcccCccH-HHhhCccccc-ccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999 8999999876 889999999999
Q ss_pred cCCCCccCCchhhHhh-cchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCCCCCCchhhHH
Q 013614 287 TSLPFVTAENKFEALA-AHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEA 365 (439)
Q Consensus 287 LGl~~~~~~n~~da~~-~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP~K~NP~~~E~ 365 (439)
|||+.++.+| +. +||+++|++++|+.++++|+|||+||++|+ ++|||||++| + +|||||||||||+.+|.
T Consensus 206 lGl~~~~~~~----~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~---~~e~~ei~lp-~-~GSSiMP~K~NP~~~E~ 276 (403)
T 1dof_A 206 LGLPHHVITT----QVAPRESFAVLASALALMAAVFERLAVEIRELS---RPEIGEVVEG-G-GGSSAMPHKANPTASER 276 (403)
T ss_dssp TTCCBCSSCS----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTTCSEESC-C----------CCCHHHHH
T ss_pred hCcCCCCCcc----hhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCccCeEeCC-C-CccCCCCCCCCchHHHH
Confidence 9999876654 56 999999999999999999999999999999 5799999999 8 99999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhh
Q 013614 366 LTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHE 437 (439)
Q Consensus 366 i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~ 437 (439)
++++|++|+|+..+++. +..+++|+|...|.+.|..+++...+.+.+..+..+|++||+||++||+++++.
T Consensus 277 i~~~a~~v~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~ 347 (403)
T 1dof_A 277 IVSLARYVRALTHVAFE-NVALWHERDLTNSANERVWIPEALLALDEILTSALRVLKNVYIDEERITENLQK 347 (403)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCCCTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-cCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHh
Confidence 99999999999999977 456899999999998877766555555555555578999999999999999974
No 17
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=100.00 E-value=5.9e-75 Score=606.92 Aligned_cols=348 Identities=19% Similarity=0.235 Sum_probs=301.6
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCC
Q 013614 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGS 132 (439)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~ 132 (439)
+|+...++.+ |+ |+.++++|+.||+|+|.+|.++| ||++.+++|.++|++|. ++|+++.++++.
T Consensus 11 ry~~~~~~~~--~s--------d~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~-----~~~~~~~~~~~~ 75 (454)
T 1q5n_A 11 LFYQRDVTEI--FS--------DRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTAI-----DKIDFDALATAT 75 (454)
T ss_dssp HHSCHHHHHH--TS--------HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTHH-----HHCCHHHHHHHH
T ss_pred ccCcHHHHHH--cC--------cHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhh-----hcCCHHHHHHHh
Confidence 6667788888 63 78999999999999999999999 99999999999999874 246777777665
Q ss_pred CcccccchhHHHHHHH--HHHhC---cccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 133 GTQSNMNANEVIANRA--AEILG---HKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSK 207 (439)
Q Consensus 133 g~~~~~~~nevi~~~~--~e~lg---~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~ 207 (439)
++ |.|||++++. .|++| ++.| +|||+||||||+++|+++|++++.+ ..|.+.|..|+++|.+|
T Consensus 76 ~~----~~~dVia~~~~l~e~~g~~~g~~~-------~~vH~g~SsnD~~~Ta~~L~~r~~l-~~l~~~l~~L~~~L~~~ 143 (454)
T 1q5n_A 76 GL----AGNIAIPFVKQLTAIVKDADEDAA-------RYVHWGATSQDILDTACILQCRDAL-AIVQNQVQQCYETALSQ 143 (454)
T ss_dssp HH----HSSSHHHHHHHHHHHHHTTCTTGG-------GGTTTTCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred hc----cCCcHHHHHHHHHHHhccccCCcc-------ccccCCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 54 6788887754 78885 2334 4555799999999999999998775 69999999999999999
Q ss_pred HHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHc
Q 013614 208 SVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEET 287 (439)
Q Consensus 208 A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~L 287 (439)
|++|++++||||||+|||||+||||||++|+++|.|+++||.+++++++.+|||| |+||+.+.++ |+..+.+.+++.|
T Consensus 144 A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-AvGT~~~~~~-~~~~~~~~~a~~L 221 (454)
T 1q5n_A 144 AQTYRHQVMMGRTWLQQALPITLGHKLARWASAFKRDLDRINAIKARVLVAQLGG-AVGSLASLQD-QGSIVVEAYAKQL 221 (454)
T ss_dssp HHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSBCCCCC-TTSSCGGGTT-CHHHHHHHHHHHH
T ss_pred HHHhcCceeeccccCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-HhhcCccccc-ccHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999 8899999876 8999999999999
Q ss_pred CCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHH
Q 013614 288 SLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEA 365 (439)
Q Consensus 288 Gl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~ 365 (439)
||+.++.+| +.+||++++++++|+.++++|+|||+||++|+ ++||||+.+|. +++|||||||||||+.+|.
T Consensus 222 G~~~~~~~~----~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~---~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~ 294 (454)
T 1q5n_A 222 KLGQTACTW----HGERDRIVEIASVLGIITGNVGKMARDWSLMM---QTEIAEVFEPTAKGRGGSSTMPHKRNPVAAAS 294 (454)
T ss_dssp TCBCCSSCC----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTTCCEECCC-------------CCCHHHHH
T ss_pred CcCCCCCCC----ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchhccccccCCCCCccCCCCCCCHHHHH
Confidence 999876665 46999999999999999999999999999999 57999999997 6999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 366 LTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 366 i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
++++|++|+|++++++.+ ..+++|+|...|.+.++++++...+.+.+..+..+|++||+||++||+++++.+
T Consensus 295 i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s 366 (454)
T 1q5n_A 295 VLAAANRVPALMSSIYQS-MVQEHERSLGAWHAEWLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQNIECT 366 (454)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCCTTSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHh-ccchhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHhC
Confidence 999999999999999874 678999999999988888877766666666677889999999999999999754
No 18
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=100.00 E-value=1.7e-74 Score=599.43 Aligned_cols=340 Identities=20% Similarity=0.239 Sum_probs=302.9
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCC
Q 013614 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGS 132 (439)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~ 132 (439)
+|+.+.++.+ | .|++++++|+.||+|+|.+|.++| ||++.+++|.++| +|+++.++++.
T Consensus 3 ry~~~~~~~~--~--------sd~~~i~~~~~v~~A~a~a~~~~Gii~~~~a~~I~~a~----------~~d~~~i~~~~ 62 (429)
T 1c3c_A 3 RYSLSPMKDL--W--------TEEAKYRRWLEVELAVTRAYEELGMIPKGVTERIRNNA----------KIDVELFKKIE 62 (429)
T ss_dssp GGCCTTHHHH--T--------SHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHC----------CCCHHHHHHHH
T ss_pred CcccHHHHHH--c--------ChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhC----------CCCHHHHHHHH
Confidence 5667888888 6 378999999999999999999999 9999999999987 35666676654
Q ss_pred CcccccchhHHHHHHH--HHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 133 GTQSNMNANEVIANRA--AEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVE 210 (439)
Q Consensus 133 g~~~~~~~nevi~~~~--~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~ 210 (439)
++ |.|||++++. .|++|+ .|+| ||+ ||||||++||+++|++++.+ ..|.+.|..|+++|.++|++
T Consensus 63 ~~----~~~dVia~~~~l~e~~g~-~g~~-vH~------g~SsnD~~~Ta~~l~lr~~~-~~l~~~l~~l~~~L~~~A~~ 129 (429)
T 1c3c_A 63 EK----TNHDVVAFVEGIGSMIGE-DSRF-FHY------GLTSSDVLDTANSLALVEAG-KILLESLKEFCDVLWEVANR 129 (429)
T ss_dssp HH----HCCHHHHHHHHHHHHHGG-GGGG-TTT------TCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred hc----cCCChHHHHHHHHHHcCc-cccc-ccC------CCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 43 6788888754 799984 4777 884 99999999999999998775 69999999999999999999
Q ss_pred ccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCC
Q 013614 211 FKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLP 290 (439)
Q Consensus 211 ~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~ 290 (439)
|++++||||||+|||+|+||||||++|+++|.|+++||.+++++++.+|||| |+||+.+.+ ..+.+++++.|||+
T Consensus 130 ~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-AvGt~~~~~----~~~~~~~a~~LGl~ 204 (429)
T 1c3c_A 130 YKHTPTIGRTHGVHAEPTSFGLKVLGWYSEMKRNVQRLERAIEEVSYGKISG-AVGNYANVP----PEVEEKALSYLGLK 204 (429)
T ss_dssp TTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCC-TTSSCSSSC----HHHHHHHHHHTTCE
T ss_pred hcCCeeecCcCCCcCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCch-hhcCCccCC----HHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999 899998875 46789999999999
Q ss_pred CccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHHHHH
Q 013614 291 FVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALTM 368 (439)
Q Consensus 291 ~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~i~~ 368 (439)
.++.+ |++.+||++++++++|+.++++|+|||+||++|+ ++||||+.+|. +++|||||||||||+.+|.+++
T Consensus 205 ~~~~~---d~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~---~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~ 278 (429)
T 1c3c_A 205 PEPVS---TQVVPRDRHAFYLSTLAIVAAGIERIAVEIRHLQ---RTEVLEVEEPFRKGQRGSSAMPHKKNPITCERLTG 278 (429)
T ss_dssp ECSSC---SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTTCSEECCCCC-----CCCTTCCCCHHHHHHHH
T ss_pred CCCCC---cCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchhccccccCCCcCCCCCCCCCcHHHHHHHH
Confidence 85544 5667999999999999999999999999999999 57999999997 6999999999999999999999
Q ss_pred HHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 369 VCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 369 ~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
+|++|+|+..+++.+ ..+++|+|.+.|.+.++++++...+.+.+..+..+|++||+||++||+++++.+
T Consensus 279 ~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~s 347 (429)
T 1c3c_A 279 LSRMMRAYVDPSLEN-IALWHERDISHSSVERYVFPDATQTLYYMIVTATNVVRNMKVNEERMKKNIDLT 347 (429)
T ss_dssp HHHHHHHTHHHHHHT-TCCSTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhc-CCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHCcCeeCHHHHHHHHHhc
Confidence 999999999999875 478999999999999999988877777777778899999999999999999754
No 19
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=100.00 E-value=4.1e-74 Score=598.59 Aligned_cols=341 Identities=19% Similarity=0.186 Sum_probs=307.8
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCC
Q 013614 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGS 132 (439)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~ 132 (439)
.|-.+.++++ | +|++++++|+.||+|+|.+|.++| ||++.+++|.++| +|+++.++++.
T Consensus 13 ~~~~~~~~~i--~--------sd~~~i~~~~~v~~A~a~a~~~~G~i~~~~a~~I~~a~----------~~d~~~i~~~~ 72 (444)
T 2pfm_A 13 RYTRPEMGAI--W--------TEENKFKAWLEVEILACEAWAELGDIPKEDVKKIREHA----------SFDIDRIYEIE 72 (444)
T ss_dssp TTCCHHHHHH--T--------SHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHC----------CCCHHHHHHHH
T ss_pred hcchHHHHHH--c--------ChHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhC----------CCCHHHHHHHh
Confidence 5666888888 6 378999999999999999999999 9999999999887 35666676665
Q ss_pred CcccccchhHHHHHHH--HHHhC-cccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 133 GTQSNMNANEVIANRA--AEILG-HKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSV 209 (439)
Q Consensus 133 g~~~~~~~nevi~~~~--~e~lg-~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~ 209 (439)
++ |.|||++++. .|++| ++.|+| || +||||||++||+++|++++.+ ..|.+.|..|+++|.+||+
T Consensus 73 ~~----~~~dVia~~~~l~e~~g~g~~g~~-vH------~g~SsnDv~~Ta~~L~lr~~l-~~l~~~l~~L~~~L~~~A~ 140 (444)
T 2pfm_A 73 KE----TRHDVVAFTRAVSETPALGEERKW-VH------YGLTSTDVVDTALSYILKQAN-EIILKDLENFVSILANKAK 140 (444)
T ss_dssp HH----HCCHHHHHHHHHHTCTTCCGGGGG-TT------TTCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred cc----CCCCHHHHHHHHHHHcCCCccccc-cc------CCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 43 6789888854 78895 577777 88 499999999999999998775 6999999999999999999
Q ss_pred HccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCC
Q 013614 210 EFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSL 289 (439)
Q Consensus 210 ~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl 289 (439)
+|++++||||||+|||+|+||||||++|+++|.|+++||.+++++++.+|||| |+||+.+.+ ..+.+.+++.|||
T Consensus 141 ~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-AvGt~~~~~----~~~~~~~a~~LGl 215 (444)
T 2pfm_A 141 EHKYTIMMGRTHGVHAEPTTFGLKLGLWYEEMKRNVERFKQAANTVRVGKLSG-AVGTYANID----PFVEKYVCENLGL 215 (444)
T ss_dssp HTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHTCEECCCC-TTSSCTTSC----HHHHHHHHHHTTC
T ss_pred HhcCCeeecccCCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCch-hhccCCcCC----HHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999 899998875 4678999999999
Q ss_pred CCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCcccCCCCCCCCchhhHHHH
Q 013614 290 PFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEPGSSIMPGKVNPTQCEALT 367 (439)
Q Consensus 290 ~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~GSSiMP~K~NP~~~E~i~ 367 (439)
+.++.+ |++.+||++++++++|+.++++|+|||+||++|+ ++||||+.+|. +++|||||||||||+.+|.++
T Consensus 216 ~~~~~~---d~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~---~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~ 289 (444)
T 2pfm_A 216 EAAPIS---TQTLQRDRHAHYMSTLALIATSIEKMAVEIRGLQ---KSETREVEEAFAKGQKGSSAMPHKRNPIGSENMT 289 (444)
T ss_dssp EECSSC---SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTTCSEECCCCTTCCSCSSCTTCCCCHHHHHHH
T ss_pred CCCCCC---cCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cccccccccccccCCCcCccCCcccCCHHHHHHH
Confidence 985544 5667999999999999999999999999999999 57999999997 699999999999999999999
Q ss_pred HHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 368 MVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 368 ~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
++|++|+|+..+++.+ ..+++|+|.+.|.+.|+++++...+.+.+..+..+|++||+||++||+++++.+
T Consensus 290 ~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s 359 (444)
T 2pfm_A 290 GLARVIRGYMMTAYEN-VPLWHERDISHSSAERVILPDATIALNYMLNRFGNIVKNLTVYPENMKRNMTRT 359 (444)
T ss_dssp HHHHHHHHHHHHHHHT-SCCCTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHh-CcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhC
Confidence 9999999999999875 579999999999999999987777777777777899999999999999999754
No 20
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=100.00 E-value=1.2e-72 Score=572.38 Aligned_cols=342 Identities=20% Similarity=0.180 Sum_probs=292.3
Q ss_pred CccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccC
Q 013614 53 KLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTG 131 (439)
Q Consensus 53 ~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~ 131 (439)
.||+.+.++.+ |+ +++++++|++||+|+|.+|.++| ||++++++|.++|+++. |+++.++++
T Consensus 13 ~~~~~~~m~~~--fs--------~~~~i~~~~~ve~A~a~a~~~~G~i~~~~a~~I~~~~~~i~-------~~~~~~~~~ 75 (359)
T 2fel_A 13 GLFGDSEIIEL--FS--------AKADIDAMIRFETALAQAEAEASIFADDEAEAIVSGLSEFA-------ADMSALRHG 75 (359)
T ss_dssp HHHCCHHHHGG--GS--------HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTCC-------CCHHHHHHH
T ss_pred cccCCHHHHHH--cC--------cHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhcc-------ccHHHHHhh
Confidence 47888889998 63 78999999999999999999999 99999999999998753 567777777
Q ss_pred CCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 013614 132 SGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEF 211 (439)
Q Consensus 132 ~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~ 211 (439)
.+++.| ++++++.+ +.+++|++.|++ || +|+||||++||+++|++++.+ ..|.+.|..|+++|.++|++|
T Consensus 76 ~~~~~~-~~~~~~~~-l~~~~g~~~~~~-vH------~G~SsnDv~~Ta~~l~lr~~l-~~l~~~L~~l~~~L~~~A~~~ 145 (359)
T 2fel_A 76 VAKDGV-VVPELIRQ-MRAAVAGQAADK-VH------FGATSQDVIDTSLMLRLKMAA-EIIATRLGHLIDTLGDLASRD 145 (359)
T ss_dssp HHHHSS-SHHHHHHH-HHTTSCGGGGGG-TT------TTCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCC-cHHHHHHH-HHHHcCccccch-hc------CCCCHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 777666 88888765 566777555554 55 699999999999999998775 699999999999999999999
Q ss_pred cCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCC
Q 013614 212 KDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPF 291 (439)
Q Consensus 212 ~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~ 291 (439)
++++||||||+|||||+||||+|++|+++|.|+++||++++++++.+|||| |+||+. ..++|+..+.+++++.|||+.
T Consensus 146 ~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-avGT~~-~~~~~~~~~~~~~a~~LG~~~ 223 (359)
T 2fel_A 146 GHKPLTGYTRMQAAIGITVADRAAGWIAPLERHLLRLETFAQNGFALQFGG-AAGTLE-KLGDNAGAVRADLAKRLGLAD 223 (359)
T ss_dssp TTSEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCSBCCCCC-TTSSCT-TTGGGHHHHHHHHHHHHTCBC
T ss_pred cCcEeeccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcH-HhccCc-cCcchHHHHHHHHHHHhCcCC
Confidence 999999999999999999999999999999999999999999999999999 899964 456788899999999999998
Q ss_pred ccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCCCCCCchhhHHHHHHHH
Q 013614 292 VTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCA 371 (439)
Q Consensus 292 ~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP~K~NP~~~E~i~~~a~ 371 (439)
++ +++++||+++|++++|+.++++|+|||+||++|+| +| ||+.+|. ++|||||||||||+.+|.++++|+
T Consensus 224 ~~-----~~~~~RD~~~e~~~~l~~~a~~L~kia~Dirll~s---~e-~Ei~~~~-~~GSS~MP~K~NP~~~E~i~~~a~ 293 (359)
T 2fel_A 224 RP-----QWHNQRDGIAEFANLLSLVTGTLGKFGQDIALMAE---IG-SEIRLSG-GGGSSAMPHKQNPVNAETLVTLAR 293 (359)
T ss_dssp CC-----CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HC-TTEEEC-------------CCHHHHHHHHHHH
T ss_pred Cc-----hHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CC-CeecCCC-CCCCccCCcccCCHHHHHHHHHHH
Confidence 54 36789999999999999999999999999999997 68 9999996 599999999999999999999999
Q ss_pred HHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHH
Q 013614 372 QVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (439)
Q Consensus 372 ~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~ 434 (439)
++.|+..+... ++.+|+|++...+...|..++....+.+.+......+++||+||+++|..+
T Consensus 294 ~v~~~~~~~~~-~~~~~~er~~~~~~~e~~~lp~~~~~~~~~L~~~~~v~~~l~v~~~~m~~~ 355 (359)
T 2fel_A 294 FNAVQISALHQ-SLVQEQERSGAGWMLEWLTLPQMVTATGTSLLVAERLAAQIDRLGADESHH 355 (359)
T ss_dssp HHHHHHHHHHH-TTCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC-----
T ss_pred HHHHHHHHHHH-HhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHhCcc
Confidence 99999998774 678899999888888888888888888888888889999999999999865
No 21
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=100.00 E-value=3.9e-72 Score=586.34 Aligned_cols=356 Identities=15% Similarity=0.109 Sum_probs=312.2
Q ss_pred cCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CC------HHHHHHHHHHHHHHHcCccCCCCc
Q 013614 52 DKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LD------PAIGKAIMQAAQEVAEGKLNDHFP 124 (439)
Q Consensus 52 ~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~------~~~a~~I~~a~~ev~~~~~~~~f~ 124 (439)
+-+|+..+.+..+.|+ |+.++++++.+|+|++.+++++| || ++++++|.++|+++..+ +
T Consensus 13 ~gRy~~~~~~~~~~fs--------d~~~i~~~~~ve~A~a~ala~~g~i~~ip~i~~~~a~~I~~~~~~i~~g------~ 78 (462)
T 2ptr_A 13 DGRYGDKVSALRGIFS--------EYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVASFSEE------D 78 (462)
T ss_dssp TTTTGGGSGGGGGTTS--------HHHHHHHHHHHHHHHHHHHHHCTTCTTSCCCCHHHHHHHHHHHHTCCHH------H
T ss_pred cccccCchHHHHHHCC--------cHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHhccC------C
Confidence 3355555444555574 78999999999999999999997 83 89999999999765332 3
Q ss_pred ccccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 013614 125 LVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNS-RLIPNLKVLHNS 203 (439)
Q Consensus 125 ~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~-~l~~~L~~L~~a 203 (439)
++.++++. +.+++++++++.++ .+++| +.|.. .|+++|||+||||||++||+++|++++.+ . .|.+.|..|+++
T Consensus 79 ~~~~~~~~-~~~~~dv~av~~~l-~e~~g-~~g~~-~~~~~~vH~g~SsnDv~~Ta~~L~lr~~l-~~~l~~~L~~L~~~ 153 (462)
T 2ptr_A 79 AARIKTIE-RTTNHDVKAVEYFL-KEKVA-EIPEL-HAVSEFIHFACTSEDINNLSHALMLKTAR-DEVILPYWRQLIDG 153 (462)
T ss_dssp HHHHHHHH-HHHSCHHHHHHHHH-HHHHT-TSHHH-HTTGGGTTTTCCHHHHHHHHHHHHHHHHH-HHTHHHHHHHHHHH
T ss_pred HHHHHhhc-cccCCCHHHHHHHH-HHHhc-cccCC-cchhhhccCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 45566665 77899998876554 68898 45544 68999999999999999999999998775 6 599999999999
Q ss_pred HHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcch----HHH
Q 013614 204 LHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFD----VKI 279 (439)
Q Consensus 204 L~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~----~~v 279 (439)
|.+||++|++++||||||+|||+|+||||||++|+++|.|+++||.+++ ..+++|| ||||+.+..+.|+ .++
T Consensus 154 L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~---~~~~~~G-AvGT~~~~~~~~~~~~~~~v 229 (462)
T 2ptr_A 154 LKDLAVQYRDIPLLSRTAGQPATPSTIGKEMANVAYRMERQYRQLNQVE---ILGKING-AVGNYNAHIAAYPEVDWHQF 229 (462)
T ss_dssp HHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC---CEECCCC-TTSSCHHHHHHCTTSCHHHH
T ss_pred HHHHHHHccCCEeeccccCeeceechHHHHHHHHHHHHHHHHHHHHHHH---HHhccCc-hhcchhhcccccCcccHHHH
Confidence 9999999999999999999999999999999999999999999999987 3566666 9999987776676 679
Q ss_pred HHHHHHHcCCCCccCCchhh-HhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCCCCC
Q 013614 280 ASAVAEETSLPFVTAENKFE-ALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKV 358 (439)
Q Consensus 280 ~~~la~~LGl~~~~~~n~~d-a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP~K~ 358 (439)
.+.+++.|||. +|+++ ++++||++++++++|+.++++|+|||+||++|+|+|+ |+| .+|++++|||||||||
T Consensus 230 ~~~~~~~LGl~----~n~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~s~~~--~~E-~~~~~~~GSSiMP~K~ 302 (462)
T 2ptr_A 230 SEEFVTSLGIQ----WNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNH--FKQ-KTIAGEIGSSTMPHKV 302 (462)
T ss_dssp HHHHHHHTTCE----ECCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--EEE-CCCTTCCSCSSCTTCC
T ss_pred HHHHHHHhCCC----CCchhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc--hhc-cCCCCCCcCCCCCCCC
Confidence 99999999994 67788 4899999999999999999999999999999999875 666 4667899999999999
Q ss_pred CchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 359 NPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 359 NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
||+.+|.++++|++++|+..+++.+...+++|+|.+.|.+.++++.++..+..++..+. .|++||+||++||+++++.+
T Consensus 303 NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~~~~~~~l~~~~~~~~~~l~~~~-~~l~gl~vn~e~m~~~l~~~ 381 (462)
T 2ptr_A 303 NPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTL-KGVSKLEVNRDHLLDELDHN 381 (462)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCTHHHHHGGGHHHHHHHHHHHHHHHH-HHHHHEEECHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHH-HHHCcCEECHHHHHHHHHcC
Confidence 99999999999999999999998876678999999999998999999999999999997 59999999999999999865
No 22
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=100.00 E-value=1.5e-69 Score=562.57 Aligned_cols=342 Identities=18% Similarity=0.172 Sum_probs=285.8
Q ss_pred ccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCccCCCCcccccccCC
Q 013614 54 LWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGS 132 (439)
Q Consensus 54 ~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G-i~~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~ 132 (439)
+|+.+.++.+ |+ ++.++++|++||.|++.++.+ | ||++.+++|.++++ |+...+....
T Consensus 4 ry~~~~m~~~--fs--------~~~~~~~~l~ve~Ala~a~~~-GlIp~~~~~~i~~~~~----------~d~~~i~~~e 62 (438)
T 4eei_A 4 RYDVAEISKI--WA--------DENKYAKMLEVELAILEALED-RMVPKGTAAEIRARAQ----------IRPERVDEIE 62 (438)
T ss_dssp GGCCHHHHHH--HS--------HHHHHHHHHHHHHHHHHHGGG-TTSCTTHHHHHHHHCC----------CCHHHHHHHH
T ss_pred ccCcHHHHHH--cC--------hHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHhhCC----------CCHHHHHHHH
Confidence 7899999999 73 789999999999999999999 9 99999999988741 1111110000
Q ss_pred CcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 013614 133 GTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFK 212 (439)
Q Consensus 133 g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~aL~~~A~~~~ 212 (439)
. .++.++.. +++.+.+.+|++.|+| ||+ |+||||+++|+++|++++.+ ..|.+.|..|+++|.++|++|+
T Consensus 63 ~-~~~hdV~a-~~~~l~e~~g~~~~~~-iH~------G~SsnDv~~Ta~~L~lr~~~-~~l~~~L~~l~~~L~~~A~~~~ 132 (438)
T 4eei_A 63 K-VTKHDIIA-FCTSIAEQFTAETGKF-FHF------GVTSSDIIDSALSLQIRDSM-SYVIKDLEALCDSLLTKAEETK 132 (438)
T ss_dssp H-HHSCHHHH-HHHHHHTTSCTTTTTT-TTC------SCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred H-hcCCCHHH-HHHHHHHHcCHHhhcc-cCC------CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhh
Confidence 0 01122332 4567888898554777 885 99999999999999998764 7999999999999999999999
Q ss_pred CcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCCCcchHHHHHHHHHHcCCCCc
Q 013614 213 DIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTKKGFDVKIASAVAEETSLPFV 292 (439)
Q Consensus 213 ~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~ 292 (439)
+++||||||+|||||+||||||++|+++|.|+++||++++++++.+|||| |+||+++++++ +.+.+++.|||+..
T Consensus 133 ~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgG-AvGT~~~~~~~----~~~~~a~~LG~~~~ 207 (438)
T 4eei_A 133 EIITMGRSHGMFAEPMSFGQKFLGAYVEFKRRLKDLKDFQKDGLTVQFSG-AVGNYCILTTE----DEKKAADILGLPVE 207 (438)
T ss_dssp TCEEEEEETTEEEEEEETHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCC-TTSCCSSSCHH----HHHHHHHHHTCCBC
T ss_pred CCcccccccCccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCcc-HhhCcccccHH----HHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999997 89999988654 55789999999864
Q ss_pred cCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcC--CCCcccCCCCCCCCchhhHHHHHHH
Q 013614 293 TAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIMPGKVNPTQCEALTMVC 370 (439)
Q Consensus 293 ~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp--~~~~GSSiMP~K~NP~~~E~i~~~a 370 (439)
+|+ +++++||++++++++|+.++++|+|||+||++|+ ++||||+.+| ++++|||||||||||+.+|.++++|
T Consensus 208 --~~~-~~v~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~---~~e~gel~~~f~~~q~GSSiMP~K~NP~~~E~i~~~a 281 (438)
T 4eei_A 208 --EVS-TQVIPRDRIAKLISIHGLIASAIERLAVEIRHLH---RSDVFEVYEGFSKGQKGSSTMPHKKNPISTENLTGMA 281 (438)
T ss_dssp --SSC-SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH---STTTCSEECCC------------CCCCHHHHHHHHHH
T ss_pred --Ccc-ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccceeccccccCCCCCCCCCCCCCcHHHHHHHHHH
Confidence 343 4678999999999999999999999999999999 5799999998 5799999999999999999999999
Q ss_pred HHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 371 AQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 371 ~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
++|+|+..+. +.....++|++...+...|++++++..+.+++..+..+|++||+||+++|+++++.+
T Consensus 282 ~~v~g~~~~~-~~~~~~~~erdl~~~~~er~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~ 348 (438)
T 4eei_A 282 RMLRSHVSIA-LENCVLWHERDISHSSAERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRST 348 (438)
T ss_dssp HHHHHHHHHH-HHTTCCCTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHC
T ss_pred HHHHHHHHHH-HhccchhcCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhc
Confidence 9999998665 335566789999888888999999999999999999999999999999999999853
No 23
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=100.00 E-value=3.1e-68 Score=561.35 Aligned_cols=360 Identities=16% Similarity=0.127 Sum_probs=306.3
Q ss_pred cccCCCCccccccCccChHhHHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHcC
Q 013614 40 EKDTFGPILVPSDKLWGAQTQRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG--LDPAIGKAIMQAAQEVAEG 117 (439)
Q Consensus 40 e~d~~g~~~~p~~~~~g~~t~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G--i~~~~a~~I~~a~~ev~~~ 117 (439)
+++.+.....|-+.+|+.+.++.+ |+ ++++++.|++++.|+|.+++++| ||++++++|.++++++
T Consensus 28 ~~~~~~~~~spl~~ry~~~~m~~~--fS--------~~~~~~~~~~~e~Ala~a~~~~Gl~i~~e~~~~I~~~l~~i--- 94 (503)
T 2j91_A 28 DHGSPDSYRSPLASRYASPEMCFV--FS--------DRYKFRTWRQLWLWLAEAEQTLGLPITDEQIREMKSNLENI--- 94 (503)
T ss_dssp CSCCTTSCCCHHHHTTSCHHHHHH--TS--------HHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTSSCC---
T ss_pred cccCcccccCCcccccCCHHHHHH--hC--------hhHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhhc---
Confidence 444577888899888988999999 73 67999999999999999999999 8999999998865432
Q ss_pred ccCCCCcccccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHH
Q 013614 118 KLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNL 197 (439)
Q Consensus 118 ~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L 197 (439)
..+...+.. ..++.+|+.+++ .+.+.+| +.|+| ||+ |+||||+.+|+..|++++.+ ..|.+.|
T Consensus 95 ------~~~~~~~~e-~~~~hDV~a~v~-~l~e~~g-~~~~~-iH~------G~TS~Di~dta~~L~lr~al-~~l~~~L 157 (503)
T 2j91_A 95 ------DFKMAAEEE-KRLRHDVMAHVH-TFGHCCP-KAAGI-IHL------GATSCYVGDNTDLIILRNAL-DLLLPKL 157 (503)
T ss_dssp ------CHHHHHHHH-HHHSCHHHHHHH-HHHHHCT-TTGGG-TTT------TCCTHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred ------CHHHHhhhh-hhcCCcHHHHHH-HHHHHhc-ccccc-ccC------CCCHhhHHHHHHHHHHHHHH-HHHHHHH
Confidence 222111110 122345555565 3678888 56777 886 99999999999999997765 7999999
Q ss_pred HHHHHHHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCC------CCC
Q 013614 198 KVLHNSLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG------LNT 271 (439)
Q Consensus 198 ~~L~~aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~------~~~ 271 (439)
..|+++|.++|++|++++||||||+|||+|+||||+|++|+++|.|+++||+++++++..+++|| ++||+ ++.
T Consensus 158 ~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~RL~~~~~~l~~lg~gG-~~GT~a~~~~~f~~ 236 (503)
T 2j91_A 158 ARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLCMDLQNLKRVRDDLRFRGVKG-TTGTQASFLQLFEG 236 (503)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCBCCSCC-TTSSCHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCcEeeccccCccceecchHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-cccchhhhccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988 58998 444
Q ss_pred CCcchHHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCC--CCc
Q 013614 272 KKGFDVKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPE--NEP 349 (439)
Q Consensus 272 ~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~--~~~ 349 (439)
|+....++.+.+++.|||+. +.+|+. ++++||++++++++|+.++++|+|||+||++|+| +|||.+|. +++
T Consensus 237 D~~~~~~v~~~~a~~LGl~~-~~~~s~-~~~~rd~~~e~~~~la~la~~L~kia~Dirll~s-----~~ei~ep~~~~q~ 309 (503)
T 2j91_A 237 DDHKVEQLDKMVTEKAGFKR-AFIITG-QTYTRKVDIEVLSVLASLGASVHKICTDIRLLAN-----LKEMEEPFEKQQI 309 (503)
T ss_dssp CHHHHHHHHHHHHHHTTCSC-BCSCCS-SSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTSEECCC-----
T ss_pred chHHHHHHHHHHHHHhCCCC-CCCccc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cceeeccccCCCC
Confidence 44335678899999999995 445554 6889999999999999999999999999999996 99999994 589
Q ss_pred ccCCCCCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHH
Q 013614 350 GSSIMPGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRE 429 (439)
Q Consensus 350 GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~e 429 (439)
|||||||||||+.+|.++++|++|+|+.++++.....++||+|...|.+.++.++++..+.+++..+..+|++||+||++
T Consensus 310 GSSiMP~K~NPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~s~~~~~~l~~~~~~~~~~l~~~~~~l~gL~vn~e 389 (503)
T 2j91_A 310 GSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISEGLVVYPK 389 (503)
T ss_dssp ------CCCCCHHHHHHHHHHHHHHHTTHHHHHHHHTCCTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCEECHH
T ss_pred CCCCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHccCcccccccchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHH
Confidence 99999999999999999999999999999888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 013614 430 RISKLLHE 437 (439)
Q Consensus 430 rm~~~l~~ 437 (439)
+|+++++.
T Consensus 390 rm~~~l~~ 397 (503)
T 2j91_A 390 VIERRIRQ 397 (503)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999986
No 24
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=100.00 E-value=5.2e-68 Score=557.55 Aligned_cols=353 Identities=15% Similarity=0.146 Sum_probs=297.0
Q ss_pred ccccccCccChHh-HHHhhcCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHcCccCCC
Q 013614 47 ILVPSDKLWGAQT-QRSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG---LDPAIGKAIMQAAQEVAEGKLNDH 122 (439)
Q Consensus 47 ~~~p~~~~~g~~t-~rai~~f~~~~~~~~~~~~~i~a~~~v~~A~A~a~~~~G---i~~~~a~~I~~a~~ev~~~~~~~~ 122 (439)
...|-+-+|+.+. ++.+ |+ +.+.++.|++++.|++.++.++| ||++++++|.++++++.
T Consensus 7 ~~spl~~ry~~~~~m~~~--fs--------~~~~~~~~~~~e~Ala~a~~~~Gl~~i~~~~~~~I~~~l~~i~------- 69 (478)
T 1yis_A 7 FESVLSTRYCKNSPLVSI--LS--------ETNKATLWRQLWIWLAEAEKELGLKQVTQDAIDEMKSNRDVFD------- 69 (478)
T ss_dssp CCCHHHHTTTTTCTHHHH--TS--------HHHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHTTTCCC-------
T ss_pred CCCCcccccCChHHHHHH--cC--------chHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhCC-------
Confidence 4556665676666 8888 73 67899999999999999999999 58999999998765432
Q ss_pred CcccccccCCCcccccchhHHHHHHHHHHhCcccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013614 123 FPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHN 202 (439)
Q Consensus 123 f~~~~~~~~~g~~~~~~~nevi~~~~~e~lg~~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~~l~~~L~~L~~ 202 (439)
.+...+.. ...+.+++.+++ .+.+.+| +.|+| ||+ |+||||+.+|+..|++++.+ ..|.+.|..|++
T Consensus 70 --~~~~~~~e-~~~~~DV~a~v~-~l~e~~g-~~~~~-iH~------G~TS~Di~~ta~~L~lr~~l-~~l~~~L~~L~~ 136 (478)
T 1yis_A 70 --WPFIRSEE-RKLKHDVMAHNH-AFGKLCP-TAAGI-IHL------GATSCFVQDNADLIAYRDSI-DHILKRFATVID 136 (478)
T ss_dssp --HHHHHHHH-HHSSCHHHHHHH-HHHHHCT-TTGGG-TTT------TCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred --HHHHhhHH-HhcCCcHHHHHH-HHHHhhh-hchhh-eeC------CCchhhhHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 11111100 112334555565 3688888 56777 886 99999999999999997775 799999999999
Q ss_pred HHHHHHHHccCcceeccccccCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCC------CCCCCcch
Q 013614 203 SLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTG------LNTKKGFD 276 (439)
Q Consensus 203 aL~~~A~~~~~~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~------~~~~~~~~ 276 (439)
+|.++|++|++++||||||+|||||+||||||++|+++|.|+++||.++++++..+++|| ++||+ ++.++...
T Consensus 137 ~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~rd~~rL~~~~~~l~~lg~gg-~~GT~a~~~~~f~~d~~~~ 215 (478)
T 1yis_A 137 RLAAFSLKNKEVVTVGRTHYQTASLVTVGKRGVLWAQELLMAFQSLSEFRDKMRFRGIKG-ATGTQDSFLTLFAGDESKV 215 (478)
T ss_dssp HHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCBCCSCT-TTSSCHHHHHHTTTCHHHH
T ss_pred HHHHHHHHcCCCeeecccCCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhccchhhhcccCcchhhH
Confidence 999999999999999999999999999999999999999999999999999999999988 57999 55554445
Q ss_pred HHHHHHHHHHcCCCCccCCchhhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcC--CCCcccCCC
Q 013614 277 VKIASAVAEETSLPFVTAENKFEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILP--ENEPGSSIM 354 (439)
Q Consensus 277 ~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp--~~~~GSSiM 354 (439)
.++.+.+++.|||+. +.+|+. ++++||+++|++++|+.++++|+|||+||++|+| +||+.+| ++++|||||
T Consensus 216 ~~v~~~~a~~LG~~~-~~~~s~-~~~~rd~~~e~~~~l~~~a~~L~kia~Di~ll~s-----~~el~~p~~~~q~GSSiM 288 (478)
T 1yis_A 216 EALDELVTKKANFSN-RFLITG-QTYSRQQDSQLVFSLSLLGAAAKKVCTDIRVLQA-----FGELLEPFEKDQIGSSAM 288 (478)
T ss_dssp HHHHHHHHHHTTCSC-BCSSCS-SSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTSEECC-----------
T ss_pred HHHHHHHHHHhCcCC-CCCccc-cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhheeccccCCCCccccC
Confidence 678899999999995 445554 6889999999999999999999999999999997 8999999 469999999
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhhHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHH
Q 013614 355 PGKVNPTQCEALTMVCAQVIGNHVAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKL 434 (439)
Q Consensus 355 P~K~NP~~~E~i~~~a~~v~G~~~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~ 434 (439)
||||||+.+|.++++|++|+|+.++++.....++||+|...|.+.++.++++..+.+++..+..+|++||+||++||+++
T Consensus 289 P~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~er~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~ 368 (478)
T 1yis_A 289 PYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDDSAGRRMLIPDVLLTAEALLTTLQNIFEGLSVQTDNVKKI 368 (478)
T ss_dssp --CCCCHHHHHHHHHHHHHHTSHHHHHHHHHTCCTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHhHHHHHHHhccCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHH
Confidence 99999999999999999999999988888888899999999999999999999999999999999999999999999999
Q ss_pred Hhh
Q 013614 435 LHE 437 (439)
Q Consensus 435 l~~ 437 (439)
++.
T Consensus 369 l~~ 371 (478)
T 1yis_A 369 VED 371 (478)
T ss_dssp HHH
T ss_pred HHh
Confidence 986
No 25
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=100.00 E-value=4.9e-62 Score=509.65 Aligned_cols=335 Identities=17% Similarity=0.140 Sum_probs=265.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcC-CC------HHHHHHHHHHHHHHHcCccCCCCcccccccCCCcccccchhHHHHHHH
Q 013614 76 PEPIVRAFGILKKCAAKVNMEYG-LD------PAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRA 148 (439)
Q Consensus 76 ~~~~i~a~~~v~~A~A~a~~~~G-i~------~~~a~~I~~a~~ev~~~~~~~~f~~~~~~~~~g~~~~~~~nevi~~~~ 148 (439)
|+.++++++.++.|++.++++.| || ++++++|.++++++..+. |. ...+.. ..++.++ ..++..+
T Consensus 32 d~~~~~~~l~ve~a~~~ala~~~gi~~ip~i~~~~~~~i~~~~~~~~~~d----~~--~~~~~e-~~~~~Dv-~a~e~~l 103 (459)
T 3bhg_A 32 EFALTYYRLMVEIKWFESLAANDTIPEVPALDNKARKFLSDLISNFNESE----AE--KIKEFE-KQTNHDV-KAVEYYL 103 (459)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTCTTSCCCCHHHHHHHHHHHHTCCHHH----HH--HHHHHT-TTCSSHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhcccc----HH--HHHHHH-HhcCCCh-HHHHHHH
Confidence 68999999999999999999995 73 799999999886542110 11 110000 1112334 3467888
Q ss_pred HHHhCc-----ccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCcceeccccc
Q 013614 149 AEILGH-----KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNS-RLIPNLKVLHNSLHSKSVEFKDIVKIGRTHT 222 (439)
Q Consensus 149 ~e~lg~-----~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~-~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~ 222 (439)
.+++|. +.|+| || +|||||||++|+++|++++.+ . .|.+.|..|+++|.++|++|++++||||||+
T Consensus 104 ~e~~g~~~~~~~~~~~-iH------~g~SsnDv~~Ta~~L~lr~~l-~~~l~~~L~~l~~~L~~~A~~~~~~~m~GrTHl 175 (459)
T 3bhg_A 104 QDKFQENEQLKSCVAF-IH------FACTSEDINNLAYALMIKQAI-AQVIQPTIAEIMGSITLLGKQHADVAMLSRTHG 175 (459)
T ss_dssp HHHHTTSTTGGGGGGG-TT------TTCCHHHHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred HHHhcccccCchhhhh-hc------CCCCHHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccCCEeeccccC
Confidence 899982 34455 66 599999999999999998765 5 6999999999999999999999999999999
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC----Ccch-HHHHHHHHHHcCCCCccCCch
Q 013614 223 QDATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK----KGFD-VKIASAVAEETSLPFVTAENK 297 (439)
Q Consensus 223 Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~----~~~~-~~v~~~la~~LGl~~~~~~n~ 297 (439)
|||||+||||||++|+++|.|+++||++++ .+++||||+|| ++.+ ++.+ ..+.+.+++.|||+..+.++
T Consensus 176 Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~----~~~~~~GAvGT-~~a~~~~~~~~~~~~~~~~~~~~LGl~~~~~~~- 249 (459)
T 3bhg_A 176 QPATPTTMGKELVNFVARLKRPQQQLAEVL----IPAKFNGAVGN-YNAHVAAYPEVDWRKHCANFVTSLGLSFNAYTT- 249 (459)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHHHHCC----CEECCCCSSSS-CHHHHHHCTTSCHHHHHHHHHHHTTCEECSSCS-
T ss_pred ccceechHHHHHHHHHHHHHHHHHHHHHHH----Hhhcccccccc-ccccccccCcccHHHHHHHHHHHhCCCCCcccc-
Confidence 999999999999999999999999999876 47778889999 5533 2111 35778888889998654443
Q ss_pred hhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCCCCCCchhhHHHHHHHHHHhhhh
Q 013614 298 FEALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNH 377 (439)
Q Consensus 298 ~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~ 377 (439)
++++||+++|++++|+.++++|+|||+||++|+|+ |+.+..+|++++|||||||||||+.+|.+++.+..+.|..
T Consensus 250 --~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~---~~~~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~l~~~~~ 324 (459)
T 3bhg_A 250 --QIEPHDGIAEVSQIMVRINNILLDYTQDIWSYISL---GYFKQKTIAEEVGSSTMPHKVNPIDFENAEGNLGLSNALF 324 (459)
T ss_dssp --SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TSEEECC------CCSSCCCCCTHHHHHHHHHHHHHHHHH
T ss_pred --chhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---cceehccCCCCCCCCCCCCCcChHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999984 5644445667999999999999999999999999999987
Q ss_pred hHHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 378 VAITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 378 ~~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
..+.......+++++...+...++++..+.....++..+. .|++||+||++||+++++.+
T Consensus 325 ~~~~~~l~~~~~~rdl~~s~~~r~l~~~~~~~~~~l~~~~-~~l~gl~vn~e~m~~~l~~~ 384 (459)
T 3bhg_A 325 IHFANKLTQSRMQRDLSDSTVLRNLGVAFSYSLIAYHSVA-KGNDKLQINKSALQKDLSEN 384 (459)
T ss_dssp HHHHHHTTCCSTTCCTHHHHHHTTHHHHHHHHHHHHHHHH-HHHTTEEECHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcccchhhhhhhhHHHHHHHHHHHHHHHH-HHHCcCEECHHHHHHHHHcC
Confidence 7776644455677877666555667778887777777774 69999999999999999865
No 26
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=100.00 E-value=1.9e-62 Score=513.45 Aligned_cols=337 Identities=19% Similarity=0.188 Sum_probs=264.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHc-C-CCHHHHHHHHHHHHHHHcCccCCCCc-ccccccCCCcccccchhHHHHHHHHHHh
Q 013614 76 PEPIVRAFGILKKCAAKVNMEY-G-LDPAIGKAIMQAAQEVAEGKLNDHFP-LVVWQTGSGTQSNMNANEVIANRAAEIL 152 (439)
Q Consensus 76 ~~~~i~a~~~v~~A~A~a~~~~-G-i~~~~a~~I~~a~~ev~~~~~~~~f~-~~~~~~~~g~~~~~~~nevi~~~~~e~l 152 (439)
|..++++++.++.|++.++++. | ||++.+++|.+ +.++.+....+.+. +..+....++| + -.++..+.+++
T Consensus 28 d~~~~~~~i~ve~A~~~ala~~~gii~~~~~~~i~~-l~~~~~~~~~~d~~~i~~~e~~~~hD----V-~a~e~~l~e~~ 101 (465)
T 2qga_B 28 EHALIKHRIIVEVRWLLFLNEEELFFEKVTDHSVEV-LNQIATNITDSDIARVKAIEEETNHD----V-KAVEYFVKEKL 101 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSCCCCHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHSCH----H-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH-HHHHHHhhccccHHHHHHHhhccCCC----h-HHHHHHHHHHh
Confidence 6899999999999999999999 9 99999999875 33332210000010 00111112333 3 33677888988
Q ss_pred Cc-------ccCCcccccccccCCCCChhcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCcceeccccccC
Q 013614 153 GH-------KRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNS-RLIPNLKVLHNSLHSKSVEFKDIVKIGRTHTQD 224 (439)
Q Consensus 153 g~-------~~g~~~vH~~~hvn~g~SsnD~~~Ta~~l~~~~~~~~-~l~~~L~~L~~aL~~~A~~~~~~~~~GrTH~Q~ 224 (439)
|. +.|+| || +|+|||||++|+++|++++.+ . .|.+.|..|+++|.++|++|++++||||||+||
T Consensus 102 g~~~~~~~~~~~~~-iH------~g~SsnDv~~Ta~~L~lr~~l-~~~l~~~L~~l~~~L~~~A~~~~~~~m~GrTHlQ~ 173 (465)
T 2qga_B 102 KNSKREDLLKIKEY-VH------YLCTSEDINNVAYATCLKACL-NDVVIPCLEKIMLKLKDLAVEYSHVPLLSRTHGQP 173 (465)
T ss_dssp HTSCCHHHHHHGGG-TT------TTCCHHHHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEE
T ss_pred cccccccchhhhhh-cc------CCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccCcEeeccccCcc
Confidence 72 45666 77 499999999999999998765 5 799999999999999999999999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCccccccCCCCCC----Ccch-HHHHHHHHHH-cCCCCccCCchh
Q 013614 225 ATPLTLGQEFSGYTTQVKYGIDRVICCLPRMYQLAQGGTAVGTGLNTK----KGFD-VKIASAVAEE-TSLPFVTAENKF 298 (439)
Q Consensus 225 A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGg~AvGT~~~~~----~~~~-~~v~~~la~~-LGl~~~~~~n~~ 298 (439)
|||+||||||++|+++|.|+++||++++ .+++||||+|| ++.+ |+.+ ..+.+.+++. |||+.++.+
T Consensus 174 A~P~T~G~~~~~~~~~l~r~~~rL~~~~----~~~~~~GAvGT-~~a~~~~~p~~d~~~~~~~~~~~~LGl~~~~~~--- 245 (465)
T 2qga_B 174 ASSTTFGKEMANFYARIHHHVGVIRRVK----VCAKFNGAVGN-FNAHKVASKDTDWVNTIGLFLKKHFNLTYSIYC--- 245 (465)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHHSC----CEECCCCTTSS-CHHHHHHCTTCCHHHHHHHHHHHHHCCEECCCC---
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHH----HhccccchhcC-ccccccccCcccHHHHHHHHHHHHhCCCCCCCc---
Confidence 9999999999999999999999998876 68888889999 5432 2222 2455566665 999976544
Q ss_pred hHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccceEEcCCCCcccCCCCCCCCchhhHHHHHHHHHHhhhhh
Q 013614 299 EALAAHDAFVETSGALNTVAASLMKIANDVRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVIGNHV 378 (439)
Q Consensus 299 da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gev~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~ 378 (439)
+++++||++++++++|+.++++|+|||+||++|+|+ |+.+..+|++++|||||||||||+.+|.+++.+..+.|...
T Consensus 246 ~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~---~~~~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~~~~~~~~ 322 (465)
T 2qga_B 246 TQIQDHDYICELCDGLARANGTLIDLCVDIWLYISN---NLLKLKVKEKEVGSSTMPHKVNPIDFENAEGNLHIANAFFK 322 (465)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TSEEEC-------CCSCTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred cchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---cceeeeCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999984 56555566789999999999999999999999999999888
Q ss_pred HHHHhccccccccccchhhHHHhHHHHHHHHHHHHHHHHHhhhhcceeCHHHHHHHHhhc
Q 013614 379 AITVGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHEV 438 (439)
Q Consensus 379 ~i~~~~~~~~~e~n~~~~~~~~~ll~~~~~l~~~~~~~~~~~l~gl~vn~erm~~~l~~~ 438 (439)
.+.......+++++...+...++++..+.....++..+. .|++||+||+++|+++++.+
T Consensus 323 ~~~~~l~~~~~erdl~~s~~~r~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~ 381 (465)
T 2qga_B 323 LFSSKLPTSRLQRDLSDSTVLRNIGSSLAYCLIAYKSVL-KGLNKIDIDRRNLEEELNQN 381 (465)
T ss_dssp HHHHHTTCCSTTBCTHHHHHHTTHHHHHHHHHHHHHHHH-HHHHHEEECHHHHHHHHHTC
T ss_pred HHHHhhcchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH-HHHccCEECHHHHHHHHHcC
Confidence 776655456778877776556667777777777777774 59999999999999999864
No 27
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=22.65 E-value=1.4e+02 Score=21.48 Aligned_cols=18 Identities=22% Similarity=0.342 Sum_probs=15.8
Q ss_pred CCHHHHHHHHHHHHHHHc
Q 013614 99 LDPAIGKAIMQAAQEVAE 116 (439)
Q Consensus 99 i~~~~a~~I~~a~~ev~~ 116 (439)
++++.+++|.+++++..+
T Consensus 5 lt~eq~~aILkaLdeaIe 22 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIE 22 (57)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 788999999999998654
Done!