BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013616
(439 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297742324|emb|CBI34473.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/431 (84%), Positives = 394/431 (91%), Gaps = 1/431 (0%)
Query: 10 NVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYL 69
N +PDGFN NYLKVYYG+LFPH+D+FKWMSYGNDG+HPACD+SY GRREFSFTL +DIYL
Sbjct: 17 NAVPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSYIGRREFSFTLADDIYL 76
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
RFQSFNS E+ENSIKEKCP KIDIGPVYSVDP KRHAYAQ GDNVF PVEREL+FDIDI
Sbjct: 77 RFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVERELVFDIDI 136
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
TDYDDVRYCCSGADVCL+CWPLMTVAIKVIDTALRDDFGF+HILWVYSGRRGVHCWVCDG
Sbjct: 137 TDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRGVHCWVCDG 196
Query: 190 KARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLS 248
+ARRL+NEQR AIADYFRVYKGNENS KKVS GP LHPFL RSYTEVL++FFEEKLL
Sbjct: 197 RARRLSNEQRAAIADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDFFEEKLLPG 256
Query: 249 QNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQ 308
Q LFSTEERYEKIL +IPDES+TSELRGKWQENRRSS SKEDIN RWEQLK+ LQSGKQ
Sbjct: 257 QKLFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIRWEQLKHMLQSGKQ 316
Query: 309 KVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
K QGLRRCVEEIVF++TYPRLDMEVSKH NHLLKAPFCVHPKTGRVC+PIDPK CEEFDP
Sbjct: 317 KAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEFDP 376
Query: 369 TTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
T+VPTLS+LL ELN G R D D+EWE+TSLGKS++FFR SFLQPLLKSCKEE+ES Y A
Sbjct: 377 TSVPTLSKLLEELNMGGFRADADDEWERTSLGKSVKFFRLSFLQPLLKSCKEEIESAYNA 436
Query: 429 KIQQTKNSLSW 439
K+Q +KNSLSW
Sbjct: 437 KLQLSKNSLSW 447
>gi|359473913|ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
Length = 457
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/431 (84%), Positives = 394/431 (91%), Gaps = 1/431 (0%)
Query: 10 NVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYL 69
N +PDGFN NYLKVYYG+LFPH+D+FKWMSYGNDG+HPACD+SY GRREFSFTL +DIYL
Sbjct: 27 NAVPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSYIGRREFSFTLADDIYL 86
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
RFQSFNS E+ENSIKEKCP KIDIGPVYSVDP KRHAYAQ GDNVF PVEREL+FDIDI
Sbjct: 87 RFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVERELVFDIDI 146
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
TDYDDVRYCCSGADVCL+CWPLMTVAIKVIDTALRDDFGF+HILWVYSGRRGVHCWVCDG
Sbjct: 147 TDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRGVHCWVCDG 206
Query: 190 KARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLS 248
+ARRL+NEQR AIADYFRVYKGNENS KKVS GP LHPFL RSYTEVL++FFEEKLL
Sbjct: 207 RARRLSNEQRAAIADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDFFEEKLLPG 266
Query: 249 QNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQ 308
Q LFSTEERYEKIL +IPDES+TSELRGKWQENRRSS SKEDIN RWEQLK+ LQSGKQ
Sbjct: 267 QKLFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIRWEQLKHMLQSGKQ 326
Query: 309 KVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
K QGLRRCVEEIVF++TYPRLDMEVSKH NHLLKAPFCVHPKTGRVC+PIDPK CEEFDP
Sbjct: 327 KAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEFDP 386
Query: 369 TTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
T+VPTLS+LL ELN G R D D+EWE+TSLGKS++FFR SFLQPLLKSCKEE+ES Y A
Sbjct: 387 TSVPTLSKLLEELNMGGFRADADDEWERTSLGKSVKFFRLSFLQPLLKSCKEEIESAYNA 446
Query: 429 KIQQTKNSLSW 439
K+Q +KNSLSW
Sbjct: 447 KLQLSKNSLSW 457
>gi|449447727|ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [Cucumis sativus]
gi|449517297|ref|XP_004165682.1| PREDICTED: DNA primase small subunit-like [Cucumis sativus]
Length = 450
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/442 (76%), Positives = 391/442 (88%), Gaps = 7/442 (1%)
Query: 1 MLIDGPKQG--NVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRRE 58
M+IDG +Q N + DGF+ NYLK+YYG+LFP+AD FKWMSYGNDG+HP D+SYFGRRE
Sbjct: 13 MVIDGNEQKPKNTVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKHPGSDQSYFGRRE 72
Query: 59 FSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAP 118
FSFTLDNDIYLRFQSFN+ SE+E SIKEKCP KIDIGPVYSVDPAKRHAYA DNVF P
Sbjct: 73 FSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVDPAKRHAYAD--DNVFTP 130
Query: 119 VERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSG 178
VEREL+FDID+TDYDDVRYCCSGADVCL+CWPLMT AIKVI T LRDDFGF+HILWV+SG
Sbjct: 131 VERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIHTTLRDDFGFNHILWVFSG 190
Query: 179 RRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVL 237
RRGVHCWVCDGKARRL+NEQR AIA+YF +Y+GNENS KK+S GP LHPFLVRSYTEVL
Sbjct: 191 RRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLVRSYTEVL 250
Query: 238 REFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWE 297
++ FE +LL SQ +FSTEERYEKIL MIPDES+TS+LRG+WQ+NRRSS K D+N RWE
Sbjct: 251 KDSFESQLLCSQKIFSTEERYEKILDMIPDESITSDLRGRWQDNRRSS--KNDVNSLRWE 308
Query: 298 QLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIP 357
QLK+ LQSGK K QG+RR VEEIVF+FTYPRLD EV+KH NHLLKAPFCVHPKTGR+C+P
Sbjct: 309 QLKSLLQSGKHKAQGMRRHVEEIVFSFTYPRLDSEVTKHMNHLLKAPFCVHPKTGRICVP 368
Query: 358 IDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKS 417
IDP+ C+EFDPTTVPT+++LL ELN D +D +N+W++TSLG+SIRFFRS+FLQPLLKS
Sbjct: 369 IDPEHCDEFDPTTVPTVAQLLEELNAADMEVDSENDWDRTSLGESIRFFRSAFLQPLLKS 428
Query: 418 CKEEMESGYKAKIQQTKNSLSW 439
CKEE+ES Y AK+QQ+KNSLSW
Sbjct: 429 CKEEIESSYNAKVQQSKNSLSW 450
>gi|255549615|ref|XP_002515859.1| DNA primase, putative [Ricinus communis]
gi|223545014|gb|EEF46528.1| DNA primase, putative [Ricinus communis]
Length = 515
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/420 (80%), Positives = 376/420 (89%), Gaps = 4/420 (0%)
Query: 1 MLIDGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
MLID N + + FNPNYLK+YYG+LFPHA+IFKWM YGNDG+HPACDKSYFGRREFS
Sbjct: 11 MLIDA----NAVSNEFNPNYLKLYYGKLFPHAEIFKWMCYGNDGKHPACDKSYFGRREFS 66
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTLDNDIYLRFQSFN+ES+L+ SIK+KCP KIDIGPVY+VDPAKRHAY+Q GDNVF PVE
Sbjct: 67 FTLDNDIYLRFQSFNNESQLKTSIKDKCPFKIDIGPVYTVDPAKRHAYSQSGDNVFTPVE 126
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
RELIFDID++DYD+VRYCCSGADVCL+CWPLMT+AIKVI++ALRDDFGF+HILWVYSGRR
Sbjct: 127 RELIFDIDMSDYDNVRYCCSGADVCLDCWPLMTIAIKVINSALRDDFGFNHILWVYSGRR 186
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREF 240
GVHCWVCDGKARRLTNEQR AI DY RVYKGNENSNK VS GPLHPFLVRSY EVL++F
Sbjct: 187 GVHCWVCDGKARRLTNEQRAAIVDYLRVYKGNENSNKMVSLTGPLHPFLVRSYAEVLKDF 246
Query: 241 FEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLK 300
FE KLL SQ +FSTEERYEKIL MIPDESVTSELRGKWQ +++S+SKE +N RWEQLK
Sbjct: 247 FETKLLSSQEIFSTEERYEKILEMIPDESVTSELRGKWQNTKQTSSSKEGVNLVRWEQLK 306
Query: 301 NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP 360
TLQSG +K GLR+CVEEIVF+FTYPRLD+EVSKH NHLLKAPFC+HPKTGRVC+PIDP
Sbjct: 307 RTLQSGTKKAPGLRKCVEEIVFSFTYPRLDVEVSKHMNHLLKAPFCIHPKTGRVCVPIDP 366
Query: 361 KDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
K C+EFDPT VPTLS+LL+ELN G R DN+ ++TSLGKSI FFRSSFLQPLLKSCKE
Sbjct: 367 KHCDEFDPTAVPTLSQLLKELNMGGPRASDDNDVDRTSLGKSISFFRSSFLQPLLKSCKE 426
>gi|356501475|ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [Glycine max]
Length = 434
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/429 (78%), Positives = 375/429 (87%), Gaps = 3/429 (0%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
PD FN N+LK+YYG+LFP AD+ +W+SYGNDG+HP CD+SY GRREFSFTL+NDIYLRFQ
Sbjct: 7 PD-FNLNHLKLYYGKLFPFADLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDIYLRFQ 65
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN-VFAPVERELIFDIDITD 131
SF++ ELENSIKEK P KIDIGPVY+VDPAKR+AYAQ GDN VFAPVERELIFDID++D
Sbjct: 66 SFHNALELENSIKEKTPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSD 125
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YDDVRYCCSGADVCL CWPLMT+AIKVIDTALRDDFGF HILWVYSGRRGVHCWVCDGKA
Sbjct: 126 YDDVRYCCSGADVCLVCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKA 185
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQN 250
RRLTNEQRGAIADYFRVYKGNENS+KKVS G LHPFL SYT VL+ +FE+ LL QN
Sbjct: 186 RRLTNEQRGAIADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKNYFEKNLLTGQN 245
Query: 251 LFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
L +TEERYEKIL MIPDES+ SELRG+WQ++RRSS++KEDIN RWEQ K LQSGK K
Sbjct: 246 LLATEERYEKILDMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKA 305
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
QGLRRC+EEIVF FTYPRLDMEVSKH NHLLKAPFCVHPKTGRVC+PIDPK CEEFDPTT
Sbjct: 306 QGLRRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTT 365
Query: 371 VPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKI 430
VPTLS+L+ ELN SR D D E +TSLG +I FRSSFLQPLLK+CKEE+E+ Y K+
Sbjct: 366 VPTLSQLIEELNYEGSRADADGESNRTSLGNAITLFRSSFLQPLLKACKEEIENSYNLKL 425
Query: 431 QQTKNSLSW 439
QQ+KNSL W
Sbjct: 426 QQSKNSLGW 434
>gi|357142240|ref|XP_003572504.1| PREDICTED: DNA primase small subunit-like [Brachypodium distachyon]
Length = 450
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/444 (73%), Positives = 385/444 (86%), Gaps = 5/444 (1%)
Query: 1 MLIDGPKQ----GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGR 56
M IDG +Q +P+GFN +YL++YYG+LFP+ D FKW+SYGND +HP CD+SY GR
Sbjct: 7 MEIDGQQQQREVAAAVPEGFNADYLRIYYGKLFPYGDFFKWLSYGNDAKHPGCDQSYIGR 66
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
RE SFTL+NDIYLRFQSF+S +ELE+SIKEKCP KIDIGPVYSVDPAKRHAYAQ G+NVF
Sbjct: 67 RELSFTLENDIYLRFQSFDSAAELESSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVF 126
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVY 176
APVERELIFDIDI+DYDDVRYCCSGAD C++CWPLMT+ IK++DT+LR DFGF+HILWVY
Sbjct: 127 APVERELIFDIDISDYDDVRYCCSGADTCVDCWPLMTIVIKILDTSLRGDFGFNHILWVY 186
Query: 177 SGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTE 235
SGRRGVHCWVCD +AR+L+NEQR AIADYFRVYKG EN++KKVS GP LHPFL RSYT+
Sbjct: 187 SGRRGVHCWVCDSRARKLSNEQRSAIADYFRVYKGGENTSKKVSLTGPVLHPFLARSYTD 246
Query: 236 VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
VL+ FFE+KLL SQ LFS+EER KIL +IPDE+V SEL KWQ NRRSS SKED+N R
Sbjct: 247 VLKCFFEDKLLHSQQLFSSEERCNKILELIPDENVASELHDKWQGNRRSSISKEDVNAAR 306
Query: 296 WEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
WEQLK TLQSGK K QGLRRCVEEIVF++TYPRLDMEVSKH NHLLKAPFC+HPKTGRVC
Sbjct: 307 WEQLKTTLQSGKHKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVC 366
Query: 356 IPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLL 415
+PIDP +C++FDP VPTLS+LL ELN ++D +++WE+TSL KSIRFFR+SFLQP+L
Sbjct: 367 VPIDPNNCDDFDPAAVPTLSQLLGELNAAGMQIDSESDWERTSLEKSIRFFRTSFLQPML 426
Query: 416 KSCKEEMESGYKAKIQQTKNSLSW 439
K+CK E+E+ Y AK++Q+KN+L+W
Sbjct: 427 KACKVELENAYNAKLEQSKNALNW 450
>gi|356553659|ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase small subunit-like
[Glycine max]
Length = 435
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/430 (78%), Positives = 377/430 (87%), Gaps = 4/430 (0%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
PD FN N+LK+YYG+LFP D+ +W+SYGNDG+HP CD+SY GRREFSFTL+NDIYLRFQ
Sbjct: 7 PD-FNLNHLKLYYGKLFPFVDLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDIYLRFQ 65
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN-VFAPVERELIFDIDITD 131
SF++ ELENSIKEKCP KIDIGPVY+VDPAKR+AYAQ GDN VFAPVERELIFDID++D
Sbjct: 66 SFHNAHELENSIKEKCPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSD 125
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YDDVRYCCSGADVCL CWPLMT AIKVIDTALRDDFGF HILWVYSGRRGVHCWVCDGKA
Sbjct: 126 YDDVRYCCSGADVCLVCWPLMTTAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKA 185
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQN 250
RRLTNEQRGAIADYFRVYKGNENS+KKVS G LHPFL SYT VL+++FE+ LL QN
Sbjct: 186 RRLTNEQRGAIADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDYFEKNLLTGQN 245
Query: 251 LFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
L +TEERYEKIL MIPDES+ SELRG+WQ++RRSS++KEDIN RWEQ K LQSGK K
Sbjct: 246 LLATEERYEKILGMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKA 305
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
QGLRRC+EEIVF FTYPRLDMEVSKH NHLLKAPFCVHPKTGRVC+PIDPK CEEFDPTT
Sbjct: 306 QGLRRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTT 365
Query: 371 VPTLSELLRELNTGDSRMDVDN-EWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAK 429
VPTLS+L+ ELN SR DVD E+ +T+LG +I FR SFLQPLLK+CKEE+E+ Y K
Sbjct: 366 VPTLSQLIEELNYEGSRADVDGAEFNRTTLGNAITLFRLSFLQPLLKACKEEIENSYYLK 425
Query: 430 IQQTKNSLSW 439
+QQ+KNSL+W
Sbjct: 426 LQQSKNSLAW 435
>gi|226492225|ref|NP_001143441.1| uncharacterized protein LOC100276095 [Zea mays]
gi|195620552|gb|ACG32106.1| hypothetical protein [Zea mays]
Length = 453
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/443 (74%), Positives = 381/443 (86%), Gaps = 7/443 (1%)
Query: 1 MLIDGPKQGNV-----IPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFG 55
M ID KQ + +P+GFN +YL+VYYG+LFP+ D FKW+ YGNDG+HP CD+SY G
Sbjct: 8 MEIDDQKQQQLEVTAAVPEGFNTDYLRVYYGKLFPYGDFFKWLCYGNDGKHPGCDQSYVG 67
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
RREFSFTL+NDIYLRFQSF++ +ELE+SIKEKCP KIDIGPVYSVDP+KRHAYAQ G+NV
Sbjct: 68 RREFSFTLENDIYLRFQSFDTATELESSIKEKCPFKIDIGPVYSVDPSKRHAYAQSGNNV 127
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWV 175
F PVERELIFDIDI+DYDDVRYCCSGADVC +CWPLMT+AIK++DT+LRDDFGF HILWV
Sbjct: 128 FVPVERELIFDIDISDYDDVRYCCSGADVCRDCWPLMTIAIKILDTSLRDDFGFSHILWV 187
Query: 176 YSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYT 234
YSGRRGVHCWVCD +AR+L+NEQR AIADYFRVYKG EN+ KKVS GP LHPFL RSY
Sbjct: 188 YSGRRGVHCWVCDSRARKLSNEQRAAIADYFRVYKGGENALKKVSLAGPVLHPFLARSYM 247
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
+VL+ FFE++LLL+Q LF++EER KIL +IPDESV SE+ KWQ NRRSS SKED+N
Sbjct: 248 DVLKTFFEDRLLLNQQLFASEERCRKILDLIPDESVASEVHDKWQGNRRSSISKEDVNAT 307
Query: 295 RWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
RWEQLK TLQSGK K QGLRRCVEEIVF++TYPRLDMEVSKH NHLLKAPFC+HPKTGRV
Sbjct: 308 RWEQLKMTLQSGK-KAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRV 366
Query: 355 CIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPL 414
C+PIDP +C++FDP VPTLS+LL ELN + D +N WE+TSLGKSI FFR+SFL PL
Sbjct: 367 CVPIDPSNCDDFDPAAVPTLSQLLGELNATGFQTDPENNWERTSLGKSISFFRTSFLHPL 426
Query: 415 LKSCKEEMESGYKAKIQQTKNSL 437
LK+CKEE+ES Y AK+QQ+KNSL
Sbjct: 427 LKACKEELESAYSAKLQQSKNSL 449
>gi|357460529|ref|XP_003600546.1| DNA primase small subunit [Medicago truncatula]
gi|355489594|gb|AES70797.1| DNA primase small subunit [Medicago truncatula]
Length = 433
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/425 (76%), Positives = 364/425 (85%), Gaps = 1/425 (0%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFN 75
F+ N LK YYG+LFP+ADIFKWMSYG+DG+HP CD+SYFGRREFSFTL+ D YLRFQS+N
Sbjct: 9 FDSNCLKPYYGKLFPYADIFKWMSYGHDGKHPGCDQSYFGRREFSFTLNGDFYLRFQSYN 68
Query: 76 SESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDV 135
+ ELE +IKEKCP KIDIGPVY+VDPAKRHAYAQ +NVF PVERELIFDID+TDYDDV
Sbjct: 69 NALELEKAIKEKCPLKIDIGPVYTVDPAKRHAYAQSDNNVFTPVERELIFDIDMTDYDDV 128
Query: 136 RYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
RYCC GADVCL+CWPLMT+AIKVIDT+LRDDFGF HILWVYSGRRGVHCWVCDGKARRLT
Sbjct: 129 RYCCKGADVCLDCWPLMTIAIKVIDTSLRDDFGFKHILWVYSGRRGVHCWVCDGKARRLT 188
Query: 196 NEQRGAIADYFRVYKGNENSNKKVSFPG-PLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
NEQR ++ADYFRVYKGNENS+KKVS G LHPFL SYT VL+++FE+ LL QNL +T
Sbjct: 189 NEQRASVADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDYFEKVLLTRQNLLAT 248
Query: 255 EERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLR 314
EERYEKILSMIPDES+ SELRGKWQ++RRSS++KEDIN RWEQ K LQSGK K QGLR
Sbjct: 249 EERYEKILSMIPDESIASELRGKWQDSRRSSSAKEDINIVRWEQCKQLLQSGKHKSQGLR 308
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
RCVEEIVF +TYPRLDMEVSKH NHLLKAPFCVHPKTGRVC+PIDP C+EFDPTTVPT+
Sbjct: 309 RCVEEIVFCYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTV 368
Query: 375 SELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQTK 434
+LL ELN R DV+ E TSLG S+ FRSSFL+PL K KEE+E Y K+QQ+K
Sbjct: 369 FQLLEELNNEGLRADVNGERSGTSLGNSVTLFRSSFLEPLQKGSKEEIERSYNLKLQQSK 428
Query: 435 NSLSW 439
NS+ W
Sbjct: 429 NSIGW 433
>gi|388517081|gb|AFK46602.1| unknown [Medicago truncatula]
Length = 433
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/425 (75%), Positives = 362/425 (85%), Gaps = 1/425 (0%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFN 75
F+ N LK YYG+LFP+ADIFKWMSYG+DG+HP CD+SYFGRREFSFTL+ D YLRFQS+N
Sbjct: 9 FDSNCLKPYYGKLFPYADIFKWMSYGHDGKHPGCDQSYFGRREFSFTLNGDFYLRFQSYN 68
Query: 76 SESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDV 135
+ ELE +IKEKCP KIDIGPV++VDPAKRHAYAQ +NVF PVERELIFDID+TDYDDV
Sbjct: 69 NALELEKAIKEKCPLKIDIGPVHTVDPAKRHAYAQSDNNVFTPVERELIFDIDMTDYDDV 128
Query: 136 RYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
RYCC GADVCL+CWPLMT+ IKVIDT+LRDDFGF HILWVYSGRRGVHCWVCDGKARRLT
Sbjct: 129 RYCCKGADVCLDCWPLMTIVIKVIDTSLRDDFGFKHILWVYSGRRGVHCWVCDGKARRLT 188
Query: 196 NEQRGAIADYFRVYKGNENSNKKVSFPG-PLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
NEQR ++ADYFRVYKGNENS+KKVS G LHPFL SYT VL+++FE+ LL QNL +T
Sbjct: 189 NEQRASVADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDYFEKVLLTRQNLLAT 248
Query: 255 EERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLR 314
EERYEKILSMIPDES+ SELRGKWQ++RRSS++KEDIN R EQ K LQSGK K QGLR
Sbjct: 249 EERYEKILSMIPDESIASELRGKWQDSRRSSSAKEDINIVRREQCKQLLQSGKHKSQGLR 308
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
RCVEEIVF +TYPRLDMEVSKH NHLLKAPFCVHPKTGRVC+PIDP C+EFDPTTVPT+
Sbjct: 309 RCVEEIVFCYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTV 368
Query: 375 SELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQTK 434
+LL ELN R DV+ E TSLG S+ FRSSFL+PL K KEE+E Y K+QQ+K
Sbjct: 369 FQLLEELNNEGLRADVNGERSGTSLGNSVTLFRSSFLEPLQKGSKEEIERSYNLKLQQSK 428
Query: 435 NSLSW 439
NS+ W
Sbjct: 429 NSIGW 433
>gi|218196629|gb|EEC79056.1| hypothetical protein OsI_19620 [Oryza sativa Indica Group]
gi|222631272|gb|EEE63404.1| hypothetical protein OsJ_18216 [Oryza sativa Japonica Group]
Length = 449
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 293/385 (76%), Positives = 339/385 (88%), Gaps = 6/385 (1%)
Query: 1 MLIDGPKQ---GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRR 57
M IDG Q +PDGFN +YL++YYG+LFPH D FKW+SYGNDG+HP CD+SY GRR
Sbjct: 11 MEIDGQHQQVANTAVPDGFNADYLRIYYGKLFPHVDFFKWLSYGNDGKHPGCDQSYVGRR 70
Query: 58 EFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFA 117
EFSFTL+NDIY+RFQSF+S +E+ENSIKEKCP KIDIGPVYSVDPAKRHAYAQ G+NVF
Sbjct: 71 EFSFTLENDIYVRFQSFDSVAEMENSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVFV 130
Query: 118 PVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYS 177
PVERELIFDIDI+DYDDVRYCCSGADVC+ECWPLMT+AIK++D +LRDDFGF+HILWVYS
Sbjct: 131 PVERELIFDIDISDYDDVRYCCSGADVCMECWPLMTIAIKILDASLRDDFGFNHILWVYS 190
Query: 178 GRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEV 236
GRRGVHCWVCD +AR+L NEQR AIADYFRVYKG EN+ KKVS G LHPFL RSYT+V
Sbjct: 191 GRRGVHCWVCDSRARKLNNEQRAAIADYFRVYKGGENTMKKVSLTGAVLHPFLARSYTDV 250
Query: 237 LREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRW 296
L+ FFE+KLLLSQ LF++EERY+KIL +IPDE+V SEL KWQ NRRSS SKED+N RW
Sbjct: 251 LKGFFEDKLLLSQQLFASEERYQKILDLIPDENVASELHDKWQGNRRSSISKEDVNATRW 310
Query: 297 EQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCI 356
EQLK+TLQSGK K GLRRC+EEIVF++TYPRLDMEVSKH NHLLKAPFC+HPKTGRVC+
Sbjct: 311 EQLKSTLQSGKHK--GLRRCIEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCV 368
Query: 357 PIDPKDCEEFDPTTVPTLSELLREL 381
PIDP +C++FDPTTVPTLS++ + +
Sbjct: 369 PIDPNNCDDFDPTTVPTLSQVFQGI 393
>gi|334188113|ref|NP_199003.5| DNA primase small subunit [Arabidopsis thaliana]
gi|332007356|gb|AED94739.1| DNA primase small subunit [Arabidopsis thaliana]
Length = 451
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 301/441 (68%), Positives = 362/441 (82%), Gaps = 4/441 (0%)
Query: 1 MLIDGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
M+ID PK I + FN +YL++YYG LFP+ DI KW+SYG+DG+HP CD+ YFGRREFS
Sbjct: 13 MMIDDPKPK--IENDFNVHYLRIYYGNLFPYTDIHKWLSYGHDGKHPGCDEYYFGRREFS 70
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTL+ND+YLR++SF + S +E +IK P KIDIG VYSVDP KRHAYAQ G N+F PVE
Sbjct: 71 FTLENDVYLRYKSFKNASLMEAAIKSNFPYKIDIGAVYSVDPDKRHAYAQSGTNLFTPVE 130
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDIDITDYDDVRYCCSGADVC +CWPLMTVAIKVIDT+LR+DFGF HILWV+SGRR
Sbjct: 131 RELVFDIDITDYDDVRYCCSGADVCSKCWPLMTVAIKVIDTSLREDFGFKHILWVFSGRR 190
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPG-PLHPFLVRSYTEVLRE 239
GVHCWVCD KARRLTNEQR A+A+YFRVYKGNEN+ KKV G LHPFL RSY + ++
Sbjct: 191 GVHCWVCDAKARRLTNEQRSAVAEYFRVYKGNENNAKKVDLMGHSLHPFLARSYVDFIKS 250
Query: 240 FFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL 299
FFE +L +Q++FS++E+YEKIL MI DE + ++LRGKW+ + RSS S+E + RWEQL
Sbjct: 251 FFEGELQATQSIFSSKEKYEKILGMITDEDIQADLRGKWENSARSSLSEEATSLLRWEQL 310
Query: 300 KNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID 359
K LQS + K LR CVEEIVF FTYPR+D+EVSK NHLLKAPFCVHPKTGRVC+PID
Sbjct: 311 KKALQSKRNKALSLRTCVEEIVFTFTYPRIDLEVSKQMNHLLKAPFCVHPKTGRVCVPID 370
Query: 360 PKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTS-LGKSIRFFRSSFLQPLLKSC 418
P +C+EFDP VPTLS+L+ E+N+G RMDVD++ +S LGKSI+FFRSSFL+PLLKSC
Sbjct: 371 PNNCDEFDPLAVPTLSQLIEEINSGGLRMDVDDDDSDSSLLGKSIKFFRSSFLEPLLKSC 430
Query: 419 KEEMESGYKAKIQQTKNSLSW 439
KEE+ES YK KI +TK+S SW
Sbjct: 431 KEEIESSYKTKIAKTKDSFSW 451
>gi|10177372|dbj|BAB10663.1| DNA polymerase alpha subunit IV (primase)-like protein [Arabidopsis
thaliana]
Length = 407
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/394 (65%), Positives = 309/394 (78%), Gaps = 20/394 (5%)
Query: 1 MLIDGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
M+ID PK I + FN +YL++YY DG+HP CD+ YFGRREFS
Sbjct: 13 MMIDDPKPK--IENDFNVHYLRIYY-----------------DGKHPGCDEYYFGRREFS 53
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTL+ND+YLR++SF + S +E +IK P KIDIG VYSVDP KRHAYAQ G N+F PVE
Sbjct: 54 FTLENDVYLRYKSFKNASLMEAAIKSNFPYKIDIGAVYSVDPDKRHAYAQSGTNLFTPVE 113
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDIDITDYDDVRYCCSGADVC +CWPLMTVAIKVIDT+LR+DFGF HILWV+SGRR
Sbjct: 114 RELVFDIDITDYDDVRYCCSGADVCSKCWPLMTVAIKVIDTSLREDFGFKHILWVFSGRR 173
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPG-PLHPFLVRSYTEVLRE 239
GVHCWVCD KARRLTNEQR A+A+YFRVYKGNEN+ KKV G LHPFL RSY + ++
Sbjct: 174 GVHCWVCDAKARRLTNEQRSAVAEYFRVYKGNENNAKKVDLMGHSLHPFLARSYVDFIKS 233
Query: 240 FFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL 299
FFE +L +Q++FS++E+YEKIL MI DE + ++LRGKW+ + RSS S+E + RWEQL
Sbjct: 234 FFEGELQATQSIFSSKEKYEKILGMITDEDIQADLRGKWENSARSSLSEEATSLLRWEQL 293
Query: 300 KNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID 359
K LQS + K LR CVEEIVF FTYPR+D+EVSK NHLLKAPFCVHPKTGRVC+PID
Sbjct: 294 KKALQSKRNKALSLRTCVEEIVFTFTYPRIDLEVSKQMNHLLKAPFCVHPKTGRVCVPID 353
Query: 360 PKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNE 393
P +C+EFDP VPTLS+L+ E+N+G RMDVD++
Sbjct: 354 PNNCDEFDPLAVPTLSQLIEEINSGGLRMDVDDD 387
>gi|297805452|ref|XP_002870610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316446|gb|EFH46869.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 402
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/396 (65%), Positives = 309/396 (78%), Gaps = 22/396 (5%)
Query: 1 MLIDGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
M+ID PK I + FN +YL++YY DG+HP CD+ YFGRREFS
Sbjct: 13 MMIDDPKPK--IENDFNVHYLRIYY-----------------DGKHPGCDEYYFGRREFS 53
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTL+ND+YLR++SF + S +E++IK P KIDIG VYSVDP KRHAYA G N+F PVE
Sbjct: 54 FTLENDVYLRYKSFKNASVMEDAIKSNFPYKIDIGAVYSVDPDKRHAYAHSGTNLFTPVE 113
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDIDITDYDDVRYCCSGADVC +CWPLMTVAIKVIDT+LR+DFGF HILWV+SGRR
Sbjct: 114 RELVFDIDITDYDDVRYCCSGADVCSKCWPLMTVAIKVIDTSLREDFGFKHILWVFSGRR 173
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPG-PLHPFLV--RSYTEVL 237
GVHCWVCD KARRLTNEQR A+A+YFRVYKGNEN+ KKV G LHPFL RSY + L
Sbjct: 174 GVHCWVCDAKARRLTNEQRSAVAEYFRVYKGNENNAKKVDLMGHSLHPFLAYGRSYVDFL 233
Query: 238 REFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWE 297
+ FFE +L +Q+LFS+EE+YEKIL MI DE + ++LRGKW+ + RSS S+E + RWE
Sbjct: 234 KNFFEGELQANQSLFSSEEKYEKILGMITDEDIQADLRGKWENSARSSLSEEATSRLRWE 293
Query: 298 QLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIP 357
QLK LQS K K LR CVEEIVF FTYPR+D+EVSK NHLLKAPFCVHPKTGRVC+P
Sbjct: 294 QLKKRLQSKKNKALSLRTCVEEIVFTFTYPRIDLEVSKQMNHLLKAPFCVHPKTGRVCVP 353
Query: 358 IDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNE 393
IDP +C+EFDP VPTLS+L+ E+N+G RMDVD++
Sbjct: 354 IDPNNCDEFDPLAVPTLSQLIEEINSGGLRMDVDDD 389
>gi|388500114|gb|AFK38123.1| unknown [Lotus japonicus]
Length = 347
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/313 (76%), Positives = 267/313 (85%), Gaps = 1/313 (0%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFN 75
FNPNYLK+YYG+LFP DIF+WMSYGNDG+HP CD SYFGRREFSFTL+NDIYLRFQSFN
Sbjct: 34 FNPNYLKLYYGKLFPFTDIFRWMSYGNDGKHPGCDSSYFGRREFSFTLENDIYLRFQSFN 93
Query: 76 SESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDV 135
+ ELENSIKEK P KIDIGPVY+VDPAKRHAYAQG + VFAPVERELIFDID++DYDDV
Sbjct: 94 NALELENSIKEKSPFKIDIGPVYTVDPAKRHAYAQGDNKVFAPVERELIFDIDMSDYDDV 153
Query: 136 RYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
RYCCSGADVCL CWPLMT+AIKVIDTALRDDFGF HILWVYSGRRGVHCWVCD KARRLT
Sbjct: 154 RYCCSGADVCLNCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDQKARRLT 213
Query: 196 NEQRGAIADYFRVYKGNENSNKKVSFPG-PLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
NEQR AIADYFRVYKGNEN++KK+S G LHPFL SYT VL+ FFE+ LL SQNL +T
Sbjct: 214 NEQRAAIADYFRVYKGNENTHKKISLTGAALHPFLATSYTSVLKHFFEKNLLTSQNLLAT 273
Query: 255 EERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLR 314
EERYEKIL MIPDES+ S+LRGKWQ++RRSS++KEDIN RWEQ K LQSGK +
Sbjct: 274 EERYEKILDMIPDESIASKLRGKWQDSRRSSSTKEDINVVRWEQCKQLLQSGKISHKDYE 333
Query: 315 RCVEEIVFAFTYP 327
++ + A P
Sbjct: 334 GALKRLCSAILTP 346
>gi|224071467|ref|XP_002303474.1| predicted protein [Populus trichocarpa]
gi|222840906|gb|EEE78453.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/289 (80%), Positives = 256/289 (88%), Gaps = 4/289 (1%)
Query: 152 MTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKG 211
MTVAIKVIDTALRDDFGF+HILWVYSGRRGVHCWVCDGKARRLTNEQR A+ADYFRVYKG
Sbjct: 1 MTVAIKVIDTALRDDFGFNHILWVYSGRRGVHCWVCDGKARRLTNEQRAAVADYFRVYKG 60
Query: 212 NENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESV 270
NENS+KKVS GP LHPFLVRSY+EVL FFE KLLLSQN+FSTE+RYEKIL MIPD+S
Sbjct: 61 NENSSKKVSLTGPALHPFLVRSYSEVLERFFETKLLLSQNIFSTEDRYEKILEMIPDKSA 120
Query: 271 TSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLD 330
TSELRGKWQ + SKEDIN RWEQLKNTLQSGK K QGLRRCVEEIVF+FTYPRLD
Sbjct: 121 TSELRGKWQTKK---GSKEDINVVRWEQLKNTLQSGKYKAQGLRRCVEEIVFSFTYPRLD 177
Query: 331 MEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDV 390
MEVS+H NHLLKAPFCVHPKTGRVC+PIDP C+EFDPTTVPTLS+L EL G +R +
Sbjct: 178 MEVSRHMNHLLKAPFCVHPKTGRVCVPIDPNHCDEFDPTTVPTLSQLFEELYIGGTRAED 237
Query: 391 DNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQTKNSLSW 439
+NEW++TSLG+ I FFRSSFLQPLLKSCKEEMES YKAK+QQ+K+ LSW
Sbjct: 238 ENEWDRTSLGQPISFFRSSFLQPLLKSCKEEMESSYKAKLQQSKSLLSW 286
>gi|168029158|ref|XP_001767093.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681589|gb|EDQ68014.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 368
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 221/375 (58%), Positives = 289/375 (77%), Gaps = 23/375 (6%)
Query: 4 DGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTL 63
+ V+ + F+P+YL++YY DG+HP CD + RREFSFTL
Sbjct: 12 EASADSRVVYEDFSPDYLRIYY-----------------DGKHPGCDATIMSRREFSFTL 54
Query: 64 DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVEREL 123
++DIY+R+ SF+ +E+E +IK KCP KIDIG +Y+V+PAKR AYA G D VFA VEREL
Sbjct: 55 EHDIYIRYLSFHDVAEMEATIKSKCPHKIDIGALYNVEPAKRSAYAGGSDRVFASVEREL 114
Query: 124 IFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
+FDID+TDYDD+R CCSGAD+CL+CWPLM VAIK++DT LR+DFGF+H+LWVYSGRRGVH
Sbjct: 115 VFDIDMTDYDDIRTCCSGADICLKCWPLMNVAIKILDTVLREDFGFEHLLWVYSGRRGVH 174
Query: 184 CWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFE 242
CWVCD +ARRL+NE R AIA Y +YKGNEN+ KKVS GP LHP L R+Y E+ R +FE
Sbjct: 175 CWVCDTRARRLSNEARSAIARYLTLYKGNENTTKKVSLTGPSLHPALSRAY-EICRGYFE 233
Query: 243 EKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNT 302
E +L +Q L +EE+++K+L ++PDESV +++R +W +R+S SK+D++ RW+ LK T
Sbjct: 234 EHILPNQGLLRSEEQFDKVLELVPDESVRTQMRDRW---KRASTSKDDVSAIRWKHLKQT 290
Query: 303 LQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKD 362
L++ K+ +RR VEEIVF++TYPRLD+EVSKH NHLLKAPFC+HPKTGRVC+PIDP D
Sbjct: 291 LEN-KKLAPSVRRSVEEIVFSYTYPRLDIEVSKHMNHLLKAPFCIHPKTGRVCVPIDPLD 349
Query: 363 CEEFDPTTVPTLSEL 377
C+ FDPTTVPTL ++
Sbjct: 350 CDNFDPTTVPTLGQV 364
>gi|303283408|ref|XP_003060995.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457346|gb|EEH54645.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 447
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/439 (49%), Positives = 297/439 (67%), Gaps = 8/439 (1%)
Query: 7 KQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDND 66
K N +G + +K+YY RLFP + KW+SYGNDG+HP D + RREF FTLD D
Sbjct: 11 KGANTYAEGDVHDLMKLYYARLFPARSMMKWLSYGNDGKHPQADAGFTQRREFCFTLDGD 70
Query: 67 IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGG---DNVFAPVEREL 123
I+ R+QSF E EL ++K+K PSKID+GPV++VDPAKR AY GG D VFAPVERE
Sbjct: 71 IFCRYQSFKDEKELRAALKDKTPSKIDLGPVFNVDPAKRMAYGAGGAGGDRVFAPVEREF 130
Query: 124 IFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
+ DID+TDYDDVR CCS A++C +CWPLMT+A+K+ID ALR+DFGF H+LWVYSGRRG+H
Sbjct: 131 VMDIDMTDYDDVRSCCSSANICNKCWPLMTIAVKIIDRALREDFGFKHLLWVYSGRRGIH 190
Query: 184 CWVCDGKARRLTNEQRGAIADYFRVYKGNENSN--KKVSFPGPLHPFLVRSYTEVLREFF 241
WVCD +AR ++NE R A+A+YF VYKG + S K+VS PLHP L R+Y +VL ++
Sbjct: 191 VWVCDKRARSMSNEARAAVAEYFSVYKGTDASGTVKRVSLTTPLHPSLKRAYDDVLAPYW 250
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSK-EDINFFRWEQLK 300
+ +L +Q L E+ +E IL+MIPD ++ E +W+ ++ + S D + RW +L
Sbjct: 251 TDTILPNQGLLEDEKFFEPILAMIPDANIRDEFASQWKSGKKFATSACPDESVARWNKLV 310
Query: 301 NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP 360
+ + + ++ E+ FA YPRLD+EVSKH NHLLKAPFCVHPKTGRVC+P+DP
Sbjct: 311 QKVDAANNPGKSGKQSSFEMKFAHAYPRLDVEVSKHMNHLLKAPFCVHPKTGRVCVPMDP 370
Query: 361 KDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
E FDP TVPT++++L EL+ ++E+E TS+ ++ F ++F L K CKE
Sbjct: 371 AKAESFDPMTVPTVAQMLNELDAAGGAAGAEDEYELTSMKGAVDTFNATFWDALDKECKE 430
Query: 421 EMESGYKAKIQQTKNSLSW 439
E+ KA+ ++ W
Sbjct: 431 EL--AVKARDVAGAPTVEW 447
>gi|302757880|ref|XP_002962363.1| hypothetical protein SELMODRAFT_78436 [Selaginella moellendorffii]
gi|300169224|gb|EFJ35826.1| hypothetical protein SELMODRAFT_78436 [Selaginella moellendorffii]
Length = 363
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/346 (62%), Positives = 269/346 (77%), Gaps = 17/346 (4%)
Query: 43 DGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDP 102
DG+HP+CD S+FGRREFSFTL+NDIYLR+ SF SE E ++ EK P KIDIG VYSVDP
Sbjct: 5 DGKHPSCDSSFFGRREFSFTLENDIYLRYMSFRDASEFEATVCEKRPQKIDIGAVYSVDP 64
Query: 103 AKRHAYAQ-GGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDT 161
AKR AYA D VFAPVE+EL+FD+D+TDYDD+R CCSGAD+CL+CWPLMT+AIKV+D+
Sbjct: 65 AKRLAYANVSNDRVFAPVEKELVFDVDMTDYDDIRNCCSGADICLKCWPLMTIAIKVVDS 124
Query: 162 ALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSF 221
LR+DFGFDHILWVYSGRRGVHCWVCD +AR+LTNEQR +IADYFRVYKGNEN+N+KVS
Sbjct: 125 TLREDFGFDHILWVYSGRRGVHCWVCDARARKLTNEQRASIADYFRVYKGNENNNRKVSL 184
Query: 222 PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDE--------SVTSE 273
P LHPFL R+Y++ L +F+E++L+ Q+L +E +K+L ++ E SV SE
Sbjct: 185 PTHLHPFLARTYSQFLSRYFDEEILIKQSLLHPQENADKVLKLLSGEGMSMQYMSSVYSE 244
Query: 274 LRGKWQENRRSSNSKED-INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDME 332
L + +E +R++ D IN RW L+ L + G++R E+VF +TYPRLD+E
Sbjct: 245 LPVQLEEKKRNNTLLPDKINRQRWADLQRKLMQKR----GIQR---ELVFTYTYPRLDLE 297
Query: 333 VSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
V+K NHLLKAPFC+HPKTGRVC+PIDP DC+ FDPTTVPTL E+L
Sbjct: 298 VTKKMNHLLKAPFCIHPKTGRVCVPIDPADCDNFDPTTVPTLPEVL 343
>gi|302758980|ref|XP_002962913.1| hypothetical protein SELMODRAFT_78525 [Selaginella moellendorffii]
gi|300169774|gb|EFJ36376.1| hypothetical protein SELMODRAFT_78525 [Selaginella moellendorffii]
Length = 363
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/346 (61%), Positives = 268/346 (77%), Gaps = 17/346 (4%)
Query: 43 DGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDP 102
DG+HP+CD S+FGRREFSFTL+NDIYLR+ SF SE E ++ EK P KIDIG VYSVDP
Sbjct: 5 DGKHPSCDSSFFGRREFSFTLENDIYLRYMSFRDASEFEATVCEKRPQKIDIGAVYSVDP 64
Query: 103 AKRHAYAQ-GGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDT 161
AKR AYA D VFAPVE+EL+FD+D+TDYDD+R CCSGAD+CL+CWPLMT+AIKV+D+
Sbjct: 65 AKRLAYASVSNDRVFAPVEKELVFDVDMTDYDDIRNCCSGADICLKCWPLMTIAIKVVDS 124
Query: 162 ALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSF 221
LR+DFGFDHILWVYSGRRGVHCWVCD +AR+LTNEQR +IADYFRVYKGNEN+N+KVS
Sbjct: 125 TLREDFGFDHILWVYSGRRGVHCWVCDARARKLTNEQRASIADYFRVYKGNENNNRKVSL 184
Query: 222 PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDE--------SVTSE 273
P LHPFL R+Y++ L +F+E++L+ Q+L +E +K+L ++ + S SE
Sbjct: 185 PTHLHPFLARTYSQFLSRYFDEEILIKQSLLHPQENADKVLKLVSGQGMSMQYMSSAYSE 244
Query: 274 LRGKWQENRRSSNSKED-INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDME 332
L + +E +R++ D IN RW L+ L K+ +Q E+VF +TYPRLD+E
Sbjct: 245 LPVQLEEKKRNNRLLPDEINRQRWADLQRKLMQ-KRGIQV------ELVFTYTYPRLDLE 297
Query: 333 VSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
V+K NHLLKAPFC+HPKTGRVC+PIDP+DC+ FDPTTVPTL E+L
Sbjct: 298 VTKKMNHLLKAPFCIHPKTGRVCVPIDPEDCDNFDPTTVPTLPEVL 343
>gi|307103950|gb|EFN52206.1| hypothetical protein CHLNCDRAFT_139037 [Chlorella variabilis]
Length = 434
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/421 (48%), Positives = 275/421 (65%), Gaps = 31/421 (7%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ +K+YY RLFP ++ KW++YGND +HP D S+F RREF FTLD DI+ +
Sbjct: 21 DMMKLYYSRLFPTQEMAKWLAYGNDSKHPQSDPSFFPRREFCFTLDGDIF-------GGA 73
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
EL ++K++CPSK+DIGPVY+V+P +R AY Q F PVEREL+FDID+TDYDDVR C
Sbjct: 74 ELAAALKDRCPSKLDIGPVYNVEPQRRAAY-QNSAQGFVPVERELVFDIDLTDYDDVRTC 132
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
G +C +CWPLM AI+++D LR DFGF HIL+V+SGRRGVHCWVCD +AR+L++EQ
Sbjct: 133 GQGGHICTKCWPLMAAAIQILDQGLRRDFGFRHILFVFSGRRGVHCWVCDERARKLSDEQ 192
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R AIA YF VYKG E K+ HP + R+Y +LRE FEE++L Q L EE
Sbjct: 193 RSAIASYFAVYKGQERGVAKLVLTSDDHPAIARAYA-LLREAFEERILPQQQLLEEEEVR 251
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLK-------NTLQSGKQ--K 309
+ +L+ +P++++ S +R +WQ S RWE LK L+ GK+ +
Sbjct: 252 KAVLAYLPNDAIRSAVRQRWQGVHGSEA--------RWEALKEEVEAEAQALERGKKGWE 303
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPT 369
+ +RR ++ +VFA YPRLDMEVSK NHLLKAPFCVHPKTG+VC+P+ P++ EFDP
Sbjct: 304 ARAMRRSLKAVVFACAYPRLDMEVSKKMNHLLKAPFCVHPKTGKVCVPVRPEEAYEFDPD 363
Query: 370 TVPTLSELLRELN-TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
TV T+ LL +LN +G + + W T +G ++ FR Q LL +EE+ +G
Sbjct: 364 TVCTVGGLLNQLNSSGSAAAQGEEPWRATDMGLAVDTFR----QCLLDGLQEEVRAGLAR 419
Query: 429 K 429
K
Sbjct: 420 K 420
>gi|159485842|ref|XP_001700953.1| primase subunit of DNA polymerase alpha [Chlamydomonas reinhardtii]
gi|158281452|gb|EDP07207.1| primase subunit of DNA polymerase alpha [Chlamydomonas reinhardtii]
Length = 458
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/429 (45%), Positives = 267/429 (62%), Gaps = 24/429 (5%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ YY +LFP + KW+SYGND +H D +F RREF FTL DI++R+Q+F + L
Sbjct: 26 MPTYYAKLFPTQHMVKWLSYGNDSKHAQADSHFFNRREFCFTLQGDIFVRYQAFKDGAAL 85
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ +I +CP KIDIGPVYS +P RH + F P EREL+FDID+TDYDDVR C S
Sbjct: 86 QEAILRRCPDKIDIGPVYSANPMDRHKFGVA----FHPEERELVFDIDLTDYDDVRTCGS 141
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G +C +CWPLM+VA+K+ID LRD+FGF HILWVYSGRRG+HCWVCD AR+L++EQR
Sbjct: 142 GGHICGKCWPLMSVAVKIIDKGLRDEFGFKHILWVYSGRRGIHCWVCDPSARQLSDEQRS 201
Query: 201 AIADYFRVYKGNENSNKKVS-FPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYE 259
A+A +F +YKG+E +V+ G +HP + R+ +LR + + LL +Q L + E
Sbjct: 202 AVASWFAMYKGHEEGKARVALLGGNMHPAVERA-AGILRSAWVQTLLPAQQLLEDGPQCE 260
Query: 260 KILSMIPDESVTSELRGKWQENRRSSNSKE-DINFFRWEQLKNTLQSGKQ---------- 308
+L +P+E + +R KW E RS N+ D+N RW L+ + +
Sbjct: 261 ALLRYLPEEGLVETVRKKWTEASRSRNAGNMDVNVVRWRALEEAVNERVREERSKKGVVN 320
Query: 309 -KVQG-LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEF 366
KV G L RCV+EI+ A YPRLDMEVSK NHLLKAPFCVHPKTG+VC+P+DP ++F
Sbjct: 321 FKVLGPLERCVDEIIMAHAYPRLDMEVSKKMNHLLKAPFCVHPKTGKVCVPLDPNTVDDF 380
Query: 367 DPT-TVPTLSELLRELNTGDSRMDVD----NEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
DP VPT++ LL EL + W T++ ++ F + L L S KEE
Sbjct: 381 DPVDGVPTVTSLLGELAAAKEAAEGGKPNPEAWRDTAMADAVSVFEACLLDGLAASNKEE 440
Query: 422 MESGYKAKI 430
+ S + +
Sbjct: 441 LTSRTRVAV 449
>gi|255644544|gb|ACU22775.1| unknown [Glycine max]
Length = 242
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/233 (80%), Positives = 209/233 (89%), Gaps = 3/233 (1%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
PD FN N+LK+YYG+LFP AD+ +W+SYGNDG+HP CD+SY GRREFSFTL+ND+YLRFQ
Sbjct: 7 PD-FNLNHLKLYYGKLFPFADLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDVYLRFQ 65
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN-VFAPVERELIFDIDITD 131
SF++ ELENSIKEK P KIDIGPVY+VDPAKR+AYAQ GDN VFAPVERELIFDID++D
Sbjct: 66 SFHNALELENSIKEKTPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSD 125
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YDDVRYCCSGADVCL CWPLMT+AIKVIDTALRDDFGF HILWVYSGRRGVHCWVCDGKA
Sbjct: 126 YDDVRYCCSGADVCLVCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKA 185
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVSFPG-PLHPFLVRSYTEVLREFFEE 243
R+LTNEQRGAIADYFRVYKGNENS+KKVS G LHPFL SYT VL+ + +
Sbjct: 186 RKLTNEQRGAIADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKNYLRK 238
>gi|302845463|ref|XP_002954270.1| hypothetical protein VOLCADRAFT_95007 [Volvox carteri f.
nagariensis]
gi|300260475|gb|EFJ44694.1| hypothetical protein VOLCADRAFT_95007 [Volvox carteri f.
nagariensis]
Length = 466
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 260/441 (58%), Gaps = 53/441 (12%)
Query: 30 PHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCP 89
P ++ + M DG+H D YF RREF FT NDI+ R+Q+F + L+ +I+ +CP
Sbjct: 12 PEINVQEAMPSYYDGKHAQADAHYFNRREFCFTFGNDIFARYQAFKDGTALQEAIQRRCP 71
Query: 90 SKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECW 149
SKIDIGPVYS +P R + F P+EREL+FDID+TDYDDVR C SGA +C +CW
Sbjct: 72 SKIDIGPVYSANPQDRQKFGAS----FQPLERELVFDIDLTDYDDVRTCGSGAHICSKCW 127
Query: 150 PLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVY 209
PLM VA+K+ID LR +FGF +ILWVYSGRRGVHCWVCD AR+LT+EQR A+A++F +Y
Sbjct: 128 PLMAVAVKIIDAGLRSEFGFQNILWVYSGRRGVHCWVCDPSARQLTDEQRSAVANWFAMY 187
Query: 210 KGNENSNKKVSF---PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIP 266
KG+E K++F G +HP + R+ LR + E +L +Q L + E +L +P
Sbjct: 188 KGHEEGRAKIAFLGGVGAMHPAVERA-ARTLRAAWLETILPAQRLLEDGPKCETLLQYLP 246
Query: 267 DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQS-------------------GK 307
DE + ++ KW S + EDIN RW+ L+ + + G
Sbjct: 247 DEGLIEAVKKKWASRSVISRTSEDINLVRWQVLETEVNNKLAEERSRGGKGAGGGGGGGN 306
Query: 308 QKVQG-LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEF 366
KV G L RC+ EI+ A +YPRLDMEVSK NHLLKAPFCVHPKTG+VC+P+DP++ ++F
Sbjct: 307 YKVTGPLERCLNEIIMAHSYPRLDMEVSKKMNHLLKAPFCVHPKTGKVCVPLDPEEVDDF 366
Query: 367 DPTTVPTLSELL-------------------RELNT------GDSRMDVDNEWEKTSLGK 401
DP VPT+ LL E T G SR+ W T++ +
Sbjct: 367 DPDKVPTVGSLLGELKAATEAAAAKLDAGGGEEGQTAATAAEGGSRLGKSEAWRHTAMAR 426
Query: 402 SIRFFRSSFLQPLLKSCKEEM 422
++ F L L + +EE+
Sbjct: 427 AVAVFERCLLNGLTAANREEL 447
>gi|298715191|emb|CBJ27863.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 479
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/435 (44%), Positives = 266/435 (61%), Gaps = 41/435 (9%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGN--------DGRHPACDKS--YFGRREFSFTL 63
+ F+P+ L++YY RLFP+ +++W+ Y N G+ D+ +F +REFSFT+
Sbjct: 40 EAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDSSGKPQPVDEQADFFSKREFSFTI 99
Query: 64 DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVEREL 123
++D+Y+R+Q F + E E ++ K P KIDIG ++++ P K H + G F PVEREL
Sbjct: 100 EDDVYIRYQCFADQKEFEQQVQRKQPHKIDIGAIFTL-PPKNHLAVKPG--AFQPVEREL 156
Query: 124 IFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
+FDID+TDYDDVR CCSGA +C CW MT+A++V+D LR DFGF HILWVYSGRRGVH
Sbjct: 157 VFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLRQDFGFKHILWVYSGRRGVH 216
Query: 184 CWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEE 243
CWV D AR LTNE RGA+ADYF V GN+N +KKV+ P+HP L R+Y E L F E
Sbjct: 217 CWVADDAARALTNEGRGAVADYFGVVAGNDNQSKKVNVSLPIHPSLRRAY-ETLEPLFLE 275
Query: 244 KLLL--SQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKN 301
++ Q L S + K+L+ +P E V L G+W+ S K WE+L
Sbjct: 276 HIITEEGQGLLSDPSHWGKLLATVP-EDVRQTLEGRWKMGGSSPADK-------WEELVE 327
Query: 302 TLQSGKQKVQGLRRCVE-------------EIVFAFTYPRLDMEVSKHRNHLLKAPFCVH 348
++ +K Q L + ++ E+VF TYPRLD+ VSK RNHLLK+PF VH
Sbjct: 328 EMEKKGRKQQQLAKKMKPADRPPTPEQWRYEVVFEHTYPRLDVNVSKGRNHLLKSPFAVH 387
Query: 349 PKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNE----WEKTSLGKSIR 404
PKTGRVC+PIDP EFDP TVPTL +L R+++ D + + KT + K ++
Sbjct: 388 PKTGRVCVPIDPAHVREFDPFTVPTLGQLQRQIDKYDKEHGEETKSVSSINKTEMKKYVQ 447
Query: 405 FFRSSFLQPLLKSCK 419
F +FL L K +
Sbjct: 448 QFEDTFLTGLYKGIR 462
>gi|302418752|ref|XP_003007207.1| DNA primase small subunit [Verticillium albo-atrum VaMs.102]
gi|261354809|gb|EEY17237.1| DNA primase small subunit [Verticillium albo-atrum VaMs.102]
Length = 495
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/415 (46%), Positives = 261/415 (62%), Gaps = 28/415 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P +K++Y RLFP +F+W++ H + F REF+FTL ND YLR+QSF S
Sbjct: 84 DPEIMKLFYQRLFPWRQLFQWLN------HSPTPTNDFAHREFAFTLQNDAYLRYQSFPS 137
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L I PS+ +IGPVY+ +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 138 HDLLRKDILRLMPSRFEIGPVYTTNPRDRKTLRSS--SAFKPLAKELCFDIDLTDYDDIR 195
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C++CW +T+AIKV+D ALRDDFGF HI+WVYSGRRG H WVCD KAR + +
Sbjct: 196 TCCDKANICIKCWQFITMAIKVVDVALRDDFGFKHIMWVYSGRRGAHAWVCDKKARTMPD 255
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+ R AIA Y V KG ++KKV+ PLHP L RS E L+ F+E +L +Q+ ++T E
Sbjct: 256 QMRRAIAGYLEVIKGGAQNSKKVNLWRPLHPHLTRSL-ETLKTHFQEDVLETQDPWATAE 314
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
R E++L ++PD+++ LR KW + RSS SK W + +SG K +
Sbjct: 315 RAERLLQLLPDKNLNEALRKKWDASPGRSSTSK-------WADIDTVARSGASKSLDARA 367
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
LR ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID K EEFDPTTVP
Sbjct: 368 LREAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTKALEEFDPTTVP 427
Query: 373 TLSELLRELN-------TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
T+ +LL E++ ++ +WEKTSL I FR SF+ L+K K+
Sbjct: 428 TVQQLLSEIDEWKADEEEPEAPQKSVQDWEKTSLKPYIDQFR-SFVAGLIKDEKD 481
>gi|346976783|gb|EGY20235.1| DNA primase small subunit [Verticillium dahliae VdLs.17]
Length = 495
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/415 (46%), Positives = 261/415 (62%), Gaps = 28/415 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P +K++Y RLFP +F+W++ H + F REF+FTL ND YLR+QSF S
Sbjct: 84 DPEIMKLFYQRLFPWRQLFQWLN------HSPTPTNDFAHREFAFTLQNDAYLRYQSFPS 137
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 138 HDLLRKDVLRLMPSRFEIGPVYTTNPRDRKTLRSS--SAFKPLAKELCFDIDLTDYDDIR 195
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C++CW +T+AIKV+D ALRDDFGF HI+WVYSGRRG H WVCD KAR + +
Sbjct: 196 TCCDKANICIKCWQFITMAIKVVDVALRDDFGFKHIMWVYSGRRGAHAWVCDKKARTMPD 255
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+ R AIA Y V KG ++KKV+ PLHP L RS E L+ F+E +L +Q+ ++T E
Sbjct: 256 QMRRAIAGYLEVIKGGAQNSKKVNLWRPLHPHLTRSL-ETLKTHFQEDVLETQDPWATAE 314
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
R E++L ++PD+++ LR KW + RSS SK W + +SG K +
Sbjct: 315 RAERLLQLLPDKNLNEALRKKWDASPGRSSTSK-------WADIDTVARSGASKSLDARA 367
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
LR ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID K EEFDPTTVP
Sbjct: 368 LREAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTKALEEFDPTTVP 427
Query: 373 TLSELLRELN-------TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
T+ +LL E++ ++ +WEKTSL I FR SF+ L+K K+
Sbjct: 428 TVQQLLSEIDEWKADEEEPEAPQKSVQDWEKTSLKPYIDHFR-SFVAGLIKDEKD 481
>gi|412987581|emb|CCO20416.1| DNA primase small subunit [Bathycoccus prasinos]
Length = 493
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/417 (45%), Positives = 268/417 (64%), Gaps = 30/417 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSY--GNDGRHPACDKSYF-GRREFSFTLDNDIYLRFQSFNSE 77
++ YY +FP +F+W+SY + D+ F REF FTL +I++R+ S+ E
Sbjct: 49 MRPYYAHIFPSKQLFEWLSYEGATSSKESRKDQQQFIQNREFCFTLKGEIFVRYNSYQDE 108
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
L +K K P KIDIGPV+S +P R AY GG F PVEREL+FDID+TDYDDVR
Sbjct: 109 KSLRKDLKTKVPGKIDIGPVFSHNPKNRLAY--GGS--FKPVERELVFDIDMTDYDDVRT 164
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CC A +C +CWPLM A+KV+D LR+DFGF+HILWVYSGRRG+H WVCD +AR+L++E
Sbjct: 165 CCDQAKICPKCWPLMNCAVKVLDVGLREDFGFEHILWVYSGRRGIHAWVCDERARKLSDE 224
Query: 198 QRGAIADYFRVYKGNENSNKK----VSF--------PGPLHPFLVRSYTEVLREFFEEKL 245
+R A+A+YF V+KG E +K +SF G +HP L +Y +VL+ F+E++
Sbjct: 225 ERSAVAEYFSVFKGVEGGGEKKKTNLSFGSGKRAWGGGKMHPRLEEAYWKVLKPFWEKEF 284
Query: 246 LLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKE---DINFFRWEQLKNT 302
L +Q L +++ +E ILSMIPD +V + + N+ + S++ D+N +RW+++
Sbjct: 285 LPAQKLMESKKHFETILSMIPDANVRQKAEFDFNTNKMPTVSRDGDVDVNTWRWQRIVKA 344
Query: 303 LQS---GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID 359
++ G + L C++ I+F+ YPRLD EVSKH NHLLKAPFCVHPKTGRVC+PID
Sbjct: 345 VEDELRGPKVNWDLTSCLQRIIFSHVYPRLDAEVSKHMNHLLKAPFCVHPKTGRVCVPID 404
Query: 360 PKDCEEFDP--TTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPL 414
P++C+ FDP + P + ELL+E + +N +KT++GK++ F F L
Sbjct: 405 PENCDAFDPFSSDAPKVHELLQEYKKFGAD---ENAVKKTAMGKALETFERCFWSKL 458
>gi|358385709|gb|EHK23305.1| hypothetical protein TRIVIDRAFT_169007 [Trichoderma virens Gv29-8]
Length = 521
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/413 (45%), Positives = 260/413 (62%), Gaps = 30/413 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 108 DPEVMRSFYQRLFPWRQLFQWLN------HSPTPTNDFGNREFAFTLQNDAYLRYQSFAT 161
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P R + + + F P+ +EL FDID+TDYDD+R
Sbjct: 162 ADLLRKDVLRLMPSRFEIGPVYTTNPRDRKSLHKS--SAFKPLSKELCFDIDLTDYDDIR 219
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A +C +CW MT+AIKV+D ALRDDFGF+HI+WVYSGRRG H WVCD KAR + +
Sbjct: 220 TCCDKATICNKCWQFMTMAIKVVDIALRDDFGFNHIMWVYSGRRGAHAWVCDKKARSMDD 279
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA+Y V KG +S KKV+ PLHP L RS ++L+ F+E +L Q+ + T+E
Sbjct: 280 QKRRAIANYLEVIKGGSHSGKKVNVKRPLHPHLSRSL-DILKTHFQEDVLAVQDPWGTDE 338
Query: 257 RYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
+ +K+L ++PD ++ LR KW+ RSS SK W + ++G K +G
Sbjct: 339 QAQKLLQLLPDRTLNDSLRRKWEAAPGRSSTSK-------WADIDAVAKTGASKHLDAKG 391
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID K+ E+FDP VP
Sbjct: 392 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTKNLEDFDPLGVP 451
Query: 373 TLSELLRELNTGDSRMDVDN---------EWEKTSLGKSIRFFRSSFLQPLLK 416
T+ LL E++T D D +WEKTSL + FR SF+ L+K
Sbjct: 452 TVQSLLAEIDTWKGGEDGDEDDKSKANVADWEKTSLKPYVEQFR-SFVSALIK 503
>gi|321477962|gb|EFX88920.1| hypothetical protein DAPPUDRAFT_206450 [Daphnia pulex]
Length = 406
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 259/423 (61%), Gaps = 30/423 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
N + YY RLFP+ F+W++YGN H YF REFSFTL +DIY+R+QSF
Sbjct: 5 NEEAMLTYYKRLFPYGPYFRWLNYGNMKEH------YFHNREFSFTLPDDIYIRYQSFKD 58
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
+ ELE +K+ P KID+G VY+ P + + F P+E+EL+FDID+TDYDDVR
Sbjct: 59 QDELEEEMKKMKPQKIDLGAVYNHRPKNHRSISH-----FIPMEKELVFDIDMTDYDDVR 113
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC GAD+C +CW M VAIKV+D ALRDDFG+ H+LWV+SGRRGVHCWVCD AR L
Sbjct: 114 NCCQGADICDKCWKFMVVAIKVLDAALRDDFGYQHLLWVFSGRRGVHCWVCDDAARALDQ 173
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFP-GPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE 255
R A+A+Y ++ KG E NKKVSF LHP + R+ ++ + FE ++ Q++ +E
Sbjct: 174 SARSAVAEYLQIIKGGEQQNKKVSFNYEHLHPAVSRA-ARIVEDHFESMMVKDQDILGSE 232
Query: 256 ERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR 315
E +K L+MI DE + + L S++ RW + S + + L
Sbjct: 233 EAIKKFLTMISDEKLRNTLEKSMLSYHDSAS--------RWRVFEELTASTNKNKRQLSH 284
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
EEI+ TYPRLD+ VSK NHLLK+PFCVHPKTG++C+PIDP D EEF P TVPTL+
Sbjct: 285 LKEEIMLQLTYPRLDINVSKQLNHLLKSPFCVHPKTGKICVPIDPLDVEEFSPETVPTLT 344
Query: 376 ELLREL-------NTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
+L+ EL TG + ++E+T+L SI+ F+ FL L S K + + A
Sbjct: 345 QLINELLELEVCDGTGKDGKSL-KDYERTALNPSIQLFK-KFLNNLESSWKHKRIAASDA 402
Query: 429 KIQ 431
K++
Sbjct: 403 KME 405
>gi|443688224|gb|ELT90971.1| hypothetical protein CAPTEDRAFT_172979 [Capitella teleta]
Length = 418
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/408 (47%), Positives = 269/408 (65%), Gaps = 26/408 (6%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P++L +YY R FP+ FKW++YG K+YF REFSFTL +D+YLR+QSF+ +
Sbjct: 14 PDFLPMYYKRFFPYGAYFKWLNYG------GVPKNYFSHREFSFTLKDDVYLRYQSFSDK 67
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
ELE I+++CP KIDIG V+S P + A + D F +E+EL+FDID+TDYDDVR+
Sbjct: 68 QELEKEIQKRCPYKIDIGAVFSHRPRDQKA-VKAAD--FRAMEKELVFDIDMTDYDDVRF 124
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGAD+C +CWPLMT+AIKVI +L DDFGF+HILWVYSGRRGVHCWVCD AR+++
Sbjct: 125 CCSGADICSKCWPLMTIAIKVIHRSLCDDFGFEHILWVYSGRRGVHCWVCDEVARKMSQT 184
Query: 198 QRGAIADYFRVYKGNENSNKKVS-FPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
R A+A+Y V KG EN KKV+ + G +HP + + + + F+ + Q+ T+E
Sbjct: 185 ARSAVAEYLSVVKGGENQAKKVNLYTGNIHPSITAALDIIGGKSFKSYAIEKQDFAGTDE 244
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
+ +KILS +PDE+ + +++N + S N F+ E +K +K+ L
Sbjct: 245 QIQKILSFVPDENFRDGIMNVYEKNHPKT-SYTFWNVFK-EYIKEKADFTHKKLSNLP-- 300
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
+E++ + YPRLD+ VSK NHLLK+PFCVHPKTGRVC+PID + EEFDP TVPT+S+
Sbjct: 301 -DELMLQYCYPRLDVNVSKGVNHLLKSPFCVHPKTGRVCVPIDHEKAEEFDPFTVPTISQ 359
Query: 377 LLRELNTGDSRMDVDN-------EWEKTSLGKSIRFFRSSFLQPLLKS 417
L EL T D D DN ++ +TSLG+ + F +FL+ L K+
Sbjct: 360 LCDELATND---DSDNSSKRRVKDYRQTSLGRYMHVF-DNFLKKLEKT 403
>gi|345497273|ref|XP_001601538.2| PREDICTED: DNA primase small subunit-like [Nasonia vitripennis]
Length = 413
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 190/415 (45%), Positives = 265/415 (63%), Gaps = 32/415 (7%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ L +YY RLFP+ D ++W+SYG + S F RREFSFTL +DIY+RFQSFN
Sbjct: 8 DLLPLYYSRLFPYIDYYRWLSYG--------EASTFSRREFSFTLRDDIYIRFQSFNKID 59
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
+L+N IK CP KIDIG VY+V P+ + G + F P++RE++ DID+TDYD+VR C
Sbjct: 60 DLKNEIKRLCPHKIDIGAVYNVAPSNK-----GREIKFEPIQREVVIDIDMTDYDEVRSC 114
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
CSGADVC +CW M +A+K++D ALRDDFGFDHILWV+SGRRG+HCWVCD KAR LT
Sbjct: 115 CSGADVCNKCWKYMVLAVKILDVALRDDFGFDHILWVFSGRRGIHCWVCDKKARFLTQNG 174
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R A+A Y ++ G E + KKV +H + V+ ++ +F + + QN+ TEER
Sbjct: 175 RKAVAHYLQLISGGEFTKKKVKLNRKMH-YSVKRAVSIIEPYFTKMCMEEQNMLGTEERI 233
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKED-INFFRWEQLKNTLQSGKQKVQGLRRCV 317
K L ++ +E + +E++ + ++ S E +N FR + QSG +K + +
Sbjct: 234 TKFLGILAEEDLRNEVKAIFDKHSTSVKKWEAFVNHFREQT-----QSGSKKWRRTPHLI 288
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
EEI+ + YPRLD+ V+K NHLLK+PFCVHPKTG+V IPI+PK ++FDP VPT+ L
Sbjct: 289 EEIIIQYAYPRLDINVTKGMNHLLKSPFCVHPKTGKVSIPINPKVVDQFDPHNVPTIMTL 348
Query: 378 LRELNTGDSR------MDVDN-----EWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
+ E+N D++ VDN +++KTSL K F+ FL+ L S K E
Sbjct: 349 IDEVNAFDAKEITEQGESVDNVKRIKDYKKTSLNKPFHAFQ-EFLRGLENSQKGE 402
>gi|322708046|gb|EFY99623.1| DNA primase small subunit [Metarhizium anisopliae ARSEF 23]
Length = 513
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 188/413 (45%), Positives = 259/413 (62%), Gaps = 30/413 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 101 DPEVMRSFYQRLFPWRQLFQWLN------HSPTPTNDFGNREFAFTLQNDAYLRYQSFAT 154
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 155 ADLLRKDVLRLMPSRFEIGPVYSTNPRDRKMLRNS--SAFKPLAKELCFDIDLTDYDDIR 212
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW MT+AIKV+D ALR+DFGF HI+WVYSGRRG H WVCD K R L +
Sbjct: 213 TCCDKANICNKCWKFMTMAIKVVDVALREDFGFKHIMWVYSGRRGAHAWVCDKKVRSLDD 272
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V KG S KKV+ PLHP L RS E+L+ F+E +L Q+ + TEE
Sbjct: 273 QKRKAIAGYLEVVKGGAQSGKKVNVRRPLHPHLARSL-EILKTHFQEDVLEVQDPWGTEE 331
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
RYEK+L ++PD ++ LR KW R+S SK W + ++G K +
Sbjct: 332 RYEKLLQLLPDRNLNESLRRKWDAAPGRASVSK-------WADIDALAKTGASKNLDARA 384
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID ++ E+FDP VP
Sbjct: 385 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTRELEDFDPLAVP 444
Query: 373 TLSELLRELNT-----GDSRMDVD----NEWEKTSLGKSIRFFRSSFLQPLLK 416
T+ ELL E+++ G + D + ++WEKTSL + +FR +F+ ++K
Sbjct: 445 TVQELLGEIDSWKGDDGAASQDDNGKGISDWEKTSLKPYVEYFR-TFVNGIMK 496
>gi|384252896|gb|EIE26371.1| prim-pol domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 447
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 190/427 (44%), Positives = 270/427 (63%), Gaps = 34/427 (7%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ ++ YYG FP+ + +W+SYGND + P D ++F RREF FTLD DI++R+QSF +
Sbjct: 49 DLMRPYYGLKFPYNEFCQWLSYGNDTKLPQADSNFFQRREFCFTLDGDIFVRYQSFKVAA 108
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGG-DNVFAPVERELIFDIDITDYDDVRY 137
E+ K P+KIDIGPVY+VDP +R AY G + F PVEREL+FDID+TDYDDVR
Sbjct: 109 EIH--ALPKLPAKIDIGPVYNVDPQRRKAYTGGASERGFLPVERELVFDIDLTDYDDVRT 166
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
C +C CWPLM VA+++ID +LR+DFGF+HILWV+SGRRG+HCWVCD +AR+LT+E
Sbjct: 167 CGKEGHICAACWPLMAVAVEIIDASLREDFGFEHILWVFSGRRGIHCWVCDERARKLTDE 226
Query: 198 QRGAIADYFRVYKGNENSNKKVSF---PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
QR A+A + VYKG E +++ HP + R+Y VL + + E +L Q L +
Sbjct: 227 QRSALAAFLSVYKGTEGGIARLALSTVSNSNHPSVERAY-RVLSDAWTEHILPQQRLLAD 285
Query: 255 EERYEKILSMIPDESVTSELRGKW--QENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQG 312
E +E +L+ + D+ V LRG+W ++ R ++ DI+ RW L++ +
Sbjct: 286 EAGWEGVLAYVKDDDVAERLRGRWAREQGRLTAG---DISVERWADLESEIDK------- 335
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
+EI+FA+ YPRLD+EVSK NHLLKAPFCVHPKTG+VC+P+DP + FDP V
Sbjct: 336 -----KEIIFAYAYPRLDVEVSKKMNHLLKAPFCVHPKTGKVCVPMDPSNIWAFDPEQVT 390
Query: 373 TLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQ 432
T+ +LL DS+ D + ++ ++ FR FL L + K +G AK +
Sbjct: 391 TVHDLLE--TDKDSQ---DAATAEAAMEAAVGTFRRCFLNGLRAASK----AGLVAKARA 441
Query: 433 TKNSLSW 439
++ L+W
Sbjct: 442 SEG-LAW 447
>gi|322697509|gb|EFY89288.1| DNA primase small subunit [Metarhizium acridum CQMa 102]
Length = 512
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 253/405 (62%), Gaps = 29/405 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 100 DPEVMRSFYQRLFPWRQLFQWLN------HSPTPTNDFGNREFAFTLQNDAYLRYQSFAT 153
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 154 ADLLRKDVLRLMPSRFEIGPVYSTNPRDRKMLRNS--SAFKPLAKELCFDIDLTDYDDIR 211
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW MT+AIKV+D ALR+DFGF HI+WVYSGRRG H WVCD K R L +
Sbjct: 212 TCCDKANICNKCWKFMTMAIKVVDVALREDFGFKHIMWVYSGRRGAHAWVCDKKVRSLDD 271
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V KG S KKV+ PLHP L RS E+L+ F+E +L Q+ + TEE
Sbjct: 272 QKRKAIAGYLEVVKGGAQSGKKVNVRRPLHPHLARSL-EILKTHFQEDVLEVQDPWGTEE 330
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
RYEK+L ++PD + LR KW R+S SK W + ++G K +
Sbjct: 331 RYEKLLQLLPDRILNESLRRKWDAAPGRASVSK-------WADIDAVAKTGASKNLDARA 383
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID ++ ++FDP TVP
Sbjct: 384 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTRELQDFDPLTVP 443
Query: 373 TLSELLRELNT-----GDSRMDVD----NEWEKTSLGKSIRFFRS 408
T+ ELL E+++ G + D ++WEKTSL + +FRS
Sbjct: 444 TVQELLGEIDSWKGDDGAASQDDSGKGISDWEKTSLKPYVEYFRS 488
>gi|390334961|ref|XP_791278.3| PREDICTED: DNA primase small subunit-like [Strongylocentrotus
purpuratus]
Length = 428
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/432 (44%), Positives = 273/432 (63%), Gaps = 33/432 (7%)
Query: 4 DGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTL 63
+ P + N PD P L VYY RLFP ++W++YG KSYF REFSFTL
Sbjct: 7 ETPVKSNYSPDTL-PELLPVYYKRLFPFGPYYRWLNYG------GAPKSYFLNREFSFTL 59
Query: 64 DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVEREL 123
+NDIY+R+QSF+ ++E+E I+++CP KIDIG V++ P K H + F E+EL
Sbjct: 60 ENDIYIRYQSFSDQNEMEKEIQKRCPYKIDIGAVFTHKP-KDHRTLKAA--AFQAQEKEL 116
Query: 124 IFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
+FDID+TDYDDVR CC GAD+C +CWPLMT+AIK++D+AL +DFGF+H LWVYSGRRGVH
Sbjct: 117 VFDIDMTDYDDVRSCCQGADICSKCWPLMTIAIKIVDSALYEDFGFEHRLWVYSGRRGVH 176
Query: 184 CWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEE 243
CWVCD AR+L+ R AIA+Y + KG EN KKVS P LHP + R+ +V+ +FE+
Sbjct: 177 CWVCDEAARKLSQNARSAIAEYLSIVKGGENQVKKVSLPDQLHPSVERA-KQVIVSYFED 235
Query: 244 KLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTL 303
L Q++ +E ++K+L+++PD+ E + + SNS E R E++ +
Sbjct: 236 YALNKQDILGDKESWKKVLALVPDDKGHLE-----NDMTKGSNSLERWKLLR-ERVSREV 289
Query: 304 QSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDC 363
G+ K G + V EI F + YPRLD+ VSK NHLLK+PFCVHPKTGRVC+ +D +
Sbjct: 290 SVGRAKRCG--QLVAEIAFQYCYPRLDVNVSKGVNHLLKSPFCVHPKTGRVCVAMDTAEL 347
Query: 364 EEFDPTTVPTLSELLRELNTGDSR-MDVDN------------EWEKTSLGKSIRFFRSSF 410
+ FDP VP +S+L E++ D + +N +++KTSL K++ F F
Sbjct: 348 DRFDPLAVPDISQLCLEIDEYDRKNQPTENDENQPPTKKRIKDYKKTSLLKNVEVF-EKF 406
Query: 411 LQPLLKSCKEEM 422
+ L K+ K ++
Sbjct: 407 VVSLEKTWKGKL 418
>gi|405951528|gb|EKC19433.1| DNA primase small subunit [Crassostrea gigas]
Length = 441
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/427 (44%), Positives = 267/427 (62%), Gaps = 34/427 (7%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY +LFP+ ++W++YG K YF REFSFTL +D+Y+R+QSF +
Sbjct: 13 PDLLPIYYKKLFPYGLYYRWLNYG------GVPKPYFTNREFSFTLKDDVYIRYQSFADQ 66
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
E+E I+++CP KIDIG V+S P K H + F E+EL+FDID+TDYDDVR
Sbjct: 67 QEMEKEIQKRCPYKIDIGAVFSHKP-KDHKTVKAA--AFQAQEKELVFDIDMTDYDDVRT 123
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGAD+C +CWPLM +A+K++D AL +DFGF+H LWVYSGRRGVHCWVCD AR+L+
Sbjct: 124 CCSGADICEKCWPLMQIAVKILDRALEEDFGFEHRLWVYSGRRGVHCWVCDETARKLSQN 183
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
R A+A+Y + KG E+ NKK+S LHPF+ +S E+++ F + + Q+ EE
Sbjct: 184 GRTAVAEYLSLVKGGEHQNKKISLDTTRLHPFISQSL-EIVKARFYDYAVKKQDFLGDEE 242
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV--QGLR 314
+K+L+ + +EN S ++D + W L+N + K + +G +
Sbjct: 243 NQKKVLTEL-------------EENFTSKEFEKDTSKTAWAVLRNHVDKKKSEANYKGSK 289
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
+EEI+ + YPRLD+ VSK NHLLK+PFCVHPKTGRVC+PIDPK +EFDP VPT+
Sbjct: 290 YVLEEIMLQYCYPRLDVNVSKGVNHLLKSPFCVHPKTGRVCVPIDPKKIDEFDPMAVPTI 349
Query: 375 SELLRELNT--GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQ 432
SE+L ELN+ + E+ KTSL + + F F++ L EE G I+Q
Sbjct: 350 SEILEELNSVEKEDSNKKTKEFNKTSLKECTQVFE-RFVKKL-----EETWKGKGKMIEQ 403
Query: 433 TKNSLSW 439
+ ++W
Sbjct: 404 SATIVAW 410
>gi|422295194|gb|EKU22493.1| DNA primase small subunit [Nannochloropsis gaditana CCMP526]
Length = 462
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 188/437 (43%), Positives = 272/437 (62%), Gaps = 41/437 (9%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACD--KSYFGRREFSFTLDNDIYLRFQS 73
F+P L+ +Y RLFP+ +FKW+SYGND + A + YF REFSFT+++DIY+R+QS
Sbjct: 23 FSPELLRFFYNRLFPYQPMFKWLSYGNDPDNDAAHIVRDYFACREFSFTINDDIYIRYQS 82
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F SE+E++I++K P KIDIG V+++ P H F PVERELIFDID+TDYD
Sbjct: 83 FRDASEMESAIQKKQPHKIDIGAVFTLPPKDHHTVKA---EAFKPVERELIFDIDMTDYD 139
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
D+R CC+GA +C +CW MT+A+KV+DTALR+DFGF +ILWVYSGRRGVHCWVCD AR
Sbjct: 140 DIRSCCTGAKICPKCWVFMTMAVKVVDTALREDFGFRYILWVYSGRRGVHCWVCDPNARA 199
Query: 194 LTNEQRGAIADYFRVYKGNENS-NKKVSFPGPLHPFLVRSYTEVLREFFEEKLL--LSQN 250
L+N+ R A+ +Y + +GNE S K PLHP R++ ++L FE +L Q
Sbjct: 200 LSNDGRSAVVEYLSLPRGNEKSKGKNGGLSWPLHPSFTRAF-DILEPMFESGVLGEAGQG 258
Query: 251 LFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQ------ 304
+ +E ++ +L +PDE + + LR +E RR +N+++ RW ++K+ ++
Sbjct: 259 VLDSENSWDTLLDTLPDEDLANRLR---REMRRLTNAQD-----RWLEIKSQVRAASSAH 310
Query: 305 -SGKQKVQ-----------GLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
SG + Q L E+VF + YPRLD+ VSK NHLLK+PF VHPKTG
Sbjct: 311 ASGNARRQSRGGRAGNGLFALDLWKYEVVFQYCYPRLDVNVSKGTNHLLKSPFAVHPKTG 370
Query: 353 RVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDN------EWEKTSLGKSIRFF 406
RVC+PIDP+D + FDP VPTL L +++ D++ + +++KT L ++
Sbjct: 371 RVCVPIDPEDVDNFDPFRVPTLKALAAQIDAYDAQNAQNASAKALPDYKKTELKSAVELL 430
Query: 407 RSSFLQPLLKSCKEEME 423
+ P+ + K ++
Sbjct: 431 ERCVVDPVALATKRRLK 447
>gi|301121816|ref|XP_002908635.1| DNA primase small subunit, putative [Phytophthora infestans T30-4]
gi|262103666|gb|EEY61718.1| DNA primase small subunit, putative [Phytophthora infestans T30-4]
Length = 428
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/428 (43%), Positives = 258/428 (60%), Gaps = 42/428 (9%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
+ F+ L++YY RLFP+ + +W+SY DG + + RRE S+TL+ND Y+R+++
Sbjct: 4 EDFSTELLQLYYDRLFPYQQMAQWLSY--DG-----GEEFLFRRELSYTLENDTYIRYKA 56
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F++ EL+ S+ + P KIDIG V+SV PA + + F P +REL+FDID+TDYD
Sbjct: 57 FHNAEELKTSMCKTMPFKIDIGAVFSVSPADKGKVSAVD---FTPEQRELVFDIDLTDYD 113
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
D+R CC GA +C CW M A+KV++ ALR+DFGF+++LWVYSGRRG+HCW+ D AR
Sbjct: 114 DIRTCCEGAAICNRCWQFMIAAVKVLNAALREDFGFENLLWVYSGRRGIHCWIADESARG 173
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLL--SQNL 251
L NE R A+ Y + +GNENS +KV PLHP L R+Y + L FE+ +L Q +
Sbjct: 174 LENEARSAVVGYLSLVEGNENSARKVKLREPLHPSLDRAYRQ-LEPLFEDMILSDKGQGI 232
Query: 252 FSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQ 311
S+E+++ K+L+M+PDE + + + +W RS+ E R K L++
Sbjct: 233 MSSEKQWNKLLAMVPDEDIRANMTRRWSATNRSTGPAEKWRELRDAVEKQVLKNANSARS 292
Query: 312 G--------------------LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKT 351
G LR C++EIV A+ YPRLD VSK RNHLLK+PF VHPKT
Sbjct: 293 GSNVKRSAPNSDASKRFLAAELRTCLQEIVLAYLYPRLDANVSKQRNHLLKSPFAVHPKT 352
Query: 352 GRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFL 411
GRVC+PID E FDP VPTL +L EL++ S TS+ K + FF SSFL
Sbjct: 353 GRVCVPIDVSSMESFDPFKVPTLGQLHEELDSDKS---------ATSMKKYVDFFESSFL 403
Query: 412 QPLLKSCK 419
+PL K
Sbjct: 404 KPLAAVAK 411
>gi|407924789|gb|EKG17816.1| DNA primase small subunit [Macrophomina phaseolina MS6]
Length = 486
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/416 (43%), Positives = 260/416 (62%), Gaps = 29/416 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W+ N P+ D F REF+FTL ND YLR+Q+F +
Sbjct: 73 DPEIMRAFYQRLFPFRYLFQWL---NHSPSPSPD---FAHREFAFTLQNDAYLRYQAFPT 126
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + + F P+ +EL+FDID+TDYD++R
Sbjct: 127 ADLLRKQCVQMIPSRFEIGPVYSTNPRDRKSLRKA--TAFKPISKELVFDIDMTDYDEIR 184
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC+GA++C CW +T+AIKV+DTAL++DFGF HILWVYSGRRG H WVCD +AR + +
Sbjct: 185 TCCTGANICHSCWSFITMAIKVVDTALKEDFGFKHILWVYSGRRGAHAWVCDKRARDMDD 244
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y + KG + KKV+ PLHP L RS ++LR +F+ +LL Q+ +++ E
Sbjct: 245 QKRRAIAGYLELLKGGDQGGKKVNVKRPLHPHLERSL-KILRAYFQTNILLEQDPWASPE 303
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV---QGL 313
+ ++LS+IPD+ + + L+ KW +S+ +W + N SG + L
Sbjct: 304 KSARLLSLIPDKQLAAALQKKWDSAPSRPSSQ------KWADIDNLASSGASSTLDPKAL 357
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
+ ++I+ +TYPRLD EVSK NHLLK+PF VHP TGRVC+PID + EEFDP VPT
Sbjct: 358 KEAKQDILLEYTYPRLDAEVSKKLNHLLKSPFVVHPGTGRVCVPIDTRSVEEFDPLGVPT 417
Query: 374 LSELLRELN----TGDSRMDVDN------EWEKTSLGKSIRFFRSSFLQPLLKSCK 419
++ELL E++ MD D+ +WEKT L + FFR F+ L+K K
Sbjct: 418 VTELLGEIDEWARANAGSMDTDDAAKMIPDWEKTRLRPYVEFFR-GFVTGLVKDEK 472
>gi|358060656|dbj|GAA93652.1| hypothetical protein E5Q_00297 [Mixia osmundae IAM 14324]
Length = 539
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 184/417 (44%), Positives = 261/417 (62%), Gaps = 29/417 (6%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
D NP+ +K++Y RLFP +F+W+ N P S + RE +FTL ND+YLR+QS
Sbjct: 139 DVSNPSVMKLFYARLFPFRQLFRWL---NGSEKP---NSNWTHRELAFTLANDVYLRYQS 192
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F ++++L I PS+ +IGP+Y+ P R + F PV REL+ DID+ +YD
Sbjct: 193 FTNDADLRKEILRLNPSRFEIGPIYTSRPRDRRTVNKAA---FKPVRRELVMDIDMDEYD 249
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
+R CC+G +C CW + +A KV+DTALR+DFGF+H+LWVYSGRRG+HCW+ D A
Sbjct: 250 AIRTCCTGKKICKRCWGFIAMAAKVLDTALREDFGFEHLLWVYSGRRGIHCWISDPAACS 309
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFS 253
L ++QR AI +Y V KG +KKV+ PLHP L R+Y E L+ +F + +L Q+ F
Sbjct: 310 LNDDQRRAIVNYLEVIKGGGGQDKKVNLHRPLHPSLKRAY-EQLKPYFNDVILKDQDAFD 368
Query: 254 TEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQG- 312
T+ER+E +L ++PD+ V + R +W SS+ +W L +++ GK K +G
Sbjct: 369 TDERWEALLRIVPDD-VANRCRAEWTGKNISSS-------LKWRDLLSSV--GKYKTKGK 418
Query: 313 --LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
+ VE+++ +TYPRLD EVSKH NHLLK+PF VHP TGRVC+PI PKD ++FDP
Sbjct: 419 ESAKDIVEDVILQYTYPRLDAEVSKHLNHLLKSPFVVHPGTGRVCVPILPKDIDDFDPEA 478
Query: 371 VPTLSELLRELNTGDSRMDV-DNEWEKTSLGKSIRFFRSSF-----LQPLLKSCKEE 421
VPT+ +LLREL D+R + N+WE TSL +R +++ QP KS K E
Sbjct: 479 VPTVGQLLRELEQADARGNAGSNDWESTSLAPYVRLYKAHIDSFPGFQPSSKSVKAE 535
>gi|328769149|gb|EGF79193.1| hypothetical protein BATDEDRAFT_12476 [Batrachochytrium
dendrobatidis JAM81]
Length = 405
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 186/408 (45%), Positives = 258/408 (63%), Gaps = 24/408 (5%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
LK +Y RLFP ++++W+SYG G H +F REFSFTL ++ YLR+QS+ +L
Sbjct: 3 LKTFYQRLFPFKEMYRWLSYG--GVH----NYHFTNREFSFTLLSETYLRYQSYKGFEDL 56
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ I CP+KIDIG VY++ P + A +VF PVEREL+FDID+TDYD++R CCS
Sbjct: 57 KADIVRLCPAKIDIGAVYNIKPCEGKTVAS---SVFIPVERELVFDIDMTDYDEIRTCCS 113
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA+VC +CW MT++IK+I AL++DFGF HILWV+SGRRGVHCWV D +AR+LT E R
Sbjct: 114 GANVCKKCWHFMTISIKIIHRALKEDFGFKHILWVFSGRRGVHCWVSDERARKLTVESRR 173
Query: 201 AIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYE 259
AI Y + G +N +KV+ LHP L SY +V ++FE LL + +T ER+
Sbjct: 174 AIVSYLEIIHGGDNMAQKVNLKATLLHPSLALSY-DVCLKYFEPVLLDKMQILATPERWN 232
Query: 260 KILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEE 319
K+L +I DES+ L G W N SS + +W QLK + ++ L+
Sbjct: 233 KVLRIISDESICKSLNGIWSSNPDSSCRE------KWNQLKRAISDDQKP--ALKVLPRN 284
Query: 320 IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLR 379
I+ +TYPRLD VS NHLLK+PFCVHPKTG +C+PIDP CEEFDP VPT+ L++
Sbjct: 285 IILQYTYPRLDSNVSIGLNHLLKSPFCVHPKTGFICVPIDPARCEEFDPHHVPTIDSLIK 344
Query: 380 ELN-----TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
EL+ + ++E+TSLG +++F+ FL + +S +E +
Sbjct: 345 ELDELPPFSQSIGSGGSGDYERTSLGPYVKYFKEQFLDSMSESIRESL 392
>gi|196006934|ref|XP_002113333.1| hypothetical protein TRIADDRAFT_26575 [Trichoplax adhaerens]
gi|190583737|gb|EDV23807.1| hypothetical protein TRIADDRAFT_26575 [Trichoplax adhaerens]
Length = 400
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 178/388 (45%), Positives = 247/388 (63%), Gaps = 29/388 (7%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P + VYY RLFP+ +KW+SYGN K+YF REFSFTL +DIY+R+ SF+ +
Sbjct: 21 PQLMAVYYKRLFPYQLYYKWLSYGN------VSKNYFANREFSFTLKDDIYVRYLSFSDK 74
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+E++ I+++ P KID+G VYS P R+ F P E+EL+FDID+TDYD++R
Sbjct: 75 NEMQKEIQKRSPYKIDLGAVYSFRPKDRNMIKNSS---FQPEEKELVFDIDMTDYDEIRS 131
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGA++C +CWP MTVA+K++D ALR+DFGF H+LWVYSGRRG+HCWVCD AR+L+
Sbjct: 132 CCSGAEICSKCWPFMTVAMKILDAALREDFGFHHLLWVYSGRRGIHCWVCDAAARKLSQS 191
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGP--LHPFLVRSYTEVLREFFEEKLLLSQNLFSTE 255
R AIA+Y + KG E K+V F LHP + R+ + + +FE+ LL QN+ +E
Sbjct: 192 ARSAIAEYLTIIKGGEGHVKRVHFKNQAYLHPSIQRA-LKTIESYFEDLLLKKQNILESE 250
Query: 256 ERYEKILSMIPDESVTSE--------LRGKWQENRRSSNSKEDINFFRWEQLKNTLQSG- 306
E K+L++IPD+++ + L +W + SS K W LK ++
Sbjct: 251 ESSNKVLALIPDKNILKDQIRFYFFSLSEEWNNSGLSSLQK-------WSLLKQKIEKDI 303
Query: 307 -KQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEE 365
K L CV EI +TYPRLD+ VSK NHLLK+PFC+HPKTGRVC+PI D +
Sbjct: 304 VSTKNSVLTHCVAEIQLQYTYPRLDINVSKGINHLLKSPFCIHPKTGRVCVPIPATDIDN 363
Query: 366 FDPTTVPTLSELLRELNTGDSRMDVDNE 393
FDP +VP + L EL+ DS ++ ++E
Sbjct: 364 FDPFSVPNICHLCSELDDSDSNIEKNSE 391
>gi|320169358|gb|EFW46257.1| primase polypeptide 1 [Capsaspora owczarzaki ATCC 30864]
Length = 490
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/415 (43%), Positives = 262/415 (63%), Gaps = 29/415 (6%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+++YY RLFP ++W+SYGN +H YF REFSFTL+ DIY+R+QSF++E +L
Sbjct: 81 MRIYYSRLFPFKKYYRWLSYGNVQKH------YFCNREFSFTLEGDIYVRYQSFSTEEQL 134
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
I ++ P KIDIG VY+V+P K H +G + F E+E++FDID+TDYDD+R CC
Sbjct: 135 RKEIIQRNPIKIDIGAVYNVEP-KDHKQVRGPE--FKAEEKEVVFDIDMTDYDDIRTCCK 191
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GAD+C CWP MT+A++++D ALRDDFGF +LW+YSGRRGVHCWVCD R + R
Sbjct: 192 GADICFRCWPFMTIAVRILDRALRDDFGFKSLLWIYSGRRGVHCWVCDNSVRTYDSNIRT 251
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
+ DY V KG+E + KKV+ PLHP L +S +++ E++E +L Q++ + ++
Sbjct: 252 VLTDYLSVVKGSEKNAKKVALTNPLHPSLQKSL-DIIEEYWEPVILGDQDILRSPAHIDR 310
Query: 261 ILSMIPDES---VTSELRGKWQENRRSSNSKEDINFFRWEQL-KNTLQSGKQKVQGLRRC 316
+L+ IPDE + LR +W + ++ + RW+QL + S K L+
Sbjct: 311 VLATIPDEDNARMRQALRNEWNTHPNGTSQE------RWKQLVQEVYLSVKAGKSYLKST 364
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
V EI+F F YPRLD+EV+K NHLLK+PFCVHPKTGRVC+P+D ++FDP VPT+ E
Sbjct: 365 VPEIMFQFAYPRLDVEVTKGVNHLLKSPFCVHPKTGRVCVPMDVDSIDDFDPFAVPTIQE 424
Query: 377 LLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSS----FLQPLLKSCKEEMESGYK 427
L ++N + D N T GK ++ ++ + F+ P LK E +ES +
Sbjct: 425 LCSQIN----QFDAANPHATTDSGKKLQDYKKTKLKDFMSPFLKFL-EPLESNIR 474
>gi|340518656|gb|EGR48896.1| DNA primase, small subunit [Trichoderma reesei QM6a]
Length = 438
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/425 (44%), Positives = 260/425 (61%), Gaps = 31/425 (7%)
Query: 6 PKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDN 65
P + +P ++ +Y RLFP +F+W+ N P+ D FG REF+FTL N
Sbjct: 13 PLSARLAMPASDPEVMRSFYQRLFPWRQLFQWL---NHSPTPSND---FGNREFAFTLQN 66
Query: 66 DIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIF 125
D YLR+QSF + L + PS+ +IGPVY+ +P R + F P+ +EL F
Sbjct: 67 DAYLRYQSFATADLLRKDVLRLMPSRFEIGPVYTTNPRDRKTLRNS--SAFKPLSKELCF 124
Query: 126 DIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCW 185
DID+TDYDD+R CC A +C +CW MT+AIKV+D ALRDDFGF HI+WVYSGRRG H W
Sbjct: 125 DIDLTDYDDIRTCCDKATICNKCWQFMTMAIKVVDVALRDDFGFKHIMWVYSGRRGAHAW 184
Query: 186 VCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKL 245
VCD KAR L +++R AIA+Y V +G S KKV+ PLHP L RS ++L+ F+E +
Sbjct: 185 VCDKKARSLDDQKRRAIANYLEVIRGGSQSGKKVNVKRPLHPHLSRSL-DILKTHFQEDV 243
Query: 246 LLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQ 304
L Q+ ++T+E+ +K+L ++PD ++ LR KW+ RSS SK W + +
Sbjct: 244 LAVQDPWATDEQAQKLLQLLPDRNLNESLRRKWEAAPGRSSTSK-------WADIDAVAK 296
Query: 305 SGKQK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK 361
+G K + L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID K
Sbjct: 297 TGASKHLDSKALLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTK 356
Query: 362 DCEEFDPTTVPTLSELLRELNT---------GDSRMDVD-NEWEKTSLGKSIRFFRSSFL 411
E+FDP VPT+ LL E+++ GD + V +WEKTSL + FR SF+
Sbjct: 357 ALEDFDPLGVPTVQSLLAEIDSWKGAEDGEDGDDKSHVKIADWEKTSLKPYVEQFR-SFV 415
Query: 412 QPLLK 416
+LK
Sbjct: 416 SGILK 420
>gi|451993317|gb|EMD85791.1| hypothetical protein COCHEDRAFT_1207759 [Cochliobolus
heterostrophus C5]
Length = 500
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 177/415 (42%), Positives = 261/415 (62%), Gaps = 25/415 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P+ ++ +Y RLFP +F+W++ H + F REF+FTL ND YLR+QSF +
Sbjct: 94 DPDVMRAFYQRLFPFRPLFQWLN------HSVTPSNDFAHREFAFTLPNDAYLRYQSFPT 147
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L PS+ +IGP+YS +P R + + F PV +EL+FDID+TDYDD+R
Sbjct: 148 SDLLRKQCISMLPSRFEIGPMYSTNPRDRKTLRKA--SAFRPVMKELVFDIDMTDYDDIR 205
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC+GA +CL+CW +T+AIK ID ALR+DFGF HILWVYSGRRG H WVCD +AR + +
Sbjct: 206 TCCTGASICLKCWGFITMAIKTIDVALREDFGFKHILWVYSGRRGAHAWVCDKRAREMDD 265
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R ++A Y + KG + KKV PLHP L RS E+L+E F+ +L Q+ +++EE
Sbjct: 266 QRRRSVASYLELLKGGDQGGKKVHARRPLHPHLERSL-EILKEHFQTSILAEQDPWASEE 324
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSG--KQKVQGLR 314
+ +L+++PD ++ + L+ KW ++ +W + +SG + + LR
Sbjct: 325 KAAHLLNLLPDPTLKAALQKKWSSAPSRPSAS------KWSDINTLAESGALSKTPRELR 378
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
++I+ +TYPRLD EVSK NHLLK+PF VHP TGRVC+PID + E+FDP +VPT+
Sbjct: 379 EAKQDIILEYTYPRLDAEVSKKLNHLLKSPFVVHPGTGRVCVPIDTRKVEDFDPLSVPTV 438
Query: 375 SELLRELN--TGDSRMDVDNEWEKTSLGKSIRFFR---SSFLQ---PLLKSCKEE 421
++LL+E++ GD +WEKTSL + FF+ + L+ P+LK +EE
Sbjct: 439 TQLLQEIDDWAGDETDKKVQDWEKTSLKPYVDFFKRFVAGLLEEEKPVLKREREE 493
>gi|451850185|gb|EMD63487.1| hypothetical protein COCSADRAFT_90881 [Cochliobolus sativus ND90Pr]
Length = 496
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 178/415 (42%), Positives = 262/415 (63%), Gaps = 25/415 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P+ ++ +Y RLFP +F+W++ H A + F REF+FTL ND YLR+QSF +
Sbjct: 90 DPDVVRAFYQRLFPFRPLFQWLN------HSATPSNDFAHREFAFTLPNDAYLRYQSFPT 143
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L PS+ +IGP+YS +P R + + F PV +EL+FDID+TDYDD+R
Sbjct: 144 SDLLRKQCISMLPSRFEIGPMYSTNPRDRKTLRKA--SAFRPVMKELVFDIDMTDYDDIR 201
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC+GA +CL+CW +T+AIK ID ALR+DFGF HILWVYSGRRG H WVCD AR + +
Sbjct: 202 TCCTGASICLKCWGFITMAIKTIDVALREDFGFKHILWVYSGRRGAHAWVCDKHAREMDD 261
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R ++A Y + KG + + KKV PLHP L RS E+L+E F+ +L Q+ ++++E
Sbjct: 262 QRRRSVASYLELLKGGDQAGKKVHARRPLHPHLERSL-EILKEHFQTSILAEQDPWASDE 320
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSG--KQKVQGLR 314
+ +L+++PD ++ + L+ KW ++ +W + +SG + + LR
Sbjct: 321 KAAHLLNLLPDPTLKAALQKKWSSAPSRPSAS------KWSDINTLAESGALSKTPRELR 374
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
++I+ +TYPRLD EVSK NHLLK+PF VHP TGRVC+PID + E+FDP +VPT+
Sbjct: 375 EAKQDIILEYTYPRLDAEVSKKLNHLLKSPFVVHPGTGRVCVPIDTRKVEDFDPLSVPTV 434
Query: 375 SELLRELN--TGDSRMDVDNEWEKTSLGKSIRFFR---SSFLQ---PLLKSCKEE 421
++LL+E++ TGD +WEKTSL + FF+ + L+ P LK +EE
Sbjct: 435 TQLLQEIDDWTGDETDKKVQDWEKTSLKPYVDFFKRFVAGLLEEEKPALKREREE 489
>gi|406862021|gb|EKD15073.1| eukaryotic and archaeal DNA primase small subunit [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 523
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 184/426 (43%), Positives = 264/426 (61%), Gaps = 31/426 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P +K +Y RLFP +F+W+ N P+ D FG REF+FTL ND YLR+Q+F +
Sbjct: 112 DPEVMKSFYQRLFPWRYLFQWL---NHSPTPSND---FGHREFAFTLQNDAYLRYQAFPT 165
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 166 SDLLRKDVLRLMPSRFEIGPVYSTNPRDRKTLRKSA--AFKPISKELCFDIDLTDYDDIR 223
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW +T+AIKVID ALR+DFGF HI+WVYSGRRG H WVCD KAR + +
Sbjct: 224 TCCDKANICNKCWQFITMAIKVIDVALREDFGFKHIMWVYSGRRGAHAWVCDKKARAMDD 283
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R A+A Y V KG S K+V+ PLH + RS ++L+ F+ +L Q+ + T+E
Sbjct: 284 QKRRAVAGYLEVIKGGAQSGKRVNVKRPLHSHVARSL-DILKSHFQTDILQDQDPWETDE 342
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQKV---QG 312
+++++L ++PD+++ LR KW R+S SK W + ++G K +
Sbjct: 343 KFDRLLQLLPDKTLNEALRKKWSSAPGRASKSK-------WADIDALAKTGASKALDPKA 395
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++IV +TYPRLD+EVSKH NHLLK+PF VHP TGRVC+PI+ K C +FDP VP
Sbjct: 396 LLDAKQDIVLEYTYPRLDIEVSKHLNHLLKSPFVVHPGTGRVCVPINTKHCADFDPLGVP 455
Query: 373 TLSELLRELNT-----GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK-----SCKEEM 422
T++ELL+E++ G++ +WEKTSL + +FR +F+ L+K K E
Sbjct: 456 TVTELLQEIDEWTTPDGENGGKTFQDWEKTSLKPYVEYFR-TFVIALMKDERDVKVKRER 514
Query: 423 ESGYKA 428
+ G A
Sbjct: 515 DEGADA 520
>gi|440632317|gb|ELR02236.1| hypothetical protein GMDG_05309 [Geomyces destructans 20631-21]
Length = 546
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 189/415 (45%), Positives = 252/415 (60%), Gaps = 26/415 (6%)
Query: 4 DGPKQGNVIPDG--FNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSF 61
D P N+ P +P ++ +Y RLFP +F+W+ N P+ D F REF+F
Sbjct: 114 DAPSPINIGPTARASDPEVMRSFYQRLFPWRPLFQWL---NHSPMPSND---FAHREFAF 167
Query: 62 TLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVER 121
TL ND YLR+QSF + L + PS+ +IGPVYS +P R G F P+ +
Sbjct: 168 TLSNDAYLRYQSFPNSELLRRDVLRLMPSRFEIGPVYSTNPRDRKTLR--GSTAFKPIAK 225
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
EL FDID+TDYDDVR CC A++C CW +T+AIKV+D ALRDDFGF HI+WVYSGRRG
Sbjct: 226 ELCFDIDLTDYDDVRTCCDKANICNRCWQFITMAIKVVDVALRDDFGFKHIMWVYSGRRG 285
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H WVCD KAR + + +R AIA Y V KG S KKV+ PLHP L RS E L+ F
Sbjct: 286 AHAWVCDKKARTMDDSRRRAIAGYLEVIKGGAQSGKKVNIKRPLHPHLARSL-ETLKSHF 344
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLK 300
+ +L Q+ ++T+E+ +++L ++PD ++ LR KW RSS SK W +
Sbjct: 345 QADILEDQDPWATQEQADRLLQLLPDRTLNESLRKKWDSAPGRSSASK-------WADID 397
Query: 301 NTLQSGKQKV---QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIP 357
++G K + L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+P
Sbjct: 398 ALAKTGASKSLDPKALLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVP 457
Query: 358 IDPKDCEEFDPTTVPTLSELLRELN--TGDSRMDVDN--EWEKTSLGKSIRFFRS 408
ID + E FDP VPT++ELL E++ TG + N +WEKT L I +FR+
Sbjct: 458 IDTRKLEAFDPLAVPTVTELLGEIDKWTGPEEVKGRNVQDWEKTCLKPYIDYFRT 512
>gi|310801341|gb|EFQ36234.1| eukaryotic and archaeal DNA primase small subunit [Glomerella
graminicola M1.001]
Length = 517
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 185/412 (44%), Positives = 254/412 (61%), Gaps = 29/412 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 105 DPEVMRSFYQRLFPWRYLFQWLN------HSPTPTNDFGHREFAFTLQNDAYLRYQSFAT 158
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + F P+ +EL FDID+TDYD++R
Sbjct: 159 HDLLRKDVLRLMPSRFEIGPVYSTNPRDRKTLRNA--SAFKPLAKELCFDIDLTDYDEIR 216
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C++CW +T+AIKV+D ALRDDFGF HI+WVYSGRRG H WVCD KAR + +
Sbjct: 217 TCCDKANICIKCWQFITMAIKVVDVALRDDFGFKHIMWVYSGRRGAHAWVCDKKARTMGD 276
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+ R +IA Y V KG S KKV+ PLHP L RS E L+ F+E +L +Q+ +++ E
Sbjct: 277 QMRRSIAGYLEVIKGGAQSGKKVNLWRPLHPHLSRSL-ETLKSHFQEDVLEAQDPWASNE 335
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
R E++L ++PD+++ LR KW RSS SK W + +SG K +
Sbjct: 336 RAERLLQLLPDKNLNESLRKKWDAAPGRSSVSK-------WADIDTVAKSGASKNLDAKA 388
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PI+ K E+FDP VP
Sbjct: 389 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPINTKSLEDFDPLGVP 448
Query: 373 TLSELLRELNT--------GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK 416
T+ LL E++ G S+ +WEKTSL + FR SF+ L+K
Sbjct: 449 TVQSLLAEIDAWKGEEDAEGGSQQKSVQDWEKTSLKPYVEQFR-SFVIGLMK 499
>gi|400601699|gb|EJP69324.1| eukaryotic and archaeal DNA primase small subunit [Beauveria
bassiana ARSEF 2860]
Length = 512
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 182/415 (43%), Positives = 256/415 (61%), Gaps = 28/415 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND+YLR+QSF +
Sbjct: 101 DPEVMRSFYQRLFPWRQLFQWLN------HSPTPTNDFGHREFAFTLQNDVYLRYQSFAT 154
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 155 ADLLRKDVLRLLPSRFEIGPVYSTNPRDRKTLRNS--SAFKPLAKELCFDIDLTDYDDIR 212
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW MT+AIKVID ALRDDFGF HI+WVYSGRRG H WVCD KAR + +
Sbjct: 213 TCCDKANICNKCWQFMTMAIKVIDVALRDDFGFQHIMWVYSGRRGAHAWVCDKKARGMDD 272
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G S KKV+ PLHP + RS E+L+ F+E +L QN ++ ++
Sbjct: 273 QKRKAIAGYLEVIRGGAQSGKKVNVRRPLHPHIARSL-EILKSHFQEDVLTVQNPWAADD 331
Query: 257 RYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
R++ +L ++PD ++ LR +W + R+S SK W + ++G K +
Sbjct: 332 RFDALLQLLPDRTLNESLRHRWNASPGRASTSK-------WADIDTLAKTGASKSLDARA 384
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEE---FDPT 369
L+ ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID E FDP
Sbjct: 385 LKEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTSSDESIAAFDPL 444
Query: 370 TVPTLSELLRELNT--GDSRMDVD--NEWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
VPT+ LL E++ GD +WEKTSL + +FR SF+ +++ +E
Sbjct: 445 AVPTVQGLLAEIDAWKGDESEGAPAVADWEKTSLKPHVEYFR-SFVAGIMRDERE 498
>gi|255944379|ref|XP_002562957.1| Pc20g04070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587692|emb|CAP85736.1| Pc20g04070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 504
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 263/433 (60%), Gaps = 47/433 (10%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
P G +P+ + +Y RLFP +F+W+ N G P D FG REF+ TL ND YLR+Q
Sbjct: 67 PSGVDPDIMLAFYQRLFPFRYLFQWL---NHGIVPTKD---FGNREFALTLQNDAYLRYQ 120
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY 132
S+ + I + PS+ +IGPVYS +P R +GG PV +EL+FDID+TDY
Sbjct: 121 SYPTADLFRKDILKMNPSRFEIGPVYSTNPRDRKTL-RGGQ--MKPVSKELVFDIDLTDY 177
Query: 133 DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKAR 192
DD+R CC A++C +CW +T++IKVIDTALR+DFGF+HILWVYSGRRG H WVCD +AR
Sbjct: 178 DDIRTCCVKANICAKCWAFVTMSIKVIDTALREDFGFEHILWVYSGRRGAHAWVCDPRAR 237
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
L +E+R AIA Y + +G S KKV+ PLHP +VRS E+L+ F L Q+ F
Sbjct: 238 NLPDERRRAIAGYLEIVRGGSQSGKKVNIKRPLHPHIVRSL-ELLKHDFARTTLGDQDTF 296
Query: 253 STEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQKV- 310
+ E+ E++LS++PD+++ LR KW + R+S SK W + + ++GK
Sbjct: 297 ESAEQAERLLSLLPDKTLNESLRRKWDSSPDRASTSK-------WADIDSLAKTGKSSTL 349
Query: 311 --QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
LR ++IV +TYPRLD EVSK HLLK+PF +HP TGR+C+PIDP++ E FDP
Sbjct: 350 NPATLRDAKQDIVLEYTYPRLDAEVSKKMIHLLKSPFVIHPGTGRICVPIDPRNAENFDP 409
Query: 369 TTVPTLSELLRELN-------TGDSRMDVDN------------------EWEKTSLGKSI 403
+VPT+ LL E++ G + D+ + ++EKTSL I
Sbjct: 410 LSVPTVMSLLAEIDEYDAKHPAGTAEADIPDVEGSAMNGSDIKGGRKVQDYEKTSLKPYI 469
Query: 404 RFFRSSFLQPLLK 416
FFR SF+ L+K
Sbjct: 470 DFFR-SFIAALIK 481
>gi|449681290|ref|XP_002167763.2| PREDICTED: DNA primase small subunit-like, partial [Hydra
magnipapillata]
Length = 474
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 242/363 (66%), Gaps = 21/363 (5%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
LK YY RLFP+ +KW+ YG D KSYF REFSFTL +DIY+R+ SF +EL
Sbjct: 20 LKQYYKRLFPYKLYYKWLQYGEDS------KSYFENREFSFTLKDDIYIRYLSFADANEL 73
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
E +++K P KIDIG +Y+ P K + Q G VF E+EL+FDID+TDYD VR CCS
Sbjct: 74 EKEMQKKVPYKIDIGAIYNYKP-KDNKQLQAG--VFKAEEKELVFDIDMTDYDTVRTCCS 130
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC +CWPLMTVA+K++D AL +DFGF+H LWVYSGRRG+HCWV D +AR+L+ + R
Sbjct: 131 GASVCNKCWPLMTVALKILDRALEEDFGFEHRLWVYSGRRGIHCWVADLRARKLSQQGRS 190
Query: 201 AIADYFRVYKGNENSNKKVSFPG-PLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYE 259
A+A+Y V KG + KKV F G LHP + + +++++F E L+ Q++ + E+ +
Sbjct: 191 AVAEYLSVIKGGDAQAKKVHFKGNSLHPSIACA-ASLIKKYFTENYLVDQDILDSVEQQK 249
Query: 260 KILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEE 319
+L +IPDES ++ W S+ K W++L+N + K + +EE
Sbjct: 250 IMLKLIPDESTRDKVEAVWNHEILSTVEK-------WKKLENLVLD---KSFNNKHTLEE 299
Query: 320 IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLR 379
I+F + YPRLD+ V+K NHLLK+PFCVHPKTGRVC+PIDP E FDP+ VPT+S+L +
Sbjct: 300 IMFQYVYPRLDINVTKGLNHLLKSPFCVHPKTGRVCVPIDPSTAENFDPSKVPTISQLFQ 359
Query: 380 ELN 382
EL+
Sbjct: 360 ELD 362
>gi|389640911|ref|XP_003718088.1| DNA primase small subunit [Magnaporthe oryzae 70-15]
gi|351640641|gb|EHA48504.1| DNA primase small subunit [Magnaporthe oryzae 70-15]
Length = 529
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 191/431 (44%), Positives = 263/431 (61%), Gaps = 39/431 (9%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W+ N +P D F REF+FTL ND YLR+QSF +
Sbjct: 112 DPEVMRSFYQRLFPWRYLFQWL---NHSPNPTND---FAHREFAFTLQNDAYLRYQSFTT 165
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P +R + F P+ +EL FDID+TDYDD+R
Sbjct: 166 SDLLRKDVLRLMPSRFEIGPVYNTNPRERKTLRNS--SAFKPLAKELCFDIDLTDYDDIR 223
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW MT+AIK +D ALRDDFGF HI+WVYSGRRG H WVCD KAR + +
Sbjct: 224 TCCDKANICNKCWQFMTMAIKTVDVALRDDFGFKHIMWVYSGRRGAHAWVCDKKARVMDD 283
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G S KKV+ PLHP L RS +VL+ F+E +L +Q+ + +EE
Sbjct: 284 QKRRAIAGYLEVVRGGAQSGKKVNVRRPLHPHLSRSL-DVLKGHFQEDVLRAQDPWESEE 342
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
+ EK+L ++PD ++ LR KW + RSS SK W + ++G + +
Sbjct: 343 QAEKLLQLLPDRTLNDSLRKKWASSPGRSSLSK-------WADIDTVAKTGASRNLDAKA 395
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID K+ E+FDP VP
Sbjct: 396 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTKNLEDFDPLGVP 455
Query: 373 TLSELLRELNT----------GD--SRMDVDNEWEKTSLGKSI---RFFRSSFLQ----P 413
T+ ELL E++ GD + +WEKTSL I R F S+ ++ P
Sbjct: 456 TVQELLEEIDAWKQPEVKKEQGDDAAAQRPMQDWEKTSLKPHIDQFRVFVSALMKDERDP 515
Query: 414 LLKSCKEEMES 424
+K +EE ES
Sbjct: 516 KIKREREEAES 526
>gi|380496045|emb|CCF31931.1| eukaryotic and archaeal DNA primase small subunit [Colletotrichum
higginsianum]
Length = 496
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/413 (45%), Positives = 253/413 (61%), Gaps = 30/413 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W+ N P D F REF+FTL ND YLR+QSF +
Sbjct: 83 DPEVMRSFYQRLFPWRYLFQWL---NHSPSPTND---FAHREFAFTLQNDAYLRYQSFPT 136
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + F P+ +EL FDID+TDYD++R
Sbjct: 137 HDLLRKDVLRLMPSRFEIGPVYSTNPRDRKTLRNA--SAFKPLAKELCFDIDLTDYDEIR 194
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C++CW +T+AIKV+D ALRDDFGF HI+WVYSGRRG H WVCD KAR + +
Sbjct: 195 TCCDKANICIKCWQFITMAIKVVDVALRDDFGFKHIMWVYSGRRGAHAWVCDKKARTMGD 254
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+ R +IA Y V KG S KKV+ PLHP + RS E L+ F+E +L +Q+ +++ E
Sbjct: 255 QLRRSIAGYLEVIKGGAQSGKKVNLWRPLHPHVARSL-ETLKSHFQEDVLEAQDPWASNE 313
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
R E++L ++PD+++ LR KW RSS SK W + +SG K +
Sbjct: 314 RAERLLQLLPDKNLNESLRKKWDAAPGRSSVSK-------WADIDTVAKSGASKNLDAKA 366
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID + E+FDP VP
Sbjct: 367 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTRTLEDFDPLGVP 426
Query: 373 TLSELLRELNTGDSRMDVD---------NEWEKTSLGKSIRFFRSSFLQPLLK 416
T+ LL E++ S D D +WEKTSL + FR SF+ L+K
Sbjct: 427 TVQSLLAEIDAWKSDEDADAGGSQQKSVQDWEKTSLKPYVEQFR-SFVIGLMK 478
>gi|429857863|gb|ELA32703.1| DNA primase small subunit [Colletotrichum gloeosporioides Nara gc5]
Length = 504
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/408 (44%), Positives = 254/408 (62%), Gaps = 23/408 (5%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 94 DPEIMRSFYQRLFPWRYLFQWLN------HSPSPTNDFGHREFAFTLQNDAYLRYQSFAT 147
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 148 HDLLRKDVLRLMPSRFEIGPVYSTNPRDRKTLRNA--SAFKPLAKELCFDIDLTDYDDIR 205
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C++CW +T+AIKV+D ALRDDFGF HI+WVYSGRRG H WVCD KAR + +
Sbjct: 206 TCCDKANICIKCWQFITMAIKVVDVALRDDFGFKHIMWVYSGRRGAHAWVCDKKARTMGD 265
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+ R +IA Y V KG S KKV+ PLHP + RS + L F+E +L +Q+ +++ E
Sbjct: 266 QMRRSIAGYLEVIKGGAQSGKKVNLWRPLHPHVQRSL-DTLMPHFQEDVLENQDPWASNE 324
Query: 257 RYEKILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLR 314
R E++L ++PD+++ LR KW + R S N DI+ + T K +GL
Sbjct: 325 RAERLLQLLPDKTLIDNLRKKWDASPGRSSINKWADID-----AVAKTSAGKKFDARGLL 379
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
++I+ +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID K+ E+FDP +VPT+
Sbjct: 380 DAKQDILLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTKNLEDFDPLSVPTV 439
Query: 375 SELLRELNT------GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK 416
LL E++ GD +WEKTSL + FR SF+ L+K
Sbjct: 440 QGLLAEIDAWKGEEEGDGAQKSVQDWEKTSLKPYVEQFR-SFVIGLMK 486
>gi|60102672|gb|AAX14023.1| DNA primase [Monascus pilosus]
Length = 535
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 196/459 (42%), Positives = 270/459 (58%), Gaps = 55/459 (11%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
P + + + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+Q
Sbjct: 89 PSKVDTDTMLAFYQRLFPFRHLFQWL---NHGIVPSVD---FGNREFALTLQNDAYLRYQ 142
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY 132
S+ + I PS+ +IGPVYS +P R +GG PV +EL+FDID+TDY
Sbjct: 143 SYATADLFRKDILRINPSRFEIGPVYSANPRDRKTL-RGGQ--MKPVSKELVFDIDLTDY 199
Query: 133 DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKAR 192
DD+R CC A++C +CW +T+AIKVIDTALRDDFGF+HILWVYSGRRG H WVCD +AR
Sbjct: 200 DDIRSCCEKANICAKCWSFVTMAIKVIDTALRDDFGFEHILWVYSGRRGAHAWVCDARAR 259
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
L +++R AIA Y + +GN S K+V+ PLHP + RS E+L+ +F + L Q+ F
Sbjct: 260 NLPDDRRRAIAGYLDIVRGNTMSGKRVNMKRPLHPHVSRSL-EILKTYFRQTTLDDQDTF 318
Query: 253 STEERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
++ E++LS++P++ +T LR KW R S+ DI+ NTL S
Sbjct: 319 LDPKQVERLLSLLPNKPLTDALRKKWDSAPGRSSAKKWSDIDALARAGESNTLSSA---- 374
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
L ++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PIDPK E+FDP +
Sbjct: 375 -ALGEAKQDIVLEYTYPRLDSEVSKKMIHLLKSPFVIHPGTGRVCVPIDPKRPEQFDPLS 433
Query: 371 VPTLSELLRELN-------------TGDSRMDVD--------------------NEWEKT 397
VPT++ELL E++ GD+ DV ++EKT
Sbjct: 434 VPTVTELLAEIDKWDAEHSSGAAGVNGDADADVVEGEVGSAIPGSSDARGPRRLQDYEKT 493
Query: 398 SLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQTKNS 436
SL I +FR SF+ LLK E SG + + +++ N+
Sbjct: 494 SLKPYIDYFR-SFVANLLK----EERSGKRERNEESSNA 527
>gi|426224923|ref|XP_004006618.1| PREDICTED: DNA primase small subunit [Ovis aries]
Length = 418
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 270/420 (64%), Gaps = 36/420 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYGQYYRWLNYG------GVVKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI +ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIHIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FE+ L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-VRKSINIIKKYFEQYALVDQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ EL+ +Q R SNS + RWE LKNT+ + QK +C
Sbjct: 240 WDKILALVP-ETMRDELQQGFQ---RHSNSLQ-----RWENLKNTI-NKYQKNNKNDKCG 289
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT
Sbjct: 290 PWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPT 349
Query: 374 LSELLRELNTGDSRMDVDN-----------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
+S + EL+ ++ + +N +++KTSL ++ F FL+ L KS K E+
Sbjct: 350 ISSICHELDVISTKEEKENGAESDIKHRTRDYKKTSLAPFVKIF-EQFLENLDKSRKGEL 408
>gi|189210964|ref|XP_001941813.1| DNA primase small subunit [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977906|gb|EDU44532.1| DNA primase small subunit [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 486
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 176/398 (44%), Positives = 253/398 (63%), Gaps = 25/398 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P+ ++ +Y RLFP +F+W++ H A + F REF+FTL ND YLR+QSF +
Sbjct: 80 DPDVMRAFYQRLFPFRPLFQWLN------HSATPSNDFAHREFAFTLPNDAYLRYQSFPT 133
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L PS+ +IGP+YS +P R + + F P+ +EL+FDID+TDYDD+R
Sbjct: 134 ADLLRKQCINMLPSRFEIGPMYSTNPRDRKTLRKA--SAFRPLMKELVFDIDMTDYDDIR 191
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC+GA +CL+CW +T+AIK ID ALR+DFGF HILWVYSGRRG H WVCD +AR + +
Sbjct: 192 TCCTGASICLKCWGFITMAIKTIDVALREDFGFKHILWVYSGRRGAHAWVCDKRAREMDD 251
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y + KG + KKV PLHP L RS +L+E F+ +L Q+ +++EE
Sbjct: 252 QKRRAIAGYLELLKGGDQGGKKVMARRPLHPHLERSLA-ILKEHFQTSILADQDPWASEE 310
Query: 257 RYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSG--KQKVQG 312
+ +L++IPD S+ + L+ KW NR S++ +W + +SG + +
Sbjct: 311 KAAHLLTLIPDTSLRAALQKKWDSAPNRPSAS--------KWSDIDALAKSGHLSKSPKD 362
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++I+ +TYPRLD EVSK NHLLK+PF +HP TGRVC+PID + E+FDP +VP
Sbjct: 363 LLEAKQDIILEYTYPRLDAEVSKKLNHLLKSPFVIHPGTGRVCVPIDTRTVEDFDPLSVP 422
Query: 373 TLSELLRELNT---GDSRMDVDNEWEKTSLGKSIRFFR 407
T+++LL E++ GD V +W+KTSL + FFR
Sbjct: 423 TITQLLGEIDEWKGGDDGKKV-QDWDKTSLKPYVDFFR 459
>gi|270483790|ref|NP_001139337.1| DNA primase small subunit [Bos taurus]
gi|296487555|tpg|DAA29668.1| TPA: primase, DNA, polypeptide 1 (49kDa) [Bos taurus]
Length = 418
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 272/420 (64%), Gaps = 36/420 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYGQYYRWLNYG------GVVKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI +ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIHIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FE+ L+ Q++ ++
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-VRKSINIIKKYFEQYALVDQDILENKQS 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC- 316
++KIL+++P E+V EL+ +Q R SNS + RWE LKNT+ + QK +C
Sbjct: 240 WDKILALVP-ETVRDELQQGFQ---RQSNSPQ-----RWETLKNTI-NKYQKNNKNDKCG 289
Query: 317 --VE-EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
+E EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT
Sbjct: 290 LWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPT 349
Query: 374 LSELLRELNTGDSRMDVDN-----------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
+S + EL+ ++ + +N ++++TSL ++ F FL+ L KS K E+
Sbjct: 350 ISSICHELDVISTKEEKENGTESDTKHRTRDYKRTSLAPFVKVF-EQFLENLDKSRKGEL 408
>gi|432866543|ref|XP_004070855.1| PREDICTED: DNA primase small subunit-like [Oryzias latipes]
Length = 426
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 183/423 (43%), Positives = 268/423 (63%), Gaps = 38/423 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFP + ++W++YG K+YF REFSFTL +DIY+R+QSF+++
Sbjct: 14 PDLLPLYYRRLFPFSQYYRWLNYG------GVQKNYFQNREFSFTLKDDIYVRYQSFSTQ 67
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ELE +++ P KIDIG VYS P + + G F +E+EL+FDID+TDYDDVR
Sbjct: 68 NELEKEMQKMNPYKIDIGAVYSHRPNQHNTVKSGS---FQALEKELVFDIDMTDYDDVRT 124
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI ++D ALRDDFGF H+LWVYSGRRGVHCWVCD AR+L+
Sbjct: 125 CCSAADICSKCWTLMTIAIHILDRALRDDFGFQHLLWVYSGRRGVHCWVCDEAARKLSAA 184
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R A+A+Y + KG E + KKV P+HPF+ S EV+ ++F E + Q++ +E
Sbjct: 185 GRSAVAEYLSLVKGGEETVKKVVLTDPIHPFISAS-LEVVEKYFLEYAVQDQDILGRKEC 243
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
+K+L+++P E V +EL+ K + ++ W+ +KN ++ + V+ +
Sbjct: 244 VDKVLALVP-EDVRNELQTKMKGVKQPEK--------LWKMIKNEAKNKQGTVKKGQHFE 294
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
+EI+ + YPRLD+ VSK NHLLK+PF VHPKTGR+ +PID K+ + FDP VPT+S +
Sbjct: 295 KEIMLQYCYPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDLKEVDSFDPFVVPTISRI 354
Query: 378 LRELN-------TGDSRMDVDNE-----------WEKTSLGKSIRFFRSSFLQPLLKSCK 419
EL+ + D +NE +++TSL K +++F SFL + +S K
Sbjct: 355 CEELDRPRTEEEKSEESQDKENEKDAVETRKMRDYKRTSLAKYVKYF-DSFLDGMTRSWK 413
Query: 420 EEM 422
E+
Sbjct: 414 GEL 416
>gi|330915323|ref|XP_003296983.1| hypothetical protein PTT_07247 [Pyrenophora teres f. teres 0-1]
gi|311330584|gb|EFQ94920.1| hypothetical protein PTT_07247 [Pyrenophora teres f. teres 0-1]
Length = 501
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 177/410 (43%), Positives = 260/410 (63%), Gaps = 26/410 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P+ ++ +Y RLFP +F+W++ H A + F REF+FTL ND YLR+QSF +
Sbjct: 94 DPDVMRAFYQRLFPFRPLFQWLN------HSATPSNDFAHREFAFTLPNDAYLRYQSFPT 147
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
+ PS+ +IGP+YS +P R + + F P+ +EL+FDID+TDYDD+R
Sbjct: 148 ADLMRKQCISMLPSRFEIGPMYSTNPRDRKTLRKA--SAFRPLMKELVFDIDMTDYDDIR 205
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC+GA++CL+CW +T+AIK ID ALR+DFGF HILWVYSGRRG H WVCD +AR + +
Sbjct: 206 TCCTGANICLKCWGFITMAIKTIDVALREDFGFKHILWVYSGRRGAHAWVCDKRAREMDD 265
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y + KG + KKV PLHP L RS +L+E F+ +L Q+ +++EE
Sbjct: 266 QKRRAIAGYLELLKGGDQGGKKVMARRPLHPHLERSLA-ILKEHFQTSILADQDPWASEE 324
Query: 257 RYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSG--KQKVQG 312
+ +L++IPD ++ + L+ KW NR S++ +W + +SG + +
Sbjct: 325 KAAHLLTLIPDTTLRAALQKKWDSAPNRPSAS--------KWSDIDALAKSGHLSKSPKD 376
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++I+ +TYPRLD EVSK NHLLK+PF +HP TGRVC+PID + E+FDP +VP
Sbjct: 377 LLEAKQDIILEYTYPRLDAEVSKKLNHLLKSPFVIHPGTGRVCVPIDTRTVEDFDPLSVP 436
Query: 373 TLSELLRELNT---GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCK 419
T+++LL E++ GD V +W+KTSL + FFR F+ L++ K
Sbjct: 437 TVTQLLGEIDEWKGGDEGKKV-QDWDKTSLKPYVDFFR-KFVAALIEEEK 484
>gi|315047580|ref|XP_003173165.1| DNA primase small subunit [Arthroderma gypseum CBS 118893]
gi|311343551|gb|EFR02754.1| DNA primase small subunit [Arthroderma gypseum CBS 118893]
Length = 518
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/431 (43%), Positives = 259/431 (60%), Gaps = 44/431 (10%)
Query: 6 PKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDN 65
P + P +P + +Y RLFP +F+W+ N G P+ D FG REF+FTL N
Sbjct: 78 PDKPAPPPAQVDPESISAFYQRLFPFKYLFQWL---NHGVKPSTD---FGNREFAFTLPN 131
Query: 66 DIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIF 125
D YLR+QSF + L + PS+ +IGPVYS +P R + G F P+ +EL+F
Sbjct: 132 DAYLRYQSFQTADALHKDVMRLNPSRFEIGPVYSTNPRDRKTLRKPG--AFKPIMKELVF 189
Query: 126 DIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCW 185
DID+TDYDD+R CCS A++CL+CW +T++IKVIDTALR+DFGF HILWVYSGRRG H W
Sbjct: 190 DIDLTDYDDIRTCCSKANICLKCWAFVTMSIKVIDTALREDFGFQHILWVYSGRRGAHAW 249
Query: 186 VCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKL 245
VCD KAR L +++R AIA Y V +G S K+V+ PLHP + RS + LRE+F +
Sbjct: 250 VCDKKARNLPDDRRRAIAGYLEVVRGGSQSGKRVNLKRPLHPHITRS-IDTLREYFASTV 308
Query: 246 LLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQ 304
L+ Q+ FS ++ ++L ++PD+++ + L+ KW+ RSS+SK W + +
Sbjct: 309 LVDQDPFSKPDQAARLLELLPDKTLRAALQKKWESAPGRSSSSK-------WADIDAVAK 361
Query: 305 SGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKD 362
+ + + + L ++IV +TYPRLD EVSK HLLK+PF VHP TGRVC+PID +
Sbjct: 362 TSSRGLDTKALLEAKQDIVLEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDVEK 421
Query: 363 CEEFDPTTVPTLSELLRELN--------------TGDSRMDVD-----------NEWEKT 397
++FDP PTL +LL E+N T DS D ++EKT
Sbjct: 422 VDDFDPLETPTLFQLLDEINSWNPSQNNQQDHMPTSDSGSGQDEGDTAPKPKKIQDYEKT 481
Query: 398 SLGKSIRFFRS 408
SL I +FRS
Sbjct: 482 SLKPYIDYFRS 492
>gi|347827090|emb|CCD42787.1| similar to DNA primase small subunit [Botryotinia fuckeliana]
Length = 527
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/431 (42%), Positives = 267/431 (61%), Gaps = 30/431 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W+ N P+ D FG REF+FTL ND YLR+Q+F +
Sbjct: 119 DPEVMRSFYQRLFPWRHLFQWL---NHSPTPSTD---FGHREFAFTLQNDAYLRYQAFPT 172
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + + F P+ +EL FDID+TDYD++R
Sbjct: 173 SDLLRKDVLRLMPSRFEIGPVYSTNPRDRKTLRKS--SAFRPIAKELCFDIDLTDYDEIR 230
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW +T+AIKV+D ALRDDFGF HI+WVYSGRRG H WVCD KAR++ +
Sbjct: 231 TCCDKANICNKCWQFITMAIKVVDVALRDDFGFKHIMWVYSGRRGAHAWVCDKKARQMDD 290
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G + KKV+ PLHP ++RS ++L+ F+ +L Q+ + ++
Sbjct: 291 QKRRAIAGYLEVIRGGSQTAKKVNVKRPLHPHVLRSL-DILKGHFQNDILHDQDPWEEDD 349
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQ-KVQGLR 314
+ +K+L ++PD ++ LR KW RSS SK W + +S K + L
Sbjct: 350 KIDKLLQLLPDRTLNESLRKKWSSAPGRSSTSK-------WADIDALAKSTKGLDPRALL 402
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
++IV +TYPRLD+EVSKH NHLLK+PF VHP TGRVC+PID + +FDP VPT+
Sbjct: 403 EAKQDIVLEYTYPRLDIEVSKHLNHLLKSPFVVHPGTGRVCVPIDTRHVGDFDPLAVPTV 462
Query: 375 SELLRELN------TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
+ELL E++ GD +WEKTSL + +FR SF+ ++K ES K
Sbjct: 463 TELLGEIDQWTPPEAGDLDGKSIQDWEKTSLKPYVDYFR-SFVAAVMKD-----ESDIKI 516
Query: 429 KIQQTKNSLSW 439
K ++ +++++
Sbjct: 517 KRERDTDAMAF 527
>gi|346327083|gb|EGX96679.1| DNA primase small subunit [Cordyceps militaris CM01]
Length = 517
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/438 (43%), Positives = 264/438 (60%), Gaps = 39/438 (8%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 100 DPEVMRSFYQRLFPWRQLFQWLN------HSPTPTNDFGNREFAFTLQNDAYLRYQSFAT 153
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 154 ADLLRKDVLRLMPSRFEIGPVYTTNPRDRKTLRNS--SAFKPLAKELCFDIDLTDYDDIR 211
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW MT+AIKV+D ALRDDFGF HILWVYSGRRG H WVCD KAR + +
Sbjct: 212 TCCDKANICTKCWTFMTMAIKVVDVALRDDFGFQHILWVYSGRRGAHAWVCDKKARSMDD 271
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+R AIA Y V +G+ KKV+ PLHP L RS E+L+ F+ +L Q+ +ST+E
Sbjct: 272 AKRKAIAGYLEVVRGSAQGGKKVNVKRPLHPHLSRSL-EILKTHFQHDVLGVQDPWSTDE 330
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQ----KVQ 311
R EK+L +IPD +++ LR KW R+S +K W + +SG
Sbjct: 331 RAEKLLHLIPDRTLSESLRRKWDAAPGRASAAK-------WADIDAVAKSGGAGKSLDTL 383
Query: 312 GLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKD---CEEFDP 368
L+ ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID E FDP
Sbjct: 384 ALKEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTSSDDTVEAFDP 443
Query: 369 TTVPTLSELLRELN---------TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCK 419
VPT+ LL E++ + DS V +WEKTSL + +FR SF+ ++ +
Sbjct: 444 LAVPTVQGLLAEIDAWQGKNGEGSADSAPAV-ADWEKTSLKPYLEYFR-SFVAGIM---R 498
Query: 420 EEMESGYKAKIQQTKNSL 437
EE E+ + K +Q ++S+
Sbjct: 499 EEREAA-RVKREQEEHSM 515
>gi|410900069|ref|XP_003963519.1| PREDICTED: DNA primase small subunit-like, partial [Takifugu
rubripes]
Length = 453
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/432 (42%), Positives = 265/432 (61%), Gaps = 38/432 (8%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIY 68
NV P+ L +YY RLFP + ++W++YG K+YF REFSFTL +DIY
Sbjct: 3 SNVFDSANLPDLLPLYYRRLFPFSLYYRWLTYG------GLQKNYFQNREFSFTLKDDIY 56
Query: 69 LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDID 128
+R+QSF++++ELE +++ P K+DIG VYS P + + G F +E+EL+FDID
Sbjct: 57 VRYQSFSTQTELEKEMQKINPYKVDIGAVYSHRPIQHNTVKSG---TFQALEKELVFDID 113
Query: 129 ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
+TDYDDVR CCS AD+C +CW LMT+AI+++D ALR+DFGF H+LWVYSGRRGVHCWVCD
Sbjct: 114 MTDYDDVRSCCSAADICSKCWTLMTIAIRILDRALREDFGFQHLLWVYSGRRGVHCWVCD 173
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
AR+L+ R A+A+Y + KG + + KKV P+HPF +R V+ ++F + +
Sbjct: 174 EAARKLSVAARSAVAEYLSLVKGGDETVKKVVLTDPIHPF-IRESLAVVEKYFTQYAIHD 232
Query: 249 QNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQ 308
Q++ +E EK+L+++P E V EL+ +Q R+ N RW Q++N +
Sbjct: 233 QDILGQKESVEKVLALVP-EDVRKELQQDFQNERKPEN--------RWTQIRNQAIKKQG 283
Query: 309 KVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+ + +EI+ + YPRLD+ VSK NHLLK+PF VHPKTGR+ +PID ++ + FDP
Sbjct: 284 AAKKGQHFEKEIMLQYCYPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDLEELDSFDP 343
Query: 369 TTVPTLSELLRELN-----TGDSRMDVDNEWEK-------------TSLGKSIRFFRSSF 410
VPT+S + EL+ D ++D E EK TSL K ++ F F
Sbjct: 344 FAVPTISLICEELDRPRRGEEDEKLDDTKENEKDAAERRKIRDYKRTSLAKYVKHF-DQF 402
Query: 411 LQPLLKSCKEEM 422
L + +S K ++
Sbjct: 403 LAQMAQSWKGDL 414
>gi|170028027|ref|XP_001841898.1| DNA primase small subunit [Culex quinquefasciatus]
gi|167868368|gb|EDS31751.1| DNA primase small subunit [Culex quinquefasciatus]
Length = 429
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 259/421 (61%), Gaps = 32/421 (7%)
Query: 14 DGFNP----NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYL 69
D F+P + L +YY RLFPH ++WMSYG + S F REFSFTL +DIY+
Sbjct: 13 DKFDPASLNDLLPLYYRRLFPHLQFYRWMSYG------LSEPSVFTNREFSFTLQDDIYI 66
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R+QSF ++SELE I K PSKIDIG V++V P A V PV+REL+FDID+
Sbjct: 67 RYQSFENQSELEKEICAKNPSKIDIGAVFNVRPKDHRA-----STVMKPVQRELVFDIDM 121
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
TDYD++R CCS A+VC +CW MT+A K+ID ALR+DFGF+H+LWV+SGRRG+HCW+ D
Sbjct: 122 TDYDEIRTCCSEANVCPKCWKFMTIACKIIDAALREDFGFEHLLWVFSGRRGIHCWISDK 181
Query: 190 KARRLTNEQRGAIADYFRVY-KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
AR L R A+A+Y + G E + KV+ V+ ++ +FEE L+
Sbjct: 182 VARYLDTRGRAAVAEYLNILISGGEGTVTKVNINTDRMHHAVKRAHRIIEPYFEEICLVD 241
Query: 249 QNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNS--KEDINFFRWEQLKNTLQSG 306
Q++F T K+L+M+ D+ +L K + + S + K +NFF ++ +G
Sbjct: 242 QDMFGTPNGLRKLLAMVQDDGARMDLDKKLKPHEGDSKAIWKAFVNFFEARRI-----TG 296
Query: 307 KQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEF 366
K + + LR VEE+ A TYPR+D+ VSK NHLLKAPFCVHPKTG+VCIP +P ++F
Sbjct: 297 KNRNRKLRHVVEEVQLAVTYPRIDINVSKGFNHLLKAPFCVHPKTGKVCIPFNPNVADKF 356
Query: 367 DPTTVPTLSELLRELNTGDSRMDVDNE--------WEKTSLGKSIRFFRSSFLQPLLKSC 418
DPT VPT++ LL E+N D ++ D E ++KTS+ K F FL+ L ++
Sbjct: 357 DPTQVPTITGLLNEINAFDEKLSADGETERSRIKDYKKTSMFKGTVIF-EEFLRKLEQTF 415
Query: 419 K 419
K
Sbjct: 416 K 416
>gi|402080714|gb|EJT75859.1| DNA primase small subunit [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 504
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/413 (44%), Positives = 252/413 (61%), Gaps = 29/413 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +++W+ N P D FG REF+FTL ND YLR+QSF +
Sbjct: 91 DPEVMRSFYQRLFPWRYLYQWL---NHSPSPTND---FGHREFAFTLQNDAYLRYQSFPT 144
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P R F P+ +EL FDID+TDYD++R
Sbjct: 145 SDHLRKDVLRLNPSRFEIGPVYTTNPRDRKTLRNSA--AFKPLTKELCFDIDLTDYDEIR 202
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C CW MT+AIK +D ALR+DFGF HI+WVYSGRRG H WVCD R + +
Sbjct: 203 TCCDKANICNRCWKFMTMAIKTVDVALREDFGFRHIMWVYSGRRGAHAWVCDKNVRSMDD 262
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G S KKV+ PLHP L RS ++L+ F+E +L QN + T E
Sbjct: 263 QKRRAIAGYLEVIRGGAQSGKKVNVRRPLHPHLTRSL-DILKTHFQEDVLRDQNPWDTNE 321
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
+ EK+L ++PD ++ LR KW + RSS SK W + ++G + +
Sbjct: 322 QAEKLLQLLPDRTLNDSLRKKWASSPGRSSASK-------WADIDAVAKTGASRALDAKA 374
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID ++ EEFDP VP
Sbjct: 375 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTRNLEEFDPLEVP 434
Query: 373 TLSELLRELN---TGDSRMD-----VDNEWEKTSLGKSIRFFRSSFLQPLLKS 417
T+ LL+E++ T +S D +WEKTSL I FR +F+ L+K+
Sbjct: 435 TVQSLLQEIDDWKTPESDADGSQGKTTQDWEKTSLKPYIEQFR-AFVSALMKA 486
>gi|157104474|ref|XP_001648424.1| DNA primase [Aedes aegypti]
gi|108869184|gb|EAT33409.1| AAEL014314-PA [Aedes aegypti]
Length = 428
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 264/423 (62%), Gaps = 33/423 (7%)
Query: 12 IPDGFNP----NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDI 67
+ + FNP + L +YY RLFPH ++WMSYG + S F REFSFTL +DI
Sbjct: 11 VIEKFNPESMQDLLPIYYKRLFPHMQFYRWMSYG------LSEPSVFTNREFSFTLQDDI 64
Query: 68 YLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDI 127
Y+R+QSF ++SELE I K P KIDIG VY+V P A V PV+REL+FDI
Sbjct: 65 YIRYQSFENQSELEKEICSKNPFKIDIGAVYNVRPKDHRA-----STVMKPVQRELVFDI 119
Query: 128 DITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVC 187
D+TDYD++R CC+ A+VC +CW MT+A K+ID ALR+DFGF+H+LWV+SGRRG+HCWVC
Sbjct: 120 DMTDYDEIRTCCNEANVCTKCWKFMTIACKIIDAALREDFGFEHLLWVFSGRRGIHCWVC 179
Query: 188 DGKARRLTNEQRGAIADYFRVY-KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLL 246
D AR L ++ R ++A+Y + G E S +V+ +H + R++ +++ FFEE L
Sbjct: 180 DKSARHLDSKGRSSVAEYLHILISGGEGSVTRVTLGDRMHHSIKRAH-KIIEPFFEEICL 238
Query: 247 LSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR--WEQLKNTLQ 304
+ QN+F T + K+L+M+ DE V +L K + + NSK F +E L+
Sbjct: 239 VEQNMFGTPDGLRKLLAMVQDEGVRLDLDRKLKPH--VGNSKALWKAFEAFFESLR---V 293
Query: 305 SGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
SG+ K + + +EE AFTYPR+D+ VSK NHLLKAPFCVHPKTG+VC+P +P E
Sbjct: 294 SGQNKGRRFKHIIEETQLAFTYPRIDINVSKGFNHLLKAPFCVHPKTGKVCVPFNPNVAE 353
Query: 365 EFDPTTVPTLSELLRELNTGDSRMDVDNE--------WEKTSLGKSIRFFRSSFLQPLLK 416
+FDPT VP ++ LL E++ D + E ++KTS+ K F FL+ L +
Sbjct: 354 KFDPTQVPNITVLLNEVSAFDQKQTAGGEEERSRIKDYKKTSMFKGTVIF-EEFLRKLEQ 412
Query: 417 SCK 419
+ K
Sbjct: 413 TFK 415
>gi|148237548|ref|NP_001080819.1| primase, DNA, polypeptide 1 (49kDa) [Xenopus laevis]
gi|29612475|gb|AAH49395.1| Dnapol-alpha50-prov protein [Xenopus laevis]
Length = 420
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 267/419 (63%), Gaps = 34/419 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFP F+W++YG K+YF REFSFTL +D+Y+R+QSFN++
Sbjct: 12 PDVLPLYYRRLFPFYQYFRWLNYG------GVVKNYFQHREFSFTLKDDVYVRYQSFNNQ 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ CP KIDIG VYS P+ + G F E+EL+FDID+TDYDDVR
Sbjct: 66 SELEKEMQKMCPYKIDIGAVYSHRPSLHNTVKSG---TFQAQEKELVFDIDMTDYDDVRR 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A++++D AL +DFGF H LWVYSGRRGVHCWVCD AR+L+
Sbjct: 123 CCSSADICPKCWTLMTIAVRILDRALAEDFGFKHRLWVYSGRRGVHCWVCDDSARKLSQA 182
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
+R A+A+Y V KG E + KKV P +HPF+ +S V R +FE+ L+ Q++ ++
Sbjct: 183 ERSAVAEYLSVVKGGEETIKKVQLPETIHPFIGKSLKMVER-YFEKYALVDQDILENKQC 241
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++K+++++P+ + S LR E ++ +S E RW++L + L++ + +
Sbjct: 242 WDKVIALVPEVARESLLR----EFSKARSSVE-----RWDKLSSCLEATGKDFRRYSNIP 292
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
+EI+ F YPRLD+ VSK NHLLK+PF VHPKTGR+ +PID K ++FDP +VPT+S +
Sbjct: 293 KEIMLQFCYPRLDVNVSKGLNHLLKSPFSVHPKTGRISVPIDCKKLDQFDPFSVPTISLI 352
Query: 378 LREL-NTGDSRMDVDN-------------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
EL N D D+ ++++TSL I+ F FL L +S K E+
Sbjct: 353 CSELDNVSKKEEDEDSAGEGEPEAKKRTRDYKRTSLAPYIKVF-EQFLDKLDQSRKGEL 410
>gi|336467573|gb|EGO55737.1| DNA primase small subunit [Neurospora tetrasperma FGSC 2508]
gi|350287775|gb|EGZ69011.1| DNA primase small subunit [Neurospora tetrasperma FGSC 2509]
Length = 573
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/424 (43%), Positives = 262/424 (61%), Gaps = 33/424 (7%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
+ +P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QS
Sbjct: 147 EASDPEVMRTFYQRLFPWRYLFQWLN------HSPTPTNDFGHREFAFTLQNDAYLRYQS 200
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F + L + PS+ +IGPVY+ +P R + F P+ +EL FDID+TDYD
Sbjct: 201 FTTSDLLRKDVLRLMPSRFEIGPVYTANPRDRKTLRNS--SAFRPLSKELCFDIDLTDYD 258
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
D+R CC A++C +CW +T+AIKV+DTALR+DFGF HI+WVYSGRRG H WVCD AR
Sbjct: 259 DIRTCCDKANICQKCWQFITMAIKVVDTALREDFGFKHIMWVYSGRRGAHAWVCDKSARA 318
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFS 253
L +++R AIA Y V +G S KKV+ PLHP LVRS ++L++ F+ +L +Q+ +
Sbjct: 319 LDDQKRRAIAGYLEVIRGGAQSGKKVNLRRPLHPHLVRSL-DILKQHFQSDVLEAQDPWR 377
Query: 254 TEERYEKILSMIPDE--SVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQK-- 309
TE++ EK+L+++P + + S LR KW ++S + + +W + + ++ K
Sbjct: 378 TEDQQEKLLALLPSDQKQLVSALRNKW------ASSPDRPSTLKWADIDSVAKTSTAKNF 431
Query: 310 -VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK-DCEEFD 367
+ L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID K E FD
Sbjct: 432 DTKSLLDAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDVKRGLESFD 491
Query: 368 PTTVPTLSELLRELN--------TGDSRMDVDN---EWEKTSLGKSIRFFRSSFLQPLLK 416
P VPT+ L+RE++ G +V+ +WEKTSL I FFR SF+ L+K
Sbjct: 492 PLGVPTVQSLIREIDEWKKPETKEGGQEQEVEKHVVDWEKTSLKGYIEFFR-SFVIGLMK 550
Query: 417 SCKE 420
+E
Sbjct: 551 DERE 554
>gi|89267400|emb|CAJ82378.1| primase, polypeptide 1, 49kDa [Xenopus (Silurana) tropicalis]
Length = 420
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 266/421 (63%), Gaps = 34/421 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFP F+W++YG K+YF REFSFTL +D+Y+R+QSFN++
Sbjct: 12 PDLLPLYYRRLFPFYQYFRWLNYG------GVVKNYFHHREFSFTLKDDVYVRYQSFNNQ 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ CP KIDIG VYS P+ + G F E+EL+FDID+TDYDDVR
Sbjct: 66 SELEKEMQKMCPYKIDIGAVYSHKPSLHNTVKSG---TFQAQEKELVFDIDMTDYDDVRR 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A++++D AL +DFGF H LWVYSGRRGVHCWVCD AR+L+
Sbjct: 123 CCSSADICPKCWTLMTIAVRILDRALAEDFGFQHRLWVYSGRRGVHCWVCDDSARKLSQA 182
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
+R A+A+Y V KG E + KKV P+HPF+ +S V R +FE+ L+ Q++ ++
Sbjct: 183 ERSAVAEYLSVVKGGEETIKKVQLSDPIHPFIGKSLKMVER-YFEKYALVDQDILENKQC 241
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++K+++++P+ + +EN SK + RW++L + L++ + ++
Sbjct: 242 WDKVVALVPEVA---------RENLLREFSKARSSVERWDKLSSCLEATVKDLRRHSNIP 292
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
+EI+ F YPRLD+ VSK NHLLK+PF VHPKTGR+ +PID K ++FDP +VPT+S +
Sbjct: 293 KEIMLQFCYPRLDVNVSKGLNHLLKSPFSVHPKTGRISVPIDTKKLDQFDPFSVPTISLI 352
Query: 378 LREL-NTGDSRMDVDN-------------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEME 423
EL N D D+ ++++TSL I+ F FL L +S K E+
Sbjct: 353 CSELDNVCKKEDDQDSSGEGEPEAKKRTRDYKRTSLAPYIKVF-EQFLDKLDQSRKGELL 411
Query: 424 S 424
S
Sbjct: 412 S 412
>gi|325179651|emb|CCA14049.1| DNA primase small subunit putative [Albugo laibachii Nc14]
Length = 405
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 180/395 (45%), Positives = 242/395 (61%), Gaps = 30/395 (7%)
Query: 53 YFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGG 112
Y RREFSFTL+N Y+R+++F + N++ ++ P KIDIG V+S+ PA + +
Sbjct: 8 YLRRREFSFTLENGTYIRYKTFQNHQGFRNAMLKQMPCKIDIGAVFSISPADK---GKVN 64
Query: 113 DNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHI 172
F EREL+FDID+TDYDD R CC A C CW M A+KV+DTALR DFGF HI
Sbjct: 65 PTEFIAEERELVFDIDLTDYDDTRTCCREASTCSRCWSFMIAAVKVLDTALRQDFGFKHI 124
Query: 173 LWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRS 232
LWVYSGRRGVHCWV D KAR LTNE R +I Y + +GNENS +KV PLHP L R+
Sbjct: 125 LWVYSGRRGVHCWVADDKARVLTNEARTSIVHYLSLVEGNENSKRKVQLRYPLHPSLHRA 184
Query: 233 YTEVLREFFEEKLLL--SQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKED 290
TE+L F E +L Q++ + E+ + K+L+M+PDE + + L KW+ + + S E
Sbjct: 185 -TEILEPLFHEIILSENGQDILNDEKEFSKLLAMVPDEEIRNTLAEKWRRSLEEAESPES 243
Query: 291 INFFRWEQLKNTLQSG-------------------KQKVQGLRRCVEEIVFAFTYPRLDM 331
+W L+ + S K+ +Q L+ C++EIV A+ YPRLD+
Sbjct: 244 ----KWNDLQKAVHSALGNKSHKRTYAAYSEDSERKKNLQQLKGCLQEIVCAYLYPRLDV 299
Query: 332 EVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDS-RMDV 390
VSK RNHLLK+PF VHPKTGR+C+PIDP+ +F+P PTL+ L +ELN + D
Sbjct: 300 NVSKQRNHLLKSPFAVHPKTGRICVPIDPQAIIDFNPDNAPTLALLQQELNNKSAIGSDP 359
Query: 391 DNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESG 425
+ +TSL K I+FF FL+PLL + K G
Sbjct: 360 QSILHQTSLQKHIKFFEKKFLKPLLLAAKANEREG 394
>gi|336273220|ref|XP_003351365.1| hypothetical protein SMAC_03671 [Sordaria macrospora k-hell]
gi|380092886|emb|CCC09639.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 568
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 186/425 (43%), Positives = 261/425 (61%), Gaps = 36/425 (8%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
+ +P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QS
Sbjct: 144 EASDPEVMRTFYQRLFPWRYLFQWLN------HSPTPTNDFGHREFAFTLQNDAYLRYQS 197
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F + L + PS+ +IGPVY+ +P R + F P+ +EL FDID+TDYD
Sbjct: 198 FATSDLLRKDVLRLMPSRFEIGPVYTANPRDRKTLRNS--SAFRPLSKELCFDIDLTDYD 255
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
D+R CC A++C CW +T+AIKV+DTALR+DFGF HI+WVYSGRRG H WVCD KAR
Sbjct: 256 DIRTCCDKANICQRCWQFITMAIKVVDTALREDFGFKHIMWVYSGRRGAHAWVCDKKARA 315
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFS 253
L +++R AIA Y V +G S KKV+ PLHP LVRS +L++ F+ +L +Q+ +
Sbjct: 316 LDDQKRRAIAGYLEVIRGGAQSGKKVNLRRPLHPHLVRSLN-ILKQHFQADVLEAQDPWR 374
Query: 254 TEERYEKILSMIPDE--SVTSELRGKWQENRRSSNSKEDINFFRWEQL----KNTLQSGK 307
TEE+ EK+L+++P + + S LR KW ++S + + +W + K ++ +
Sbjct: 375 TEEQQEKLLALLPSDQKQLISALRNKW------ASSPDRPSILKWADIDTVAKTSMTAKN 428
Query: 308 QKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK-DCEEF 366
+ L ++IV TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID K + E F
Sbjct: 429 FDTKNLLDAKQDIVLEHTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDVKRNLEGF 488
Query: 367 DPTTVPTLSELLRELN-----------TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLL 415
DP VPT+ L+RE++ G+ + VD WEKTSL I FFR SF+ L+
Sbjct: 489 DPLGVPTVQSLIREIDEWKKPEPAHEGEGEEKHVVD--WEKTSLKGYIEFFR-SFVIGLM 545
Query: 416 KSCKE 420
K +E
Sbjct: 546 KDERE 550
>gi|119492141|ref|XP_001263541.1| DNA primase subunit Pri1, putative [Neosartorya fischeri NRRL 181]
gi|119411701|gb|EAW21644.1| DNA primase subunit Pri1, putative [Neosartorya fischeri NRRL 181]
Length = 520
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 183/423 (43%), Positives = 260/423 (61%), Gaps = 41/423 (9%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+QS+ +
Sbjct: 92 DIMLAFYQRLFPFRYLFQWL---NHGIIPSPD---FGNREFALTLQNDAYLRYQSYATAD 145
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
I PS+ +IGPVY+ +P R +GG P+ +EL+FDID+TDYDD+R C
Sbjct: 146 LFRKDILNMNPSRFEIGPVYNTNPRDRKTL-RGGQ--MKPISKELVFDIDLTDYDDIRSC 202
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C+ A++C +CW +T+A+KV+DTALR+DFGF+HILWVYSGRRG H WVCD +AR L +++
Sbjct: 203 CTKANICRKCWTFVTMAMKVVDTALREDFGFEHILWVYSGRRGAHAWVCDPRARSLPDDR 262
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R AIA Y V +G S K+V+ PLHP + RS E+L+ FF + L+ Q+ F++ E+
Sbjct: 263 RRAIAGYLDVVRGGSQSGKRVNMKRPLHPHMSRSL-EILKPFFAQTTLVDQDTFASSEQA 321
Query: 259 EKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
E++LS++PD+++ LR KW +R S+N DI + L T +S L+
Sbjct: 322 ERLLSLLPDKTLNDALRKKWDSSPDRSSTNKWADI-----DALAKTGKSSTLNPTTLKDA 376
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PID K +EFDP +VPT+++
Sbjct: 377 KQDIVLEYTYPRLDAEVSKKMIHLLKSPFVIHPGTGRVCVPIDAKKADEFDPLSVPTVTQ 436
Query: 377 LLRELNTGDSRMDVDN-----------------------EWEKTSLGKSIRFFRSSFLQP 413
LL E++ D+ N ++EKTSL I +FR SF+
Sbjct: 437 LLAEIDAWDAEHSSGNAGAEAGQGESNTPSDSQGSRKLQDYEKTSLKPYIDYFR-SFIAS 495
Query: 414 LLK 416
L K
Sbjct: 496 LNK 498
>gi|121705310|ref|XP_001270918.1| DNA primase subunit Pri1, putative [Aspergillus clavatus NRRL 1]
gi|119399064|gb|EAW09492.1| DNA primase subunit Pri1, putative [Aspergillus clavatus NRRL 1]
Length = 514
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 185/420 (44%), Positives = 257/420 (61%), Gaps = 38/420 (9%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+QS+ +
Sbjct: 89 DIMLAFYQRLFPFRYLFQWL---NHGIIPSPD---FGNREFALTLQNDAYLRYQSYATAD 142
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
I PS+ +IGPVY+ +P R +GG PV +EL+FDID+TDYDD+R C
Sbjct: 143 LFRKDILRMNPSRFEIGPVYNANPRDRKTL-RGGQ--MKPVSKELVFDIDLTDYDDIRSC 199
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C A++C +CW +T+AIKVIDTALR+DFGF+HILWVYSGRRG H WVCD +AR L +++
Sbjct: 200 CEKANICRKCWAFVTMAIKVIDTALREDFGFEHILWVYSGRRGAHAWVCDPRARSLPDDR 259
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R AIA Y V +G S K+V+ PLHP + RS ++L FF E L+ Q+ F + E+
Sbjct: 260 RRAIAGYLEVVRGGAQSGKRVNMKRPLHPHMSRSL-DILAPFFAETTLVDQDTFGSSEQA 318
Query: 259 EKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
E++L+++PD+ + + LR KW NR S++ DI + L +T +S L
Sbjct: 319 ERLLALLPDKELNTALRKKWNSSPNRSSTSKWADI-----DALASTGRSNTLNTSALLDA 373
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
+++V +TYPRLD EVSK HLLK+PF VHP TGRVC+P+D K E+FDP +VPT++E
Sbjct: 374 KQDVVLEYTYPRLDAEVSKKMIHLLKSPFVVHPGTGRVCVPLDAKKAEDFDPLSVPTVTE 433
Query: 377 LLRELNTGDSRMDVDN--------------------EWEKTSLGKSIRFFRSSFLQPLLK 416
LL E++ D+ N ++EKTSL I +FR SF+ L K
Sbjct: 434 LLAEIDAWDAEHSNGNATTEDAEGEGNGSQGNRKLQDYEKTSLKPYIDYFR-SFIAALNK 492
>gi|85093187|ref|XP_959645.1| DNA primase small subunit [Neurospora crassa OR74A]
gi|28921091|gb|EAA30409.1| DNA primase small subunit [Neurospora crassa OR74A]
Length = 576
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 183/424 (43%), Positives = 262/424 (61%), Gaps = 33/424 (7%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
+ +P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QS
Sbjct: 147 EASDPEVMRTFYQRLFPWRYLFQWLN------HSPTPTNDFGHREFAFTLQNDAYLRYQS 200
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F + L + PS+ +IGPVY+ +P R + F P+ +EL FDID+TDYD
Sbjct: 201 FTTSDLLRKDVLRLMPSRFEIGPVYTANPRDRKTLRNS--SAFRPLSKELCFDIDLTDYD 258
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
D+R CC A++C +CW +T+AIKV+DTALR+DFGF HI+WVYSGRRG H WVCD AR
Sbjct: 259 DIRTCCDKANICQKCWQFITMAIKVVDTALREDFGFKHIMWVYSGRRGAHAWVCDKSARA 318
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFS 253
L +++R AIA Y V +G S KKV+ PLHP LVRS ++L++ F+ +L +Q+ +
Sbjct: 319 LDDQKRRAIAGYLEVIRGGAQSGKKVNLRRPLHPHLVRSL-DILKQHFQSDVLEAQDPWR 377
Query: 254 TEERYEKILSMIPDE--SVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQK-- 309
TE++ EK+L+++P + + S LR KW ++S + + +W + + ++ K
Sbjct: 378 TEDQQEKLLALLPSDQKQLVSALRNKW------ASSPDRPSTLKWADIDSVAKTSTAKNF 431
Query: 310 -VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK-DCEEFD 367
+ L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID K E FD
Sbjct: 432 DTKSLLDAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDVKRGLESFD 491
Query: 368 PTTVPTLSELLRELN--------TGDSRMDVDN---EWEKTSLGKSIRFFRSSFLQPLLK 416
P VPT+ L+RE++ G +V+ +WEKTSL I FFR SF+ L+K
Sbjct: 492 PLGVPTVQSLIREIDEWKKPEPKEGRQEQEVEKHVVDWEKTSLKGYIEFFR-SFVIGLMK 550
Query: 417 SCKE 420
+E
Sbjct: 551 DERE 554
>gi|327264530|ref|XP_003217066.1| PREDICTED: DNA primase small subunit-like [Anolis carolinensis]
Length = 555
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 272/423 (64%), Gaps = 22/423 (5%)
Query: 15 GFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSF 74
G P+ L +YY RLFP +W+ YG+ K+YF RREFSFTL +DIY+R+QSF
Sbjct: 7 GSLPDLLPLYYRRLFPFGLYGRWLRYGD------VTKNYFQRREFSFTLRDDIYVRYQSF 60
Query: 75 NSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDD 134
N+ ELE I++ CP KIDIG VYS P + + + F E+EL+FDID+TDYDD
Sbjct: 61 NTPQELEKEIQKMCPYKIDIGAVYSHKPIQHNTVHM---SAFQAQEKELVFDIDMTDYDD 117
Query: 135 VRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRL 194
VR CCS AD+C +CW LMT+AI++ID +L +DFG H LWVYSGRRGVHCWVCD R+
Sbjct: 118 VRRCCSSADICSKCWTLMTIAIRIIDRSLVEDFGIKHRLWVYSGRRGVHCWVCDDSVRKW 177
Query: 195 TNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
++ R A +Y V KG + KKV +HPF +R +V++E+FEE L+ Q++ +
Sbjct: 178 SSTLRSAAVEYLTVVKGGGETIKKVVLLENIHPF-IRKSIDVIKEYFEEYALVGQDILGS 236
Query: 255 EERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQ----KV 310
+E YEK+L+++ ESV L+ +++ +++ +S + N + +Q+KN+++S Q +
Sbjct: 237 KESYEKVLALV-SESVRENLQTEFR--KKNHDSLQRWNILK-KQVKNSMRSLFQFSNLTL 292
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
Q +R EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID K +EFDP T
Sbjct: 293 QTKQRTEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLKKVDEFDPFT 352
Query: 371 VPTLSELLRELNTGDS-RMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCK---EEMESGY 426
VPT+S+L EL+T S +D +T + IR +R + L P +K + EE+ES
Sbjct: 353 VPTISQLCHELDTIKSDEVDGKENGGETEGSRRIRDYRKTSLAPYVKVFEQFVEELESSQ 412
Query: 427 KAK 429
+ +
Sbjct: 413 RGE 415
>gi|295668429|ref|XP_002794763.1| DNA primase small subunit [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285456|gb|EEH41022.1| DNA primase small subunit [Paracoccidioides sp. 'lutzii' Pb01]
Length = 564
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 196/478 (41%), Positives = 270/478 (56%), Gaps = 72/478 (15%)
Query: 6 PKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDN 65
P+ P G +P + +Y RLFP +F+W+ N P+ D FG REF+FTL N
Sbjct: 93 PESAGPGPTGVDPGTMYAFYLRLFPFRYLFQWL---NHAVKPSPD---FGNREFAFTLQN 146
Query: 66 DIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIF 125
D YLR+QSF S L I PS+ +IGPVYS +P R + + + F P+ +EL+F
Sbjct: 147 DAYLRYQSFPSAELLRKEILHLNPSRFEIGPVYSTNPRDRKSLRKA--SSFKPIAKELVF 204
Query: 126 DIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCW 185
DID+TDYDDVR CC+ A++C +CW +T+AIKVIDTALR+DFGF+H+LWVYSGRRG H W
Sbjct: 205 DIDLTDYDDVRTCCTKANICSKCWSFVTMAIKVIDTALREDFGFEHVLWVYSGRRGAHAW 264
Query: 186 VCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKL 245
VCD KAR L++++R AIA Y V +G S K+V+ PLHP + RS E+L+ +F +
Sbjct: 265 VCDAKARSLSDDRRKAIAGYLEVVRGGSQSGKRVNIKRPLHPHVARSL-EILKPYFASTI 323
Query: 246 LLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQ 304
L Q+ FS+ + E++LS++PD+ + LR KW RSS SK W + +
Sbjct: 324 LGGQDTFSSAAQAEQLLSLLPDKPLVDALRKKWDSAPGRSSTSK-------WNDIDALAK 376
Query: 305 SGKQK----------------VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVH 348
S + + + L ++I +TYPRLD EVSK HLLK+PF VH
Sbjct: 377 SVRSRGPDGKGKGGGGGKALDTKALLEAKQDIALEYTYPRLDAEVSKKLIHLLKSPFVVH 436
Query: 349 PKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGD----------------------- 385
P TGRVC+PID + E+FDP VPT+S L+ E+N D
Sbjct: 437 PGTGRVCVPIDVRRVEDFDPLDVPTVSRLIAEINEWDKDEGKRKGEGAVVKDEEVNGDGI 496
Query: 386 ---------SRMDVD------NEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
S DVD ++EKTSL I +FR SF+ L+K+ + +E +A
Sbjct: 497 DGVGGGVPSSVADVDGKGRRLQDYEKTSLKPYIDYFR-SFVTGLIKAERAGVEKRERA 553
>gi|154313300|ref|XP_001555976.1| hypothetical protein BC1G_05347 [Botryotinia fuckeliana B05.10]
Length = 510
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/431 (42%), Positives = 265/431 (61%), Gaps = 30/431 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W+ N P+ D FG REF+FTL ND YLR+Q+F +
Sbjct: 102 DPEVMRSFYQRLFPWRHLFQWL---NHSPTPSTD---FGHREFAFTLQNDAYLRYQAFPT 155
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + + F P+ +EL FDID+TDYD++R
Sbjct: 156 SDLLRKDVLRLMPSRFEIGPVYSTNPRDRKTLRKS--SAFRPIAKELCFDIDLTDYDEIR 213
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW +T+AIKV+D ALRDD GF HI+WVYSGRRG H WVCD KAR++ +
Sbjct: 214 TCCDKANICNKCWQFITMAIKVVDVALRDDSGFKHIMWVYSGRRGAHAWVCDKKARQMDD 273
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G KKV+ PLHP ++RS ++L+ F+ +L Q+ + ++
Sbjct: 274 QKRRAIAGYLEVIRGGSQPAKKVNVKRPLHPHVLRSL-DILKGHFQNDILHDQDPWEEDD 332
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQ-KVQGLR 314
+ +K+L ++PD ++ LR KW RSS SK W + +S K + L
Sbjct: 333 KIDKLLQLLPDRTLNESLRKKWSSAPGRSSTSK-------WADIDALAKSTKGLDPRALL 385
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
++IV +TYPRLD+EVSKH NHLLK+PF VHP TGRVC+PID + +FDP VPT+
Sbjct: 386 EAKQDIVLEYTYPRLDIEVSKHLNHLLKSPFVVHPGTGRVCVPIDTRHVGDFDPLAVPTV 445
Query: 375 SELLRELN------TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
+ELL E++ GD +WEKTSL + +FR SF+ L+K ES K
Sbjct: 446 TELLGEIDQWTPPEAGDLDGKSIQDWEKTSLKPYVDYFR-SFVAALMKD-----ESDIKI 499
Query: 429 KIQQTKNSLSW 439
K ++ +++++
Sbjct: 500 KRERDTDAMAF 510
>gi|358368261|dbj|GAA84878.1| DNA primase subunit Pri1 [Aspergillus kawachii IFO 4308]
Length = 514
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 262/424 (61%), Gaps = 42/424 (9%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+QS+ +
Sbjct: 84 DTMLAFYQRLFPFRYLFQWL---NHGIVPSPD---FGNREFALTLQNDAYLRYQSYATAD 137
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
I + PS+ +IGPVY+ +P + +GG P+ +EL+FDID+TDYDD+R C
Sbjct: 138 LFRKDILKMNPSRFEIGPVYNTNPRDKKTL-RGGQ--MKPIAKELVFDIDLTDYDDIRSC 194
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C A++C +CW +T+A+KV+DTALR+DFGF+HILWVYSGRRG H WVCD +AR L +++
Sbjct: 195 CEKANICSKCWAFVTMAMKVVDTALREDFGFEHILWVYSGRRGAHAWVCDPRARSLPDDR 254
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R AIA Y V +G +S K+V+ PLHP + RS E+L+ +F + L+ Q FS+ E+
Sbjct: 255 RRAIAGYLDVIRGGNSSGKRVNLKRPLHPHMSRSL-EILKPYFAQTTLVDQETFSSSEQT 313
Query: 259 EKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
++ILS++PD+ + LR +W+ +R S+N DI+ L T +S LR
Sbjct: 314 QRILSLLPDKGLNESLRKRWESSPDRSSANKWADID-----ALAKTGKSSTLNPTTLRDA 368
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PID + E+FDP +VPT++E
Sbjct: 369 KQDIVLEYTYPRLDSEVSKKMIHLLKSPFVIHPGTGRVCVPIDARKAEQFDPLSVPTVTE 428
Query: 377 LLRELNTGDSRMDVDN------------------------EWEKTSLGKSIRFFRSSFLQ 412
LL E++ D+ +N ++EKTSL + +FR SF+
Sbjct: 429 LLAEIDAWDAEHPSNNAGAEVAEGEGSVPESDARGSRRLQDYEKTSLKPYVDYFR-SFIA 487
Query: 413 PLLK 416
LLK
Sbjct: 488 GLLK 491
>gi|238484545|ref|XP_002373511.1| DNA primase subunit Pri1, putative [Aspergillus flavus NRRL3357]
gi|220701561|gb|EED57899.1| DNA primase subunit Pri1, putative [Aspergillus flavus NRRL3357]
Length = 524
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/430 (43%), Positives = 263/430 (61%), Gaps = 42/430 (9%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
P + + + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+Q
Sbjct: 88 PAHVDTDTMLAFYQRLFPFRYLFQWL---NHGIVPSPD---FGNREFALTLQNDAYLRYQ 141
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY 132
S+ + I PS+ +IGPVY+ +P R +GG PV +EL+FDID+TDY
Sbjct: 142 SYATADLFRKDILRMNPSRFEIGPVYNTNPRDRKTL-RGGQ--MKPVSKELVFDIDLTDY 198
Query: 133 DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKAR 192
DD+R CC A++C +CW +T+A+KV+DTALRDDFGF HILWVYSGRRG H WVCD +AR
Sbjct: 199 DDIRSCCEKANICGKCWTFVTMAMKVVDTALRDDFGFQHILWVYSGRRGAHAWVCDPRAR 258
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
L +++R AIA Y + +G S K+V+ PLHP + RS E+L+ +F + L+ Q+ F
Sbjct: 259 SLPDDRRRAIAGYLDLLRGGAQSGKRVNLKRPLHPHMSRSL-EILKPYFAQTTLVDQDTF 317
Query: 253 STEERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
+ E+ +++L+++PD+++ LR KW+ +R S+N DI + L T +S K
Sbjct: 318 VSSEQAQRLLALLPDKALNDALRKKWESSPDRSSTNKWADI-----DSLAKTGKSSTLKT 372
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
LR ++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PID + E+FDP +
Sbjct: 373 STLREAKQDIVLEYTYPRLDSEVSKKMIHLLKSPFVIHPGTGRVCVPIDARKAEQFDPLS 432
Query: 371 VPTLSELLRELNTGDSRMD-------VDNE-----------------WEKTSLGKSIRFF 406
VPT+++LL E++ D+ VD E +EKTSL + +F
Sbjct: 433 VPTVTQLLGEIDAYDAENPSNGAGDAVDGEGSVPNDSDVRGSRKLQDYEKTSLKPYVDYF 492
Query: 407 RSSFLQPLLK 416
R SF+ LLK
Sbjct: 493 R-SFIAGLLK 501
>gi|41393065|ref|NP_958856.1| DNA primase small subunit [Danio rerio]
gi|28839820|gb|AAH47856.1| Primase polypeptide 1 [Danio rerio]
Length = 425
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/424 (43%), Positives = 266/424 (62%), Gaps = 39/424 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFP + F+W+SYG K+YF REFSFTL +DIY+R+QSF+S+
Sbjct: 12 PDLLPLYYRRLFPFSQYFRWLSYG------GVSKNYFQNREFSFTLKDDIYVRYQSFSSQ 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ELE +++ P KIDIG VYS P++ + G F +E+EL+FDID+TDYDDVR
Sbjct: 66 NELEKEMQKMVPYKIDIGAVYSHRPSQHNTVKSG---TFQALEKELVFDIDMTDYDDVRR 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI+++D ALR+DFGF H+LWVYSGRRGVHCWVCD AR+L+
Sbjct: 123 CCSAADICSKCWTLMTIAIRILDRALREDFGFHHLLWVYSGRRGVHCWVCDDAARKLSVA 182
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R A+A+Y + KG E + +KV P+HPF+ RS + V+ +F + ++ Q++ +E
Sbjct: 183 ARSAVAEYLSLVKGGEETLRKVVLSDPIHPFISRSLS-VVEHYFPQYAIVDQDILGNKES 241
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV-QGLRRC 316
+K+L+++P E + +L +Q N KE + RW++L+ + K +G +
Sbjct: 242 VDKVLALLP-EDIKKDLIEYYQ------NHKEPMK--RWDRLRQLVDHKKSSSKKGGQYY 292
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
+EI+ + YPRLD+ VSK NHLLK+PF VHPKTGR+ +PID K+ + FDP VPT+S
Sbjct: 293 DKEIMLQYCYPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDLKELDTFDPFEVPTISL 352
Query: 377 LLRELNT--GDSRMDVD----------------NEWEKTSLGKSIRFFRSSFLQPLLKSC 418
+ EL D D D ++++TSL K ++ FL + +S
Sbjct: 353 ICEELEKPRADEAEDEDVKDKENEQEAAERRRIRDYKRTSLAKYVKVL-DRFLDSMARSR 411
Query: 419 KEEM 422
K EM
Sbjct: 412 KGEM 415
>gi|169767636|ref|XP_001818289.1| DNA primase small subunit [Aspergillus oryzae RIB40]
gi|83766144|dbj|BAE56287.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391873278|gb|EIT82331.1| eukaryotic-type DNA primase, catalytic (small) subunit [Aspergillus
oryzae 3.042]
Length = 524
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/430 (43%), Positives = 263/430 (61%), Gaps = 42/430 (9%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
P + + + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+Q
Sbjct: 88 PAHVDTDTMLAFYQRLFPFRYLFQWL---NHGIVPSPD---FGNREFALTLQNDAYLRYQ 141
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY 132
S+ + I PS+ +IGPVY+ +P R +GG PV +EL+FDID+TDY
Sbjct: 142 SYATADLFRKDILRMNPSRFEIGPVYNTNPRDRKTL-RGGQ--MKPVSKELVFDIDLTDY 198
Query: 133 DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKAR 192
DD+R CC A++C +CW +T+A+KV+DTALRDDFGF HILWVYSGRRG H WVCD +AR
Sbjct: 199 DDIRSCCEKANICGKCWTFVTMAMKVVDTALRDDFGFQHILWVYSGRRGAHAWVCDPRAR 258
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
L +++R AIA Y + +G S K+V+ PLHP + RS E+L+ +F + L+ Q+ F
Sbjct: 259 SLPDDRRRAIAGYLDLLRGGAQSGKRVNLKRPLHPHMSRSL-EILKPYFAQTTLVDQDTF 317
Query: 253 STEERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
+ E+ +++L+++PD+++ LR KW+ +R S+N DI + L T +S K
Sbjct: 318 VSSEQAQRLLALLPDKALNDALRKKWESSPDRSSTNKWADI-----DSLAKTGKSSTLKT 372
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
LR ++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PID + E+FDP +
Sbjct: 373 STLREAKQDIVLEYTYPRLDSEVSKKMIHLLKSPFVIHPGTGRVCVPIDARKAEQFDPLS 432
Query: 371 VPTLSELLRELNTGDSRMD-------VDNE-----------------WEKTSLGKSIRFF 406
VPT+++LL E++ D+ VD E +EKTSL + +F
Sbjct: 433 VPTVTQLLGEIDAYDAENPSNGAGDAVDGEGSVPNDSDVRGSRKLQDYEKTSLKPYVDYF 492
Query: 407 RSSFLQPLLK 416
R SF+ LLK
Sbjct: 493 R-SFIAGLLK 501
>gi|47498036|ref|NP_998870.1| primase, DNA, polypeptide 1 (49kDa) [Xenopus (Silurana) tropicalis]
gi|45708855|gb|AAH67914.1| primase, polypeptide 1, 49kDa [Xenopus (Silurana) tropicalis]
Length = 420
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 268/421 (63%), Gaps = 34/421 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFP F+W++YG K+YF REFSFTL +D Y+R+QSFN++
Sbjct: 12 PDLLPLYYRRLFPFYQYFRWLNYG------GVVKNYFHHREFSFTLKDDAYVRYQSFNNQ 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ CP KIDIG VYS P+ + G F E+EL+FDID+TDYDDVR
Sbjct: 66 SELEKEMQKMCPYKIDIGAVYSHKPSLHNTVKSG---TFQAQEKELVFDIDMTDYDDVRR 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A++++D AL +DFGF H LWVYSGRRGVHCWVCD AR+L+
Sbjct: 123 CCSSADICPKCWTLMTIAVRILDRALAEDFGFQHRLWVYSGRRGVHCWVCDDSARKLSQA 182
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
+R A+A+Y V KG E + KKV P+HPF+ +S V R +FE+ L+ Q++ ++
Sbjct: 183 ERSAVAEYLSVVKGGEETIKKVQLSDPIHPFIGKSLKMVER-YFEKYALVDQDILENKQC 241
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++K+++++P+ + + LR E ++ +S E RW++L + L++ + ++
Sbjct: 242 WDKVVALVPEVARENLLR----EFSKARSSVE-----RWDKLSSCLEATVKDLRRHSNIP 292
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
+EI+ F YPRLD+ VSK NHLLK+PF VHPKTGR+ +PID K ++FDP +VPT+S +
Sbjct: 293 KEIMLQFCYPRLDVNVSKGLNHLLKSPFSVHPKTGRISVPIDTKKLDQFDPFSVPTISLI 352
Query: 378 LREL-NTGDSRMDVDN-------------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEME 423
EL N D D+ ++++TSL I+ F FL L +S K E+
Sbjct: 353 CSELDNVCKKEDDQDSSGEGEPEAKKRTRDYKRTSLAPYIKVF-EQFLDKLDQSRKGELL 411
Query: 424 S 424
S
Sbjct: 412 S 412
>gi|442757837|gb|JAA71077.1| Putative eukaryotic-type dna primase catalytic small subunit
[Ixodes ricinus]
Length = 420
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/419 (43%), Positives = 264/419 (63%), Gaps = 35/419 (8%)
Query: 1 MLIDGP-KQGNVIPDGFNP----NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFG 55
M + P +QG+ D ++P +YL +YY +LFP + +KW++YG DK+
Sbjct: 1 MALSKPSEQGH---DRYDPKHFSDYLPLYYSKLFPSSTFYKWLTYG------GVDKTMGQ 51
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
RE SFTL++D+YLRFQSF+ + +LE ++++K P KIDIG +Y+ +P H ++
Sbjct: 52 NREISFTLEDDVYLRFQSFSEQKDLEKALRDKNPHKIDIGAIYNHNPKLHH-----HEST 106
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWV 175
FAP E+EL+FDID+TDYD+VR CC GAD+C CW MT+A++++D LR+DFGF+HILWV
Sbjct: 107 FAPREKELVFDIDMTDYDEVRTCCQGADICNNCWLFMTLAMQILDRTLREDFGFEHILWV 166
Query: 176 YSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTE 235
YSGRRGVHCWVCD KAR+L + R AIA+Y V KG +S+KKVS +HP +++ +
Sbjct: 167 YSGRRGVHCWVCDAKARKLHSSARSAIANYVSVIKGGAHSSKKVSIFKTIHP-SIKASLK 225
Query: 236 VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
+L++ F L +Q + ++ + +++ PDES E+R S S E R
Sbjct: 226 ILKKSFSTLTLENQRILEDDKFWHGVINNCPDESSKEEMRN----CVLSPTSSEQ----R 277
Query: 296 WEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
W + + ++ K+K + VEE++ YPRLD+ V+K HLLKAPFCVHPKTGRVC
Sbjct: 278 WAEFVDAVERLKRKNLKCQFLVEEVMLELCYPRLDIAVTKGVQHLLKAPFCVHPKTGRVC 337
Query: 356 IPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMD-------VDNEWEKTSLGKSIRFFR 407
+PID + FDPT VPT+ +L E++ D+ V +++KTSL SI F+
Sbjct: 338 VPIDVTNVHAFDPTKVPTVCDLFNEIDAYDANQKESENTSPVMKDYKKTSLAPSISLFQ 396
>gi|396473736|ref|XP_003839405.1| similar to DNA primase small subunit [Leptosphaeria maculans JN3]
gi|312215974|emb|CBX95926.1| similar to DNA primase small subunit [Leptosphaeria maculans JN3]
Length = 494
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/415 (42%), Positives = 264/415 (63%), Gaps = 25/415 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P+ ++ +Y R+FP +F+W+++G H F REF+FTL N+ YLR+QSF +
Sbjct: 88 DPDIMRAFYQRIFPFRQLFQWLNHGPIPSHD------FDHREFAFTLPNESYLRYQSFGT 141
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L P++ +IGP+YS +P R + + F P+ +EL+FDID+TDYDD+R
Sbjct: 142 ADLLRKQCIAMLPTRFEIGPMYSTNPRDRKTLRKA--SAFRPLMKELVFDIDMTDYDDIR 199
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC+GA++C +CW +T+AIK +D ALR+DFGF HILWVYSGRRG H WVCD +AR L +
Sbjct: 200 TCCNGANICHKCWSFITMAIKTLDIALREDFGFKHILWVYSGRRGAHAWVCDKRARELDD 259
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA YF + KG + KKV+ PLHP + RS ++L+E+F+ +L Q+ ++TEE
Sbjct: 260 QKRRAIAGYFELLKGGDQGGKKVNARRPLHPHIERS-RQILKEYFQTTILAEQDPWATEE 318
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSG--KQKVQGLR 314
+ + +L+++PD ++ + L+ KW + S++ +W + + +SG + + L
Sbjct: 319 KAQHLLNLLPDTTLRAALQKKWSSSPNRSSAS------KWADIDSLAESGNLSKTPKELL 372
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
++IV +TYPRLD EVSK NHLLK+PF VHP TGRVC+PID + EEFDP VPT+
Sbjct: 373 EAKQDIVLEYTYPRLDAEVSKKLNHLLKSPFVVHPGTGRVCVPIDTRKVEEFDPLEVPTV 432
Query: 375 SELLRELN--TGDSRMDVDNEWEKTSLGKSIRFFRSSFL------QPLLKSCKEE 421
++LL+E++ G+ +WEKTSL + FR +P+LK +EE
Sbjct: 433 TQLLQEIDDWEGEEGEKKLQDWEKTSLKPYVDHFRRFIAGLVEDEKPVLKREREE 487
>gi|6679459|ref|NP_032947.1| DNA primase small subunit [Mus musculus]
gi|130897|sp|P20664.1|PRI1_MOUSE RecName: Full=DNA primase small subunit; AltName: Full=DNA primase
49 kDa subunit; Short=p49
gi|303661|dbj|BAA02744.1| primase small subunit [Mus musculus]
gi|26353584|dbj|BAC40422.1| unnamed protein product [Mus musculus]
gi|26354202|dbj|BAC40729.1| unnamed protein product [Mus musculus]
gi|58477611|gb|AAH89544.1| DNA primase, p49 subunit [Mus musculus]
Length = 417
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 263/421 (62%), Gaps = 39/421 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SELEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A+++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLNEKVHPF-VRKSINIIKKYFEEYALVGQDILENKEN 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ EL+ +Q+ S RWE L+ S + +C
Sbjct: 240 WDKILALVP-ETIHDELQRGFQKFHSSPQ--------RWEHLRKVANSSQNMKND--KCG 288
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
E++ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID ++FDP TVPT
Sbjct: 289 PWLEWEVMLQYCFPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDFHKVDQFDPFTVPT 348
Query: 374 LSELLREL------------NTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
+S + REL N DS+ V ++KTSL ++ F FL+ L KS K E
Sbjct: 349 ISAICRELDMVSTHEKEKEENEADSKHRVRG-YKKTSLAPYVKVF-EQFLENLDKSRKGE 406
Query: 422 M 422
+
Sbjct: 407 L 407
>gi|308810751|ref|XP_003082684.1| DNA primase small subunit family (ISS) [Ostreococcus tauri]
gi|116061153|emb|CAL56541.1| DNA primase small subunit family (ISS) [Ostreococcus tauri]
Length = 452
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/416 (41%), Positives = 249/416 (59%), Gaps = 40/416 (9%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD-----NDIYLRFQSFNSES 78
YY +P +FKW+S+GND RH DK+Y G+REF F LD +I+ R+Q F
Sbjct: 55 YYRNFYPAEALFKWLSHGNDERHAKADKTYAGKREFCFVLDKENGDGEIFCRYQCFEDAG 114
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
++ K P++I+ GPV + PA RH+ VEREL+FDID+TDYDDVR C
Sbjct: 115 RFAREVRSKNPARIEFGPVMNAKPAHRHSVK------LHSVERELVFDIDMTDYDDVRTC 168
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C A +C +CWPLMT+AIK++D LR DFGF H+LWVYSGRRGVHCWV D +AR+L++E
Sbjct: 169 CKDAQICGKCWPLMTIAIKILDAGLRRDFGFKHLLWVYSGRRGVHCWVSDERARKLSDEA 228
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R A+A+YF V KG S + S P+HP + R+Y +VL++++ E L Q + +
Sbjct: 229 RAAVAEYFAVVKGQGKSRRVYSI-NPMHPSVKRAYDDVLKKYWIETYLPEQRILENNAKL 287
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR--- 315
+++L ++ D+ + EL ++ ++ SS RW ++ + +Q QG++R
Sbjct: 288 DQVLDLLEDQELKDELVDEFNGSKMSSVE-------RWRVIEERVMQARQPKQGVKRNYT 340
Query: 316 ---CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
+E+I+F YPR+D+EVSKH NHLLK PFCVHPKTGRVC+P+DP E FDP VP
Sbjct: 341 LDFALEKIIFWHIYPRVDIEVSKHMNHLLKGPFCVHPKTGRVCVPMDPAKAEFFDPAAVP 400
Query: 373 TLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
T+ +D+DN +L +++R F +F KE + S +A
Sbjct: 401 TV-------------IDLDN--GNKTLDEAMRTFNETFWNAAEAENKERLTSLTRA 441
>gi|358394349|gb|EHK43742.1| hypothetical protein TRIATDRAFT_150169 [Trichoderma atroviride IMI
206040]
Length = 411
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/410 (44%), Positives = 254/410 (61%), Gaps = 31/410 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF + L
Sbjct: 1 MRSFYQRLFPWRQLFQWLN------HSPTPTNDFGNREFAFTLQNDAYLRYQSFATADLL 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ PS+ +IGPVYS +P R + F P+ +EL FDID+TDYDD+R CC
Sbjct: 55 RKDVLRLMPSRFEIGPVYSTNPRDRKTLRNS--SAFKPLAKELCFDIDLTDYDDIRTCCD 112
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A +C +CW MT+AIKV+D ALR+DFGF HI+WVYSGRRG H WVCD KAR + +++R
Sbjct: 113 KATICNKCWQFMTMAIKVVDVALREDFGFKHIMWVYSGRRGAHAWVCDKKARSMDDQKRR 172
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
AIA+Y V +G S KKV+ PLHP L RS ++L+ F+E +L Q+ + T E+ EK
Sbjct: 173 AIANYLEVIRGGSQSGKKVNVKRPLHPHLSRSL-DILKTHFQEDVLDVQDPWGTSEQAEK 231
Query: 261 ILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQK---VQGLRRC 316
+L ++PD ++ LR KW+ RSS SK W + ++G K + L
Sbjct: 232 LLQLLPDRNLNDSLRRKWESAPGRSSTSK-------WADIDAVAKTGASKNLDSRALLEA 284
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
++IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID + E+FDP VPT+
Sbjct: 285 KQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDTRALEDFDPLGVPTVQS 344
Query: 377 LLRELNT---------GDSRMDVD-NEWEKTSLGKSIRFFRSSFLQPLLK 416
LL E++T GD + V+ +WEKTSL + FR +F+ ++K
Sbjct: 345 LLAEIDTWKGGEEGEEGDDKSKVNIADWEKTSLKPYVDQFR-TFVSGIIK 393
>gi|70999998|ref|XP_754716.1| DNA primase subunit Pri1 [Aspergillus fumigatus Af293]
gi|66852353|gb|EAL92678.1| DNA primase subunit Pri1, putative [Aspergillus fumigatus Af293]
gi|159127725|gb|EDP52840.1| DNA primase subunit Pri1, putative [Aspergillus fumigatus A1163]
Length = 522
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/423 (43%), Positives = 260/423 (61%), Gaps = 41/423 (9%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+QS+ +
Sbjct: 94 DIMLAFYQRLFPFRYLFQWL---NHGIIPSPD---FGNREFALTLQNDAYLRYQSYATAD 147
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
I + PS+ +IGPVY+ +P R +GG P+ +EL+FDID+TDYDD+R C
Sbjct: 148 LFRKDILKMNPSRFEIGPVYNTNPRDRKTL-RGGQ--MKPISKELVFDIDLTDYDDIRSC 204
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C+ A++C +CW +T+A+KV+DTALR+DFGF+HILWVYSGRRG H WVCD +AR L +++
Sbjct: 205 CTKANICRKCWTFVTMAMKVVDTALREDFGFEHILWVYSGRRGAHAWVCDARARCLPDDR 264
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R AIA Y V +G S K+V+ PLHP + RS E+L+ FF + L+ Q+ F++ E+
Sbjct: 265 RRAIAGYLDVVRGGSQSGKRVNIKRPLHPHMSRSL-EILKPFFAQTTLIDQDTFASSEQA 323
Query: 259 EKILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
E++LS++PD+++ LR KW + R S+N DI+ L T +S LR
Sbjct: 324 ERLLSLLPDKTLNDALRKKWDSSPGRSSTNKWADID-----ALAKTGKSSTLNPTTLRDA 378
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PID K + FDP +VPT+++
Sbjct: 379 KQDIVLEYTYPRLDAEVSKKMIHLLKSPFVIHPGTGRVCVPIDAKKADGFDPLSVPTVTQ 438
Query: 377 LLRELNTGDSRMDVDN-----------------------EWEKTSLGKSIRFFRSSFLQP 413
LL E++ D+ N ++EKTSL I +FR SF+
Sbjct: 439 LLAEIDAWDAEHSSGNAGAEAGQDESHTPSDSQGSRKLQDYEKTSLKPYIDYFR-SFIAS 497
Query: 414 LLK 416
L K
Sbjct: 498 LNK 500
>gi|320588292|gb|EFX00761.1| DNA primase subunit [Grosmannia clavigera kw1407]
Length = 523
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 252/421 (59%), Gaps = 38/421 (9%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 103 DPEVMRSFYQRLFPWRYLFQWLN------HSPTPTNDFGHREFAFTLSNDAYLRYQSFPT 156
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P R + + + F P+ +EL FDID+TDYDDVR
Sbjct: 157 SELLRKDVLRLMPSRFEIGPVYTTNPRDRKSLSNT--SAFRPLAKELCFDIDLTDYDDVR 214
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C CW +T+AIKV+D ALRDDFGF H+LWVYSGRRG H WVCD +AR L +
Sbjct: 215 TCCDKANICGRCWQFITMAIKVVDVALRDDFGFQHVLWVYSGRRGAHAWVCDRRARTLDD 274
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G KKVS PLHP L RS +L F++ +L SQ+ + T E
Sbjct: 275 QKRRAIAGYLEVVRGGAQGGKKVSVRRPLHPHLARSL-RLLAPHFQDDVLQSQDPWDTSE 333
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
R EK+L ++PD ++ + LR KW RSS +K W + ++G K +
Sbjct: 334 RAEKLLQLLPDRTLNAALRRKWDAAPGRSSAAK-------WADIDVVAKTGASKALDAKA 386
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L +++V +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PID + ++FDP VP
Sbjct: 387 LLEAKQDVVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDLRRLDQFDPLAVP 446
Query: 373 TLSELLRELNTGDSRMDVD-----------------NEWEKTSLGKSIRFFRSSFLQPLL 415
T+ ELL+E++ +WEKTSL I FR +F+Q L+
Sbjct: 447 TVQELLQEIDAWQPPAGAANTAAAEASDGAAAPKPLQDWEKTSLRPYIELFR-TFVQALM 505
Query: 416 K 416
+
Sbjct: 506 R 506
>gi|297692200|ref|XP_002823455.1| PREDICTED: DNA primase small subunit [Pongo abelii]
Length = 420
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 269/421 (63%), Gaps = 36/421 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF +R +++++FEE L++Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-IRKSINIIKKYFEEYALVNQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR-- 315
++KIL+++P E++ EL+ +Q +S NS + RWE LK + ++ +
Sbjct: 240 WDKILALVP-ETIHDELQQSFQ---KSHNSLQ-----RWEHLKKVASKCQNNIKNDKYGP 290
Query: 316 -CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+
Sbjct: 291 WLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTI 350
Query: 375 SELLRELNTGDSRM----------DVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
S + REL+ + DV + +++KTSL ++ F FL+ L KS K E
Sbjct: 351 SFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVF-EHFLENLDKSQKGE 409
Query: 422 M 422
+
Sbjct: 410 L 410
>gi|426373076|ref|XP_004053438.1| PREDICTED: DNA primase small subunit [Gorilla gorilla gorilla]
Length = 420
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 270/421 (64%), Gaps = 36/421 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF +R +++++FEE L++Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDIKKKVHLSEKIHPF-IRKSINIIKKYFEEYALVNQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR-- 315
++KIL+++P E++ EL+ ++Q +S NS + RWE LK + ++ +
Sbjct: 240 WDKILALVP-ETIHDELQQRFQ---KSHNSLQ-----RWEHLKKVASRYQNNIKNDKYGP 290
Query: 316 -CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+
Sbjct: 291 WLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTI 350
Query: 375 SELLRELNTGDSRM----------DVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
S + REL+ + DV + +++KTSL ++ F FL+ L KS K E
Sbjct: 351 SFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVF-EHFLENLDKSRKGE 409
Query: 422 M 422
+
Sbjct: 410 L 410
>gi|350633525|gb|EHA21890.1| hypothetical protein ASPNIDRAFT_49072 [Aspergillus niger ATCC 1015]
Length = 514
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 260/424 (61%), Gaps = 42/424 (9%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+QS+ +
Sbjct: 84 DTMLAFYQRLFPFRYLFQWL---NHGIVPSPD---FGNREFALTLQNDAYLRYQSYATAD 137
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
I + PS+ +IGPVY+ +P R +GG P+ +EL+FDID+TDYDD+R C
Sbjct: 138 LFRKDILKMNPSRFEIGPVYNTNPRDRKTL-RGGQ--MKPIAKELVFDIDLTDYDDIRSC 194
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C A++C +CW +T+A+KV+DTALR+DFGF+HILWVYSGRRG H WVCD +AR L +++
Sbjct: 195 CEKANICSKCWAFVTMAMKVVDTALREDFGFEHILWVYSGRRGAHAWVCDPRARNLPDDR 254
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R AIA Y V +G +S K+V+ PLHP + RS E+L+ +F + L+ Q F + E+
Sbjct: 255 RRAIAGYLDVIRGGNSSGKRVNLKRPLHPHMSRSL-EILKPYFAQTTLVDQETFGSSEQA 313
Query: 259 EKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
+++LS++PD+ + LR +W+ +R S+N DI + L T +S LR
Sbjct: 314 QRLLSLLPDKGLNESLRKRWESSPDRSSANKWADI-----DALAKTGKSSTLNPTTLRDA 368
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PID + E+FDP +VPT+SE
Sbjct: 369 KQDIVLEYTYPRLDSEVSKKMIHLLKSPFVIHPGTGRVCVPIDARKAEQFDPLSVPTVSE 428
Query: 377 LLRELNTGDSRMDVDN------------------------EWEKTSLGKSIRFFRSSFLQ 412
LL E++ D+ N ++EKTSL + +FR SF+
Sbjct: 429 LLAEIDAWDAEHPSTNAGPEVADGEGSVPDSDARGSRRLQDYEKTSLKPYVDYFR-SFIA 487
Query: 413 PLLK 416
LLK
Sbjct: 488 GLLK 491
>gi|62898343|dbj|BAD97111.1| DNA primase small subunit, 49kDa variant [Homo sapiens]
Length = 420
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 269/421 (63%), Gaps = 36/421 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF +R +++++FEE L++Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-IRKSINIIKKYFEEYALVNQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR-- 315
++KIL+++P E++ EL+ +Q +S NS + RWE LK + ++ +
Sbjct: 240 WDKILALVP-ETIHDELQQSFQ---KSHNSLQ-----RWEHLKKVASRYQNNIKNDKYGP 290
Query: 316 -CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+
Sbjct: 291 WLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTI 350
Query: 375 SELLRELNTGDSRM----------DVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
S + REL+ + DV + +++KTSL ++ F FL+ L KS K E
Sbjct: 351 SFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVF-EHFLENLDKSRKGE 409
Query: 422 M 422
+
Sbjct: 410 L 410
>gi|74228843|dbj|BAE21907.1| unnamed protein product [Mus musculus]
Length = 417
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 262/421 (62%), Gaps = 39/421 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SELEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A+ +ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAMSIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLNEKVHPF-VRKSINIIKKYFEEYALVGQDILENKEN 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ EL+ +Q+ S RWE L+ S + +C
Sbjct: 240 WDKILALVP-ETIHDELQRGFQKFHSSPQ--------RWEHLRKVANSSQNMKND--KCG 288
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
E++ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID ++FDP TVPT
Sbjct: 289 PWLEWEVMLQYCFPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDFHKVDQFDPFTVPT 348
Query: 374 LSELLREL------------NTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
+S + REL N DS+ V ++KTSL ++ F FL+ L KS K E
Sbjct: 349 ISAICRELDMVSTHEKEKEENEADSKHRVRG-YKKTSLAPYVKVF-EQFLENLDKSRKGE 406
Query: 422 M 422
+
Sbjct: 407 L 407
>gi|4506051|ref|NP_000937.1| DNA primase small subunit [Homo sapiens]
gi|114644211|ref|XP_001168535.1| PREDICTED: DNA primase small subunit [Pan troglodytes]
gi|397509055|ref|XP_003824952.1| PREDICTED: DNA primase small subunit [Pan paniscus]
gi|1346792|sp|P49642.1|PRI1_HUMAN RecName: Full=DNA primase small subunit; AltName: Full=DNA primase
49 kDa subunit; Short=p49
gi|510406|emb|CAA52377.1| DNA primase (subunit p48) [Homo sapiens]
gi|13528951|gb|AAH05266.1| Primase, DNA, polypeptide 1 (49kDa) [Homo sapiens]
gi|157928534|gb|ABW03563.1| primase, DNA, polypeptide 1 (49kDa) [synthetic construct]
gi|157929174|gb|ABW03872.1| primase, DNA, polypeptide 1 (49kDa) [synthetic construct]
gi|261859960|dbj|BAI46502.1| primase, DNA, polypeptide 1 [synthetic construct]
gi|410207860|gb|JAA01149.1| primase, DNA, polypeptide 1 (49kDa) [Pan troglodytes]
gi|410266144|gb|JAA21038.1| primase, DNA, polypeptide 1 (49kDa) [Pan troglodytes]
gi|410290882|gb|JAA24041.1| primase, DNA, polypeptide 1 (49kDa) [Pan troglodytes]
gi|410338237|gb|JAA38065.1| primase, DNA, polypeptide 1 (49kDa) [Pan troglodytes]
Length = 420
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 269/421 (63%), Gaps = 36/421 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF +R +++++FEE L++Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-IRKSINIIKKYFEEYALVNQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR-- 315
++KIL+++P E++ EL+ +Q +S NS + RWE LK + ++ +
Sbjct: 240 WDKILALVP-ETIHDELQQSFQ---KSHNSLQ-----RWEHLKKVASRYQNNIKNDKYGP 290
Query: 316 -CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+
Sbjct: 291 WLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTI 350
Query: 375 SELLRELNTGDSRM----------DVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
S + REL+ + DV + +++KTSL ++ F FL+ L KS K E
Sbjct: 351 SFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVF-EHFLENLDKSRKGE 409
Query: 422 M 422
+
Sbjct: 410 L 410
>gi|157422866|gb|AAI53662.1| Primase polypeptide 1 [Danio rerio]
Length = 425
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 183/424 (43%), Positives = 266/424 (62%), Gaps = 39/424 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFP + F+W+SYG K+YF REFSFTL +DIY+R+QSF+S+
Sbjct: 12 PDLLPLYYRRLFPFSQYFRWLSYG------GVSKNYFQNREFSFTLKDDIYVRYQSFSSQ 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ELE +++ P KIDIG VYS P++ + G F +E+EL+FDID+TDYDDVR
Sbjct: 66 NELEKEMQKMVPYKIDIGAVYSHRPSQHNTVKSG---TFQALEKELVFDIDMTDYDDVRR 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI+++D ALR+DFGF H+LWVYSGRRGVHCWVCD AR+L+
Sbjct: 123 CCSAADICSKCWTLMTIAIRILDRALREDFGFHHLLWVYSGRRGVHCWVCDDAARKLSVA 182
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R A+A+Y + KG E + +KV P+HPF+ +S + V+ +F + ++ Q++ +E
Sbjct: 183 ARSAVAEYLSLVKGGEETLRKVVLSDPIHPFISQSLS-VVEHYFPQYAIVDQDILGNKES 241
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV-QGLRRC 316
+K+L+++P E + +L +Q N KE + RW++L+ + K +G +
Sbjct: 242 VDKVLALLP-EDIKKDLIEYYQ------NHKEPMK--RWDRLRQLVDHKKSSSKKGGQYY 292
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
+EI+ + YPRLD+ VSK NHLLK+PF VHPKTGR+ +PID K+ + FDP VPT+S
Sbjct: 293 DKEIMLQYCYPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDLKELDTFDPFEVPTISL 352
Query: 377 LLRELNT--GDSRMDVD----------------NEWEKTSLGKSIRFFRSSFLQPLLKSC 418
+ EL D D D ++++TSL K ++ FL + +S
Sbjct: 353 ICEELEKPRADEAEDEDVKDKENEQEAAERRRIRDYKRTSLAKYVKVL-DRFLDSMARSR 411
Query: 419 KEEM 422
K EM
Sbjct: 412 KGEM 415
>gi|200197|gb|AAA39880.1| primase p49 subunit [Mus musculus]
Length = 417
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 262/421 (62%), Gaps = 39/421 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRIQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SELEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A+++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLNEKVHPF-VRKSINIIKKYFEEYALVGQDILENKEN 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ EL+ +Q+ S RWE L+ S + +C
Sbjct: 240 WDKILALVP-ETIHDELQRGFQKFHSSPQ--------RWEHLRKVANSSQNMKND--KCG 288
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
E++ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID ++FDP TVPT
Sbjct: 289 PWLEWEVMLQYCFPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDFHKVDQFDPFTVPT 348
Query: 374 LSELLREL------------NTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
+S + REL N DS+ V ++KTSL ++ F FL+ L KS K E
Sbjct: 349 ISAICRELDMVSTHEKEKEENEADSKHRVRG-YKKTSLAPYVKVF-EQFLENLDKSRKGE 406
Query: 422 M 422
+
Sbjct: 407 L 407
>gi|323454523|gb|EGB10393.1| hypothetical protein AURANDRAFT_58835 [Aureococcus anophagefferens]
Length = 433
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/414 (44%), Positives = 252/414 (60%), Gaps = 27/414 (6%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSYG--NDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
F+ + L++YY RLFP+ + KW++Y D P S +RE S TL +D+Y+R+Q
Sbjct: 16 FDADLLRMYYARLFPYEQMCKWLAYQPHGDASTPVGTGSTLAKRELSLTLADDVYIRYQC 75
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F ++ + ++ P KIDIG V++ P K H + F P EREL+FDID++DYD
Sbjct: 76 FGDAKAMKELMTKRQPHKIDIGAVFNASP-KDHLSIKN----FRPEERELVFDIDLSDYD 130
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
DVR CC GA VC +CW MT A +V +++LR+DFGF+HI+WVYSGRRGVHCWV D ++R+
Sbjct: 131 DVRTCCQGATVCRKCWQYMTCACRVCESSLREDFGFEHIMWVYSGRRGVHCWVGDAESRK 190
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLL--SQNL 251
LTNE R AI YF V GNENS KK PLHP L R+Y ++L F + ++ Q L
Sbjct: 191 LTNEARLAIIKYFSVVGGNENSAKKTDLQAPLHPSLERAY-KLLEPLFIKHVIPEDGQKL 249
Query: 252 FSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQS---GKQ 308
++ E + K+L+ +P E + ++ W +S + +W+ LK S G
Sbjct: 250 LASPEHWSKLLATLP-EDIADQIAKHWARAGDASTPAQ-----KWDALKGLCASPDRGSS 303
Query: 309 KVQGLRRCVE-----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDC 363
+ R V+ E+VF YPRLD VSKHRNHLLK+PF HPKTGRVC+P D K C
Sbjct: 304 AKKQKRAQVDELWKYEVVFTHCYPRLDENVSKHRNHLLKSPFAAHPKTGRVCVPFDAKQC 363
Query: 364 EEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKS 417
FDPT V TL +L ++++ S DV + EKT L ++RFF SF+ PLLKS
Sbjct: 364 AAFDPTAVVTLKDLAKQIDA--STEDVPD-LEKTDLKHAVRFFEKSFIDPLLKS 414
>gi|417400583|gb|JAA47222.1| Putative eukaryotic-type dna primase catalytic small subunit
[Desmodus rotundus]
Length = 418
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 266/419 (63%), Gaps = 34/419 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P++ + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPSQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRS 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A ++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMATRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR ++ ++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSENIHPF-VRKSINIINKYFEEYALVEQDILGNKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
+KIL+++P E++ +L+ +Q++ S RW+ LK L+ K + +
Sbjct: 240 CDKILALVP-ETIRDDLQKIFQKHHSSLQ--------RWKHLKEYLKKNDIKNEKCGPWL 290
Query: 318 E-EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
E EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+S
Sbjct: 291 EWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTISS 350
Query: 377 LLRELN---TGDSRMDVDN----------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
+ EL+ T + D + +++KTSLG I+ F FL+ L KS K E+
Sbjct: 351 ICHELDAIPTNEEEKDENKAESNIKHRTRDYKKTSLGPYIKVF-EQFLENLDKSRKGEL 408
>gi|395540757|ref|XP_003772317.1| PREDICTED: DNA primase small subunit [Sarcophilus harrisii]
Length = 576
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 192/438 (43%), Positives = 274/438 (62%), Gaps = 39/438 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVVKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SE+E I++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SEMEKEIQKLNPYKIDIGAVYSHRPIQHNTVKLG---AFQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI +ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIHIIDRALKEDFGFKHCLWVYSGRRGVHCWVCDETVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG E+ KKV +HPF +R ++ ++FEE LL Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGEDMKKKVHLSPKIHPF-IRKSINIVEKYFEEYALLGQDILENKEN 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQ-KVQGLRRC 316
+ KIL ++P ES+ +EL+ +Q+ S RWE LK + + + + + +
Sbjct: 240 WNKILMLVP-ESLHAELQQGFQKFHNSVQ--------RWEHLKQVVSTYRSVRNEKFGQH 290
Query: 317 VE-EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
++ EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+S
Sbjct: 291 IDWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTIS 350
Query: 376 ELLRELNTGDSR---MDVDNE-----------WEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
++ EL+ S D +NE ++KTSL +R F FL+ L KS K E
Sbjct: 351 QICHELDMVSSNEDDGDKENEAEPDTKRRTRDYKKTSLAPYVRSF-EQFLEELDKSRKGE 409
Query: 422 M---ESGYKAKIQQTKNS 436
+ G KA+ +T ++
Sbjct: 410 LLRKSGGSKARRCRTGSA 427
>gi|213514838|ref|NP_001135348.1| DNA primase small subunit [Salmo salar]
gi|209735110|gb|ACI68424.1| DNA primase small subunit [Salmo salar]
Length = 423
Score = 350 bits (898), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 183/422 (43%), Positives = 265/422 (62%), Gaps = 37/422 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFP + +W++YG K+YF REFSFTL +DIY+R+QSF+++
Sbjct: 12 PDLLPLYYRRLFPFSQYHRWLNYG------GVTKNYFQNREFSFTLKDDIYVRYQSFSTQ 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ELE +++ P KIDIG VYS P + + G F +E+EL+FDID+TDYDDVR
Sbjct: 66 NELEKEMQKMNPYKIDIGAVYSHRPNQHNTVKSGS---FQALEKELVFDIDMTDYDDVRS 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGAD+C +CW LMT+AI+++D ALRDDFGF H LWVYSGRRGVHCWVCD AR+L+
Sbjct: 123 CCSGADICPKCWTLMTIAIRILDRALRDDFGFQHCLWVYSGRRGVHCWVCDEAARKLSVA 182
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R A+A+Y + KG E + +KV P+HPF++ S T V+ +F + LL Q++ ++E
Sbjct: 183 ARSAVAEYLSLVKGGEETVRKVVLSDPIHPFVMESLT-VVERYFSQYALLGQDILGSKEA 241
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
+K+L+++P E V +L +Q + RW+ LK+ Q + +
Sbjct: 242 VDKVLALLP-EDVRKKLLQYFQTEKNPET--------RWDILKSMAQDKRTTAKKGHYFE 292
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
EI+ + YPRLD+ VSK NHLLK+PF VHPKTGR+ +PID ++ + FDP VPT+S +
Sbjct: 293 MEIMLQYCYPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDLRELDCFDPFDVPTISLI 352
Query: 378 LRELN---TGDSRMD-VDNE-------------WEKTSLGKSIRFFRSSFLQPLLKSCKE 420
EL+ T + + D ++NE +++TSL K ++ F FL+ + S K
Sbjct: 353 CEELDQPKTEEEQEDTMENENKKEAGERRKMRDYKRTSLAKYVKLF-DQFLEGMAHSRKG 411
Query: 421 EM 422
E+
Sbjct: 412 EL 413
>gi|354488127|ref|XP_003506222.1| PREDICTED: DNA primase small subunit [Cricetulus griseus]
gi|344256383|gb|EGW12487.1| DNA primase small subunit [Cricetulus griseus]
Length = 419
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 182/417 (43%), Positives = 267/417 (64%), Gaps = 26/417 (6%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSF+++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFSNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ P KIDIG VYS P++ + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SELEKEMQKMNPYKIDIGAVYSHRPSQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV LHPF VR ++R++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKLHPF-VRKSINIIRKYFEEYALVGQDILENKEN 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ EL+ +Q S RWE L+ + S Q ++ +C
Sbjct: 240 WDKILALVP-ETIHEELQRGFQRLHSSPQ--------RWEYLRKVI-STPQNMKN-DKCG 288
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++F+P TVPT
Sbjct: 289 PWLEWEIMVQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDFQKVDQFNPFTVPT 348
Query: 374 LSELLRELNTGDSRMDVDNEWEKTS-LGKSIRFFRSSFLQPLLKSCKEEMESGYKAK 429
+S + REL+ + E E S + +R ++ + L P +K ++ +E+ K++
Sbjct: 349 ISAICRELDVVSTNEKDKEEHEAESEIKHRVRDYKKTSLAPYVKVFEQFLENLDKSR 405
>gi|148692588|gb|EDL24535.1| DNA primase, p49 subunit [Mus musculus]
Length = 417
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 261/421 (61%), Gaps = 39/421 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SELEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A+++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLNEKVHPF-VRKSINIIKKYFEEYALVGQDILENKEN 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P + EL+ +Q+ S RWE L+ S + +C
Sbjct: 240 WDKILALVPS-PIHDELQRGFQKFHSSPQ--------RWEHLRKVANSSQNMKND--KCG 288
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
E++ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID ++FDP TVPT
Sbjct: 289 PWLEWEVMLQYCFPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDFHKVDQFDPFTVPT 348
Query: 374 LSELLREL------------NTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
+S + REL N DS+ V ++KTSL ++ F FL+ L KS K E
Sbjct: 349 ISAICRELDMVSTHEKEKEENEADSKHRVRG-YKKTSLAPYVKVF-EQFLENLDKSRKGE 406
Query: 422 M 422
+
Sbjct: 407 L 407
>gi|225554871|gb|EEH03165.1| DNA primase [Ajellomyces capsulatus G186AR]
Length = 567
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/463 (41%), Positives = 269/463 (58%), Gaps = 64/463 (13%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ +Y RLFP +F+W+ N P+ D FG REF+FTL ND YLR+QSF + L
Sbjct: 100 MYAFYLRLFPFKYLFQWL---NHDVKPSPD---FGNREFAFTLQNDAYLRYQSFPNAELL 153
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
I PS+ +IGPVYS +P R + ++F PV +EL+FDID+TDYDD+R CC+
Sbjct: 154 RKEILHLKPSRFEIGPVYSTNPRDRKTLRKA--SLFKPVSKELVFDIDLTDYDDIRTCCN 211
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A++C +CW +T+AIKVIDTALRDDFGF+HILWVYSGRRG H WVCD +AR L +++R
Sbjct: 212 KANICQKCWAFVTMAIKVIDTALRDDFGFEHILWVYSGRRGAHAWVCDPRARSLPDDRRK 271
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
AIA Y V +G S KKV+ PLHP + RS E+L+ F +L++Q+ FS + E+
Sbjct: 272 AIAGYLEVIRGGSQSGKKVNLKRPLHPHVSRSL-EILKPHFASTILVAQDTFSKPAQAEQ 330
Query: 261 ILSMIPDESVTSELRGKWQEN-RRSSNSK-EDIN-FFRWEQLKNTLQSGKQKV--QGLRR 315
+L+++PD+ + LR KW RSS SK DI+ + + + +G+Q + + L
Sbjct: 331 LLALLPDKPLADALRRKWDSAPERSSTSKWNDIDAVAKSAKSRGAAAAGQQSLDTKALLE 390
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
++I +TYPRLD EVSK HLLK+PF VHP TGRVC+PID + E+FDP +VPT+
Sbjct: 391 AKQDIALEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDIRRVEQFDPLSVPTVG 450
Query: 376 ELLRELNTGD-------------------------------------------SRMDVDN 392
EL+ E+N D S DVD
Sbjct: 451 ELIAEINAWDGGEGGSRENGSNGMNDVVKDEQMAGDVDFDPGAGVGAGGAGLSSAADVDG 510
Query: 393 ------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAK 429
++EKTSL I +FR SF+ LLK+ + +G + +
Sbjct: 511 KGRRVQDYEKTSLKPYIDYFR-SFVAGLLKAERAGAGAGKRGR 552
>gi|240274248|gb|EER37765.1| DNA primase [Ajellomyces capsulatus H143]
Length = 567
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/463 (41%), Positives = 269/463 (58%), Gaps = 64/463 (13%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ +Y RLFP +F+W+ N P+ D FG REF+FTL ND YLR+QSF + L
Sbjct: 100 MYAFYLRLFPFKYLFQWL---NHDVKPSPD---FGNREFAFTLQNDAYLRYQSFPNAELL 153
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
I PS+ +IGPVYS +P R + ++F PV +EL+FDID+TDYDD+R CC+
Sbjct: 154 RKEILHLKPSRFEIGPVYSTNPRDRKTLRKA--SLFKPVSKELVFDIDLTDYDDIRTCCN 211
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A++C +CW +T+AIKVIDTALRDDFGF+HILWVYSGRRG H WVCD +AR L +++R
Sbjct: 212 KANICQKCWTFVTMAIKVIDTALRDDFGFEHILWVYSGRRGAHAWVCDPRARSLPDDRRK 271
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
AIA Y V +G S KKV+ PLHP + RS E+L+ F +L++Q+ FS + E+
Sbjct: 272 AIAGYLEVIRGGSQSGKKVNLKRPLHPHVSRSL-EILKPHFASTILVAQDTFSNPAQAEQ 330
Query: 261 ILSMIPDESVTSELRGKWQEN-RRSSNSK-EDIN-FFRWEQLKNTLQSGKQKV--QGLRR 315
+L+++PD+ + LR KW RSS SK DI+ + + + +G+Q + + L
Sbjct: 331 LLALLPDKPLADALRRKWDSAPERSSTSKWNDIDAVAKSAKSRGAAAAGQQSLDTKALLE 390
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
++I +TYPRLD EVSK HLLK+PF VHP TGRVC+PID + E+FDP +VPT+
Sbjct: 391 AKQDIALEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDIRRVEQFDPLSVPTVG 450
Query: 376 ELLRELNTGD-------------------------------------------SRMDVDN 392
EL+ E+N D S DVD
Sbjct: 451 ELIAEINAWDGGEGGSRENGSNGTNDVVKDEQIAGDVDFDPGAGVGAGGAGLSSAADVDG 510
Query: 393 ------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAK 429
++EKTSL I +FR SF+ LLK+ + +G + +
Sbjct: 511 KGRRVQDYEKTSLKPYIDYFR-SFVAGLLKAERAGAGAGKRGR 552
>gi|301761029|ref|XP_002916042.1| PREDICTED: DNA primase small subunit-like [Ailuropoda melanoleuca]
Length = 419
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/420 (43%), Positives = 266/420 (63%), Gaps = 35/420 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRG+HCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGIHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VRS +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-VRSSINIIKKYFEEYALVDQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTL--QSGKQKVQGLRR 315
++KIL+++P S + K Q+N + +S + RWE LK + Q + +
Sbjct: 240 WDKILALVP-----SPIHEKLQQNFQKCHS----SLQRWEYLKQGINCQDNTKNDKCGPW 290
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+S
Sbjct: 291 LEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTIS 350
Query: 376 ELLRELNT----------GDSRMDVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
+ EL+ ++ D+ + +++KTSL I+ F FL+ L KS K E+
Sbjct: 351 SICHELDAISINDEGREGNEAESDIKHRTRDYKKTSLAPYIKVF-EQFLEKLDKSRKGEL 409
>gi|291409307|ref|XP_002720962.1| PREDICTED: DNA primase polypeptide 1 [Oryctolagus cuniculus]
Length = 420
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/422 (43%), Positives = 267/422 (63%), Gaps = 38/422 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVVKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
++LE +++ P KIDIG VYS P++ G F E+EL+FDID+TDYDDVR
Sbjct: 64 NDLEKEMQKMNPYKIDIGAVYSHRPSQHSTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI +ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAILIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF+ RS +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLNEKVHPFVRRS-INIIKKYFEEYALVGQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ ++L+ +Q+ S RWE LK T+ + + +C
Sbjct: 240 WDKILALVP-EAIHADLQQGFQKCHSSLQ--------RWEHLKKTIAKHQNNTKN-DKCA 289
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PI+ + ++FDP TVPT
Sbjct: 290 PWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPINLQKVDQFDPFTVPT 349
Query: 374 LSELLRELNTGDSRM----------DVD---NEWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
+S + REL+ + D+ +++KTSL ++ F FL+ L KS K
Sbjct: 350 ISSICRELDAISNNEEEKEENEAESDIKRRTRDYKKTSLAPYVKVF-EQFLENLDKSRKG 408
Query: 421 EM 422
E+
Sbjct: 409 EL 410
>gi|326427822|gb|EGD73392.1| DNA primase [Salpingoeca sp. ATCC 50818]
Length = 369
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/373 (45%), Positives = 243/373 (65%), Gaps = 26/373 (6%)
Query: 12 IPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRF 71
+ DG P L+ YY RLFP+ F+W+SYG+ + F REFSFTL +D+Y+R+
Sbjct: 1 MSDGDFPQLLQQYYARLFPYTKYFRWLSYGSTDK-------VFQNREFSFTLKDDVYVRY 53
Query: 72 QSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
QSF ++L+ +I+ KCP KIDIG VY+ P K H + + F PV++EL+FDID+TD
Sbjct: 54 QSFTDLADLKQAIQAKCPYKIDIGAVYTTKP-KDHKKVKASE--FYPVQKELVFDIDMTD 110
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YD++R CCSGA +C +CWP MT A+KV+D ALR+DFGF H+LWVYSGRRG+HCWVCD +A
Sbjct: 111 YDEIRTCCSGAAICHKCWPFMTAALKVLDKALREDFGFQHLLWVYSGRRGIHCWVCDERA 170
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS--Q 249
R LT E RGA+A+Y ++ G++ KV P P +P R++ ++L+ +F +L + Q
Sbjct: 171 RMLTQEGRGAVAEYLQLVSGSDQMACKVHVP-PSYPAATRAF-DILKPYFHSTVLSADGQ 228
Query: 250 NLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQK 309
+L + E+ +L + D S+T +L +W + RSS K W ++ ++ K+
Sbjct: 229 DLLNHAEQRRALLGVFEDSSMTDDLESRWTGDTRSSEHK-------WADVEKAAKAAKK- 280
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPT 369
R ++ I TYPRLD+ VSK NHLLK+PF VHPKTGRVC+PIDP+ + FDP
Sbjct: 281 ----RSKLQAITLQHTYPRLDIHVSKGLNHLLKSPFVVHPKTGRVCVPIDPETADSFDPL 336
Query: 370 TVPTLSELLRELN 382
VPT+ +LL E +
Sbjct: 337 AVPTIQQLLTEFD 349
>gi|154281283|ref|XP_001541454.1| DNA primase small subunit [Ajellomyces capsulatus NAm1]
gi|150411633|gb|EDN07021.1| DNA primase small subunit [Ajellomyces capsulatus NAm1]
Length = 567
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/463 (41%), Positives = 268/463 (57%), Gaps = 64/463 (13%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ +Y RLFP +F+W+ N P+ D FG REF+FTL ND YLR+QSF + L
Sbjct: 100 MYAFYLRLFPFKYLFQWL---NHDVKPSPD---FGNREFAFTLQNDAYLRYQSFPNAELL 153
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
I PS+ +IGPVYS +P R + ++F PV +EL+FDID+TDYDD+R CC+
Sbjct: 154 RKEILHLNPSRFEIGPVYSTNPRDRKTLRKA--SLFKPVSKELVFDIDLTDYDDIRTCCN 211
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A++C +CW +T+AIKVIDTALRDDFGF+HILWVYSGRRG H WVCD +AR L +++R
Sbjct: 212 KANICQKCWAFVTMAIKVIDTALRDDFGFEHILWVYSGRRGAHAWVCDPRARSLPDDRRK 271
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
AIA Y V +G S KKV+ PLHP + RS E+L+ F +L++Q+ FS + E+
Sbjct: 272 AIAGYLEVIRGGSQSGKKVNLKRPLHPHVARSL-EILKPHFASTILVAQDTFSNPAQAEQ 330
Query: 261 ILSMIPDESVTSELRGKWQEN-RRSSNSK-EDIN-FFRWEQLKNTLQSGKQKV--QGLRR 315
+L+++PD+ + LR KW RSS SK DI+ + + + +G+Q + + L
Sbjct: 331 LLALLPDKPLADALRRKWDSAPERSSTSKWNDIDAVAKSAKSRGAAAAGQQSLDTKALLE 390
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
++I +TYPRLD EVSK HLLK+PF VHP TGRVC+PID + E FDP +VPT+
Sbjct: 391 AKQDIALEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDIRRVELFDPLSVPTVG 450
Query: 376 ELLRELNTGD-------------------------------------------SRMDVDN 392
EL+ E+N D S DVD
Sbjct: 451 ELIAEINAWDGGEGGSRENGSNGANDVVKDEQTAGDVDFDPGAGVGAGGAGLSSAADVDG 510
Query: 393 ------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAK 429
++EKTSL I +FR SF+ LLK+ + +G + +
Sbjct: 511 KGRRVQDYEKTSLKPYIDYFR-SFVAGLLKAERAGAGTGKRGR 552
>gi|67525151|ref|XP_660637.1| hypothetical protein AN3033.2 [Aspergillus nidulans FGSC A4]
gi|40744428|gb|EAA63604.1| hypothetical protein AN3033.2 [Aspergillus nidulans FGSC A4]
gi|259486020|tpe|CBF83530.1| TPA: DNA primase subunit Pri1, putative (AFU_orthologue;
AFUA_3G09020) [Aspergillus nidulans FGSC A4]
Length = 521
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/377 (44%), Positives = 244/377 (64%), Gaps = 17/377 (4%)
Query: 12 IPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRF 71
+P + + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+
Sbjct: 83 VPVQVDTETMLQFYQRLFPFRYLFQWL---NHGIVPSPD---FGNREFALTLQNDAYLRY 136
Query: 72 QSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
QS+ + I + PS+ +IGPVY+ +P R G P+ +EL+FDID+TD
Sbjct: 137 QSYPTADLFRKDILKMNPSRFEIGPVYNRNPRDRKTLGSGQ---LKPLAKELVFDIDLTD 193
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YDD+R CC+ A++C +CW +T+AIKV+DTALR DFGF HILWVYSGRRG H WVCD +A
Sbjct: 194 YDDIRTCCTKANICAKCWAFVTMAIKVVDTALRQDFGFQHILWVYSGRRGAHAWVCDSRA 253
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNL 251
R L++++R IA Y + +G NS K+V+ PLHP + RS E+L+ +F + L+ Q+
Sbjct: 254 RNLSDDRRRGIAGYLDLVRGGTNSGKRVNLKRPLHPHMTRSL-EILKPYFVQTTLVDQDT 312
Query: 252 FSTEERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQK 309
F++ E+ +++LS++PD+ + LR KW+ +R S+N DI+ +TL
Sbjct: 313 FASPEQEQRLLSLLPDKGLNDSLRRKWESAPDRSSTNKWADIDALAKAGKSSTLNPAT-- 370
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPT 369
LR ++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PID ++ E+FDP
Sbjct: 371 ---LREAKQDIVLEYTYPRLDSEVSKKMIHLLKSPFVIHPGTGRVCVPIDIRNVEKFDPL 427
Query: 370 TVPTLSELLRELNTGDS 386
+VPT+S+LL E+++ DS
Sbjct: 428 SVPTVSQLLSEIDSWDS 444
>gi|296804828|ref|XP_002843262.1| DNA primase small subunit [Arthroderma otae CBS 113480]
gi|238845864|gb|EEQ35526.1| DNA primase small subunit [Arthroderma otae CBS 113480]
Length = 533
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/433 (42%), Positives = 257/433 (59%), Gaps = 42/433 (9%)
Query: 3 IDGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFT 62
I P Q V +P + +Y RLFP +F+W+ N G P+ D FG REF+FT
Sbjct: 90 IQIPNQPAVPSTQVDPESMSAFYQRLFPFKYLFQWL---NHGVKPSTD---FGNREFAFT 143
Query: 63 LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERE 122
L ND YLR+QSF + L + PS+ +IGPVYS +P R + + G F P+ +E
Sbjct: 144 LPNDAYLRYQSFQTADTLHKDVMRLNPSRFEIGPVYSTNPRDRKSLRKPG--AFKPISKE 201
Query: 123 LIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGV 182
L+FDID+TDYDD+R CCS A++C +CW +T++IKVID ALR+DFGF+HILWVYSGRRG
Sbjct: 202 LVFDIDLTDYDDIRTCCSKANICEKCWAFVTMSIKVIDAALREDFGFEHILWVYSGRRGA 261
Query: 183 HCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFE 242
H WVCD KAR L +++R AIA Y V +G S K+V+ PLHP + RS + LRE+F
Sbjct: 262 HAWVCDKKARNLPDDRRRAIAGYLEVVRGGSQSGKRVNLRRPLHPHITRSL-DTLREYFA 320
Query: 243 EKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLK 300
+L+ Q+ FS ++ ++L ++PD+++ + L+ KW + R S N DI+ +
Sbjct: 321 STVLVDQDPFSRPDQASRLLELLPDKTLRTALQKKWDSSPGRHSRNKWADIDAVAKTNCR 380
Query: 301 NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP 360
+ L ++IV +TYPRLD EVSK HLLK+PF VHP TGRVC+PI+
Sbjct: 381 GL------DTKALLEAKQDIVLEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPINI 434
Query: 361 KDCEEFDPTTVPTLSELLRELNT-----------------GDSRMDVD--------NEWE 395
+ ++F+P PTL++LL E+N+ G + + D ++E
Sbjct: 435 QKVDKFNPLKTPTLAQLLDEINSWNPSQANQQDQMPASDGGSGQDETDAGPKPKKIQDYE 494
Query: 396 KTSLGKSIRFFRS 408
KTSL I +FRS
Sbjct: 495 KTSLKPYIDYFRS 507
>gi|296212055|ref|XP_002752664.1| PREDICTED: DNA primase small subunit [Callithrix jacchus]
Length = 420
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/422 (43%), Positives = 262/422 (62%), Gaps = 38/422 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYVRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL +DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICPKCWTLMTMAIRIIDRALEEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF +R ++ ++FEE L++Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-IRKSINIINKYFEEYALVNQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ EL+ +Q++ S RWE LK + ++ +C
Sbjct: 240 WDKILALVP-ETIRDELQQSFQKSHSSLQ--------RWEHLKKAASKCQNNIKN-DKCG 289
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID ++FDP TVPT
Sbjct: 290 PWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLHTLDQFDPFTVPT 349
Query: 374 LSELLRELNTGDSRMDVDNE-------------WEKTSLGKSIRFFRSSFLQPLLKSCKE 420
+S + EL+ + D E ++KTSL ++ F FL+ L KS K
Sbjct: 350 ISLICHELDAISTNEDKKQENEAESDIKHRTRDYKKTSLAPYVKVF-ECFLENLDKSRKG 408
Query: 421 EM 422
E+
Sbjct: 409 EL 410
>gi|326478642|gb|EGE02652.1| DNA primase small subunit [Trichophyton equinum CBS 127.97]
Length = 520
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/420 (43%), Positives = 253/420 (60%), Gaps = 44/420 (10%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P + +Y RLFP +F+W+ N G P+ D FG REF+FTL ND YLR+QSF +
Sbjct: 91 DPESMSAFYQRLFPFKYLFQWL---NHGVKPSTD---FGNREFAFTLPNDAYLRYQSFQT 144
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + G F P+ +EL+FDID+TDYDD+R
Sbjct: 145 ADALHKEVMRLNPSRFEIGPVYSTNPRDRKTLRKPG--AFKPIAKELVFDIDLTDYDDIR 202
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CCS A++CL+CW +T++IKVID ALRDDFGF HILWVYSGRRG H WVCD AR L +
Sbjct: 203 TCCSKANICLKCWAFVTMSIKVIDAALRDDFGFQHILWVYSGRRGAHAWVCDKVARNLPD 262
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G S K+V+ PLHP + RS + LRE+F +L+ Q+ FS +
Sbjct: 263 DRRRAIAGYLEVVRGGSQSGKRVNLRRPLHPHITRS-IDTLREYFASTVLVDQDPFSRPD 321
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQKV--QGL 313
+ +++ ++PD+++ + L+ KW RSS+SK W + ++ + + + L
Sbjct: 322 QAARLIELLPDKTLRAALQKKWDSAPGRSSSSK-------WADIDTVAKANSRGLDTKAL 374
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
++IV +TYPRLD EVSK HLLK+PF VHP TGRVC+PID + ++F+P PT
Sbjct: 375 LEAKQDIVLEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDIEKLDDFNPLDTPT 434
Query: 374 LSELLRELNT--------------GDSRMDVD-----------NEWEKTSLGKSIRFFRS 408
L +LL E+N+ DS D ++EKTSL I +FRS
Sbjct: 435 LFQLLDEINSWNPSQANQQDKTPGSDSGSGQDETGTAAKPRKIQDYEKTSLKPYIDYFRS 494
>gi|392868939|gb|EAS30291.2| DNA primase small subunit [Coccidioides immitis RS]
Length = 533
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/387 (46%), Positives = 244/387 (63%), Gaps = 20/387 (5%)
Query: 3 IDGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFT 62
I G + P + + +Y RLFP +F+W+ N G P+ D FG REF+FT
Sbjct: 85 IVGDRNPGPQPAKIDMETMYAFYQRLFPFKYLFQWL---NHGIKPSVD---FGNREFAFT 138
Query: 63 LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERE 122
L ND YLR+QS+ + L I PS+ +IGPVYS +P R + + + F PV +E
Sbjct: 139 LQNDAYLRYQSYPTAEGLRKDILRLNPSRFEIGPVYSTNPRDRKSLRKS--SAFRPVSKE 196
Query: 123 LIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGV 182
L+FDID+TDYDD+R CC A++C +CW +T+AIKVID ALRDDFGF+HILWVYSGRRG
Sbjct: 197 LVFDIDLTDYDDIRTCCEKANICPKCWAFVTMAIKVIDRALRDDFGFEHILWVYSGRRGA 256
Query: 183 HCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFE 242
H WVCD +AR LT+E+R AIA Y V +G S K+V+ PLHP + RS +L +F
Sbjct: 257 HAWVCDQRARNLTDERRKAIAGYLEVVRGGAQSGKRVNLKRPLHPHVERSRN-ILIPYFR 315
Query: 243 EKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKN 301
+L +Q+ FS+ ++ ++L IPD+S+ L+ KW+ R S+SK W + +
Sbjct: 316 STILNNQDTFSSSDQAARLLQFIPDKSLKDALQKKWESAPSRGSSSK-------WSDIDD 368
Query: 302 TLQ-SGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
+ SG Q + + L E+I+ +TYPRLD EVSK HLLK+PF VHP TGRVC+PI
Sbjct: 369 VAKASGNQGLDTKALLEAKEDIILEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPI 428
Query: 359 DPKDCEEFDPTTVPTLSELLRELNTGD 385
D K E+F+P VPT++ELL E+N D
Sbjct: 429 DVKRVEQFNPLEVPTVAELLDEINAWD 455
>gi|355564374|gb|EHH20874.1| DNA primase small subunit [Macaca mulatta]
gi|383419791|gb|AFH33109.1| DNA primase small subunit [Macaca mulatta]
Length = 420
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 269/421 (63%), Gaps = 36/421 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF +R +++++FEE L++Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-IRKSINIIKKYFEEYALVNQDILKNKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR-- 315
++KIL+++P E + EL+ +Q +S NS + RWE LK + ++ +
Sbjct: 240 WDKILALVP-EIIHDELQQGFQ---KSHNSLQ-----RWEHLKKVASRCQNNIKNDKYGP 290
Query: 316 -CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+
Sbjct: 291 WLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTI 350
Query: 375 SELLRELNT----------GDSRMDVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
S + REL+ ++ DV + +++KTSL ++ F FL+ L KS K E
Sbjct: 351 SFICRELDAISINEEEKEENEAESDVKHRTRDYKKTSLAPYVKVF-EHFLENLDKSRKGE 409
Query: 422 M 422
+
Sbjct: 410 L 410
>gi|327306435|ref|XP_003237909.1| DNA primase subunit Pri1 [Trichophyton rubrum CBS 118892]
gi|326460907|gb|EGD86360.1| DNA primase subunit Pri1 [Trichophyton rubrum CBS 118892]
Length = 521
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/420 (42%), Positives = 252/420 (60%), Gaps = 44/420 (10%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W+ N G P+ D FG REF+FTL ND YLR+QSF +
Sbjct: 92 DPEFMSAFYQRLFPFKYLFQWL---NHGVKPSTD---FGNREFAFTLPNDAYLRYQSFQT 145
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + G F PV +EL+FDID+TDYDD+R
Sbjct: 146 ADALHKDVMRLNPSRFEIGPVYSTNPRDRKTLRKPG--AFKPVSKELVFDIDLTDYDDIR 203
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CCS A++CL+CW +T++IKVID ALR+DFGF HILWVYSGRRG H WVCD AR L +
Sbjct: 204 TCCSKANICLKCWAFVTMSIKVIDAALREDFGFQHILWVYSGRRGAHAWVCDKSARNLPD 263
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G S K+V+ PLHP + RS L E+F +L+ Q+ FS +
Sbjct: 264 DRRRAIAGYLEVVRGGSQSGKRVNLRRPLHPHITRSLN-TLGEYFASTVLVDQDPFSRPD 322
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQKV--QGL 313
+ +++ ++PD+++ + L+ KW RSS+SK W + ++ + + + L
Sbjct: 323 QAARLIELLPDKTLRAALQKKWDSAPGRSSSSK-------WADIDTVAKANSRGLDTKAL 375
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
++IV +TYPRLD EVSK HLLK+PF VHP TGRVC+PID K + F+P PT
Sbjct: 376 LEAKQDIVLEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDIKKVDNFNPLDTPT 435
Query: 374 LSELLRELN-----------------TGDSRMDVDN--------EWEKTSLGKSIRFFRS 408
L +LL E+N +G + + D ++EKTSL I +FRS
Sbjct: 436 LFQLLDEINSWNPSQANQQDQMPGSDSGSGQDETDTAAKPRKIQDYEKTSLKPYIDYFRS 495
>gi|303315415|ref|XP_003067715.1| DNA primase small subunit, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240107385|gb|EER25570.1| DNA primase small subunit, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 520
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 174/378 (46%), Positives = 240/378 (63%), Gaps = 20/378 (5%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
P + + +Y RLFP +F+W+ N G P+ D FG REF+FTL ND YLR+Q
Sbjct: 82 PAKIDTETMYAFYQRLFPFKYLFQWL---NHGIKPSVD---FGNREFAFTLQNDAYLRYQ 135
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY 132
S+ + L I PS+ +IGPVYS +P R + + + F PV +EL+FDID+TDY
Sbjct: 136 SYPTAEGLRKDILRLNPSRFEIGPVYSTNPRDRKSLRKS--SAFRPVSKELVFDIDLTDY 193
Query: 133 DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKAR 192
DD+R CC A++C +CW +T+AIKVID ALRDDFGF+HILWVYSGRRG H WVCD +AR
Sbjct: 194 DDIRTCCEKANICPKCWAFVTMAIKVIDRALRDDFGFEHILWVYSGRRGAHAWVCDQRAR 253
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
LT+E+R AIA Y V +G S K+V+ PLHP + RS +L +F +L +Q+ F
Sbjct: 254 NLTDERRKAIAGYLEVVRGGAQSGKRVNLKRPLHPHVERSRN-ILIPYFRSTILNNQDTF 312
Query: 253 STEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQK-- 309
S+ ++ ++L IPD+S+ L+ KW+ R S+SK W + + ++ +
Sbjct: 313 SSSDQAARLLQFIPDKSLKDALQKKWESAPSRGSSSK-------WSDIDDVAKASGNRDL 365
Query: 310 -VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+ L E+I+ +TYPRLD EVSK HLLK+PF VHP TGRVC+PID K E+F+P
Sbjct: 366 DTKALLEAKEDIILEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDVKRVEQFNP 425
Query: 369 TTVPTLSELLRELNTGDS 386
VPT++ELL E+N D+
Sbjct: 426 LEVPTVAELLDEINAWDT 443
>gi|307204968|gb|EFN83507.1| DNA primase small subunit [Harpegnathos saltator]
Length = 543
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/431 (42%), Positives = 259/431 (60%), Gaps = 38/431 (8%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ L VYY RLFP AD ++W+SYGN G F +REFSFTL +DIY+R+QSFN +
Sbjct: 9 DLLPVYYSRLFPFADYYRWLSYGNAG--------VFSKREFSFTLSDDIYIRYQSFNDQK 60
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
L + IK P KIDIG VY+ P + + G N F PVEREL+FDID+TDYD+VR C
Sbjct: 61 GLSDEIKRLLPHKIDIGAVYNAQPKDQ----KRGHN-FQPVERELVFDIDMTDYDEVRTC 115
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C GAD+C++CW M++A K++D+ALR DFG+ HILWV+SGRRG+HCWVCD AR L+ +
Sbjct: 116 CKGADICIKCWKFMSLACKILDSALRSDFGYKHILWVFSGRRGIHCWVCDSLARSLSGQV 175
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R A+A+Y ++ G E KKV ++ +++ F E + QN+ TEE
Sbjct: 176 RAAVAEYLQIIGGGEFMKKKVHLTSDKIHHSIKRALDIIDPIFIEMCIKEQNILGTEEGI 235
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWE---QLKNTLQSGKQKVQGLRR 315
EK L ++P++ E++ + SKE + RW Q + ++G K R
Sbjct: 236 EKFLPILPNDEDRQEVKVLF--------SKESTSEARWNAFVQYVESKRTGGGKWYLYRH 287
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
VEE+ ++YPRLD+ VSK NHLLK+PFCVHPKTG++CIP + ++FDP VPT+
Sbjct: 288 LVEEVKLQYSYPRLDINVSKGLNHLLKSPFCVHPKTGKICIPFNANAVDKFDPDKVPTIM 347
Query: 376 ELLRELNTGDSRMDVDNE-----------WEKTSLGKSIRFFRSSFLQPLLKSCKEEMES 424
L+ E+N D + + E ++KTSL KS+ F+ FL+ L +E+
Sbjct: 348 TLIEEINVYDVKDKAEEETYDLNKKRIKDYKKTSLNKSLHVFQ-EFLRHLEAERREQRLK 406
Query: 425 GYKAKIQQTKN 435
G + +QT N
Sbjct: 407 GKRK--EQTVN 415
>gi|320035447|gb|EFW17388.1| DNA primase [Coccidioides posadasii str. Silveira]
Length = 533
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 176/388 (45%), Positives = 243/388 (62%), Gaps = 20/388 (5%)
Query: 3 IDGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFT 62
I G + P + + +Y RLFP +F+W+ N G P+ D FG REF+FT
Sbjct: 85 IVGDRNPGPQPAKIDTETMYAFYQRLFPFKYLFQWL---NHGIKPSVD---FGNREFAFT 138
Query: 63 LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERE 122
L ND YLR+QS+ + L I PS+ +IGPVYS +P R + + + F PV +E
Sbjct: 139 LQNDAYLRYQSYPTAEGLRKDILRLNPSRFEIGPVYSTNPRDRKSLRKS--SAFRPVSKE 196
Query: 123 LIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGV 182
L+FDID+TDYDD+R CC A++C +CW +T+AIKVID ALRDDFGF+HILWVYSGRRG
Sbjct: 197 LVFDIDLTDYDDIRTCCEKANICPKCWAFVTMAIKVIDRALRDDFGFEHILWVYSGRRGA 256
Query: 183 HCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFE 242
H WVCD +AR LT+E+R AIA Y V +G S K+V+ PLHP + RS +L +F
Sbjct: 257 HAWVCDQRARNLTDERRKAIAGYLEVVRGGAQSGKRVNLKRPLHPHVERSRN-ILIPYFR 315
Query: 243 EKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKN 301
+L +Q+ FS+ ++ ++L IPD+S+ L+ KW+ R S+SK W + +
Sbjct: 316 STILNNQDTFSSSDQAARLLQFIPDKSLKDALQKKWESAPSRGSSSK-------WSDIDD 368
Query: 302 TLQSGKQK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
++ + + L E+I+ +TYPRLD EVSK HLLK+PF VHP TGRVC+PI
Sbjct: 369 VAKASGNRDLDTKALLEAKEDIILEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPI 428
Query: 359 DPKDCEEFDPTTVPTLSELLRELNTGDS 386
D K E+F+P VPT++ELL E+N D+
Sbjct: 429 DVKRVEQFNPLEVPTVAELLDEINAWDT 456
>gi|156373737|ref|XP_001629467.1| predicted protein [Nematostella vectensis]
gi|156216468|gb|EDO37404.1| predicted protein [Nematostella vectensis]
Length = 415
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 174/394 (44%), Positives = 255/394 (64%), Gaps = 27/394 (6%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P L+ YY LFP+ +W+SYG+ K+YF REFSFTL +D+YLR+QSF S+
Sbjct: 20 PELLQQYYKWLFPYKLYHQWLSYGD------VPKTYFPNREFSFTLKDDVYLRYQSFASQ 73
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
E+E I+++ P KIDIG V+S P K H + F +E+EL+FDID+TDYD++R
Sbjct: 74 EEMEKEIQKRNPHKIDIGAVFSHKP-KDHKMVKAAS--FQALEKELVFDIDMTDYDEIRT 130
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CC GA++CL+CW M +AIKV+D AL++DFGF H LWVYSGRRGVHCWVCD AR+L+
Sbjct: 131 CCKGAEICLKCWKFMVIAIKVLDLALKEDFGFKHRLWVYSGRRGVHCWVCDETARKLSQS 190
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R A+A+Y + KG EN KKV+ P HPF+ RS + +++++F + +L Q + S++E
Sbjct: 191 GRSAVAEYLTIIKGGENQAKKVNIREPYHPFIKRSLS-LVKKYFNDIVLDGQEILSSKET 249
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++ +L+++ +S +S + + RWE+L S QK+Q + +
Sbjct: 250 WDPLLALL----------------NKSWSSCKKSSSERWEELTVMCTSFFQKMQSM-EVI 292
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
+EI+ +TYPRLD+ V+K NHLLK+PFC+HPKTGRVC+PI+ + FDP VPT+S+L
Sbjct: 293 DEIMLQYTYPRLDVNVTKGLNHLLKSPFCIHPKTGRVCVPIEVATADLFDPFAVPTISQL 352
Query: 378 LRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFL 411
L +++ D + DN E + + IR F+ + L
Sbjct: 353 LNQIDEYDKKHPNDNSDEDIAGKRKIRAFQKTSL 386
>gi|158295264|ref|XP_316116.4| AGAP006065-PA [Anopheles gambiae str. PEST]
gi|157015952|gb|EAA11680.4| AGAP006065-PA [Anopheles gambiae str. PEST]
Length = 429
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 259/419 (61%), Gaps = 32/419 (7%)
Query: 16 FNPNYLK----VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRF 71
F+PN L+ +YY RLFPH ++WMSYG + S F REFSFTL +DIY+R+
Sbjct: 15 FDPNILQDLLPLYYKRLFPHKQFYRWMSYGRS------ESSVFSNREFSFTLQDDIYIRY 68
Query: 72 QSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
QSF ++ ELE I K P KIDIG VY++ P K H G PV+REL+FDID+TD
Sbjct: 69 QSFETQQELEREICSKAPFKIDIGAVYNIRP-KDHR----GSTAIQPVQRELVFDIDMTD 123
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YDD+R CC+ A+VC CW M++A +V+D ALR+DFGF+H+LWV+SGRRG+HCWV D A
Sbjct: 124 YDDIRTCCNEANVCQLCWKFMSIACRVLDEALREDFGFEHLLWVFSGRRGIHCWVSDKAA 183
Query: 192 RRLTNEQRGAIADYFRVY-KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQN 250
R L R AIA Y + G E + +V +H + R+Y ++ FEE L+ QN
Sbjct: 184 RHLDTAARSAIAMYLNLLISGGEGTASRVIIHDEMHHSVRRAY-RIVAPLFEEICLVDQN 242
Query: 251 LFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNS--KEDINFFRWEQLKNTLQSGKQ 308
+F E K+L+++ D SV +EL +++ S KE + +F ++L+ +
Sbjct: 243 MFGKPEGVRKLLALVQDASVRAELEKRFKAVANDSKGVWKEFVAYF--DELR--MSGNSN 298
Query: 309 KVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+ + + VEE+ AFTYPRLD+ V+K NHLLK+PFCVHPKTG+VCIP +P +FDP
Sbjct: 299 RYRRFKFIVEEVTLAFTYPRLDINVTKGFNHLLKSPFCVHPKTGKVCIPFNPNIASKFDP 358
Query: 369 TTVPTLSELLRELNTGDSRMDVDNE--------WEKTSLGKSIRFFRSSFLQPLLKSCK 419
T VPT+ +LL+E+N D + V+ E ++KTS+ K F FL+ L ++ K
Sbjct: 359 TDVPTIIDLLKEVNAFDEKNTVEGEENRSKIKDYKKTSMFKGTVIF-EEFLRKLEQTFK 416
>gi|343887397|ref|NP_001230598.1| DNA primase small subunit [Sus scrofa]
Length = 419
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 177/411 (43%), Positives = 258/411 (62%), Gaps = 24/411 (5%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+Y REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVVKNYLQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SELEKEVQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI +ID AL++DFGF H WVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIHIIDRALKEDFGFKHRPWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FEE L+ QN+ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLNEKIHPF-VRKSINIIKKYFEEYALVGQNILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ EL+ +Q+++ S RWE LK S Q +C
Sbjct: 240 WDKILALVP-ETMHDELQQSFQKHQNSLQ--------RWEYLKKA-ASRYQNNSKNDKCG 289
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT
Sbjct: 290 PWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPT 349
Query: 374 LSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMES 424
+S + EL+ + + ++ + R ++ + L P +K ++ +E+
Sbjct: 350 ISSICHELDAISTNEEEKENGAESGIKHRTRDYKKTSLAPFVKVFEQFLEN 400
>gi|119190973|ref|XP_001246093.1| hypothetical protein CIMG_05534 [Coccidioides immitis RS]
Length = 520
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/377 (46%), Positives = 241/377 (63%), Gaps = 20/377 (5%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
P + + +Y RLFP +F+W+ N G P+ D FG REF+FTL ND YLR+Q
Sbjct: 82 PAKIDMETMYAFYQRLFPFKYLFQWL---NHGIKPSVD---FGNREFAFTLQNDAYLRYQ 135
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY 132
S+ + L I PS+ +IGPVYS +P R + + + F PV +EL+FDID+TDY
Sbjct: 136 SYPTAEGLRKDILRLNPSRFEIGPVYSTNPRDRKSLRKS--SAFRPVSKELVFDIDLTDY 193
Query: 133 DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKAR 192
DD+R CC A++C +CW +T+AIKVID ALRDDFGF+HILWVYSGRRG H WVCD +AR
Sbjct: 194 DDIRTCCEKANICPKCWAFVTMAIKVIDRALRDDFGFEHILWVYSGRRGAHAWVCDQRAR 253
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
LT+E+R AIA Y V +G S K+V+ PLHP + RS +L +F +L +Q+ F
Sbjct: 254 NLTDERRKAIAGYLEVVRGGAQSGKRVNLKRPLHPHVERSRN-ILIPYFRSTILNNQDTF 312
Query: 253 STEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQ-SGKQKV 310
S+ ++ ++L IPD+S+ L+ KW+ R S+SK W + + + SG Q +
Sbjct: 313 SSSDQAARLLQFIPDKSLKDALQKKWESAPSRGSSSK-------WSDIDDVAKASGNQGL 365
Query: 311 --QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+ L E+I+ +TYPRLD EVSK HLLK+PF VHP TGRVC+PID K E+F+P
Sbjct: 366 DTKALLEAKEDIILEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDVKRVEQFNP 425
Query: 369 TTVPTLSELLRELNTGD 385
VPT++ELL E+N D
Sbjct: 426 LEVPTVAELLDEINAWD 442
>gi|326470458|gb|EGD94467.1| DNA primase subunit Pri1 [Trichophyton tonsurans CBS 112818]
Length = 520
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 181/420 (43%), Positives = 253/420 (60%), Gaps = 44/420 (10%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P + +Y RLFP +F+W+ N G P+ D FG REF+FTL ND YLR+QSF +
Sbjct: 91 DPESMSAFYQRLFPFKYLFQWL---NHGVKPSTD---FGNREFAFTLPNDAYLRYQSFQT 144
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS +P R + G F P+ +EL+FDID+TDYDD+R
Sbjct: 145 ADALHKEVIRLNPSRFEIGPVYSTNPRDRKTLRKPG--AFKPIAKELVFDIDLTDYDDIR 202
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CCS A++CL+CW +T++IKVID ALRDDFGF HILWVYSGRRG H WVCD AR L +
Sbjct: 203 TCCSKANICLKCWAFVTMSIKVIDAALRDDFGFQHILWVYSGRRGAHAWVCDKVARNLPD 262
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G S K+V+ PLHP + RS + LRE+F +L+ Q+ FS +
Sbjct: 263 DRRRAIAGYLEVVRGGSQSGKRVNLRRPLHPHITRS-IDTLREYFASTVLVDQDPFSRPD 321
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQKV--QGL 313
+ +++ ++PD+++ + L+ KW RSS+SK W + ++ + + + L
Sbjct: 322 QAARLIELLPDKTLRAALQKKWDSAPGRSSSSK-------WADIDTVAKANSRGLDTKAL 374
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
++IV +TYPRLD EVSK HLLK+PF VHP TGRVC+PID + ++F+P PT
Sbjct: 375 LEAKQDIVLEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDIEKLDDFNPLDTPT 434
Query: 374 LSELLRELNT--------------GDSRMDVD-----------NEWEKTSLGKSIRFFRS 408
L +LL E+N+ DS D ++EKTSL I +FRS
Sbjct: 435 LFQLLDEINSWNPSQANQQDKTPGSDSGSGQDETGTAAKPRKIQDYEKTSLKPYIDYFRS 494
>gi|189054729|dbj|BAG37381.1| unnamed protein product [Homo sapiens]
Length = 420
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 268/421 (63%), Gaps = 36/421 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
C S AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CRSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF +R +++++FEE L++Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-IRKSINIIKKYFEEYALVNQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR-- 315
++KIL+++P E++ EL+ +Q +S NS + RWE LK + ++ +
Sbjct: 240 WDKILALVP-ETIHDELQQSFQ---KSHNSLQ-----RWEHLKKVASRYQNNIKNDKYGP 290
Query: 316 -CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+
Sbjct: 291 WLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTI 350
Query: 375 SELLRELNTGDSRM----------DVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
S + REL+ + DV + +++KTSL ++ F FL+ L KS K E
Sbjct: 351 SFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVF-EHFLENLDKSRKGE 409
Query: 422 M 422
+
Sbjct: 410 L 410
>gi|340724314|ref|XP_003400527.1| PREDICTED: DNA primase small subunit-like [Bombus terrestris]
Length = 415
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 182/405 (44%), Positives = 247/405 (60%), Gaps = 36/405 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
+ L YY RLFP D ++W+SYGN + F REFSFTL DIYLRFQSF S
Sbjct: 8 ADMLPTYYTRLFPFHDYYRWLSYGN--------VNVFTHREFSFTLQGDIYLRFQSFKSA 59
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
ELE IK P KIDIG VY++ P + + G N F PVEREL+FDID+TDYDDVR
Sbjct: 60 KELEYEIKRLLPFKIDIGAVYNLSPKDQ----RKGTN-FHPVERELVFDIDMTDYDDVRT 114
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGAD+C +CW M +A K++D+ALR DFG+ HILWV+SGRRG+HCWVCD AR LT
Sbjct: 115 CCSGADICCKCWKFMALACKILDSALRLDFGYKHILWVFSGRRGIHCWVCDPSARSLTAT 174
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
+RGA+A+Y ++ +G E KKV+ PG ++ E++ F + QN+ T+E
Sbjct: 175 ERGAVAEYLQIVEGGEYMKKKVNLPGDRIHHSIKRALEMIEAVFVPFCIEEQNILGTDEG 234
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQ----LKNTLQSGKQKVQGL 313
EK L +I D+ EL+ + + S+SK+ RW+ +KN +G +K
Sbjct: 235 MEKFLQIISDDEDRQELKAFFGQ---CSSSKD-----RWDSFVKYVKNKKTTGDKKWYQY 286
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
R +EE++ + YPRLD+ VSK NHLLK+PFCVHPKTG++CIP ++F VPT
Sbjct: 287 RHLIEEVMLQYAYPRLDIAVSKGLNHLLKSPFCVHPKTGKICIPFTVNAVDKFQLDKVPT 346
Query: 374 LSELLRELNTGDSRMDVDNE-----------WEKTSLGKSIRFFR 407
L+ L+ E+N D + + E ++KTS+ KS+ F+
Sbjct: 347 LATLIEEINEFDVKDKTEQETYDLNAKRIKDYKKTSINKSLHIFQ 391
>gi|307174599|gb|EFN65021.1| DNA primase small subunit [Camponotus floridanus]
Length = 417
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 182/418 (43%), Positives = 255/418 (61%), Gaps = 29/418 (6%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ L VYY RLFP AD +W+SYGN + F +REFSFTL +DIY+R+QSF+ +
Sbjct: 9 DLLPVYYSRLFPFADYHRWLSYGN--------AATFSKREFSFTLSDDIYIRYQSFHDQK 60
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
L + IK P KIDIG VY+ P + + G N F PVEREL+FDID+TDYD+VR C
Sbjct: 61 GLSDEIKRLLPHKIDIGAVYNAQPKDQ----RRGPN-FQPVERELVFDIDMTDYDEVRTC 115
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C GAD+C +CW M++A K++D+ALR DFG+ HILWV+SGRRG+HCWVCD AR L+ +
Sbjct: 116 CKGADICNKCWKFMSLACKILDSALRLDFGYKHILWVFSGRRGIHCWVCDSAARTLSGQV 175
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R A+A+Y +V G E KKV G ++ +++ F E + QN+ TEE
Sbjct: 176 RAAVAEYLQVIGGGEFMKKKVHLTGDKIHHSIKRALDIIDPIFVEMCVKEQNMLGTEEGI 235
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
EK L ++P+E E++ + N+ S++ F ++ + K T G +K R +E
Sbjct: 236 EKFLPILPNEEDKQEMKALF--NKESTSEARWHAFVQYIESKRT--EGDRKWYLYRHLIE 291
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
E+ ++YPRLD+ VSK NHLLK+PFCVHPKTG++CIP + ++FDP VPT+ L+
Sbjct: 292 EVKLQYSYPRLDINVSKGLNHLLKSPFCVHPKTGKICIPFNANVVDKFDPDKVPTIMTLI 351
Query: 379 RELNTGDSRMDVDNE-----------WEKTSLGKSIRFFRSSFLQPLLKSCKEEMESG 425
E+N D R + E ++KTSL KS+ F+ FL+ L +EE G
Sbjct: 352 EEINAYDVRDKAEEETYELNKKRIKDYKKTSLNKSLHVFQ-EFLRHLEAERREERLKG 408
>gi|345776400|ref|XP_849151.2| PREDICTED: LOW QUALITY PROTEIN: DNA primase small subunit isoform 2
[Canis lupus familiaris]
Length = 418
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/419 (42%), Positives = 265/419 (63%), Gaps = 34/419 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSF+++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFSNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 RDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF+ +S +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPFVSKS-INIIKKYFEEYALVDQDILENKET 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ +L+ +Q++ S RWE LK + S K +
Sbjct: 240 WDKILALVP-ETIHEKLQQNFQKHHNSLQ--------RWECLKKAISSQDIKNDKCGHWL 290
Query: 318 E-EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
E EI+ + +PRLD+ VSK NHLLK+P HPKTGR+ +PID + ++FDP TVPT+S
Sbjct: 291 ELEIMLQYCFPRLDINVSKGINHLLKSPVXCHPKTGRISVPIDLQKVDQFDPFTVPTISS 350
Query: 377 LLRELNT----------GDSRMDVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
+ EL+ ++ D+ + +++KTSL I+ F FL+ L KS K E+
Sbjct: 351 ICHELDAVSTNDEGKEGNEAESDIKHRTRDYKKTSLAPYIKVF-EQFLENLDKSRKGEL 408
>gi|350397738|ref|XP_003484976.1| PREDICTED: DNA primase small subunit-like [Bombus impatiens]
Length = 415
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 182/405 (44%), Positives = 247/405 (60%), Gaps = 36/405 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
+ L YY RLFP D ++W+SYGN + F REFSFTL DIYLRFQSF S
Sbjct: 8 ADLLPTYYTRLFPFHDYYRWLSYGN--------VNVFTHREFSFTLQGDIYLRFQSFKSA 59
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
ELE IK P KIDIG VY++ P + + G N F PVEREL+FDID+TDYDDVR
Sbjct: 60 KELEYEIKRLLPIKIDIGAVYNLSPKDQ----RKGTN-FHPVERELVFDIDMTDYDDVRT 114
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGAD+C +CW M +A K++D+ALR DFG+ HILW++SGRRG+HCWVCD AR LT
Sbjct: 115 CCSGADICYKCWKFMALACKILDSALRLDFGYKHILWIFSGRRGIHCWVCDPSARSLTAI 174
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
+RGA+A+Y ++ +G E KKV+ PG V+ E++ F + QN+ T+E
Sbjct: 175 ERGAVAEYLQIVEGGEYMKKKVNLPGDRIHHSVKRALEMIEAVFVPFCIEEQNILGTDEG 234
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQ----LKNTLQSGKQKVQGL 313
EK L +I D+ EL+ + + S+SK+ RW+ +KN +G +K
Sbjct: 235 MEKFLQIISDDEDRQELKAFFGQ---CSSSKD-----RWDSFVKYVKNKKTTGDKKWYQY 286
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
R +EE++ + YPRLD+ VSK NHLLK+PFCVHPKTG++CIP ++F VPT
Sbjct: 287 RHLIEEVMLQYAYPRLDIAVSKGLNHLLKSPFCVHPKTGKICIPFTVNAVDKFQLDKVPT 346
Query: 374 LSELLRELNTGDSRMDVDNE-----------WEKTSLGKSIRFFR 407
L+ L+ E+N D + + E ++KTS+ KS+ F+
Sbjct: 347 LATLIEEINEFDVKDKTEQETYDLNAKRIKDYKKTSINKSLHIFQ 391
>gi|442757835|gb|JAA71076.1| Putative eukaryotic-type dna primase catalytic small subunit
[Ixodes ricinus]
Length = 420
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/419 (42%), Positives = 262/419 (62%), Gaps = 35/419 (8%)
Query: 1 MLIDGP-KQGNVIPDGFNP----NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFG 55
M + P +QG+ D ++P +YL +YY +LFP + +KW++YG DK+
Sbjct: 1 MALSKPSEQGH---DRYDPKHFSDYLPLYYSKLFPSSTFYKWLTYG------GVDKTMGQ 51
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
RE SFTL++D+YLRFQSF+ + +LE ++++K P KIDIG +Y+ +P H ++
Sbjct: 52 NREISFTLEDDVYLRFQSFSEQKDLEKALRDKNPHKIDIGAIYNHNPKLHH-----HEST 106
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWV 175
FAP E+EL+FDID+TDYD+VR CC GAD+C CW MT+A++++D LR+DFGF+HILWV
Sbjct: 107 FAPREKELVFDIDMTDYDEVRTCCQGADICNNCWLFMTLAMQILDRTLREDFGFEHILWV 166
Query: 176 YSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTE 235
YSGRRGVHCWVCD KAR+L + R AIA+Y V KG +S+KKV+ P +++ +
Sbjct: 167 YSGRRGVHCWVCDAKARKLHSSARSAIANYVSVIKGGXHSSKKVAIFKTXXP-SIKASLK 225
Query: 236 VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
+L++ F L +Q + ++ + +++ PDES E+R S S E R
Sbjct: 226 ILKKSFSTLTLENQRILEDDKFWHGVINNCPDESSKEEMRN----CVLSPTSSEQ----R 277
Query: 296 WEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
W + + ++ K+K + VEE++ YPRLD+ V+K HLLKAPFCVHPKTGRVC
Sbjct: 278 WAEFVDAVERLKRKNLKCQFLVEEVMLELCYPRLDIAVTKGVQHLLKAPFCVHPKTGRVC 337
Query: 356 IPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMD-------VDNEWEKTSLGKSIRFFR 407
+PID + FDPT VPT+ +L E++ D+ V +++KTSL SI F+
Sbjct: 338 VPIDVTNVHAFDPTKVPTVCDLFNEIDAYDANQKESENTSPVMKDYKKTSLAPSISLFQ 396
>gi|223994433|ref|XP_002286900.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978215|gb|EED96541.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 504
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/459 (41%), Positives = 265/459 (57%), Gaps = 55/459 (11%)
Query: 5 GPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSY----------- 53
P +V+ F+P L +YY RLFP+ + W+SY PA S
Sbjct: 44 SPADASVV---FSPELLGMYYARLFPYQLLHSWLSYDQSTVIPANGSSINSAGTPSSSTT 100
Query: 54 FGRREFSFTLD----NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYA 109
F RREFS T++ N++Y+R+QSF S++EL N+I ++ P+KIDIG V++ P +
Sbjct: 101 FPRREFSMTIEPAPGNEVYIRYQSFLSQAELTNAIMKRRPTKIDIGAVFNYPPKDNKSLP 160
Query: 110 QGGDNVFAPVERELIFDIDITDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFG 168
G EREL+FDID+TDYD VR C CSGA +C +CW M +A++V+D L+ DFG
Sbjct: 161 TGK---LQTQERELVFDIDLTDYDGVRNCGCSGAKICPKCWTFMEMAVQVMDEGLKSDFG 217
Query: 169 FDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPF 228
F+H+ W YSGRRGVHCWVCD AR+L+NE R ++A YF V G+E NK PLHP
Sbjct: 218 FEHLAWFYSGRRGVHCWVCDEGARKLSNEARSSVATYFEVNLGSEK-NKNFHLSSPLHPM 276
Query: 229 LVRSYTEVLREFFEEKLLL--SQNLFSTEERYEKILSMIPDES--VTSELRGKWQENRRS 284
L R+Y+ +L F +L L +T + K+L +P + V S+L KW +
Sbjct: 277 LSRAYS-ILEPHFITSVLPEDGHKLLATRADWTKLLLTLPKAANPVASKLEEKWASAKDD 335
Query: 285 SNSKEDINFFRWEQLKNTLQS-----GKQKVQG---------LRRCVEEIVFAFTYPRLD 330
+ +E +WE+LK L + G KV + E VF +TYPRLD
Sbjct: 336 TTPEE-----KWEELKAALMAFIGKGGNAKVPKNLSNTDRIRIEHWPIETVFKYTYPRLD 390
Query: 331 MEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLREL--------N 382
+ VSK +NHLLK+PFCVHPKTGRVC+PI+ ++ FDP TVPTL++L++EL N
Sbjct: 391 INVSKMQNHLLKSPFCVHPKTGRVCVPIEVENVANFDPFTVPTLAQLMKELDEYEEEHKN 450
Query: 383 TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
G+ V+ +W+KTSL K +F+ FL PL+ + E
Sbjct: 451 DGEGASGVEFDWQKTSLKKPFEYFQKKFLTPLMNDVRRE 489
>gi|225714530|gb|ACO13111.1| DNA primase small subunit [Lepeophtheirus salmonis]
Length = 412
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/416 (43%), Positives = 257/416 (61%), Gaps = 33/416 (7%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
PD + ++L +YY RLFP+ +W+ + DK+YF RREFSFTL +DIYLR+Q
Sbjct: 8 PDLLD-DHLPIYYKRLFPYESYCRWLG--------SIDKAYFSRREFSFTLRDDIYLRYQ 58
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY 132
SF++ EL + P KIDIG +++ P+ + VFAP E+E++FDID+TDY
Sbjct: 59 SFSTWEELRTEMCRMTPHKIDIGAIFNARPSDHKKIS-----VFAPQEKEIVFDIDMTDY 113
Query: 133 DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKAR 192
DDVRYCCSGA++C +CW M +A+KV+D ALR DFGF H+LWVYSGRRG+HCWV D A+
Sbjct: 114 DDVRYCCSGAEICPKCWKFMVIAVKVLDEALRQDFGFQHLLWVYSGRRGIHCWVSDPSAK 173
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQNL 251
+L R AIA+Y +V G ++ KKV G +HP + R+ + E FE L+ Q++
Sbjct: 174 KLGQSARSAIAEYLQVLSGGDSRAKKVLIKGKNVHPSIARALN-IASESFESICLVDQDI 232
Query: 252 FSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQ 311
ER+ +LS+IPDE+V ++ K +S S E RW+ +K L+ +
Sbjct: 233 LGEPERWNNVLSLIPDETVREKITSKMPT---ASTSLE-----RWQIIKKCLEQHISTTE 284
Query: 312 GLRR-----CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEF 366
R ++EIV + YPRLD+ V+K NHLLK+PFCVHPKTGR+C+P+DP E+F
Sbjct: 285 PKSRKTSNHILKEIVLQYLYPRLDINVTKGLNHLLKSPFCVHPKTGRICVPLDPNKIEQF 344
Query: 367 DPTTVPTLSELLRELN---TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCK 419
DP VPT+S+L+ E++ + + +++KTSL + F FL L ++ K
Sbjct: 345 DPLKVPTISQLIEEIDRFSKNNENAVISKDYKKTSLRGPMVIF-DEFLSKLSQTWK 399
>gi|348502933|ref|XP_003439021.1| PREDICTED: DNA primase small subunit-like [Oreochromis niloticus]
Length = 426
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/424 (41%), Positives = 261/424 (61%), Gaps = 40/424 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFP + ++W+SYG K+YF REFSFTL +DIY+R+QSF+++
Sbjct: 12 PDLLPLYYRRLFPFSQYYRWLSYG------GVQKNYFQNREFSFTLKDDIYVRYQSFSTQ 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ELE +++ P KID+G VYS P++ + G F +E+EL+FDID+TDYDDVR
Sbjct: 66 NELEKEMQKMNPYKIDVGAVYSHRPSQHNTVKSG---TFQALEKELVFDIDMTDYDDVRS 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI ++D ALRDDFGF H LWVYSGRRGVHCWVCD AR+L+
Sbjct: 123 CCSAADICSKCWTLMTIAIHILDRALRDDFGFQHRLWVYSGRRGVHCWVCDEAARKLSVA 182
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R A+ +Y + KG + + KKV P+HPF+ S +V++E+F + L Q+L ++E
Sbjct: 183 ARSAVTEYLSLVKGGDETVKKVVLTEPIHPFISNS-LDVVKEYFTQYALHDQDLMGSKES 241
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
EK+L+++P+++ R Q+ E RW+ + + + + +
Sbjct: 242 VEKVLALVPEDA-----RSYLQQEFEKEKKPEK----RWKLITTEAKRKQSTAKKGQYFE 292
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
+EI+ + YPRLD VSK NHLLK+PF VHPKTGR+ +PID + ++FDP +VPT+S +
Sbjct: 293 KEIMLQYCYPRLDANVSKGVNHLLKSPFSVHPKTGRISVPIDVSELDKFDPFSVPTISLI 352
Query: 378 LRELN----------TGDSRMDVDN----------EWEKTSLGKSIRFFRSSFLQPLLKS 417
EL+ GD + D ++++TSL K I++F FL + +S
Sbjct: 353 CEELDRPRPGEEKEKLGDGKEKEDEKDAIEKRKIRDYKRTSLAKYIKYF-DQFLDGMARS 411
Query: 418 CKEE 421
K E
Sbjct: 412 WKAE 415
>gi|3676248|emb|CAA09723.1| DNA polymerase alpha subunit IV (primase) [Rattus norvegicus]
Length = 415
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/418 (44%), Positives = 263/418 (62%), Gaps = 39/418 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 12 PELLKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFNNQ 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P++ + G F E+EL+FDID+TDYDDVR
Sbjct: 66 SDLEKEMQKMNPYKIDIGAVYSHRPSQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A+++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 123 CCSSADICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 182
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG + KKV +HPF VR +++++FEE L+ Q++ +E
Sbjct: 183 VRSGIVEYLSLIKGGHDVKKKVHLNEKVHPF-VRKSINIIKKYFEEYALVDQDILENKEN 241
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E+V EL+ +Q S RWE L+ + S Q + +C
Sbjct: 242 WDKILALVP-ETVHDELQKGFQRFHSSPQ--------RWEYLRK-VASAPQNTKN-DKCG 290
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP VPT
Sbjct: 291 PWLEWEIMLQYCFPRLDINVSKGVNHLLKSPFSVHPKTGRISVPIDFQKVDQFDPFVVPT 350
Query: 374 LSELLRELNT------------GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCK 419
+S + REL+ DSR V ++++TSL ++ F FL+ L KS K
Sbjct: 351 ISAICRELDVVSTNEKEKEENETDSRHRV-RDYKRTSLAPYVKVF-EQFLENLDKSRK 406
>gi|390598919|gb|EIN08316.1| prim-pol domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 415
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 247/399 (61%), Gaps = 25/399 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ YY RL+P +F+W+++ ++ F REF+FTL D+Y+R+QSF +
Sbjct: 10 SPEVMRTYYRRLYPFDALFRWLNHAHNP------TKSFTHREFAFTLQGDVYMRYQSFQT 63
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
+L+ P++ +IGPVYS P R G FAP REL+FDID+TDYD +R
Sbjct: 64 AEDLKKQACSLNPTRFEIGPVYSAKPKDRKTAQATGK--FAPERRELVFDIDMTDYDSIR 121
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CCSGA +C CW + A++V+D A+RD FG++H+LWVYSGRRG+H WV D +A LT+
Sbjct: 122 TCCSGAAICARCWKFIAAAVRVLDEAIRDQFGYEHLLWVYSGRRGIHLWVSDKEAIELTD 181
Query: 197 EQRGAIADYFRVYKGNENSNKKVSF---PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFS 253
+QR A+ ++ V G+ +KKV+ PL P L ++ L E F E +L Q+ F
Sbjct: 182 DQRKAVVNWLTVITGSSQQHKKVNVRLGSKPLPPSLQQALP-TLAETFSELILEDQDCFG 240
Query: 254 TEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQS--GKQKV 310
+ + +E +L ++PD+SV +L+ +W N RSS K W K + G +
Sbjct: 241 STQGWEALLMLVPDKSVVEKLQEQWTRNPDRSSGDK-------WSDFKKAINGTKGTPRY 293
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
L+ +E+I+ +TYPRLD EVSKHRNHLLKAPFC+HPKTGRVC+P+DP+ +EF+P
Sbjct: 294 NTLKAAMEDIIIEYTYPRLDAEVSKHRNHLLKAPFCIHPKTGRVCVPVDPEKIDEFEPEK 353
Query: 371 VPTLSELLRELNTG---DSRMDVDNEWEKTSLGKSIRFF 406
VPT+ +LLREL+ G D+ + ++W +TSL + +
Sbjct: 354 VPTVVQLLRELDEGMATDADGETGHDWNRTSLKRYVEMM 392
>gi|194212268|ref|XP_001917724.1| PREDICTED: DNA primase small subunit [Equus caballus]
Length = 420
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 180/422 (42%), Positives = 264/422 (62%), Gaps = 38/422 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVVKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSENVHPF-VRKSISIIKKYFEGYALVGQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ ++L+ +Q++ S RWE LK ++ +C
Sbjct: 240 WDKILALVP-ETMHNDLQQNFQKHHSSLQ--------RWEYLKKAASQCPSNIKN-EKCG 289
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP VPT
Sbjct: 290 PWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFAVPT 349
Query: 374 LSELLRELNT----------GDSRMDVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
+S + EL+ + D+ + +++KTSL ++ F FL+ L KS K
Sbjct: 350 ISSICHELDAIFTSEAEKEENQAESDIKHRTRDYKKTSLAPYVKVF-EQFLENLDKSRKG 408
Query: 421 EM 422
E+
Sbjct: 409 EL 410
>gi|345564438|gb|EGX47401.1| hypothetical protein AOL_s00083g494 [Arthrobotrys oligospora ATCC
24927]
Length = 499
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/415 (43%), Positives = 258/415 (62%), Gaps = 34/415 (8%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P + +Y RLFP +F+W+ N P+ D F REF+FTL ND YLR+Q + +
Sbjct: 80 DPEDMLQFYSRLFPWRQLFRWL---NHSELPSTD---FAHREFAFTLHNDAYLRYQCYPT 133
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVYS P R A+G F P+E+EL+FDID+TDYD++R
Sbjct: 134 FETLRRDVLNLNPSRFEIGPVYSTKPRDR-KQAKGS---FKPIEKELVFDIDLTDYDEIR 189
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CCS +C++CW +T+AIKV+D ALRDDFGF HI+WVYSGRRG H WVCD KAR+L +
Sbjct: 190 TCCSKTKICIKCWQFVTMAIKVVDVALRDDFGFQHIMWVYSGRRGAHAWVCDKKARKLGD 249
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+R AIA YF V KG+ S KKV+ PLHP + RS+ ++L++ F++ +L +Q+ F TE+
Sbjct: 250 GKRRAIAAYFEVVKGSSQSGKKVNLERPLHPHIRRSH-DILKDDFKQNILENQDPFRTEK 308
Query: 257 RYEKILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLR 314
+ E++L ++PD + LR KW R SS+ +DI+ + T+ + L
Sbjct: 309 QAERLLQLLPDRQLKEALREKWDSTIERPSSDKWKDIDALAGSGVSKTIIP-----KVLL 363
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
++I+ +TYPRLD EVSKH NHLLK+PF VHP TG+VC+PID +EFDP VPT+
Sbjct: 364 EHKQDIILEYTYPRLDAEVSKHLNHLLKSPFVVHPGTGKVCVPIDISKLDEFDPDAVPTV 423
Query: 375 SELLRELN------------TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKS 417
+ LL+E++ SR+ ++ +KTSL F S F+Q LL +
Sbjct: 424 TRLLKEIDQWKNPVKEEDDGVSTSRV---SDIDKTSLKPYHDLF-SKFVQKLLNA 474
>gi|169613034|ref|XP_001799934.1| hypothetical protein SNOG_09645 [Phaeosphaeria nodorum SN15]
gi|111061790|gb|EAT82910.1| hypothetical protein SNOG_09645 [Phaeosphaeria nodorum SN15]
Length = 500
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 258/420 (61%), Gaps = 24/420 (5%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ G+ P+ F REF+FTL ND Y+R+QSF +
Sbjct: 94 DPEVMRAFYQRLFPFRPLFQWLN-GSPIPTPS-----FAHREFAFTLPNDSYIRYQSFPT 147
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGP YS +P R + + F P+ +EL+FDID+TDYDD+R
Sbjct: 148 ADLLRKQCIQLLPSRFEIGPQYSTNPRDRKTVRKA--SAFRPIMKELVFDIDMTDYDDIR 205
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC G +C +CW +T+A+KVID ALR+DFG+ HILWVYSGRRG H WVCD +AR L +
Sbjct: 206 TCCGGTSICHKCWGFITMAVKVIDVALREDFGYKHILWVYSGRRGAHAWVCDKRARELDD 265
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+ R +IA Y + KG +NS KKV+ PLHP + RS +L+E F+ +L Q+ ++T+E
Sbjct: 266 QSRKSIAGYLELLKGGDNSGKKVNLRRPLHPHIERSLA-ILKEHFQAAILADQDPWATDE 324
Query: 257 RYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSG--KQKVQGL 313
+ +L+++PD + + L+ KW + +R S SK W + +SG + + L
Sbjct: 325 KAAHLLNLLPDTQLRAALQKKWDSSPQRPSASK-------WADIDALAKSGALSKSPREL 377
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
+ ++IV +TYPRLD VSK NHLLK+PF VHP TGRVC+PID + EEFDP +VPT
Sbjct: 378 QEAKQDIVLEYTYPRLDANVSKKLNHLLKSPFVVHPGTGRVCVPIDTRRVEEFDPLSVPT 437
Query: 374 LSELLRELNTGDSRMDVD--NEWEKTSLGKSIRFFR---SSFLQPLLKSCKEEMESGYKA 428
+++LL E++ + +WEKTSL + +FR S ++ K E E G A
Sbjct: 438 VTQLLTEIDEWEGEEGEKKMQDWEKTSLKPYVDYFRRFVSGLMEEEKPGVKREREEGADA 497
>gi|302915415|ref|XP_003051518.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732457|gb|EEU45805.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 493
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 190/430 (44%), Positives = 262/430 (60%), Gaps = 31/430 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 84 DPEVMRSFYQRLFPWRYLFQWLN------HSPTPTNDFGNREFAFTLSNDAYLRYQSFPT 137
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P R + F P+ +EL FDID+TDYDDVR
Sbjct: 138 ADMLRKDVLRLMPSRFEIGPVYTTNPRDRKTLVKSSG--FKPLAKELCFDIDLTDYDDVR 195
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW MT+AIKV+D ALR+DFGF HI+WVYSGRRG H WVCD K R + +
Sbjct: 196 TCCDKANICNKCWQFMTMAIKVLDAALREDFGFKHIMWVYSGRRGAHAWVCDKKVRSMDD 255
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V KG S KKV+ PLHP L RS E+L+ F+E +L Q+ +S+ E
Sbjct: 256 QKRRAIAGYLEVVKGGAQSGKKVNVRRPLHPHLARSL-EILKTHFQEDVLDVQDPWSSPE 314
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR 315
+ EK+L ++P++++ LR KW R+S SK W + +SG K R+
Sbjct: 315 QAEKLLQLLPNQNLNESLRRKWDAAPGRASASK-------WADIDAVAKSGASKNLDARQ 367
Query: 316 CVE---EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
+E +IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PI+ K+ E+FDP VP
Sbjct: 368 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPINTKNLEDFDPLGVP 427
Query: 373 TLSELLRELNTGDSRMDVD-----NEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYK 427
T+ LL E++ D + +WEKTSL I FR F+ L+K E K
Sbjct: 428 TVQGLLAEIDAWKGEEDEEANKSTADWEKTSLKPYIEQFR-HFVNGLMKD-----EKDVK 481
Query: 428 AKIQQTKNSL 437
K ++ +NS+
Sbjct: 482 VKREREENSM 491
>gi|344266233|ref|XP_003405185.1| PREDICTED: DNA primase small subunit [Loxodonta africana]
Length = 417
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 178/409 (43%), Positives = 259/409 (63%), Gaps = 24/409 (5%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKIYYRRLFPYAQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ P KIDIG VYS P++ G F E+EL+FDID+TDYDDVR
Sbjct: 64 SELEKEMQKMNPYKIDIGAVYSHRPSQHSTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A+++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG + KKV +HPF+ RS ++R +FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGPDIKKKVHLSEKIHPFVRRSINIIIR-YFEEYALVGQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR-- 315
++KIL+++P E++ +L+ +Q+ S RWE K + V+ R
Sbjct: 240 WDKILALVP-ETMHDDLQQGFQKYHSSLQ--------RWEYFKKVAGRYQSNVKNDRYGP 290
Query: 316 -CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP VPT+
Sbjct: 291 WLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFAVPTI 350
Query: 375 SELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEME 423
S + EL+ + + +NE E + + + R ++ + L P +K +E +E
Sbjct: 351 SSICHELDIISTNEE-ENEAE-SDVKRRTRDYKKTGLAPYVKVFEEFLE 397
>gi|348580914|ref|XP_003476223.1| PREDICTED: DNA primase small subunit isoform 2 [Cavia porcellus]
Length = 419
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 191/422 (45%), Positives = 268/422 (63%), Gaps = 39/422 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYPQYYRWLNYG------GVVKNYFQNREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + +A G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNAVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI +ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIHIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF+ RS +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPFVRRS-IHIIKKYFEEYALVDQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLK---NTLQSGKQKVQGLR 314
++KIL+++P ++ EL+ +Q +S NS + RWE LK NT Q+ K G
Sbjct: 240 WDKILALVPG-TIHEELQTCFQ---KSHNSVQ-----RWEHLKRVINTCQNIKNDKCG-- 288
Query: 315 RCVE-EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
+E EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + + FDP TVPT
Sbjct: 289 PWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDLFDPFTVPT 348
Query: 374 LSELLRELNTGDSRM----------DVDN---EWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
+S L ELN + D+ + + +KTSL ++ F FL+ L KS K
Sbjct: 349 VSSLCCELNVISTNEKEKEENETESDIKHRTRDHKKTSLAPYVKVF-EQFLENLDKSRKG 407
Query: 421 EM 422
E+
Sbjct: 408 EL 409
>gi|119617365|gb|EAW96959.1| hCG2016482, isoform CRA_a [Homo sapiens]
Length = 428
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/429 (42%), Positives = 268/429 (62%), Gaps = 44/429 (10%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRD--------DFGFDHILWVYSGRRGVHCWVCDG 189
CCS AD+C +CW LMT+AI++ID AL+ DFGF H LWVYSGRRGVHCWVCD
Sbjct: 121 CCSSADICPKCWTLMTMAIRIIDRALKGKYQQFLNGDFGFKHRLWVYSGRRGVHCWVCDE 180
Query: 190 KARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQ 249
R+L++ R I +Y + KG ++ KKV +HPF +R +++++FEE L++Q
Sbjct: 181 SVRKLSSAVRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-IRKSINIIKKYFEEYALVNQ 239
Query: 250 NLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQK 309
++ +E ++KIL+++P E++ EL+ +Q +S NS + RWE LK +
Sbjct: 240 DILENKESWDKILALVP-ETIHDELQQSFQ---KSHNSLQ-----RWEHLKKVASRYQNN 290
Query: 310 VQGLRR---CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEF 366
++ + EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++F
Sbjct: 291 IKNDKYGPWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQF 350
Query: 367 DPTTVPTLSELLRELNTGDSRM----------DVDN---EWEKTSLGKSIRFFRSSFLQP 413
DP TVPT+S + REL+ + DV + +++KTSL ++ F FL+
Sbjct: 351 DPFTVPTISFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVF-EHFLEN 409
Query: 414 LLKSCKEEM 422
L KS K E+
Sbjct: 410 LDKSRKGEL 418
>gi|350584151|ref|XP_003355516.2| PREDICTED: DNA primase small subunit-like [Sus scrofa]
Length = 511
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/370 (47%), Positives = 242/370 (65%), Gaps = 24/370 (6%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVVKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SELEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI +ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIHIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FEE L+ QN+ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLNEKIHPF-VRKSINIIKKYFEEYALVGQNILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ EL+ +Q+++ S RWE LK S Q +C
Sbjct: 240 WDKILALVP-ETMHDELQQSFQKHQNSLQ--------RWEYLKKA-ASRYQNNSKNDKCG 289
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT
Sbjct: 290 PWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPT 349
Query: 374 LSELLRELNT 383
+S + EL+
Sbjct: 350 ISSICHELDA 359
>gi|134083112|emb|CAK46785.1| unnamed protein product [Aspergillus niger]
Length = 512
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 259/424 (61%), Gaps = 44/424 (10%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+QS+ +
Sbjct: 84 DTMLAFYQRLFPFRYLFQWL---NHGIVPSPD---FGNREFALTLQNDAYLRYQSYATAD 137
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
I + PS+ +IGPVY+ +P R +GG P+ +EL+FDID+TDYDD+R C
Sbjct: 138 LFRKDILKMNPSRFEIGPVYNTNPRDRKTL-RGGQ--MKPIAKELVFDIDLTDYDDIRSC 194
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C A++C +CW +T+A+KV+DTALR+DFGF+HILWVYSGRRG H WVCD +AR L +++
Sbjct: 195 CEKANICSKCWAFVTMAMKVVDTALREDFGFEHILWVYSGRRGAHAWVCDPRARNLPDDR 254
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R AIA Y V +G +S K+V PLHP + RS E+L+ +F + L+ Q F +E+
Sbjct: 255 RRAIAGYLDVIRGGNSSGKRV-LKRPLHPHMSRSL-EILKPYFAQTTLVDQETFGSEQ-A 311
Query: 259 EKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
+++LS++PD+ + LR +W+ +R S+N DI + L T +S LR
Sbjct: 312 QRLLSLLPDKGLNESLRKRWESSPDRSSANKWADI-----DALAKTGKSSTLNPTTLRDA 366
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PID + E+FDP +VPT+SE
Sbjct: 367 KQDIVLEYTYPRLDSEVSKKMIHLLKSPFVIHPGTGRVCVPIDARKAEQFDPLSVPTVSE 426
Query: 377 LLRELNTGDSRMDVDN------------------------EWEKTSLGKSIRFFRSSFLQ 412
LL E++ D+ N ++EKTSL + +FR SF+
Sbjct: 427 LLAEIDAWDAEHPSTNAGPEVADGEGSVPDSDARGSRRLQDYEKTSLKPYVDYFR-SFIA 485
Query: 413 PLLK 416
LLK
Sbjct: 486 GLLK 489
>gi|440899485|gb|ELR50782.1| DNA primase small subunit, partial [Bos grunniens mutus]
Length = 414
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 267/421 (63%), Gaps = 36/421 (8%)
Query: 18 PNYLKVYY-GRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
P LK+YY + ++W++YG K+YF REFSFTL +DIY+R+QSFN+
Sbjct: 10 PELLKLYYRXXXXXYGQYYRWLNYG------GVVKNYFQHREFSFTLKDDIYIRYQSFNN 63
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
+S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 QSDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVR 120
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CCS AD+C +CW LMT+AI +ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 RCCSSADICSKCWTLMTMAIHIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSS 180
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
R I +Y + KG ++ KKV +HPF VR +++++FE+ L+ Q++ ++
Sbjct: 181 AVRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-VRKSINIIKKYFEQYALVDQDILENKQ 239
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
++KIL+++P+ + EL+ +Q R SNS + RWE LKNT+ + QK +C
Sbjct: 240 SWDKILALVPENILRDELQQGFQ---RQSNSPQ-----RWETLKNTI-NKYQKNNKNDKC 290
Query: 317 ---VE-EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
+E EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVP
Sbjct: 291 GLWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVP 350
Query: 373 TLSELLRELNTGDSRMDVDN-----------EWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
T+S + EL+ ++ + +N ++++TSL ++ F FL+ L KS K E
Sbjct: 351 TISSICHELDVISTKEEEENGTESDTKHRTRDYKRTSLAPFVKVF-EQFLENLDKSRKGE 409
Query: 422 M 422
+
Sbjct: 410 L 410
>gi|332021893|gb|EGI62229.1| DNA primase small subunit [Acromyrmex echinatior]
Length = 447
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/418 (43%), Positives = 254/418 (60%), Gaps = 29/418 (6%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ L VYY RLFP AD +W+SYGN F +REFSFTL NDIY+R+QSFN +
Sbjct: 9 DLLPVYYSRLFPFADYHRWLSYGN--------AVTFSKREFSFTLSNDIYIRYQSFNDQK 60
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
L + IK P KIDIG VY+V P + + G N F PVEREL+FDID+TDYD+VR C
Sbjct: 61 GLSDEIKRMLPHKIDIGAVYNVQPKDQ----RRGPN-FQPVERELVFDIDMTDYDEVRTC 115
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C GAD+C +CW M++A K++D+ALR DFG+ H+LW++SGRRG+HCWVCD AR L+ +
Sbjct: 116 CKGADICGKCWKFMSLACKILDSALRLDFGYKHLLWIFSGRRGIHCWVCDPAARSLSGQV 175
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R A+A+Y ++ G E KKV G V+ +++ F E + QN+ TEE
Sbjct: 176 RAAVAEYLQIIGGGEFMKKKVHLTGDKIHHSVKRALDIIDPVFVEMCVKEQNMLGTEEGI 235
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
EK L ++P++ E++ + ++ S++ F ++ K T G +K R +E
Sbjct: 236 EKFLPILPNDEDRQEIKVLF--DKESTSEARWNTFLQYIVSKRT--GGDRKWYLYRHLIE 291
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
EI ++YPRLD+ VSK NHLLK+PFCVHPKTG++CIP + ++FDP VPT+ L+
Sbjct: 292 EIKLQYSYPRLDINVSKGLNHLLKSPFCVHPKTGKICIPFNASAVDKFDPDKVPTIMTLI 351
Query: 379 RELNTGDSRMDVDNE-----------WEKTSLGKSIRFFRSSFLQPLLKSCKEEMESG 425
E+N D + + E ++KTSL KS+ F+ FL+ L +E+ G
Sbjct: 352 EEINAYDVKDKTEEETYELNKKRIKDYKKTSLNKSLHVFQ-EFLRHLEADRREQRLKG 408
>gi|348580912|ref|XP_003476222.1| PREDICTED: DNA primase small subunit isoform 1 [Cavia porcellus]
Length = 432
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 187/435 (42%), Positives = 267/435 (61%), Gaps = 52/435 (11%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYPQYYRWLNYG------GVVKNYFQNREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + +A G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNAVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI +ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIHIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF+ RS +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPFVRRS-IHIIKKYFEEYALVDQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P ++ EL+ +Q +S NS + RWE LK + + +V + C+
Sbjct: 240 WDKILALVPG-TIHEELQTCFQ---KSHNSVQ-----RWEHLKRVINTC--QVYSIEICI 288
Query: 318 -----------------EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP 360
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID
Sbjct: 289 FKYANNIKNDKCGPWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDL 348
Query: 361 KDCEEFDPTTVPTLSELLRELNTGDSRM----------DVDN---EWEKTSLGKSIRFFR 407
+ + FDP TVPT+S L ELN + D+ + + +KTSL ++ F
Sbjct: 349 QKVDLFDPFTVPTVSSLCCELNVISTNEKEKEENETESDIKHRTRDHKKTSLAPYVKVF- 407
Query: 408 SSFLQPLLKSCKEEM 422
FL+ L KS K E+
Sbjct: 408 EQFLENLDKSRKGEL 422
>gi|134111825|ref|XP_775448.1| hypothetical protein CNBE1630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258107|gb|EAL20801.1| hypothetical protein CNBE1630 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 429
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/410 (41%), Positives = 250/410 (60%), Gaps = 36/410 (8%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
D +P ++++Y RLFP+ ++ W+ N + P+ F REF+FTL D+YLR+QS
Sbjct: 14 DASSPQVMQLFYRRLFPYRPLYLWL---NQEQIPS---KLFTHREFAFTLAGDVYLRYQS 67
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
FN+ E + SI PS+ +IGP YS P R A G P REL+FDID+TDYD
Sbjct: 68 FNNVDEFKASIARHIPSRFEIGPQYSARPKDRKTLASGA---LQPQRRELVFDIDMTDYD 124
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
++R CC+ +C CW + A+KV+D +LR+ FGF H+LWVYSGRRG+HCW+ D A
Sbjct: 125 EIRTCCTDKTICKRCWGFIAAAVKVLDHSLRETFGFKHLLWVYSGRRGIHCWISDQSALD 184
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGP-----LHPFLVRSYTEVLREFFEEKLLLS 248
LT++QR A+ + V KG + +KKV+ GP LHPFL + + L+ F +
Sbjct: 185 LTDDQRRALVTFLEVIKGGKEQSKKVNVRGPTGDAALHPFLSEAL-DTLKPLFSSLCIYD 243
Query: 249 QNLFSTEERYEKILSMIP-DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
Q+ F E+ +E +L+++P D +V LR KW++N SS+ + +W +L + + K
Sbjct: 244 QDCFKGEKGWEALLAILPTDRAVIGPLRAKWEKNSDSSSEE------KWRELMSEIAKHK 297
Query: 308 QK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
++ + + VE++V +TYPR+D EVSKHRNHLLK+PFCVHP TGRVC+PI+P +
Sbjct: 298 KEEAIMTKFTKAVEDVVLQYTYPRIDAEVSKHRNHLLKSPFCVHPGTGRVCVPINPSLID 357
Query: 365 EFDPTTVPTLSELLRELN--------TGDSRMDVDNEWEKTSLGKSIRFF 406
EFDP TVPT+ +LL EL+ RM+ ++E TSLG + F
Sbjct: 358 EFDPDTVPTVGQLLNELDNVKAEDPEAAGRRME---DYEHTSLGPYVEMF 404
>gi|405120676|gb|AFR95446.1| DNA primase small subunit [Cryptococcus neoformans var. grubii H99]
Length = 429
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/410 (41%), Positives = 250/410 (60%), Gaps = 36/410 (8%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
D +P ++++Y RLFP+ ++ W+ N + P+ F REF+FTL D+YLR+QS
Sbjct: 14 DASSPQVMQLFYRRLFPYRPLYLWL---NQEQIPS---KLFTHREFAFTLAGDVYLRYQS 67
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
FN+ E + SI PS+ +IGP YS P R A G P REL+FDID+TDYD
Sbjct: 68 FNNVDEFKVSIARHIPSRFEIGPQYSARPKDRKTLASGA---LQPQRRELVFDIDMTDYD 124
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
++R CC+ +C CW + A+KV+D +LR+ FGF H+LWVYSGRRG+HCW+ D A
Sbjct: 125 EIRTCCTDKTICRRCWGFIAAAVKVLDHSLRETFGFKHLLWVYSGRRGIHCWISDQSALD 184
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGP-----LHPFLVRSYTEVLREFFEEKLLLS 248
LT++QR A+ + V KG + NKKV+ GP LHPFL + + L+ F +
Sbjct: 185 LTDDQRRALVTFLEVIKGGKEQNKKVNVRGPTGDAALHPFLSEAL-DTLKPLFSSLCIYD 243
Query: 249 QNLFSTEERYEKILSMIP-DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
Q+ F E+ +E +L+++P D +V LR KW++N SS+ + +W +L + + K
Sbjct: 244 QDCFKGEKGWEALLAILPTDRTVIGPLRAKWEKNPDSSSDE------KWRELMSEIAKHK 297
Query: 308 QK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
++ + + +E++V +TYPR+D EVSKHRNHLLK+PFCVHP TGRVC+PI+P +
Sbjct: 298 KEEATMTKFTKAIEDVVLQYTYPRIDAEVSKHRNHLLKSPFCVHPGTGRVCVPINPSLID 357
Query: 365 EFDPTTVPTLSELLRELN--------TGDSRMDVDNEWEKTSLGKSIRFF 406
EFDP TVPT+ +LL EL+ RM+ ++E TSLG + F
Sbjct: 358 EFDPDTVPTVGQLLNELDNVKPEDPEAAGRRME---DYEHTSLGPYVEMF 404
>gi|46123923|ref|XP_386515.1| hypothetical protein FG06339.1 [Gibberella zeae PH-1]
Length = 498
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 255/412 (61%), Gaps = 25/412 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 90 DPEVMRSFYQRLFPWRYLFQWLN------HSPTPTNDFGNREFAFTLQNDAYLRYQSFPT 143
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 144 ADTLRKDVLRLMPSRFEIGPVYTTNPRDRKTLRNS--SAFKPLAKELCFDIDLTDYDDIR 201
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW MT+AIKV+D ALR+DFGF HI+WVYSGRRG H WVCD K R + +
Sbjct: 202 TCCDKANICNKCWQFMTMAIKVVDVALREDFGFKHIMWVYSGRRGAHAWVCDKKVRSMDD 261
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V KG S KKV+ PLHP L RS E+L+ F+E +L Q+ +++ E
Sbjct: 262 QKRRAIAGYLEVVKGGAQSGKKVNVRRPLHPHLARSL-EILKTHFQEDVLEVQDPWASPE 320
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR 315
+ EK+L ++P++++ LR KW R S SK W + +SG K R+
Sbjct: 321 QSEKLLQLLPNQNLNESLRRKWDAAPGRPSTSK-------WADIDAVAKSGASKNLDARQ 373
Query: 316 CVE---EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
+E +IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PI+ K+ E+FDP VP
Sbjct: 374 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPINTKNLEDFDPLGVP 433
Query: 373 TLSELLRELNTGDSRMDVDN----EWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
T+ LL E+++ S + +WEKTSL I FR F+ L+K K+
Sbjct: 434 TVQGLLAEIDSWKSEGEEGGKGIADWEKTSLRPYIEQFR-HFVNGLMKDEKD 484
>gi|58268142|ref|XP_571227.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227461|gb|AAW43920.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 429
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/410 (41%), Positives = 250/410 (60%), Gaps = 36/410 (8%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
D +P ++++Y RLFP+ ++ W+ N + P+ F REF+FTL D+YLR+QS
Sbjct: 14 DASSPQVMQLFYRRLFPYRPLYLWL---NQEQIPS---KLFTHREFAFTLAGDVYLRYQS 67
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
FN+ E + SI PS+ +IGP YS P R A G P REL+FDID+TDYD
Sbjct: 68 FNNVDEFKASIARHIPSRFEIGPQYSARPKDRKTLASGA---LQPQRRELVFDIDMTDYD 124
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
++R CC+ +C CW + A+KV+D +LR+ FGF H+LWVYSGRRG+HCW+ D A
Sbjct: 125 EIRTCCTDKTICKRCWGFIAAAVKVLDHSLRETFGFKHLLWVYSGRRGIHCWISDQSALD 184
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGP-----LHPFLVRSYTEVLREFFEEKLLLS 248
LT++QR A+ + V KG + +KKV+ GP LHPFL + + L+ F +
Sbjct: 185 LTDDQRRALVTFLEVIKGGKEQSKKVNVRGPTGDAALHPFLSEAL-DTLKPLFSSLCIYD 243
Query: 249 QNLFSTEERYEKILSMIP-DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
Q+ F E+ +E +L+++P D +V LR KW++N SS+ + +W +L + + K
Sbjct: 244 QDCFKGEKGWEALLAILPTDRTVIGPLRAKWEKNSDSSSEE------KWRELMSEIAKHK 297
Query: 308 QK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
++ + + VE++V +TYPR+D EVSKHRNHLLK+PFCVHP TGRVC+PI+P +
Sbjct: 298 KEEAIMTKFTKAVEDVVLQYTYPRIDAEVSKHRNHLLKSPFCVHPGTGRVCVPINPSLID 357
Query: 365 EFDPTTVPTLSELLRELN--------TGDSRMDVDNEWEKTSLGKSIRFF 406
EFDP TVPT+ +LL EL+ RM+ ++E TSLG + F
Sbjct: 358 EFDPDTVPTVGQLLNELDNVKAEDSEAAGRRME---DYEHTSLGPYVEMF 404
>gi|302658042|ref|XP_003020731.1| hypothetical protein TRV_05182 [Trichophyton verrucosum HKI 0517]
gi|291184589|gb|EFE40113.1| hypothetical protein TRV_05182 [Trichophyton verrucosum HKI 0517]
Length = 539
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 179/438 (40%), Positives = 256/438 (58%), Gaps = 62/438 (14%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W+ N G P+ D FG REF+FTL ND YLR+QSF +
Sbjct: 92 DPEFMSAFYQRLFPFKYLFQWL---NHGVKPSTD---FGNREFAFTLPNDAYLRYQSFQT 145
Query: 77 ES------------------ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAP 118
L + PS+ +IGPVYS +P R + G F P
Sbjct: 146 ADAYVYTFLPQSGFKLISFHSLHKDVMRLNPSRFEIGPVYSTNPRDRKTLRKPG--AFKP 203
Query: 119 VERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSG 178
+ +EL+FDID+TDYDD+R CCS A++CL+CW +T++IKVID ALR+DFGF HILWVYSG
Sbjct: 204 ISKELVFDIDLTDYDDIRTCCSKANICLKCWAFVTMSIKVIDAALREDFGFQHILWVYSG 263
Query: 179 RRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
RRG H WVCD +AR L +++R AIA+Y V +G S K+V+ PLHP + RS + LR
Sbjct: 264 RRGAHAWVCDKRARNLPDDRRRAIAEYLEVVRGGSQSGKRVNLRRPLHPHITRSL-DTLR 322
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWE 297
E+F +L+ Q+ FS ++ +++ ++PD+++ + L+ KW RSS+SK W
Sbjct: 323 EYFASTVLVDQDPFSRPDQAARLIELLPDKTLRAALQKKWDSAPGRSSSSK-------WA 375
Query: 298 QLKNTLQSGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
+ ++ + + + L ++IV +TYPRLD EVSK HLLK+PF VHP TGRVC
Sbjct: 376 DIDTVAKANSRGLDTKALLEAKQDIVLEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVC 435
Query: 356 IPIDPKDCEEFDPTTVPTLSELLRELN-----------------TGDSRMDVDN------ 392
+PID + ++F+P PTL +LL E+N +G + D
Sbjct: 436 VPIDIRKVDDFNPLDTPTLFQLLDEINSWNPSQANQRDQMPGSDSGSGHDETDTAAKPRR 495
Query: 393 --EWEKTSLGKSIRFFRS 408
++EKTSL I +FRS
Sbjct: 496 IQDYEKTSLKPYIDYFRS 513
>gi|115384780|ref|XP_001208937.1| DNA primase small subunit [Aspergillus terreus NIH2624]
gi|114196629|gb|EAU38329.1| DNA primase small subunit [Aspergillus terreus NIH2624]
Length = 517
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/421 (42%), Positives = 255/421 (60%), Gaps = 45/421 (10%)
Query: 23 VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELEN 82
+Y RLFP +F+W+ N G P+ D FG REF+ TL N+ YLR+QS+ +
Sbjct: 92 AFYQRLFPFRYLFQWL---NHGIVPSPD---FGNREFALTLQNEAYLRYQSYATADLFRK 145
Query: 83 SIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGA 142
I P++ +IGPVY+ +P R +GG PV +EL+FDID+TDYDD+R CC A
Sbjct: 146 DILRMNPARFEIGPVYNTNPRDRKTL-RGGQ--LKPVSKELVFDIDLTDYDDIRTCCEKA 202
Query: 143 DVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAI 202
++C +CW +T+AIKV+D ALR+DFGF HILWVYSGRRG H WVCD +AR L +++R AI
Sbjct: 203 NICEKCWVFITMAIKVVDKALREDFGFQHILWVYSGRRGAHAWVCDPRARSLPDDRRRAI 262
Query: 203 ADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKIL 262
A Y + +G S K+V+ PLHP + RS ++L+ +F + L + F+ E+ +++L
Sbjct: 263 AGYLDLIRGGTQSGKRVNLKRPLHPHMARSL-DILKPYFAQTTLGDLDTFAGPEQTQRLL 321
Query: 263 SMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQ---KVQGLRRCVE 318
S++PD+++ LR KW+ + R S SK W + +SGK L +
Sbjct: 322 SLLPDKTLNEALRKKWESSPERPSTSK-------WADIDALAKSGKSTTLNTSTLLDAKQ 374
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
+IV +TYPRLD EVSK NHLLK+PF VHP TGRVC+PID + E+FDP +VPT+++LL
Sbjct: 375 DIVLEYTYPRLDSEVSKKLNHLLKSPFVVHPSTGRVCVPIDARKAEQFDPFSVPTVTQLL 434
Query: 379 REL--------NTGDSRMDVD---------------NEWEKTSLGKSIRFFRSSFLQPLL 415
E+ NTG +V+ ++EKTSL + +FR SF+ LL
Sbjct: 435 SEIDAWDADHPNTGGETTEVEGSAPNDSDARGSRKLQDYEKTSLKPYVDYFR-SFVAGLL 493
Query: 416 K 416
K
Sbjct: 494 K 494
>gi|327357897|gb|EGE86754.1| DNA primase [Ajellomyces dermatitidis ATCC 18188]
Length = 564
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 188/466 (40%), Positives = 262/466 (56%), Gaps = 62/466 (13%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFN 75
+ + + +Y RLFP F+W+ N G P+ D FG REFSFTL N+ LR+QSF
Sbjct: 96 IDSDIMHAFYLRLFPFRYFFQWL---NHGVKPSPD---FGNREFSFTLQNNAVLRYQSFP 149
Query: 76 SESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDV 135
+ L I P++ +IGP+YS +P R + + + F PV +EL+FDID+TDYDD+
Sbjct: 150 TAELLRKEILHLKPTRFEIGPIYSTNPRDRKSLRKA--SRFRPVSKELVFDIDLTDYDDI 207
Query: 136 RYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
R CC+ A++C +CW T+AIKV+D ALR+DFGF+HILWVYSGRRG H WVCD +AR L
Sbjct: 208 RTCCTKANICQKCWSFATMAIKVVDAALREDFGFEHILWVYSGRRGAHAWVCDRRARDLP 267
Query: 196 NEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE 255
+++R AI Y +G S KKV+ PLHP + RS E+L+ +F +L+ Q+ FS
Sbjct: 268 DDRRKAITGYLEAIRGGSQSGKKVNLKRPLHPHIARSL-EILKPYFASTILVEQDTFSKP 326
Query: 256 ERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFF------RWEQLKNTLQSGK 307
E+ E++LS++PD+ + LR KW +R S N DI+ R EQ + G
Sbjct: 327 EQAEQLLSLLPDKPLADALRRKWDSAPDRSSVNKWNDIDALAKSTKSRAEQQDGKGRGGA 386
Query: 308 QK------VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK 361
+ L ++I +TYPRLD EV K HLLK+PF VHP TGRVC+PID +
Sbjct: 387 SSSNRPIDTKALLEAKQDIALEYTYPRLDAEVGKKLIHLLKSPFVVHPGTGRVCVPIDIR 446
Query: 362 DCEEFDPTTVPTLSELLRELNT---GD-----------------------------SRMD 389
E+FDP VPT+ EL+ E+N GD S D
Sbjct: 447 RVEQFDPLRVPTVGELIAEINAWEGGDELRDDDANDVNSNGAAVKDEQMVGDVLPSSTAD 506
Query: 390 VDN------EWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAK 429
+D ++EKTSL I +FR SF+ LLK+ + + G + +
Sbjct: 507 IDGRGRKVQDYEKTSLKPYIDYFR-SFVAGLLKAERTGVGMGKRGR 551
>gi|302498517|ref|XP_003011256.1| hypothetical protein ARB_02538 [Arthroderma benhamiae CBS 112371]
gi|291174805|gb|EFE30616.1| hypothetical protein ARB_02538 [Arthroderma benhamiae CBS 112371]
Length = 539
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/439 (40%), Positives = 255/439 (58%), Gaps = 64/439 (14%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W+ N G P+ D FG REF+FTL ND YLR+QSF +
Sbjct: 92 DPEFMSAFYQRLFPFKYLFQWL---NHGVKPSTD---FGNREFAFTLPNDAYLRYQSFQT 145
Query: 77 ES------------------ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAP 118
L + PS+ +IGPVYS +P R + G F P
Sbjct: 146 ADAYVYTFLPQSGFKLTSLHSLHKDVMRLNPSRFEIGPVYSTNPRDRKTLRKPG--AFKP 203
Query: 119 VERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSG 178
+ +EL+FDID+TDYDD+R CCS A++CL+CW +T++IKVID ALR+DFGF HILWVYSG
Sbjct: 204 ISKELVFDIDLTDYDDIRTCCSKANICLKCWAFVTMSIKVIDAALREDFGFQHILWVYSG 263
Query: 179 RRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
RRG H WVCD +AR L +++R AIA Y V +G S K+V+ PLHP + RS + LR
Sbjct: 264 RRGAHAWVCDKRARNLPDDRRRAIAGYLEVVRGGSQSGKRVNLRRPLHPHITRSL-DTLR 322
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRW 296
E+F +L+ Q+ FS ++ +++ ++PD+++ + L+ KW R SSN +W
Sbjct: 323 EYFASTVLVDQDPFSRPDQAARLIELLPDKTLRAALQKKWDSAPGRSSSN--------KW 374
Query: 297 EQLKNTLQSGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
+ ++ + + + L ++IV +TYPRLD EVSK HLLK+PF VHP TGRV
Sbjct: 375 ADIDTVAKANSRGLDTKALLEAKQDIVLEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRV 434
Query: 355 CIPIDPKDCEEFDPTTVPTLSELLRELN-----------------TGDSRMDVDN----- 392
C+PID + ++F+P PTL +LL E+N +G + + D
Sbjct: 435 CVPIDIRKVDDFNPLDTPTLFQLLDEINSWNPSQASQRDQMPGSDSGSGQDETDTAAKPR 494
Query: 393 ---EWEKTSLGKSIRFFRS 408
++EKTSL I +FRS
Sbjct: 495 KIQDYEKTSLKPYIDYFRS 513
>gi|403413528|emb|CCM00228.1| predicted protein [Fibroporia radiculosa]
Length = 421
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 247/405 (60%), Gaps = 19/405 (4%)
Query: 12 IPDG--FNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYL 69
I DG P + V+Y RL+P+ ++ W++ H F +REF+FTL D+YL
Sbjct: 3 IADGEPVTPELMLVFYQRLYPYKSVYGWLN------HDHKPTRLFTQREFAFTLPGDVYL 56
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R+QSF EL+ I + PS+ +IGPVYS P R G F P+ REL+FDID+
Sbjct: 57 RYQSFEDADELKRQIVKLNPSRFEIGPVYSARPRDRKTVRPGK---FVPLLRELVFDIDM 113
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
TDYD +R CC+GAD+C CW + A++V+D ALRD FG+ +LWVYSGRRG+H W+ D
Sbjct: 114 TDYDPIRTCCAGADICRRCWAFIAAAVRVLDAALRDQFGYQRLLWVYSGRRGIHLWISDT 173
Query: 190 KARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLH--PFLVRSYTEVLREFFEEKLLL 247
+A LT+EQR A+ + V +G ++ KKV+ P +RS + L F + +L
Sbjct: 174 EAMELTDEQRKALVGWLTVIQGGKDMRKKVNVRQGTRALPPSIRSARDALVSVFSDTVLA 233
Query: 248 SQNLFSTEERYEKILSMIPDESVTSELRGKW-QENRRSSNSKEDINFFRWEQLKNTLQSG 306
Q+ F ++E +E++L ++PD+S+ + L+ +W ++ RSS+ K D +++K
Sbjct: 234 DQDCFGSKEGWEELLHLLPDQSMVARLQKEWIADSSRSSDDKWDDLKREAKRIKKEKGDH 293
Query: 307 KQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEF 366
+ +E+IV +TYPRLD EVSKHRNHLLKAPFCVHPKTGRVC+P+DP D + F
Sbjct: 294 SAAFLNFQNLMEDIVLQYTYPRLDAEVSKHRNHLLKAPFCVHPKTGRVCVPVDPADVDTF 353
Query: 367 DPTTVPTLSELLRELNTGDSRMDV-----DNEWEKTSLGKSIRFF 406
DP VPT+++LL+EL+ + D ++WE+TSL I
Sbjct: 354 DPERVPTVAQLLQELDKIPAAADSGATEHHSDWERTSLKPYIEML 398
>gi|321258941|ref|XP_003194191.1| DNA primase small subunit [Cryptococcus gattii WM276]
gi|317460662|gb|ADV22404.1| DNA primase small subunit, putative [Cryptococcus gattii WM276]
Length = 429
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/410 (42%), Positives = 249/410 (60%), Gaps = 36/410 (8%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
D +P ++++Y RLFP+ ++ W+ N + P+ F REF+FTL D+YLR+QS
Sbjct: 14 DASSPQVMQLFYRRLFPYRPLYLWL---NQEQIPS---KLFTHREFAFTLAGDVYLRYQS 67
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
FN+ E + SI PS+ +IGP YS P R A G REL+FDID+TDYD
Sbjct: 68 FNNVDEFKVSIARHVPSRFEIGPQYSARPKDRKTLASGA---LQAQRRELVFDIDMTDYD 124
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
++R CC+ +C CW + A+KV+D +LR+ FGF H+LWVYSGRRG+HCW+ D A
Sbjct: 125 EIRTCCTDKTICKRCWGFIAAAVKVLDHSLRETFGFKHLLWVYSGRRGIHCWISDQTALD 184
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPG-----PLHPFLVRSYTEVLREFFEEKLLLS 248
LT++QR A+ + V KG + +KKV+ G PLHPFL + E L+ F +
Sbjct: 185 LTDDQRRALVTFLEVIKGGKEQSKKVNVRGPTGDAPLHPFLSEAL-ETLKPLFSSLCIYD 243
Query: 249 QNLFSTEERYEKILSMIP-DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
Q+ F E+ +E +L+++P D +V LR KW++N SS+ +W +L + + K
Sbjct: 244 QDCFKGEKGWEALLAILPTDRAVIGPLRAKWEKNPDSSSDD------KWRELMSEIAKHK 297
Query: 308 QK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
++ + + VE++V +TYPR+D EVSKHRNHLLK+PFCVHP TGRVC+PI+P +
Sbjct: 298 KEEAIMNKFTKAVEDVVLQYTYPRIDAEVSKHRNHLLKSPFCVHPGTGRVCVPINPSLID 357
Query: 365 EFDPTTVPTLSELLREL--------NTGDSRMDVDNEWEKTSLGKSIRFF 406
EFDP TVPT+ +LL EL + G RM+ ++E TSLG + F
Sbjct: 358 EFDPDTVPTVGQLLNELDNVKSEDPDAGGRRME---DYEHTSLGPYVEMF 404
>gi|170098002|ref|XP_001880220.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644658|gb|EDR08907.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 407
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/400 (42%), Positives = 242/400 (60%), Gaps = 30/400 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ +Y RL+P IF W++ H F +REF+FTL D+YLR+QSFNS +L
Sbjct: 1 MLTFYRRLYPFKAIFNWLN------HEHAPSKLFNQREFAFTLAGDVYLRYQSFNSHDDL 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + + P++ +IGPVYS P + GG F P+ REL+FDID+TDYD +R CCS
Sbjct: 55 KKQVCQLNPTRFEIGPVYSSKPRDKKTARAGG---FHPIMRELVFDIDMTDYDPIRTCCS 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA +C CW ++ A+ V+DTA+R+ FG++ +LWVYSGRRG+H W+ D +A LT++QR
Sbjct: 112 GAGICKRCWAFISAAVHVLDTAIREQFGYEQLLWVYSGRRGIHLWISDKEAMELTDQQRK 171
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLH--PFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
A+ + V +G +KK+S + P ++S E L F E +L QN F +E
Sbjct: 172 ALVGWLTVIQGGGKESKKLSIRSGMRSLPPSLQSILEHLAVVFSELILADQNCFGDKEGG 231
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQS---GKQKVQGLRR 315
E +L +IPD V LR W ++ S ED RW+ K ++S G Q+ L
Sbjct: 232 ETLLQLIPDAGVVVALRKLWSDD--PSRHSED----RWQDFKAQIRSCDKGSQQRLNLTA 285
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
+E+I+ +TYPRLD EVSKHRNHLLKAPFCVHPKTGR+C+P++PK ++FDP TVPT+
Sbjct: 286 AMEDIIIQYTYPRLDAEVSKHRNHLLKAPFCVHPKTGRICVPVNPKTIDDFDPETVPTVG 345
Query: 376 ELLRELN---------TGDSRMDVDNEWEKTSLGKSIRFF 406
+LLREL+ G+ R V +W +TSL +
Sbjct: 346 QLLRELDETQVTTEGEQGEGRPAV-ADWSRTSLKSYVEML 384
>gi|342883649|gb|EGU84103.1| hypothetical protein FOXB_05401 [Fusarium oxysporum Fo5176]
Length = 478
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/399 (44%), Positives = 249/399 (62%), Gaps = 24/399 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W++ H + FG REF+FTL ND YLR+QSF +
Sbjct: 91 DPEVMRSFYQRLFPWRYLFQWLN------HSPTPTNDFGNREFAFTLQNDAYLRYQSFPT 144
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P R + F P+ +EL FDID+TDYDD+R
Sbjct: 145 ADMLRKDVLRLMPSRFEIGPVYTTNPRDRKQLRNS--SAFKPLAKELCFDIDLTDYDDIR 202
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW MT+AIKV+D ALR+DFGF HI+WVYSGRRG H WVCD K R + +
Sbjct: 203 TCCDKANICNKCWQFMTMAIKVVDVALREDFGFKHIMWVYSGRRGAHAWVCDRKVRSMDD 262
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V KG S KKV+ PLHP L RS E+L+ F+E +L Q+ +++ E
Sbjct: 263 QKRRAIAGYLEVVKGGAQSGKKVNVRRPLHPHLARSL-EILKTHFQEDVLDVQDPWASAE 321
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR 315
+ EK+L ++P++++ LR KW R+S SK W + +SG K R+
Sbjct: 322 QSEKLLQLLPNQNLNESLRRKWDAAPGRASASK-------WADIDAVAKSGASKNLDARQ 374
Query: 316 CVE---EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
+E +IV +TYPRLD+EVSK NHLLK+PF VHP TGRVC+PI+ K+ E+FDP VP
Sbjct: 375 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPINTKNLEDFDPLGVP 434
Query: 373 TLSELLRELNT----GDSRMDVDNEWEKTSLGKSIRFFR 407
T+ +LL E+++ + +WEKTSL I FR
Sbjct: 435 TVQDLLAEIDSWKGEEEEGGKGTADWEKTSLKPYIEQFR 473
>gi|193662120|ref|XP_001950179.1| PREDICTED: DNA primase small subunit-like [Acyrthosiphon pisum]
Length = 408
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/413 (43%), Positives = 251/413 (60%), Gaps = 45/413 (10%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+YL VYY +LFP++ KW+SYGN F REFSFTL DIY+R+QSFN+
Sbjct: 7 PDYLNVYYKKLFPYSQFHKWLSYGN------VKPENFLNREFSFTLHEDIYIRYQSFNTL 60
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
E E I+ +CP KIDIG V+++ P Y Q F +E+EL+ DID+TDYD VR
Sbjct: 61 QEFETEIQNRCPFKIDIGAVFNMSPKVCRNYPQ-----FHALEKELVIDIDMTDYDQVRT 115
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGA+VC +CW M +A+K+++ A+RDDFG+ H+LWV+SGRRG+HCW+CD AR+L
Sbjct: 116 CCSGAEVCQKCWRFMVIAVKILERAIRDDFGWKHLLWVFSGRRGIHCWICDESARKLLPS 175
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
+RG+ DY V ++ V+ HP + RS + EF LL Q+ T E+
Sbjct: 176 ERGSFIDYLAVLSAGDSKRCNVN-----HPSVKRSIAIIKEEF--NSLLAEQDFLGTTEQ 228
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGL---- 313
KILS I DE + ++ ++ SK + RWE L + + ++ GL
Sbjct: 229 CNKILSFIADEKIKEQINLQF--------SKYQSSIQRWEALTVIVNNNHKR--GLLNFK 278
Query: 314 -RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
+ CVE+I+ YPRLD+ V+K NHLLK+PFCVHPKTG++CIPI+PK E+F+P TVP
Sbjct: 279 TKHCVEDILLYLAYPRLDVNVTKGLNHLLKSPFCVHPKTGKICIPINPKVIEKFNPNTVP 338
Query: 373 TLSELLRELNTGDSRM-DVDN----------EWEKTSLGKSIRFFRSSFLQPL 414
T++ L+ E+N D + ++ N +++KTSL KS+ F FL+ L
Sbjct: 339 TINVLIDEINEYDKKQKEIINDANLSSNRLKDYKKTSLLKSVNIFE-EFLRSL 390
>gi|398396092|ref|XP_003851504.1| hypothetical protein MYCGRDRAFT_44260 [Zymoseptoria tritici IPO323]
gi|339471384|gb|EGP86480.1| hypothetical protein MYCGRDRAFT_44260 [Zymoseptoria tritici IPO323]
Length = 494
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 253/423 (59%), Gaps = 32/423 (7%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P L+ +Y RL P +F+W++ H A + F REFSF L +R+ SF S
Sbjct: 86 PETLRQFYQRLCPFRHLFQWLN------HSATPQPDFQNREFSFWLPGSTVIRYLSFPSA 139
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
L + P + +IGP YS++P R + + F P+ +EL+FDID+TDYD +R
Sbjct: 140 DLLRKQCVQMTPERFEIGPQYSINPKDRKTLKKA--SAFKPIMKELVFDIDMTDYDSIRT 197
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGA +C++CW + +AIKV+D ALR+DFGF HI+WVYSGRRG H W+ D +AR + +
Sbjct: 198 CCSGAKICIKCWQFIVMAIKVVDKALREDFGFQHIMWVYSGRRGAHAWISDKRAREMDDT 257
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
+R A+A+Y +GNEN K+ +F PLHP + RS ++L +F+ +L Q+ + + E+
Sbjct: 258 KRRAVANYMEALRGNEN-GKRNAFRRPLHPHIERSL-KILTPYFQTDVLAEQDPWRSNEQ 315
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
EK+L++IPD+S+T LR KW+ RSS K W + ++G ++ V
Sbjct: 316 AEKLLALIPDKSLTDALRKKWESADRSSTQK-------WADIDAVAEAGNLSTLSTKQLV 368
Query: 318 E---EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
E +I +TYPRLD EVSK NHLLK+PF VHP TGRVC+PID + E+FDP TVPT+
Sbjct: 369 ETKQDIRLEYTYPRLDAEVSKKLNHLLKSPFVVHPGTGRVCVPIDIRSVEDFDPFTVPTV 428
Query: 375 SELLRELNTGDSRMDVD---------NEWEKTSLGKSIRFFR---SSFLQPLLKSCKEEM 422
++LL E++ + + D +W+KTSL I +FR +S ++ K +E
Sbjct: 429 TQLLSEIDDWEKKKGADMSDEEKAKIQDWQKTSLKPYIEYFRGHVASLVREEGKGKRERD 488
Query: 423 ESG 425
E G
Sbjct: 489 EDG 491
>gi|198436190|ref|XP_002129877.1| PREDICTED: similar to DNA primase small subunit (DNA primase 49 kDa
subunit) (p49) [Ciona intestinalis]
Length = 436
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 179/425 (42%), Positives = 257/425 (60%), Gaps = 28/425 (6%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY +FP+ KW+ YG+ S F +REFSFTL NDIY+R+QSF SE
Sbjct: 18 PSLLPIYYNYIFPYGPYCKWLFYGSK----TGSGSLFEKREFSFTLQNDIYVRYQSFASE 73
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+E +K+ P KIDIG +YS P R+ + G F P+ +EL+FDID+TDYDDVR
Sbjct: 74 AEFRKELKKMNPYKIDIGAIYSAPPKHRNRVSGGS---FKPLTKELVFDIDMTDYDDVRK 130
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CC GAD+C +CW LM++AIK+++ AL+DDFGF H+LWVYSGRRGVHCWVCD KAR L+
Sbjct: 131 CCQGADICKKCWTLMSIAIKILNRALKDDFGFKHLLWVYSGRRGVHCWVCDEKARSLSAH 190
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R +I +Y + + N K+V+ P+HP+ +R+ +V+R ++++ + Q ++
Sbjct: 191 ARSSIVEYLSLIQAG-NHEKRVTLRDPVHPY-IRNCHQVIRSYWDKYAIEDQGFLDEDKD 248
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLK----NTLQSGKQKVQGL 313
K+L +I D V R K ++ NS E RW++L+ +T +S ++ + L
Sbjct: 249 VAKVLKLISDLDV----REKVEKQFAGKNSAE-----RWKKLRETCTSTYESDPKRNRKL 299
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
R EI+ F +PRLD+ VSK NHLLK+PFCVHPKTGRVC+PID +EFDP VPT
Sbjct: 300 RYTSHEIMMEFCFPRLDVNVSKGINHLLKSPFCVHPKTGRVCVPIDVSRVDEFDPFAVPT 359
Query: 374 LSELL-----RELNTGDSRMDVDNE-WEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYK 427
+S+L E+ + +D E E + + FR + LQ +K +E+ K
Sbjct: 360 ISDLCTQVEKSEITPNEKTETLDTEVQEAGDSSNTKKLFRKTSLQEYMKPFDSLLENLQK 419
Query: 428 AKIQQ 432
+Q
Sbjct: 420 EAAKQ 424
>gi|452981791|gb|EME81551.1| hypothetical protein MYCFIDRAFT_198238 [Pseudocercospora fijiensis
CIRAD86]
Length = 450
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/403 (42%), Positives = 253/403 (62%), Gaps = 29/403 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P+ LK YYGRL P ++F+W++ H A + F REFSF L + +R+ +F S
Sbjct: 41 DPDTLKQYYGRLCPFRELFQWLN------HSATPQPDFQNREFSFWLPENRVIRYLAFPS 94
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + P + +IGP YS++P R + + F PV +EL+FDID+TDYD +R
Sbjct: 95 ADLLRKECVQMAPERFEIGPQYSINPKDRKTLKKA--SAFKPVMKELVFDIDMTDYDPIR 152
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CCSGA +C++CW + +AIKV+DTALR+DFGF HI+WVYSGRRG H W+ D +AR + +
Sbjct: 153 TCCSGAKICIKCWQFIVMAIKVVDTALREDFGFQHIMWVYSGRRGAHAWISDKRAREMDD 212
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+R AIA+Y V KGNENS + + F PLHP L RS +L +F + +L Q+ + +EE
Sbjct: 213 SKRKAIANYLDVVKGNENSKRSL-FRRPLHPHLERSL-RILNPYFTKDVLAEQDPWQSEE 270
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
R EK+L+++ D+++T+ L+ KW + S+S+ +W + ++G + RR
Sbjct: 271 RSEKLLALLQDQTLTAALKKKWDSSADRSSSQ------KWADIDTLAEAGHLSMDP-RRL 323
Query: 317 V---EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
V ++I +TYPRLD EVSK NHLLK+PF +HP TGRVC+PID + E+FDP +VPT
Sbjct: 324 VDNKQDIRLEYTYPRLDAEVSKKLNHLLKSPFVIHPGTGRVCVPIDMRRVEDFDPFSVPT 383
Query: 374 LSELLRELNTGDSRMDVD---------NEWEKTSLGKSIRFFR 407
+S+LL E++ + + + +W+KTSL I +F+
Sbjct: 384 VSDLLEEIDQWEKKQGANMSSEEKVQVKDWQKTSLKPYIDYFK 426
>gi|195440358|ref|XP_002068009.1| GK11955 [Drosophila willistoni]
gi|194164094|gb|EDW78995.1| GK11955 [Drosophila willistoni]
Length = 435
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 254/433 (58%), Gaps = 37/433 (8%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIY 68
N++PD L VYY RLFPH ++W+SYG + S F RE SFTL +DIY
Sbjct: 21 ANILPD-----MLPVYYRRLFPHLPFYRWLSYG------LSEDSIFCNREISFTLHDDIY 69
Query: 69 LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDID 128
+R+ F +++ELE I + P KIDIGPV + P + GG +PV+REL+FDID
Sbjct: 70 IRYLCFETQAELEKEICSRNPYKIDIGPVMNTKPKN---FRAGG---LSPVQRELVFDID 123
Query: 129 ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
+TDYDDVR CCSGA+VCL+CW M +A +++D ALR+DFGF+HILWV+SGRRG+HCWVCD
Sbjct: 124 MTDYDDVRTCCSGAEVCLKCWKFMVLAARILDQALREDFGFEHILWVFSGRRGIHCWVCD 183
Query: 189 GKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLL 246
+AR L RGA+A+Y + Y +N G V+ +++ FEE +L
Sbjct: 184 KQARHLDTRGRGAVAEYLNIISYVNVMGTNAARCQLGDRTHHSVKRALKLVEPLFEEIIL 243
Query: 247 LSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDI--NFFRWEQLKNTLQ 304
QNLF T + K+L MI ++S +EL Q+ I +F R+ N+++
Sbjct: 244 EDQNLFGTPKGLSKLLLMISEDSARNELESYLQKTHEDGAHSRSIWESFVRY---ANSMR 300
Query: 305 SGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKD 362
+ + + L+ VEE+ YPRLD+ V+K NHLLK+PFC+HP TG+VC+P
Sbjct: 301 TSGNVLWSRKLKHIVEEVQLCLLYPRLDINVTKGFNHLLKSPFCIHPATGKVCVPFSLSA 360
Query: 363 CEEFDPTTVPTLSELLRELNTGDSRMDVDNE----------WEKTSLGKSIRFFRSSFLQ 412
+FDPTTVPT+++LL E+N D + +D E +KTS+ K + F FL+
Sbjct: 361 VAKFDPTTVPTIAQLLHEINAFDDKTKMDQEAPEDKSRIKDHKKTSMFKGVVVF-EEFLR 419
Query: 413 PLLKSCKEEMESG 425
L + C + S
Sbjct: 420 KLERECNQSKSSN 432
>gi|380021036|ref|XP_003694380.1| PREDICTED: DNA primase small subunit-like [Apis florea]
Length = 416
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 175/412 (42%), Positives = 248/412 (60%), Gaps = 28/412 (6%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L YY RLFP D ++W+SYGN + F REFSFTL D+Y+RFQSF + EL
Sbjct: 11 LPTYYARLFPFHDYYRWLSYGN--------VNTFNNREFSFTLQGDVYIRFQSFKNVKEL 62
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
E I+ P KIDIG +Y+ P ++ G N F PVE+EL+FDID+TDYD++R CCS
Sbjct: 63 ELQIRRLLPVKIDIGAIYNYSPKEQ---KMRGTN-FHPVEKELVFDIDMTDYDEIRTCCS 118
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GAD+C CW M +A K++D ALR DFG+ HILWV+SGRRG+HCWVCD AR LT +RG
Sbjct: 119 GADICANCWKFMALACKILDNALRLDFGYKHILWVFSGRRGIHCWVCDPCARTLTVRERG 178
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
A+A+Y ++ G E KKV+ PG ++ E + F + QN+ T++ EK
Sbjct: 179 AVAEYLQIIDGGEYMKKKVNLPGDKIHHSIKRALETIETVFVPFCIEEQNILGTDDGVEK 238
Query: 261 ILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEI 320
L + D+ + EL+ + + ++SK+ N F + +++ +G +K R +EEI
Sbjct: 239 FLQIFNDDEIKQELKSLFGQ---CNSSKDRWNIFV-KHIRSKKTTGDKKWYQYRHLIEEI 294
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
+ + YPRLD+ VSK NHLLK+PFC+HPKTG+VCIP ++F P VPT+ L+ E
Sbjct: 295 MLQYAYPRLDIAVSKGMNHLLKSPFCIHPKTGKVCIPFTANTVDKFHPDKVPTIKTLIEE 354
Query: 381 LNTGDSRMDVDNE-----------WEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
+N D + + E ++KTSL KS+ F+ FL+ + KE+
Sbjct: 355 INEYDLKDKTEQETYDLNTKRIKDYKKTSLNKSLHIFQ-EFLRNMEAERKEQ 405
>gi|296420556|ref|XP_002839835.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636041|emb|CAZ84026.1| unnamed protein product [Tuber melanosporum]
Length = 516
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/405 (43%), Positives = 250/405 (61%), Gaps = 21/405 (5%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P + +Y RLFP +F+W+ N P D FG REF+FTL N YLR+QSF +
Sbjct: 109 DPQVILTFYQRLFPFRPLFQWL---NHSPIPCHD---FGHREFAFTLQNSAYLRYQSFPT 162
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L I PS+ +IGP+YS +P R + + F P+ +EL+FDID+TDYD++R
Sbjct: 163 MELLRKEILRLNPSRFEIGPIYSANPRDRKTLHK---SAFHPLSKELVFDIDLTDYDEIR 219
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C CW +TVAIKV++ ALRDD GF H+LWVYSGRRG H W+CD +AR L +
Sbjct: 220 TCCDKANICNLCWNFITVAIKVMNAALRDDLGFKHVLWVYSGRRGAHAWICDKRARSLDD 279
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+R AI +Y + KG + KKV+ PLHP + RS +L++ FE +L Q+ + E
Sbjct: 280 AKRRAIVNYLGLVKGGGQAGKKVNIWRPLHPHISRSLN-LLKDRFENDILREQDPWRDNE 338
Query: 257 RYEKILSMIPDESVTSELRGKW--QENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLR 314
R EK+L ++PD+++ LR KW +R S N D+ ++ K + G + L+
Sbjct: 339 RAEKLLQLLPDKTLNDALRKKWDNHPSRPSLNKWADV----YDVAKTGVSEGLNPAR-LK 393
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
EE+V + YPRLD EVSKH NHLLK+PFCVHP+TGRVC+PID +D FDP PT+
Sbjct: 394 ESREEVVLEYMYPRLDAEVSKHLNHLLKSPFCVHPQTGRVCVPIDERDLGAFDPMAAPTV 453
Query: 375 SELLRELNTGD---SRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK 416
LL E++ D R + +++EKTSL + +F+ +F+ LL+
Sbjct: 454 LGLLGEIDAWDKAHKREEKVDDYEKTSLKPYVDYFK-TFVNGLLR 497
>gi|425781234|gb|EKV19210.1| DNA primase [Penicillium digitatum PHI26]
gi|425783412|gb|EKV21265.1| DNA primase [Penicillium digitatum Pd1]
Length = 505
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/429 (43%), Positives = 259/429 (60%), Gaps = 43/429 (10%)
Query: 15 GFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSF 74
G + + + +Y RLFP +F+W+ N G P D FG REF+ TL ND YLR+QS+
Sbjct: 70 GVDSDIMLAFYQRLFPFRYLFQWL---NHGIVPTKD---FGNREFALTLQNDAYLRYQSY 123
Query: 75 NSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDD 134
+ I + PS+ +IGPVYS +P R +GG PV +EL+FDID+TDYDD
Sbjct: 124 PTADLFRKDILKMNPSRFEIGPVYSTNPRDRKTL-RGGQ--MKPVHKELVFDIDLTDYDD 180
Query: 135 VRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRL 194
+R CC ++C +CW +T++IKVIDTALR+DFGF+HILWVYSGRRG H WVCD +AR L
Sbjct: 181 IRTCCVNVNICAKCWSFVTMSIKVIDTALREDFGFEHILWVYSGRRGAHAWVCDPRARHL 240
Query: 195 TNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
+++R AIA Y + +G S KKV+ PLHP +VRS E+L+ F L Q+ F +
Sbjct: 241 PDDRRRAIAGYLEMVRGGSQSGKKVNIKRPLHPHIVRSL-ELLKHDFARTTLGDQDTFES 299
Query: 255 EERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQG 312
E+ E++LS++PD+ + LR KW+ NR S++ DI + L T +S
Sbjct: 300 AEQAERLLSLLPDKLLNESLRRKWESSPNRASTSKWADI-----DSLAKTGKSSTLNPAT 354
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
LR ++IV +TYPRLD EVSK HLLK+PF +HP TGR+C+PIDP++ E FDP +VP
Sbjct: 355 LRDAKQDIVLEYTYPRLDAEVSKKMIHLLKSPFVIHPGTGRICVPIDPRNAEHFDPLSVP 414
Query: 373 TLSELLRELN-------TGDSRMDVDN------------------EWEKTSLGKSIRFFR 407
T+ LL E++ G + D+ + ++EKTSL I FFR
Sbjct: 415 TVMTLLAEIDEYDAKHPAGSAEADIPDVEGSTMNGSDMKGSRKVQDYEKTSLKPYIDFFR 474
Query: 408 SSFLQPLLK 416
SF+ L++
Sbjct: 475 -SFIAGLIR 482
>gi|449544660|gb|EMD35633.1| hypothetical protein CERSUDRAFT_139515 [Ceriporiopsis subvermispora
B]
Length = 403
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/430 (40%), Positives = 254/430 (59%), Gaps = 38/430 (8%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ +Y RL+P IF W++ H F REF+FTL DIYLR+ SFN+ +L
Sbjct: 1 MLAFYRRLYPFRSIFGWLN------HEHAPTKLFTHREFAFTLQGDIYLRYNSFNTAEDL 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + + P++ +IGP+YS P + F P+ REL+FDID+TDYD +R CCS
Sbjct: 55 KKQVCQLNPTRFEIGPIYSARPRDKKTVRP---TAFTPLLRELVFDIDMTDYDTIRTCCS 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GAD+C CW ++ A++VID +R+ FG+ H+LWVYSGRRG+H W+ D +A LT+EQR
Sbjct: 112 GADICARCWVFISAAVRVIDEGIREQFGYKHLLWVYSGRRGIHLWISDKEAMELTDEQRR 171
Query: 201 AIADYFRVYKGNENSNKKVSF---PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
A+ + V +G + +KKV+ PL P L S + ++ + F + +L Q+ F + E
Sbjct: 172 ALVGWMMVIQGGKEMHKKVNVRIGSRPLPPSLQMSLSNLV-DVFGDLILEDQDCFRSREG 230
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLK---NTLQSGKQKVQGLR 314
+E +L +IPD +V LR +W+++ S+S +W LK + L G K L+
Sbjct: 231 WEALLHLIPDNNVVETLRKQWEKDPDRSSSD------KWGDLKSQVSALVKGTPKRAALK 284
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
+E+I+ +TYPRLD EVSKHRNHLLKAPFC+HPKTGRVC+P+DPK+ + F P VPT+
Sbjct: 285 AAMEDIILQYTYPRLDAEVSKHRNHLLKAPFCIHPKTGRVCVPVDPKNIDNFKPEHVPTV 344
Query: 375 SELLRELNTGDSRMDVD-----NEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAK 429
+LLREL+ + + + ++WEKTSL I + + ME +AK
Sbjct: 345 GQLLRELDEVTATVQAEGAEHHSDWEKTSLKPYIDMLDAHVMA--------LMEETRRAK 396
Query: 430 IQQTKNSLSW 439
K +SW
Sbjct: 397 ---RKTDMSW 403
>gi|195125531|ref|XP_002007231.1| GI12823 [Drosophila mojavensis]
gi|193918840|gb|EDW17707.1| GI12823 [Drosophila mojavensis]
Length = 434
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/416 (42%), Positives = 252/416 (60%), Gaps = 30/416 (7%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L VYY RLFPH ++W++YG+ + + F RE SFTL +DIY+R+ F ++
Sbjct: 29 PDMLPVYYRRLFPHEPFYRWLNYGHS------EDNIFVNREISFTLQDDIYIRYLCFETQ 82
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ELE I + P KIDIGPV ++ P + A G PV+REL+FDID TDYDD+R
Sbjct: 83 AELEKEICTRNPYKIDIGPVMNIRPKNFRSVAGG----LTPVQRELVFDIDATDYDDIRN 138
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGA++CL+CW M +A KV+D ALR+DFGF+H+LW++SGRRG+HCWVCD AR L
Sbjct: 139 CCSGAEMCLKCWKFMMLAAKVLDVALREDFGFEHMLWIFSGRRGIHCWVCDHTARHLDAR 198
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R A+A+Y + N +V H L R+ +++ FEE +L QNLF + +
Sbjct: 199 ARAAVAEYLNILTYTNNV-ARVQIGDRTHHSLRRAL-KIVEPMFEEIILEDQNLFGSPKG 256
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDI--NFFRWEQLKNTLQSGKQKV--QGL 313
K+L M+ DE+ S L Q++ + I +F R+ N++++ V + L
Sbjct: 257 VSKLLQMVSDEAARSNLEAYLQKSHEDGAHSKLIWESFVRY---ANSMRTSAANVWSRKL 313
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
+ VEE+ YPRLD+ V+K NHLLKAPFC+HP TG+VCIP +FDPTTVPT
Sbjct: 314 KHIVEEVQLCLLYPRLDINVTKGFNHLLKAPFCIHPATGKVCIPFSASAVGKFDPTTVPT 373
Query: 374 LSELLRELNTGD----SRMDVD------NEWEKTSLGKSIRFFRSSFLQPLLKSCK 419
+S+LL+E+N D S MD +++KTS+ K + F FL+ L ++ K
Sbjct: 374 ISQLLQEINAYDDKTKSYMDAPEDKSRIKDYKKTSMFKGVVVF-EEFLRKLERNFK 428
>gi|145353341|ref|XP_001420974.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357426|ref|XP_001422920.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581210|gb|ABO99267.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583164|gb|ABP01279.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 398
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 243/378 (64%), Gaps = 22/378 (5%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD-------NDIYLRFQSFNS 76
YY + +P +FKW+++GND RH +K+Y RREF F LD +I+ R+QSF
Sbjct: 4 YYKQFYPADLLFKWLAHGNDERHARAEKTYPSRREFCFVLDKEQEEGGGEIFARYQSFVD 63
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
+ + +++ K P++I+ GP+ + P+ RH P EREL+FDID+TDYDDVR
Sbjct: 64 AKDFKTNVERKKPARIEFGPICNRRPSDRHTVE------LKPEERELVFDIDMTDYDDVR 117
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A +C +CWPLMTVA+KV+D LR+DFGF H+LWVYSGRRG+HCW+ D +AR+L++
Sbjct: 118 TCCKEAGICGKCWPLMTVALKVLDVGLREDFGFKHLLWVYSGRRGIHCWISDERARKLSD 177
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
E R A+A+YF V KG E ++V P+HP + R+Y VL++++ E L +Q + +
Sbjct: 178 EARSAVAEYFAVVKG-EGQGRRVLSSTPMHPSVKRAYDGVLKQYWIESYLPTQRILEDKT 236
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQ-SGKQKVQGLRR 315
+ E++L++IPDE++ +L ++ + S NS + RW ++ +Q S K+ L
Sbjct: 237 KLEQLLNLIPDENIREDLASEFATS--SLNSVD-----RWGVIERRVQDSLKKNNYKLTG 289
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
+E+I+ YPR+D+EVS+H NHLLK PFCVHPKTGRVC+P+DP + F+P VPT+
Sbjct: 290 ALEKIILWHIYPRVDIEVSRHMNHLLKGPFCVHPKTGRVCVPMDPATADSFNPELVPTVV 349
Query: 376 ELLRELNTGDSRMDVDNE 393
+L T D + N+
Sbjct: 350 DLDSGAQTLDGAIKTFND 367
>gi|242823400|ref|XP_002488065.1| DNA primase subunit Pri1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712986|gb|EED12411.1| DNA primase subunit Pri1, putative [Talaromyces stipitatus ATCC
10500]
Length = 508
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/419 (42%), Positives = 253/419 (60%), Gaps = 33/419 (7%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
P G +P + +Y RLFP +F+W+ N G P+ D REF+ L N+ LR+Q
Sbjct: 87 PSGIDPEVMLAFYQRLFPFRPMFQWL---NHGVIPSPD---MVNREFAVFLQNEAVLRYQ 140
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY 132
SF + I P++ +IGPVYS +P R + PV +EL+FDID+TDY
Sbjct: 141 SFATADLFRKEILRLNPTRFEIGPVYSTNPRDRKSRPG---TQMKPVAKELVFDIDMTDY 197
Query: 133 DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKAR 192
DDVR CCS A++C +CW +T+AIK++DTALR+DFGF+HILWVYSGRRG H WV D +AR
Sbjct: 198 DDVRTCCSKANICHKCWAFITMAIKIVDTALREDFGFEHILWVYSGRRGAHAWVGDHRAR 257
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
L +++R AIA Y + KGN+ S K+V+ PLHP + RS ++L +F + L+ Q++F
Sbjct: 258 TLPDDRRKAIAGYLELVKGNDKSGKRVNLKRPLHPHVARS-VKLLEPYFNQTTLIDQDVF 316
Query: 253 STEERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
E + E++L ++PD+ ++ LR KW +R S+N DI L T+ K
Sbjct: 317 LGESQAERLLGLLPDKKLSEALRRKWDSTPDRTSTNKWNDI-----VTLAKTINGLDAK- 370
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
L+ +IV +TYPRLD EVSK HLLK+PF +HP TGRVC+P+D ++ EEFDP +
Sbjct: 371 -ALKDARYDIVLEYTYPRLDAEVSKKMIHLLKSPFVIHPGTGRVCVPMDGRNIEEFDPLS 429
Query: 371 VPTLSELLREL------------NTGDSRMDVD-NEWEKTSLGKSIRFFRSSFLQPLLK 416
VPT++ELL E+ N D D ++EKT L + +FR SF+ L+K
Sbjct: 430 VPTVTELLAEIDEYDRENPPPASNAEDGSSDRKIQDYEKTRLKPYVDYFR-SFVANLIK 487
>gi|426197348|gb|EKV47275.1| hypothetical protein AGABI2DRAFT_192501 [Agaricus bisporus var.
bisporus H97]
Length = 417
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 240/397 (60%), Gaps = 36/397 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P + YY RL+P IF W++ H F RE++FTL D+YLR+ SF +
Sbjct: 12 PEVMLTYYRRLYPFRPIFTWLN------HDHTPTRLFTHREWAFTLAGDVYLRYNSFATA 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+L+ + + P++ +IGPVYS P R F PV+REL+FD+D+TDYD +R
Sbjct: 66 EDLKKQVCDLNPTRFEIGPVYSARPRDRKTVRPSA---FQPVQRELVFDLDMTDYDPIRT 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C CW +T A++V+D A+RD FG++H+LWVYSGRRG+H W+ D +A LT++
Sbjct: 123 CCSDADICKRCWAFITAAVRVLDPAIRDQFGYEHLLWVYSGRRGIHLWISDKEALDLTDQ 182
Query: 198 QRGAIADYFRVYKGNENSNKKV-------SFPGPLHPFLVRSYTEVLREFFEEKLLLSQN 250
+R AI + V ++SNK++ S P PL L E L+ F +L Q+
Sbjct: 183 ERKAIVGWMTVVNSGKDSNKRLSVRTSSKSLPAPLQNVL-----ENLKHTFTTLILRDQD 237
Query: 251 LFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
LF++ E +L IPD+ + +++ W NS + +W +L T++S K
Sbjct: 238 LFASNEAAAALLEHIPDQEIVEKVKTNW------INSACSTSEAKWVELLKTVRSSKSS- 290
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
L+ +E+I+ +TYPRLD EVSKHRNHLLKAPFCVHPKTGRVC+P+DP+ EEFDP
Sbjct: 291 DTLQAAMEDIILYYTYPRLDAEVSKHRNHLLKAPFCVHPKTGRVCVPVDPEKVEEFDPEA 350
Query: 371 VPTLSELLRELNTGDSRMDVD--------NEWEKTSL 399
VPT+++LLREL++ + + ++WEKTSL
Sbjct: 351 VPTVAQLLRELDSITPATNSEESGNEHHHSDWEKTSL 387
>gi|430811943|emb|CCJ30592.1| unnamed protein product [Pneumocystis jirovecii]
Length = 427
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 177/417 (42%), Positives = 252/417 (60%), Gaps = 37/417 (8%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P+ + +Y R+FP FKW+ Y R K+ F RE +FTL ND YLR+ SF +
Sbjct: 11 DPSVIFAFYQRIFP----FKWIFYEWLNRSSVPSKA-FCNREIAFTLQNDAYLRYNSFPT 65
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
+ PS+ +IGPVY+ +P R + +F P+E+EL+FDID+TDYDDVR
Sbjct: 66 YEAFRKEVLRLNPSRFEIGPVYNANPRDRKTLRKA---MFKPLEKELVFDIDLTDYDDVR 122
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC D+C +CW +T AIKVID LR+DFGF HILWVYSGRRGVH WVCD +AR L++
Sbjct: 123 TCCFKTDICSKCWCFITAAIKVIDLTLREDFGFQHILWVYSGRRGVHAWVCDKRARELSD 182
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R A++ Y + +G+ S KKV PLHP + RS +L+E F +L+SQN + ++E
Sbjct: 183 QKRKAVSVYLELVRGSTTSGKKVDLKRPLHPSISRSL-RILKETFRSDILISQNPWESDE 241
Query: 257 RYEKILSMIPDESVTSELRGKWQE-NRRSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
EK+L I D LR KW+ +RSS +K W+ + + + G K +
Sbjct: 242 GSEKLLEFITD---NESLRKKWKSFPKRSSYNK-------WQDIDSVAEEGVSKNLDTKA 291
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++I+ + YPRLD+EVSKH NHLLK+PFCVHP TGR+C+PID E FDP VP
Sbjct: 292 LLAAKQDIILEYMYPRLDVEVSKHLNHLLKSPFCVHPGTGRICVPIDHNSLENFDPFKVP 351
Query: 373 TLSELLRELNTGDSRMDVDN-------------EWEKTSLGKSIRFFRSSFLQPLLK 416
T+++LL E++T D + ++ ++EKTSL I +F+ F+ ++K
Sbjct: 352 TVTQLLHEIDTWDKEREENDGISETSEKHEHISDYEKTSLKPYIEYFK-KFVSLIIK 407
>gi|427784145|gb|JAA57524.1| Putative eukaryotic-type dna primase catalytic small subunit
[Rhipicephalus pulchellus]
Length = 411
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 181/408 (44%), Positives = 252/408 (61%), Gaps = 34/408 (8%)
Query: 12 IPDGFNP----NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDI 67
+ +NP ++L +YYG+LFP +KW++Y DKS G RE SFTL +D+
Sbjct: 4 VSSAYNPEFLDDFLPLYYGKLFPIDAFYKWITYS--------DKSRGGNREISFTLRDDV 55
Query: 68 YLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDI 127
Y+RFQSF+++ E + ++K+K P KIDIG VY+ P H + F P EREL+FDI
Sbjct: 56 YIRFQSFSNKQEFQKALKDKRPHKIDIGAVYNYSPKNHH------EPSFGPTERELVFDI 109
Query: 128 DITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVC 187
D+TDYDDVR CC GAD+C CW MT+A++++D LRDDFGF HILWVYSGRRGVHCWVC
Sbjct: 110 DMTDYDDVRTCCQGADICKSCWAFMTLAMQILDRVLRDDFGFKHILWVYSGRRGVHCWVC 169
Query: 188 DGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLL 247
D +ARRL R AIA Y + K S+KKVS LHP VR ++++++F L
Sbjct: 170 DARARRLRAGARAAIASYISLLKSQAQSSKKVSLFKSLHP-SVRETLKIVKDYFPVIALQ 228
Query: 248 SQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
+Q + ++ + ++S D S ++ ++N S S E RWE ++ +
Sbjct: 229 NQKVLEGDKFWHDVVSASSDNSFKEDI----EKNVLSQTSCEK----RWEAFVAVVEKAQ 280
Query: 308 QKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFD 367
QK + +EE++ YPRLD+ V+K HLLKAPF VHPKTGRVC+PID D +FD
Sbjct: 281 QKSTRYQFILEEVMLELCYPRLDVAVTKGTQHLLKAPFSVHPKTGRVCVPIDITDVTDFD 340
Query: 368 PTTVPTLSELLRELNTGDSR---MDVDN----EWEKTSLGKSIRFFRS 408
P TVPT+S+L E++ D++ MDV + E++KT L S+ F+S
Sbjct: 341 PFTVPTVSQLCNEIDEYDAQHKTMDVGSSAVQEYKKTGLASSVALFQS 388
>gi|409080447|gb|EKM80807.1| hypothetical protein AGABI1DRAFT_112534 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 417
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 240/397 (60%), Gaps = 36/397 (9%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P + YY RL+P IF W++ H F RE++FTL D+YLR+ SF +
Sbjct: 12 PEVMLTYYRRLYPFRPIFTWLN------HDHTPTRLFTHREWAFTLAGDVYLRYNSFATA 65
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+L+ + + P++ +IGPVYS P R F PV+REL+FD+D+TDYD +R
Sbjct: 66 EDLKKQVCDLNPTRFEIGPVYSARPRDRKTVRPSA---FQPVQRELVFDLDMTDYDPIRT 122
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C CW +T A++V+D A+RD FG++H+LWVYSGRRG+H W+ D +A LT++
Sbjct: 123 CCSDADICKRCWAFITAAVRVLDPAIRDQFGYEHLLWVYSGRRGIHLWISDKEALDLTDQ 182
Query: 198 QRGAIADYFRVYKGNENSNKKV-------SFPGPLHPFLVRSYTEVLREFFEEKLLLSQN 250
+R AI + V ++SNK++ S P PL L E L+ F +L Q+
Sbjct: 183 ERKAIVGWMTVVNSGKDSNKRLSVRTSSKSLPAPLQNVL-----ENLKHTFTTLILRDQD 237
Query: 251 LFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
LF++ E +L IPD+ + +++ W NS + +W +L T++S K
Sbjct: 238 LFASNEAAAALLEHIPDQEIVEKVKTNW------INSACSTSEAKWVELLKTVRSSKSS- 290
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
L+ +E+I+ +TYPRLD EVSKHRNHLLKAPFCVHPKTGRVC+P+DP+ EEFDP
Sbjct: 291 DILQAAMEDIILYYTYPRLDAEVSKHRNHLLKAPFCVHPKTGRVCVPVDPEKVEEFDPEA 350
Query: 371 VPTLSELLRELNTGDSRMDVD--------NEWEKTSL 399
VPT+++LLREL++ + + ++WEKTSL
Sbjct: 351 VPTVAQLLRELDSITPATNSEESGNEHHHSDWEKTSL 387
>gi|453084772|gb|EMF12816.1| DNA primase small subunit [Mycosphaerella populorum SO2202]
Length = 450
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/411 (43%), Positives = 244/411 (59%), Gaps = 26/411 (6%)
Query: 8 QGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDI 67
Q P P LK YY RL P +F+W++ H A + F REFSF L +
Sbjct: 31 QSAPKPKFAEPETLKQYYSRLCPFRSLFQWLN------HSATPQPDFQNREFSFWLPENR 84
Query: 68 YLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDI 127
+R+ SF S L + P + +IGP Y+++P R + F PV +EL+FDI
Sbjct: 85 VIRYLSFPSADLLRKQCVQMAPERFEIGPQYNINPKDRKSLKSASK--FKPVMKELVFDI 142
Query: 128 DITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVC 187
D+TDYD +R CCSG +C +CW + +AIKVIDTALR+DFGF HI+WVYSGRRG H W+
Sbjct: 143 DMTDYDPIRTCCSGTKICKKCWRFIVMAIKVIDTALREDFGFQHIMWVYSGRRGAHAWIS 202
Query: 188 DGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLL 247
D +AR + + +R A+A+Y V KGNENS K++ PLHP + RS +L +F+E +L
Sbjct: 203 DKRAREMNDSKRKAVANYLEVLKGNENS-KRMLRRRPLHPHIERSLN-ILTPYFKEDILA 260
Query: 248 SQNLFSTEERYEKILSMIPDESVTSELRGKW--QENRRSSNSKEDINFFRWEQLKNTLQS 305
Q+ + +ER EK+LS+IPDE +TS L+ KW NR S+ DI+ +TL S
Sbjct: 261 EQDPWQEDERIEKLLSLIPDEKLTSALKKKWDSASNRTSTQKWSDIDALAEAGSLSTL-S 319
Query: 306 GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEE 365
KQ V+ +++ +TYPRLD EVSK NHLLK+PF +HP TGRVC+PID + EE
Sbjct: 320 TKQLVEA----KQDVRLEYTYPRLDAEVSKKLNHLLKSPFVIHPGTGRVCVPIDMRRLEE 375
Query: 366 FDPTTVPTLSELLRELNTGDSRMDVD---------NEWEKTSLGKSIRFFR 407
FDP VP +++LL E++ D +W+KTSL + +FR
Sbjct: 376 FDPFKVPLVTDLLDEIDQWDKNQGSSLSEEQKAKVQDWQKTSLKPYVEYFR 426
>gi|195491230|ref|XP_002093473.1| GE20733 [Drosophila yakuba]
gi|194179574|gb|EDW93185.1| GE20733 [Drosophila yakuba]
Length = 438
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 250/433 (57%), Gaps = 30/433 (6%)
Query: 5 GPKQGNVIPDGFNPNYLK----VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
P+Q +NP L+ VYY RLFPH ++W+SYG + + F RE S
Sbjct: 12 APQQQTTAVHAYNPEVLQDMLPVYYRRLFPHLPFYRWLSYG------LSEDAIFCNREIS 65
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTL +DIY+R+ F++++ELE I + P KIDIGPV P K H GG PV+
Sbjct: 66 FTLQDDIYIRYLCFDTQAELEKEICSRNPIKIDIGPVMHTKP-KNHRSIPGG---LTPVQ 121
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDID+TDYDDVR CCSGA+VCL+CW M +A +VID ALR+DFGF+HI+W++SGRR
Sbjct: 122 RELVFDIDMTDYDDVRTCCSGAEVCLKCWKFMVLAARVIDVALREDFGFEHIIWIFSGRR 181
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
G+HCWVCD +AR L R A+A+Y + Y SN G ++ +++
Sbjct: 182 GIHCWVCDHQARHLDGRGRYAVAEYLNIITYANFSGSNSPRCAMGERPHHSIKRALKIVE 241
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDI--NFFRW 296
FEE +L QNLF T + K+L+M+ D+S EL Q+N + +F ++
Sbjct: 242 PMFEEIVLEDQNLFGTPKGVTKLLNMVHDDSARGELESYLQKNLEDGAHSRLVWESFIKY 301
Query: 297 EQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCI 356
T + + L+ V EI YPRLD+ V++ NHLLKAPFC+HP TG+VC+
Sbjct: 302 ASSMRT-SAANAWSRKLKNIVSEIQLGLLYPRLDINVTRGFNHLLKAPFCIHPATGKVCV 360
Query: 357 PIDPKDCEEFDPTTVPTLSELLRELNTGD----SRMDVD------NEWEKTSLGKSIRFF 406
P +FDPTTVPT+++LL E+N D S M+ + +KTS+ K + F
Sbjct: 361 PFSVSAVAKFDPTTVPTITQLLHEINAFDDKSKSYMEAPEDKSRIKDHKKTSMFKGVVVF 420
Query: 407 RSSFLQPLLKSCK 419
FL+ L +S K
Sbjct: 421 -EEFLRKLERSQK 432
>gi|302686290|ref|XP_003032825.1| hypothetical protein SCHCODRAFT_53958 [Schizophyllum commune H4-8]
gi|300106519|gb|EFI97922.1| hypothetical protein SCHCODRAFT_53958 [Schizophyllum commune H4-8]
Length = 440
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/394 (43%), Positives = 243/394 (61%), Gaps = 29/394 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ +Y RL+P IF W+ N P F +REF+FTL ND YLR+QSFN+ ++
Sbjct: 14 MRTFYKRLYPFKAIFNWL---NQDHVPT---PLFTQREFAFTLSNDAYLRYQSFNNADDM 67
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + P++ +IGP+YS P R G F P +REL+FDID+TDYD VR CCS
Sbjct: 68 KKQVLAMNPTRFEIGPMYSAKPRDRKLLRPGN---FTPQKRELVFDIDMTDYDPVRTCCS 124
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GAD+C CW +T A+KVID A+RD +G++H+LWVYSGRRG+H W+ D +A LT++QR
Sbjct: 125 GADICRRCWGFITAAVKVIDAAIRDQYGYEHLLWVYSGRRGIHLWISDQEAMELTDDQRR 184
Query: 201 AIADYFRVYKGNENSNKK---VSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
AI ++ V + K V P +R + L+ F + +L Q+ F++EE
Sbjct: 185 AIVNWLSVVPPSSKGEGKKINVRIGNRPVPACIRDAIDELKTIFSDLILEDQDCFASEEG 244
Query: 258 YEKILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR 315
YE +L +IPD S+ + L +WQ++ R S + EDI R E K S ++ + +
Sbjct: 245 YEILLKLIPDSSIVATLTERWQDDPHRSSVDKWEDI---RKEMKKYERNSRERTI--MTN 299
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
+E+IV +TYPRLD EVSKHRNHLLKAPFC+HPKTGRVC+P++P + + FDP VPT+
Sbjct: 300 ALEDIVLQYTYPRLDTEVSKHRNHLLKAPFCIHPKTGRVCVPVNPAEIDSFDPMAVPTVQ 359
Query: 376 ELLRELNTGDSRMDV----------DNEWEKTSL 399
+LLREL+ + V ++++EKTSL
Sbjct: 360 QLLRELDRASGQEGVGAGDKAGEEKEHDYEKTSL 393
>gi|428167929|gb|EKX36880.1| DNA primase small subunit [Guillardia theta CCMP2712]
Length = 425
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/412 (42%), Positives = 254/412 (61%), Gaps = 28/412 (6%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L++YYG+LFP+ +F+W+SY + F RREFSFTL ND+Y+R+ S++S E
Sbjct: 17 LRIYYGKLFPYDAMFQWLSYSPAEQSNDSKSEVFARREFSFTLANDVYIRYLSYSSAQEW 76
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDD---VRY 137
+ + +K P KID+G VY+ +P ++ A + F + RE + DID+TDY D ++
Sbjct: 77 KADMMKKLPHKIDMGAVYTKEPNQK---AYVSKDAFKEMSREFVLDIDLTDYQDDGTIKT 133
Query: 138 CCSGADV--CLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
C + + W M VA+KV+DTALR+DFGF H+LWV+SGRRG+HCWVCD +AR L+
Sbjct: 134 NCIDPSIPEFRDSWRFMAVAVKVLDTALRNDFGFKHLLWVFSGRRGIHCWVCDERARNLS 193
Query: 196 NEQRGAIADYFRVYKGNENSNKKVSFPG-PLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
++ R A+A+Y ++KG E K++ G +HP L R+Y VL F LL + +
Sbjct: 194 DQGRTAVAEYLNIFKGGEKEKTKLTAVGFNMHPMLQRAYENVLLPSFTR--LLEEQGWLD 251
Query: 255 EERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLR 314
+E+ + L +I D V L +W +R+ N+ E RWE L+N L+ +K + R
Sbjct: 252 DEKADATLDLIGDSEVKDILLDRW--SRKKRNAAE-----RWEDLQNELRKTAKKGKITR 304
Query: 315 R---CVEE----IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFD 367
+ VEE +VF FTYPRLD+ VSK NHLLK+PFCVHPKT +VC+P+DP++ +EFD
Sbjct: 305 KKASQVEETIRFLVFRFTYPRLDINVSKMMNHLLKSPFCVHPKTQKVCVPLDPQNVDEFD 364
Query: 368 PTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCK 419
P VP L ELLRE++ S+ D +TSL ++ F+ FL+PL S K
Sbjct: 365 PVEVPVLDELLREMDRSTSQ---DKNNIQTSLDGYVKLFKLRFLRPLAISIK 413
>gi|195375608|ref|XP_002046592.1| GJ12966 [Drosophila virilis]
gi|194153750|gb|EDW68934.1| GJ12966 [Drosophila virilis]
Length = 434
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 249/416 (59%), Gaps = 30/416 (7%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L VYY RLFPH ++W++YG+ + + F RE SFTL +DIY+R+ F ++
Sbjct: 29 PDMLPVYYRRLFPHEPFYRWLNYGHS------EDNIFVNREISFTLQDDIYIRYLCFETQ 82
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ELE I + P KIDIGPV + P A G PV+REL+FDID TDYDD+R
Sbjct: 83 AELEKEICSRNPYKIDIGPVMNTRPKNFRTVAGG----LTPVQRELVFDIDATDYDDIRN 138
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGA++CL+CW M +A +V+D ALR+DFGF+H+LW++SGRRG+HCWVCD AR L
Sbjct: 139 CCSGAEICLKCWKFMMLAARVLDAALREDFGFEHMLWIFSGRRGIHCWVCDHTARHLDAR 198
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R A+A+Y + N+ +V H L R+ ++L FEE +L QNLF T +
Sbjct: 199 ARAAVAEYLNILTYTNNT-ARVQMGDRTHHSLRRA-LKILEPMFEEIVLEDQNLFGTPKG 256
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDI--NFFRWEQLKNTLQSGKQKV--QGL 313
++L M+ DE+ ++L Q+ + + +F R+ N++++ V + L
Sbjct: 257 VNRLLQMVSDEAARNDLESYLQKQHEDGAHSKLVWDSFVRY---ANSMRTSAANVWSRKL 313
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
+ V+E+ YPRLD+ V+K NHLLKAPFC+HP TG+VCIP +FDPTTVPT
Sbjct: 314 KHIVQEVQLCLLYPRLDINVTKGFNHLLKAPFCIHPATGKVCIPFSVSAVAKFDPTTVPT 373
Query: 374 LSELLRELNTGDSRMDVDNE----------WEKTSLGKSIRFFRSSFLQPLLKSCK 419
+S+LL+E+N D + E ++KTS+ K + F FL+ L ++ K
Sbjct: 374 ISQLLQEINAYDDKTKSYMEAPEDKSRIKDYKKTSMFKGVVVF-EEFLRKLERNFK 428
>gi|261195843|ref|XP_002624325.1| DNA primase small subunit [Ajellomyces dermatitidis SLH14081]
gi|239587458|gb|EEQ70101.1| DNA primase small subunit [Ajellomyces dermatitidis SLH14081]
gi|239614410|gb|EEQ91397.1| DNA primase small subunit [Ajellomyces dermatitidis ER-3]
Length = 539
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/447 (40%), Positives = 253/447 (56%), Gaps = 62/447 (13%)
Query: 35 FKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDI 94
F+W+ N G P+ D FG REFSFTL N+ LR+QSF + L I P++ +I
Sbjct: 90 FQWL---NHGVKPSPD---FGNREFSFTLQNNAVLRYQSFPTAELLRKEILHLKPTRFEI 143
Query: 95 GPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTV 154
GP+YS +P R + + + F PV +EL+FDID+TDYDD+R CC+ A++C +CW T+
Sbjct: 144 GPIYSTNPRDRKSLRKA--SRFRPVSKELVFDIDLTDYDDIRTCCTKANICQKCWSFATM 201
Query: 155 AIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNEN 214
AIKV+D ALR+DFGF+HILWVYSGRRG H WVCD +AR L +++R AI Y +G
Sbjct: 202 AIKVVDAALREDFGFEHILWVYSGRRGAHAWVCDRRARDLPDDRRKAITGYLEAIRGGSQ 261
Query: 215 SNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSEL 274
S KKV+ PLHP + RS E+L+ +F +L+ Q+ FS E+ E++LS++PD+ + L
Sbjct: 262 SGKKVNLKRPLHPHIARSL-EILKPYFASTILVEQDTFSKPEQAEQLLSLLPDKPLADAL 320
Query: 275 RGKWQE--NRRSSNSKEDINFF------RWEQLKNTLQSGKQK------VQGLRRCVEEI 320
R KW +R S N DI+ R EQ + G + L ++I
Sbjct: 321 RRKWDSAPDRSSVNKWNDIDALAKSTKSRAEQQDGKGRGGASSSNRPIDTKALLEAKQDI 380
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
+TYPRLD EV K HLLK+PF VHP TGRVC+PID + E+FDP VPT+ EL+ E
Sbjct: 381 ALEYTYPRLDAEVGKKLIHLLKSPFVVHPGTGRVCVPIDIRRVEQFDPLRVPTVGELIAE 440
Query: 381 LNT---GD-----------------------------SRMDVD------NEWEKTSLGKS 402
+N GD S D+D ++EKTSL
Sbjct: 441 INAWEGGDELRDDDANDVNSNGAAVKDEQMVGDVLPSSTADIDGRGRKVQDYEKTSLKPY 500
Query: 403 IRFFRSSFLQPLLKSCKEEMESGYKAK 429
I +FR SF+ LLK+ + + G + +
Sbjct: 501 IDYFR-SFVAGLLKAERTGVGMGKRGR 526
>gi|389749098|gb|EIM90275.1| prim-pol domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 415
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 252/423 (59%), Gaps = 29/423 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P + +Y RL+P +FKW++ H + RE +++L ND+YLR+QSF +
Sbjct: 9 SPEVMNAFYRRLYPFKSVFKWLN------HEHTPTRQWTNREIAYSLQNDVYLRYQSFAN 62
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
E + P++ +IGPVYS P + + P+ REL+FDID+TDYD +R
Sbjct: 63 ADEFKKQTCTLNPTRFEIGPVYSARPKDKKVMR---NTALTPLLRELVFDIDMTDYDSIR 119
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC+GA +C CW ++ A+ VID+++R+ FG+ H+LWVYSGRRG+H WV D +A LT+
Sbjct: 120 TCCTGASICKRCWGFISAAVIVIDSSIREHFGYQHLLWVYSGRRGIHLWVSDREAMELTD 179
Query: 197 EQRGAIADYFRVYKGNENSNKKVSF-------PGPLHPFLVRSYTEVLREFFEEKLLLSQ 249
EQR A+ + V G + KKV+ P P V+ +L F + +L Q
Sbjct: 180 EQRRAVVGWMTVVAGGKEMAKKVNVRINGGKGTEPSLPPAVKDALGILVGRFTDLILADQ 239
Query: 250 NLFSTEERYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQ 308
+ F R+E++L +IPD+S+ L+ KW ++ R+S K W+ LK +Q K+
Sbjct: 240 DCFQERARWEELLKLIPDKSIVRSLQDKWDDDEDRTSEEK-------WDNLKREIQKYKK 292
Query: 309 KVQG-LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFD 367
+G + +E+IV +TYPR+D EVSKHRNHLLKAPFCVHPKTGR+C+PIDP+ +EFD
Sbjct: 293 SERGPMMAALEDIVLQYTYPRIDAEVSKHRNHLLKAPFCVHPKTGRICVPIDPELVDEFD 352
Query: 368 PTTVPTLSELLRELNT--GDSRMDVDNEWEKTSLGKSIRFFR--SSFLQPLLKSCKEEME 423
P TVPT+ +LL+EL+ +S + ++WEKTSL + + L ++ K EM+
Sbjct: 353 PDTVPTVGQLLQELDATKTESSTEEHSDWEKTSLKPYVDMLEKYAMGLMGEVRRVKREMD 412
Query: 424 SGY 426
+ +
Sbjct: 413 TSW 415
>gi|194865922|ref|XP_001971670.1| GG14305 [Drosophila erecta]
gi|190653453|gb|EDV50696.1| GG14305 [Drosophila erecta]
Length = 436
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 166/394 (42%), Positives = 230/394 (58%), Gaps = 25/394 (6%)
Query: 5 GPKQGNVIPDGFNPNYLK----VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
P+Q +NP L+ VYY RLFPH ++W+SYG+ + + F RE S
Sbjct: 10 APQQQTTAVHAYNPEVLQDMLPVYYRRLFPHLPFYRWLSYGSS------EDAIFSNREIS 63
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTL +DIY+R+ F++++ELE I + P KIDIGPV P K H GG PV+
Sbjct: 64 FTLPDDIYIRYLCFDTQAELEKEICSRNPIKIDIGPVMHTKP-KNHRSIPGG---LTPVQ 119
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDID+TDYDDVR CCSGA+VCL+CW M +A +V+D ALR+DFGF+HI+W++SGRR
Sbjct: 120 RELVFDIDMTDYDDVRTCCSGAEVCLKCWKFMVLAARVLDVALREDFGFEHIIWIFSGRR 179
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
G+HCWVCD +AR L R A+A+Y + Y +N G ++ +++
Sbjct: 180 GIHCWVCDHQARHLDARGRYAVAEYLNIITYANFSGTNSPRCAMGERPHHSLKRALKIVE 239
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQ 298
FEE +L QNLF T + K+L+M+ D++ EL Q+N I WE
Sbjct: 240 PMFEEVILEDQNLFGTPKGVTKLLNMVHDDAARGELESYLQKNLEDGAHSRLI----WES 295
Query: 299 LKNTLQSGKQKVQG-----LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
S + L+ V E+ YPRLD+ V++ NHLLKAPFC+HP TG+
Sbjct: 296 FNKYASSMRTSTANAWSRKLKNIVSEVQLGLLYPRLDINVTRGFNHLLKAPFCIHPATGK 355
Query: 354 VCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSR 387
VC+P +FDPTTVPT+++LL E+N D +
Sbjct: 356 VCVPFSVSAVAKFDPTTVPTITQLLHEINAFDDK 389
>gi|367031936|ref|XP_003665251.1| hypothetical protein MYCTH_2315948 [Myceliophthora thermophila ATCC
42464]
gi|347012522|gb|AEO60006.1| hypothetical protein MYCTH_2315948 [Myceliophthora thermophila ATCC
42464]
Length = 517
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 246/423 (58%), Gaps = 35/423 (8%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L++YY R FP +F+W++ H F REFS L ND LR+QSF++
Sbjct: 97 LRIYYQRFFPWRYMFQWLN------HSPVPTKDFKHREFSLWLHNDAVLRYQSFSTSDLF 150
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ P +I+IGPVY+ DP R + + F P+ +EL FDID+TDYDD+R CC
Sbjct: 151 RKDVLRLMPRRIEIGPVYTADPRDRKTFRTA--SAFQPIAKELCFDIDLTDYDDIRTCCD 208
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A++C +CW M +AIKVIDTALR+DFG++HILWVYSGRRGVH WVCD +AR L ++ R
Sbjct: 209 MANICHKCWKFMIMAIKVIDTALREDFGYNHILWVYSGRRGVHAWVCDKQARTLEDKHRK 268
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
AIA Y V G + K+V+ PLHP L RS ++L++ F++ +L +Q+ + + ER E
Sbjct: 269 AIAAYLEVVTGKQG-GKRVNLRRPLHPHLSRS-IDILKDHFQKDVLETQDPWRSPERAEN 326
Query: 261 ILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
+L IPD + LR KW+ + R S+ DI+ L T S + L +
Sbjct: 327 LLQQIPDHQLREALRKKWESSPGRSSTARWADID-----ALAQTNASAALDPKELLDAKQ 381
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
+IV +TYPRLD VS+ NHLLK+PF +HP TGRVC+PID + + FDP VPTL L+
Sbjct: 382 DIVIEYTYPRLDTAVSQKLNHLLKSPFVIHPGTGRVCVPIDMNNLDGFDPLNVPTLQRLV 441
Query: 379 RELNT--------------GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMES 424
E++ + +WEKTSL I +FR SF+ L+ K+E E
Sbjct: 442 TEIDAWTEADGAAMGGSGGSSQEVKPVQDWEKTSLKPYIEYFR-SFVTALM---KDEREP 497
Query: 425 GYK 427
G K
Sbjct: 498 GVK 500
>gi|378732008|gb|EHY58467.1| DNA primase small subunit [Exophiala dermatitidis NIH/UT8656]
Length = 531
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 256/424 (60%), Gaps = 40/424 (9%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+PN ++ +Y RLFP +F+W+ N P D F REF+ TL ND YLR+QS+ +
Sbjct: 103 DPNLMRQFYSRLFPFRSLFQWL---NHSPKPGPD---FYNREFALTLSNDAYLRYQSYAT 156
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L I PS+ +IGPVY+ P R + +F P+ +E++FDID+TDYDD+R
Sbjct: 157 ADVLRKDILHHNPSRFEIGPVYTTAPRDRKTLRKS--TMFRPLSKEIVFDIDLTDYDDIR 214
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW T+AIKV+D ALR+DFGF+HI+W+YSGRRGVH WV D +AR L +
Sbjct: 215 TCCEKANICNKCWAFATMAIKVVDVALREDFGFEHIIWIYSGRRGVHAWVSDKEARELDD 274
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AI YF V KG K+V+ PLHP +VRS E+L+ +F + +L+ Q F ++
Sbjct: 275 DKRKAITGYFEVLKGGVQGGKRVNLRRPLHPHIVRSL-EILKPYFAQ-VLVDQEPFMSKA 332
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV---QGL 313
+++L ++PD+++ L KW ++S + + +W + + ++G K + L
Sbjct: 333 GQDRLLQLLPDKALNEALAKKW------ASSPDRPSHKKWADIDSVAETGVSKSLDKRAL 386
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI----DPKDCEEFDPT 369
+ ++IV +TYPRLD+EV K R HLLK+PF VHP TGRVC+PI D + FDP
Sbjct: 387 LQAKQDIVLEYTYPRLDVEVGKKRIHLLKSPFVVHPGTGRVCVPITAGGDMSRADSFDPL 446
Query: 370 TVPTLSELLRELN---------------TGDS-RMDVDNEWEKTSLGKSIRFFRSSFLQP 413
+VP ++ELLRE++ GD+ + N+WEKTSL + F S ++
Sbjct: 447 SVPKVNELLREVDQYGGAGAQDGGDQPANGDAVTVRKINDWEKTSLKPYVELF-DSHVRT 505
Query: 414 LLKS 417
LLKS
Sbjct: 506 LLKS 509
>gi|22037275|gb|AAM89973.1|AF403474_1 DNA primase catalytic subunit p48 [Moneuplotes crassus]
Length = 441
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/413 (41%), Positives = 248/413 (60%), Gaps = 16/413 (3%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSY------GNDGRHPACDKSYFGRREFSFTLDNDIYL 69
F+ LK Y+ LFP ++ W++Y +G+ P D YF RREFSFTL++ IY+
Sbjct: 15 FSIELLKKYFELLFPSKGMYDWLTYYQPEMKDTEGK-PKSD--YFYRREFSFTLEDGIYV 71
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R+ F +E E + ++ EK P KIDIG V+++ P K H+ + F P E+EL+FDID+
Sbjct: 72 RYNCFKNEEEFKQTLIEKSPEKIDIGAVFNM-PPKNHSSVES--RAFIPQEKELVFDIDM 128
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
TDYDDVR CC GA+VCL+CW M++A K+ID A+R+DFG+ H+LWV+SGRRGVHCWVCD
Sbjct: 129 TDYDDVRTCCEGANVCLKCWRFMSIATKIIDKAMREDFGYKHLLWVFSGRRGVHCWVCDP 188
Query: 190 KARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQ 249
R+LTNE R AIA+Y V+ GNE + HP + R+ ++++E F + ++ Q
Sbjct: 189 STRKLTNEARSAIANYLTVHVGNEMGSTTAKIDFVAHPAISRA-KDIIKEEFTDIMMRGQ 247
Query: 250 NLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQK 309
N+ S EE+ +K++ M+P+E V + L+ W + + + + + GK +
Sbjct: 248 NILSKEEQRKKLIEMLPEEEVRNHLKTNWDRYTDYEDQENSVKLWNIFTEIAGDKGGKLR 307
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPT 369
V + F YPR+D VSK NHLLK+PFCVHPKTG++C+P DP +EFDP
Sbjct: 308 KSYRTDYVTSAMITFLYPRIDANVSKGINHLLKSPFCVHPKTGKICVPFDPSKVDEFDPC 367
Query: 370 TVPTLSELLRELNTGDSRMDVDNEWEKT--SLGKSIRFFRSSFLQPLLKSCKE 420
PTL + E + S+ + E KT SL +S F S FL+ L K E
Sbjct: 368 NCPTLLNAMNEYDAMASKGEDPIESFKTVPSLRESFGVF-SKFLRGLKKEYTE 419
>gi|397565114|gb|EJK44484.1| hypothetical protein THAOC_36967 [Thalassiosira oceanica]
Length = 493
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 266/444 (59%), Gaps = 48/444 (10%)
Query: 6 PKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSY-------GNDGRHPACDKSY--FGR 56
P +V+ F+P L +YY RLFP+ ++ W+SY GN+ + + S F R
Sbjct: 46 PADASVV---FSPELLAMYYSRLFPYHMLYSWLSYDPATAKPGNNAKAGSSLGSACTFPR 102
Query: 57 REFSFTLD----NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGG 112
REFS T++ N++Y+R+QSF S+ EL +I+++ P KIDIG V++ P + G
Sbjct: 103 REFSMTIEPQPGNEVYIRYQSFLSQDELMEAIQKRRPVKIDIGAVFNYPPKDNKSLPSGK 162
Query: 113 DNVFAPVERELIFDIDITDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDH 171
EREL+FDID+TDYDDVR C CSGA +C +CW M +AIKV+D LR DFGF +
Sbjct: 163 ---LQTQERELVFDIDLTDYDDVRNCGCSGAKICGKCWKFMGMAIKVMDEGLRKDFGFKN 219
Query: 172 ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVR 231
+ W YSGRRGVHCWVCD AR+L+N+ R A+A YF V G+E NK P+HP L R
Sbjct: 220 LAWFYSGRRGVHCWVCDESARKLSNDARSAVASYFEVDLGSEK-NKNFHITSPVHPTLSR 278
Query: 232 SYTEVLREFFEEKLL-LSQNLFSTEERYEKILSMIPDE--SVTSELRGKWQENRRSSNSK 288
+Y + EF ++ L + S+ + + K+L+ +P+ SV +L KWQ + +S +
Sbjct: 279 AYRVLEPEFVKDVLPEEGHGIMSSRKMWTKLLTTLPESCMSVADKLDKKWQ--KENSTPR 336
Query: 289 EDINFFRWEQLKNTL-----QSGKQKVQ-----GLRRCVE----EIVFAFTYPRLDMEVS 334
E +W +LK + ++G K Q R +E E VF +TYPRLD+ VS
Sbjct: 337 E-----KWVELKKGIMTLIGKTGHAKAQKNLSNSERVKIEHWPMETVFRYTYPRLDINVS 391
Query: 335 KHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVD--- 391
K +NHLLK+PFCVHPKTGRVC+PI+ + FDP VPTL++L+ EL+ ++ D
Sbjct: 392 KMQNHLLKSPFCVHPKTGRVCVPIEVDSADCFDPFAVPTLAQLMTELDDYEAENGKDESI 451
Query: 392 NEWEKTSLGKSIRFFRSSFLQPLL 415
+W+KTSL F+ FL+PLL
Sbjct: 452 EDWQKTSLKGPFENFQKKFLKPLL 475
>gi|392589135|gb|EIW78466.1| prim-pol domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 405
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/394 (42%), Positives = 235/394 (59%), Gaps = 28/394 (7%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
P + +Y L+P +F W+ N G+ P F +REF+FTL D+YLR+ SF S
Sbjct: 10 TPEVMLAFYRLLYPFHSLFTWL---NQGQIPT---KLFTQREFAFTLAGDVYLRYHSFMS 63
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
EL+ + P++ +IGP+YS P R + F P+ REL+FDID+TDYD +R
Sbjct: 64 AEELKKQVLAFNPTRFEIGPMYSARPKDRKTVRP---SAFTPLLRELVFDIDMTDYDAIR 120
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CCS AD+C CW + A++V+DT LR+ FGF H+LWVYSGRRG+H W+ D A LT+
Sbjct: 121 TCCSSADICARCWAFIAAAVRVLDTTLREQFGFRHMLWVYSGRRGIHLWISDADALELTD 180
Query: 197 EQRGAIADYFRVYKGNENSNKKVSF----PGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
EQR A+ V +G ++ +KKV+ PL P L + E L + F E +L +Q+ F
Sbjct: 181 EQRRALVASLTVIEGGKDMHKKVNVRFTKQSPLPPALWGA-RETLNDRFGELILRNQDCF 239
Query: 253 STEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQG 312
+++E +E +L ++ D + LR +W ++ SS K W +L+ + K
Sbjct: 240 ASQEGWEALLRLVSDGGIAETLREEWTGSKISSIDK-------WLRLRELAKGSKSLTSA 292
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
+ E+I+ +TYPR+D EVSKHRNHLLKAPFCVHPKTGRVC+P+DP +EFDP VP
Sbjct: 293 V---FEDILLQYTYPRIDAEVSKHRNHLLKAPFCVHPKTGRVCVPVDPSRIDEFDPVKVP 349
Query: 373 TLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFF 406
T+ +LLRELN D W+KTSL + F
Sbjct: 350 TVGQLLRELNEAGEGAD----WQKTSLKPYVDLF 379
>gi|388582854|gb|EIM23157.1| DNA primase catalytic subunit [Wallemia sebi CBS 633.66]
Length = 416
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/401 (42%), Positives = 240/401 (59%), Gaps = 28/401 (6%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
D NP+ + YY RLFP FK M +G H F REF+FT+ +DIYLR+ S
Sbjct: 11 DASNPHVTRAYYERLFP----FKQMYQFYNGDH--IPTRLFTNREFAFTVKDDIYLRYLS 64
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F++ E + P++ +IG VY+ P + + G + F EREL+FDID+TDYD
Sbjct: 65 FSTWDEWKKETLRLNPTRFEIGAVYTARPRDKKSL---GPSAFKTKERELVFDIDMTDYD 121
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
++R C +G D+C +CW + A++++DT LR DFG+ H+LWV+SGRRG+HCWV D AR
Sbjct: 122 EIRTCAAGKDICEQCWGFVVAAMRILDTVLRQDFGYKHLLWVFSGRRGIHCWVSDPAARA 181
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFP------GPLHPFLVRSYTEVLREFFEEKLLL 247
LT+EQR A+ Y V +G+ KKV P HP L+R Y E L E FE+ +L
Sbjct: 182 LTDEQRKALVGYIEVVRGSAQQAKKVHISQNLPRGAPWHPSLMRGY-EQLYECFEKTVLE 240
Query: 248 SQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
Q+ F + + +LS++PD+ V L +W N+ NS+E +++Q++ +
Sbjct: 241 DQDAFRDDPAWRTLLSLLPDQDVAKSLSNEWV-NKPGLNSRE-----KFKQIRKRMPKSP 294
Query: 308 QKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFD 367
Q LR EIV + YPR+D EVSKH+NHLLKAPFC+HP TG+VC+P+D EEF+
Sbjct: 295 QWDTALR----EIVLQYVYPRIDTEVSKHQNHLLKAPFCIHPGTGKVCVPVDVSKAEEFN 350
Query: 368 PTTVPTLSELLRELNT--GDSRMDVDNEWEKTSLGKSIRFF 406
P+ VPT+ +LLREL + DV +WE+TSL IR
Sbjct: 351 PSKVPTIGQLLRELEQLPATAGRDVSQDWEQTSLAPYIRML 391
>gi|213410589|ref|XP_002176064.1| DNA primase small subunit [Schizosaccharomyces japonicus yFS275]
gi|212004111|gb|EEB09771.1| DNA primase small subunit [Schizosaccharomyces japonicus yFS275]
Length = 421
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/407 (44%), Positives = 251/407 (61%), Gaps = 29/407 (7%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY LFP +F+W+ N G P+ D F REF+FTL ND YLR+ SF + +L+
Sbjct: 35 YYKHLFPWKLLFQWL---NHGVIPSND---FTHREFAFTLQNDAYLRYLSFPTFDDLKKE 88
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ PS+ +IGPVYS +P R + F P+E+EL+FDID+TDYDDVR CCS A+
Sbjct: 89 AVQMTPSRFEIGPVYSANPRDRKTLKKAS---FKPLEKELVFDIDMTDYDDVRTCCSKAN 145
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
VC +CW MTVA+KV+DT R+DFGF+HILWVYSGRRG+H W+CD KAR+L + R IA
Sbjct: 146 VCPKCWLFMTVAMKVLDTTFREDFGFEHILWVYSGRRGIHAWICDEKARQLDDRGRRMIA 205
Query: 204 DYFRVYKGNENSNKKVS-FPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKIL 262
Y +V G+ +V+ PLHPF+ RS E+L E F + +L Q+ + +EE E++L
Sbjct: 206 GYLQVVVGDVQGGVRVNGLKRPLHPFISRSL-ELLSESFAQTILREQDPWRSEEGAERLL 264
Query: 263 SMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQKVQ---GLRRCVE 318
+PD+ + + LR KW + R S SK W + + +G K L+ +
Sbjct: 265 KALPDKGLVAALRKKWSVDLERPSISK-------WADIDSVASAGVSKTLDPVTLKNAKQ 317
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
+IV ++ YPRLD+EVSKH NHLLK+PFCVHP TGR+C+PI +D F+P VP L LL
Sbjct: 318 DIVLSYMYPRLDVEVSKHLNHLLKSPFCVHPGTGRICVPIRMEDAGSFNPLEVPVLQTLL 377
Query: 379 RELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESG 425
+EL D + DV EKTSL I FR Q L ++ +++ + G
Sbjct: 378 QEL---DEKGDV----EKTSLNSYISHFRGFCNQLLAETSRKKRKQG 417
>gi|392561742|gb|EIW54923.1| prim-pol domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 413
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 237/399 (59%), Gaps = 39/399 (9%)
Query: 23 VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELEN 82
+Y RL+P +F W++ H F REF+FTL D+YLR+ SF + EL+
Sbjct: 3 AFYRRLYPFKSLFTWLN------HEHAPSKLFTHREFAFTLQGDVYLRYNSFANAEELKK 56
Query: 83 SIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGA 142
+ P++ +IGPVYS P + F+P REL+FDID+TDYD +R CCSGA
Sbjct: 57 QVCSLNPTRFEIGPVYSARPRDKKTVRPAA---FSPQLRELVFDIDMTDYDPIRTCCSGA 113
Query: 143 DVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAI 202
D+C CW ++ A++V+D ALRD FG+ H+LWVYSGRRG+H W+ D +A LT++QR A+
Sbjct: 114 DICRRCWTYISAAVRVLDRALRDQFGYRHLLWVYSGRRGIHLWISDAEALALTDDQRRAL 173
Query: 203 ADYFRVYKGNENSNKKVSF---PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYE 259
+ V +G + +KKV+ PL P L S + L F + +L Q+ F++E+ +E
Sbjct: 174 VGWLTVIQGGKEMHKKVNVRVGAKPLPPSLA-SALKTLEPTFHDLVLADQDCFASEDGWE 232
Query: 260 KILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTL--------QSGKQKV 310
+L +IPD V ELR W+ + RSS +K W+ L++++ Q +
Sbjct: 233 ALLHLIPDREVVRELREHWEAHPDRSSEAK-------WQDLEDSIAQRRGKKDQRERNTF 285
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
L E+I+ +TYPRLD EVSKHRNHLLKAPFCVHPKTGRVC+P+DP+ + FDP
Sbjct: 286 AALTAAKEDIILQYTYPRLDAEVSKHRNHLLKAPFCVHPKTGRVCVPVDPRTIDRFDPAR 345
Query: 371 VPTLSELLRELNT----------GDSRMDVDNEWEKTSL 399
VPT+ +LLREL+ G + +WE+TSL
Sbjct: 346 VPTVGQLLRELDKAAPAPTAPAEGAGVAEHHADWERTSL 384
>gi|406697264|gb|EKD00529.1| DNA primase small subunit [Trichosporon asahii var. asahii CBS
8904]
Length = 438
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 243/421 (57%), Gaps = 39/421 (9%)
Query: 11 VIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLR 70
+ D + ++ +Y RLFP+ +++W++ G+ + REF+FT++ND+Y+R
Sbjct: 2 AVTDPSSREVMRAFYKRLFPYKAVYRWLNQGD------VPGKLWTHREFAFTIENDVYIR 55
Query: 71 FQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDIT 130
+QSF++ + + + PS+ +IGP YS P R G P REL+FDID+T
Sbjct: 56 YQSFSTAYDFQKEVLRLLPSRFEIGPQYSAKPRDRKTLPAGA---LQPERRELVFDIDMT 112
Query: 131 DYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGK 190
DYD++R CCS +C CW + A+KV+D ALR+ FGF H+LWVYSGRRG+HCW+ D
Sbjct: 113 DYDEIRTCCSDKAICARCWGFIAAAVKVLDKALRETFGFKHLLWVYSGRRGIHCWISDTL 172
Query: 191 ARRLTNEQRGAIADYFRVYKGNENSNKKVSFPG----PLHPFLVRSYTEVLREFFEEKLL 246
A LT++QR A+ + V KG + KKV+ G LHP L + + L+ F +L
Sbjct: 173 AMDLTDDQRRALTMFLEVIKGGKEQVKKVNVRGLGDADLHPSL-KEALQTLKYEFSRLIL 231
Query: 247 LSQNLFSTEERYEKILSMIP-DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTL-Q 304
Q F +E + +L ++P D V LR +W+ +S++ RWEQL + +
Sbjct: 232 EDQECFRSERGWHTLLELLPADREVKDALRAEWESQPDASSTT------RWEQLMAHMPR 285
Query: 305 SGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
G + + +E+++ +TYPR+D EVSKHRNHLLK+PFCVHP TGRVC+P+DP+
Sbjct: 286 KGTPAYRKYKNAIEDVILQYTYPRIDAEVSKHRNHLLKSPFCVHPGTGRVCVPVDPERAH 345
Query: 365 EFDPTTVPTLSELLRELNT--------GDSR---------MDVDNEWEKTSLGKSIRFFR 407
EFDP TVP++ +LLREL+T GD + +EWEKTSL +
Sbjct: 346 EFDPATVPSVGQLLRELDTAAEMKTEEGDGSGATGEVKPASKLASEWEKTSLKPYVEMLE 405
Query: 408 S 408
S
Sbjct: 406 S 406
>gi|195325981|ref|XP_002029709.1| GM25047 [Drosophila sechellia]
gi|194118652|gb|EDW40695.1| GM25047 [Drosophila sechellia]
Length = 438
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/437 (40%), Positives = 253/437 (57%), Gaps = 38/437 (8%)
Query: 5 GPKQGNVIPDGFNPNYLK----VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
P+Q +NP L+ VYY RLFPH ++W+SYG+ + + F RE S
Sbjct: 12 APQQQTTAVHAYNPEVLQDMLPVYYRRLFPHLPFYRWLSYGSS------EDAIFSNREIS 65
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTL +DIY+R+ F++++ELE I + P KIDIGPV P K H GG PV+
Sbjct: 66 FTLQDDIYIRYLCFDTQAELEKEICSRNPIKIDIGPVMHSKP-KNHRSIPGG---LTPVQ 121
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDID+TDYD+VR CCSGA VCL+CW M +A +V+D ALR+DFGF+HI+W++SGRR
Sbjct: 122 RELVFDIDMTDYDEVRTCCSGAGVCLKCWKFMVLAARVLDVALREDFGFEHIIWIFSGRR 181
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
G+HCWVCD +AR L R A+A+Y + Y N G ++ +++
Sbjct: 182 GIHCWVCDHQARHLDGRGRYAVAEYLNIITYASFAGGNSPRCSMGDRPHHSLKRALKIVE 241
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRR-SSNSKEDINFFRWE 297
FEE +L QNLF T + K+L+M+ D++ EL Q+N +NS+ WE
Sbjct: 242 PMFEEIVLEDQNLFGTPKGVTKLLNMVHDDAARGELESYLQKNLEDGANSR-----LVWE 296
Query: 298 QL---KNTLQSGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
N++++ + L+ V EI YPRLD+ V++ NHLLKAPFC+HP TG
Sbjct: 297 SFIKYANSMRTSTTSAWSRKLKNIVAEIQLGLLYPRLDINVTRGFNHLLKAPFCIHPATG 356
Query: 353 RVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSR----MDVD------NEWEKTSLGKS 402
+VC+P +FDPTTVPT+++LL E+N D + M+ + +KTS+ K
Sbjct: 357 KVCVPFSVSAVAKFDPTTVPTITQLLHEINAFDDKSKRYMEAPEDKSRIKDHKKTSMFKG 416
Query: 403 IRFFRSSFLQPLLKSCK 419
+ F FL+ L +S K
Sbjct: 417 VVVF-EEFLRKLERSQK 432
>gi|195588717|ref|XP_002084104.1| GD14084 [Drosophila simulans]
gi|194196113|gb|EDX09689.1| GD14084 [Drosophila simulans]
Length = 438
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 177/436 (40%), Positives = 250/436 (57%), Gaps = 36/436 (8%)
Query: 5 GPKQGNVIPDGFNPNYLK----VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
P+Q +NP L+ VYY RLFPH ++W+SYG+ + + F RE S
Sbjct: 12 APQQQTTAVHAYNPEVLQDMLPVYYRRLFPHLPFYRWLSYGSS------EDAIFSNREIS 65
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTL +DIY+R+ F++++ELE I + P KIDIGPV P K H GG PV+
Sbjct: 66 FTLQDDIYIRYLCFDTQAELEKEICSRNPIKIDIGPVMHSKP-KNHRSIPGG---LTPVQ 121
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDID+TDYD+VR CCSGA VCL+CW M +A +V+D ALR+DFGF+HI+W++SGRR
Sbjct: 122 RELVFDIDMTDYDEVRTCCSGAGVCLKCWKFMVLAARVLDVALREDFGFEHIIWIFSGRR 181
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
G+HCWVCD +AR L R A+A+Y + Y N G ++ +++
Sbjct: 182 GIHCWVCDHQARHLDGRGRYAVAEYLNIITYASFAGGNSPRCSMGDRPHHSLKRALKIVE 241
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQ 298
FEE +L QNLF T + K+L+M+ D++ EL Q+N + WE
Sbjct: 242 PMFEEIVLEDQNLFGTPKGVTKLLNMVHDDAARGELESYLQKNLEDGAHSRLV----WES 297
Query: 299 L---KNTLQSGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
N++++ + L+ V EI YPRLD+ V++ NHLLKAPFC+HP TG+
Sbjct: 298 FIKYANSMRTSTTSAWSRKLKNIVAEIQLGLLYPRLDINVTRGFNHLLKAPFCIHPATGK 357
Query: 354 VCIPIDPKDCEEFDPTTVPTLSELLRELNTGD----SRMDVD------NEWEKTSLGKSI 403
VC+P +FDPTTVPT+++LL E+N D S M+ + +KTS+ K +
Sbjct: 358 VCVPFSVSAVAKFDPTTVPTITQLLHEINAFDDKSKSYMEAPEDKSRIKDHKKTSMFKGV 417
Query: 404 RFFRSSFLQPLLKSCK 419
F FL+ L +S K
Sbjct: 418 VVFE-EFLRKLERSQK 432
>gi|409048157|gb|EKM57635.1| hypothetical protein PHACADRAFT_91098 [Phanerochaete carnosa
HHB-10118-sp]
Length = 419
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/413 (41%), Positives = 252/413 (61%), Gaps = 25/413 (6%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ +Y RL+P IF W++ H F REF+FTL D+YLR+QSF + EL
Sbjct: 1 MLTFYRRLYPFKSIFHWLN------HEHTPTKLFMNREFAFTLQGDVYLRYQSFTTADEL 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + P++ +IGP+Y+ P + G F PV REL+FDID+TDYD +R CCS
Sbjct: 55 KKQVCAMNPTRFEIGPMYTARPRDKKLARPGA---FQPVMRELVFDIDMTDYDSIRTCCS 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A +C CW + VA+KV+D ++R++FG+ ++LWVYSGRRG+H W+ D +A LT+EQR
Sbjct: 112 DASICSRCWAFIAVAVKVLDQSIRNNFGYKYLLWVYSGRRGIHLWISDREAMELTDEQRK 171
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLH--PFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
A+ + V +G ++ +KKV+ L P + EVL F + +L Q+ F +EE +
Sbjct: 172 ALVGWMTVIQGGKDQHKKVNLRLSLRQLPPSILDSLEVLVPAFTDIILDDQDCFRSEEGW 231
Query: 259 EKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQKVQGLR--- 314
++L +IP V S L KW+++ RSS+SK WE +KN +++ QK R
Sbjct: 232 RELLHLIPKNYVES-LEDKWEKDYDRSSHSK-------WEDVKNEIKTKTQKGSQPRLTG 283
Query: 315 -RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
+E+I+ +TYPR+D EVSKHRNHLLKAPFCVHPKTGRVC+P+DP ++F+P VPT
Sbjct: 284 TTAMEDIILQYTYPRIDAEVSKHRNHLLKAPFCVHPKTGRVCVPVDPSTIDDFNPERVPT 343
Query: 374 LSELLRELNTG-DSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESG 425
+ +LLREL+ D+ + ++WEKTSL + L+ + + + + E G
Sbjct: 344 VGQLLRELDQAKDTGDEHHSDWEKTSLKPYVEMLDKHALELMEEVRRVKRERG 396
>gi|24660826|ref|NP_523972.2| DNA polymerase alpha 50kD [Drosophila melanogaster]
gi|45645190|sp|Q24317.2|PRI1_DROME RecName: Full=DNA primase small subunit; AltName: Full=DNA
polymerase subunit A; AltName: Full=DNA primase 50 kDa
subunit; Short=dPRI50
gi|7295113|gb|AAF50439.1| DNA polymerase alpha 50kD [Drosophila melanogaster]
gi|17945575|gb|AAL48839.1| RE26079p [Drosophila melanogaster]
Length = 438
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/436 (40%), Positives = 250/436 (57%), Gaps = 36/436 (8%)
Query: 5 GPKQGNVIPDGFNPNYLK----VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
P+Q +NP L+ VYY RLFPH ++W+SYG+ + + F RE S
Sbjct: 12 APQQQTTAVHAYNPEVLQDMLPVYYRRLFPHLPFYRWLSYGSS------EDAIFSNREIS 65
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTL +DIY+R+ F++++ELE I + P KIDIGPV P K H GG PV+
Sbjct: 66 FTLQDDIYIRYLCFDTQAELEKEICSRNPIKIDIGPVMHSKP-KNHRSIPGG---LTPVQ 121
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDID+TDYD+VR CCSGA VCL+CW M +A +V+D ALR+DFGF+HI+W++SGRR
Sbjct: 122 RELVFDIDMTDYDEVRTCCSGAGVCLKCWKFMVLAARVLDVALREDFGFEHIIWIFSGRR 181
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
G+HCWVCD +AR L R A+A+Y + Y N G ++ +++
Sbjct: 182 GIHCWVCDYQARHLDGRGRYAVAEYLNIITYASFAGGNSPRCSMGDRPHHSLKRALKIVE 241
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQ 298
FEE +L QNLF T + K+L+M+ D++ EL Q+N + WE
Sbjct: 242 PMFEEIVLEDQNLFGTPKGVTKLLNMVHDDAARGELESYMQKNLEDGAHSRLV----WES 297
Query: 299 L---KNTLQSGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
N++++ + L+ V EI YPRLD+ V++ NHLLKAPFC+HP TG+
Sbjct: 298 FIKYANSMRTSTTSAWSRKLKNIVAEIQLGLLYPRLDINVTRGFNHLLKAPFCIHPATGK 357
Query: 354 VCIPIDPKDCEEFDPTTVPTLSELLRELNTGD----SRMDVD------NEWEKTSLGKSI 403
VC+P +FDPTTVPT+++LL E+N D S M+ + +KTS+ K +
Sbjct: 358 VCVPFSVSAVAKFDPTTVPTITQLLHEINAFDDKSKSYMEAPEDKSRIKDHKKTSMFKGV 417
Query: 404 RFFRSSFLQPLLKSCK 419
F FL+ L +S K
Sbjct: 418 VVF-EEFLRKLERSQK 432
>gi|219127025|ref|XP_002183745.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404982|gb|EEC44927.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 458
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/437 (41%), Positives = 248/437 (56%), Gaps = 60/437 (13%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD----NDIYLRF 71
++P L VYY RLFP++ + W+SYG D + F REFSFT++ +IYLR+
Sbjct: 42 YSPELLSVYYARLFPYSLLHTWLSYGTR------DPTVFAHREFSFTIEPVPGEEIYLRY 95
Query: 72 QSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
QSF +ESEL +++++ P+KIDIG V+S P R PV+REL+FDID+TD
Sbjct: 96 QSFRNESELAAAVRQRRPTKIDIGAVFSHAPRDRAVVP-----TLRPVQRELVFDIDLTD 150
Query: 132 YDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGK 190
YDDVR C C+GA +C CW M A+ V+DT LRDDFGF H+ WVYSGRRG+H WVCD
Sbjct: 151 YDDVRACGCTGARICPVCWGFMRTAVAVMDTVLRDDFGFGHVAWVYSGRRGIHAWVCDPA 210
Query: 191 ARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQ- 249
AR LT+ R A+A Y + G++ N++V PLHP + R+ +VL +F E +L +Q
Sbjct: 211 ARELTDAARAAVASYCEIQLGSDQ-NQQVVLTHPLHPAIQRAL-QVLEPWFVEHVLPAQG 268
Query: 250 -NLFSTEERYEKILSMIPDESVT--SELRGKWQENRRSSNSKEDINFFRWEQLKNTLQ-- 304
L +T + L IPD + T + L+ W + K W +++ Q
Sbjct: 269 HGLLATPAACDAFLQTIPDAAATVRAHLQTSWATRTHAPAEK-------WREVRTHFQIF 321
Query: 305 ---SGKQKVQGLRRCVEE---------IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
S KV+ E +V ++YPRLD+ VSK RNHLLK+PFCVHPKTG
Sbjct: 322 LEKSATAKVRKTMSLPERERLETWTAGVVLRYSYPRLDINVSKMRNHLLKSPFCVHPKTG 381
Query: 353 RVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSR---------------MDVDNEWEKT 397
RVC+PI D E FDP VPTL +L+REL+ S +W+KT
Sbjct: 382 RVCVPI--ADFETFDPFAVPTLPQLVRELDEYHSTNASTSTPTSDSTTHPPTAGPDWQKT 439
Query: 398 SLGKSIRFFRSSFLQPL 414
SL + F+ +FL+PL
Sbjct: 440 SLRAYLEPFQRNFLEPL 456
>gi|340966635|gb|EGS22142.1| DNA primase-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 537
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 183/438 (41%), Positives = 252/438 (57%), Gaps = 37/438 (8%)
Query: 5 GPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD 64
P G VI + L+ +Y R FP +F+W++ H + F REFS L
Sbjct: 103 SPDSGPVI----STELLRTFYQRFFPWRYMFQWLN------HSPTPTNDFKHREFSLWLP 152
Query: 65 NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELI 124
N+ LR+QS+ S E + P++I+IGPVY+ +P R + VF P+ +EL
Sbjct: 153 NEAVLRYQSYTSADEFRAEVLRVMPARIEIGPVYTANPKDRKLFRNS--TVFRPLAKELC 210
Query: 125 FDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHC 184
FDID+TDYDD+R CC A +C++CW +T+AIKV+DTALRDDFGF HILWVYSGRRG H
Sbjct: 211 FDIDLTDYDDIRTCCDKAKICIKCWQFITMAIKVLDTALRDDFGFKHILWVYSGRRGAHA 270
Query: 185 WVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEK 244
WVCD +AR L +EQR AI YF V G + S K+V+ PLHP L RS ++L++ F+
Sbjct: 271 WVCDKQARILNDEQRKAITGYFEVLTGGQQSGKRVNLRRPLHPHLSRSL-DILKDHFQHD 329
Query: 245 LLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNT 302
+L Q+ +S ++ +L+ IPD S+ LR KW + R S+ DI+ L +
Sbjct: 330 VLEKQDPWSDSDKASVLLNQIPDPSLREALRRKWDSSPGRPSALKWADID-----ALAQS 384
Query: 303 LQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKD 362
S + L ++IV TYPRLD+ V++ NHLLK+PF VHP TGR+C+PID +
Sbjct: 385 SASSSLDAKDLLDAKQDIVLEHTYPRLDVGVTQKLNHLLKSPFVVHPGTGRICVPIDTRT 444
Query: 363 ---CEEFDPTTVPTLSELLRELNT----------GDSRMDVDNEWEKTSLGKSIRFFRSS 409
E FDP VPTL +++RE++ GD +WEKTSL I +FR
Sbjct: 445 QAAFEAFDPLAVPTLPQIVREVDAWEKQQATAANGDGEGRRLQDWEKTSLKPYIEYFRWF 504
Query: 410 FLQPLLKSCKEEMESGYK 427
+L K+E ESG K
Sbjct: 505 ----VLGLMKDERESGIK 518
>gi|212546425|ref|XP_002153366.1| DNA primase subunit Pri1, putative [Talaromyces marneffei ATCC
18224]
gi|210064886|gb|EEA18981.1| DNA primase subunit Pri1, putative [Talaromyces marneffei ATCC
18224]
Length = 506
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 250/418 (59%), Gaps = 35/418 (8%)
Query: 15 GFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSF 74
G + + +Y RLFP +F+W+ N G P+ D REF+ L N+ LR+QSF
Sbjct: 84 GIDAEVMLAFYQRLFPFRPMFQWL---NHGVVPSPD---MINREFAVFLQNEAVLRYQSF 137
Query: 75 NSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDD 134
+ I P++ +IGPVYS +P R N PV +EL+FDID+TDYDD
Sbjct: 138 ATADLFRKEILRLNPTRFEIGPVYSTNPRDRKNRPGTKMN---PVAKELVFDIDMTDYDD 194
Query: 135 VRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRL 194
VR CCS A++C +CW +T+AIKV+DTALR+DFGF+HILWVYSGRRG H WV D +AR L
Sbjct: 195 VRTCCSKANICHKCWSFITMAIKVVDTALREDFGFEHILWVYSGRRGAHAWVGDHRARNL 254
Query: 195 TNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
+++R AIA Y + KGN+ S K+V+ PLHP + RS ++L F + L+ Q++F
Sbjct: 255 PDDRRKAIAGYLELVKGNDKSGKRVNVKRPLHPHVARS-VKLLEPHFNQTTLIDQDVFLG 313
Query: 255 EERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQG 312
E++ E++L ++PD+ + LR KW +R S+N DI L T+ +
Sbjct: 314 EQQAERLLGLLPDKKLNDALRRKWDSTPDRSSTNKWNDI-----VTLAKTING--IDARA 366
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L+ +IV +TYPRLD EVSK HLLK+PF +HP TGRVC+P+D ++ EEFDP VP
Sbjct: 367 LKDARYDIVLEYTYPRLDAEVSKKMIHLLKSPFVIHPGTGRVCVPMDGRNIEEFDPLAVP 426
Query: 373 TLSELLRE--------------LNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK 416
T++ELL E L TG S + ++EKT L + +FR SF+ L+K
Sbjct: 427 TVTELLAEIDEYDKENPPSASNLETGPSDRKM-QDYEKTRLKPYVDYFR-SFVANLIK 482
>gi|332206764|ref|XP_003252464.1| PREDICTED: DNA primase small subunit [Nomascus leucogenys]
Length = 392
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 247/391 (63%), Gaps = 30/391 (7%)
Query: 48 ACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHA 107
A K+YF REFSFTL +DIY+R+QSFN++S+LE +++ P KIDIG VYS P + +
Sbjct: 6 AVIKNYFQHREFSFTLKDDIYIRYQSFNNQSDLEKEMQKMNPYKIDIGAVYSHRPNQHNT 65
Query: 108 YAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDF 167
G F E+EL+FDID+TDYDDVR CCS AD+C +CW LM +AI++ID AL++DF
Sbjct: 66 VKLGA---FQAQEKELVFDIDMTDYDDVRRCCSSADICPKCWTLMIMAIRIIDRALKEDF 122
Query: 168 GFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHP 227
GF H LWVYSGRRGVHCWVCD R+L++ R I +Y + KG + KKV +HP
Sbjct: 123 GFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRSGIVEYLSLVKGGQEVKKKVHLSEKIHP 182
Query: 228 FLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNS 287
F +R +++++FEE L++Q++ +E ++KIL+++P E++ EL+ +Q++ S
Sbjct: 183 F-IRKSINIIKKYFEEYALVNQDILENKESWDKILALVP-ETIHDELQQNFQKSHSSLQ- 239
Query: 288 KEDINFFRWEQLKNTLQSGKQKVQGLRR---CVEEIVFAFTYPRLDMEVSKHRNHLLKAP 344
RWE LK + ++ + EI+ + +PRLD+ VSK NHLLK+P
Sbjct: 240 -------RWEHLKKVASRCQNNIKNDKYGPWLEWEIMLQYCFPRLDINVSKGINHLLKSP 292
Query: 345 FCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRM----------DVDN-- 392
F VHPKTGR+ +PID + ++FDP TVPT+S + REL+ + DV +
Sbjct: 293 FSVHPKTGRISVPIDLQKVDQFDPFTVPTISFICRELDAISTNEEEEVENEAESDVKHRT 352
Query: 393 -EWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
+++KTSL ++ F FL+ L KS K E+
Sbjct: 353 RDYKKTSLAPYVKVF-EHFLENLDKSRKGEL 382
>gi|194749491|ref|XP_001957172.1| GF10290 [Drosophila ananassae]
gi|190624454|gb|EDV39978.1| GF10290 [Drosophila ananassae]
Length = 438
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/432 (40%), Positives = 247/432 (57%), Gaps = 30/432 (6%)
Query: 6 PKQGNVIPDGFNPNYLK----VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSF 61
P Q FNP L+ +YY RLFPH ++W+SYG + F RE SF
Sbjct: 13 PPQPTAAVPAFNPEILQDMLPLYYRRLFPHQPFYRWLSYG------LTEDGIFCNREISF 66
Query: 62 TLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVER 121
TL +DIY+R+ F+S++ELE + + P KIDIGPV P K H GG PV+R
Sbjct: 67 TLMDDIYIRYLCFDSQAELEKELCSRNPVKIDIGPVMHTRP-KMHRTIPGG---LVPVQR 122
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
EL+FDID+TDYDDVR CCSGA+VCL+CW M +A +++D ALR+DFGF+HILWV+SGRRG
Sbjct: 123 ELVFDIDMTDYDDVRTCCSGAEVCLKCWKFMVLAARILDVALREDFGFEHILWVFSGRRG 182
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLRE 239
+HCWVCD +AR L R ++A+Y + Y SN G ++ +++
Sbjct: 183 IHCWVCDHQARHLDGRGRYSVAEYLNIVSYVSFGGSNSPRVPLGDRQHHSIKRALKIVEP 242
Query: 240 FFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDI--NFFRWE 297
FEE ++ QNLF T + K+L+MI DE E Q+N + +F ++
Sbjct: 243 MFEEVIIEDQNLFGTPKGVTKLLNMIHDEGARGEFESYLQKNLEDGAHSRQVWESFLKYS 302
Query: 298 QLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIP 357
T + + L+ V+E+ YPRLD+ V++ NHLLK+PFC+HP TG+VC+P
Sbjct: 303 NSMRTTTANAWS-RKLKNIVQEVQLGLLYPRLDINVTRGFNHLLKSPFCIHPSTGKVCVP 361
Query: 358 IDPKDCEEFDPTTVPTLSELLRELNTGD----SRMDVD------NEWEKTSLGKSIRFFR 407
+FDPTTVPT+++LL E+N D S M+ + +KTS+ K + F
Sbjct: 362 FSVSAVGKFDPTTVPTITQLLHEINAFDDKNKSYMEAPEDKSRIKDHKKTSMFKGVVVF- 420
Query: 408 SSFLQPLLKSCK 419
FL+ L +S K
Sbjct: 421 EEFLRKLERSLK 432
>gi|195016209|ref|XP_001984363.1| GH15058 [Drosophila grimshawi]
gi|193897845|gb|EDV96711.1| GH15058 [Drosophila grimshawi]
Length = 434
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 245/419 (58%), Gaps = 32/419 (7%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L VYY RLFPH ++W++YG+ + + F RE SFTL +DIY+R+ F ++
Sbjct: 29 PDMLPVYYRRLFPHEPFYRWLNYGHS------EDNIFVNREISFTLHDDIYIRYLCFETQ 82
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ELE I P KIDIG V S P A G PV+REL+FDID TDYDD+R
Sbjct: 83 AELEKEICSSNPYKIDIGAVLSTRPKNFRTVAGG----LTPVQRELVFDIDATDYDDIRN 138
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGA++CL+CW M +A +V+D ALR+DF F+H+LW++SGRRG+HCWVCD AR L
Sbjct: 139 CCSGAEMCLKCWKFMVLAARVLDAALREDFDFEHMLWIFSGRRGIHCWVCDHTARHLDAR 198
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R A+ +Y + N+ +V H L R+ +++ FEE +L QNLF T +
Sbjct: 199 ARAAVTEYLNILSYTNNA-ARVQIGDRTHHSLRRAL-KIVEPMFEEIVLEDQNLFGTPKG 256
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWE---QLKNTLQSGKQKV--QG 312
K+L M+ DE +EL Q+ + I WE + N++++ V +
Sbjct: 257 INKLLQMVSDEGARNELEAYLQKTHEDGAHSKLI----WESFVRFANSMRTSAANVWSRK 312
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L+ V+E+ YPRLD+ V+K NHLLKAPFC+HP TG++CIP +FDP TVP
Sbjct: 313 LKHIVQEVQLCLLYPRLDINVTKGFNHLLKAPFCIHPATGKICIPFSISAVAKFDPITVP 372
Query: 373 TLSELLRELNTGD----SRMDVD------NEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
T+S+LL+E+N D S MD +++KTS+ K + F FL+ L ++ K +
Sbjct: 373 TISQLLQEINAYDDKTKSYMDAPEDKSRIKDYKKTSMFKGVVVF-EEFLRKLERNFKSQ 430
>gi|452840307|gb|EME42245.1| hypothetical protein DOTSEDRAFT_73165 [Dothistroma septosporum
NZE10]
Length = 466
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 243/399 (60%), Gaps = 28/399 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L+ +Y RL P +F+W++ H A + F REFSF L + +R+ SF S L
Sbjct: 60 LRQFYQRLCPFRQLFQWLN------HSATPQPDFQNREFSFWLPGNRVIRYLSFPSADLL 113
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + CP + +IGP Y+++P R + + F PV +EL+FDID+TDYD +R CC
Sbjct: 114 RKQVVQMCPERFEIGPQYTINPRDRKTLKKA--SAFRPVMKELVFDIDMTDYDPIRTCCQ 171
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G +C +CW + +AIKV+DTALR+DFGF HI+WVYSGRRG H W+ D +AR L + +R
Sbjct: 172 GTKICNKCWQFIVMAIKVVDTALREDFGFQHIMWVYSGRRGAHAWISDKRARELDDSKRK 231
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
AIA+Y V +GNEN K+V PLHP + RS ++L +F+ +L Q+ + + E+ EK
Sbjct: 232 AIANYLEVLRGNEN-GKRVGLRRPLHPHVDRSL-KLLTPYFQNDVLAEQDPWQSAEQAEK 289
Query: 261 ILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV--- 317
+L++IPD+S+ L+ KW + ++S+ +W + ++G R+ V
Sbjct: 290 LLNLIPDKSLADALKKKWDVSADRTSSQ------KWADIDALAEAGSLSTLNPRQLVDVK 343
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
++I +TYPRLD EVSK NHLLK+PF VHP TGRVC+PID + E+FDP VPT+++L
Sbjct: 344 QDIRLEYTYPRLDAEVSKKLNHLLKSPFVVHPGTGRVCVPIDIRSVEDFDPFEVPTVTQL 403
Query: 378 LRELNTGDSRMDVD---------NEWEKTSLGKSIRFFR 407
L E++ +++ +W+KTSL + +FR
Sbjct: 404 LDEIDQWETKQGAGMSEEDKAKVQDWQKTSLKPYVEYFR 442
>gi|440475158|gb|ELQ43859.1| DNA primase small subunit [Magnaporthe oryzae Y34]
gi|440487087|gb|ELQ66893.1| DNA primase small subunit [Magnaporthe oryzae P131]
Length = 507
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/419 (42%), Positives = 247/419 (58%), Gaps = 37/419 (8%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P ++ +Y RLFP +F+W+ N +P D F REF+FTL ND YLR+QSF +
Sbjct: 112 DPEVMRSFYQRLFPWRYLFQWL---NHSPNPTND---FAHREFAFTLQNDAYLRYQSFTT 165
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + PS+ +IGPVY+ +P +R + F P+ +EL FDID+TDYDD+R
Sbjct: 166 SDLLRKDVLRLMPSRFEIGPVYNTNPRERKTLRNS--SAFKPLAKELCFDIDLTDYDDIR 223
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW MT+AIK +D ALRDDFGF HI+WVYSGRRG H WVCD KAR + +
Sbjct: 224 TCCDKANICNKCWQFMTMAIKTVDVALRDDFGFKHIMWVYSGRRGAHAWVCDKKARVMDD 283
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
++R AIA Y V +G S KKV+ PLHP L RS +VL+ F+E +L +Q+ + +EE
Sbjct: 284 QKRRAIAGYLEVVRGGAQSGKKVNVRRPLHPHLSRSL-DVLKGHFQEDVLRAQDPWESEE 342
Query: 257 RYEKILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQG 312
+ EK+L ++PD ++ LR KW + RSS SK W + ++G + +
Sbjct: 343 QAEKLLQLLPDRTLNDSLRKKWASSPGRSSLSK-------WADIDTVAKTGASRNLDAKA 395
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
L ++IV +TYPRLD+EVSK NHLLK+PF VHP TGR + EE D P
Sbjct: 396 LLEAKQDIVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRELL-------EEIDAWKQP 448
Query: 373 TLSELLRELNTGDSRMDVDNEWEKTSLGKSI---RFFRSSFLQ----PLLKSCKEEMES 424
E+ +E + +WEKTSL I R F S+ ++ P +K +EE ES
Sbjct: 449 ---EVKKEQGDDAAAQRPMQDWEKTSLKPHIDQFRVFVSALMKDERDPKIKREREEAES 504
>gi|125980129|ref|XP_001354097.1| GA20108 [Drosophila pseudoobscura pseudoobscura]
gi|54641085|gb|EAL29836.1| GA20108 [Drosophila pseudoobscura pseudoobscura]
Length = 438
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 178/434 (41%), Positives = 247/434 (56%), Gaps = 37/434 (8%)
Query: 8 QGNVIPDGFNP----NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTL 63
Q V+P F+P + L VYY RLFPH ++W+SYG + F RE SFTL
Sbjct: 14 QQTVVP-AFDPTILPDMLPVYYRRLFPHLPFYRWLSYG------LSEDGVFCNREISFTL 66
Query: 64 DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVEREL 123
+DIY+R+ F +++ELE I + P KIDIGPV P G PV+REL
Sbjct: 67 HDDIYIRYLCFETQAELEKEICSRNPYKIDIGPVMHTRPTNFRIVPGG----LTPVQREL 122
Query: 124 IFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
+FDID+TDYD+VR CCSGA+VCL+CW M +A +V+D ALR+DFGF+HILWV+SGRRG+H
Sbjct: 123 VFDIDMTDYDEVRTCCSGAEVCLKCWKFMVLAARVLDLALREDFGFEHILWVFSGRRGIH 182
Query: 184 CWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
CWVCD +AR L R A+A+YF + Y SN G + +++ F
Sbjct: 183 CWVCDHQARHLDGRGRYAVAEYFNIVSYVNFMGSNSPRCQLGDRSHHSFKRALKIIEPLF 242
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL-- 299
EE ++ QNLF T + K+L MI D+ +E G Q++ I WE
Sbjct: 243 EEIIIEDQNLFGTPKGVNKLLHMIHDDGARTEFEGYLQKSHEDGAHSRLI----WESFIK 298
Query: 300 -KNTLQSGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCI 356
N++++ V + L+ V+E+ YPRLD+ V++ NHLLK+PFC+HP TG+VC+
Sbjct: 299 YSNSMRTSTANVWSRKLKNIVQEVQLCLLYPRLDINVTRGFNHLLKSPFCIHPATGKVCV 358
Query: 357 PIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNE----------WEKTSLGKSIRFF 406
P +FDPTTVPT+++LL E+N D + E +KTS+ K + F
Sbjct: 359 PFSVNAVAKFDPTTVPTITQLLHEINAYDDKTKSYMEAPEDKSRIKDHKKTSMFKGVVVF 418
Query: 407 RSSFLQPLLKSCKE 420
FL+ L +S KE
Sbjct: 419 -EEFLRKLERSNKE 431
>gi|367047845|ref|XP_003654302.1| hypothetical protein THITE_2117187 [Thielavia terrestris NRRL 8126]
gi|347001565|gb|AEO67966.1| hypothetical protein THITE_2117187 [Thielavia terrestris NRRL 8126]
Length = 555
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/439 (40%), Positives = 247/439 (56%), Gaps = 45/439 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L+ YY R FP +F+W++ H + F REFS L ND +R+QS+ +
Sbjct: 130 LRTYYQRCFPWRYMFQWLN------HSPVPTNDFKHREFSLWLHNDAVMRYQSYMTSDLF 183
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ P +I+IGPVY+ DP + F + +EL FDID+TDYDD+R CC
Sbjct: 184 RKDVLRLMPRRIEIGPVYTADPRDHKTFRNS--TAFQALAKELCFDIDLTDYDDIRTCCD 241
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A++C +CW +T+AIKV++ ALR+DFGF HILWV+SGRRGVH WVCD KAR L ++QR
Sbjct: 242 KANICHKCWRFITMAIKVLEAALREDFGFQHILWVFSGRRGVHAWVCDKKARTLDDQQRK 301
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
AI Y V G KKV+ PLHP L RS ++L++ F++ +L Q+ + T E+ E
Sbjct: 302 AITGYLEVVTGGTQGGKKVNLRRPLHPHLSRSL-DLLKDHFQQDVLEVQDPWRTAEKAEA 360
Query: 261 ILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQKV----QGLRR 315
+L IPD S+ + LR KW+ + RSS +K W + QSG + L
Sbjct: 361 LLQQIPDPSLRAALRSKWEASPGRSSAAK-------WADIDALAQSGASSAALDPRDLLD 413
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
+++V TYPRLD +V++ HLLK+PF VHP TGRVC+PID + FDP VPTL
Sbjct: 414 AKQDVVLEHTYPRLDAKVTQQLKHLLKSPFVVHPGTGRVCVPIDRARLDAFDPLAVPTLQ 473
Query: 376 ELLRELN---------------TGDSRMDVD--NEWEKTSLGKSIRFFRSSFLQPLLKSC 418
+L+RE++ +DV +WEKTSL I +FR SF+ L+K
Sbjct: 474 DLVREIDAWGGGGGGGGAEGVMADGGGLDVKPVQDWEKTSLKPYIEYFR-SFVTALMKDE 532
Query: 419 KEEM------ESGYKAKIQ 431
KE E G + K++
Sbjct: 533 KEAAVKREREEEGVQVKVE 551
>gi|260819706|ref|XP_002605177.1| hypothetical protein BRAFLDRAFT_58959 [Branchiostoma floridae]
gi|229290508|gb|EEN61187.1| hypothetical protein BRAFLDRAFT_58959 [Branchiostoma floridae]
Length = 372
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 166/362 (45%), Positives = 216/362 (59%), Gaps = 63/362 (17%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P L +YY RLFP+ +KW+SYG KSYF REFSFTL +DIY+R+QSF+ +
Sbjct: 22 PELLPIYYKRLFPYGPYYKWLSYG------GVKKSYFHNREFSFTLKDDIYIRYQSFSDQ 75
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SE+E I+ P KIDIG V+S P K H + G F E+EL+FDID+TDYDDVR
Sbjct: 76 SEMEKEIQRVMPYKIDIGAVFSHKP-KDHKTVKPG--AFQAQEKELVFDIDMTDYDDVRN 132
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGA++C +CWPLM +AIK++D ALRDDFGFDH LWVYSGRRGVHCWVCD R+L+
Sbjct: 133 CCSGANICEKCWPLMVIAIKIVDRALRDDFGFDHRLWVYSGRRGVHCWVCDESTRQLSQT 192
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R AIA+Y V KG E+ KKV+ P+HP L + + R ++ L Q++ TE+R
Sbjct: 193 ARTAIAEYLSVVKGGESQTKKVTLRDPMHPSLKEALKTMSRH-VDQYLFQQQDILGTEDR 251
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC- 316
+K +++C
Sbjct: 252 LKK--------------------------------------------------DNMKKCP 261
Query: 317 --VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
+ E++F + YPRLD+ VSK NHLLK+PFC+HPKTGRVC+PID +D + FDP VPT+
Sbjct: 262 YPLVEVMFQYCYPRLDVNVSKGVNHLLKSPFCIHPKTGRVCVPIDVEDVDNFDPFAVPTI 321
Query: 375 SE 376
E
Sbjct: 322 RE 323
>gi|195171010|ref|XP_002026304.1| GL24698 [Drosophila persimilis]
gi|194111199|gb|EDW33242.1| GL24698 [Drosophila persimilis]
Length = 438
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 178/434 (41%), Positives = 247/434 (56%), Gaps = 37/434 (8%)
Query: 8 QGNVIPDGFNP----NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTL 63
Q V+P F+P + L VYY RLFPH ++W+SYG + F RE SFTL
Sbjct: 14 QQTVVP-AFDPTILPDMLPVYYRRLFPHQPFYRWLSYG------LSEDGVFCNREISFTL 66
Query: 64 DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVEREL 123
+DIY+R+ F +++ELE I + P KIDIGPV P G PV+REL
Sbjct: 67 HDDIYIRYLCFETQAELEKEICSRNPYKIDIGPVMHTRPTNFRIVPGG----LTPVQREL 122
Query: 124 IFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
+FDID+TDYD+VR CCSGA+VCL+CW M +A +V+D ALR+DFGF+HILWV+SGRRG+H
Sbjct: 123 VFDIDMTDYDEVRTCCSGAEVCLKCWKFMVLAARVLDLALREDFGFEHILWVFSGRRGIH 182
Query: 184 CWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
CWVCD +AR L R A+A+YF + Y SN G + +++ F
Sbjct: 183 CWVCDHQARHLDGRGRYAVAEYFNIVSYVNFMGSNSPRCQLGDRSHHSFKRALKIIEPLF 242
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL-- 299
EE ++ QNLF T + K+L MI D+ +E G Q++ I WE
Sbjct: 243 EEIIIEDQNLFGTPKGVNKLLHMIHDDGARTEFEGYLQKSHEDGAHSRLI----WESFIK 298
Query: 300 -KNTLQSGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCI 356
N++++ V + L+ V+E+ YPRLD+ V++ NHLLK+PFC+HP TG+VC+
Sbjct: 299 YSNSMRTSTANVWSRKLKNIVQEVQLCLLYPRLDINVTRGFNHLLKSPFCIHPATGKVCV 358
Query: 357 PIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNE----------WEKTSLGKSIRFF 406
P +FDPTTVPT+++LL E+N D + E +KTS+ K + F
Sbjct: 359 PFSVNAVAKFDPTTVPTITQLLHEINAYDDKTKSYMEAPEDKSRIKDHKKTSMFKGVVVF 418
Query: 407 RSSFLQPLLKSCKE 420
FL+ L +S KE
Sbjct: 419 -EEFLRKLERSNKE 431
>gi|666989|emb|CAA56196.1| DNA polymerase subunit A [Drosophila melanogaster]
Length = 438
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/436 (40%), Positives = 248/436 (56%), Gaps = 36/436 (8%)
Query: 5 GPKQGNVIPDGFNPNYLK----VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFS 60
P+Q +NP L+ VYY RLFPH ++W+SYG+ + + F RE S
Sbjct: 12 APQQQTTAVHAYNPEVLQDMLPVYYRRLFPHLPFYRWLSYGSS------EDAIFSNREIS 65
Query: 61 FTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
FTL +DIY+R+ F++++ELE I + P KIDIGPV P K H GG PV+
Sbjct: 66 FTLQDDIYIRYLCFDTQAELEKEICSRNPIKIDIGPVMHSKP-KNHRSIPGG---LTPVQ 121
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDID+TDYD+VR CCSGA VCL+CW M +A +V+D AL +DFGF+HI+W++SGRR
Sbjct: 122 RELVFDIDMTDYDEVRTCCSGAGVCLKCWKFMVLAARVLDVALAEDFGFEHIIWIFSGRR 181
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
G+HCWVCD +AR L R A A+Y + Y N G ++ +++
Sbjct: 182 GIHCWVCDYQARHLDGRGRYAEAEYLNIITYASFAGGNSPRCSMGDRPHHSIKRALKIVE 241
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQ 298
FEE +L QNLF T + K+L+M+ D++ EL Q+N + WE
Sbjct: 242 PMFEEIVLEDQNLFGTPKGVTKLLNMVHDDAARGELESYMQKNLEDGAHSRLV----WES 297
Query: 299 L---KNTLQSGKQKV--QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
N++++ + L+ V EI YPRLD+ V++ NHLLKAPFC+HP TG+
Sbjct: 298 FIKYANSMRTSTTSAWSRKLKNIVAEIQLGLLYPRLDINVTRGFNHLLKAPFCIHPATGK 357
Query: 354 VCIPIDPKDCEEFDPTTVPTLSELLRELNTGD----SRMDVD------NEWEKTSLGKSI 403
VC+P +FDPTTVPT+++LL E+N D S M+ + +KTS+ K +
Sbjct: 358 VCVPFSVSAVAKFDPTTVPTITQLLHEINAFDDKSKSYMEAPEDKSRIKDHKKTSMFKGV 417
Query: 404 RFFRSSFLQPLLKSCK 419
F FL+ L +S K
Sbjct: 418 VVFE-EFLRKLERSEK 432
>gi|449299928|gb|EMC95941.1| hypothetical protein BAUCODRAFT_509989 [Baudoinia compniacensis
UAMH 10762]
Length = 432
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 249/421 (59%), Gaps = 30/421 (7%)
Query: 8 QGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDI 67
Q + P+ +P+ L+ +Y RLFP +F+W+ N G P D F REF+F L
Sbjct: 8 QASSKPNYSSPDILRQFYQRLFPFRPLFQWL---NHGPTPQPD---FQNREFAFVLPGGA 61
Query: 68 YLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDI 127
Y+R+QSF S + + P + +IGP YS++P R + F PV +EL+FDI
Sbjct: 62 YIRYQSFLSADLFKKQCVQMTPERFEIGPQYSINPRDRKQLRKASS--FRPVMKELVFDI 119
Query: 128 DITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVC 187
D+TDYD +R CCS A +C +CW + +AIKV+DTALR+DFGF HILWVYSGRRG H W+
Sbjct: 120 DMTDYDSIRTCCSKAAICNKCWHFIIMAIKVVDTALREDFGFQHILWVYSGRRGAHAWIS 179
Query: 188 DGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLL 247
D +AR + + +R A+A Y + E KK+S PLHP + RS +VL +F++++L
Sbjct: 180 DKRAREMDDAKRKALAGYLVLAMSGEQ-GKKISIKRPLHPHVDRSL-KVLNPYFQDEVLA 237
Query: 248 SQNLFSTEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSG 306
Q+ + + E+ E+++ ++PD+ +T+ L+ KW RSSN K W + ++G
Sbjct: 238 EQDPWQSAEQAERLIRLLPDKDLTAALQKKWDSMPGRSSNQK-------WADIDAVAEAG 290
Query: 307 KQKVQGLRRCV---EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDC 363
++ V ++I +TYPRLD EVSK NHLLK+PF +HP TGRVC+PID +
Sbjct: 291 HLSTLSAKQLVDVKQDIRLEYTYPRLDAEVSKKLNHLLKSPFVIHPGTGRVCVPIDTRHL 350
Query: 364 EEFDPTTVPTLSELLREL--------NTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLL 415
+ FDP VPT++ LL+E+ N D +W+KTSL + +FR ++ LL
Sbjct: 351 DSFDPLGVPTVTALLQEIDEWESKSGNMSDEEKAKVQDWQKTSLKPYVEYFR-GYVAGLL 409
Query: 416 K 416
K
Sbjct: 410 K 410
>gi|401880844|gb|EJT45155.1| DNA primase small subunit [Trichosporon asahii var. asahii CBS
2479]
Length = 427
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 239/421 (56%), Gaps = 50/421 (11%)
Query: 11 VIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLR 70
+ D + ++ +Y RLFP+ +++W++ G+ + REF+FT++ND+Y+R
Sbjct: 2 AVTDPSSREVMRAFYKRLFPYKAVYRWLNQGD------VPGKLWTHREFAFTIENDVYIR 55
Query: 71 FQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDIT 130
+QSF++ + + + PS+ +IGP YS P R G P REL+FDID+T
Sbjct: 56 YQSFSTAYDFQKEVLRLLPSRFEIGPQYSAKPRDRKTLPAGA---LQPERRELVFDIDMT 112
Query: 131 DYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGK 190
DYD++R CCS +C CW + A+KV+D ALR+ FGF H+LWVYSGRRG+HCW+ D
Sbjct: 113 DYDEIRTCCSDKAICARCWGFIAAAVKVLDKALRETFGFKHLLWVYSGRRGIHCWISDTL 172
Query: 191 ARRLTNEQRGAIADYFRVYKGNENSNKKVSFPG----PLHPFLVRSYTEVLREFFEEKLL 246
A LT++QR A+ + V KG + KKV+ G LHP L R +L
Sbjct: 173 AMDLTDDQRRALTMFLEVIKGGKEQVKKVNVRGLGDADLHPSLNRL------------IL 220
Query: 247 LSQNLFSTEERYEKILSMIP-DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTL-Q 304
Q F +E + +L ++P D V LR +W+ +S++ RWEQL + +
Sbjct: 221 EDQECFRSERGWHTLLELLPADREVKDALRAEWESQPDASSTT------RWEQLMAHMPR 274
Query: 305 SGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
G + + +E+++ +TYPR+D EVSKHRNHLLK+PFCVHP TGRVC+P+DP+
Sbjct: 275 KGTPAYRKYKNAIEDVILQYTYPRIDAEVSKHRNHLLKSPFCVHPGTGRVCVPVDPERAH 334
Query: 365 EFDPTTVPTLSELLRELNT--------GDSR---------MDVDNEWEKTSLGKSIRFFR 407
EFDP TVP++ +LLREL+T GD + +EWEKTSL +
Sbjct: 335 EFDPATVPSVGQLLRELDTAAEMKTEEGDGSGATGEVKPASKLASEWEKTSLKPYVEMLE 394
Query: 408 S 408
S
Sbjct: 395 S 395
>gi|393212252|gb|EJC97753.1| prim-pol domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 429
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 242/405 (59%), Gaps = 33/405 (8%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P + +Y RL+P +F W+ N P F REF+FTL D+Y+R+ SF +
Sbjct: 10 PEVMMAFYKRLYPFKSVFAWL---NRQHAPT---RLFTHREFAFTLQGDVYIRYNSFTNA 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+L+ + PS+ +IG VY+ P + G P +REL+FDID+TDYD++R
Sbjct: 64 EDLKKQVVRLNPSRFEIGAVYNARPRDKKTLRAGA---LHPQQRELVFDIDMTDYDEIRT 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSG +C CW + VA+K++D +LR+ FGF HILWVYSGRRG+HCWV D +A LT+E
Sbjct: 121 CCSGKGICKRCWGFIAVAVKILDQSLREHFGFRHILWVYSGRRGIHCWVSDQEAMYLTDE 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPG----PLHPFLVRSYTEVLREFFEEKLLLSQNLFS 253
QR A+ + V KG ++ KKV+ G LHP L +S + R F +L Q+ FS
Sbjct: 181 QRKAVMGWLEVVKGGQDMTKKVNVRGLPGRQLHPSL-QSALLIARSEFSRLILDDQDCFS 239
Query: 254 TEERYEKILSMIPD-ESVTSELRGKWQENRRSSNSK-EDINFFRWEQLKNTLQSGKQKVQ 311
E+ +L ++ D + + S LR +W E+ +S K +D+ ++ GK+
Sbjct: 240 GTEQTNILLELLGDNKEIQSRLRKRWSESSSNSEEKWDDVR----REMSQATGGGKETNT 295
Query: 312 GLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTV 371
+ R VE+IV +TYPRLD EVSKHRNHLLKAPFCVHP TGRVC+P+DP ++FDP +V
Sbjct: 296 PIYRAVEDIVLQYTYPRLDAEVSKHRNHLLKAPFCVHPATGRVCVPVDPIHADQFDPESV 355
Query: 372 PTLSELLRELNT--GDSRMDVD-----------NEWEKTSLGKSI 403
PT+ +LLREL+ G++ ++ D ++WE+TSL I
Sbjct: 356 PTVGQLLRELDERGGNTAVETDTPAENGQLPHHSDWERTSLKPYI 400
>gi|339241519|ref|XP_003376685.1| DNA primase small subunit [Trichinella spiralis]
gi|316974586|gb|EFV58070.1| DNA primase small subunit [Trichinella spiralis]
Length = 911
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 232/398 (58%), Gaps = 36/398 (9%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L +YY +LFP KW+ YG+D YF RREF+F L IYLR++SF++ S
Sbjct: 516 LPLYYRKLFPFKPYIKWLRYGSD--------DYFRRREFAFILKGSIYLRYKSFDNGSYF 567
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
E + P KIDIG VY+V+P + F PVE+E++FDID++DYD++R CC
Sbjct: 568 EKEVISSVPEKIDIGAVYNVEPK-----CKQNSETFLPVEKEMVFDIDLSDYDEIRECCK 622
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G +C CW + AIKVID L DDFGF+H LWVYSGRRGVHCWV D +AR + NE+R
Sbjct: 623 GGSICKICWHFIVAAIKVIDPILLDDFGFEHRLWVYSGRRGVHCWVADKEARNMNNEERS 682
Query: 201 AIADYFRVYKGNENSNKKVSF--PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
A+A+Y V G E KKV LHP + R F LL + ++E +
Sbjct: 683 AVAEYISVVMGGEGQKKKVFLNDESVLHPVIQRGLVVASNIF--PVLLKEYSWLDSQESW 740
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
E +L +IPD+++ L ++ K D RW+ +K L S R V
Sbjct: 741 EAMLKLIPDKTIADALESIFE--------KVDTAEERWQAIKMAL-SKPHIPDNCRFAVS 791
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
EI+ + YPRLDM VSK NHLLK+PFC+HPKTG+VC+PID + +EFDPT+VP + +LL
Sbjct: 792 EILLQYIYPRLDMNVSKGINHLLKSPFCIHPKTGKVCVPIDLEKVDEFDPTSVPAIDDLL 851
Query: 379 RELNTGDS--RMDVDNE--------WEKTSLGKSIRFF 406
+EL+ D+ ++DNE + +T+L + ++ F
Sbjct: 852 KELSENDAGEENNIDNEKKNRKPLDYNRTTLKQYVQVF 889
>gi|171679615|ref|XP_001904754.1| hypothetical protein [Podospora anserina S mat+]
gi|170939433|emb|CAP64661.1| unnamed protein product [Podospora anserina S mat+]
Length = 547
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 241/413 (58%), Gaps = 25/413 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
NP+ L+ +Y LFP F+W++ H F REFS L + RFQS+ +
Sbjct: 135 NPDLLRAFYQLLFPWRHYFQWLN------HSPTPTPDFKHREFSLWLSGGVVFRFQSYAT 188
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
L + + P +I+IGP+Y+ +P R + + F PV +EL FDID+TDYDDVR
Sbjct: 189 LDLLRKDVFKHLPERIEIGPIYTANPRDRKTFRNS--SAFKPVAKELCFDIDLTDYDDVR 246
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC A++C +CW +T+AIKV+ AL++DFG++H++WVYSGRRG H WVCD KAR L +
Sbjct: 247 TCCDKANICGKCWRFITMAIKVLGVALKEDFGYEHVMWVYSGRRGAHAWVCDRKARGLDD 306
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+R AI +YF V KG E + K+V+ PLHP L RS +L+E F +L Q+ + E+
Sbjct: 307 HKRKAIGNYFSVVKGGEKTGKRVNVRRPLHPHLARSLG-ILKEHFLTDVLEGQDPWREED 365
Query: 257 RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQS-GKQKVQGLRR 315
R EK+L ++PD + L+ KW+ N S + +W + + ++ G + L
Sbjct: 366 RAEKLLMLLPDVKLRVALKEKWEANPGRS------SVVKWGDIDSVAKTMGSVNTKDLLE 419
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
++IV +TYPRLD+ V++ + HLLK+PF VHP TGRVC+PID D + FDP VPT+
Sbjct: 420 AKQDIVLEYTYPRLDILVTEQKTHLLKSPFVVHPGTGRVCVPIDTDDLDGFDPLGVPTIG 479
Query: 376 ELLRELNT--------GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKE 420
L+ E++ GD EWE+TS+ FR F+ LL+ +E
Sbjct: 480 GLVNEIDAAGGVVKKEGDDEDRRGAEWERTSIKPYTDQFR-GFVHGLLREERE 531
>gi|443917424|gb|ELU38144.1| DNA primase small subunit [Rhizoctonia solani AG-1 IA]
Length = 402
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/377 (41%), Positives = 231/377 (61%), Gaps = 28/377 (7%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
D +P +Y RL+P I+ W+ N P+ REF+ TL D+YLR+ S
Sbjct: 7 DASSPEITLAFYRRLYPFKPIYNWL---NQDHVPS---RLITNREFALTLPGDVYLRYNS 60
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F++ E++ I P++ +IGPVYS P + + G P REL+FDID+TDYD
Sbjct: 61 FSNVEEMKKEICRYNPTRFEIGPVYSARPRDKKSLRPGA---LTPTARELVFDIDMTDYD 117
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
+R CC G +C CW + VA+KV+D LR DFG+ H++WVYSGRRG+H W+ D +A
Sbjct: 118 SIRTCCVGKGICRRCWKFIAVAVKVLDRTLRQDFGYKHLMWVYSGRRGIHLWISDKEAMD 177
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSF--------PGPLHPFLVRSYTEVLREFFEEKL 245
LT+++R AI Y V KG ++ KKV+ GP+HP L +S E+L E F + +
Sbjct: 178 LTDDERRAIVQYIEVVKGGKDQTKKVNIRPSASGNATGPIHPALQKSL-EILSEDFGDLI 236
Query: 246 LLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQS 305
L+ Q++F+ + ++++L ++PD+ + + L+ W SS +K W++L++ + S
Sbjct: 237 LIDQDVFAKSDSWQELLQLLPDKDLVNLLQMSWDGREISSEAK-------WKELRSAISS 289
Query: 306 GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEE 365
K + + +E+IVF ++YPR+D EVSKHRNHLLKAPFCVHP TGR+C+P+D +E
Sbjct: 290 MKDNRKTV---IEDIVFQYSYPRIDTEVSKHRNHLLKAPFCVHPGTGRICVPVDAAHVDE 346
Query: 366 FDPTTVPTLSELLRELN 382
FDP VPT+ LLREL+
Sbjct: 347 FDPENVPTIGGLLRELD 363
>gi|116203465|ref|XP_001227543.1| hypothetical protein CHGG_09616 [Chaetomium globosum CBS 148.51]
gi|88175744|gb|EAQ83212.1| hypothetical protein CHGG_09616 [Chaetomium globosum CBS 148.51]
Length = 501
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/382 (43%), Positives = 228/382 (59%), Gaps = 18/382 (4%)
Query: 5 GPKQGNV-IPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTL 63
P QG + D + L++YY R FP +F+W++ H + F REFS L
Sbjct: 109 APPQGLIETNDTSSIELLRIYYQRFFPWRYMFQWLN------HSPIPSNDFKHREFSLWL 162
Query: 64 DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVEREL 123
ND +R+QS+ + L + P +I+IGPVY+ DP R + F P+ +EL
Sbjct: 163 HNDAVMRYQSYKTSDMLRQDVLRLMPRRIEIGPVYTADPRDRKTFRNS--TAFVPMAKEL 220
Query: 124 IFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
FDID+TDYDD+R CC A++C +CW T+AIKV+DTALRDDFG++HILWVYSGRRGVH
Sbjct: 221 CFDIDLTDYDDIRTCCDKANICNKCWKFTTMAIKVLDTALRDDFGYNHILWVYSGRRGVH 280
Query: 184 CWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEE 243
WVCD KAR L + QR A+A YF V G E KKV+ PLHP L RS ++L++ F+E
Sbjct: 281 AWVCDKKARALNDHQRKALASYFEVVTGKEG-GKKVNIRRPLHPHLSRS-IDILKDHFQE 338
Query: 244 KLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKN 301
+L Q+ + T E+ + +L IP+ + LR KW+ + R S + DI+ L
Sbjct: 339 DVLEVQDPWQTPEKADALLQQIPNLQLREALRKKWESSPGRPSVSKWADIDV-----LAQ 393
Query: 302 TLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK 361
T + L ++IV TYPRLD+ VS+ NHLLK+PF +HP TGRVC+PID
Sbjct: 394 TDGVAGLDPKDLLDAKQDIVLEHTYPRLDIAVSQKLNHLLKSPFVIHPGTGRVCVPIDRN 453
Query: 362 DCEEFDPTTVPTLSELLRELNT 383
D + FDP VPTL L+ E++
Sbjct: 454 DLDGFDPLDVPTLQGLVGEVDA 475
>gi|189241359|ref|XP_971054.2| PREDICTED: similar to DNA primase [Tribolium castaneum]
gi|270013128|gb|EFA09576.1| hypothetical protein TcasGA2_TC011690 [Tribolium castaneum]
Length = 418
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/418 (42%), Positives = 249/418 (59%), Gaps = 42/418 (10%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFPH + KW+ YG D + RRE SFTL DIYLR+QSF +
Sbjct: 12 PDLLPIYYKRLFPHTALHKWLCYG--------DPNVSNRREISFTLVGDIYLRYQSFENA 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ ++ ++ P KIDIG +Y +R + + PVERE++FDID+TDYDDVR
Sbjct: 64 EDFAQALHKRFPVKIDIGAIYK----QRLESSGSYSSSKTPVEREIVFDIDMTDYDDVRT 119
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CC+GA VC +CW M +A K++D ALR+DFGF++ILWV+SGRRG+HCWV D KAR L +
Sbjct: 120 CCTGAGVCPKCWKFMVIACKILDGALREDFGFENILWVFSGRRGIHCWVADKKARILDDN 179
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
QR AIA+Y + +G +KV F +H R+ +V+ E+FE+ +L+ Q++ T ER
Sbjct: 180 QRSAIAEYLTLLRGGL-VVRKVKFFN-MHAATERA-LKVIDEYFEKSILVEQDILGTYER 236
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK--QKV-QGLR 314
+ L I DE + R + +K + RW+ NT Q+ + QK+ + R
Sbjct: 237 LDAFLGNI-DEGFSPLF--------RDAMTKVQTSVERWKAFVNTFQTLQREQKIPKHYR 287
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
VEE+ F + YPRLD+ V+K NHLLKAPFC+HPK+G+V +P PK E FDP VPT+
Sbjct: 288 YMVEEMKFYYAYPRLDINVTKSLNHLLKAPFCIHPKSGKVSVPFKPKFIEHFDPDAVPTV 347
Query: 375 SELLRELNTGDSRMDVD--------------NEWEKTSLGKSIRFFRSSFLQPLLKSC 418
S+LL E+NT D++ +++KTSL K + F FL+ L S
Sbjct: 348 SQLLDEINTYDAKTKAQEKDLAENSQTSVKIKDYKKTSLLKYVTIF-CEFLRGLQASA 404
>gi|395326898|gb|EJF59302.1| prim-pol domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 421
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 226/368 (61%), Gaps = 15/368 (4%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ +Y RL+P +F W++ H F REF+FTL D+YLR+ SF + +L
Sbjct: 1 MLAFYRRLYPFKSLFTWLN------HEHAPTKLFTHREFAFTLQGDVYLRYNSFATSDDL 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + P++ +IGPVYS P + F+P REL+FDID++DYD VR CC+
Sbjct: 55 KKQVCAYNPTRFEIGPVYSARPRDKKTVRPAA---FSPQLRELVFDIDMSDYDPVRTCCA 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
AD+C CW + A++V+D ALRD FG+ H+LWVYSGRRG+H W+ D +A LT+EQR
Sbjct: 112 AADICRRCWQFIAAAVRVLDRALRDQFGYTHLLWVYSGRRGIHLWISDRQALELTDEQRR 171
Query: 201 AIADYFRVYKGNENSNKKVSF---PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
A+ + V +G + +KKV+ L P L ++Y ++L F E +L Q+LF++EER
Sbjct: 172 ALIGWLTVIQGGKEMHKKVNVRVGGKALPPSLGQAY-KMLEPVFHELILDDQDLFASEER 230
Query: 258 YEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
+E +L ++PD +V +L+ W+ + R+S K + K + + Q
Sbjct: 231 WEALLHLVPD-AVREKLKNAWERDPHRASADKWQNVLDELDAWKPPARHAASQTQTPAAI 289
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
E+IV +TYPRLD EVSKHRNHLLKAPFCVHPKTGRVC+P+DP+ + FDP VPT+ +
Sbjct: 290 KEDIVLQYTYPRLDAEVSKHRNHLLKAPFCVHPKTGRVCVPVDPRTIDRFDPGRVPTVHQ 349
Query: 377 LLRELNTG 384
LLREL+
Sbjct: 350 LLRELDAA 357
>gi|403180712|ref|XP_003339027.2| hypothetical protein PGTG_20567 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169327|gb|EFP94611.2| hypothetical protein PGTG_20567 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 511
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 157/408 (38%), Positives = 236/408 (57%), Gaps = 27/408 (6%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
+P+ + +Y R+FP +F W++ + + F REF+ TL ND YLR+ S+ +
Sbjct: 90 DPHVMMNFYRRIFPWKQLFLWLNQDHVPNY------LFTHREFAITLQNDAYLRYNSYAN 143
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
+L+ I P++ +IGP YS P R + F P+ REL+FDID+TDYDD+R
Sbjct: 144 YVDLQKDIIRLNPTRFEIGPAYSAPPKDRKTLPKAS---FKPILRELVFDIDLTDYDDIR 200
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CCS +C++CW +++AI+V+D LR DFG+ H+LWVYSGRRG HCWV D +A RLT+
Sbjct: 201 RCCSDKKICIKCWKFISLAIQVLDFTLRQDFGYKHLLWVYSGRRGAHCWVSDEEAMRLTD 260
Query: 197 EQRGAIADYFRVYKGNENS-NKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE 255
EQR AI Y + KG + KV PLHP + RS E+ F +L Q +F E
Sbjct: 261 EQRKAIVSYINIMKGGGSKFGLKVDLKSPLHPMVERSLMELTNSFL-PVVLRDQEVFKEE 319
Query: 256 ERYEKILSMIPDESVTSELRGKWQENRRSSNS---KEDINFFRWEQLKNTLQSGKQKVQG 312
++++ +L + D +T + W + ++ K +N+++ + + T ++K+
Sbjct: 320 DKWKFLLRIWSDTDLTKKFEQAWLSDPEITSEEKWKAVLNYYKPSEKEKTPNHSQKKLTA 379
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
LR + ++ +TYPR+D+EVSKH NHLLK+PFCVHP TG+VC+P+DPK+ + FDP VP
Sbjct: 380 LRDVINNVILHYTYPRIDLEVSKHLNHLLKSPFCVHPATGKVCVPLDPKNLDTFDPDKVP 439
Query: 373 TLSELLRELNTGDSRM-------------DVDNEWEKTSLGKSIRFFR 407
+ +LLREL+ S V W TSL + FF+
Sbjct: 440 DVRDLLRELDKHPSSTLPTPANPSASVEPPVALNWHHTSLRPYVEFFQ 487
>gi|353241683|emb|CCA73481.1| related to DNA primase 48K protein PRI1 [Piriformospora indica DSM
11827]
Length = 443
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 160/401 (39%), Positives = 234/401 (58%), Gaps = 19/401 (4%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYG------NDGRHPACDKSYFGRREFSFTLDNDI 67
D +P + +Y RL+P ++ W+S+ D P ++ REF+FTL ND
Sbjct: 15 DPKSPEVMSAFYSRLYPFKSLYTWLSHTPVPISTKDAGVPKSSTNW-THREFAFTLQNDA 73
Query: 68 YLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDI 127
YLR+ SF +L+ I PS+ +IG VY+ P + P+ REL+FDI
Sbjct: 74 YLRYNSFQEVDDLKKQIMRLIPSRFEIGAVYNARPKDKKTLPASA---LQPLRRELVFDI 130
Query: 128 DITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVC 187
D+TDYD +R CC+G +C CW ++ A+ V+DT LR DFG+ +LWVYSGRRG+HCWV
Sbjct: 131 DMTDYDAIRTCCTGGAICRRCWAFISAAVSVLDTTLRRDFGYQLLLWVYSGRRGIHCWVS 190
Query: 188 DGKARRLTNEQRGAIADYFRVYKGNENSNKKVS--FPGPLHPFLVRSYTEVLREFFEEKL 245
D A LT++QR AI + V KG ++ KKV+ G L P L S + F +
Sbjct: 191 DESAMVLTDDQRRAIMGWLEVVKGGKDMVKKVNVRVAGGLPPSLQSSLDILNENHFMPIV 250
Query: 246 LLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRS--SNSKEDINFFRWEQLKNTL 303
L Q+ F + + +E +L ++PD V S LR KW++ S+ ++ I+ RW L+ +
Sbjct: 251 LEDQDCFGSRQGWETLLELLPDREVVSNLRKKWEDEDEDDYSSKEQSISERRWNDLRREV 310
Query: 304 QS---GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP 360
++ G + L +E+IV +TYPR+D EV+KHRNHLLKAPFC+HP TGRVC+P+DP
Sbjct: 311 KAVAKGSTRRAALMAAMEDIVLQYTYPRIDAEVTKHRNHLLKAPFCIHPSTGRVCVPVDP 370
Query: 361 KDCEEFDPTTVPTLSELLRELNTGDSRMDVDN--EWEKTSL 399
K ++F P VPT+ +LL EL+ ++ + + WE TSL
Sbjct: 371 KMVKDFVPEDVPTVGQLLGELDALGTKTEDPSTLNWEHTSL 411
>gi|402222043|gb|EJU02110.1| prim-pol domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 412
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 163/425 (38%), Positives = 243/425 (57%), Gaps = 35/425 (8%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
D +P+ + +Y RLFP+ F W++ H F REF+FTL D+YLR+ S
Sbjct: 9 DPSSPDVMMQFYKRLFPYRPFFHWLN------HDHTPSKLFTYREFAFTLAGDVYLRYNS 62
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F + + ++ PS+ ++G +Y+ P + G P REL+FDID+TDYD
Sbjct: 63 FANIEDFARELRRLNPSRFEVGAIYNARPRDKRTLRAGA---LQPQMRELVFDIDMTDYD 119
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
+R CCSG +C CW + A+ V+D+ALR+ F + H+LWVYSGRRG+HCWV D A
Sbjct: 120 AIRTCCSGKGICKRCWAFIAAAVTVLDSALRNQFDYHHLLWVYSGRRGIHCWVSDKSALS 179
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFS 253
LT++QR A+ Y V KG KKV+ VR + L +F + +L Q F
Sbjct: 180 LTDDQRKALVGYLEVIKGGAEMVKKVN---------VRLGVQELGGYFSQVILEDQKCFD 230
Query: 254 TEERYEKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSG-KQKV 310
TEE E +LS++PD+++ +LR W +R SS +D+N Q G +++
Sbjct: 231 TEEGQETLLSLVPDKTIVGKLRKLWAASPDRTSSQKFKDLN-------AEISQIGDRKQA 283
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
Q L++ E+I+ + YPR+D EVSKHRNHLLKAPFC+HP TGRVC+P+DP+ ++FDP
Sbjct: 284 QALKQAQEDIMLQYLYPRIDAEVSKHRNHLLKAPFCIHPATGRVCVPVDPEKVDKFDPEA 343
Query: 371 VPTLSELLRELN-----TGDSRMD-VDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMES 424
VPT+ LL ELN ++ D + +W++TSL ++ Q L+++ +EE +
Sbjct: 344 VPTVGGLLYELNLSQQPKAEAGADPLRGDWDRTSLKPYVQMLEKHS-QALIRATREERQK 402
Query: 425 GYKAK 429
K +
Sbjct: 403 RMKVE 407
>gi|393224449|gb|EJD32837.1| prim-pol domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 416
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 163/408 (39%), Positives = 235/408 (57%), Gaps = 30/408 (7%)
Query: 12 IPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRF 71
+ +G++P +K +Y +L+P IF+W+ N G P F +REFS TL DIYLR+
Sbjct: 1 MSEGYDPETMKRFYNQLYPFKSIFRWL---NQGDQPT---KLFTQREFSATLPGDIYLRY 54
Query: 72 QSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
SF+S + + ++ P++ +IG VY+V P +R G P +RE + DID+TD
Sbjct: 55 HSFDSADDFKANLARLNPTRFEIGAVYNVRPRERKTLRAGA---LQPQQREFVLDIDMTD 111
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YD+VR CC+G +C CW + A++V+D ALR FGF+H+LWVYSGRRG+HCWV D A
Sbjct: 112 YDNVRTCCAGKGICSRCWGFIAAAVRVLDAALRTQFGFNHLLWVYSGRRGIHCWVSDADA 171
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKK--VSFPGPLHPFLV--------RSYTEVLREFF 241
LT++QR AI + V+K + K+ V G LHP + R+ F
Sbjct: 172 MNLTDDQRRAIMGWLDVFKSAKGMTKRLDVRRNGVLHPAISAASRILNPRTGDPTYTHTF 231
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKW--QENRRSSNSKEDINFFRWEQL 299
+ +L Q+ F TEER +L ++ V S LR KW + NR SS ++W+ +
Sbjct: 232 DTLVLQDQDCFKTEERSNTLLELLGHAEVASTLRAKWAARPNRDSS--------YKWDDV 283
Query: 300 KNTLQSGKQKV-QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
++ K V + L +E+I+ + YPRLD EVS+ RNHLLKAPFCVHP TGRVC+P+
Sbjct: 284 LQEVRKRKDPVLRALCNSLEDIILQYMYPRLDTEVSRRRNHLLKAPFCVHPSTGRVCVPV 343
Query: 359 DPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFF 406
DP+ ++F P VPT++ELL EL+ + WE TSL +
Sbjct: 344 DPQRVDDFRPEAVPTVNELLAELDRAEGAGVKGACWENTSLAPYVEML 391
>gi|395835523|ref|XP_003790727.1| PREDICTED: DNA primase small subunit [Otolemur garnettii]
Length = 418
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 224/340 (65%), Gaps = 23/340 (6%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSF+++
Sbjct: 10 PELLKIYYRRLFPYAQYYRWLNYG------GVIKNYFRNREFSFTLKDDIYIRYQSFSNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
LE I++ P KIDIG VYS P++ + G VF P E+EL+FDID+TDYDDVR
Sbjct: 64 KNLEKEIQKMNPYKIDIGAVYSHKPSQHNTVKLG---VFQPQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI +ID L++DFGF H LWVYSGRRGVHCWVCD +AR+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIYIIDRTLKEDFGFKHCLWVYSGRRGVHCWVCDERARKLSST 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF+ RS +++++FE+ L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPFVRRS-VNIIKKYFEKYALVDQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC- 316
++K+L+++P S + + Q+N + S+S RWE LK + V+ +C
Sbjct: 240 WDKVLALVP-----SPIHDELQQNFQKSHSSHQ----RWEHLKKAASKYQSNVKN-EKCG 289
Query: 317 --VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
+ EI+ + +PRLD+ V+K NHLLK+PF VHPKTG +
Sbjct: 290 PWLWEIMVQYCFPRLDINVTKGINHLLKSPFSVHPKTGTI 329
>gi|328862885|gb|EGG11985.1| hypothetical protein MELLADRAFT_51463 [Melampsora larici-populina
98AG31]
Length = 416
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/426 (38%), Positives = 245/426 (57%), Gaps = 41/426 (9%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY RLFP +F W++ + + F REF+ TL N+ YLR+ S+ S EL+
Sbjct: 4 YYRRLFPWKQLFLWLNQDHVPNYA------FTHREFAVTLRNEAYLRYNSYASHIELQKD 57
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
I P++ +IGP Y+ P R ++ F P+ REL+FDID+TDYDD+R CCS A
Sbjct: 58 IIRLNPTRFEIGPAYTAQPKDRKLISKAA---FKPILRELVFDIDLTDYDDIRSCCSEAR 114
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+CL+CW +T+A++V+D +LR+DFGF H+LWVYSGRRG+HCWV D +A +LT+EQR I
Sbjct: 115 ICLKCWKFITIAVQVLDLSLREDFGFQHLLWVYSGRRGIHCWVSDEEALKLTDEQRKGIV 174
Query: 204 DYFRVYKGNENSNK-KVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKIL 262
++ + +G + + KVS PLHP + RSY +L+ +F E + Q+ E+ +L
Sbjct: 175 NFLDILRGGGSRHGLKVSLTHPLHPAIERSYN-ILKVYFREIAFVEQDALKDPEKLSTVL 233
Query: 263 SMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQS--------------GKQ 308
+ + + K +++KE +F +WE++ T+ ++
Sbjct: 234 QALSESEKLKHISEKL------TSAKELTSFAKWEEIHKTVGQEIKNLDKKANSSFGDQR 287
Query: 309 KVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+ Q L+ + I +TYPR+D+EVSKH NHLLK+PFCVHP TG+VC+PIDP FDP
Sbjct: 288 RSQRLKEALINIQLHYTYPRIDLEVSKHMNHLLKSPFCVHPGTGKVCVPIDPTQIHAFDP 347
Query: 369 TTVPTLSELLRELN------TGDSRMDVDN-EWEKTSLGKSIRFFR---SSFLQPLLKSC 418
VP + +LLR+L+ TG+ + WE+TSL I F + ++ LKS
Sbjct: 348 EKVPDVRDLLRQLDKVKLNQTGEGPQQSNQPSWEQTSLKPYIEVFEKHINKIVREKLKSK 407
Query: 419 KEEMES 424
K + S
Sbjct: 408 KHKAHS 413
>gi|336375539|gb|EGO03875.1| hypothetical protein SERLA73DRAFT_175568 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388658|gb|EGO29802.1| hypothetical protein SERLADRAFT_458085 [Serpula lacrymans var.
lacrymans S7.9]
Length = 391
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 224/384 (58%), Gaps = 31/384 (8%)
Query: 23 VYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELEN 82
+Y L+P IFKW++ H F REF+FTL D+YLR+ SFN+ EL+
Sbjct: 3 AFYRMLYPFKPIFKWLN------HEQAPTKLFTHREFAFTLQGDVYLRYNSFNTADELKK 56
Query: 83 SIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGA 142
+ P++ +IGP+Y+ P + F+P++REL+FDID+TDYD +R CCSGA
Sbjct: 57 QVCALNPTRFEIGPMYTAKPKDKKTVRPAA---FSPLKRELVFDIDMTDYDSIRTCCSGA 113
Query: 143 DVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAI 202
+C CW + A+ VID+A+ + FGF +LWVYSGRRG+H W+ D +A LT+EQR AI
Sbjct: 114 GICRRCWGFIAAAVDVIDSAITEQFGFKELLWVYSGRRGIHLWISDPEAMDLTDEQRKAI 173
Query: 203 ADYFRVYKGNENSNKKVSF----PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
Y V +G + KV+ GPL P L +S L F++ +L Q+ F ++E +
Sbjct: 174 VGYLTVIEGGKEMRNKVNVRMGPRGPLPPSL-QSAVNTLDNHFDDLILDDQDCFRSDEGW 232
Query: 259 EKILSMIPDESVTSELRGKW-QENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
E +L +IPD LR W ++RSS W LK ++ V
Sbjct: 233 ESLLQLIPDRKAVDTLRKNWSHASQRSSKGA-------WADLKKHMKDYPA-------VV 278
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
++I+ +TYPRLD EVSKHRNHLLKAPFCVHPKTGRVC+P+D K +FDP+ VPT+ +L
Sbjct: 279 DDIILQYTYPRLDTEVSKHRNHLLKAPFCVHPKTGRVCVPVDAKKIHKFDPSRVPTVHQL 338
Query: 378 LREL--NTGDSRMDVDNEWEKTSL 399
LREL + WE+TSL
Sbjct: 339 LRELDAGASADSAAGGSAWERTSL 362
>gi|403370832|gb|EJY85282.1| DNA primase [Oxytricha trifallax]
Length = 427
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/427 (38%), Positives = 261/427 (61%), Gaps = 34/427 (7%)
Query: 11 VIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKS--------YFGRREFSFT 62
++ FN LK+YY + FP+ ++FKW+SY + +S YF REFSFT
Sbjct: 19 IVDMDFNVELLKIYYDKAFPYNEMFKWLSYNKFKKESRMLQSLEDDVESDYFHNREFSFT 78
Query: 63 LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERE 122
L+ND+Y R+ F + + + ++ +CP KIDIG V+++ P K H Q VF P+E+E
Sbjct: 79 LENDVYCRYLCFKNALDFKETLVSRCPHKIDIGAVFNIAP-KNHN--QADKKVFIPLEKE 135
Query: 123 LIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGV 182
++FDID+TDYD+VR CC+GA VC++CW M A +VI+ L DFGF +LWV+SGRRG+
Sbjct: 136 MVFDIDMTDYDNVRTCCTGAKVCVKCWAYMACATQVINHVLTKDFGFSSLLWVFSGRRGI 195
Query: 183 HCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFE 242
HCW+ D +AR++TNE R A+ +Y + NE +N +SF PLHP L +++ L + FE
Sbjct: 196 HCWIGDEQARQMTNEMRSAVTEYLFLPTANEMNNLDLSF--PLHPMLEKAFN-FLNKHFE 252
Query: 243 EKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNT 302
+ ++ Q+L S E +K + ++P ++ +R +W N+ + S++ + ++++ +
Sbjct: 253 QIVINDQDLLSHEAHQKKFIKILP-LNLQDSVRFEW--NKAHTGSEK---WAAYKKIVDK 306
Query: 303 LQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKD 362
QS K++ Q + R +VF + YPR+D VSK NHLLK+PFCVHPKTG++C+P DP
Sbjct: 307 YQSEKKQDQTMVR----LVFTYLYPRIDANVSKGINHLLKSPFCVHPKTGKICVPFDPNQ 362
Query: 363 CEEFDPTTVPTLSELLRELNTG-DSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
+FD V TL++++ ++ T D +++ L +S+ FR SFL+ L EE
Sbjct: 363 VFQFDIQNVATLAKVINDVGTSRDGKIE--------CLEESMAVFR-SFLRKLKTENIEE 413
Query: 422 MESGYKA 428
+ KA
Sbjct: 414 IRQIKKA 420
>gi|71018501|ref|XP_759481.1| hypothetical protein UM03334.1 [Ustilago maydis 521]
gi|46098969|gb|EAK84202.1| hypothetical protein UM03334.1 [Ustilago maydis 521]
Length = 492
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/435 (39%), Positives = 250/435 (57%), Gaps = 52/435 (11%)
Query: 12 IPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRF 71
I D +P + +Y RLFP +F W+++ D H A K F REF+FTL N+ YLR+
Sbjct: 44 IRDSSDPMSMLSFYRRLFPWKQLFSWLNH--DLAHMAATKC-FTHREFAFTLQNEAYLRY 100
Query: 72 QSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
SF+S EL+ + P++ +IGPVY+ P R + F PV+REL+FDID+TD
Sbjct: 101 NSFSSADELKKEVCRLNPARFEIGPVYTAKPKDRKTVQKAS---FKPVQRELVFDIDMTD 157
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YD+VR CCSG +C CW + VA++V+D ALR DFGF H+LWVYSGRRG+HCW+ D +A
Sbjct: 158 YDEVRTCCSGKGICKRCWAFIAVAVQVLDEALRQDFGFKHLLWVYSGRRGIHCWISDKEA 217
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKV-------SFPGPLHPFLVRSY------TEVLR 238
+L ++ R AI + V KG N KKV + LHP L R+ + L+
Sbjct: 218 FQLADDARKAIVGWLEVIKGGANQVKKVDAGWMGGAGGRSLHPSLRRAIGGEGNESGPLK 277
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESV--TSELRGKWQENRRSSNSKEDINFFRW 296
F + +L Q+ F + E++ +L ++P V ++LR KW+ RS N + +W
Sbjct: 278 LAFVDTVLKDQDCFRSPEKWNILLQLLPSSEVEAIAKLRSKWE---RSPNRS---SLEKW 331
Query: 297 EQLKNTLQ-SGKQKVQGL-RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
+ + Q +G+ K + + R C+E+I+ +TYPR+D EVSKH NHLLK+PF VHP TGRV
Sbjct: 332 QDVMECAQRAGEYKSERIWRPCLEDIILQYTYPRIDAEVSKHLNHLLKSPFVVHPATGRV 391
Query: 355 CIPIDPKDCEEFDPTT-VPTLSELLRELNT----------------------GDSRMDVD 391
C+P++P +FDP PT+++LLRELN + +V
Sbjct: 392 CVPLEPSKVFDFDPENGCPTVAQLLRELNAYEVTHKQASQAVKSNYKNEAHPAAAADNVK 451
Query: 392 NEWEKTSLGKSIRFF 406
+WEKTSL ++ F
Sbjct: 452 QDWEKTSLRPYVQRF 466
>gi|156537910|ref|XP_001608140.1| PREDICTED: DNA primase small subunit-like [Nasonia vitripennis]
Length = 404
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/412 (40%), Positives = 250/412 (60%), Gaps = 39/412 (9%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L +Y+ RLFP D+++W+ YG + + F REF F + D YLR+Q+++S ++L
Sbjct: 10 LPIYFSRLFPFEDLYEWLKYG--------EANTFACREFVFNFEGDRYLRYQAYSSLNDL 61
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+N +K K P KIDIG VY+ P+ A+ F PV++ELIFD+D+TDYD++R CCS
Sbjct: 62 KNDVKRKKPYKIDIGAVYNNPPSNYMREAE-----FYPVQKELIFDLDLTDYDEIRTCCS 116
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G +VC +CW M +AIK++DT+LR+DFGFDHILW +SGRRG+HCWVCD AR L R
Sbjct: 117 GTNVCSKCWKFMIIAIKILDTSLREDFGFDHILWTFSGRRGIHCWVCDKSARFLKKYGRL 176
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
A+A+Y ++ G E KKV +H + R+ +++ F + ++ QN+ T+E +K
Sbjct: 177 AVANYLQLVTGGEYKKKKVEINNAIHHSVQRA-LKIIEPLFVKICVIEQNMLGTQEGIDK 235
Query: 261 ILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRW----EQLKNTLQSGKQKVQGLRRC 316
L +I DE++ ++++ + + S++ RW E +N ++S
Sbjct: 236 FLGII-DEALRTDVQHLLDKYQTSAS--------RWQAFVEYFRNQIESKVDMWSKTPFL 286
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
+EEI+ + YPRLD+ VS +HLLK+PF VHP+TG++ I +DPK E FDP VPT+++
Sbjct: 287 IEEIMIQYAYPRLDINVSLGISHLLKSPFSVHPRTGKIGIILDPKTIEHFDPCEVPTVTQ 346
Query: 377 LLRELNTGDSR-----MDVDNEWE------KTSLGKSIRFFRSSFLQPLLKS 417
L +E++ DS + V N E KTSL S++ FR FL L KS
Sbjct: 347 LFKEIDVYDSTSVKQDIAVQNNQEKITDIMKTSLNTSLKLFR-VFLSDLKKS 397
>gi|443897736|dbj|GAC75075.1| eukaryotic-type DNA primase, catalytic [Pseudozyma antarctica T-34]
Length = 490
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/432 (40%), Positives = 252/432 (58%), Gaps = 49/432 (11%)
Query: 12 IPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRF 71
+ D +P + +Y RLFP +F W+++ D H K F REF+FTL N+ YLR+
Sbjct: 45 VRDSSDPMSMLSFYRRLFPWKQLFSWLNH--DLAHMPATKC-FTHREFAFTLQNEAYLRY 101
Query: 72 QSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
SF+S EL+ + P++ +IGPVY+ P R + F PV+REL+FDID+TD
Sbjct: 102 NSFSSADELKKEVCRLNPARFEIGPVYTAKPKDRKTVQKAS---FKPVQRELVFDIDMTD 158
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YD+VR CCSG +C CW + VA++V+D ALR+DFGF H+LWVYSGRRG+H W+ D +A
Sbjct: 159 YDEVRTCCSGKGICKRCWAFIAVAVQVLDEALREDFGFKHLLWVYSGRRGIHVWISDREA 218
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKV------SFPG-PLHPFLVR------SYTEVLR 238
L ++ R AI + V KG + KKV S G LHP L R S + L+
Sbjct: 219 FDLADDARKAIVGWLEVIKGGASQVKKVDAGWMGSAGGRSLHPSLRRAIGGEGSESGPLK 278
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIP--DESVTSELRGKWQENRRSSNSKEDINFFRW 296
F + +L Q+ F T E++ +L ++P + +LR KW+ R+SN + +W
Sbjct: 279 LAFVDTVLKDQDCFRTPEQWAVLLQLLPSSEAEAIEKLRSKWE---RASNRP---SLEKW 332
Query: 297 EQLKNTLQ-SGKQKVQGL-RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
+ + Q +G+ K Q L R C+E+I+ +TYPR+D EVSKH NHLLK+PF VHP TG+V
Sbjct: 333 QDVMECAQRAGEYKSQRLWRPCLEDIILQYTYPRIDAEVSKHLNHLLKSPFVVHPATGKV 392
Query: 355 CIPIDPKDCEEFDP-TTVPTLSELLRELNTGDSRMDVDNE-------------------W 394
C+P++P EFDP T PT+++LLR+LN+ ++ DN+ W
Sbjct: 393 CVPLEPAKVFEFDPDTDCPTVAQLLRQLNSYEAAHKDDNQPAKSNYKNDETASTTVKQDW 452
Query: 395 EKTSLGKSIRFF 406
EKTSL ++ F
Sbjct: 453 EKTSLRPFVQLF 464
>gi|388854304|emb|CCF52047.1| related to DNA primase 48K protein PRI1 [Ustilago hordei]
Length = 494
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 250/437 (57%), Gaps = 54/437 (12%)
Query: 12 IPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRF 71
I D +P + +Y RLFP +F W+++ D H + K F REF+FTL N+ YLR+
Sbjct: 44 IRDSSDPMSMLSFYRRLFPWKQLFAWLNH--DLPHMSATKC-FTHREFAFTLQNEAYLRY 100
Query: 72 QSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
SF S EL+ + P++ +IGPVY+ P R + F PV+REL+FDID+TD
Sbjct: 101 NSFASADELKKEVCRLNPARFEIGPVYTAKPKDRKTVQKAS---FKPVQRELVFDIDMTD 157
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YD+VR CCSG +C CW + VA++V+D ALR+DFGF H+LWVYSGRRG+HCW+ D +A
Sbjct: 158 YDEVRTCCSGKGICKRCWAFIAVAVQVLDEALREDFGFKHLLWVYSGRRGIHCWISDKEA 217
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKV------SFPG-PLHPFLVR------SYTEVLR 238
L ++ R AI + V KG N KKV S G LHP L R S + L+
Sbjct: 218 FELADDARKAIVGWLEVIKGGANQVKKVDAGWMGSAGGRSLHPSLRRAIDGEGSESGPLK 277
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMI--PDESVTSELRGKWQENRRSSNSKEDINFFRW 296
F + +L Q+ F + E++ +L ++ P+ +LR KW+ RSSN + +W
Sbjct: 278 LAFVDTVLKDQDCFRSPEQWGVLLQLLPSPEAEAIEKLRSKWE---RSSNRS---SLEKW 331
Query: 297 EQLKNTLQ-SGKQKVQGL-RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
+ + Q +G+ K + + R C+E+I+ +TYPR+D EVSKH NHLLK+PF VHP TGRV
Sbjct: 332 QDVMEAAQRAGEYKSERIWRPCLEDIILQYTYPRIDAEVSKHLNHLLKSPFVVHPATGRV 391
Query: 355 CIPIDPKDCEEFDPTT-VPTLSELLRELNTGDSR------------------------MD 389
C+P++P +FDP PT+++LLRELN ++
Sbjct: 392 CVPLEPSKVFDFDPENGCPTVAQLLRELNAYEASHKDALPAVKSNYKNELGAAADGLGAT 451
Query: 390 VDNEWEKTSLGKSIRFF 406
V +WEKTSL ++ F
Sbjct: 452 VKQDWEKTSLKPFVQLF 468
>gi|392578448|gb|EIW71576.1| hypothetical protein TREMEDRAFT_28201 [Tremella mesenterica DSM
1558]
Length = 406
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 226/370 (61%), Gaps = 21/370 (5%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ +Y RLFP+ F W+ N PA F REF+FTL D+Y+R+ SF+S +
Sbjct: 1 MNAFYRRLFPYRPFFLWL---NQDHAPA---KLFTHREFAFTLQGDVYIRYNSFHSADDF 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + PS+ +IGP YS P R A G P REL+FDID+TDYD++R CC+
Sbjct: 55 KKELLRLNPSRFEIGPQYSARPRDRKTLAAGA---LQPQRRELVFDIDMTDYDEIRTCCT 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
+C CW + A+KV+D LR+ FGF H+LWVYSGRRG+HCW+ D +A L ++QR
Sbjct: 112 DKKICKRCWGYIAAAVKVLDQTLRETFGFKHLLWVYSGRRGIHCWISDSQALDLNDDQRK 171
Query: 201 AIADYFRVYKGNENSNKKVSFPG-----PLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE 255
AI + V KG++ KKV+ G PLHPFL + L+ F L Q+ F +E
Sbjct: 172 AIVTFLEVIKGSKEQMKKVNVRGSNGEAPLHPFL-EDTLQTLKFDFARVCLEEQDCFRSE 230
Query: 256 ERYEKILSMIP-DESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQSGKQKVQG 312
+E +LS++P D +T LR WQ + R SS+ D+ R L+++ Q + +
Sbjct: 231 RGWETLLSLLPQDRDITGTLRNVWQSDPGRSSSDKWHDLQ-SRVAPLEDSDQ--HKTFRR 287
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVP 372
+R +++I+ +TYPR+D EVSKHRNHLLK+PFC+HP TGRVCIP++P +EFDP TVP
Sbjct: 288 YQRAMQDIILQYTYPRIDSEVSKHRNHLLKSPFCIHPGTGRVCIPVNPNLVDEFDPDTVP 347
Query: 373 TLSELLRELN 382
T+ ELL +L+
Sbjct: 348 TVGELLSQLD 357
>gi|317036075|ref|XP_001397568.2| DNA primase small subunit [Aspergillus niger CBS 513.88]
Length = 483
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 244/424 (57%), Gaps = 73/424 (17%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ + +Y RLFP +F+W+ N G P+ D FG REF+ TL ND YLR+QS+ +
Sbjct: 84 DTMLAFYQRLFPFRYLFQWL---NHGIVPSPD---FGNREFALTLQNDAYLRYQSYATAD 137
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
I + PS+ +IGPVY+ +P R +GG P+ +EL+FDID+TDYDD+R C
Sbjct: 138 LFRKDILKMNPSRFEIGPVYNTNPRDRKTL-RGGQ--MKPIAKELVFDIDLTDYDDIRSC 194
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C A++C +CW +T+A+KV+DTALR+DFGF+HILWVYSGRRG H WVCD +AR L +++
Sbjct: 195 CEKANICSKCWAFVTMAMKVVDTALREDFGFEHILWVYSGRRGAHAWVCDPRARNLPDDR 254
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R AIA Y V +G +S K+ N++S+E+
Sbjct: 255 RRAIAGYLDVIRGGNSSGKR-------------------------------NIWSSEQ-A 282
Query: 259 EKILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
+++LS++PD+ + LR +W+ +R S+N DI + L T +S LR
Sbjct: 283 QRLLSLLPDKGLNESLRKRWESSPDRSSANKWADI-----DALAKTGKSSTLNPTTLRDA 337
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
++IV +TYPRLD EVSK HLLK+PF +HP TGRVC+PID + E+FDP +VPT+SE
Sbjct: 338 KQDIVLEYTYPRLDSEVSKKMIHLLKSPFVIHPGTGRVCVPIDARKAEQFDPLSVPTVSE 397
Query: 377 LLRELNTGDSRMDVDN------------------------EWEKTSLGKSIRFFRSSFLQ 412
LL E++ D+ N ++EKTSL + +FR SF+
Sbjct: 398 LLAEIDAWDAEHPSTNAGPEVADGEGSVPDSDARGSRRLQDYEKTSLKPYVDYFR-SFIA 456
Query: 413 PLLK 416
LLK
Sbjct: 457 GLLK 460
>gi|431914029|gb|ELK15291.1| DNA primase small subunit [Pteropus alecto]
Length = 1526
Score = 310 bits (794), Expect = 8e-82, Method: Composition-based stats.
Identities = 171/394 (43%), Positives = 240/394 (60%), Gaps = 35/394 (8%)
Query: 51 KSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQ 110
K+YF REFSFTL +DIY+R+QSFN++S+LE +++ P KIDIG VYS P + +
Sbjct: 46 KNYFQHREFSFTLKDDIYIRYQSFNNQSDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKL 105
Query: 111 GGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALR------ 164
G F E+EL+FDID+TDYDDVR CCS AD+C +CW LMT+AI++ID AL+
Sbjct: 106 GA---FQAQEKELVFDIDMTDYDDVRRCCSSADICSKCWTLMTMAIRIIDRALKGKYRQC 162
Query: 165 -DDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPG 223
DFGF H LWVYSGRRGVHCWVCD R+L++ R I +Y + KG + KKV
Sbjct: 163 LKDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRSGIVEYLSLVKGGPDVKKKVHLSE 222
Query: 224 PLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRR 283
+HPF VR ++ ++FEE L+ Q++ +E KIL++ P E++ S+ + +N
Sbjct: 223 KIHPF-VRKSINIINKYFEEYALVDQDILGNKESCNKILALAP-ENILSQDHSLFFQNHH 280
Query: 284 SSNSKEDINFFRWEQLKNTLQS-GKQKVQGLRRCVE-EIVFAFTYPRLDMEVSKHRNHLL 341
SS RWE LK + K +E EI+ + +PRLD+ VSK NHLL
Sbjct: 281 SS-------LQRWEHLKKVARCLNNVKSDKYGPWLEWEIMLQYCFPRLDINVSKGINHLL 333
Query: 342 KAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNT--------GDSRMDV--- 390
K+PF VHPKTGR+ +PID + ++FDP TVPT+S + EL+ G+++ +
Sbjct: 334 KSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTISSICHELDAISTIEEEKGENKAESIIK 393
Query: 391 --DNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
+++KTSL ++ F FL+ L KS K E+
Sbjct: 394 HRTRDYKKTSLAPYVKVFE-QFLENLDKSRKGEL 426
>gi|393244770|gb|EJD52282.1| prim-pol domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 407
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/399 (39%), Positives = 229/399 (57%), Gaps = 30/399 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+K +Y +L+P IF+W+ N G P F +REFS TL DIYLR+ SFN+ +
Sbjct: 1 MKRFYNQLYPFQPIFRWL---NQGHQPT---KLFTQREFSATLPGDIYLRYHSFNNADDF 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ ++ P++ +IG VY+ P + G P +RE + DID+TDYD+VR CC+
Sbjct: 55 KANLARLNPTRFEIGAVYNARPRDKKTLRAGA---LQPQQREFVLDIDMTDYDNVRTCCA 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G +C CW + A+ V+D ALR FGF H+LWVYSGRRG+HCWV D A LT++QR
Sbjct: 112 GKGICARCWGFIAAAVCVLDAALRTQFGFKHLLWVYSGRRGIHCWVSDPDAMDLTDDQRR 171
Query: 201 AIADYFRVYKGNENSNKKVSF--PGPLHPFLV--------RSYTEVLREFFEEKLLLSQN 250
+ + V K ++ NK++ G LHP + R+ F +L Q+
Sbjct: 172 VLMGWLDVVKNAKDMNKRLDARRNGVLHPAISAASHILNPRTGDPTYTHTFHSLVLEDQD 231
Query: 251 LFSTEERYEKILSMIPDESVTSELRGKW--QENRRSSNSKEDINFFRWEQLKNTLQSGKQ 308
F TEE+ K+L ++ + S LR +W + NR+SS+ +W+ L+ + K
Sbjct: 232 CFKTEEQSNKLLELLGHAEIASTLRAEWAARPNRKSSD--------KWDDLRREVSKRKD 283
Query: 309 -KVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFD 367
++ LR +E+I+ + YPRLDMEVSK RNHLLKAPFCVHP TGRVC+P+DP+ ++F
Sbjct: 284 PALKALRSSIEDIILQYMYPRLDMEVSKRRNHLLKAPFCVHPSTGRVCVPVDPQRVDDFR 343
Query: 368 PTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFF 406
P VPT++ELL EL+ +S W+ TSL +
Sbjct: 344 PEAVPTVNELLAELDRAESAGVKGAGWKNTSLAPYVEML 382
>gi|440793394|gb|ELR14579.1| DNA primase small subunit [Acanthamoeba castellanii str. Neff]
Length = 437
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/384 (42%), Positives = 237/384 (61%), Gaps = 29/384 (7%)
Query: 48 ACDKSYFGRREFSFTLD----NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPA 103
A + + REFS+ ++ Y R+ ++ + E ++ ++ +CP +ID+G V+S +P
Sbjct: 41 APNGANLALREFSYEIEIGNGETTYSRYNTYANAKEFQDGLQRECPRRIDLGAVFSQEPK 100
Query: 104 KRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTAL 163
+ A P E+EL+FDIDI+DYDDVR CC GAD+C +CWPLM VAIKV+D L
Sbjct: 101 DKVLVATKR---AVPQEKELVFDIDISDYDDVRRCCKGADICGKCWPLMNVAIKVVDRIL 157
Query: 164 RDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNK--KVSF 221
R+DFGF+ ILWVYSGRRGVHCWVCD +AR+L+ E+R A+ +Y V + S+K ++
Sbjct: 158 REDFGFEIILWVYSGRRGVHCWVCDPRARKLSVEERSAVVEYISVAGQRKQSDKFSFINM 217
Query: 222 PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN 281
P LHP L ++Y EVL ++FE + + +LF E+ + +LS +P+ ++ + WQE+
Sbjct: 218 PPNLHPTLKQAYDEVLLDYFENTVFPA-HLFENEDGWNVVLSTLPN-NLRDTIAKAWQED 275
Query: 282 RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC--VEEIVFAFTYPRLDMEVSKHRNH 339
+ + RW+Q + +K LR V +IVF TYPRLD++VSKH +H
Sbjct: 276 EELTPRE------RWDQFFVAVNQAIEKGH-LRNSNPVYDIVFTCTYPRLDIQVSKHLHH 328
Query: 340 LLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDN------- 392
LLK+PFCVHP T RVC+PIDP C++FDP VPT+ LL E++ D R D+
Sbjct: 329 LLKSPFCVHPGTHRVCVPIDPDQCDDFDPQAVPTVETLLSEIDQFDKRNATDSPLRGKKG 388
Query: 393 --EWEKTSLGKSIRFFRSSFLQPL 414
++EKTSL +R F + L PL
Sbjct: 389 LRQYEKTSLRDYVRLFEKTLLVPL 412
>gi|403269431|ref|XP_003926744.1| PREDICTED: DNA primase small subunit [Saimiri boliviensis
boliviensis]
Length = 366
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 220/338 (65%), Gaps = 24/338 (7%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF +R ++ ++FEE L++Q++ +E
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-IRKSINIINKYFEEYALVNQDILENKES 239
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ EL+ +Q++ S RWE LK + ++ +C
Sbjct: 240 WDKILALVP-ETIHDELQQNFQKSHSSLQ--------RWEHLKKAASKCQNNIKN-DKCG 289
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKT 351
EI+ + +PRLD+ VSK NHLLK+PF VHPKT
Sbjct: 290 PWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKT 327
>gi|30984125|dbj|BAC76768.1| DNA primase catalytic subunit [Coprinopsis cinerea]
Length = 416
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 252/444 (56%), Gaps = 51/444 (11%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
D P + +Y RL+P I+ W++ H + F REF+FTL D+YLR++S
Sbjct: 6 DFLAPEAMLTFYRRLYPFKSIYSWLN------HDSMPTRMFTHREFAFTLQGDVYLRYRS 59
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
FNS +L+ I P++ +IGPVY+ P + G F P REL+FDID+TDYD
Sbjct: 60 FNSAEDLKKDICHLNPTRFEIGPVYTGRPRDKKTLRPGS---FTPTLRELVFDIDMTDYD 116
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
VR CCS A +C CW ++ A+KV+D ++R+ FG++ +LWVYSGRRG+H W+ D +A
Sbjct: 117 LVRTCCSDAAICKRCWTFISAAVKVLDRSIREHFGYEKLLWVYSGRRGIHLWISDVEAME 176
Query: 194 LTNEQRGAIADYFRVYK-GNENSNKKVS-------FPGPLHPFLVRSYTEVLREFFEEKL 245
L++ QR AI + V G+ ++KK++ P PL L E L F + +
Sbjct: 177 LSDAQRKAIVGWMNVVNVGSRETSKKLNVRTASKVLPPPLQDAL-----EELVPIFSDLI 231
Query: 246 LLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTL- 303
L Q+ ++E +E +L +P V LR KW + RSS+ K W LK
Sbjct: 232 LGDQDSLASENGWETLLEFVPIPQVAERLRRKWSNDPDRSSDEK-------WADLKAEAR 284
Query: 304 ---QSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP 360
++ Q+ Q L +E+I+ +TYPR+D EVSKHRNHLLKAPFCVHPKTGRVC+P+DP
Sbjct: 285 EFDKNSPQRTQ-LMHAMEDIILHYTYPRIDAEVSKHRNHLLKAPFCVHPKTGRVCVPVDP 343
Query: 361 KDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWE-----KTSLGKSIRFFRSSFLQPLL 415
+EFDP VPT+ +LL EL+ +D DN E +TSLGK ++Q L
Sbjct: 344 AKIDEFDPEKVPTVGQLLTELDEMIP-VDGDNASESELAARTSLGK--------YIQMLD 394
Query: 416 KSCKEEMESGYKAKIQQTKNSLSW 439
+ +++ KAK Q +++SW
Sbjct: 395 QHASGILDAKRKAK--QDPDTMSW 416
>gi|299751700|ref|XP_001830432.2| DNA primase catalytic subunit [Coprinopsis cinerea okayama7#130]
gi|298409494|gb|EAU91312.2| DNA primase catalytic subunit [Coprinopsis cinerea okayama7#130]
Length = 404
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 251/437 (57%), Gaps = 51/437 (11%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ +Y RL+P I+ W++ H + F REF+FTL D+YLR++SFNS +L
Sbjct: 1 MLTFYRRLYPFKSIYSWLN------HDSMPTRMFTHREFAFTLQGDVYLRYRSFNSAEDL 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ I P++ +IGPVY+ P + G F P REL+FDID+TDYD VR CCS
Sbjct: 55 KKDICHLNPTRFEIGPVYTGRPRDKKTLRPGS---FTPTLRELVFDIDMTDYDLVRTCCS 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A +C CW ++ A+KV+D ++R+ FG++ +LWVYSGRRG+H W+ D +A L++ QR
Sbjct: 112 DAAICKRCWTFISAAVKVLDRSIREHFGYEKLLWVYSGRRGIHLWISDVEAMELSDAQRK 171
Query: 201 AIADYFRVYK-GNENSNKKVS-------FPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
AI + V G+ ++KK++ P PL L E L F + +L Q+ F
Sbjct: 172 AIVGWMNVVNVGSRETSKKLNVRTASKVLPPPLQDAL-----EELVPIFSDLILGDQDCF 226
Query: 253 STEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTL----QSGK 307
++E +E +L +P V LR KW + RSS+ K W LK ++
Sbjct: 227 ASENGWETLLEFVPIPQVAERLRRKWSNDPDRSSDEK-------WADLKAEAREFDKNSP 279
Query: 308 QKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFD 367
Q+ Q L +E+I+ +TYPR+D EVSKHRNHLLKAPFCVHPKTGRVC+P+DP +EFD
Sbjct: 280 QRTQ-LMHAMEDIILHYTYPRIDAEVSKHRNHLLKAPFCVHPKTGRVCVPVDPAKIDEFD 338
Query: 368 PTTVPTLSELLRELNTGDSRMDVDNEWE-----KTSLGKSIRFFRSSFLQPLLKSCKEEM 422
P VPT+ +LL EL+ +D DN E +TSLGK ++Q L + +
Sbjct: 339 PEKVPTVGQLLTELDEMIP-VDGDNASESELAARTSLGK--------YIQMLDQHASGIL 389
Query: 423 ESGYKAKIQQTKNSLSW 439
++ KAK Q +++SW
Sbjct: 390 DAKRKAK--QDPDTMSW 404
>gi|258564951|ref|XP_002583220.1| DNA primase small subunit [Uncinocarpus reesii 1704]
gi|237906921|gb|EEP81322.1| DNA primase small subunit [Uncinocarpus reesii 1704]
Length = 518
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 215/345 (62%), Gaps = 24/345 (6%)
Query: 80 LENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCC 139
L N I PS+ +IGPVYS +P R + + F PV +EL+FDID+TDYDD+R CC
Sbjct: 155 LRNDILRLNPSRFEIGPVYSTNPRDRKTLRKS--SAFRPVSKELVFDIDLTDYDDIRTCC 212
Query: 140 SGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQR 199
A++C +CW +T+A+KVID ALRDDFGF+HILWVYSGRRG H WVCD +AR L +++R
Sbjct: 213 EKANICSKCWAFVTMAVKVIDCALRDDFGFEHILWVYSGRRGAHAWVCDQRARNLADDRR 272
Query: 200 GAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYE 259
AIA Y V +G S K+V+ PLHP + RS EVLR +F +L Q+ FS+ ++
Sbjct: 273 RAIAGYLEVVRGGAQSGKRVNVKRPLHPHITRSL-EVLRPYFGSTVLNDQDTFSSWDQAS 331
Query: 260 KILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++L +IPD+S+ L+ KW+ +R SS DI+ ++ T + L
Sbjct: 332 RLLQLIPDKSLKDSLQKKWESAPSRASSLKWSDID-----KVAKTSGGRSLDTKALLEAK 386
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
++IV +TYPRLD EVSK HLLK+PF VHP TGRVC+PID + E+F+P VPT++EL
Sbjct: 387 QDIVLEYTYPRLDAEVSKKMIHLLKSPFVVHPGTGRVCVPIDIRKVEQFNPLEVPTVTEL 446
Query: 378 LRELNTGDSRMDVDN--------------EWEKTSLGKSIRFFRS 408
L E+N D + D+ ++EKTSL I FR+
Sbjct: 447 LDEINAWDLKHKGDHGPGSDRDTKRNTLQDYEKTSLKPYIDHFRA 491
>gi|171473960|gb|AAW26809.2| SJCHGC04889 protein [Schistosoma japonicum]
Length = 442
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 171/435 (39%), Positives = 247/435 (56%), Gaps = 57/435 (13%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L++YY ++FP +W++Y + + +REFSFTL+ DIYLR+QSF+S S+
Sbjct: 4 LRIYYKKIFPCDLFAQWLTYNSRS-------TGLSKREFSFTLNGDIYLRYQSFDSSSDF 56
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCC- 139
+ + CP+KIDIG VYS P + F P +EL+FDID+TDYD+VRYCC
Sbjct: 57 RKELVKLCPTKIDIGAVYSNSPKLHRSILSSS---FKPEWKELVFDIDLTDYDEVRYCCG 113
Query: 140 ----SGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
+G+ +CL CWPL A+ ID +LR+DFGF H+LWVYSGRRGVHCWVCD AR L
Sbjct: 114 DQSATGSPICLRCWPLARSAVLCIDRSLREDFGFRHLLWVYSGRRGVHCWVCDHSARFLD 173
Query: 196 NEQRGAIADYFRVYKGNENSNKKVSFPG---------------PLHPFLVRSYTEVLREF 240
R AI +Y + +G +S K V G PL V + +L
Sbjct: 174 QTSRTAIVEYLTLVRGG-SSKKPVLTAGNYSKSNDLHSHGNIDPLFHPCVDAACNILIPR 232
Query: 241 FEE--KLLLSQNLFSTEERYEKILSMIPDE--SVTSELRGKWQENRRSSNSKEDINFFRW 296
F + QNLF R +K+LS +PDE + L G+W + + +SKE+++ RW
Sbjct: 233 FTNYCSTVNGQNLFGNRRRLDKLLSFLPDELKDLRERLSGEWLTDVQ--DSKEEVSTKRW 290
Query: 297 EQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCI 356
LK Q G ++EIV +TYPRLD VS NHLLK+PFCVHPKTG +CI
Sbjct: 291 NTLKRFFQEN-----GRTNILKEIVLNYTYPRLDANVSTGVNHLLKSPFCVHPKTGHICI 345
Query: 357 PIDPKDCEEFDPTTVPTLSELLRELNT----------GDSRMDVDNE----WEKTSLGKS 402
P +P++ + DP VPTL+EL+ +L++ D + ++++ ++ TSL +
Sbjct: 346 PFNPQEVDRLDPFNVPTLNELIEQLSSVSVNEDDIGNNDENISINDKHLLAFKNTSLRSA 405
Query: 403 IRFFRSSFLQPLLKS 417
I +F +F++ +L++
Sbjct: 406 IEYFE-TFIKEILQA 419
>gi|19114677|ref|NP_593765.1| DNA primase catalytic subunit Spp1 [Schizosaccharomyces pombe
972h-]
gi|3183125|sp|O14215.1|PRI1_SCHPO RecName: Full=DNA primase small subunit
gi|2440193|emb|CAB11078.1| DNA primase catalytic subunit Spp1 [Schizosaccharomyces pombe]
Length = 454
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 238/388 (61%), Gaps = 32/388 (8%)
Query: 3 IDGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFT 62
+DG KQG V + + YY LFP +F+W+++G P F REF+FT
Sbjct: 22 LDGAKQGAV-----DSETMIQYYRHLFPWKYLFQWLNHG-----PVVTND-FAHREFAFT 70
Query: 63 LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERE 122
L ND Y+R+ SF++ EL+ CPS+ ++GPVYS +P R + + F P+++E
Sbjct: 71 LPNDAYIRYLSFSNWEELKKEALNLCPSRFEVGPVYSANPRDRKTIRK---STFHPLKKE 127
Query: 123 LIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGV 182
L+FDID+TDYDDVR CCS ++C +CWP +T+A++V+D +DFGF HILWVYSGRRG+
Sbjct: 128 LVFDIDMTDYDDVRTCCSKTNICEKCWPFITIAVQVLDICFHEDFGFKHILWVYSGRRGI 187
Query: 183 HCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKV--SFPGPLHPFLVRSYTEVLREF 240
H W+CD A L + R IA Y +V GN ++ + PLHP L RS +L+
Sbjct: 188 HAWICDEIACSLDDRSRRMIASYLQVVVGNPQGGVRLINNLKRPLHPHLTRSLN-ILKSA 246
Query: 241 FEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQ-ENRRSSNSKEDINFFRWEQL 299
F + +L Q+ ++++E E +L ++PD+ + S LR KW+ + RSS +K W +
Sbjct: 247 FVKIVLEDQDPWASKEGAENLLKLLPDKDLASALRKKWEVDPERSSKNK-------WSDI 299
Query: 300 KNTLQSGKQKVQGLRRCV-----EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
L SG + + V ++IV + YPRLD+EVS+H NHLLK+PFCVHP T RV
Sbjct: 300 DTVLASG--SIASISPSVIAIAKQDIVLTYLYPRLDVEVSRHLNHLLKSPFCVHPGTSRV 357
Query: 355 CIPIDPKDCEEFDPTTVPTLSELLRELN 382
C+PID + + F+P VPT+++LL+EL+
Sbjct: 358 CVPIDIERMDSFNPLKVPTVNDLLQELD 385
>gi|319411694|emb|CBQ73738.1| related to DNA primase 48K protein PRI1 [Sporisorium reilianum
SRZ2]
Length = 472
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/437 (38%), Positives = 249/437 (56%), Gaps = 54/437 (12%)
Query: 12 IPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRF 71
+ D +P + +Y RLFP +F W+++ D H A K F REF+FTL N+ YLR+
Sbjct: 22 VRDSSDPMSMLSFYRRLFPWKQLFSWLNH--DLPHMAATKC-FTHREFAFTLQNEAYLRY 78
Query: 72 QSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
SF++ EL+ + P++ +IGPVY+ P R + F PV+REL+FDID+TD
Sbjct: 79 NSFSTADELKKEVCRLNPARFEIGPVYTAKPKDRKTVQKAS---FKPVQRELVFDIDMTD 135
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YD+VR CCSG +C CW + VA++V+D ALR DFGF H+LWVYSGRRG+HCW+ D +A
Sbjct: 136 YDEVRTCCSGKGICKRCWAFIAVAVQVLDEALRQDFGFKHLLWVYSGRRGIHCWISDKEA 195
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKV------SFPG-PLHPFLVR------SYTEVLR 238
+L ++ R AI + V KG N KKV S G LHP L R S + L+
Sbjct: 196 FQLADDARKAIVGWLEVIKGGANQVKKVDAGWMGSAGGRSLHPSLRRAIGGEGSESGPLK 255
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIP--DESVTSELRGKWQENRRSSNSKEDINFFRW 296
F + +L Q+ F + +++ +L ++P + +LR KW+ + S+ + +W
Sbjct: 256 LAFVDTVLKDQDCFRSPDQWNVLLQLLPSSETEAIEKLRSKWERSSSRSSLE------KW 309
Query: 297 EQLKNTLQ-SGKQKVQGL-RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
+ + Q +G+ K + + R C+E+++ +TYPR+D EVSKH NHLLK+PF VHP TG V
Sbjct: 310 QDVMECAQRAGEYKSERIWRPCLEDVILQYTYPRIDAEVSKHLNHLLKSPFVVHPATGWV 369
Query: 355 CIPIDPKDCEEFDPTT-VPTLSELLRELNTGDS------------------------RMD 389
C+P++P +FDP PT+++LLRELN ++
Sbjct: 370 CVPLEPSKVFDFDPEDGCPTVAQLLRELNAYEATHKSATPAVKSNYKNDGVAAAGDAAAT 429
Query: 390 VDNEWEKTSLGKSIRFF 406
V +WEKTSL ++ F
Sbjct: 430 VKQDWEKTSLRPFVQLF 446
>gi|164657644|ref|XP_001729948.1| hypothetical protein MGL_2934 [Malassezia globosa CBS 7966]
gi|159103842|gb|EDP42734.1| hypothetical protein MGL_2934 [Malassezia globosa CBS 7966]
Length = 471
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 249/459 (54%), Gaps = 62/459 (13%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSYG-NDGRHPACDKSYFGRREFSFTLDNDIYLRFQSF 74
+P L YY RL P ++ W++ RH F REF+ TL ND YLR+QS+
Sbjct: 36 LDPMALLAYYRRLLPFKSLYTWLNRDITPTRH-------FTHREFALTLQNDAYLRYQSY 88
Query: 75 NSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDD 134
++ E + + PS+ +IGPVYS P R + F PV REL+FDID+TDYD+
Sbjct: 89 STWDEWKKEVCRMNPSRFEIGPVYSAKPKDRKTLQKAS---FRPVARELVFDIDMTDYDE 145
Query: 135 VRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRL 194
+R CCS +C CW L+ VA +V+D LR+DFGF H++WVYSGRRG+HCWV D +A +L
Sbjct: 146 IRTCCSDKSICHRCWKLIAVAAEVLDMTLREDFGFRHLVWVYSGRRGIHCWVSDQEAFQL 205
Query: 195 TNEQRGAIADYFRVYKGNENSNKKV----SFPGP---LHPFLVRSYTE------------ 235
++ R A+ + V KG N KKV S PG LHP L R+ +
Sbjct: 206 ADDARKALVGWIEVVKGGANQAKKVALGSSMPGHHRVLHPSLRRALGQDVLRSTASASSA 265
Query: 236 ------------VLREFFEEKLLLSQNLFSTEERYEKILSMIP--DESVTSELRGKWQEN 281
+L+ F + +L Q+ F +R + +L+++P + + L+ KW +
Sbjct: 266 ATESHPRQGGSGLLQRAFVDVILRDQDCFRDPQRSDVLLALLPASETDAVARLQSKWASS 325
Query: 282 RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGL-RRCVEEIVFAFTYPRLDMEVSKHRNHL 340
RSS K W+ + + ++V+ + +E+IV +TYPR+D EVSK +NHL
Sbjct: 326 TRSSVQK-------WDDVLDMAARSAERVKPMWIAALEDIVLQYTYPRIDAEVSKRQNHL 378
Query: 341 LKAPFCVHPKTGRVCIPIDPKDCEEFDP-TTVPTLSELLRELNTGDSRM-DVDNEWEKTS 398
LKAPF VHP TGRVC+P++ + FDP ++ PT++++L+ELN + EWEKTS
Sbjct: 379 LKAPFVVHPSTGRVCVPLELDQVQMFDPHSSAPTIAQILQELNQESTNASSARGEWEKTS 438
Query: 399 LGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQTKNSL 437
L F++ ++C + +AK ++SL
Sbjct: 439 L--------RPFVEQFDRACTRMVRETQEAKRAAQRHSL 469
>gi|340378022|ref|XP_003387527.1| PREDICTED: DNA primase small subunit-like [Amphimedon
queenslandica]
Length = 371
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/389 (40%), Positives = 222/389 (57%), Gaps = 69/389 (17%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ LK YY +FP+ ++W+ Y D F REFSFTL++D+Y+R+QSF+S
Sbjct: 27 PDLLKFYYSWIFPYQKYYEWLCYDEDS---------FSHREFSFTLEDDVYVRYQSFDSC 77
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S L+ I++ CP KIDIG +++ P + H Q G+ F +EL+FDID+TDYDD+R
Sbjct: 78 SALKEGIRKNCPFKIDIGAIFNHKP-RIHKSIQPGN--FRAESKELVFDIDMTDYDDIRT 134
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS A++C CW + +AIK+ID AL +DFGF H LWVYSGRRGVHCWVCD +AR+L+
Sbjct: 135 CCSDANICHNCWTFVKIAIKIIDRALSEDFGFSHRLWVYSGRRGVHCWVCDPQARKLSQS 194
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R AIA+Y + KGN+ KKVS P+HP + + ++ E+ E L++ Q+ S+EER
Sbjct: 195 ARTAIAEYLTLVKGNDQQVKKVSLKQPIHP-SINNALGIIDEYI-ETLVMEQDYLSSEER 252
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
K+ R
Sbjct: 253 CNKL----------------------------------------------------DRTC 260
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
+E+ ++YPRLD+ V+K NHLLK+P CVHPKTGRVC+PI+ K+ ++FDP VPT+S+L
Sbjct: 261 KEVKLQYSYPRLDVNVTKGLNHLLKSPLCVHPKTGRVCVPINLKEIDDFDPFAVPTVSQL 320
Query: 378 LRELNTGDSRMDVDNEWEKTSLGKSIRFF 406
E T R D ++ TSL + F
Sbjct: 321 CHEFET---RTDGKKDYHCTSLAPYMTTF 346
>gi|393244737|gb|EJD52249.1| prim-pol domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 401
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 222/392 (56%), Gaps = 22/392 (5%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+K +Y +L+P +F+W+ N G P F +REFS TL DIYLR+ SFN+ +
Sbjct: 1 MKRFYNQLYPFQSVFRWL---NHGHQPT---KLFTQREFSATLPGDIYLRYHSFNNTDDF 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ ++ P++ +IG VY+ P + G +RE + DID+TDYD+VR CC
Sbjct: 55 KANLARLNPTRFEIGAVYNARPRDKKTLRAGA---LQTQQREFVLDIDMTDYDNVRTCCV 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G +C CW + A++V+D ALR FGF H+LWVYSGRRG+HCWV D A LT++QR
Sbjct: 112 GKGICSRCWGFIAAAVRVLDGALRTQFGFKHLLWVYSGRRGIHCWVSDPDAMDLTDDQRR 171
Query: 201 AIADYFRVYKGNENSNKKVSF----PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
+ + V K ++ NK++ H + F+ +L Q+ F TEE
Sbjct: 172 VLMGWLDVVKNAKDMNKRLDARRNGVAASHILNPQEGDPAYTHTFDRLVLQDQDCFKTEE 231
Query: 257 RYEKILSMIPDESVTSELRGKW--QENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLR 314
+ +K+L ++ + + LR +W NR SS+ +D+ L+ + ++ LR
Sbjct: 232 QSKKLLELLGHAEIAATLRAEWAAHPNRNSSSKWDDV-------LREVKKRKDPALKALR 284
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
+E+I+ + YPRLDMEVSK RNHLLKAPFCVHP TGRVC+P+DP+ ++F P VPT+
Sbjct: 285 SSLEDIILQYMYPRLDMEVSKRRNHLLKAPFCVHPSTGRVCVPVDPQRVDDFRPEAVPTV 344
Query: 375 SELLRELNTGDSRMDVDNEWEKTSLGKSIRFF 406
+ELL EL+ +S W+ TSL +
Sbjct: 345 NELLAELDRAESAGVKGAGWKNTSLAPYVEML 376
>gi|156043016|ref|XP_001588065.1| hypothetical protein SS1G_11308 [Sclerotinia sclerotiorum 1980]
gi|154695692|gb|EDN95430.1| hypothetical protein SS1G_11308 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 462
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 223/358 (62%), Gaps = 21/358 (5%)
Query: 89 PSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLEC 148
PS+ +IGPVYS +P R + + F P+ +EL FDID+TDYD++R CC A++C +C
Sbjct: 119 PSRFEIGPVYSTNPRDRKTLRKS--SAFRPIAKELCFDIDLTDYDEIRTCCDKANICNKC 176
Query: 149 WPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRV 208
W +T+AIKV+D ALRDDFGF HI+WVYSGRRG H WVCD KAR++ +++R AIA Y +
Sbjct: 177 WQFITMAIKVVDVALRDDFGFKHIMWVYSGRRGAHAWVCDKKARQMDDQKRRAIAGYLEL 236
Query: 209 YKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDE 268
+G + KKV+ PLHP + R ++L+ F+ +L Q+ + +++ +K+L ++PD
Sbjct: 237 IRGGAQTAKKVNVKRPLHPHVFRRSLDILKGHFQNDILQDQDPWEEDDKVDKLLQLLPDR 296
Query: 269 SVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQ-KVQGLRRCVEEIVFAFTYP 327
++ LR KW + S++ +W + ++ K + L ++IV +TYP
Sbjct: 297 TLNESLRKKWSSSPGRSSAS------KWADIDALAKTTKGLDPRALLEAKQDIVLEYTYP 350
Query: 328 RLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELN----- 382
RLD+EVSKH NHLLK+PF VHP TGRVC+PID + +FDP VPT+++LL E++
Sbjct: 351 RLDIEVSKHLNHLLKSPFVVHPGTGRVCVPIDTRHVGDFDPLAVPTVTQLLGEIDQWTAP 410
Query: 383 -TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQTKNSLSW 439
G+ +WEKTSL + +FR SF+ L+K ES K K ++ + + +
Sbjct: 411 QNGEIEGKSIQDWEKTSLKPFVDYFR-SFVAALIKD-----ESDVKVKRERGTDGMGF 462
>gi|344300839|gb|EGW31160.1| hypothetical protein SPAPADRAFT_63074 [Spathaspora passalidarum
NRRL Y-27907]
Length = 448
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 163/415 (39%), Positives = 236/415 (56%), Gaps = 38/415 (9%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY RL P IF+W+ N P D F +REF++ N Y R+ SF + E +NS
Sbjct: 33 YYQRLLPFRQIFQWL---NHSPKPTTD---FTKREFAYEYRNGAYQRYNSFGTLDEFKNS 86
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ P++ +IG +YS+DP +R + P +EL+FDID+TDYDD+R CCSG D
Sbjct: 87 VVRANPTRFEIGAIYSIDPKERKNVPKSA---MKPRGKELVFDIDLTDYDDIRTCCSGTD 143
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+C +CW + V K+I++ALR+DFGF +++WV+SGRRG HCWV D +AR L R AI
Sbjct: 144 ICTKCWKFIQVGSKIIESALREDFGFSNLIWVFSGRRGAHCWVSDARARNLDETMRKAII 203
Query: 204 DYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE------- 256
DY V + K+S P HP + RS+ +L+ F E +L QN + T
Sbjct: 204 DYLDVLGAKGIKSSKLSIKKPYHPHIERSFN-ILKNSFSEVILEEQNPWLTSMDANNEKA 262
Query: 257 --RYEKILSMIPDESVTSELRGKWQENRRSSNSK-EDINFFRWEQLKNTLQSGKQKVQGL 313
+ E++LS+IP +S+ ELR KW+ + SS SK +DIN LK+ +Q V L
Sbjct: 263 WVQIEELLSLIPHKSLQIELRNKWKNSYSSSRSKWDDINKLAKSVLKSNIQ-----VNQL 317
Query: 314 RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID--------PKDCE- 364
++I+ + YPRLD+EVS+ HLLK+PFC+HP TG VC+P D P++ E
Sbjct: 318 NEAKKDIIIYYMYPRLDVEVSRQVIHLLKSPFCIHPSTGNVCVPFDINKNISGNPENDEY 377
Query: 365 EFDPTTVPTLSELLRELNTG---DSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK 416
F+PT P L +L EL + + + +EKTSL + +F + F+ L+K
Sbjct: 378 GFNPTNAPNLRQLQNELEQSEVLNEEGEGKHPYEKTSLKPYVEYF-TKFVNDLVK 431
>gi|384494914|gb|EIE85405.1| DNA primase, eukaryotic-type, small subunit [Rhizopus delemar RA
99-880]
Length = 361
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 146/298 (48%), Positives = 195/298 (65%), Gaps = 11/298 (3%)
Query: 54 FGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGD 113
F REFSFTL +DIY+RF+SF + EL+ I+ P KIDIG +Y+V P + ++
Sbjct: 73 FTHREFSFTLPSDIYIRFKSFANIDELKKEIERIQPIKIDIGAIYAVKPNLKKTVSEKA- 131
Query: 114 NVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHIL 173
F P+E+EL+ DID+TDYDD+R CCSG D+C CW MTVA+KVID ALRDDFGF H+L
Sbjct: 132 --FKPIEKELVLDIDMTDYDDIRSCCSGGDICHLCWEFMTVAMKVIDAALRDDFGFKHVL 189
Query: 174 WVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSY 233
WVYSGRRGVHCW+ D +ARRLTN++R AI +Y V KG+ ++V LHP L RS
Sbjct: 190 WVYSGRRGVHCWISDERARRLTNDRRKAIVNYLNVVKGSAQKARRVKL-NVLHPSLKRSL 248
Query: 234 TEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINF 293
++L E F+ LL + + TEE KIL +IPD + ++ WQEN S +
Sbjct: 249 -DILNEHFDHLLLNNMGILDTEEGRRKILEIIPDGAAKEKIEKMWQENTHGSAQE----- 302
Query: 294 FRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKT 351
+W+ L T++ + K + +IVF + YPRLD++VS + NHLLK+PFCVHPKT
Sbjct: 303 -KWDYLNKTIEKIESKKRYKDHVGRDIVFQYAYPRLDVKVSTNINHLLKSPFCVHPKT 359
>gi|260941426|ref|XP_002614879.1| hypothetical protein CLUG_04894 [Clavispora lusitaniae ATCC 42720]
gi|238851302|gb|EEQ40766.1| hypothetical protein CLUG_04894 [Clavispora lusitaniae ATCC 42720]
Length = 455
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 251/438 (57%), Gaps = 56/438 (12%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY RL P IF+W+S+ P K F REF++ + Y R+ S+ S E + +
Sbjct: 27 YYDRLLPFKSIFQWLSHS-----PKATKD-FTMREFAYEFRSGAYQRYNSYASAEEFKKA 80
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ P++ ++G VYSV+P +R + P+ +EL+FDID+TDYD++R CCS D
Sbjct: 81 VVAANPTRFEVGAVYSVNPKERKNLPKSA---MRPLSKELVFDIDLTDYDEIRTCCSKTD 137
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+C +CW + VA K+I AL+DDFGFDH++WV+SGRRG HCW+ D +AR L R A+
Sbjct: 138 ICTKCWKFIQVATKIISAALKDDFGFDHMVWVFSGRRGAHCWISDERARHLDESARKAVV 197
Query: 204 DYFRVY--KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF-----STEE 256
+Y V + + ++ P HP + RS+ E+L++ F +L QN + S+EE
Sbjct: 198 EYLDVLGSRTQKMGRTQLGLRKPYHPHVERSF-EILKQHFPAVILDEQNPWCTDGNSSEE 256
Query: 257 RY---EKILSMIPDESVTSELRGKWQENRRSSNSK---EDINFFRWEQLKNTLQSGKQKV 310
+ E +L+ +P++S+ + LR KW+E + S S+ EDIN + LKN +Q V
Sbjct: 257 EWNSVEALLAFLPEQSLRNALRTKWKEQKSVSTSRAKWEDINAVAQKVLKNQIQ-----V 311
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK--------- 361
L +EI+F + YPRLD+EVSK HLLK+PFC+HP TG VC+P DP+
Sbjct: 312 SQLTDAKKEIIFYYMYPRLDLEVSKQMIHLLKSPFCIHPGTGNVCVPFDPEHNLSGNPDD 371
Query: 362 DCEEFDPTTVPTLSELLRELNTGDS-RMDVDN--------------EWEKTSLGKSIRFF 406
D F+P T P LS+L E++T ++ R+D + ++EKTSL I +F
Sbjct: 372 DTYGFNPMTAPNLSQLQNEIDTWEAKRVDRGSSQPLDESDSPARIADFEKTSLKPYIDYF 431
Query: 407 RSSFLQPLLKSCKEEMES 424
++F+ L+ KEE+ S
Sbjct: 432 -ATFVSGLI---KEELRS 445
>gi|150864059|ref|XP_001382746.2| p48 polypeptide of DNA primase [Scheffersomyces stipitis CBS 6054]
gi|149385315|gb|ABN64717.2| p48 polypeptide of DNA primase [Scheffersomyces stipitis CBS 6054]
Length = 437
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 247/432 (57%), Gaps = 54/432 (12%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
+Y RL P IF+W+S+ P D F REF++ + +Y R+ S+++ + +N
Sbjct: 4 FYKRLLPFKHIFQWLSHSP---KPTKD---FTMREFAYEHRSGVYQRYISYDNADDFKNH 57
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ P++ ++G VYSV+P +R + + PV +EL+FDID+TDYDD+R CC G D
Sbjct: 58 VVNSNPTRFEVGAVYSVNPKERKFLPKSA---YKPVSKELVFDIDMTDYDDIRTCCQGTD 114
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+C +CW + VA K+ID ALR+DFGF+H++WV+SGRRG HCWV D +AR L R AI
Sbjct: 115 ICTKCWRFIQVAAKIIDRALREDFGFEHLIWVFSGRRGAHCWVSDPRARNLEEGTRRAIV 174
Query: 204 DYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF------EEKLLLSQNLFSTEER 257
+Y V G + + K ++ P HP + RS+ V +EF +E L + +L ++
Sbjct: 175 EYMDVL-GAKQTKKLLNLKKPFHPHVERSFNIVKQEFAKIILEEQEPWLTTPSLADDDKA 233
Query: 258 Y---EKILSMIPDESVTSELRGKWQENRRSSNSK---EDINFFRWEQLKNTLQSGKQKVQ 311
+ E++LS IPD ++ SELR KW+ + S S+ EDIN LK+ +Q V
Sbjct: 234 WTQTEELLSFIPDNTLQSELRAKWKNSLSLSTSRSKWEDINVLAKTSLKSQVQ-----VS 288
Query: 312 GLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK---------D 362
L +EI+ + YPRLD+EVS+ HLLK+PFC+HP TG VC+P DP+ D
Sbjct: 289 QLNEAKKEIILYYMYPRLDIEVSRQVIHLLKSPFCIHPGTGNVCVPFDPRRNISMNAEDD 348
Query: 363 CEEFDPTTVPTLSELLRELN--------------TGDSRMDVDN---EWEKTSLGKSIRF 405
F+PTT P L +L REL+ G+S +V+ ++EKTSL + +
Sbjct: 349 AYGFNPTTAPNLLQLQRELDIWETKRVNRESSQPAGESGDEVETRVLDYEKTSLKPYVDY 408
Query: 406 FRSSFLQPLLKS 417
F + F+ L K+
Sbjct: 409 F-AKFVSDLTKA 419
>gi|383854480|ref|XP_003702749.1| PREDICTED: DNA primase small subunit-like [Megachile rotundata]
Length = 367
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/400 (39%), Positives = 225/400 (56%), Gaps = 76/400 (19%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ L YY RLFP D ++W+SYG+ F RREFSFTL +DIYLRFQ++ + S
Sbjct: 9 DLLPTYYARLFPFNDYYRWLSYGS--------ADLFNRREFSFTLQDDIYLRFQAYRNLS 60
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
+LE +K P KIDIG VY++ P + + G N F PVEREL+FDID+TDYD+VR C
Sbjct: 61 QLECEMKRLVPFKIDIGAVYNLCPKNQ----RKGTN-FQPVERELVFDIDMTDYDEVRTC 115
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
CSGAD+C +CW M +A K++D++LR DFG++HILWV+SGRRG+HCWVCD AR L + +
Sbjct: 116 CSGADICSKCWKFMVLACKILDSSLRLDFGYNHILWVFSGRRGLHCWVCDPSARSLGSYE 175
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
RGA+A+Y ++ G E KKV+ G +R + + F + QN+ T E
Sbjct: 176 RGAVAEYLQILDGGEYMKKKVNLSGDKIHTSIRRALDHIEAVFVPVCIEEQNILGTNEGV 235
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
EK L++ P+E +Q+ + L
Sbjct: 236 EKFLNVFPEED-------------------------------------RQEAKAL----- 253
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
LD+ V+K NHLLK+PFCVHPKTG++C+P P ++F VPT++ ++
Sbjct: 254 ----------LDINVTKGMNHLLKSPFCVHPKTGKICVPFAPSAVDKFQLDQVPTITTVI 303
Query: 379 RELNTGDSRMDVDNE-----------WEKTSLGKSIRFFR 407
E+N D + V+ E ++KTS+ KS+R F+
Sbjct: 304 EEINEFDQKEKVEQETYELSAKRIKDYKKTSINKSLRVFQ 343
>gi|226295017|gb|EEH50437.1| DNA primase small subunit [Paracoccidioides brasiliensis Pb18]
Length = 525
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 226/397 (56%), Gaps = 68/397 (17%)
Query: 89 PSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLEC 148
PS+ +IGP+YS +P R + + + F P+ +EL+FDID+TDYDD+R CC+ A++C +C
Sbjct: 129 PSRFEIGPIYSTNPRDRKSLRKA--SSFKPIAKELVFDIDLTDYDDIRTCCTKANICSKC 186
Query: 149 WPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRV 208
W +T+AIKVIDTALR+DFGF+H+LWVYSGRRG H WVCD KAR L++++R AIA Y V
Sbjct: 187 WSFVTMAIKVIDTALREDFGFEHVLWVYSGRRGAHAWVCDAKARSLSDDRRKAIAGYLEV 246
Query: 209 YKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDE 268
+G S K+V+ PLHP + RS E+L+ +F +L Q+ FS+ + E++LS++PD+
Sbjct: 247 VRGGSQSGKRVNIKRPLHPHVARSL-EILKPYFASTILGDQDTFSSAVQAEQLLSLLPDK 305
Query: 269 SVTSELRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQK------------------ 309
+ LR KW RSS SK W + +S + +
Sbjct: 306 PLVDALRKKWDSAPGRSSTSK-------WNDIDALAKSVRSRGPDGKGKGGVGGGGKALD 358
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPT 369
+ L ++I +TYPRLD EVSK HLLK+PF VHP TGRVC+PID + E+FDP
Sbjct: 359 TKALLEAKQDIALEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDVRRVEDFDPL 418
Query: 370 TVPTLSELLRELNTGDSR--------------------------------MDVD------ 391
VPT+S L+ E+N D DVD
Sbjct: 419 DVPTVSRLIAEINEWDRDEGKRKGEGAVAKDEEVNGDGIDGVGGGVPSCVADVDGKGRRL 478
Query: 392 NEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
++EKTSL I +FR SF+ L+K+ + +E +A
Sbjct: 479 QDYEKTSLKPYIDYFR-SFVAGLIKAERAGVEKRGRA 514
>gi|256083984|ref|XP_002578214.1| hypothetical protein [Schistosoma mansoni]
gi|353232175|emb|CCD79530.1| hypothetical protein Smp_160190 [Schistosoma mansoni]
Length = 410
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 168/392 (42%), Positives = 236/392 (60%), Gaps = 48/392 (12%)
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
++EFSFTL+ DIYLR+QSF+S ++L + + CP KIDIG VYS P +
Sbjct: 14 KQEFSFTLNGDIYLRYQSFDSSADLRKELVKLCPIKIDIGAVYSNAPRLHRSILSSS--- 70
Query: 116 FAPVERELIFDIDITDYDDVRYCC-----SGADVCLECWPLMTVAIKVIDTALRDDFGFD 170
P +EL+FDID+TDYD+VRYCC SG+ VCL CWPL A+ ID ALR+DFGF
Sbjct: 71 LKPEWKELVFDIDLTDYDEVRYCCGEQSTSGSPVCLRCWPLARSAVLCIDRALREDFGFQ 130
Query: 171 HILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLV 230
H+LWVYSGRRGVHCWVCD AR L R AIA+Y + +G ++KKV + PFL+
Sbjct: 131 HLLWVYSGRRGVHCWVCDRSARHLDQTSRTAIAEYLTLVRG--GNSKKV-----ILPFLI 183
Query: 231 R-SYTEVLREFFEEKLLL--------SQNLFSTEERYEKILSMIPDE--SVTSELRGKWQ 279
++T L + L+ QNLF ++R +K+LS +P E + L +W
Sbjct: 184 LIAWTSTLEKMLMNITLVFSIVATANGQNLFGNKKRLDKLLSFLPVELKDLRERLSDEWS 243
Query: 280 ENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNH 339
+ + ++KE+++ RW L+ L K G ++EIV FTYPRLD+ VS NH
Sbjct: 244 VDVQ--DNKEEVSTKRWNTLRKFL-----KENGRANVLKEIVLNFTYPRLDVNVSTGLNH 296
Query: 340 LLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELN--TGDSRMDVDNE---- 393
LLK+PFCVHPKTG +CIP +P++ ++ DP VPTL+EL+ +L+ T D +N+
Sbjct: 297 LLKSPFCVHPKTGHICIPFNPQEVDKLDPFNVPTLNELVEQLSSVTNDEHDCSNNDENIS 356
Query: 394 --------WEKTSLGKSIRFFRSSFLQPLLKS 417
++ TSL SI +F +F++ +LK+
Sbjct: 357 SNDKHLLSFKNTSLRSSIEYFE-TFIKHVLKA 387
>gi|391347758|ref|XP_003748121.1| PREDICTED: DNA primase small subunit-like [Metaseiulus
occidentalis]
Length = 418
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 226/396 (57%), Gaps = 29/396 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
LKVYY +LFP +KW+SYG D +SYF REFSFTL+ D+YLRF SF + L
Sbjct: 39 LKVYYEKLFPVNIFYKWLSYGRDP-----SESYFVNREFSFTLEGDLYLRFLSFKDQKML 93
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + + P KID+G VY K++ P ERE + DID+TD+DDVR CC
Sbjct: 94 KAELVKNNPIKIDLGAVYDNISDKQNR---------KPREREYVLDIDMTDFDDVRICCK 144
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
AD+C CWP MT+AI+ + AL +DFGF H+LWVYSGRRG+HCWV D +R +T+ R
Sbjct: 145 DADICPRCWPFMTIAIRCLHAALTEDFGFRHLLWVYSGRRGIHCWVADRISREMTSSCRN 204
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
+ Y V E + K+ +HPF+ R+ +LRE+ ++ ++ Q + E + K
Sbjct: 205 GLTSYLDVL--TEPNPKRPKIVSKIHPFMERTLV-ILREYVDDMVVSKQRWADSTEWWVK 261
Query: 261 ILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEI 320
IL M D EL + + RWE K + +Q+ + R EE+
Sbjct: 262 ILRMYMDTEKRDELESRIMAEEDGAT--------RWEIFKTVVD--QQQSKKHRFYFEEV 311
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
+F YPRLD+ VS NHLLKAPFC+HPKT RVC+PID + E+FDP VPT S L+ E
Sbjct: 312 LFHLLYPRLDVNVSTGLNHLLKAPFCLHPKTNRVCVPIDVERLEDFDPFKVPTGSSLMAE 371
Query: 381 LNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK 416
L S+ D + +KTSL + F F++ LL+
Sbjct: 372 LENY-SKDDDTPDCKKTSLRPYVELF-GRFVKRLLE 405
>gi|124809299|ref|XP_001348540.1| small subunit DNA primase [Plasmodium falciparum 3D7]
gi|3183127|sp|Q25998.1|PRI1_PLAFK RecName: Full=DNA primase small subunit; AltName: Full=DNA primase
53 kDa subunit
gi|74876424|sp|Q7KQM1.1|PRI1_PLAF7 RecName: Full=DNA primase small subunit; AltName: Full=DNA primase
53 kDa subunit
gi|23497436|gb|AAN36979.1|AE014822_14 small subunit DNA primase [Plasmodium falciparum 3D7]
gi|1430925|emb|CAA67626.1| primase [Plasmodium falciparum]
Length = 452
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 258/442 (58%), Gaps = 41/442 (9%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGND--GRHPAC-DKSYFGRREFSFTLDN 65
G++ N N L YY L P D++ W++Y ND G++ D +F +REFSFT
Sbjct: 7 GDIKDSIVNENDLIFYYRSLCPINDLYNWLNYKNDIKGKYTKLNDPHFFSKREFSFTCKK 66
Query: 66 ------DIYLRFQSFNSESELENSI-KEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAP 118
+IY+R+ SF++ E +N + + P K DIG +Y+ +++ Q GD +F P
Sbjct: 67 SDQGKEEIYIRWLSFSNPEEFKNKLLSDLVPIKFDIGAIYNFPVSQKD---QKGD-IFLP 122
Query: 119 VERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSG 178
V++ELIFDID+ DYDD+R CC+ VC CW +TVAI ++DTALR+DF F+HILWVYSG
Sbjct: 123 VQKELIFDIDMNDYDDIRTCCTDKKVCKLCWKFLTVAIVLLDTALREDFSFEHILWVYSG 182
Query: 179 RRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVL 237
RRG+HCWV D R T + R A+ADY + G++ KKVS G +P R++
Sbjct: 183 RRGIHCWVADESCRYYTTDARAALADYLNILSGSDTKKKKVSIWGKDKYPMFERAFDICY 242
Query: 238 REFFEEKLLLSQNLFST-EERYEKILSMIPDES--VTSELRG------KWQENRRSSNSK 288
+ F + L+ Q+ F +K++ +P S VT L+ K N + NS+
Sbjct: 243 KYF--DVLMEEQDFFKKGSPHVQKLIDYLPYASGKVTDPLKAMKLNELKEYINNNNFNSR 300
Query: 289 EDINFFRWEQLKNTLQSG----KQKVQG---LRRCVEEIVFAFTYPRLDMEVSKHRNHLL 341
E F ++ + N L ++ V G + V+EIVF FTYPRLD+ VSK NHLL
Sbjct: 301 EI--FEKFSSIYNFLTPSNYFKRKNVSGNINMPSFVKEIVFHFTYPRLDINVSKEINHLL 358
Query: 342 KAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLREL--NTGDSRMDVDNEWEKTSL 399
K+PFC+H TGRVC+P+D K+ F+P +VPTL +LLRE + +S ++ +N +TSL
Sbjct: 359 KSPFCIHNSTGRVCVPLDIKNINNFNPQSVPTL-KLLREQFDDPKNSHIEAEN---RTSL 414
Query: 400 GKSIRFFRSSFLQPLLKSCKEE 421
I +FR F++ +L SC E+
Sbjct: 415 KPYIDYFRRHFIENILLSCVEK 436
>gi|324512576|gb|ADY45206.1| DNA primase small subunit [Ascaris suum]
Length = 423
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/435 (37%), Positives = 238/435 (54%), Gaps = 43/435 (9%)
Query: 6 PKQGNVIPDGFNPN----YLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSF 61
P+ G ++P+ YL YY RLFP KW+SYG SYF RREF+F
Sbjct: 2 PELGTKETMSYDPSMLARYLPEYYRRLFPFKPFCKWLSYGEKA------SSYFARREFAF 55
Query: 62 TLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVER 121
L+ D++LR++SFN E E + + P K+DIG VYS P + GD F +ER
Sbjct: 56 ILEGDVHLRYRSFNDAVEFEKELCKTSPHKLDIGAVYSHQPKDNKKF---GD--FRALER 110
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
EL+FDID+TDY+++R CCS A++C +CW +T+AIKV+D L++DFGF+H LWV+SGRRG
Sbjct: 111 ELVFDIDLTDYNEIRKCCSEANLCRKCWRWITIAIKVLDNILKEDFGFEHRLWVFSGRRG 170
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
VHCW+ D AR+LT+ R A+A+Y + G+ S G +HP + +Y ++
Sbjct: 171 VHCWIADSVARKLTSMGRSAVAEYLSLISGDAKVVSVASKRGYMHPMITDAYQLIMESGE 230
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKN 301
+++++ Q S ++ + +L D SV +EL + ++++ RW L+
Sbjct: 231 FDRMVIEQGWLSDQQGFSSLLEGCTDVSVRNELNAIVNDVLSVESTEQ-----RWHALRI 285
Query: 302 TLQSGKQKVQ---GLRRC----------VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVH 348
L K+K GL C V YPRLD+ VS NHLLK+PFCVH
Sbjct: 286 KLDEIKRKEMAETGLELCQAASKEAMNYFRGFVLQHAYPRLDVNVSTSTNHLLKSPFCVH 345
Query: 349 PKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELN-------TGDSRMDVDNEWEKTSLGK 401
PKTGR+ +PI P +P T+P + LL EL+ D+R +D ++ TSL
Sbjct: 346 PKTGRIAVPITPGQVAHLNPDTLPRIDRLLSELSKVERDEKQNDNRKTLD--YKHTSLAP 403
Query: 402 SIRFFRSSFLQPLLK 416
+ F F+ +LK
Sbjct: 404 FVETF-EVFVDGVLK 417
>gi|254573272|ref|XP_002493745.1| Subunit of DNA primase, which is required for DNA synthesis and
double-strand break repair [Komagataella pastoris GS115]
gi|238033544|emb|CAY71566.1| Subunit of DNA primase, which is required for DNA synthesis and
double-strand break repair [Komagataella pastoris GS115]
gi|328354431|emb|CCA40828.1| DNA primase small subunit [Komagataella pastoris CBS 7435]
Length = 455
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 237/413 (57%), Gaps = 33/413 (7%)
Query: 5 GPKQGNVI---PDGFNPNY--LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREF 59
P + N+I + P+ ++ YY RL P +F+W++ H ++ F REF
Sbjct: 32 SPMEANLIKAESSSYTPSEYDMRNYYERLLPFKPVFEWLN------HSPIPQTDFTMREF 85
Query: 60 SFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPV 119
+F + Y R+ SF S E ++++ P++ +IG VYS++P+KR ++ N+ P+
Sbjct: 86 AFEFKSGAYQRYNSFVSAKEFKDTVVRVTPTRFEIGAVYSINPSKRKTVSK---NMMKPI 142
Query: 120 ERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGR 179
E+E + DID+TDYDD+R CCS +C +CW + VAI+++DTALRDDFGF+H++WV+SGR
Sbjct: 143 EKEFVVDIDLTDYDDIRTCCSKTGICHKCWKFINVAIEIVDTALRDDFGFEHMIWVFSGR 202
Query: 180 RGVHCWVCDGKARRLTNEQRGAIADYFRV--YKGNENSNKKVSFPGPLHPFLVRSYTEVL 237
RG HCWV D +AR + + R A+ DY V KG + N+ ++F PLHP + RS T +L
Sbjct: 203 RGAHCWVSDQRARSMNDTLRKAVIDYLDVLNLKGG-HKNRNLTFRRPLHPHIERS-TGIL 260
Query: 238 REFFEEKLLLSQNLFSTEER-YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRW 296
+ F+E +L Q+ + ++R E + I D + L W E S + +W
Sbjct: 261 LKSFKEVILEEQDPWRDDKRAIEDLAKKISDAATRESLAKLWTEKPGRS------SLEKW 314
Query: 297 EQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCI 356
+ + + G +R +IV YPRLD+EVSK HLLK+PFC+HPKTG VC+
Sbjct: 315 KDIDTQAKKG----FAVRDWKTDIVILSMYPRLDIEVSKLMGHLLKSPFCIHPKTGNVCV 370
Query: 357 PIDPKDCEEFDPTTVPTLSELLRELNTGDSRM---DVDNEWEKTSLGKSIRFF 406
P DP+ +EF P P L L E+ D+ V +EWEKTSL + I+ F
Sbjct: 371 PFDPR-VKEFWPDESPNLRSLQSEIEEWDTDHPGKSVKHEWEKTSLNEYIKMF 422
>gi|241956137|ref|XP_002420789.1| DNA primase, small subunit, putative; subunit of the DNA polymerase
alpha:primase complex, putative [Candida dubliniensis
CD36]
gi|223644131|emb|CAX41874.1| DNA primase, small subunit, putative [Candida dubliniensis CD36]
Length = 448
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 243/420 (57%), Gaps = 42/420 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+K YY RL P IF+W+S+ P D F REF++ + IY R+ SF + E
Sbjct: 29 MKFYYQRLLPFRYIFQWLSHS---PKPTKD---FTMREFAYEYRSKIYQRYNSFGTLEEF 82
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ S+ P++ +IG VY ++P +R + F P +EL+FDID+TDYDD+R CC
Sbjct: 83 KKSVVTANPTRFEIGAVYKINPKERKNLPKQA---FKPESKELVFDIDLTDYDDIRTCCQ 139
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G D+C +CW + V +I++ALR+DFGF+H++WV+SGRRG HCWV D +AR L R
Sbjct: 140 GTDICCKCWKFIQVGSNIIESALREDFGFEHLVWVFSGRRGAHCWVSDKRARNLDETTRK 199
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE----- 255
AI DY V ++N N ++ P HP + RS+ E++++ F E +L Q+ ++T
Sbjct: 200 AIVDYLDVL-SSKNQNGSLNIKKPFHPHVERSF-EIVKKEFLEVILQDQDPWNTTTDESK 257
Query: 256 --ERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL----KNTLQSGKQK 309
++ +++L+++P++S+ EL+ KW+ S SKE +W+ + N L+S Q
Sbjct: 258 AWKQVDEMLALLPNKSLQIELKNKWKGQTFGSTSKE-----KWDDISAVASNVLKSNVQV 312
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP--------- 360
Q L ++I+ + YPRLD++VS+ HLLK+PFC+HP TG VC+P DP
Sbjct: 313 AQ-LTEAKKDIIIYYMYPRLDVQVSRQVIHLLKSPFCIHPGTGNVCVPFDPLKNISGDPA 371
Query: 361 KDCEEFDPTTVPTLSELLRELNTGDSRMDVDN----EWEKTSLGKSIRFFRSSFLQPLLK 416
D F+P + P L ++ EL+ + DN ++EKTSL + +F + F+ LLK
Sbjct: 372 DDDYGFNPKSAPNLRQIQNELDEWEHNKSDDNKVVADYEKTSLKPYVDYF-AKFVNNLLK 430
>gi|358336242|dbj|GAA54796.1| DNA primase small subunit, partial [Clonorchis sinensis]
Length = 453
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 217/379 (57%), Gaps = 37/379 (9%)
Query: 54 FGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGD 113
RREFSFTL D+YLR+QSF + SE + + CP KIDIG VYS P K A
Sbjct: 66 LARREFSFTLAGDVYLRYQSFETSSEFRKELVKLCPHKIDIGAVYSTAPKKHRAILPSS- 124
Query: 114 NVFAPVERELIFDIDITDYDDVRYCC------SGADVCLECWPLMTVAIKVIDTALRDDF 167
F P +EL+FDID+TDYD+VRYCC + + VC CW L A+ +D ALR+DF
Sbjct: 125 --FKPEWKELVFDIDLTDYDEVRYCCGEQSDNAKSAVCSRCWLLAQSAVLCVDRALREDF 182
Query: 168 GFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHP 227
GF+H+LWVYSGRRGVHCWVCD AR+L R AI +Y + +G + LHP
Sbjct: 183 GFEHLLWVYSGRRGVHCWVCDPAARKLDTVARTAIVEYLTLVRGGTSQPV-------LHP 235
Query: 228 FLVRSYTEVLREFFEE--KLLLSQNLFSTEERYEKILSMIPD--ESVTSELRGKWQENRR 283
V + ++L F Q+LF R +K+LS +P+ E + S + W E+
Sbjct: 236 -CVDAACDILLPRFAAYCSTKQGQDLFGVPARLKKLLSYLPEDLEELRSHMAEDWLEH-- 292
Query: 284 SSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKA 343
SN E+++ RW L+ L+ K+ ++E+V +TYPRLD VS NHLLK+
Sbjct: 293 PSNGMEEVSQKRWNTLRTFLKEHKRN-----NVLKELVLNYTYPRLDANVSTSLNHLLKS 347
Query: 344 PFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDV-DN-------EWE 395
PFC+HPKTG VC+P DP+ +P VPTLS+L+ + GD V DN ++
Sbjct: 348 PFCIHPKTGYVCVPFDPQQVTSLNPVDVPTLSQLVEQARAGDVESSVADNSSGRHLLSYK 407
Query: 396 KTSLGKSIRFFRSSFLQPL 414
+T+L SI +F +F+Q L
Sbjct: 408 RTALKASIDYFE-AFIQRL 425
>gi|238882908|gb|EEQ46546.1| hypothetical protein CAWG_04901 [Candida albicans WO-1]
Length = 424
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 240/424 (56%), Gaps = 46/424 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+K YY RL P IF+W+S+ P D F REF++ + IY R+ SF + E
Sbjct: 1 MKFYYQRLLPFRYIFQWLSHSP---KPTKD---FTMREFAYEYRSKIYQRYNSFGTLEEF 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ S+ P++ +IG VY ++P +R + F P +EL+FDID+TDYDD+R CC
Sbjct: 55 KKSVVTANPTRFEIGAVYKINPKERKNLPKQA---FKPESKELVFDIDLTDYDDIRTCCQ 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G D+C +CW + V K+I+ ALR+DFGF+H++WV+SGRRG HCWV D +AR L R
Sbjct: 112 GTDICCKCWKFIQVGSKIIEAALREDFGFEHLVWVFSGRRGAHCWVSDKRARELDETSRK 171
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE----- 255
AI DY V ++N N ++ P HP + RS+ V +EF +L Q+ ++T
Sbjct: 172 AIIDYLDVL-SSKNQNGSLNIKKPFHPHVERSFEIVKKEFL-NVILQEQDPWNTTSEETK 229
Query: 256 --ERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL----KNTLQSGKQK 309
++ +++L+ IP++++ EL+ KW+ S SKE +W+ + N L+S Q
Sbjct: 230 AWKQVDELLAFIPNKALQIELKNKWKGQTFGSTSKE-----KWDDISTVASNVLKSNSQV 284
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP--------- 360
Q L ++I+ + YPRLD++VS+ HLLK+PFC+HP TG VC+P DP
Sbjct: 285 AQ-LTEAKKDIIIYYMYPRLDVQVSRQVIHLLKSPFCIHPGTGNVCVPFDPLKNISGNPA 343
Query: 361 KDCEEFDPTTVPTLSELLREL--------NTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQ 412
D F+P + P L ++ EL + DS+ V ++EKTSL I +F + F+
Sbjct: 344 DDDYGFNPKSAPNLRQIQNELEEWEQNRSDENDSQEKVIADYEKTSLKPYIDYF-AKFVN 402
Query: 413 PLLK 416
LLK
Sbjct: 403 NLLK 406
>gi|68467881|ref|XP_722099.1| hypothetical protein CaO19.11513 [Candida albicans SC5314]
gi|68468198|ref|XP_721938.1| hypothetical protein CaO19.4030 [Candida albicans SC5314]
gi|46443881|gb|EAL03160.1| hypothetical protein CaO19.4030 [Candida albicans SC5314]
gi|46444047|gb|EAL03325.1| hypothetical protein CaO19.11513 [Candida albicans SC5314]
Length = 452
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 240/424 (56%), Gaps = 46/424 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+K YY RL P IF+W+S+ P D F REF++ + IY R+ SF + E
Sbjct: 29 MKFYYQRLLPFRYIFQWLSHS---PKPTKD---FTMREFAYEYRSKIYQRYNSFGTLEEF 82
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ S+ P++ +IG VY ++P +R + F P +EL+FDID+TDYDD+R CC
Sbjct: 83 KKSVVTANPTRFEIGAVYKINPKERKNLPKQA---FKPESKELVFDIDLTDYDDIRTCCQ 139
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G D+C +CW + V K+I+ ALR+DFGF+H++WV+SGRRG HCWV D +AR L R
Sbjct: 140 GTDICCKCWKFIQVGSKIIEAALREDFGFEHLVWVFSGRRGAHCWVSDKRARELDETSRK 199
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE----- 255
AI DY V ++N N ++ P HP + RS+ V +EF +L Q+ ++T
Sbjct: 200 AIIDYLDVL-SSKNQNGSLNIKKPFHPHVERSFEIVKKEFL-NVILQEQDPWNTTSEETK 257
Query: 256 --ERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL----KNTLQSGKQK 309
++ +++L+ IP++++ EL+ KW+ S SKE +W+ + N L+S Q
Sbjct: 258 AWKQVDELLAFIPNKALQIELKNKWKGQTFGSTSKE-----KWDDISTVASNVLKSNSQV 312
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP--------- 360
Q L ++I+ + YPRLD++VS+ HLLK+PFC+HP TG VC+P DP
Sbjct: 313 AQ-LTEAKKDIIIYYMYPRLDVQVSRQVIHLLKSPFCIHPGTGNVCVPFDPLKNISGNPA 371
Query: 361 KDCEEFDPTTVPTLSELLREL--------NTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQ 412
D F+P + P L ++ EL + DS+ V ++EKTSL I +F + F+
Sbjct: 372 DDDYGFNPKSAPNLRKIQNELEEWEQNRSDENDSQEKVIADYEKTSLKPYIDYF-AKFVN 430
Query: 413 PLLK 416
LLK
Sbjct: 431 NLLK 434
>gi|406607228|emb|CCH41489.1| DNA primase small subunit [Wickerhamomyces ciferrii]
Length = 494
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 240/423 (56%), Gaps = 33/423 (7%)
Query: 4 DGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTL 63
D P GN P + Y YY RL P IF+W+ N P D F REF++
Sbjct: 79 DLPVSGNKTPSSSDMLY---YYERLLPFRYIFQWL---NHSPKPQKD---FTMREFAYEY 129
Query: 64 DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVEREL 123
+ Y R+ SF + + + S+ + P++ ++G VY+V+P R + P+E+EL
Sbjct: 130 RSGAYQRYNSFATLEDFKASVMKANPTRFEVGAVYAVNPKDRKTLPKTA---MKPLEKEL 186
Query: 124 IFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
+ DID+TDYDD+R CCS +C +CW +TVA K+I+ ALR+DFGF+H++WV+SGRRG H
Sbjct: 187 VIDIDLTDYDDIRTCCSKTQICTKCWKFITVATKIIEQALREDFGFEHMVWVFSGRRGAH 246
Query: 184 CWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEE 243
CWV D +AR L +R AI +Y + K NK+++ P HP + RSY E+L+ F +
Sbjct: 247 CWVSDKRARHLEEPKRRAIVEYLDILKN--KGNKRLNLRRPYHPHIERSY-EILKPEFLD 303
Query: 244 KLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTL 303
+L Q+ ++ + + E++L +PD+++ LR W SS + I +W+ + T
Sbjct: 304 IILTEQDPWADDVKAEELLKSLPDKNLNDALRKLWS----SSPGRSSIQ--KWKDIDETS 357
Query: 304 QSGKQKVQGLRRCVE---EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP 360
+ K R VE +I+ YPRLD+EV++ HLLK+PFC+HP TG VC+P D
Sbjct: 358 KKIATKTFNYRTIVEAKQDIILETMYPRLDVEVTRQMIHLLKSPFCIHPSTGNVCVPFDA 417
Query: 361 KDCEEFDPTTVPTLSELLRELN------TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPL 414
+ FDPT P L ++ E+N G + ++W+KTSL S+ F + F+Q +
Sbjct: 418 --SQGFDPTNSPNLRQIQHEINKWEIEHQGIPQDKKLHDWDKTSLKPSVDLF-AKFVQGV 474
Query: 415 LKS 417
+KS
Sbjct: 475 IKS 477
>gi|209881394|ref|XP_002142135.1| DNA primase small subunit [Cryptosporidium muris RN66]
gi|209557741|gb|EEA07786.1| DNA primase small subunit, putative [Cryptosporidium muris RN66]
Length = 435
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 229/388 (59%), Gaps = 43/388 (11%)
Query: 19 NYLKVYYGRLFPHADIFKWMSY----GNDGRHPACDKSYFGRREFSFTL-----DNDIYL 69
N LK +Y R++P + KW+SY G+ P REFS TL +++IYL
Sbjct: 15 NDLKFFYSRIYPFDIMSKWLSYELGTGSSNLLP--------NREFSMTLISNMGEDEIYL 66
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R+QS+ + +L+ + + P K DIG +Y++ A++ G F P +REL+FDID+
Sbjct: 67 RWQSYMTIDQLKQELVSRVPHKFDIGAIYNIPVAEKDISPLG----FTPYQRELVFDIDM 122
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
DYDD+R CC +C +CW + +AIK+IDT+L +DFGF H+LW+YSGRRGVHCWVCD
Sbjct: 123 NDYDDIRTCCKDKKICNKCWLYIALAIKLIDTSLHEDFGFRHVLWIYSGRRGVHCWVCDT 182
Query: 190 KARRLTNEQRGAIADYFRVYKGNENSNKKVSFP-----GPLHPFLVRSYTEVLREFFEEK 244
KAR + E R +I DY + GN+N KKV+ LHPF+ R Y+ ++ F ++
Sbjct: 183 KARLIPTEARTSIVDYLTLVTGNDNRKKKVNLKFAISNSKLHPFIERCYSICIQYF--DR 240
Query: 245 LLLSQNLFS-TEERYEKILSMIPDESVTSELRGKWQENR--RSSNSKEDINFFRWEQLKN 301
++ Q+LF+ + +KIL + D+S ++ W N + S E W LK
Sbjct: 241 IIEEQDLFNHNSDHIQKILDHVSDDSKVLQILKIWISNNTCKGFTSTE-----FWLALKK 295
Query: 302 TLQSGKQKVQGLRRC--VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID 359
L ++V G + C ++EIVFAF+YPRLD VSK HLLKAP C+H TGR+C+PID
Sbjct: 296 IL----EEVHG-KNCTTLKEIVFAFSYPRLDTNVSKDLGHLLKAPMCIHHGTGRLCVPID 350
Query: 360 PKDCEEFDPTTVPTLSELLRELNTGDSR 387
P E F+P VPTL+++ E + ++
Sbjct: 351 PTTVEFFNPRCVPTLTKIRAEYDAISTK 378
>gi|448088304|ref|XP_004196514.1| Piso0_003736 [Millerozyma farinosa CBS 7064]
gi|448092446|ref|XP_004197545.1| Piso0_003736 [Millerozyma farinosa CBS 7064]
gi|359377936|emb|CCE84195.1| Piso0_003736 [Millerozyma farinosa CBS 7064]
gi|359378967|emb|CCE83164.1| Piso0_003736 [Millerozyma farinosa CBS 7064]
Length = 480
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 242/437 (55%), Gaps = 60/437 (13%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY R+ P IF+W+++ P K F REF+F + Y R+ SFNS + + S
Sbjct: 46 YYERVLPFKQIFQWLNHS-----PKVGKD-FTMREFAFEFRSGAYQRYNSFNSHEDFKKS 99
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ P++ ++G VYSV+P +R + P+ +EL+FDID+TDYDD+R CC D
Sbjct: 100 VVNANPTRFEVGAVYSVNPKERKNLPKSA---LRPLSKELVFDIDLTDYDDIRRCCQKTD 156
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+C +CW + VA KV++ AL DDFGF+H +WV+SGRRG HCWV D AR L R +I
Sbjct: 157 ICTKCWKFIQVATKVLNAALADDFGFEHFIWVFSGRRGAHCWVSDKSARGLDETTRKSII 216
Query: 204 DYFRVY--KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE------ 255
DY + K N+ + ++ P HP + RS+ ++L++ F + +L QNL+ T
Sbjct: 217 DYLDLLNAKKNKRGSTSLNLKRPFHPHVERSF-DILKQHFVDIILEDQNLWLTTPETSPD 275
Query: 256 ----ERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL----KNTLQSGK 307
E E++LS +P+ S+ EL KW+ S SK+ +WE + K TL+
Sbjct: 276 SKEWESVEELLSFLPEVSLREELSQKWKTQVSISTSKQ-----KWEDINSVAKKTLKHQN 330
Query: 308 QKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP------- 360
Q V L ++I+ F YPRLD EV+K HLLK+PFC+HP TG +C+P DP
Sbjct: 331 Q-VNLLNEAKKDIIIYFLYPRLDAEVTKQLIHLLKSPFCIHPSTGNICVPFDPLQNLSDN 389
Query: 361 --KDCEEFDPTTVPTLSELLRE--------LNTGDSRM------DVDN----EWEKTSLG 400
D F+PTTVP+LS + E +N G S+ DV+N ++EKTSL
Sbjct: 390 REDDEYGFNPTTVPSLSLIQTEIEIWDTKRINKGSSQQYEESDSDVENRRVLDFEKTSLK 449
Query: 401 KSIRFFRSSFLQPLLKS 417
+ +F +++ L+K+
Sbjct: 450 PYVEYF-TNYANKLVKA 465
>gi|294656763|ref|XP_459079.2| DEHA2D13838p [Debaryomyces hansenii CBS767]
gi|199431724|emb|CAG87247.2| DEHA2D13838p [Debaryomyces hansenii CBS767]
Length = 484
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 240/437 (54%), Gaps = 57/437 (13%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ YY RL P +F+W+ N P D F REF++ + Y R+ S+ + E
Sbjct: 45 MAFYYERLLPFRYVFQWL---NHSPKPTKD---FTMREFAYEFRSGAYQRYNSYMTLDEF 98
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ S+ + P++ ++G VYSV+P +R + P+ +EL+FDID+TDYDD+R CCS
Sbjct: 99 KKSVVKANPTRFEVGAVYSVNPRERKNLPKSA---LKPLNKELVFDIDLTDYDDIRTCCS 155
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G D+C +CW + VA K+ID ALR+DFGF H++WV+SGRRG HCWV D AR L R
Sbjct: 156 GTDICKKCWKFIQVASKIIDQALREDFGFKHLIWVFSGRRGAHCWVSDNNARTLDEITRK 215
Query: 201 AIADYFRVY--KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE--- 255
+I +Y V K ++ K ++ P HP + RS+ +L++ F +L Q+ + T
Sbjct: 216 SIVEYLDVLGSKQSKIGKKSLNLKRPFHPHVERSFN-ILKQEFVNIILEEQDPWFTSADS 274
Query: 256 -------ERYEKILSMIPDESVTSELRGKWQENRRSSNSK---EDINFFRWEQLKNTLQS 305
E+ E++L+ +PD S+ ELR KW+E R S SK EDIN + LK+
Sbjct: 275 SSDSKAWEKVEELLAFMPDISLQEELRQKWKEQRTLSTSKSKWEDINTIAKKTLKH---- 330
Query: 306 GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP----- 360
+ +V L ++I+ + YPRLD+EVSK HLLK+PFC+HP TG VC+P +P
Sbjct: 331 -QNQVNQLNEAKKDIIVYYMYPRLDIEVSKQLIHLLKSPFCIHPGTGNVCVPFNPLKNLS 389
Query: 361 ----KDCEEFDPTTVPTLSELLREL-------------NTGDSRMDVDN----EWEKTSL 399
D F+P P LS L EL GDS + D+ ++EKTS+
Sbjct: 390 DDKDDDSYGFNPMNAPNLSLLQTELEIWETKRIKGDSSQQGDSETESDDRRVLDFEKTSM 449
Query: 400 GKSIRFFRSSFLQPLLK 416
+ +F + F+ LLK
Sbjct: 450 KPYVDYF-AKFVNDLLK 465
>gi|190344685|gb|EDK36413.2| hypothetical protein PGUG_00511 [Meyerozyma guilliermondii ATCC
6260]
Length = 464
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 255/469 (54%), Gaps = 59/469 (12%)
Query: 6 PKQGNVIPD-GFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD 64
P Q V D G + + + +Y RL P IF+W+ N P+ D F REF++
Sbjct: 11 PSQAAVPADSGVSSSDMLFFYQRLLPFRQIFQWL---NHSPKPSKD---FTMREFAYEYR 64
Query: 65 NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELI 124
Y R+ SF++ E + S+ + P++ ++G VYSV+P +R + P+ +EL+
Sbjct: 65 TGAYQRYNSFSNLEEFKKSVVQANPTRFEVGAVYSVNPKERKRLPKQA---LKPLAKELV 121
Query: 125 FDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHC 184
FDID+TDYD++R CCSG D+C +CW + VAIK++D ALR+DFGF+ ++WV+SGRRG HC
Sbjct: 122 FDIDLTDYDEIRTCCSGTDICKKCWRFIQVAIKILDAALREDFGFNRLIWVFSGRRGAHC 181
Query: 185 WVCDGKARRLTNEQRGAIADYFRVY--KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFE 242
WV D +AR L R +I +Y V + N +S P HP + RS+ ++L+ F
Sbjct: 182 WVSDARARCLDETTRKSIVEYLDVLGSRSNRQGKNSLSLKRPFHPHVERSF-DLLKNEFV 240
Query: 243 EKLLLSQNLFSTE---------ERYEKILSMIPDESVTSELRGKWQENRRSSNSK---ED 290
+ +L Q+ ++T E+ E +LS +P++ + ELR KW+ S S ED
Sbjct: 241 DIILKEQDPWNTSSSEPSDKSWEQVETLLSYVPEKPLQEELRRKWKSQTSVSTSMSKWED 300
Query: 291 INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
I + LK+ + +V L ++I+ + YPRLD+EVSK HLLK+PFCVHP
Sbjct: 301 ITVIAKKILKH-----QNQVNALNEAKKDIILFYMYPRLDIEVSKQLIHLLKSPFCVHPS 355
Query: 351 TGRVCIPIDP----KDCEE-----FDPTTVPTLSELLRELNTGD-SRMDVD--------- 391
TG +C+P DP + EE F+PT P L +L E+ D R++ D
Sbjct: 356 TGNICVPFDPHHNLSNNEEDDDYGFNPTNAPNLRQLQNEIEVWDVRRVNRDSSQPLEDGE 415
Query: 392 -------NEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQT 433
+E+EKTSL + +F+ F+ LLK E +SG + + T
Sbjct: 416 SEADKRISEYEKTSLKPYVEYFQ-KFVNNLLKD--ELKDSGKRGRDDDT 461
>gi|66357134|ref|XP_625745.1| DNA primase small subunit [Cryptosporidium parvum Iowa II]
gi|46226731|gb|EAK87710.1| DNA primase small subunit [Cryptosporidium parvum Iowa II]
Length = 402
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/384 (40%), Positives = 224/384 (58%), Gaps = 31/384 (8%)
Query: 57 REFSFTL-----DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQG 111
REFS T+ ++IYLR+Q F + +L+ I + P K DIG +Y++ +++ G
Sbjct: 23 REFSMTIKSEIDQDEIYLRWQHFKTIDQLKQEIVARTPHKFDIGAIYNIPISEKEISPLG 82
Query: 112 GDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDH 171
F PV+REL+FDID+ DYDD+R CC +C +CW +TVAI++IDT+LR DFGF H
Sbjct: 83 ----FKPVQRELVFDIDMNDYDDIRTCCQEKTICEKCWLYVTVAIRLIDTSLRQDFGFKH 138
Query: 172 ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP------- 224
ILW+YSGRRGVHCWVCD KAR L +E R AI DY + GNEN KKV+
Sbjct: 139 ILWLYSGRRGVHCWVCDTKARLLPSEARTAIIDYLTLVTGNENRKKKVNLKTSNNQNGIK 198
Query: 225 LHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY-EKILSMIPDESVTSELRGKWQENRR 283
HPF+ R + ++ F +++L +Q +F + EK+L+ + +++ + W +
Sbjct: 199 SHPFIDRCFNICMQYF--DQILENQQIFDHNSIHIEKVLNHLSEDTKVYQTVQNWIQKTS 256
Query: 284 SSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKA 343
E W+ L NTLQ K ++EIVFA++YPRLD+ VSK HLLKA
Sbjct: 257 DFTCLE-----FWDFLSNTLQKSSDKSH--LTLLKEIVFAYSYPRLDINVSKDLGHLLKA 309
Query: 344 PFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEK----TSL 399
PFC+H TGR+CIPID F+P TVPTL+ + + + + D+ + +S+
Sbjct: 310 PFCIHHSTGRLCIPIDTSQNFNFNPKTVPTLTSIRNDYDNNVCQKDIKSNTTTYTIPSSI 369
Query: 400 GKSIRFFRSSFLQPLLKSCKEEME 423
K I+F +F+ L++ K+E E
Sbjct: 370 SKYIQFM-DNFVDNLIQDTKKEQE 392
>gi|354543261|emb|CCE39979.1| hypothetical protein CPAR2_100170 [Candida parapsilosis]
Length = 426
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 238/436 (54%), Gaps = 47/436 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY RL P IF W S+ P D F REF++ + Y R+ S++ E
Sbjct: 1 MEFYYQRLLPFKHIFTWTSHSP---KPTKD---FTMREFAYEYRSTAYKRYNSYSDLEEF 54
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ ++ P++ +IG VY V P +R+ + PV +EL+FDID+TDYD++R CC
Sbjct: 55 KKAVISANPTRFEIGAVYKVAPKERYNLPK---QALKPVSKELVFDIDLTDYDEIRTCCQ 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G D+C +CW + V +I+ LR DFGF H++WV+SGRRG HCWV D +AR L R
Sbjct: 112 GTDICCKCWKFIQVGSTIIEDCLRQDFGFQHLVWVFSGRRGAHCWVSDKRARELDENSRR 171
Query: 201 AIADYFRVYKG-NENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE---- 255
+I +Y V G + +K + P HP + RS+ + R F E +L Q+ + T+
Sbjct: 172 SIVEYLDVLGGKHAKGSKGLHVRKPFHPHVERSFESMKRRFI-EIILEDQDPWYTDPNTE 230
Query: 256 ------ERYEKILSMIPDESVTSELRGKWQENRRSSNSK---EDINFFRWEQLKNTLQSG 306
++ E++LS +P++ + +ELR KWQ R+ S SK ED+N + K +Q
Sbjct: 231 SDSKNWKQVEELLSFMPNKELQAELRKKWQGERKVSTSKDKWEDLNTIAAKLFKTNIQ-- 288
Query: 307 KQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK----- 361
V L +E++ + YPRLD+EVS+ HLLK+PFCVHP TG VC+P DPK
Sbjct: 289 ---VALLSDAKKEVIIYYLYPRLDIEVSRQIIHLLKSPFCVHPGTGNVCVPFDPKKNISG 345
Query: 362 ----DCEEFDPTTVPTLSELLRELN----TGDSRMDVDN--EWEKTSLGKSIRFFR---S 408
D F+PTT P L +LL EL+ G +D N W+KTSL + F+
Sbjct: 346 VASDDAYGFNPTTAPNLKQLLTELDDYERNGSGDIDDVNVPAWDKTSLKPYVDLFKKHVK 405
Query: 409 SFLQPLLKSCKEEMES 424
+ + +K+ K E++S
Sbjct: 406 NLVTAEMKTEKRELDS 421
>gi|448532249|ref|XP_003870387.1| Pri1 protein [Candida orthopsilosis Co 90-125]
gi|380354742|emb|CCG24257.1| Pri1 protein [Candida orthopsilosis]
Length = 460
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 242/437 (55%), Gaps = 49/437 (11%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY RL P IF W S+ P D F REF++ + Y R+ S+++ E
Sbjct: 35 MQFYYQRLLPFKYIFTWTSHSP---KPTKD---FTMREFAYEYRSTAYKRYNSYSNVDEF 88
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ ++ P++ +IG VY V P +R+ + PV +EL+FDID+TDYD++R CC
Sbjct: 89 KKAVISANPTRFEIGAVYKVAPKERYNLPK---QALKPVSKELVFDIDLTDYDEIRTCCQ 145
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G D+C +CW + V +I+ LR DFGF H++WV+SGRRG HCWV D +AR L R
Sbjct: 146 GTDICCKCWKFIQVGSTIIEDCLRQDFGFQHMVWVFSGRRGAHCWVSDKRARELDENSRR 205
Query: 201 AIADYFRVYKG-NENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE---- 255
+I +Y V G + +K P HP + RS+ E++++ F E +L Q+ + T+
Sbjct: 206 SIVEYLDVLGGKHAKGSKGFHVRKPFHPHVERSF-EIMKKRFIEIILEDQDPWYTDPNTE 264
Query: 256 ------ERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKN----TLQS 305
++ +++LS +P++ + +EL+ KWQ + S SK+ +WE L L+S
Sbjct: 265 SDSKSWKQVDELLSFMPNKELQAELKKKWQGECKMSTSKD-----KWEDLNTVAAKVLKS 319
Query: 306 GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK---- 361
Q V L +EI+ F YPRLD+EVS+ HLLK+PFCVHP TG VC+P DPK
Sbjct: 320 NSQ-VASLSDAKKEIIIYFLYPRLDIEVSRQIIHLLKSPFCVHPGTGNVCVPFDPKKSIS 378
Query: 362 -----DCEEFDPTTVPTLSELLRELN--TGDSRMDVDN----EWEKTSLGKSIRFFR--- 407
D F+PTT P L +LL EL+ + D+D+ W+KTSL + F+
Sbjct: 379 GVASDDAYGFNPTTAPNLKQLLTELDEYEQNGSGDIDDVNVPAWDKTSLKPYVDLFKKHV 438
Query: 408 SSFLQPLLKSCKEEMES 424
++ +K+ K E++S
Sbjct: 439 GDLVKTEMKNGKRELDS 455
>gi|146422390|ref|XP_001487134.1| hypothetical protein PGUG_00511 [Meyerozyma guilliermondii ATCC
6260]
Length = 464
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 258/469 (55%), Gaps = 59/469 (12%)
Query: 6 PKQGNVIPD-GFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD 64
P Q V D G + + + +Y RL P IF+W+ N P+ D F REF++
Sbjct: 11 PSQAAVPADSGVSSSDMLFFYQRLLPFRQIFQWL---NHSPKPSKD---FTMREFAYEYR 64
Query: 65 NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELI 124
Y R+ SF++ E + S+ + P++ ++G VYSV+P +R + P+ +EL+
Sbjct: 65 TGAYQRYNSFSNLEEFKKSVVQANPTRFEVGAVYSVNPKERKRLPKQA---LKPLAKELV 121
Query: 125 FDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHC 184
FDID+TDYD++R CCSG D+C +CW + VAIK++D ALR+DFGF+ ++WV+SGRRG HC
Sbjct: 122 FDIDLTDYDEIRTCCSGTDICKKCWRFIQVAIKILDAALREDFGFNRLIWVFSGRRGAHC 181
Query: 185 WVCDGKARRLTNEQRGAIADYFRVYKGNENSNKK--VSFPGPLHPFLVRSYTEVLREFFE 242
WV D +AR L R +I +Y V N K +S P HP + RS+ ++L+ F
Sbjct: 182 WVSDARARCLDETTRKSIVEYLDVLGSRLNRQGKNLLSLKRPFHPHVERSF-DLLKNEFV 240
Query: 243 EKLLLSQNLFSTE---------ERYEKILSMIPDESVTSELRGKW--QENRRSSNSK-ED 290
+ +L Q+ ++T E+ E +LS +P++ + ELR KW Q + +S SK ED
Sbjct: 241 DIILKEQDPWNTSSSEPSDKSWEQVETLLSYVPEKPLQEELRRKWKLQTSVSTSMSKWED 300
Query: 291 INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
I + LK+ + +V L ++I+ + YPRLD+EVSK HLLK+PFCVHP
Sbjct: 301 ITVIAKKILKH-----QNQVNALNEAKKDIILFYMYPRLDIEVSKQLIHLLKSPFCVHPS 355
Query: 351 TGRVCIPIDP----KDCEE-----FDPTTVPTLSELLRELNTGD-SRMDVD--------- 391
TG +C+P DP + EE F+PT P L +L E+ D R++ D
Sbjct: 356 TGNICVPFDPHHNLSNNEEDDDYGFNPTNAPNLRQLQNEIEVWDVRRVNRDSSQPLEDGE 415
Query: 392 -------NEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQT 433
+E+EKTSL + +F+ F+ LLK E +SG + + T
Sbjct: 416 SEADKRISEYEKTSLKPYVEYFQ-KFVNNLLKD--ELKDSGKRGRDDDT 461
>gi|320583556|gb|EFW97769.1| DNA primase small subunit [Ogataea parapolymorpha DL-1]
Length = 429
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/389 (38%), Positives = 232/389 (59%), Gaps = 33/389 (8%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+ YY P I+ W++ H ++ F REF+F + Y R+ SF+S +E
Sbjct: 44 MAYYYEHFLPFKSIYLWLN------HSQAAQADFTMREFAFEYKSGAYQRYNSFHSATEF 97
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ S+ + P++ ++G VY V+P R + ++ + P+ +EL+ DID+TDYDDVR CCS
Sbjct: 98 KQSVVKAQPTRFEVGAVYPVEPRMRKSVSKA---LMKPIAKELVLDIDLTDYDDVRTCCS 154
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G ++C +CW +T+A+K++ AL++DFGF+H++WV+SGRRGVHCWV D +AR L +R
Sbjct: 155 GTEICPKCWRFITLAVKIVHRALQEDFGFEHLVWVFSGRRGVHCWVSDYRARILDETRRR 214
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
AI +Y V + S K ++ P HP + R++ EVLR+ F E +L Q+ +S +R E
Sbjct: 215 AIVEYLDVL--SVKSKKTLNLKKPYHPHVERAF-EVLRDEFVEVILKQQDPWSLPDRAEA 271
Query: 261 ILSMIPDESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
+ +PD ++S L W+E R S+ D++ F ++QL K + L+ +
Sbjct: 272 LARTVPDYKLSSALIRHWKEVPGRTSAEKWLDVDAF-YQQL-------KVRSFDLQDWKK 323
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP-TTVPTLSEL 377
E +FA YPRLD+EVS+ NHLLK+PFCVHP TG VC+P DP + ++FDP P L L
Sbjct: 324 ETIFATMYPRLDVEVSRQMNHLLKSPFCVHPGTGNVCVPFDPSE-KDFDPFADTPNLGVL 382
Query: 378 LRELNTGDSRMDVDNEWEKTSLGKSIRFF 406
+ +G++ EW+KT L S+ F
Sbjct: 383 ---VGSGET------EWQKTGLRHSVELF 402
>gi|255723459|ref|XP_002546663.1| DNA primase small subunit [Candida tropicalis MYA-3404]
gi|240130794|gb|EER30357.1| DNA primase small subunit [Candida tropicalis MYA-3404]
Length = 455
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 238/428 (55%), Gaps = 49/428 (11%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
+K YY RL P +F+W+S+ P D F REF++ N IY R+ SF + E
Sbjct: 27 MKFYYERLLPFRYVFQWLSHSP---KPTKD---FTMREFAYEYRNKIYQRYNSFGTLEEF 80
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ S+ P++ ++G VY ++P +R + F P +EL+FDID+TDYDD+R CC
Sbjct: 81 KKSVVTANPTRFEVGAVYKINPKERKNLPKTA---FKPESKELVFDIDLTDYDDIRTCCQ 137
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G D+C +CW + V K+I+TALR+DFGF+H++WV+SGRRG HCW+ D +AR L R
Sbjct: 138 GTDICCKCWKFIQVGSKIIETALREDFGFEHMVWVFSGRRGAHCWISDKRARELDESSRR 197
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE----- 255
AI +Y V G + ++ PLHP + R++ E++++ F +L Q+ + T+
Sbjct: 198 AIVEYLDVL-GAKTQQGTLNLRKPLHPHVERAF-EIVKKEFATVILQEQDPWGTQPGQEA 255
Query: 256 -----ERYEKILSMIPDESVTSELRGKWQENRRSSNSK---EDINFFRWEQLKNTLQSGK 307
++ E++L IP + + ELR KW+ ++ S+S+ +DIN + LK+ Q
Sbjct: 256 ESKAWKQTEELLKFIPSKPLQIELRNKWKASKSYSSSQDKWDDINKVASQVLKSNAQ--- 312
Query: 308 QKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK------ 361
V L ++I+ + YPRLD++VSK HLLK+PFC+HP TG VC+P DP
Sbjct: 313 --VSTLNDSKKDIIIYYMYPRLDVQVSKQVIHLLKSPFCIHPGTGNVCVPFDPSSNISGN 370
Query: 362 ---DCEEFDPTTVPTLSELLRELNTGDSRMDVDNE----------WEKTSLGKSIRFFRS 408
D F+P T P L L EL T + + E +++TSL I +F +
Sbjct: 371 PADDDYGFNPMTAPNLRLLQTELETWEDNHKDNVEPNNSTTRLPDYDRTSLKPYIDYF-A 429
Query: 409 SFLQPLLK 416
F+ LLK
Sbjct: 430 KFVNNLLK 437
>gi|82596174|ref|XP_726153.1| DNA primase small subunit [Plasmodium yoelii yoelii 17XNL]
gi|23481440|gb|EAA17718.1| DNA primase small subunit [Plasmodium yoelii yoelii]
Length = 435
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 171/429 (39%), Positives = 243/429 (56%), Gaps = 45/429 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGND--GRHPAC-DKSYFGRREFSFTLD------NDIYLRF 71
L YY L P D+ W++Y ND G++ D ++F +REFSFT ++IY+R+
Sbjct: 17 LIFYYRNLCPINDLCNWLNYKNDNNGKYTRLNDPNFFSKREFSFTCKKGDQGKDEIYMRW 76
Query: 72 QSFNSESELENSIKEK-CPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDIT 130
SFNS +E ++ + P K DIG VY+ +++ Q GD+ F P+++ELIFDID+
Sbjct: 77 LSFNSANEFKDKLLSNFVPIKFDIGAVYNYPVSQKD---QKGDS-FRPIQKELIFDIDMN 132
Query: 131 DYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGK 190
DYDD+R CCS VC CW +T+AI ++DT+LR+DF F +ILWVYSGRRG+HCWVCD
Sbjct: 133 DYDDIRTCCSDKKVCKLCWKFLTIAIVLLDTSLREDFAFQNILWVYSGRRGIHCWVCDES 192
Query: 191 ARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQ 249
R T + R A+ADY + G++ KKVS G +P R++ + F + LL Q
Sbjct: 193 CRHYTTDARAALADYLNILSGSDTKKKKVSIWGKEKYPMFERAFDICYKYF--DVLLEEQ 250
Query: 250 NLFST-EERYEKILSMIPDESVTSELRGKWQENRRSSNSKE--DINFFRWEQLKNTLQS- 305
+ F +KI +P TS ++ R + KE D N F +QL L +
Sbjct: 251 DFFKKGSPHVQKIFDYLP---YTSGKNADPVKSARVNEFKEFVDNNNFNSKQLFEKLSTI 307
Query: 306 -----------GKQKVQG--LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
K+ Q + ++EIVF FTYPRLD+ VSK NHLLK+PFC+H TG
Sbjct: 308 YGFSVPINYFKKKEANQNPVIPSYIKEIVFHFTYPRLDINVSKEINHLLKSPFCIHNGTG 367
Query: 353 RVCIPIDPKDCEEFDPTTVPTLSE-------LLRELNTGDSRMDVDNEWEKTSLGKSIRF 405
RVC+PID K ++F+P VPTLS LLRE +D E+ +TSL + +
Sbjct: 368 RVCVPIDIKQIDKFNPQLVPTLSRFITIIVILLREQFDDPQNSHIDTEY-RTSLKSYVDY 426
Query: 406 FRSSFLQPL 414
FR +F++ +
Sbjct: 427 FRHNFVENI 435
>gi|344232432|gb|EGV64311.1| p48 polypeptide of DNA primase [Candida tenuis ATCC 10573]
Length = 455
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 243/441 (55%), Gaps = 53/441 (12%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY RL P +F+W+ N P D F REF++ Y R+ SF S+ +
Sbjct: 26 MRFYYSRLLPFRYVFQWL---NHSPKPTKD---FTMREFAYEHRTGAYQRYNSFTSQEDF 79
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+NS+ P++ +IG VYSV+P +R + N P+ +EL+FDID+TDYDD+R CCS
Sbjct: 80 KNSVVSANPTRFEIGAVYSVNPKERKNLPK---NALKPLAKELVFDIDLTDYDDIRTCCS 136
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G D+C +CW + VA K+IDTALR+DFGF H++WV+SGRRG HCW+ D +AR L R
Sbjct: 137 GTDICKKCWKFINVATKIIDTALREDFGFKHLIWVFSGRRGAHCWISDKRARELDETVRR 196
Query: 201 AIADYFRVY--KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF-STEER 257
+I +Y + K + + ++ P HP + RS+ +L+ F E +L Q+ + + +E
Sbjct: 197 SIVEYLDILGSKQLKMGKQSLNLKRPFHPHIERSFN-LLKGDFIEIILEDQDPWRNNQEH 255
Query: 258 YEKILSMIPDESVTSELR-GKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
+++LS IP++S+ +L+ ++ S EDIN + LKN +Q + L
Sbjct: 256 IDELLSFIPEKSLQEDLQSQWKGKSSSSKQKWEDINVTARKLLKNQVQ-----LNMLNEA 310
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK---------DCEEFD 367
++I+ + YPRLD+EVSK HLLK+PFC+HP TG +C+P DP D F+
Sbjct: 311 KKDIIIFYLYPRLDIEVSKQVIHLLKSPFCIHPSTGNICVPFDPHSNISGNKDDDSYGFN 370
Query: 368 PTTVPTLSELLRELNTGDSRMDVDN---------------------EWEKTSLGKSIRFF 406
P P L +L EL D+R D+ ++EKTSL + +F
Sbjct: 371 PMNAPNLRKLQDELEIWDTRRVSDSSQTLASEYDISDSEANDRRLADYEKTSLKPYVNYF 430
Query: 407 RSSFLQPLLKSCKEEMESGYK 427
+ F+ L+ K+E+ S K
Sbjct: 431 -AKFVNGLV---KDELSSASK 447
>gi|344232433|gb|EGV64312.1| hypothetical protein CANTEDRAFT_114015 [Candida tenuis ATCC 10573]
Length = 440
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 243/441 (55%), Gaps = 53/441 (12%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY RL P +F+W+ N P D F REF++ Y R+ SF S+ +
Sbjct: 11 MRFYYSRLLPFRYVFQWL---NHSPKPTKD---FTMREFAYEHRTGAYQRYNSFTSQEDF 64
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+NS+ P++ +IG VYSV+P +R + N P+ +EL+FDID+TDYDD+R CCS
Sbjct: 65 KNSVVSANPTRFEIGAVYSVNPKERKNLPK---NALKPLAKELVFDIDLTDYDDIRTCCS 121
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
G D+C +CW + VA K+IDTALR+DFGF H++WV+SGRRG HCW+ D +AR L R
Sbjct: 122 GTDICKKCWKFINVATKIIDTALREDFGFKHLIWVFSGRRGAHCWISDKRARELDETVRR 181
Query: 201 AIADYFRVY--KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF-STEER 257
+I +Y + K + + ++ P HP + RS+ +L+ F E +L Q+ + + +E
Sbjct: 182 SIVEYLDILGSKQLKMGKQSLNLKRPFHPHIERSFN-LLKGDFIEIILEDQDPWRNNQEH 240
Query: 258 YEKILSMIPDESVTSELR-GKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRC 316
+++LS IP++S+ +L+ ++ S EDIN + LKN +Q + L
Sbjct: 241 IDELLSFIPEKSLQEDLQSQWKGKSSSSKQKWEDINVTARKLLKNQVQ-----LNMLNEA 295
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK---------DCEEFD 367
++I+ + YPRLD+EVSK HLLK+PFC+HP TG +C+P DP D F+
Sbjct: 296 KKDIIIFYLYPRLDIEVSKQVIHLLKSPFCIHPSTGNICVPFDPHSNISGNKDDDSYGFN 355
Query: 368 PTTVPTLSELLRELNTGDSRMDVDN---------------------EWEKTSLGKSIRFF 406
P P L +L EL D+R D+ ++EKTSL + +F
Sbjct: 356 PMNAPNLRKLQDELEIWDTRRVSDSSQTLASEYDISDSEANDRRLADYEKTSLKPYVNYF 415
Query: 407 RSSFLQPLLKSCKEEMESGYK 427
+ F+ L+ K+E+ S K
Sbjct: 416 -AKFVNGLV---KDELSSASK 432
>gi|221059683|ref|XP_002260487.1| small subunit DNA primase [Plasmodium knowlesi strain H]
gi|193810560|emb|CAQ41754.1| small subunit DNA primase, putative [Plasmodium knowlesi strain H]
Length = 450
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 172/431 (39%), Positives = 250/431 (58%), Gaps = 43/431 (9%)
Query: 21 LKVYYGRLFPHADIFKWMSYGND--GRHPAC-DKSYFGRREFSFTLD------NDIYLRF 71
L YY L P D+ W++Y ND G++ D +F +REFSFT ++IYLR+
Sbjct: 17 LIFYYRNLCPINDLCNWLNYKNDIKGKYTKLNDPHFFAKREFSFTCKKNDQGKDEIYLRW 76
Query: 72 QSFNSESEL-ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDIT 130
SFN+ E E + P K DIG VY+ ++ Q GD +F PV++ELIFDID+
Sbjct: 77 LSFNNSEEFKEKLLSNLVPIKFDIGAVYNYPVYQKD---QKGD-IFHPVQKELIFDIDMN 132
Query: 131 DYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGK 190
DYDD+R CC+ VC CW +T+AI ++DTALR+DF +ILWVYSGRRG+HCWVCD
Sbjct: 133 DYDDIRTCCNDKKVCKLCWKFLTIAIVLLDTALREDFALQNILWVYSGRRGIHCWVCDES 192
Query: 191 ARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQ 249
R T + R A+ADY + G + KKVS G +P + R++ E+ ++F + L+ Q
Sbjct: 193 CRYYTTDARAALADYLNILSGPDTKKKKVSIWGKEKYPMIERAF-EICYKYF-DILMEEQ 250
Query: 250 NLFST-EERYEKILSMIP------DESVTSELRGKWQE--NRRSSNSKEDINFFRWEQLK 300
+ F KI+ +P + V S ++++ +R + NSK+ +E+L
Sbjct: 251 DFFKKGSPHVNKIMDYLPYVTAKNVDPVKSARLSEFKQFIDRNNFNSKD-----LFEKLS 305
Query: 301 NTLQ----SGKQKVQGLRRCV------EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
+ S K + R V +E+VF FTYPRLD+ VSK NHLLK+PFC+H
Sbjct: 306 SIYSFPTPSNYFKKKDANRNVTVPPFIKELVFHFTYPRLDINVSKEINHLLKSPFCIHNG 365
Query: 351 TGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSF 410
TGRVC+P++ K+ + F+P VPTL +LLRE VD E+ +TSL + + +FR +F
Sbjct: 366 TGRVCVPLNIKNIDNFNPQFVPTL-KLLREQFDDPQNAHVDPEY-RTSLKQYVDYFRQNF 423
Query: 411 LQPLLKSCKEE 421
L+ +L SC ++
Sbjct: 424 LENILLSCADK 434
>gi|385304207|gb|EIF48234.1| dna primase small subunit [Dekkera bruxellensis AWRI1499]
Length = 428
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 221/399 (55%), Gaps = 27/399 (6%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY P+ IF W+ N + P D F +REF+F + Y R+ SF + E ++
Sbjct: 44 YYEYFMPYKSIFLWL---NHSQAPQDD---FTKREFAFEYKSGAYQRYNSFENAKEFRDT 97
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ + P + ++G VY V P ++ P +E + DID+TDYDD+R CCSG
Sbjct: 98 VVKAKPVRFEVGAVYPVAPKLHKTVSKSX---MKPQMKEFVLDIDLTDYDDIRTCCSGTK 154
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+C +CW +T+AIK++D+ALR+DFGF ++WV+SGRRGVHCW+ D + R L +R AI
Sbjct: 155 ICPKCWKFITLAIKIVDSALREDFGFKKLIWVFSGRRGVHCWISDYRVRVLDESRRRAIV 214
Query: 204 DYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILS 263
+Y V + +S P HP L RS+ +LR+ F + ++ Q+ + E+RY+++
Sbjct: 215 EYLDVLNVKSKNKAGISLRKPYHPHLERSFN-ILRDNFVDVVIREQDPWRFEDRYKELAR 273
Query: 264 MIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFA 323
IPD ++S L W+E+ SS++ +W + K K L+ E++F
Sbjct: 274 NIPDYRLSSALLKHWKEDPSSSSAT------KWRDVDRLYDEMKVKSFNLQDWKREMIFK 327
Query: 324 FTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP-TTVPTLSELLRELN 382
YPRLD+EVS+ HLLK+PFC+HP TG VC+P DP + +EF+P T P LS++ E
Sbjct: 328 TMYPRLDVEVSRQMIHLLKSPFCIHPGTGNVCVPFDPTE-KEFNPFTDAPNLSQIFNEDE 386
Query: 383 TGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
T +W KTSL I FF Q + KE+
Sbjct: 387 T---------DWAKTSLKGPIDFFNRYVNQLVKDETKEK 416
>gi|50546577|ref|XP_500758.1| YALI0B11396p [Yarrowia lipolytica]
gi|49646624|emb|CAG83005.1| YALI0B11396p [Yarrowia lipolytica CLIB122]
Length = 441
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 233/422 (55%), Gaps = 32/422 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYG-NDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESE 79
L ++Y R FP + +W+++ +GR F REF+FTL N YLRF SF E E
Sbjct: 35 LGLFYSRFFPFKTLHRWLNHSPRNGRD-------FAYREFAFTLRNGAYLRFNSFAEERE 87
Query: 80 LENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCC 139
++ + + P + +IG VYS P R + +VF PV +EL+FDID+ DYD R CC
Sbjct: 88 FKSRVDDLVPERFEIGAVYSHSPKDRKKLRK---DVFKPVSKELVFDIDMDDYDKFRTCC 144
Query: 140 SGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQR 199
SGA VC +CW + VA+K++++AL++DFG+ HI+WV+SGRRG H WV D KAR L + QR
Sbjct: 145 SGASVCNKCWRYVQVAVKMVNSALKEDFGYKHIMWVFSGRRGAHAWVSDKKARDLNDRQR 204
Query: 200 GAIADYFRVY--KGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
+ Y + ++++ S PLHP L R ++ F E +L +Q+ ++ EE
Sbjct: 205 STVVSYIAAFGDATDKSAAGNSSLRRPLHPHLQRCL-DIATTVFNEVVLQTQDPWANEEG 263
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
+ +L+ IPDE + L KW++N S++S + +W + SG +R V
Sbjct: 264 SKFLLAFIPDEKLRRALAEKWKKNGDSASSAD-----KWSDIDKVASSGVSANLDTKRLV 318
Query: 318 E---EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEE---FDPTTV 371
E ++ P+LD VS+ HLLK+PFC+HPKT VC+P+D F P
Sbjct: 319 EAKQNVILTVFMPKLDGAVSRGTGHLLKSPFCIHPKTSNVCVPMDVDSHTHELLFTPEDC 378
Query: 372 PTLSELLRELNT--GDSRMDVDNEW-EKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
P L E++ + N GD++ V +KT L + F +F++PLL KEE+E A
Sbjct: 379 PKLQEIIDDFNNYEGDAQGTVSKHASDKTRLKPFVEVF-DNFVEPLL---KEEIERVKAA 434
Query: 429 KI 430
+
Sbjct: 435 NV 436
>gi|294924536|ref|XP_002778830.1| DNA primase small subunit, putative [Perkinsus marinus ATCC 50983]
gi|239887634|gb|EER10625.1| DNA primase small subunit, putative [Perkinsus marinus ATCC 50983]
Length = 430
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 240/410 (58%), Gaps = 37/410 (9%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDG--RHPACDKS-YFGRREFSFTLDNDIYLRFQS 73
P L++YY RLFP D +W+SY DG A DK + RREFSFTL DIY R+ S
Sbjct: 22 TPEALRIYYERLFPSRDFCRWLSYREDGPGGKVAADKGGFLFRREFSFTLPGDIYCRYLS 81
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV--FAPVERELIFDIDITD 131
F+ + + ++ ++ P KIDIG V+++ P + G + F P +REL+FDID+ D
Sbjct: 82 FHGQHDFRKALLDRVPDKIDIGAVFNIPPTHYQQFGLTGGSGGGFQPQQRELVFDIDMDD 141
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YDDVR CC G+ +C CW + A+K+++ ALRDDFGF HIL+V+SGRRGVHCWVCD A
Sbjct: 142 YDDVRNCCKGSSICKLCWTFIACAVKILNRALRDDFGFKHILFVFSGRRGVHCWVCDETA 201
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF---EEKLLLS 248
R+L+NEQR A+A+Y ++ G + + S HP VR ++ R++ E LL
Sbjct: 202 RKLSNEQRSAVAEYLQLLNGGRCKHIRSS-AQQRHPH-VRRGIDICRKYLLMPECGLLEG 259
Query: 249 QNLFST-------EERYEKIL-SMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLK 300
Q L + +K++ ++IP RG+ + S S ++ W+ L
Sbjct: 260 QRLLDAPMVEGGDKNLLQKVVNTVIPATDPVG--RGEAKSFLSSKRSSREV----WQWLT 313
Query: 301 NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIP-ID 359
+ ++EIV YPRLD+ VSK NHLLKAPFC+HPKTGRVC+P ID
Sbjct: 314 ARCSNSV--------LLDEIVLEMAYPRLDINVSKQMNHLLKAPFCIHPKTGRVCVPIID 365
Query: 360 PKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSS 409
+ E F+P +VPT+++L+ EL SR + D E ++TSL K + +FR S
Sbjct: 366 VEKPESFNPASVPTVAQLISELA---SRKEDDGE-KQTSLAKYLTYFRKS 411
>gi|156100553|ref|XP_001616004.1| DNA primase small subunit [Plasmodium vivax Sal-1]
gi|148804878|gb|EDL46277.1| DNA primase small subunit, putative [Plasmodium vivax]
Length = 469
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/457 (37%), Positives = 253/457 (55%), Gaps = 52/457 (11%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPAC---DKSYFGRREFSFTLDN 65
G + N L YY L P D+ W++Y ND + D +F +REFSFT
Sbjct: 5 GEIKDSTVNETDLIFYYRNLCPINDLCNWLNYKNDNKGKYTRLNDPHFFAKREFSFTCKK 64
Query: 66 D------IYLRFQSFNSESELENSIKEK-CPSKIDIGPVYSVDPAKRHAYAQGGDNVFAP 118
+ IY+R+ SFN+ E ++ + P K DIG VY+ ++ Q GD +F P
Sbjct: 65 NDQGKEEIYMRWLSFNNSEEFKDKLLSNFVPIKFDIGAVYNYPVYQKD---QKGD-IFHP 120
Query: 119 VERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSG 178
V++ELIFDID+ DYDD+R CC+ VC CW +T+AI ++DTALR+DF +ILWVYSG
Sbjct: 121 VQKELIFDIDMNDYDDIRTCCNDKKVCKLCWKFLTIAIVLLDTALREDFALQNILWVYSG 180
Query: 179 RRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVL 237
RRG+HCWVCD R T + R A+ADY + G++ KKVS G +P + R++ E+
Sbjct: 181 RRGIHCWVCDESCRHYTTDARAALADYLNILSGSDMKKKKVSIWGKEKYPMIERAF-EIC 239
Query: 238 REFFEEKLLLSQNLFST-EERYEKILSMIPDES------VTSELRGKWQENRRSSNSKED 290
++F E L+ Q+ F KI+ +P + + S +++E ++N
Sbjct: 240 YKYF-EILMEEQDFFKKGSPHVNKIIDYLPYATAKNVDPLKSAKINEFKEFIDNNNFNSK 298
Query: 291 INFFRWEQLKNTLQSG---KQKVQG----LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKA 343
F + + L G K+K + ++E+VF FTYPRLD+ VSK NHLLK+
Sbjct: 299 ELFEKLSSIYGFLTPGNYFKKKDSNANIIIPSYIKELVFHFTYPRLDINVSKEINHLLKS 358
Query: 344 PFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLREL------NTGDS----------- 386
PFC+H TGRVC+P++ K+ + F+P VPTL +LLRE G+S
Sbjct: 359 PFCIHNGTGRVCVPLNIKNIDNFNPQLVPTL-KLLREQFDDPQNAQGESPNEDNFEMQHM 417
Query: 387 --RMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
+++VD E+ +TSL I +FR +FL+ +L +C ++
Sbjct: 418 FEKINVDPEY-RTSLKLYIDYFRQNFLENILLTCADK 453
>gi|146184063|ref|XP_001027694.2| DNA primase, eukaryotic-type, small subunit, putative family
protein [Tetrahymena thermophila]
gi|146143385|gb|EAS07452.2| DNA primase, eukaryotic-type, small subunit, putative family
protein [Tetrahymena thermophila SB210]
Length = 399
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 220/390 (56%), Gaps = 49/390 (12%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ L+ YY FP + + +W+SY DG D +YF RREFSFTL N++YLR+Q +NSE
Sbjct: 21 DLLEEYYRSYFPVSQMVQWLSYPQDG-----DDTYFTRREFSFTLQNEVYLRYQMYNSER 75
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
E +N++ +K P KIDIG VY P K+ GD++ A E+E + DID+TDYD +R C
Sbjct: 76 EFKNALLQKVPEKIDIGAVYD-RPGKK------GDDIKAK-EKEFVIDIDMTDYDHIRTC 127
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
CS A +C +CW M VA +I +L +DFGF H+LWVYSGRRG+H WVCD + R+ +
Sbjct: 128 CSKAKICEKCWKFMRVACDLISKSLDEDFGFQHVLWVYSGRRGIHAWVCDKEIRKANDYT 187
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLH----PFLVRSYTEVLRE-------------FF 241
R +I DY + N + V P L + R+ + L + F
Sbjct: 188 RASIIDYLNILVDNSIGSSYVK-PSLLKMEKSHLIERNAMKQLNQKNDDLKAEKESEKVF 246
Query: 242 EEKLLLSQNLFSTEERYEKILSMIP--DESVTSELRGKWQENRRSSNSKEDINFFRWEQL 299
E +L QNLF ++ E IL + E+++ E+ +W+ + S R+E L
Sbjct: 247 VEIVLREQNLFM--KKPEIILEFLAKRSENLSKEVEKEWKTLKTSEQ--------RYEAL 296
Query: 300 KNTLQS-GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
K + S K+K L +EE+ YPRLD+ VSK NHLLK+PFC+HPKTG VC+P
Sbjct: 297 KELVSSEDKKKTHYL---LEELRIWLLYPRLDVNVSKSTNHLLKSPFCIHPKTGNVCVPF 353
Query: 359 DPKDCEEFDPTTVPTLSELLRELNTGDSRM 388
++ FDP +VP +S L E G S+M
Sbjct: 354 TTEEISTFDPFSVPNISTLTTE--EGSSKM 381
>gi|149029726|gb|EDL84897.1| DNA primase, p49 subunit [Rattus norvegicus]
Length = 271
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 178/259 (68%), Gaps = 10/259 (3%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P++ + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPSQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+A+++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG + KKV +HPF VR +++++FEE L+ Q++ +E
Sbjct: 181 VRSGIVEYLSLIKGGHDVKKKVHLNEKVHPF-VRKSINIIKKYFEEYALVDQDILENKEN 239
Query: 258 YEKILSMIPDESVTSELRG 276
++KIL+++P+ + S +G
Sbjct: 240 WDKILALVPENFMMSCKKG 258
>gi|50304201|ref|XP_452050.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641182|emb|CAH02443.1| KLLA0B11682p [Kluyveromyces lactis]
Length = 436
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 245/438 (55%), Gaps = 33/438 (7%)
Query: 9 GNVIPDGFNPNY--LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDND 66
G+ P + P+ ++ YY L+P IF+W+ N P D REF+ +
Sbjct: 25 GDTPPSNYGPSSSDMQYYYQHLYPFKQIFQWL---NHSPKPGRD---IINREFAMAFRSG 78
Query: 67 IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFD 126
Y R+ SFNS E + I++ P + +IG VY+ P +R + + P+E+EL+FD
Sbjct: 79 AYKRYNSFNSVQEFKVQIQKANPDRFEIGAVYNKPPRERDSLLKTE---MKPMEKELVFD 135
Query: 127 IDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
ID+ DYD R CCSGA VC +CW + +A+KVI+++L +DFGFD +WV+SGRRG HCW+
Sbjct: 136 IDMDDYDSYRTCCSGAQVCPKCWHFIKLAMKVINSSLENDFGFDEFIWVFSGRRGAHCWI 195
Query: 187 CDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLL 246
D +AR +T+ R + DY V + + N K+++ PLHP L RS E+L+ F E +L
Sbjct: 196 SDKRARVMTDSHRKNMLDYMNVVR-DRNIEKRLNLVRPLHPHLSRS-LEILKPHFVEIIL 253
Query: 247 LSQNLFSTEERYEKILSM-IPDESVTSELRGKW--QENRRSSNSKEDINFFRWEQLKNTL 303
Q+ + +E K L+ D+ ++ +L+ W + R S +D++ QL ++
Sbjct: 254 REQDTWRDDELAIKSLATSCHDKQLSEQLKKLWTNKPGRSSEEKWKDMDVIA-SQLISSF 312
Query: 304 QSGKQK--VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK 361
+Q +Q LR E+I+ YP+LD+EV+K HLLKAPFC+HP TG VC+PI
Sbjct: 313 PKQRQHDYLQRLRESKEDIIIQTLYPKLDVEVTKQTIHLLKAPFCIHPSTGNVCVPI--- 369
Query: 362 DCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
EEF P P L +L E++T DN+ ++TSL + F ++ L+ K+E
Sbjct: 370 -TEEFSPEMAPKLIKLQNEMDTN------DNQVQRTSLQPYLDMF-GKYVNKLV---KQE 418
Query: 422 MESGYKAKIQQTKNSLSW 439
+ S + + + K+S+ +
Sbjct: 419 LSSQKRDREEDIKSSIDF 436
>gi|349578959|dbj|GAA24123.1| K7_Pri1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 409
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/422 (37%), Positives = 237/422 (56%), Gaps = 32/422 (7%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIY 68
+V +G + + ++ YY L+P IF W+ N P+ D REF+ + Y
Sbjct: 3 NSVKSNGPSSSDMEYYYKSLYPFKHIFNWL---NHSPKPSRD---MINREFAMAFRSGAY 56
Query: 69 LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDID 128
R+ SFNS + + I++ P + +IG +Y+ P +R + +E+EL+FDID
Sbjct: 57 KRYNSFNSVQDFKAQIEKANPDRFEIGAIYNKPPRERDTLLKSE---LKALEKELVFDID 113
Query: 129 ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
+ DYD R CCSGA VC +CW +++A+K+++TALR+DFG+ +WV+SGRRG HCWV D
Sbjct: 114 MDDYDAFRTCCSGAQVCSKCWKFISLAMKIMNTALREDFGYKDFIWVFSGRRGAHCWVSD 173
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
+AR LT+ QR + DY V + + N++K+++ P HP L RS E L+ FF +L
Sbjct: 174 KRARALTDVQRRNVLDYVNVIR-DRNTDKRLALKRPYHPHLARS-LEQLKPFFVSIMLEE 231
Query: 249 QNLFSTEER-YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
QN + ++ + +L + D+ + L+ W +N R S SKE N +Q+ +L G
Sbjct: 232 QNPWEDDQHAIQTLLPALYDKQLIDSLKKYWLDNPRRS-SKEKWNDI--DQIATSLFKGP 288
Query: 308 QK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
++ + LR C E++V YP+LD+EV+K HLLKAPFC+HP TG VC+PID E
Sbjct: 289 KQDSHIIKLRECKEDLVLMTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPID----E 344
Query: 365 EFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFR---SSFLQPLLKSCKEE 421
F P P L +L E M+ +N+ T+L I F+ SS L+ L S K E
Sbjct: 345 SFAPEKAPKLIDLQTE-------MEKNNDVSLTALQPFINQFQAYVSSLLKNELGSVKRE 397
Query: 422 ME 423
E
Sbjct: 398 RE 399
>gi|151943167|gb|EDN61502.1| DNA primase p48 polypeptide [Saccharomyces cerevisiae YJM789]
gi|190406215|gb|EDV09482.1| DNA primase p48 polypeptide [Saccharomyces cerevisiae RM11-1a]
gi|256274129|gb|EEU09039.1| Pri1p [Saccharomyces cerevisiae JAY291]
gi|259147267|emb|CAY80520.1| Pri1p [Saccharomyces cerevisiae EC1118]
gi|323304473|gb|EGA58242.1| Pri1p [Saccharomyces cerevisiae FostersB]
gi|323333074|gb|EGA74475.1| Pri1p [Saccharomyces cerevisiae AWRI796]
gi|323337229|gb|EGA78483.1| Pri1p [Saccharomyces cerevisiae Vin13]
gi|323354515|gb|EGA86352.1| Pri1p [Saccharomyces cerevisiae VL3]
gi|365765031|gb|EHN06546.1| Pri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 409
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/422 (37%), Positives = 237/422 (56%), Gaps = 32/422 (7%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIY 68
+V +G + + ++ YY L+P IF W+ N P+ D REF+ + Y
Sbjct: 3 NSVKTNGPSSSDMEYYYKSLYPFKHIFNWL---NHSPKPSRD---MINREFAMAFRSGAY 56
Query: 69 LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDID 128
R+ SFNS + + I++ P + +IG +Y+ P +R + +E+EL+FDID
Sbjct: 57 KRYNSFNSVQDFKAQIEKANPDRFEIGAIYNKPPRERDTLLKSE---LKALEKELVFDID 113
Query: 129 ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
+ DYD R CCSGA VC +CW +++A+K+++TALR+DFG+ +WV+SGRRG HCWV D
Sbjct: 114 MDDYDAFRTCCSGAQVCSKCWKFISLAMKIMNTALREDFGYKDFIWVFSGRRGAHCWVSD 173
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
+AR LT+ QR + DY V + + N++K+++ P HP L RS E L+ FF +L
Sbjct: 174 KRARALTDVQRRNVLDYVNVIR-DRNTDKRLALKRPYHPHLARS-LEQLKPFFVSIMLEE 231
Query: 249 QNLFSTEER-YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
QN + ++ + +L + D+ + L+ W +N R S SKE N +Q+ +L G
Sbjct: 232 QNPWEDDQHAIQTLLPALYDKQLIDSLKKYWLDNPRRS-SKEKWNDI--DQIATSLFKGP 288
Query: 308 QK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
++ + LR C E++V YP+LD+EV+K HLLKAPFC+HP TG VC+PID E
Sbjct: 289 KQDSHIIKLRECKEDLVLMTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPID----E 344
Query: 365 EFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFR---SSFLQPLLKSCKEE 421
F P P L +L E M+ +N+ T+L I F+ SS L+ L S K E
Sbjct: 345 SFAPEKAPKLIDLQTE-------MEKNNDVSLTALQPFINQFQAYVSSLLKNELGSVKRE 397
Query: 422 ME 423
E
Sbjct: 398 RE 399
>gi|367017712|ref|XP_003683354.1| hypothetical protein TDEL_0H02840 [Torulaspora delbrueckii]
gi|359751018|emb|CCE94143.1| hypothetical protein TDEL_0H02840 [Torulaspora delbrueckii]
Length = 416
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 232/422 (54%), Gaps = 30/422 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY LFP IF W+ N P D REF+ + Y R+ S+NS E
Sbjct: 22 MQYYYQCLFPFKVIFNWL---NHSPKPGRD---IVNREFAMAFRSGAYKRYNSYNSVQEF 75
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ I++ P + +IG +Y+ P +R + P+E+EL+FDID+ DYD R CCS
Sbjct: 76 KTQIEKANPDRFEIGAIYNKAPRERDTILKSE---MKPLEKELVFDIDMDDYDTFRTCCS 132
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC CW +T+A+ V++T L +DF ++ +WV+SGRRG HCWV D +AR L + QR
Sbjct: 133 GAQVCERCWKFITLAMLVVNTTLTEDFAYEDFIWVFSGRRGAHCWVSDKRARILHDLQRR 192
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER-YE 259
+ DY V + + N++K++S P HP LVRS E+L+ F +L QN + +E +
Sbjct: 193 NVLDYVNVVR-DRNADKRLSLKRPYHPHLVRSL-EILKPHFASIILEEQNPWQNDEHAFT 250
Query: 260 KILSMIPDESVTSELRGKWQEN-RRSSNSK-EDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
+L + D+++ LR W EN RSS K DI+ +++K + + + LR C
Sbjct: 251 TLLPCLHDKNLIDALRRYWSENPNRSSKEKWNDIDVIASKEIKTSRK--QDYATRLRECK 308
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
E++V A YP+LD+EV+K HLLK+PFC+HP TG VC+PID K F+P P L L
Sbjct: 309 EDMVIATLYPKLDIEVTKQTIHLLKSPFCIHPSTGNVCVPIDMK----FNPDQAPKLITL 364
Query: 378 LRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQTKNSL 437
E+ N EKTSL I F+ Q + K K +M + + + + + SL
Sbjct: 365 QHEMEQN------GNNVEKTSLQPFIELFQ----QHVNKVMKNDMGTVKRERAEDGETSL 414
Query: 438 SW 439
+
Sbjct: 415 EF 416
>gi|6322198|ref|NP_012273.1| Pri1p [Saccharomyces cerevisiae S288c]
gi|730382|sp|P10363.2|PRI1_YEAST RecName: Full=DNA primase small subunit; AltName: Full=DNA
polymerase alpha:primase complex p48 subunit; Short=DNA
polymerase-primase complex p48 subunit; Short=Pol
alpha-primase complex p48 subunit; AltName: Full=DNA
primase 48 kDa subunit
gi|556854|emb|CAA86078.1| DNA primase small chain [Saccharomyces cerevisiae]
gi|4468674|emb|CAB38098.1| PRI1 protein [Saccharomyces cerevisiae]
gi|51013169|gb|AAT92878.1| YIR008C [Saccharomyces cerevisiae]
gi|285812655|tpg|DAA08554.1| TPA: Pri1p [Saccharomyces cerevisiae S288c]
gi|346228219|gb|AEO21096.1| PRI1 [synthetic construct]
gi|392298731|gb|EIW09827.1| Pri1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 409
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 157/422 (37%), Positives = 236/422 (55%), Gaps = 32/422 (7%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIY 68
+V +G + + ++ YY L+P IF W+ N P+ D REF+ + Y
Sbjct: 3 NSVKTNGPSSSDMEYYYKSLYPFKHIFNWL---NHSPKPSRD---MINREFAMAFRSGAY 56
Query: 69 LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDID 128
R+ SFNS + + I++ P + +IG +Y+ P +R + +E+EL+FDID
Sbjct: 57 KRYNSFNSVQDFKAQIEKANPDRFEIGAIYNKPPRERDTLLKSE---LKALEKELVFDID 113
Query: 129 ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
+ DYD R CCSGA VC +CW +++A+K+ +TALR+DFG+ +WV+SGRRG HCWV D
Sbjct: 114 MDDYDAFRTCCSGAQVCSKCWKFISLAMKITNTALREDFGYKDFIWVFSGRRGAHCWVSD 173
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
+AR LT+ QR + DY V + + N++K+++ P HP L RS E L+ FF +L
Sbjct: 174 KRARALTDVQRRNVLDYVNVIR-DRNTDKRLALKRPYHPHLARSL-EQLKPFFVSIMLEE 231
Query: 249 QNLFSTEER-YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
QN + ++ + +L + D+ + L+ W +N R S SKE N +Q+ +L G
Sbjct: 232 QNPWEDDQHAIQTLLPALYDKQLIDSLKKYWLDNPRRS-SKEKWNDI--DQIATSLFKGP 288
Query: 308 QK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
++ + LR C E++V YP+LD+EV+K HLLKAPFC+HP TG VC+PID E
Sbjct: 289 KQDSHIIKLRECKEDLVLMTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPID----E 344
Query: 365 EFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFR---SSFLQPLLKSCKEE 421
F P P L +L E M+ +N+ T+L I F+ SS L+ L S K E
Sbjct: 345 SFAPEKAPKLIDLQTE-------MEKNNDVSLTALQPFINQFQAYVSSLLKNELGSVKRE 397
Query: 422 ME 423
E
Sbjct: 398 RE 399
>gi|323348090|gb|EGA82345.1| Pri1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 397
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 236/420 (56%), Gaps = 32/420 (7%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIY 68
+V +G + + ++ YY L+P IF W+ N P+ D REF+ + Y
Sbjct: 3 NSVKTNGPSSSDMEYYYKSLYPFKHIFNWL---NHSPKPSRD---MINREFAMAFRSGAY 56
Query: 69 LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDID 128
R+ SFNS + + I++ P + +IG +Y+ P +R + +E+EL+FDID
Sbjct: 57 KRYNSFNSVQDFKAQIEKANPDRFEIGAIYNKPPRERDTLLKSE---LKALEKELVFDID 113
Query: 129 ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
+ DYD R CCSGA VC +CW +++A+K+++TALR+DFG+ +WV+SGRRG HCWV D
Sbjct: 114 MDDYDAFRTCCSGAQVCSKCWKFISLAMKIMNTALREDFGYKDFIWVFSGRRGAHCWVSD 173
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
+AR LT+ QR + DY V + + N++K+++ P HP L RS E L+ FF +L
Sbjct: 174 KRARALTDVQRRNVLDYVNVIR-DRNTDKRLALKRPYHPHLARS-LEQLKPFFVSIMLEE 231
Query: 249 QNLFSTEER-YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
QN + ++ + +L + D+ + L+ W +N R S SKE N +Q+ +L G
Sbjct: 232 QNPWEDDQHAIQTLLPALYDKQLIDSLKKYWLDNPRRS-SKEKWNDI--DQIATSLFKGP 288
Query: 308 QK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
++ + LR C E++V YP+LD+EV+K HLLKAPFC+HP TG VC+PID E
Sbjct: 289 KQDSHIIKLRECKEDLVLMTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPID----E 344
Query: 365 EFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFR---SSFLQPLLKSCKEE 421
F P P L +L E M+ +N+ T+L I F+ SS L+ L S K E
Sbjct: 345 SFAPEKAPKLIDLQTE-------MEKNNDVSLTALQPFINQFQAYVSSLLKNELGSVKRE 397
>gi|402886509|ref|XP_003906671.1| PREDICTED: DNA primase small subunit [Papio anubis]
Length = 379
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/324 (43%), Positives = 206/324 (63%), Gaps = 27/324 (8%)
Query: 115 VFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILW 174
F E+EL+FDID+TDYDDVR CCS AD+C +CW LMT+AI++ID AL++DFGF H LW
Sbjct: 57 AFQAQEKELVFDIDMTDYDDVRRCCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLW 116
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYT 234
VYSGRRGVHCWVCD R+L++ R I +Y + KG ++ KKV +HPF +R
Sbjct: 117 VYSGRRGVHCWVCDESVRKLSSAVRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-IRKSI 175
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
+++++FEE L++Q++ +E ++KIL+++P E + EL+ +Q +S NS +
Sbjct: 176 NIIKKYFEEYALVNQDILKNKESWDKILALVP-EIIHDELQQGFQ---KSHNSLQ----- 226
Query: 295 RWEQLKNTLQSGKQKVQGLRR---CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKT 351
RWE LK + ++ + EI+ + +PRLD+ VSK NHLLK+PF VHPKT
Sbjct: 227 RWEHLKKVASRCQNNIKNDKYGPWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKT 286
Query: 352 GRVCIPIDPKDCEEFDPTTVPTLSELLRELNT----------GDSRMDVDN---EWEKTS 398
GR+ +PID + ++FDP TVPT+S + REL+ ++ DV + +++KTS
Sbjct: 287 GRISVPIDLQKVDQFDPFTVPTISFICRELDAISINEEEKEENEAESDVKHRTRDYKKTS 346
Query: 399 LGKSIRFFRSSFLQPLLKSCKEEM 422
L ++ F FL+ L KS K E+
Sbjct: 347 LAPYVKVF-EHFLENLDKSRKGEL 369
>gi|410964973|ref|XP_003989027.1| PREDICTED: DNA primase small subunit [Felis catus]
Length = 371
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 233/421 (55%), Gaps = 85/421 (20%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS + + +F
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYS--------HRSSVEQLF--------------------- 94
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
V+ T L +DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 95 --------------------VLHTVL-EDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 133
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
R I +Y + KG ++ KKV +HPF VR +++++FE+ L+ Q++ +E
Sbjct: 134 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPF-VRKSINIIKKYFEDYALVDQDILENKES 192
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
++KIL+++P E++ +L+ +Q++ S RWE LK T+ S Q +C
Sbjct: 193 WDKILALVP-ETIHEKLQQNFQKHHNSLQ--------RWEYLKKTISS--QDNTKNDKCG 241
Query: 318 E----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPT 373
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT
Sbjct: 242 PWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDVQKVDQFDPFTVPT 301
Query: 374 LSELLRELNT-----GDSRMDVDN-------EWEKTSLGKSIRFFRSSFLQPLLKSCKEE 421
+S + REL+T G R + ++ +++KTSL I+ F FL+ L KS K E
Sbjct: 302 ISSICRELDTISTNEGKERNEAESDIKHRTRDYKKTSLAPYIKVF-EQFLENLDKSRKGE 360
Query: 422 M 422
+
Sbjct: 361 L 361
>gi|4225|emb|CAA68513.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 409
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 236/422 (55%), Gaps = 32/422 (7%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIY 68
+V +G + + ++ YY L+P IF W+ N P+ D REF+ + Y
Sbjct: 3 NSVKTNGPSSSDMEYYYKSLYPFKHIFNWL---NHSPKPSRD---MINREFAMAFRSGAY 56
Query: 69 LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDID 128
R+ SFNS + + I++ P + +IG +Y+ P +R + +E+EL+FDID
Sbjct: 57 KRYNSFNSVQDFKAQIEKANPDRFEIGAIYNKPPRERDTLLKSE---LKALEKELVFDID 113
Query: 129 ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
+ DYD R CCSGA VC +CW +++A+K+ +TALR+DFG+ +WV+SGRRG HCWV D
Sbjct: 114 MDDYDAFRTCCSGAQVCSKCWKFISLAMKITNTALREDFGYKDFIWVFSGRRGAHCWVSD 173
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
+AR LT+ QR + DY V + + N++K+++ P HP L RS E L+ FF +L
Sbjct: 174 KRARALTDVQRRNVLDYVNVIR-DRNTDKRLALKRPYHPHLARSL-EQLKPFFVSIMLED 231
Query: 249 QNLFSTEER-YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
+N + ++ + +L + D+ + L+ W +N R S SKE N +Q+ +L G
Sbjct: 232 ENPWEDDQHAIQTLLPALYDKQLIDSLKKYWLDNPRRS-SKEKWNDI--DQIATSLFKGP 288
Query: 308 QK---VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
++ + LR C E++V YP+LD+EV+K HLLKAPFC+HP TG VC+PID E
Sbjct: 289 KQDSHIIKLRECKEDLVLMTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPID----E 344
Query: 365 EFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFR---SSFLQPLLKSCKEE 421
F P P L +L E M+ +N+ T+L I F+ SS L+ L S K E
Sbjct: 345 SFAPEKAPKLIDLQTE-------MEKNNDVSLTALQPFINQFQAYVSSLLKNELGSVKRE 397
Query: 422 ME 423
E
Sbjct: 398 RE 399
>gi|366994362|ref|XP_003676945.1| hypothetical protein NCAS_0F01060 [Naumovozyma castellii CBS 4309]
gi|342302813|emb|CCC70590.1| hypothetical protein NCAS_0F01060 [Naumovozyma castellii CBS 4309]
Length = 420
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 225/399 (56%), Gaps = 26/399 (6%)
Query: 13 PDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQ 72
P G + + ++ YY L+P IF W+ N P D REF+ + Y R+
Sbjct: 17 PSGPSSSDMEYYYKHLYPFKPIFNWL---NHSVKPGRD---ITNREFAMAFRSGAYKRYN 70
Query: 73 SFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY 132
SFNS E + I++ P + +IG VY+ P R + + P+E+EL+FDID+ DY
Sbjct: 71 SFNSLQEFKAQIEKGNPDRFEIGAVYNKPPRDRDSLLKSE---MKPLEKELVFDIDMDDY 127
Query: 133 DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKAR 192
D R CCSGA VC +CW +++A+KV++ +L +DFG+D +W++SGRRG HCW+ D +AR
Sbjct: 128 DTFRTCCSGAQVCEKCWKFISLAMKVMNVSLEEDFGYDDYIWIFSGRRGAHCWISDKRAR 187
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
L + QR + DY V + + ++K+++ P HP + RS ++L+ FF E +L QN +
Sbjct: 188 ILNDLQRRNVLDYLNVVR-DRTASKRLALKRPYHPHVARSL-DILKPFFVEIILEEQNPW 245
Query: 253 STEER-YEKILSMIPDESVTSELRGKWQEN-RRSSNSK-EDINFFRWEQLKNTLQSGKQK 309
+E + +L + D+ + +L+ W+ N RSS K DI+ ++LK +
Sbjct: 246 EDDEHAIQTLLPGLHDKHLIEQLKVFWKANPNRSSREKWGDIDLLASKELK--ANKKQDA 303
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPT 369
+ LR C E++V A YP+LD+EV+K HLLKAPFC+HP TG VC+PI E F P
Sbjct: 304 INRLRECKEDLVIATLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPI----TESFTPR 359
Query: 370 TVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRS 408
P L +L E+ +NE + TSL I F++
Sbjct: 360 DAPKLLDLQNEMEKN------NNEVKMTSLEPFIEHFQT 392
>gi|291390236|ref|XP_002711634.1| PREDICTED: DNA primase polypeptide 1, partial [Oryctolagus
cuniculus]
Length = 335
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 208/338 (61%), Gaps = 32/338 (9%)
Query: 102 PAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDT 161
P++ + G F E+EL+FDID+TDYDDVR CCS AD+C +CW LMT+AI +ID
Sbjct: 3 PSQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRRCCSSADICSKCWTLMTMAILIIDR 59
Query: 162 ALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSF 221
AL++ FGF H LWVYSGRRGVHCWVCD R+L++ R I +Y + KG ++ KKV
Sbjct: 60 ALKEVFGFKHRLWVYSGRRGVHCWVCDESVRKLSSTVRSGIVEYLSLVKGGQDVKKKVHL 119
Query: 222 PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN 281
+HPF+ RS +++++FEE L+ Q++ +E ++KIL+++P E++ ++L+ +Q+
Sbjct: 120 NEKVHPFVRRS-INIIKKYFEEYALVGQDILENKESWDKILALVP-EAIHADLQQGFQKC 177
Query: 282 RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE----EIVFAFTYPRLDMEVSKHR 337
S RWE LK T+ + + +C EI+ + +PRLD+ VSK
Sbjct: 178 HSS--------LQRWEHLKKTIAKHQNNTKN-DKCAPWLEWEIMLQYCFPRLDINVSKGI 228
Query: 338 NHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRM--------- 388
NHLLK+PF VHPKTGR+ +PI+ + ++FDP TVPT+S + REL+ +
Sbjct: 229 NHLLKSPFSVHPKTGRISVPINLQKVDQFDPFTVPTISSICRELDAISNNEEEKEENEAE 288
Query: 389 -DVD---NEWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
D+ +++KTSL ++ F FL+ L KS K E+
Sbjct: 289 SDIKRRTRDYKKTSLAPYVKVF-EQFLENLDKSRKGEL 325
>gi|156836890|ref|XP_001642485.1| hypothetical protein Kpol_322p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113020|gb|EDO14627.1| hypothetical protein Kpol_322p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 417
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 243/435 (55%), Gaps = 37/435 (8%)
Query: 2 LIDGPKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSF 61
+ + V G + ++ YY LFP IF W+ N P+ D REF+
Sbjct: 1 MTNSTTNNGVAGGGISSEDMRYYYQFLFPFKPIFNWL---NHSPKPSID---IINREFAM 54
Query: 62 TLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVER 121
+ Y R+ SF++ E + I+ P + +IG +Y+ P R + + P+E+
Sbjct: 55 AFRSGAYKRYNSFSNVQEFKAQIERANPDRFEIGAIYNKPPKDRDSILKTE---MKPLEK 111
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
EL+FDID+ DYD R CCSGA VC +CW +T+A+KV++ L++DFGF+ +WV+SGRRG
Sbjct: 112 ELVFDIDMDDYDTYRTCCSGAQVCNKCWKFITLAMKVMEVTLKEDFGFNDFIWVFSGRRG 171
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
HCW+ D +AR + + QR + DY V + + N++K++S P HP L RS ++L+ +F
Sbjct: 172 AHCWISDKRARIMNDLQRKNVLDYVNVVR-DRNADKRLSLKRPYHPHLSRSL-DILKPYF 229
Query: 242 EEKLLLSQNLFSTEER-YEKILSMIPDESVTSELRGKWQEN-RRSSNSK-EDINFFRWEQ 298
++ QN + ++ ++ +L+ + D+ + L+ W +N RSS K DI ++
Sbjct: 230 VSIIIEEQNPWENDKHAFDTLLTALHDKQLIDALKKYWTDNPNRSSRQKWSDI-----DE 284
Query: 299 LKNTLQSGKQK--VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCI 356
+ +TL+ +++ V L+ C E++V A YP+LD+EV+K HLLK+PFC+HP TG VC+
Sbjct: 285 IASTLKISRKQEFVNRLKECKEDLVLATLYPKLDVEVTKQTIHLLKSPFCIHPSTGNVCV 344
Query: 357 PIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK 416
PI + F P P L +L E+ + +N+ E+TSL I F+ F+ ++K
Sbjct: 345 PI----VDGFTPDAAPKLIKLQSEMESN------NNDVEQTSLQPFIEIFQ-KFVNQVIK 393
Query: 417 S-----CKEEMESGY 426
+ +E E GY
Sbjct: 394 NEIGSVKRERDEDGY 408
>gi|363748212|ref|XP_003644324.1| hypothetical protein Ecym_1265 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887956|gb|AET37507.1| hypothetical protein Ecym_1265 [Eremothecium cymbalariae
DBVPG#7215]
Length = 439
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 230/411 (55%), Gaps = 30/411 (7%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIY 68
GNV P + Y YY L+P IF+W+S+ + + REF+ + Y
Sbjct: 36 GNVGPSSSDMQY---YYQYLYPFKLIFQWLSHSPKPQRDIIN------REFAMAFRSGAY 86
Query: 69 LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDID 128
R+ SFN+ E + I+ P + +IG VY+ P R + + P+E+EL+FDID
Sbjct: 87 KRYNSFNTIQEFKQQIQRGNPDRFEIGAVYNKPPRDRDSVLKTE---MRPIEKELVFDID 143
Query: 129 ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
+ DYD R CCS A VC +CW +++A++V++T+LR+DFGF +WV+SGRRG HCW+ D
Sbjct: 144 MDDYDAFRTCCSRAQVCDKCWKFISLAMQVMNTSLREDFGFTEYIWVFSGRRGAHCWISD 203
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
+AR LT+ QR +I DY V + + N +K++F P HP L RS +L+ F +L
Sbjct: 204 KRARVLTDIQRRSIIDYMNVIR-DRNLERKLNFIRPYHPHLSRSLN-ILKPHFFSFILRE 261
Query: 249 QNLFSTEE-RYEKILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQS 305
Q+ + +E + +L + D + L+ W+EN R S +DI+ Q+K T +
Sbjct: 262 QDPWKDDELAIQSLLPALHDRQLADMLKQYWKENPGRCSEKKWKDIDVIASNQMKQTRK- 320
Query: 306 GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEE 365
+ LR C E+ + A YP+LD+EV+K HLLKAPFC+HP TG VC+PI +
Sbjct: 321 -QDYTTRLRECKEDFILAVLYPKLDVEVTKQTIHLLKAPFCIHPSTGNVCVPI----TDI 375
Query: 366 FDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK 416
F P+ PTL L +E+ + N+ E+TSL I F S+++ ++K
Sbjct: 376 FTPSNAPTLFTLQQEMESN------GNKIEETSLQPFIDIF-SNYVSDVIK 419
>gi|255717006|ref|XP_002554784.1| KLTH0F13728p [Lachancea thermotolerans]
gi|238936167|emb|CAR24347.1| KLTH0F13728p [Lachancea thermotolerans CBS 6340]
Length = 417
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 235/420 (55%), Gaps = 29/420 (6%)
Query: 14 DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQS 73
+G + + ++ YY L+P IF W+ N P D RE + + Y R+ S
Sbjct: 15 NGPSTSDMQYYYQYLYPFKPIFTWL---NHSPKPGRD---MINRELAMAFRSGAYKRYNS 68
Query: 74 FNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYD 133
F+S E +N I+ P + +IG +Y+ P + + P+E+E++FDID+ DYD
Sbjct: 69 FDSVQEFKNQIQRANPDRFEIGAIYNKPPRNMDSILKAE---MKPLEKEVVFDIDMDDYD 125
Query: 134 DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARR 193
R CCSGA VC +CW +++A+KVI+ AL +DFG++ +WV+SGRRG HCWV D ++R
Sbjct: 126 SYRTCCSGASVCSKCWKFISLAMKVINVALVEDFGYEDFIWVFSGRRGAHCWVSDKRSRL 185
Query: 194 LTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFS 253
L++ QR ++ DY V + N +K+++ P HP L RS ++L+ +F E +L Q+ +
Sbjct: 186 LSDIQRRSVLDYMNVVR-ERNLDKRLNLKRPYHPHLTRSL-DILKPYFVEIILREQDPWR 243
Query: 254 TEE-RYEKILSMIPDESVTSELRGKWQEN-RRSSNSK-EDINFFRWEQLKNTLQSGKQK- 309
++ + +L+ + D+++ L+ W+ N RRSS K DI+ QLK+ S K
Sbjct: 244 DDDMAFGSLLTGLHDKNLIEVLKRYWKSNPRRSSEQKWSDIDALAASQLKHPSSSKKTDF 303
Query: 310 VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPT 369
L C E++V A YP+LD+EV+K HLLKAPFC+HP TG VC+PI+ E F P+
Sbjct: 304 FNKLHECKEDLVLATLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPIN----ETFIPS 359
Query: 370 TVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAK 429
P L EL RE+ N+ E TSL F F Q + + ++E+ S + +
Sbjct: 360 NAPKLIELQREMEAN------GNKVENTSLQP----FLDQFQQFVNQVTRKELASAKRER 409
>gi|365760106|gb|EHN01849.1| Pri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 406
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 222/400 (55%), Gaps = 28/400 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY L+P +F W+ N P+ D REF+ + Y R+ SFNS E
Sbjct: 15 MEYYYKSLYPFKHVFNWL---NHSPKPSRD---MINREFAMAFRSGAYKRYNSFNSVQEF 68
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ I+ P + +IG +Y+ P +R + +E+EL+FDID+ DYD R CCS
Sbjct: 69 KAQIERSNPDRFEIGAIYNKPPRERDTLLKSE---LKALEKELVFDIDMDDYDSFRTCCS 125
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC +CW +++A+K+++TAL +DFG++ ++WV+SGRRG HCWV D +AR LT+ QR
Sbjct: 126 GAQVCFKCWKFISLAMKIMNTALTEDFGYNDLIWVFSGRRGAHCWVSDKRARALTDIQRR 185
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER-YE 259
+ DY V + + N++K+++ P HP L RS E L+ FF +L QN + ++ +
Sbjct: 186 NVLDYVNVVR-DRNTDKRLALKRPYHPHLARSL-EQLKPFFISIMLEEQNPWEDDQHAID 243
Query: 260 KILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
+L + D+ + LR W +N R S DI+ K Q + LR C
Sbjct: 244 TLLPALYDKQLIDSLRKHWLDNPGRSSKEKWNDIDRVATSLFKGPKQDS--HIGRLRECK 301
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
E++V YP+LD+EV+K HLLKAPFC+HP TG VC+PID E F P P L +L
Sbjct: 302 EDLVLMTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPID----ESFTPEKAPKLIDL 357
Query: 378 LRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKS 417
E M+ +N+ TSL I F+ +++ LLK+
Sbjct: 358 QTE-------MEKNNDVSLTSLQPFIDQFQ-AYVTSLLKN 389
>gi|363745046|ref|XP_424273.3| PREDICTED: uncharacterized protein LOC426646 [Gallus gallus]
Length = 966
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 193/309 (62%), Gaps = 17/309 (5%)
Query: 114 NVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHIL 173
F PVE+EL+FDID+TDYDDVR CCS AD+C +CW LMT+A++VID AL +D G H L
Sbjct: 49 GAFQPVEKELVFDIDMTDYDDVRTCCSSADICSKCWTLMTIAVRVIDRALVEDLGMKHRL 108
Query: 174 WVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSY 233
WVYSGRRGVHCWVCD R+ + R A +Y + KG + KKV+ P+HPF+ RS
Sbjct: 109 WVYSGRRGVHCWVCDDAVRKWSPALRAAAVEYLSLVKGGAETVKKVNLSEPVHPFIRRSV 168
Query: 234 TEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINF 293
+ V+ ++FE L Q++ + ER++K+L+++P+E +E +S K+ +
Sbjct: 169 S-VVEKYFEAYALQGQDILGSPERWDKVLALVPEEH---------RELLQSEFPKKRDSV 218
Query: 294 FRWEQLKNTLQSGKQKVQGLR--RCVE--EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHP 349
RWE LK ++ ++ + C E++ + +PRLD+ VSK HLLK+PF VHP
Sbjct: 219 QRWELLKGRMERTRRLASSGKGTACYADWEVMLQYCFPRLDINVSKGIGHLLKSPFSVHP 278
Query: 350 KTGRVCIPIDPKDCEEFDPTTVPTLSELLRELN-TGDSRMDVDNEWEKTSLGKSIRFFRS 408
KTGR+ +P+D + ++FDP VPT+S L +EL+ GD D E+T + +R +R
Sbjct: 279 KTGRISVPLDVQRLDDFDPFAVPTISSLCQELDAAGDDAEQEDG--EETEPKRRMRDYRR 336
Query: 409 SFLQPLLKS 417
+ L P +K+
Sbjct: 337 TQLAPYVKA 345
>gi|410084032|ref|XP_003959593.1| hypothetical protein KAFR_0K01020 [Kazachstania africana CBS 2517]
gi|372466185|emb|CCF60458.1| hypothetical protein KAFR_0K01020 [Kazachstania africana CBS 2517]
Length = 417
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 228/394 (57%), Gaps = 29/394 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY ++P +IF+W+ N P+ D + RE + + Y R+ SF+S +E
Sbjct: 26 MEYYYRSMYPFKEIFEWL---NHSEVPSKDMT---NRELAMAFRSGAYKRYNSFSSIAEF 79
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+++I++ P + +IG +Y+ P +R + + P+E+ELIFDID+ DYD R CCS
Sbjct: 80 KSTIEKSNPDRFEIGAIYNKPPKERDSILKSE---LKPLEKELIFDIDMDDYDLFRTCCS 136
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC +CW +++AI+VI+ L +DFGF +WV+SGRRG HCW+ D +AR L + QR
Sbjct: 137 GAMVCDKCWKFISLAIQVINICLEEDFGFKDYIWVFSGRRGAHCWISDKRARILNDLQRR 196
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER-YE 259
I DY V + + +K+++ P HP LVRS E+L+ F E +L Q+ + ++ +E
Sbjct: 197 NILDYVNVVR-DRKYDKRLALRRPYHPHLVRS-VELLKSHFVEIILEEQDPWQDDKNAFE 254
Query: 260 KILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQSGKQK---VQGLR 314
+L+ + D+ + LR W EN R S DI+ +K + + KQ+ + LR
Sbjct: 255 TLLTGLHDKVLIDALRKYWTENPGRSSKQKWNDIDAIATNDVK--INNNKQRNDFMTRLR 312
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
C E++V A YP+LD+EV+K HLLKAPFC+HP TG VC+PI ++F P P L
Sbjct: 313 ECKEDVVLATLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPI----FKDFTPMAAPKL 368
Query: 375 SELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRS 408
+L E+ S++ E TSL I++F +
Sbjct: 369 IDLQNEMEKNLSKV------ESTSLQPYIQYFHA 396
>gi|365989488|ref|XP_003671574.1| hypothetical protein NDAI_0H01570 [Naumovozyma dairenensis CBS 421]
gi|343770347|emb|CCD26331.1| hypothetical protein NDAI_0H01570 [Naumovozyma dairenensis CBS 421]
Length = 414
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 236/420 (56%), Gaps = 30/420 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY L+P IF W++ H REF+ + Y R+ SF++ E
Sbjct: 21 MEYYYTHLYPFKLIFNWLN------HSLTPNRDIVNREFAMAFRSGAYKRYNSFSTIQEF 74
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+N I++ P + +IG +Y+ P +R + + P+E+ELIFDID+ DYD R CCS
Sbjct: 75 KNQIEKGNPDRFEIGAIYNRPPKERDSLLKSE---MQPLEKELIFDIDMDDYDTFRTCCS 131
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC +CW +++A+ VI+T+L +DFG++ +WV+SGRRG HCWV D +AR L + QR
Sbjct: 132 GAQVCEKCWKFISLAMSVINTSLMEDFGYEDFIWVFSGRRGAHCWVSDKRARILNDLQRR 191
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER-YE 259
+ +Y V + + ++K+++ P HP L RS + L+ +F + +L QN + +E +
Sbjct: 192 NVLEYLNVVR-DRTASKRLALKRPYHPHLSRSLDQ-LKPYFVDIILKEQNPWQNDEHALD 249
Query: 260 KILSMIPDESVTSELRGKWQEN-RRSSNSK-EDINFFRWEQLKNTLQSGKQKV-QGLRRC 316
+L + D+ + L+ W+EN RSS K DI+ + LK S KQ V LR C
Sbjct: 250 TLLPGLYDKQLIENLKRYWKENPNRSSTEKWNDIDIIASKDLK---ASKKQDVINRLREC 306
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
E++V A YP+LD+EV+K HLLKAPFC+HP TG VC+PID + F P P L +
Sbjct: 307 KEDLVIAALYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPID----DTFTPECAPKLID 362
Query: 377 LLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKAKIQQTKNS 436
L E+ + D+ EKT+L I F+ F+ ++ E ++ G+ + + + S
Sbjct: 363 LQNEI-------EKDHNSEKTTLQPFIEKFQ-IFVNSVINHEVENVKRGHDSLENENRES 414
>gi|367000025|ref|XP_003684748.1| hypothetical protein TPHA_0C01580 [Tetrapisispora phaffii CBS 4417]
gi|357523045|emb|CCE62314.1| hypothetical protein TPHA_0C01580 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 230/409 (56%), Gaps = 28/409 (6%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY +LFP IF W+++ N P D REF+ + Y R+ SF++ E
Sbjct: 17 MQYYYQQLFPFKTIFNWLNHSN---KPTND---IVNREFAMAFRSGAYKRYNSFSTAQEF 70
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ +I++ P + ++G VY+ P +R + + P+E+EL+FDID+ DYD R CCS
Sbjct: 71 KATIEKSNPDRFEVGAVYNKPPKERDSILKSE---MKPLEKELVFDIDMDDYDAFRTCCS 127
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC +CW +++AIKV++ L +DFGF +WV+SGRRG HCWV D +AR + + QR
Sbjct: 128 GAQVCQKCWKFISIAIKVMELTLIEDFGFKDFIWVFSGRRGAHCWVSDKRARLMNDNQRR 187
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER-YE 259
+ DY V + + + NK+ + P HP L RS EVL+ +F E +L QN + ++ E
Sbjct: 188 NVLDYVNVVR-DRSYNKRQALRRPYHPHLARS-LEVLKPYFVEVILEEQNPWQDDKNALE 245
Query: 260 KILSMIPDESVTSELRGKWQEN-RRSSNSK-EDINFFRWEQLKNTLQSGKQK---VQGLR 314
+L + D+ + L W N RSS K DI+ + +S ++ + LR
Sbjct: 246 TLLQGLHDKQLIEALDSYWASNPNRSSKEKWADIDQIATNNIIRNFKSNARRQEYLARLR 305
Query: 315 RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
E++V A YP+LD+EV+K HLLK+PFC+HP TG VC+PI E F P P L
Sbjct: 306 EGKEDLVIATLYPKLDIEVTKQTIHLLKSPFCIHPATGNVCVPIH----ENFTPDDAPKL 361
Query: 375 SELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEME 423
+L E+ ++++ E+TSL + F+ F+Q ++K+ E ++
Sbjct: 362 IKLQSEMEQHNNKV------EETSLQPFLNIFQ-EFVQRVIKNEHEALK 403
>gi|401406864|ref|XP_003882881.1| putative DNA primase small subunit [Neospora caninum Liverpool]
gi|325117297|emb|CBZ52849.1| putative DNA primase small subunit [Neospora caninum Liverpool]
Length = 516
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 164/486 (33%), Positives = 252/486 (51%), Gaps = 91/486 (18%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHP---ACDKSYFGRREFSFT------LDN--DIYL 69
L YY +LFP ++ KW++Y N P A D +F +RE FT +DN + +L
Sbjct: 20 LLFYYDKLFPFGELSKWLTYKNSPHLPESEANDPLFFAKREVCFTCRKPGGVDNADEFFL 79
Query: 70 RFQSFNSESELENSIKEKCPS---KIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFD 126
R+QSF + E++ +K+ K D G VYS+ +++ ++ F P ++EL+FD
Sbjct: 80 RWQSFRTVEEMKERLKDMSSLVCFKFDFGAVYSLPVSEKDSF----HTAFKPEQKELVFD 135
Query: 127 IDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
ID+ DYDD+R CC+ VC +CW + VA+ ++D+ALR+DFGF++ILWVYSGRRGVHCWV
Sbjct: 136 IDMNDYDDIRTCCTDKRVCQKCWAFLEVAMSLLDSALREDFGFENILWVYSGRRGVHCWV 195
Query: 187 CDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSF-PGPLHPFLV-RSYTEVLREFFEEK 244
CD AR L ++ R + +Y + G++ KKV G + P+ V R++ R F ++
Sbjct: 196 CDSSARLLPSDGRAQLCEYLNLCTGSDQQMKKVMLRGGRVQPYFVDRAFCLAYRRF--QR 253
Query: 245 LLLSQNLFSTEE-----------------RYEKILSMIPDESV-TSELRGKWQENRRSSN 286
LL Q+ F+++ Y+K+L+ +PD + TS W+ +S
Sbjct: 254 LLEEQDFFASDSPHLPASGEFQDSTAPQFHYQKLLNYLPDFAAETSGSSRSWKGTAKSER 313
Query: 287 SK-----------------------------EDINFFRWEQLKNTL------------QS 305
+ + F E+L N L
Sbjct: 314 REGARGAPAGASSGAFAVAKPHMSAWVKKRVSERRRFSSEELFNELCAVAGCPRPRDFSG 373
Query: 306 GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKD--- 362
+ V+ + ++EIV A++YPRLD+ VSK HLLK+PFC+H TGRVC+P+D +
Sbjct: 374 DVEDVKQIPSFIKEIVLAYSYPRLDINVSKDIGHLLKSPFCIHHSTGRVCVPLDVESDAG 433
Query: 363 -----CEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKS 417
+ FDP VPTL+ L R+ + +R + ++TSL + FFR FL LLK+
Sbjct: 434 RGSGTRQRFDPARVPTLTLLRRQFDD-PARAHLPPH-QRTSLAPYLDFFRDQFLHSLLKN 491
Query: 418 CKEEME 423
EEM+
Sbjct: 492 VTEEMK 497
>gi|452822577|gb|EME29595.1| DNA primase small subunit [Galdieria sulphuraria]
Length = 403
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 212/382 (55%), Gaps = 43/382 (11%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY FP I +W+SY +K F RRE SFTLDN+IY+R+QSF S +L
Sbjct: 6 YYQEFFPVDLIVRWLSYSFQR-----NKQLFERRELSFTLDNEIYVRYQSFESAEDLRKV 60
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSG-- 141
+ +K P KIDIG VY+ P Q +FAP+ERELIFDID+TDY+DV S
Sbjct: 61 LVQKLPVKIDIGAVYNYPPCN-----QSLVTLFAPLERELIFDIDLTDYEDVAIMKSEDE 115
Query: 142 ADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGA 201
D+C W L+ A++++D ALRDDFGF HILWVYSGRRGVH W+CD +AR+L++E R +
Sbjct: 116 VDLCDNNWYLIAAAVELLDKALRDDFGFQHILWVYSGRRGVHGWICDERARKLSDECRDS 175
Query: 202 IADYFRVYKGN---------ENSNKKVSFPGPLH-------PFLVRSYTEVLREFFEEKL 245
I +Y V + E SN V L PFL RS+ + L F + +
Sbjct: 176 ILEYLTVRLPSALREISVKREKSNVSVCSDDSLRQWNTLSDPFLKRSF-DYLYPLFLKYV 234
Query: 246 LLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQS 305
+ S FS E ++K LS+IP E SN+ + WE+++ L+
Sbjct: 235 VQSPQFFSDENHFKKYLSLIPSHYALQ------IERLIESNT---VGMDLWERVEEMLKE 285
Query: 306 GKQK-VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
K+ GL C +VF + YPRLD VS+H NHLLK+PFC+HPKT RVC+P +
Sbjct: 286 PKKSCFYGLVVC---LVFHYLYPRLDANVSRHMNHLLKSPFCLHPKTQRVCVPFSANEVW 342
Query: 365 EFDPT-TVPTLSELLRELNTGD 385
F P+ P +S+ L++ D
Sbjct: 343 TFQPSRDAPQISDENLGLDSND 364
>gi|401837851|gb|EJT41709.1| PRI1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 405
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 225/405 (55%), Gaps = 30/405 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY L+P +F W+ N P+ D REF+ + Y R+ SFNS E
Sbjct: 15 MEYYYKSLYPFKHVFNWL---NHSPKPSRD---MINREFAMAFRSGAYKRYNSFNSVQEF 68
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ I+ P + +IG +Y+ P +R + +E+EL+FDID+ DYD R CCS
Sbjct: 69 KAQIERSNPDRFEIGAIYNKPPRERDTLLKSE---LKALEKELVFDIDMDDYDSFRTCCS 125
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC +CW +++A+K+++TAL +D G+ ++WV+SGRRG HCWV D +AR LT+ QR
Sbjct: 126 GAQVCFKCWKFISLAMKIMNTALTEDLGYKDLIWVFSGRRGAHCWVSDKRARALTDIQRR 185
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER-YE 259
+ DY V + + N++K+++ P HP L RS E L+ FF +L QN + ++ +
Sbjct: 186 NVLDYVNVVR-DRNTDKRLALKRPYHPHLARSL-EQLKPFFISIMLEEQNPWEDDQHAID 243
Query: 260 KILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEE 319
+L + D+ + LR W +N S SKE N +++ +L G + LR C E+
Sbjct: 244 TLLPALYDKQLIDSLRKHWLDNPGRS-SKEKWNDI--DRVATSLFKGPH-IGRLRECKED 299
Query: 320 IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLR 379
+V YP+LD+EV+K HLLKAPFC+HP TG VC+PID E F P P L +L
Sbjct: 300 LVLMTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPID----ESFTPEKAPKLIDLQT 355
Query: 380 ELNTGDSRMDVDNEWEKTSLGKSIRFFR---SSFLQPLLKSCKEE 421
E M+ +N+ TSL I F+ +S L+ L S K E
Sbjct: 356 E-------MEKNNDVSLTSLQPFIDQFQAYVTSLLKNELGSIKRE 393
>gi|167537141|ref|XP_001750240.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771230|gb|EDQ84899.1| predicted protein [Monosiga brevicollis MX1]
Length = 1322
Score = 256 bits (655), Expect = 1e-65, Method: Composition-based stats.
Identities = 162/471 (34%), Positives = 236/471 (50%), Gaps = 103/471 (21%)
Query: 29 FPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKC 88
FP+ FKW+SYG DK F REFSFTL +D+Y+R+QSF SEL+
Sbjct: 887 FPYGKYFKWLSYG------GVDKKEFENREFSFTLKDDVYVRYQSFADMSELKEGRVVLI 940
Query: 89 PSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLEC 148
+ I P + K H + + F PV +EL+FDID+TDYD++R CCSGA +C +C
Sbjct: 941 STLAGIVP--EQEKPKDHKKIKSSE--FYPVAKELVFDIDMTDYDEIRTCCSGAAICHKC 996
Query: 149 WPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRV 208
W MT A+KV+D ALR+DFGF H+LWVYSGRRG+HCWVCD +AR L+ E RGA+A+Y ++
Sbjct: 997 WGFMTAAVKVLDAALREDFGFQHLLWVYSGRRGIHCWVCDKRARLLSQEARGAVAEYLQL 1056
Query: 209 YKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS-------------------- 248
+G + + KKVS PLHP R+ +L +F E +L S
Sbjct: 1057 VRGGDQTAKKVSLTSPLHPCAERA-CRILEPYFREVVLSSDSQVRQAVSLHPIPRQLHLF 1115
Query: 249 ------------------QNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKED 290
Q L + E +LS++ +++ ++++ NR + S E
Sbjct: 1116 VDARMSVKLTCLGSASSAQALLAHSEHCNTMLSILGMDAIEADIK----VNRSVTMSFEP 1171
Query: 291 INF--------------FRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKH 336
+ W Q + QK + + R +E++ + YPRLD+ VSK
Sbjct: 1172 SSLQLIVRCRCTTGCLGSEWAQRRQ-----GQKSKKVSR-TQELMLQYIYPRLDINVSK- 1224
Query: 337 RNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVD----- 391
TGRVC+PIDP +EFDP VPT+ L REL+ + ++
Sbjct: 1225 -------------GTGRVCVPIDPSKADEFDPFAVPTIDRLCRELDEFEEEQQLNAYTEA 1271
Query: 392 ---------NEWEKTSLGKSIRFFRSSFLQPLLKSCKEEME-SGYKAKIQQ 432
+ KTSL +++ F + FLQ L + E E +G K++ +
Sbjct: 1272 GEPSPKRKIQNFNKTSLSGAMKIF-TDFLQGLDEENAELAEDAGVKSEAME 1321
>gi|221486907|gb|EEE25153.1| DNA primase small subunit, putative [Toxoplasma gondii GT1]
Length = 509
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 250/479 (52%), Gaps = 84/479 (17%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHP---ACDKSYFGRREFSFT------LDN--DIYL 69
L YY +LFP ++ KW++Y N P A D +F +RE FT LDN + +L
Sbjct: 20 LLFYYDKLFPFGELSKWLTYKNSPHLPESEANDPLFFAKREVCFTCRKPGGLDNADEFFL 79
Query: 70 RFQSFNSESELENSIKEKCPS---KIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFD 126
R+QSF + E++ +K+ K D G VYSV +++ + + F P ++EL+FD
Sbjct: 80 RWQSFRTVEEMKEKLKDMSSLVCFKFDFGAVYSVPVSEKDS----SHSAFRPEQKELVFD 135
Query: 127 IDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
ID+ DYDD+R CC+ VC +CW + VA+ ++D ALR+DFGF++ILWV+SGRRGVHCWV
Sbjct: 136 IDMNDYDDIRTCCTDKRVCQKCWTFLEVAMSLLDAALREDFGFENILWVFSGRRGVHCWV 195
Query: 187 CDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP--LHPFLVRSYTEVLREFFEEK 244
CD AR L ++ R + +Y + G + KKV+ G P + R++ R+F ++
Sbjct: 196 CDSSARLLPSDGRAQLCEYLNICTGTDQQVKKVTLRGGRVQPPSVDRAFCLAYRQF--QR 253
Query: 245 LLLSQNLFSTEER-----------------YEKILSMIPD-----ESVTSELRGKWQENR 282
LL Q+ F++ R Y+K+L+ +PD S + +G + R
Sbjct: 254 LLEEQDFFASNARALPASGDFPDSAAPQFHYQKLLNYLPDLSDSSSSHSRPWKGNAKNER 313
Query: 283 RSSNSK------------------EDINFFRWEQLKNTLQ-----------SGK-QKVQG 312
R + + F E+L N L SG+ + V+
Sbjct: 314 RDGRGGGVFAAAKPHMSAWVEKRLREKSGFSSEELFNELCAVSGCPRPRDFSGRVEDVKQ 373
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID--------PKDCE 364
+ V+EIV A++YPRLD+ VSK HLLK+PFC+H TGRVC+P++
Sbjct: 374 IPSFVKEIVLAYSYPRLDINVSKDIGHLLKSPFCIHHGTGRVCVPLEVAPERTRGASASS 433
Query: 365 EFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEME 423
FDP VPTL+ L R+ + SR + ++TSL + FFR FL LLK+ EE +
Sbjct: 434 RFDPARVPTLTLLRRQFDD-PSRAHLPPH-QRTSLAPYLDFFRDKFLYTLLKNVAEETK 490
>gi|221506598|gb|EEE32215.1| DNA primase small subunit, putative [Toxoplasma gondii VEG]
Length = 509
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 250/479 (52%), Gaps = 84/479 (17%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHP---ACDKSYFGRREFSFT------LDN--DIYL 69
L YY +LFP ++ KW++Y N P A D +F +RE FT LDN + +L
Sbjct: 20 LLFYYDKLFPFGELSKWLTYKNSPHLPESEANDPLFFAKREVCFTCRKPGGLDNADEFFL 79
Query: 70 RFQSFNSESELENSIKEKCPS---KIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFD 126
R+QSF + E++ +K+ K D G VYSV +++ + + F P ++EL+FD
Sbjct: 80 RWQSFRTVEEMKEKLKDMSSLVCFKFDFGAVYSVPVSEKDS----SHSAFRPEQKELVFD 135
Query: 127 IDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
ID+ DYDD+R CC+ VC +CW + VA+ ++D ALR+DFGF++ILWV+SGRRGVHCWV
Sbjct: 136 IDMNDYDDIRTCCTDKRVCQKCWTFLEVAMSLLDAALREDFGFENILWVFSGRRGVHCWV 195
Query: 187 CDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP--LHPFLVRSYTEVLREFFEEK 244
CD AR L ++ R + +Y + G + KKV+ G P + R++ R+F ++
Sbjct: 196 CDSSARLLPSDGRAQLCEYLNICTGTDQQVKKVTLRGGRVQPPSVDRAFCLAYRQF--QR 253
Query: 245 LLLSQNLFSTEER-----------------YEKILSMIPD-----ESVTSELRGKWQENR 282
LL Q+ F++ R Y+K+L+ +PD S + +G + R
Sbjct: 254 LLEEQDFFASNARALPASGDFPDSAAPQFHYQKLLNYLPDLSDSSSSHSRPWKGNAKNER 313
Query: 283 RSSNSK------------------EDINFFRWEQLKNTLQ-----------SGK-QKVQG 312
R + + F E+L N L SG+ + V+
Sbjct: 314 RDGRGGGVFAAAKPHMSAWVEKRLREKSGFSSEELFNELCAVSGCPRPRDFSGRVEDVKQ 373
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID--------PKDCE 364
+ V+EIV A++YPRLD+ VSK HLLK+PFC+H TGRVC+P++
Sbjct: 374 IPSFVKEIVLAYSYPRLDINVSKDIGHLLKSPFCIHHGTGRVCVPLEVAPERTRGASASS 433
Query: 365 EFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEME 423
FDP VPTL+ L R+ + SR + ++TSL + FFR FL LLK+ EE +
Sbjct: 434 RFDPARVPTLTLLRRQFDD-PSRAHLPPH-QRTSLAPYLDFFRDKFLYTLLKNVAEETK 490
>gi|237831887|ref|XP_002365241.1| DNA primase small subunit, putative [Toxoplasma gondii ME49]
gi|211962905|gb|EEA98100.1| DNA primase small subunit, putative [Toxoplasma gondii ME49]
Length = 509
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 250/479 (52%), Gaps = 84/479 (17%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHP---ACDKSYFGRREFSFT------LDN--DIYL 69
L YY +LFP ++ KW++Y N P A D +F +RE FT LDN + +L
Sbjct: 20 LLFYYDKLFPFGELSKWLTYKNSPHLPESEANDPLFFAKREVCFTCRKPGGLDNADEFFL 79
Query: 70 RFQSFNSESELENSIKEKCPS---KIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFD 126
R+QSF + E++ +K+ K D G VYSV +++ + + F P ++EL+FD
Sbjct: 80 RWQSFRTVEEMKEKLKDMSSLVCFKFDFGAVYSVPVSEKDS----SHSAFRPEQKELVFD 135
Query: 127 IDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
ID+ DYDD+R CC+ VC +CW + VA+ ++D ALR+DFGF++ILWV+SGRRGVHCWV
Sbjct: 136 IDMNDYDDIRTCCTDKRVCQKCWTFLEVAMSLLDAALREDFGFENILWVFSGRRGVHCWV 195
Query: 187 CDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP--LHPFLVRSYTEVLREFFEEK 244
CD AR L ++ R + +Y + G + KKV+ G P + R++ R+F ++
Sbjct: 196 CDSSARLLPSDGRAQLCEYLNICTGTDQQVKKVTLRGGRVQPPSVDRAFCLAYRQF--QR 253
Query: 245 LLLSQNLFSTEER-----------------YEKILSMIPD-----ESVTSELRGKWQENR 282
LL Q+ F++ R Y+K+L+ +PD S + +G + R
Sbjct: 254 LLEEQDFFASNARALPVSGDFPDSAAPQFHYQKLLNYLPDLSDSSSSHSRPWKGNAKNER 313
Query: 283 RSSNSK------------------EDINFFRWEQLKNTLQ-----------SGK-QKVQG 312
R + + F E+L N L SG+ + V+
Sbjct: 314 RDGRGGGVFAAAKPHMSAWVEKRLREKSGFSSEELFNELCAVSGCPRPRDFSGRVEDVKQ 373
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID--------PKDCE 364
+ V+EIV A++YPRLD+ VSK HLLK+PFC+H TGRVC+P++
Sbjct: 374 IPSFVKEIVLAYSYPRLDINVSKDIGHLLKSPFCIHHGTGRVCVPLEVAPERTRGASASS 433
Query: 365 EFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEME 423
FDP VPTL+ L R+ + SR + ++TSL + FFR FL LLK+ EE +
Sbjct: 434 RFDPARVPTLTLLRRQFDD-PSRAHLPPH-QRTSLAPYLDFFRDKFLYTLLKNVAEETK 490
>gi|444313503|ref|XP_004177409.1| hypothetical protein TBLA_0A00900 [Tetrapisispora blattae CBS 6284]
gi|387510448|emb|CCH57890.1| hypothetical protein TBLA_0A00900 [Tetrapisispora blattae CBS 6284]
Length = 424
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 222/402 (55%), Gaps = 28/402 (6%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY LFP IF W+++G+ P D REF+ + Y R+ SF+S E
Sbjct: 33 MQYYYQFLFPFNTIFSWLNHGD---KPGRD---IENREFAMAFRSGAYKRYNSFSSVQEF 86
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ I+ P + +IG +Y+ P R P+E+EL+FDID+ DYD R CC+
Sbjct: 87 KTQIERANPDRFEIGAIYNKPPKNRDTILNSD---MKPLEKELVFDIDMDDYDTYRTCCN 143
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC CW + +A+ V++ L++DFGF+ +WV+SGRRG HCWV D +AR L ++QR
Sbjct: 144 GAQVCDRCWRFIKLAMIVMEVTLKEDFGFNSFIWVFSGRRGAHCWVSDKRARLLNDQQRR 203
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER-YE 259
+I DY V K + ++ K++ P HP L+RS +L+ +F E +L QN + + +E
Sbjct: 204 SILDYVNVVK-DRSAEKRLLLRRPYHPHLLRSLN-LLKPYFVEIILEEQNCWEDDTHAFE 261
Query: 260 KILSMIPDESVTSELRGKWQEN-RRSSNSK-EDINFFRWEQLKNTLQSGKQK--VQGLRR 315
+L + D+ + L W+EN RSS K DI+ +L + +S +++ + +R
Sbjct: 262 TLLPCLHDKQLIESLTKYWKENPNRSSKDKWSDIDSIT-RKLTTSFKSARKQDFINRVRD 320
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
E+I+ YP+LD+EV+K HLLK+PFC+HP TG VC+PI + F P P L
Sbjct: 321 SKEDIILQTLYPKLDIEVTKQTIHLLKSPFCIHPATGNVCVPI----TDSFTPELAPKLI 376
Query: 376 ELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKS 417
+ E+ D N +KTSL I F S ++ L+ S
Sbjct: 377 NIQHEME------DNGNNIDKTSLKPYIDIF-SEYVNELMAS 411
>gi|47777403|gb|AAT38037.1| unknown protein [Oryza sativa Japonica Group]
gi|55167985|gb|AAV43853.1| unknown protein [Oryza sativa Japonica Group]
gi|215707277|dbj|BAG93737.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 166
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/161 (76%), Positives = 138/161 (85%), Gaps = 3/161 (1%)
Query: 193 RLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQNL 251
RL NEQR AIADYFRVYKG EN+ KKVS G LHPFL RSYT+VL+ FFE+KLLLSQ L
Sbjct: 8 RLNNEQRAAIADYFRVYKGGENTMKKVSLTGAVLHPFLARSYTDVLKGFFEDKLLLSQQL 67
Query: 252 FSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQ 311
F++EERY+KIL +IPDE+V SEL KWQ NRRSS SKED+N RWEQLK+TLQSGK K
Sbjct: 68 FASEERYQKILDLIPDENVASELHDKWQGNRRSSISKEDVNATRWEQLKSTLQSGKHK-- 125
Query: 312 GLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
GLRRC+EEIVF++TYPRLDMEVSKH NHLLKAPFC+HPKTG
Sbjct: 126 GLRRCIEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTG 166
>gi|313228730|emb|CBY17881.1| unnamed protein product [Oikopleura dioica]
Length = 391
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/358 (38%), Positives = 202/358 (56%), Gaps = 31/358 (8%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L YY FP +W+ Y ND RREFSFTL +D+Y RF+SF S+ EL
Sbjct: 20 LSSYYKEYFPLDPFIEWLGYRND--------ETLSRREFSFTLKDDVYTRFRSFTSKEEL 71
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + P KIDIG +Y+ R + F +REL+FDIDI+DYDDVR CC
Sbjct: 72 HQAFIKTKPEKIDIGAIYNYSCKHRLSPD------FKEEQRELVFDIDISDYDDVRTCCQ 125
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A +C +CWPLM++ +KV++ L+ FGF+ IL+V+SGRRG+HCWV D +AR+L +R
Sbjct: 126 EARICQKCWPLMSICVKVLEETLKTAFGFEQILFVFSGRRGIHCWVFDEEARKLNGAERF 185
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
A+A Y +V + +++ LH + + + + + ++ L +Q+L TEE +
Sbjct: 186 ALAHYCQV------TAQQIGTSHRLHTHIQNALK--ITDLYWDEYLETQDLLGTEEGIDS 237
Query: 261 ILSMIP-DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEE 319
L + D+S+ +E W+E K D RW + + + K R +E
Sbjct: 238 FLKYVKLDDSIKNE----WKEQML----KYDTTMERWSIFQQKRKEAQSKKYRDRLFIER 289
Query: 320 IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
I A TYPR+D++V++ NHLLKAPF VHPKTG+VC+P + D + FD VPT+ L
Sbjct: 290 IKIAVTYPRIDIKVTEGFNHLLKAPFSVHPKTGKVCVPFNADDVDSFDCDNVPTVFSL 347
>gi|172087532|ref|XP_001913308.1| DNA primase small subunit [Oikopleura dioica]
gi|42601437|gb|AAS21460.1| DNA primase small subunit [Oikopleura dioica]
Length = 391
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/358 (38%), Positives = 202/358 (56%), Gaps = 31/358 (8%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L YY FP +W+ Y ND RREFSFTL +D+Y RF+SF S+ EL
Sbjct: 20 LSSYYKEYFPLDPFIEWLGYRND--------ETLSRREFSFTLKDDVYTRFRSFTSKEEL 71
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ + P KIDIG +Y+ R + F +REL+FDIDI+DYDDVR CC
Sbjct: 72 HQAFIKTKPEKIDIGAIYNYSCKHRLSPD------FKEEQRELVFDIDISDYDDVRTCCQ 125
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A +C +CWPLM++ +KV++ L+ FGF+ IL+V+SGRRG+HCWV D +AR+L +R
Sbjct: 126 EARICQKCWPLMSICVKVLEETLKTAFGFEQILFVFSGRRGIHCWVFDEEARKLNGAERF 185
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
A+A Y +V + +++ LH + + + + + ++ L +Q+L TEE +
Sbjct: 186 ALAHYCQV------TAQQIGTSHRLHTHIQSALK--ITDLYWDEYLETQDLLGTEEGIDS 237
Query: 261 ILSMIP-DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEE 319
L + D+S+ +E W+E K D RW + + + K R +E
Sbjct: 238 FLKYVKLDDSIKNE----WKEQML----KYDTTMERWSIFQQKRKEAQSKKYRDRLFIER 289
Query: 320 IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
I A TYPR+D++V++ NHLLKAPF VHPKTG+VC+P + D + FD VPT+ L
Sbjct: 290 IKIAVTYPRIDIKVTEGFNHLLKAPFSVHPKTGKVCVPFNADDVDSFDCDNVPTVFSL 347
>gi|50293547|ref|XP_449185.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528498|emb|CAG62155.1| unnamed protein product [Candida glabrata]
Length = 410
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 233/425 (54%), Gaps = 29/425 (6%)
Query: 11 VIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLR 70
+ P+G + ++ YY L+P IF+W+ N + P+ D REF+ + Y R
Sbjct: 5 IKPNGPSSMDMQYYYQYLYPFKQIFQWV---NHSQKPSRD---IINREFAMAFRSGAYKR 58
Query: 71 FQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDIT 130
+ S+ E + +I++ P + +IG +Y+ P +R + + P+E+EL+FDID+
Sbjct: 59 YNSYGDVQEFKEAIEKSNPDRFEIGAIYNKPPKERDSLLKSE---MVPLEKELVFDIDMD 115
Query: 131 DYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGK 190
DYD R CCSGA VC +CW +++A+++I+ AL++DFG++ +WV+SGRRG HCWV D +
Sbjct: 116 DYDTFRTCCSGAQVCYKCWRFISLAMEIINVALKEDFGYNDFVWVFSGRRGAHCWVSDKR 175
Query: 191 ARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQN 250
AR L + QR + DY V + + N +K +S P HP L RS ++L+ F + +L Q+
Sbjct: 176 ARALNDIQRRNVLDYLNVVR-DRNYDKPLSLKRPYHPHLSRS-LQILKGHFVDIILEEQD 233
Query: 251 LFSTEERYEK-ILSMIPDESVTSELRGKWQEN-RRSSNSK-EDINFFRWEQLKNTLQSGK 307
+ ++ K +L ++ V LR W EN RSS +K DI+ L T + K
Sbjct: 234 PWRDDQHAIKTLLPAFTEKPVIEALRKYWTENPNRSSKAKWGDIDTIA-SNLNITNKRQK 292
Query: 308 QKVQG-LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEF 366
+ + LR E++V YP+LD+EV+K HLLKAPFC+HP TG VC+PI + F
Sbjct: 293 EIMNNRLREAKEDLVLTTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPI----VDNF 348
Query: 367 DPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPL---LKSCKEEME 423
P P L L E+ +N +TSL + +F+S Q L L S K E E
Sbjct: 349 TPEKAPKLIVLQNEMEKS------NNNVSETSLQPFLDYFQSYVSQLLKHELGSVKRERE 402
Query: 424 SGYKA 428
K+
Sbjct: 403 EDVKS 407
>gi|254582202|ref|XP_002497086.1| ZYRO0D15114p [Zygosaccharomyces rouxii]
gi|238939978|emb|CAR28153.1| ZYRO0D15114p [Zygosaccharomyces rouxii]
Length = 417
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 228/407 (56%), Gaps = 30/407 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
++ YY ++P IF W+++ P K R E + + Y R+ S+ S E
Sbjct: 23 MQYYYQFIYPFKQIFNWLNHS-----PKPGKDMINR-ELAMAFRSGAYKRYNSYRSVQEF 76
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
++ + + P + +IG +Y+ P +R + + P+E+EL+FDID+ DYD R CCS
Sbjct: 77 KSQVVKANPDRFEIGAIYNKPPQERDSLLKSE---MIPLEKELVFDIDMDDYDTFRTCCS 133
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC +CW +++A+ +++TAL +DFGF++ LWV+SGRRG HCWV D +AR L N QR
Sbjct: 134 GAQVCGKCWKFISLAMTIMNTALIEDFGFENFLWVFSGRRGAHCWVSDKRARALNNLQRS 193
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER-YE 259
I DY V K + +NK+++ P HP + RS E L+ F +L Q+ + + +
Sbjct: 194 NIIDYMNVVK-DRTANKRLALLRPYHPHIARSL-EQLKPHFTAIILEEQDPWRDDAHAMQ 251
Query: 260 KILSMIPDESVTSELRGKWQENR-RSSNSK-EDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
+L + D ++ L W+ + RSS K DI+ ++LK + ++ + LR C
Sbjct: 252 TLLPGLHDRNLIEALSRYWKAHPGRSSKEKWSDIDAIAAKELK--ISRKQEFINRLRECK 309
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
E++V + YP+LD+EV+K +HLLKAPFC+HP TG VC+PID E F P+ P L +L
Sbjct: 310 EDLVISTLYPKLDVEVTKQTHHLLKAPFCIHPGTGNVCVPID----ENFVPSKAPRLIDL 365
Query: 378 LRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMES 424
E+ +++ KTSL F +F + + K KEE+ +
Sbjct: 366 QSEMELR------NHDISKTSLQP----FLDAFQRQINKLVKEELSN 402
>gi|328782870|ref|XP_001121983.2| PREDICTED: DNA primase small subunit [Apis mellifera]
Length = 364
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/258 (46%), Positives = 161/258 (62%), Gaps = 12/258 (4%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
+ L YY RLFP D ++W+SYGN + F REFSFTL D+Y+RFQSF +
Sbjct: 9 DLLPTYYARLFPFHDYYRWLSYGN--------VNTFNNREFSFTLQGDVYIRFQSFKNVK 60
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
ELE I+ P KID+G VY+ P ++ G N F PVE+EL+FDID+TDYD++R C
Sbjct: 61 ELELQIRRLLPVKIDVGAVYNYSPKEQ---KMRGTN-FHPVEKELVFDIDMTDYDEIRTC 116
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
CSGAD+C CW M +A K++DTALR DFG+ HILWV+SGRRG+HCWVCD AR LT +
Sbjct: 117 CSGADICASCWKFMALACKILDTALRSDFGYKHILWVFSGRRGIHCWVCDPCARTLTARE 176
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
RGA+A+Y ++ G E KKV+ PG ++ E + F + QN+ T++
Sbjct: 177 RGAVAEYLQIIDGGEYMKKKVNLPGDKIHHSIKRALETIEAVFVPFCIEEQNILGTDDGV 236
Query: 259 EKILSMIPDESVTSELRG 276
EK L + D+ + EL
Sbjct: 237 EKFLQIFNDDEIKQELXA 254
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 15/129 (11%)
Query: 307 KQKVQGLRRCVEEIVFAFTYPRLDME---VSKHRNHLLKAPFCVHPKTGRVCIPIDPKDC 363
+Q + G VE+ + F + E VSK NHLLK+PFC+HPKTG+VCIP
Sbjct: 226 EQNILGTDDGVEKFLQIFNDDEIKQELXAVSKGMNHLLKSPFCIHPKTGKVCIPFTANTV 285
Query: 364 EEFDPTTVPTLSELLRELNTGDSRMDVDNE-----------WEKTSLGKSIRFFRSSFLQ 412
++F P VPT+ L+ E+N D + + E ++KTSL KS+ F+ FL+
Sbjct: 286 DKFHPDKVPTIKTLIEEINEYDLKDKTEQETYDLNTKRIKDYKKTSLNKSLHIFQ-EFLR 344
Query: 413 PLLKSCKEE 421
+ KE+
Sbjct: 345 NMEVERKEQ 353
>gi|312071476|ref|XP_003138626.1| DNA primase [Loa loa]
gi|307766209|gb|EFO25443.1| DNA primase [Loa loa]
Length = 414
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 209/407 (51%), Gaps = 47/407 (11%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY RLFP + KW++YG D + F RE +F ++D ++R++SF +E E
Sbjct: 16 YYRRLFPFGPLSKWLTYGKDL------QVSFQMRELAFIFEDDRHVRYRSFEDSTEFERE 69
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ + P KIDIG VY+ P +A F PVERELIFDID+TDYDD+R CCS A
Sbjct: 70 LCKANPQKIDIGAVYNYKPKDHKKFAN-----FRPVERELIFDIDLTDYDDIRTCCSKAK 124
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+C +CW + +A+ V+D L+ FGF H LWV+SGRRG+HCWV D AR+L N R A+
Sbjct: 125 ICRKCWRWICIAVGVLDHLLQRHFGFKHCLWVFSGRRGIHCWVADAAARKLQNAGRMAVV 184
Query: 204 DYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFS---------- 253
+Y + G + +K + +HP L Y+ +++ KL+L Q S
Sbjct: 185 EYLSLITGGQKVSKAATKRTFVHPMLEDVYSYLVQSSDVSKLMLEQGWMSNNGLMSLLDG 244
Query: 254 -TEERYEKILSMIPDESVTSE--------LRGKWQENRRSSNSKEDINFFRWEQLKNTLQ 304
E EK ++ I DE + LR K+ + +R+ K I L+++
Sbjct: 245 CVNEEVEKEITEIIDEVKNVDCLERRWNALRIKFDKYKRAELKKNGIELCEVASLQSSFH 304
Query: 305 SGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCE 364
V YPRLD+ VS NHLLK+PFCVHP+TG + +PI P
Sbjct: 305 ------------FRGYVLQHAYPRLDVHVSVGINHLLKSPFCVHPETGLIAVPIKPDQIS 352
Query: 365 EFDPTTVPTLSELLREL----NTGDSRMDVDN-EWEKTSLGKSIRFF 406
+ + +P + LL E+ G+++ D N E + SLG + F
Sbjct: 353 DVNFAKLPRIDTLLHEILKLHQIGETKKDRRNFEIKHCSLGPYVETF 399
>gi|403222486|dbj|BAM40618.1| DNA primase small subunit [Theileria orientalis strain Shintoku]
Length = 427
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 226/435 (51%), Gaps = 54/435 (12%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD-------NDIYLRFQS 73
L+ YY P D+ +W+SY D + +RE SFT ++IY+R+QS
Sbjct: 14 LRFYYKNFCPVKDLIRWISYE--------DSTILNKREISFTYQKGGMNDVSEIYVRWQS 65
Query: 74 FNSESELENSIKE--KCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
F+ + ++ E P K DIG +YS A H F PV+REL+FDID+ D
Sbjct: 66 FDGSDKFYKTLCEFDTVPFKFDIGAIYSKKIALMHLTTD-----FRPVQRELVFDIDMDD 120
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YD+ R CC+ VC++CW + +A+++I L DFGF +ILWVYSGRRG+HCWVCD KA
Sbjct: 121 YDNYRTCCTDKKVCIKCWRFIKIAVELITRTLEVDFGFKNILWVYSGRRGIHCWVCDSKA 180
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVSFPG-PLHPFLVRSYTEVLREFFEEKLLLSQN 250
R L E R +I DY + +E KKV+ G HP + R++ R F + LL+ QN
Sbjct: 181 RSLPAEGRISIIDYLNLI--SEGYTKKVNVYGMESHPLIARAFDVCYRNF--KDLLVEQN 236
Query: 251 LFSTEERYEKILSMIPDESVTSEL----RGKWQENRRSSNSKED-INFFRWEQLKNTLQS 305
LF ++ +L IP+ + GK + NS D +N R + +
Sbjct: 237 LFKNKQHVNSLLDYIPERYAPARKAVMNAGKVTSSLDFFNSLCDSLNVQRPGEYTTSKAH 296
Query: 306 GKQK-----------VQGLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
V+G R +IV AF+YPRLD+ V+K HLLKAPFCVH K
Sbjct: 297 TSGGSGRSTSGIPGGVRGTRNYFPSFFMDIVIAFSYPRLDVNVTKDIGHLLKAPFCVHAK 356
Query: 351 TGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSF 410
TGR+C+P+D ++ ++F+P +VPT+ L N G + + + + + + +FR F
Sbjct: 357 TGRICVPVDHENMDKFNPQSVPTIESLENFFNRG-------GDPQNSPISQYVVYFREKF 409
Query: 411 LQPLLKSCKEEMESG 425
L + S K+ +G
Sbjct: 410 LSRCIVSTKKGKHNG 424
>gi|355713535|gb|AES04705.1| primase, DNA, polypeptide 1 [Mustela putorius furo]
Length = 220
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 150/215 (69%), Gaps = 9/215 (4%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP+A ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYAQYYRWLNYG------GVIKNYFQNREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
SELE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SELEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICSKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRS 232
R I +Y + KG ++ KKV +HPF+ +S
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHPFVSKS 215
>gi|393224504|gb|EJD32869.1| prim-pol domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 385
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 207/373 (55%), Gaps = 26/373 (6%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L++YY ++P +F W+++G S F +REF+ L N +R Q F + +L
Sbjct: 19 LRLYYTHVYPFKALFLWLNHG------VAPTSLFTKREFAMKLSNGRLIRRQFFQTVEQL 72
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAP--VERELIFDIDITDYDDVRYC 138
+ + + ++ +IG +Y P + +++ AP + +E + DIDIT YDD+R C
Sbjct: 73 QKRLCQCGATRFEIGAIYDDPPVAQSSFS-------APQRLRKEFVIDIDITAYDDIRTC 125
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C+G +C CW + AI V++ +LR FG+ ILWV+SG+RGVHCWV D A L +
Sbjct: 126 CTGKRICRRCWGFLAAAINVLEASLRLQFGYKSILWVFSGQRGVHCWVSDDSAIELKDAH 185
Query: 199 RGAIADYFRVYKGNENSN------KKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
R A + V K + + PLHP ++R T + F + +L +Q+ F
Sbjct: 186 RHAALGWLDVLKNAKGLKTSPAIRRSADLNSPLHP-MIRFATSKIPCNFNQLILTTQDAF 244
Query: 253 STEERYEKILSMIPDESV-TSELRGKWQ-ENRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
+ E+R+ +L + S+ S L W+ E R S K D + L + + +
Sbjct: 245 AWEDRWRCLLGKLSGGSLFQSSLAAAWEAEPERCSLDKWDDILAEAKDLPGYV--SRPRR 302
Query: 311 QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT 370
GL++ +E++V YPRLD++VS+ HLLKAPFCVHP TGR+C+PIDP EEF+P +
Sbjct: 303 IGLQKSMEDMVLQCMYPRLDVQVSRRSEHLLKAPFCVHPDTGRICVPIDPSTVEEFNPDS 362
Query: 371 VPTLSELLRELNT 383
VPTL+++L E++T
Sbjct: 363 VPTLTDILEEIST 375
>gi|45184841|ref|NP_982559.1| AAR018Wp [Ashbya gossypii ATCC 10895]
gi|44980450|gb|AAS50383.1| AAR018Wp [Ashbya gossypii ATCC 10895]
gi|374105758|gb|AEY94669.1| FAAR018Wp [Ashbya gossypii FDAG1]
Length = 436
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/410 (37%), Positives = 224/410 (54%), Gaps = 41/410 (10%)
Query: 6 PKQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDN 65
P GN P + Y YY L+P IF W+ N P D RE + +
Sbjct: 31 PASGNGGPSMSDMQY---YYQYLYPFRPIFHWL---NHSPKPQRD---MVNRELAMAFRS 81
Query: 66 DIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIF 125
Y R+ SF S E + I++ P + +IG VY+ P R + + P+E+EL+F
Sbjct: 82 GAYKRYNSFGSVQEFKQQIQKANPDRFEIGAVYNKPPRDRDSVLK---TEMKPLEKELVF 138
Query: 126 DIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCW 185
DID+ DYDD R CCSGA VC +CW + +A+KV++T+L +DFG + +WV+SGRRG HCW
Sbjct: 139 DIDMDDYDDFRTCCSGAQVCDKCWKFIFLAMKVMNTSLIEDFGLEQFIWVFSGRRGAHCW 198
Query: 186 VCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKL 245
+ D +AR L++ QR ++ DY V + + N K++SF P HP L RS +L+ +F + +
Sbjct: 199 ISDPRARSLSDMQRKSVLDYMNVVR-DRNLEKRISFTRPYHPHLARSLN-ILKPYFVDFI 256
Query: 246 LLSQNLFSTEERYEK-ILSMIPDESVTSELRGKWQENR-RSSNSKEDINFFRWEQLKNTL 303
L Q+ + + + +L I D + +L+ W+EN RSS K W+ + + L
Sbjct: 257 LREQDPWQDDSAAVRLLLPAIQDAQLADQLKKYWKENPGRSSEEK-------WKDI-DLL 308
Query: 304 QSGKQK-------VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCI 356
SG K V LR E+++ A YP+LD+EV+K HLLKAPFC+HP TG VC+
Sbjct: 309 ASGMTKQAKRPDYVARLREAKEDLILAILYPKLDVEVTKQTIHLLKAPFCIHPATGNVCV 368
Query: 357 PIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFF 406
PI E+F PT VP L +L E+ + N+ E+TSL I F
Sbjct: 369 PI----TEDFSPTGVPKLIQLQHEMESN------GNKVEQTSLQPYIDAF 408
>gi|403216120|emb|CCK70618.1| hypothetical protein KNAG_0E03610 [Kazachstania naganishii CBS
8797]
Length = 411
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 207/380 (54%), Gaps = 29/380 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L+ YY R +P A +F+W++ G + P + ++ RE + + Y R+ S N+ +E
Sbjct: 20 LEFYYSRAYPFAPVFRWLNGGPED-QPTQNVTH---RELAMAFRSGAYKRYVSVNTLAEF 75
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+++ P + ++G VYS P +R + + + +EL+FDID+ DYD R CC
Sbjct: 76 AETVRRLNPDRFEVGAVYSRPPKERDSLLKSE---LVALRKELVFDIDMDDYDSYRTCCQ 132
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
GA VC CW + +AI+VI TALR+DFGF +WV+SGRRG HCWV D +A +T++QR
Sbjct: 133 GARVCTRCWRFIQLAIEVIGTALREDFGFSTFVWVFSGRRGAHCWVSDPRAMAMTDQQRR 192
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
+Y V + + + K+++ P HP L RS E+L+ F LL Q+ + + R
Sbjct: 193 NTLEYLNVVR-DRTAAKRLNLVRPYHPLLARSL-ELLKPHFANLLLEDQDPWRDDTRARA 250
Query: 261 -ILSMIPDESVTSELRGKWQEN--RRSSNSKEDINFFRWEQLKNTLQSGKQKVQG-LRRC 316
+L+ + D+S+ L +W E R SS DI+ +K + +Q L C
Sbjct: 251 TLLTALHDKSLAETLSKQWTEQPGRSSSEKWRDIDTAA-ASIKFPSTARRQDFHAKLHEC 309
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
E+IV A YP+LD+EV+K +HLLKAPFCVHP TG +C+PI D F P + P L
Sbjct: 310 KEDIVMATLYPKLDVEVTKLTSHLLKAPFCVHPATGNICVPI--LDPLTFTPDSAPKL-- 365
Query: 377 LLRELNTGDSRMDVDNEWEK 396
+ + EWEK
Sbjct: 366 -----------ITIQQEWEK 374
>gi|170591316|ref|XP_001900416.1| DNA primase, eukaryotic-type, small subunit family protein [Brugia
malayi]
gi|158592028|gb|EDP30630.1| DNA primase, eukaryotic-type, small subunit, putative family
protein [Brugia malayi]
Length = 408
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 204/389 (52%), Gaps = 36/389 (9%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY RLFP + KW++YG D + F RE +F ++D + R++SF ++ E
Sbjct: 16 YYRRLFPFEPLCKWLAYGEDF------QVSFQMRELAFVFEDDRHARYRSFEDSADFERE 69
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ + P KIDIG VY+ P +A F PVERELIFDID+TDYDD+R CCS A
Sbjct: 70 LCKANPQKIDIGAVYNYKPKDHKKFAD-----FHPVERELIFDIDLTDYDDIRTCCSKAK 124
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
VC +CW +++A+ +++ L+ FGF H LWV+SGRRG+HCWV D AR+L N R A+
Sbjct: 125 VCRKCWRWISIAVGILNYLLQRHFGFKHCLWVFSGRRGIHCWVADAVARKLQNAGRMAVV 184
Query: 204 DYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFE----EKLLLSQNLFSTE---- 255
+Y + G + +K S +HP + Y +++ +L+L Q S +
Sbjct: 185 EYLSLVTGGQKISKAASKRAFVHPMVEDVYNYLMQWSLSVPDVGELMLEQGWMSNDGLMS 244
Query: 256 -------ERYEKILSMIPDESVTSE-LRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGK 307
E EK +S I E T + L+ +W R + + R E KN ++ +
Sbjct: 245 LLDGCVNEEVEKEISEIIVEVKTVDCLKKRWNALRIKFD-----KYKRAELKKNGIELCE 299
Query: 308 QKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFD 367
V YPRLD+ VS NHLLK+PFCVHPKTG + +PI+P D
Sbjct: 300 VASPQSSFHFRGYVLQHAYPRLDIHVSTGINHLLKSPFCVHPKTGLIAVPINPNQISNMD 359
Query: 368 PTTVPTLSELLREL----NTGDSRMDVDN 392
+ +P + LL E+ + G+++ D N
Sbjct: 360 ISKLPRIDTLLHEILKLDHNGETKEDQRN 388
>gi|167376204|ref|XP_001733902.1| DNA primase small subunit [Entamoeba dispar SAW760]
gi|165904821|gb|EDR29967.1| DNA primase small subunit, putative [Entamoeba dispar SAW760]
Length = 380
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 216/413 (52%), Gaps = 62/413 (15%)
Query: 22 KVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELE 81
K YY + FP +KW++ +K Y RE SFT+ ++ Y+R+Q F S EL+
Sbjct: 12 KEYYDKSFPVETFYKWITR---------NKKYSDTRELSFTMSDESYIRYQHFKSNEELK 62
Query: 82 NSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSG 141
+KEK P K DIG V+ G N P+ RE I DID+ +Y+DVRYCC G
Sbjct: 63 RKLKEKVPIKFDIGAVFD-------KLLIGVTN--TPLLREFIIDIDMDEYNDVRYCCQG 113
Query: 142 ADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGA 201
++C +CW L+ A++V++ L + FGF+HIL V+SGRRG+H WVCD A +T+ R
Sbjct: 114 TNICKKCWTLLVAAVQVLNYILHEQFGFNHILNVFSGRRGIHIWVCDDIAMEMTDTLRMN 173
Query: 202 IADYFRVYKGNENSNKKVSF---PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
I Y +++ +++ S+ PG H SY ++L F K L + +F ER
Sbjct: 174 IVQYLNLFEAKHTNSQNESYIVIPGR-HSLFDDSY-QILEPLF-NKYLQDEQIFECSERR 230
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
+ + +IP TS+ + + KED+ W+ +K L + +Q
Sbjct: 231 SRFIRLIP----TSK--------QSQCDEKEDLT---WDYVKKILSDDPKALQ------- 268
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
IVF + YPRLD+ VS RNHLLKAPFC+HP TG VC+PI +FD T VPTL +
Sbjct: 269 RIVFTYLYPRLDINVSMKRNHLLKAPFCIHPATGNVCVPIPFNKIIDFDVTRVPTLISVQ 328
Query: 379 RE------------LNTGDSRMDVDNEWE---KTSLGKSIRFFRSSFLQPLLK 416
E + DS + DNE + K S + ++FF SF+ L++
Sbjct: 329 EERENKTEIIQNNRMEEEDSYNNSDNENDQKPKYSYKEFVQFF-DSFVNDLIQ 380
>gi|68076689|ref|XP_680264.1| small subunit DNA primase [Plasmodium berghei strain ANKA]
gi|56501173|emb|CAH99758.1| small subunit DNA primase, putative [Plasmodium berghei]
Length = 368
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 205/359 (57%), Gaps = 36/359 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGND-GRHPAC-DKSYFGRREFSFTLDN------DIYLRFQ 72
L YY L P D+ W++Y ND G++ D ++F +REFSFT +IY+R+
Sbjct: 19 LIFYYRNLCPINDLCNWLNYKNDNGKYTRLNDPNFFSKREFSFTCKKCDQGKEEIYMRWL 78
Query: 73 SFNSESELENSIKEK-CPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
SFNS +E ++ + P K DIG VY+ +++ Q GD+ F P+++ELIFDID+ D
Sbjct: 79 SFNSANEFKDKLLSNFVPIKFDIGAVYNYPVSQK---CQKGDS-FRPIQKELIFDIDMND 134
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YDD+R CC+ VC CW +T+AI ++DT+LR+DF F +ILWVYSGRRG+HCWVCD
Sbjct: 135 YDDIRTCCADKKVCKLCWKFLTIAIVLLDTSLREDFAFQNILWVYSGRRGIHCWVCDESC 194
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREFFEEKLLLSQN 250
R T + R A+ADY + G++ KKVS G +P L R++ + F + LL Q+
Sbjct: 195 RHYTTDARAALADYLNILSGSDTKKKKVSIWGKEKYPMLERAFDICYKYF--DVLLEEQD 252
Query: 251 LFST-EERYEKILSMIPDESVTSELRGKWQENRRSSNSKE--DINFFRWEQLKNTLQS-- 305
F +KI +P TS ++ R + KE D N F +QL L +
Sbjct: 253 FFKKGSPHVQKIFDYLP---YTSTKNADPMKSTRINEFKEFVDNNNFNSKQLFEKLSTIY 309
Query: 306 ----------GKQKVQG--LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
K++ Q + ++EIVF FTYPRLD+ VSK NHLLK+PFC+H TG
Sbjct: 310 GFSIPINYLKKKEENQNPVIPSYIKEIVFHFTYPRLDINVSKEINHLLKSPFCIHNGTG 368
>gi|341877685|gb|EGT33620.1| hypothetical protein CAEBREN_07229 [Caenorhabditis brenneri]
Length = 411
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 200/385 (51%), Gaps = 44/385 (11%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P L +YY FP KW+ YG YF RREF+F L +D+++R++S++ E
Sbjct: 9 PQDLSIYYKNFFPVKPFVKWLRYG------LGFGDYFNRREFAFILADDVHIRYRSYHDE 62
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPA--KRHAYAQGGDNVFAPVERELIFDIDITDYDDV 135
++ P K+DIG VY+ +P KRH Q VEREL+FDID+TDYD V
Sbjct: 63 HTFFKALTSTNPEKLDIGAVYNHEPVNNKRHTDYQA-------VERELVFDIDLTDYDPV 115
Query: 136 RYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
R CC A VC +CW M +A+K++D L D FGF +WV+SGRRGVHCWV D KAR L
Sbjct: 116 RNCCKDATVCPKCWKFMVLAVKILDFQLEDMFGFKARMWVFSGRRGVHCWVGDKKARMLN 175
Query: 196 NEQRGAIADYFRVYKGN------ENSNKKVSFPGPLH-PFLVRSYTEVLREFFEEKLLLS 248
N QR AIA ++K N E K+ P + F V + E E+ L
Sbjct: 176 NSQRSAIATRLNLFKKNGQCEVTEGKQKQTRVPPIVRDAFNVAMQDGIFEEMVYEQGWLD 235
Query: 249 QNLFSTEERY-----EKILSMIPDESVTSE-----LRGKWQENRRSSNSKEDINFFRWEQ 298
N F T+ Y K L + D+ TS+ +RG + E R + ++D Q
Sbjct: 236 NNDFLTDYPYLSDSLRKDLIELLDKCETSQQKWHIIRGIFDEEYRKNLDEKDAATGLNAQ 295
Query: 299 LKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
+++ R + V YPRLD+ VS NHLLK+PFC+HPKTG V +P+
Sbjct: 296 MRD------------RHALLYFVLQRCYPRLDVNVSTGTNHLLKSPFCIHPKTGNVAVPL 343
Query: 359 DPKDCEEFDPTTVPTLSELLRELNT 383
+ + EFD + P + ++ EL++
Sbjct: 344 NVEKIGEFDVSNCPRIDHVVEELSS 368
>gi|380793317|gb|AFE68534.1| DNA primase small subunit, partial [Macaca mulatta]
Length = 210
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 146/210 (69%), Gaps = 9/210 (4%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P LK+YY RLFP++ ++W++YG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 10 PELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQ 63
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
S+LE +++ P KIDIG VYS P + + G F E+EL+FDID+TDYDDVR
Sbjct: 64 SDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGA---FQAQEKELVFDIDMTDYDDVRR 120
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCS AD+C +CW LMT+AI++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++
Sbjct: 121 CCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSA 180
Query: 198 QRGAIADYFRVYKGNENSNKKVSFPGPLHP 227
R I +Y + KG ++ KKV +HP
Sbjct: 181 VRSGIVEYLSLVKGGQDVKKKVHLSEKIHP 210
>gi|392896160|ref|NP_001255015.1| Protein PRI-1, isoform a [Caenorhabditis elegans]
gi|464461|sp|P34471.1|PRI1_CAEEL RecName: Full=DNA primase small subunit
gi|3877820|emb|CAA80161.1| Protein PRI-1, isoform a [Caenorhabditis elegans]
Length = 410
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 204/392 (52%), Gaps = 58/392 (14%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P L +YY FP KW+ YG + + YF RREF+F L +D+++R++S+N E
Sbjct: 9 PQDLPIYYKNFFPVKPFTKWLRYGQN------NGDYFNRREFAFILADDVHIRYRSYNDE 62
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPA--KRHAYAQGGDNVFAPVERELIFDIDITDYDDV 135
++ P K+DIG VY+ +P KRH Q VEREL+FDID+TDYD V
Sbjct: 63 HAFFKALSSTNPEKLDIGAVYNHEPINNKRHTDYQA-------VERELVFDIDLTDYDPV 115
Query: 136 RYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
R CC A VC +CW M +A+K++D L D F F +WV+SGRRGVHCWV D KAR L
Sbjct: 116 RNCCKDATVCPKCWKFMVLAVKILDFQLEDMFDFKARMWVFSGRRGVHCWVGDKKARMLN 175
Query: 196 NEQRGAIADYFRVYKGN------ENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQ 249
N QR AIA ++K N E K P P + ++ L++ EK++ Q
Sbjct: 176 NYQRSAIATRLNLFKKNGQCEVTEGRAKMTKVP----PIVRDAFNVALKDGVFEKMIYDQ 231
Query: 250 NLFSTEERYE--KILSMIPDESVTS-------------ELRGKWQENRRSSNSKED--IN 292
E+ K +S + + + S +RG + ++ R S S +D ++
Sbjct: 232 GWLDKEDFITEYKFMSEVGRDDLRSLSETYKTPQERWNMIRGLFDDDYRKSLSPKDGLLD 291
Query: 293 FFRWEQLKNTLQSGKQKVQGL-RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKT 351
F K+QG R + V YPRLD+ VS NHLLK+PFC+HPKT
Sbjct: 292 F---------------KMQGRDRNYLLYFVLQRCYPRLDVNVSTGTNHLLKSPFCIHPKT 336
Query: 352 GRVCIPIDPKDCEEFDPTTVPTLSELLRELNT 383
G V +P++ EEFD + P + ++ EL++
Sbjct: 337 GNVAVPLNVGKIEEFDVSKCPRIDHVVEELSS 368
>gi|149238387|ref|XP_001525070.1| hypothetical protein LELG_04102 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451667|gb|EDK45923.1| hypothetical protein LELG_04102 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 447
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 205/395 (51%), Gaps = 56/395 (14%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YY RL P IF W+S+ P K F REF++ + Y R+ S++S + +
Sbjct: 67 YYKRLLPFKHIFTWLSHS-----PKITKD-FTMREFAYEYRSGAYQRYNSYSSLDDFKQQ 120
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ P++ +IG VY V P +R + +EL+FDID+TDYDD+R CCSG
Sbjct: 121 VITANPTRFEIGAVYKVSPKERRNLPK---QAMKAQSKELVFDIDLTDYDDIRTCCSGTA 177
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+C +CW + V ++++ ALR+DFGF+H++WV+SGRRG HCW+ D +AR L R AI
Sbjct: 178 ICTKCWKFIQVGAEILELALRNDFGFEHMVWVFSGRRGAHCWISDERARNLDEGSRRAIV 237
Query: 204 DYFRVYKGNEN-----SNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTE--- 255
+Y V G + K+ P+HP + RS+ E+LR F E +L Q+ + T
Sbjct: 238 EYLDVLGGKHSGVGSKGGAKLHVKKPMHPHVERSF-EILRTRFIEIILEDQDPWMTHGGM 296
Query: 256 ------------------ERYEKILSMIPDESVTSELRGKWQENR---RSSNSK---EDI 291
+ ++ L IP++ + EL+ KW + S+S+ EDI
Sbjct: 297 KEEGGIDNSQDDNKSDNWSKVDEFLLFIPNKDLRVELQKKWMTEANLGKISHSREIWEDI 356
Query: 292 NFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKT 351
N + LK+ Q + L ++I+ + YPRLD+EVS+ HL+KAPFC+HP T
Sbjct: 357 NTVASKVLKSQSQ-----IAYLIEAKKDIIIYYLYPRLDVEVSRQVIHLVKAPFCIHPGT 411
Query: 352 GRVCIPIDPK---------DCEEFDPTTVPTLSEL 377
G VC+ D + D F+P T P L +L
Sbjct: 412 GNVCVLFDRERNISGNSDDDDYGFNPMTAPDLKQL 446
>gi|308501853|ref|XP_003113111.1| CRE-PRI-1 protein [Caenorhabditis remanei]
gi|308265412|gb|EFP09365.1| CRE-PRI-1 protein [Caenorhabditis remanei]
Length = 410
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 201/395 (50%), Gaps = 49/395 (12%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P L +YY FP KW+ YG YF RREF+F L +D+++R++S++ E
Sbjct: 9 PQDLPIYYKNFFPAKPFVKWLRYG------LSYGDYFNRREFAFILADDVHIRYRSYHDE 62
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPA--KRHAYAQGGDNVFAPVERELIFDIDITDYDDV 135
++ P K+DIG VY+ +P KRH Q VEREL+FDID+TDYD +
Sbjct: 63 LSFFKALTSTNPEKLDIGAVYNHEPINNKRHTDYQA-------VERELVFDIDLTDYDPI 115
Query: 136 RYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
R CC A VC +CW M +A+K++D L D FGF +WV+SGRRGVHCWV D KAR L
Sbjct: 116 RNCCKNATVCQKCWKFMVLAVKILDFQLDDMFGFKARMWVFSGRRGVHCWVGDKKARMLN 175
Query: 196 NEQRGAIADYFRVYKGN------ENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQ 249
N QR AIA ++K N E K P P + ++ +++ EK++L Q
Sbjct: 176 NTQRSAIATRLNLFKKNGHCEVTEGRAKMTRVP----PIVRDAFNVAMKDGIFEKMVLEQ 231
Query: 250 NLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQK 309
+ + ++ R + + + + E+ RW L++ G ++
Sbjct: 232 GWLENSD-------FLDYPYLSEGFRKQMLDLLETFKTPEE----RWHMLRSVFDEGYRR 280
Query: 310 -------------VQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCI 356
V R + V YPRLD+ VS NHLLK+PFC+HPKTG V +
Sbjct: 281 NLTSNDGLQDVMPVMRDRNFLLYFVLQRCYPRLDVNVSTGTNHLLKSPFCIHPKTGNVAV 340
Query: 357 PIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVD 391
P++ + +EFD + P + ++ EL++ + + D
Sbjct: 341 PLNVEKIDEFDVNSCPRIDRVVEELSSLLAEREAD 375
>gi|325091678|gb|EGC44988.1| DNA primase [Ajellomyces capsulatus H88]
Length = 343
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 185/330 (56%), Gaps = 56/330 (16%)
Query: 154 VAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNE 213
+AIKVIDTALRDDFGF+HILWVYSGRRG H WVCD +AR L +++R AIA Y V +G
Sbjct: 1 MAIKVIDTALRDDFGFEHILWVYSGRRGAHAWVCDPRARSLPDDRRKAIAGYLEVIRGGS 60
Query: 214 NSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSE 273
S KKV+ PLHP + RS E+L+ F +L++Q+ FS + E++L+++PD+ +
Sbjct: 61 QSGKKVNLKRPLHPHVSRSL-EILKPHFASTILVAQDTFSNPAQAEQLLALLPDKPLADA 119
Query: 274 LRGKWQEN-RRSSNSK-EDIN-FFRWEQLKNTLQSGKQKV--QGLRRCVEEIVFAFTYPR 328
LR KW RSS SK DI+ + + + +G+Q + + L ++I +TYPR
Sbjct: 120 LRRKWDSAPERSSTSKWNDIDAVAKSAKSRGAAAAGQQSLDTKALLEAKQDIALEYTYPR 179
Query: 329 LDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGD--- 385
LD EVSK HLLK+PF VHP TGRVC+PID + E+FDP +VPT+ EL+ E+N D
Sbjct: 180 LDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDIRRVEQFDPLSVPTVGELIAEINAWDGGE 239
Query: 386 ----------------------------------------SRMDVDN------EWEKTSL 399
S DVD ++EKTSL
Sbjct: 240 GGSKENGSNGTNDVVKDEQMAGDVDFDPGAGVGAGGAGLSSAADVDGKGRRVQDYEKTSL 299
Query: 400 GKSIRFFRSSFLQPLLKSCKEEMESGYKAK 429
I +FR SF+ LLK+ + +G + +
Sbjct: 300 KPYIDYFR-SFVAGLLKAERAGAGAGKRGR 328
>gi|183230675|ref|XP_649456.2| DNA primase small subunit [Entamoeba histolytica HM-1:IMSS]
gi|169802811|gb|EAL44069.2| DNA primase small subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709467|gb|EMD48729.1| DNA primase small subunit, putative [Entamoeba histolytica KU27]
Length = 380
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 193/362 (53%), Gaps = 46/362 (12%)
Query: 22 KVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELE 81
K YY + FP +KW++ +K Y RE SFT+ ++ Y+R+Q F S EL+
Sbjct: 12 KEYYDKSFPVETFYKWITR---------NKKYSDTRELSFTMFDESYIRYQHFKSSEELK 62
Query: 82 NSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSG 141
+KEK P K DIG V+ G N P+ RE + DID+ +Y+DVRYCC G
Sbjct: 63 RKLKEKVPIKFDIGAVFD-------KLLIGVTN--TPLLREFVIDIDMDEYNDVRYCCQG 113
Query: 142 ADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGA 201
++C +CW L+ A++V++ L + FGF HIL V+SGRRG+H WVCD A +T+ R
Sbjct: 114 TNICEKCWTLLVAAVQVLNYILHEQFGFKHILNVFSGRRGIHIWVCDDSAMEMTDTLRMN 173
Query: 202 IADYFRVYKG-NENS--NKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
+ Y +++ N NS V PG H SY ++L F +K L + + + ER
Sbjct: 174 VVQYLNLFEAKNTNSLNESYVVIPGR-HALFDDSY-QILEPLF-KKYLQDEQILESSERR 230
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
+ + +IP TS+ + KED+ W+ +K L + +Q
Sbjct: 231 SRFIRLIP----TSK--------QSQCEEKEDLT---WDYVKRILNDDPKALQ------- 268
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
IVF + YPRLD+ VS RNHLLKAPFC+HP TG +C+PI +FD T VPTL +
Sbjct: 269 RIVFTYLYPRLDINVSMKRNHLLKAPFCIHPATGNICVPIPFNKIIDFDVTRVPTLISVQ 328
Query: 379 RE 380
E
Sbjct: 329 EE 330
>gi|268573440|ref|XP_002641697.1| C. briggsae CBR-PRI-1 protein [Caenorhabditis briggsae]
Length = 411
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 214/422 (50%), Gaps = 58/422 (13%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L VYY FP KW+ YG Y RREF+F L +D+++R++S++ E
Sbjct: 12 LPVYYKNFFPVKPFIKWLRYG------LGFGEYLNRREFAFILADDVHIRYRSYHDELSF 65
Query: 81 ENSIKEKCPSKIDIGPVYSVDPA--KRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
++ P K+DIG VY+ +P KRH Q VEREL+FDID+TDYD++R C
Sbjct: 66 FKALTSTNPEKLDIGAVYNHEPINNKRHTDYQA-------VERELVFDIDLTDYDNIRNC 118
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C A VC +CW M +A+K++D L D FGF+ +WV+SGRRGVHCWV D KAR LTN
Sbjct: 119 CKEATVCPKCWKFMVLAVKILDFLLDDMFGFNARMWVFSGRRGVHCWVGDKKARMLTNNH 178
Query: 199 RGAIADYFRVYKGN------ENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLF 252
R A+A ++K N E K P P + +Y +++ +++L Q
Sbjct: 179 RSAVATRLNLFKKNGQFEATEGKAKNTRVP----PIVRDAYNIAMKDGTFGEMVLEQGWL 234
Query: 253 STEERYEKILSMIPDESVTSELRGKWQ--ENRRSSNSKEDINFFRWEQLKNTLQSGKQKV 310
++ + DE + ++ +GK + EN ++ E RW L+ ++
Sbjct: 235 ENDD-------FLKDELLLTD-KGKKELIENLEGYDTPEK----RWHALRAMFDEDYRRK 282
Query: 311 QGL-------------RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIP 357
G R + V YPRLD+ VS NHLLK+PFC+HPKTG V +P
Sbjct: 283 LGSENEFKDYHPQGRDRFALHTFVLQKCYPRLDVNVSTGTNHLLKSPFCIHPKTGNVAVP 342
Query: 358 IDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRF--FRSSFLQPLL 415
++ EFD + P + ++ EL + + D E ++ K+ +F ++ L P +
Sbjct: 343 LNVDKIAEFDVSKCPRIDRVVEEL----ASLQADREADENEDSKNRKFLAYKHGLLAPYV 398
Query: 416 KS 417
++
Sbjct: 399 EN 400
>gi|429328863|gb|AFZ80622.1| DNA primase small subunit, putative [Babesia equi]
Length = 425
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 205/371 (55%), Gaps = 37/371 (9%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD-------NDIYLRFQS 73
L+ YY L P ++ +W+SY D + +RE S T N++Y+R+Q+
Sbjct: 74 LRFYYKHLCPVKELIRWVSYE--------DSNVLCKREISLTYQRETSSDTNEVYIRWQT 125
Query: 74 FNSESELENSIKEK--CPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
+ + ++ E+ P K DIG +Y+ +R + Q F VEREL+FDID+ D
Sbjct: 126 YEGVDQFYQTLCERDTVPFKFDIGAIYN----RRVSLMQLSGGDFRAVERELVFDIDMDD 181
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YD+ R CC+ +C +CW + +A+++I L+ DFG+ ILWVYSGRRG+HCWVCD +A
Sbjct: 182 YDEFRTCCTEKKICRKCWRFIRIAVELITKTLQVDFGYKDILWVYSGRRGIHCWVCDKRA 241
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVS-FPGPLHPFLVRSYTEVLREFFEEKLLLSQN 250
R L ++ R AI +Y + G + KKVS F HP + RS+ F + LL+ QN
Sbjct: 242 RELPSDGRIAIIEYLNLITGGDGYVKKVSLFSCEQHPLVQRSFDVCYSNF--KDLLVEQN 299
Query: 251 LFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQ------ 304
L S + IL IP++ + K ++ + S++ ++ F QL ++L
Sbjct: 300 LLSLKH-LPTILEYIPEKQQHAR---KLIQDAINGGSRDSLSLF--NQLCDSLSLPNPHE 353
Query: 305 -SGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDC 363
K+ EIV AF+YPRLD+ V+K HLLK+PFCVH KTGR+C+P+D +
Sbjct: 354 YQSKRDPSVFPYYFIEIVIAFSYPRLDVNVTKDIGHLLKSPFCVHAKTGRICVPVDHEHI 413
Query: 364 EEFDPTTVPTL 374
++F P VPT+
Sbjct: 414 DKFYPENVPTV 424
>gi|348681630|gb|EGZ21446.1| hypothetical protein PHYSODRAFT_360096 [Phytophthora sojae]
Length = 209
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 146/214 (68%), Gaps = 10/214 (4%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFN 75
F+ L++YY RLFP+ I +W+SY DG + + RRE S+TL+ND Y+R+++F+
Sbjct: 6 FSAELLQLYYDRLFPYQQITQWLSY--DG-----GEEFLFRRELSYTLENDTYIRYKAFH 58
Query: 76 SESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDV 135
+ EL+ S+ + P KIDIG V+SV PA + + F P +REL+FDID+TDYDD+
Sbjct: 59 NAEELKASMSKTLPFKIDIGAVFSVSPADKGKVSAAD---FTPEQRELVFDIDLTDYDDI 115
Query: 136 RYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
R CC GA +C CW M A++V++ ALR+DFGF+++LWVYSGRRG+HCWV D +AR L
Sbjct: 116 RTCCEGAAICNRCWQFMVAAVEVLNAALREDFGFENLLWVYSGRRGIHCWVSDEQARALE 175
Query: 196 NEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFL 229
NE R A+ Y + +GNENS +KV PLHP L
Sbjct: 176 NEARSAVVGYLSLVEGNENSARKVKLREPLHPSL 209
>gi|146086480|ref|XP_001465558.1| putative DNA primase small subunit [Leishmania infantum JPCM5]
gi|134069657|emb|CAM67981.1| putative DNA primase small subunit [Leishmania infantum JPCM5]
Length = 450
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 188/347 (54%), Gaps = 24/347 (6%)
Query: 43 DGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDP 102
DG+ A + Y RREF FTL DI+ RF+S+ S EL + P KID+G VY++ P
Sbjct: 88 DGKGAAAAEGYLARREFCFTLIGDIFTRFRSYRSAEELRAELVRCFPEKIDVGAVYNIRP 147
Query: 103 AKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTA 162
++ QG NVF PVEREL+FDID++DYD+VR CCSG +C CW M+ A V+ T
Sbjct: 148 NQK----QGLANVF-PVERELVFDIDMSDYDNVRSCCSGKSICSYCWAWMSCAAHVLHTL 202
Query: 163 LRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGN--------EN 214
LRDDFGF +IL V+SGRRG+H WVCD +ARR+TN++R A+ Y V +
Sbjct: 203 LRDDFGFKYILPVFSGRRGIHLWVCDRRARRMTNDERTALVGYLTVVAPKTLRSTIVADL 262
Query: 215 SNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDE-SVTSE 273
+N ++ P H T++ R F + S + + + + K ++ D S +
Sbjct: 263 ANHRLIHPTIRHVL----RTQLDRAFTALFVASSSDNPNNIQHHPKAAYIVHDATSAVLK 318
Query: 274 LRGKWQENRRSSNSK-EDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDME 332
L + NR + + N W L S ++ L + YPRLD
Sbjct: 319 LGRRDALNRFQQHVHFQQGNVLDWATYLRALGSEQEATDIL----HAVQLLLMYPRLDEH 374
Query: 333 VSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
VS R+HLLK PFCVHP T +C P++ ++ + F+PT P L E+L
Sbjct: 375 VSTRRDHLLKLPFCVHPGTASLCCPLEWEEVDGFNPTEDAPKLHEML 421
>gi|398015175|ref|XP_003860777.1| DNA primase small subunit, putative [Leishmania donovani]
gi|322499000|emb|CBZ34072.1| DNA primase small subunit, putative [Leishmania donovani]
Length = 450
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 188/347 (54%), Gaps = 24/347 (6%)
Query: 43 DGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDP 102
DG+ A + Y RREF FTL DI+ RF+S+ S EL + P KID+G VY++ P
Sbjct: 88 DGKGAAAAEGYLARREFCFTLIGDIFTRFRSYRSAEELRAELVRCFPEKIDVGAVYNIRP 147
Query: 103 AKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTA 162
++ QG NVF PVEREL+FDID++DYD+VR CCSG +C CW M+ A V+ T
Sbjct: 148 NQK----QGLANVF-PVERELVFDIDMSDYDNVRSCCSGKSICSYCWAWMSCAAHVLHTL 202
Query: 163 LRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGN--------EN 214
LRDDFGF +IL V+SGRRG+H WVCD +ARR+TN++R A+ Y V +
Sbjct: 203 LRDDFGFKYILPVFSGRRGIHLWVCDRRARRMTNDERTALVGYLTVVAPKTLRSTIVADL 262
Query: 215 SNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDE-SVTSE 273
+N ++ P H T++ R F + S + + + + K ++ D S +
Sbjct: 263 ANHRLIHPTIRHVL----RTQLDRAFTALFVASSSDNPNNIQHHPKAAYIVHDATSAVLK 318
Query: 274 LRGKWQENRRSSNSK-EDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDME 332
L + NR + + N W L S ++ L + YPRLD
Sbjct: 319 LGRRDALNRFQQHVHFQQGNVLDWATYLRALGSEQEATDIL----HAVQLLLMYPRLDEH 374
Query: 333 VSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
VS R+HLLK PFCVHP T +C P++ ++ + F+PT P L E+L
Sbjct: 375 VSTRRDHLLKLPFCVHPGTASLCCPLEWEEVDGFNPTEDAPKLHEML 421
>gi|84994302|ref|XP_951873.1| DNA primase small subunit [Theileria annulata strain Ankara]
gi|65302034|emb|CAI74141.1| DNA primase small subunit, putative [Theileria annulata]
Length = 397
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 209/386 (54%), Gaps = 52/386 (13%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD-------NDIYLRFQS 73
L+ YY P D+ +W+ Y D S RRE S TL +IYLR+Q+
Sbjct: 14 LRFYYKNFCPIKDLVRWIGYE--------DPSILKRREISLTLHRGDTTNATEIYLRWQT 65
Query: 74 FNS-ESELENSIK-EKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
F S ES E + P K DIG +YS K GD F PVERE++FDID+ D
Sbjct: 66 FESFESVFETLCNSDSVPFKFDIGAIYS---NKISLMQLSGD--FRPVEREIVFDIDMDD 120
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YD+ R CCS VC +CW + +A+++I L++DFGF ++LWVYSGRRG+HCWVCD A
Sbjct: 121 YDEFRTCCSDKKVCNKCWRYIKIAVELITITLKEDFGFVNVLWVYSGRRGIHCWVCDKTA 180
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVS-FPGPLHPFLVRSYTEVLREFFEEKLLLSQN 250
R+L E R +I +Y + ++ KKV+ + HP ++R++ R F + LL QN
Sbjct: 181 RQLPTEGRISIIEYLNLI--SDGFAKKVNLYAIDKHPLVLRAFHICYRNF--KHLLAEQN 236
Query: 251 LFSTEERYEKILSMIPD--ESVTSELRGKWQENRRSSNSKEDINFFR--WEQLKNTLQS- 305
FS + + +L +P+ +V + + +++ NS ++FF + L T
Sbjct: 237 FFSHKTHMKTLLDYVPERHSNVKRSINNCIENSQKRYNS---VDFFNSICDMLNLTRPED 293
Query: 306 --GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKT------------ 351
GK + EI+ AF+YPRLD+ V+K HLLK+PFCVH KT
Sbjct: 294 YVGKVEAGDFPGFFMEIIIAFSYPRLDVNVTKDMGHLLKSPFCVHAKTGTFTISSSNINN 353
Query: 352 ---GRVCIPIDPKDCEEFDPTTVPTL 374
GR+C+P+D ++ ++F+P +VPT+
Sbjct: 354 LGLGRICVPLDHENLDKFNPESVPTI 379
>gi|407042306|gb|EKE41262.1| DNA primase, eukaryotic-type, small subunit protein [Entamoeba
nuttalli P19]
Length = 375
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 215/414 (51%), Gaps = 69/414 (16%)
Query: 22 KVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELE 81
K YY + FP +KW++ +K Y RE SFT+ ++ Y+R+Q F S EL+
Sbjct: 12 KEYYDKSFPVETFYKWITR---------NKRYSDTRELSFTMFDESYIRYQHFKSSEELK 62
Query: 82 NSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSG 141
+KEK P K DIG V+ G N P+ RE + DID+ +Y+DVRYCC G
Sbjct: 63 RKLKEKVPIKFDIGAVFD-------KLLIGVTN--TPLLREFVIDIDMDEYNDVRYCCQG 113
Query: 142 ADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGA 201
++C +CW L+ A++V++ L + FGF HIL V+SGRRG+H WVCD A +T+ R
Sbjct: 114 TNICEKCWTLLVAAVQVLNYILHEQFGFKHILNVFSGRRGIHIWVCDDSAMEMTDTLRMN 173
Query: 202 IADYFRVYKG-NENS--NKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
+ Y +++ N NS V PG H SY ++L F +K L + + + ER
Sbjct: 174 VVQYLNLFEAKNTNSLNESYVVIPGR-HALFDDSY-QILEPLF-KKYLHDEQILESSERR 230
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
+ + +IP TS+ + KED++ W+ + + ++
Sbjct: 231 SRFIRLIP----TSK--------QSQCEEKEDLS---WDYSDDP------------KALQ 263
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL---- 374
IVF + YPRLD+ VS RNHLLKAPFC+HP TG +C+PI +FD T VPTL
Sbjct: 264 RIVFTYLYPRLDINVSMKRNHLLKAPFCIHPATGNICVPIPFNKIIDFDVTRVPTLISVQ 323
Query: 375 ------------SELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLK 416
+++ E + DS D+D E +K S + ++FF SF+ L++
Sbjct: 324 EEQENKIEIIQNNKMEEEDSCNDSYNDMD-EKQKYSYKEFVQFF-DSFVNDLIQ 375
>gi|157869281|ref|XP_001683192.1| putative DNA primase small subunit [Leishmania major strain
Friedlin]
gi|68224076|emb|CAJ04048.1| putative DNA primase small subunit [Leishmania major strain
Friedlin]
Length = 451
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 184/343 (53%), Gaps = 16/343 (4%)
Query: 43 DGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDP 102
+G+ A + Y RREF FTL DI+ RF+S+ S EL + P KID+G VY++ P
Sbjct: 89 NGKGAAAAEGYLARREFCFTLIGDIFTRFRSYRSSEELRAELVRCFPEKIDVGAVYNIRP 148
Query: 103 AKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTA 162
++ QG NVF PVEREL+FDID++DYD+VR CCSG +C CW M+ A V+ T
Sbjct: 149 NQK----QGLANVF-PVERELVFDIDMSDYDNVRSCCSGKSICSYCWAWMSCAAHVLHTV 203
Query: 163 LRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFP 222
LRDDFGF +IL V+SGRRG+H WVCD +ARR+TN++R A+ Y V + V+
Sbjct: 204 LRDDFGFKYILPVFSGRRGIHLWVCDRRARRMTNDERTALVGYLTVVAPKTLRSTIVADL 263
Query: 223 GP---LHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQ 279
+HP + L F + S + ++ + I ++ ++ L+ +
Sbjct: 264 ANHRLIHPTIRHVLRTQLDRAFTSLFVASSSDNPNNIQHHPTAAYIVHDATSAVLKLGRR 323
Query: 280 E--NRRSSNSK-EDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKH 336
+ NR + + N W L S ++ L + YPRLD VS
Sbjct: 324 DALNRFQQHVHFQQGNVLDWATYLRALGSEQEATDIL----HAVQLLLMYPRLDEHVSTR 379
Query: 337 RNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
R+HLLK PFCVHP T +C P++ + + F PT P L E+L
Sbjct: 380 RDHLLKLPFCVHPGTASLCCPLEWDEVDGFHPTEDAPKLHEML 422
>gi|440299961|gb|ELP92486.1| DNA primase small subunit, putative [Entamoeba invadens IP1]
Length = 370
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 187/362 (51%), Gaps = 41/362 (11%)
Query: 22 KVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELE 81
K YY FP D ++W++ DG+ + RE SFT + YLRFQ F+S +E +
Sbjct: 16 KAYYQSCFPTDDFYRWVT--RDGK-------FSDTRELSFTQPDSTYLRFQHFSSSTEFQ 66
Query: 82 NSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSG 141
+ KCP K DIG +Y + GG P RE + DID+ +Y+DVRYCC G
Sbjct: 67 KRLNMKCPLKFDIGAIYD-----KLLTGTGG----VPKLREFVIDIDMDEYNDVRYCCKG 117
Query: 142 ADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGA 201
A VC +CWPL+ A +++ L FGF H+L V+SGRRG+H WVCD A +++ R
Sbjct: 118 ATVCPKCWPLLVSASNLLNFVLVTHFGFKHVLTVFSGRRGLHFWVCDRSAMEMSDLTRNY 177
Query: 202 IADYFRVYKGNENSNKKVSFPGPLHPF-LVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
+ Y +++ + K SF L + ++L F K Q +F + R ++
Sbjct: 178 VVQYLNLFEAKNVNEKGESFVIVKRQHDLFDTAFDILEPIF-GKYCTDQEIFCNQNRRDR 236
Query: 261 ILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEI 320
L +I D S L+ K WE ++ + + +++I
Sbjct: 237 FLRLIGDAKSRSLLQEKGDN-------------LTWEVVRKVITTPLD--------LQKI 275
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
VF + YPRLD+ VS NHLLKAPFC+HP TG+VC+PI D +FD VPT+ E ++E
Sbjct: 276 VFTYLYPRLDINVSTKLNHLLKAPFCIHPGTGKVCVPIHFTDVADFDIKQVPTMEEAIKE 335
Query: 381 LN 382
++
Sbjct: 336 MS 337
>gi|145552023|ref|XP_001461688.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429523|emb|CAK94315.1| unnamed protein product [Paramecium tetraurelia]
Length = 410
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 199/376 (52%), Gaps = 40/376 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSF--TLDND-IYLRFQSFNSE 77
L YY LFP I W+SY D + + YF RREFSF ++D + Y R+Q F +
Sbjct: 13 LHFYYKHLFPIQMIVDWLSYAKDNQP---ELRYFSRREFSFERSIDGETFYQRYQQFQNA 69
Query: 78 SELENSI-------KEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDIT 130
L+ + + K DIG V+ P K G+ + A +E+E++ DID+
Sbjct: 70 YGLQKFLLDNKQNDQTSTLIKYDIGAVFDKLPKK-------GEKLKA-MEKEIVIDIDMD 121
Query: 131 DYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGK 190
YD+VR CC GA +C +CW + VA ++ AL DFG +HIL VYSGRRG+H WVCD
Sbjct: 122 AYDEVRTCCQGAKICEKCWKFLQVACDILRPALFQDFGLEHILAVYSGRRGIHLWVCDSH 181
Query: 191 ARRLTNEQRGAIADYFRVYKGNENSNK-----KVSFPGPLHPFLVRSYTEVLREFFEEKL 245
R+ TNE R AI Y + GN ++ + K LHP + R+Y + ++FF++ +
Sbjct: 182 IRKSTNEVRSAIIGYLNINTGNADAEEIIREVKQEKVEKLHPSIQRAYF-IAQQFFKQII 240
Query: 246 LLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQS 305
L+ QN E +KIL+++ + L K +++ + N I W+ +
Sbjct: 241 LIDQNSLKIENVKKKILTILKQTKI---LNPKLEKSIQEINDSSQI----WDLI------ 287
Query: 306 GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEE 365
Q + L +I+ YPRLD VS NHLLK PF +HPKT RVC+P + K+ +
Sbjct: 288 CSQDSERLEIAKLQIILMCLYPRLDAHVSTTINHLLKGPFSIHPKTQRVCVPFNLKNSSQ 347
Query: 366 FDPTTVPTLSELLREL 381
F+P PTL ++++L
Sbjct: 348 FNPLDTPTLPSIIKQL 363
>gi|401422014|ref|XP_003875495.1| putative DNA primase small subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491733|emb|CBZ27006.1| putative DNA primase small subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 451
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 187/343 (54%), Gaps = 16/343 (4%)
Query: 43 DGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDP 102
DG+ A + Y RREF FTL +I+ RF+S+ S EL + P KID+G VY++ P
Sbjct: 89 DGKGAAAAEGYLARREFCFTLMGEIFTRFRSYRSAEELRAELVRCFPEKIDVGAVYNIRP 148
Query: 103 AKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTA 162
++ QG NVF PVEREL+FDID++DYD+VR CCSG ++C CW M+ A V+ T
Sbjct: 149 NQK----QGLANVF-PVERELVFDIDMSDYDNVRSCCSGKNICSYCWAWMSCAAHVLHTV 203
Query: 163 LRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFP 222
LRDDFGF +IL V+SGRRG+H WVCD +AR +TN++R A+ Y V + V+
Sbjct: 204 LRDDFGFKYILPVFSGRRGIHLWVCDRRARLMTNDERAALVGYLTVVAPKTLRSTVVADL 263
Query: 223 GP---LHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQ 279
+HP + L F + S + ++ + I ++ ++ L+ +
Sbjct: 264 ANHRLIHPTIRHVLRTQLDRAFTALFVASSSDNPNNIQHHPKAAYIVHDATSAVLKLGRR 323
Query: 280 E--NRRSSNSK-EDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKH 336
+ NR + + N W + L S ++ L + YPRLD VS
Sbjct: 324 DTLNRFQQHVHFQQGNVLDWPTYLHALGSEQEATDIL----HAVQLLLMYPRLDEHVSTR 379
Query: 337 RNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
R+HLLK PFCVHP T +C P++ ++ + F+PT P L E+L
Sbjct: 380 RDHLLKLPFCVHPGTASLCCPLEWEEVDGFNPTEDAPKLQEIL 422
>gi|156085138|ref|XP_001610052.1| DNA primase small subunit [Babesia bovis T2Bo]
gi|154797304|gb|EDO06484.1| DNA primase small subunit, putative [Babesia bovis]
Length = 350
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 186/348 (53%), Gaps = 27/348 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDND-------IYLRFQS 73
L+ YY +L P D+ +W+SY +G P RRE SFT D Y+R+QS
Sbjct: 14 LRFYYEKLCPVKDLVRWLSY--EGEKPT---GSLQRREISFTFQRDTGGDVSEFYMRWQS 68
Query: 74 FNSESELENSIKEK--CPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITD 131
F +L++ + E+ P KIDIG +Y+ K Q F VEREL+FDID+ D
Sbjct: 69 FEGHQQLQHMLSERNNVPFKIDIGAIYN----KPVTLMQLSGADFHAVERELVFDIDMND 124
Query: 132 YDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKA 191
YDD+R CC+ +C +CW +++A +++ +L++DFGF+ I+WVYSGRRG+H W+CD KA
Sbjct: 125 YDDLRTCCTDKRICHKCWKFISIAAEILTRSLKEDFGFNEIMWVYSGRRGIHGWICDAKA 184
Query: 192 RRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNL 251
R L NE R AI DY + + + + F HP + R++ R F++ LL QN
Sbjct: 185 RSLPNEARSAIVDYLMLLSADSHKKRVNIFGVEDHPAVNRAFDICYRNFYD--LLQEQNF 242
Query: 252 FSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQ 311
TE + L I D + + + NS E N E T + ++K
Sbjct: 243 LVTEAHIQSSLEYITDRFPKARQLLQRALKTKVKNSVELFNEICEELEVETPEEYRRKNT 302
Query: 312 GLR-------RCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
G+ +E+V AF+YPRLD V+K HLLKAPFC+H KTG
Sbjct: 303 GVNINRDAFPVAFKELVLAFSYPRLDAAVTKDVGHLLKAPFCIHAKTG 350
>gi|225678634|gb|EEH16918.1| DNA primase small subunit [Paracoccidioides brasiliensis Pb03]
Length = 333
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 179/331 (54%), Gaps = 65/331 (19%)
Query: 154 VAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNE 213
+AIKVIDTALR+DFGF+H+LWVYSGRRG H WVCD KAR L++++R AIA Y V +G
Sbjct: 1 MAIKVIDTALREDFGFEHVLWVYSGRRGAHAWVCDAKARSLSDDRRKAIAGYLEVVRGGS 60
Query: 214 NSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSE 273
S K+V+ PLHP + RS E+L+ +F +L Q+ FS+ + E++LS++PD+ +
Sbjct: 61 QSGKRVNIKRPLHPHVARSL-EILKPYFASTILGDQDTFSSAAQAEQLLSLLPDKPLVDA 119
Query: 274 LRGKWQEN-RRSSNSKEDINFFRWEQLKNTLQSGKQK-----------------VQGLRR 315
LR KW RSS SK W + +S + + + L
Sbjct: 120 LRKKWDSAPGRSSTSK-------WNDIDALAKSVRSRGPDGKGKGGVGGGKALDTKALLE 172
Query: 316 CVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLS 375
++I +TYPRLD EVSK HLLK+PF VHP TGRVC+PID + E+FDP VPT+S
Sbjct: 173 AKQDIALEYTYPRLDAEVSKKLIHLLKSPFVVHPGTGRVCVPIDVRRVEDFDPLDVPTVS 232
Query: 376 ELLRELNTGDSR--------------------------------MDVDN------EWEKT 397
L+ E+N D DVD ++EKT
Sbjct: 233 RLIAEINEWDRDEGKRKGEGAVAKDEEVNGDGIDGVGGGVPSCVADVDGKGRRLQDYEKT 292
Query: 398 SLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
SL I +FR SF+ L+K+ + +E +A
Sbjct: 293 SLKPYIDYFR-SFVAGLIKAERAGVEKRGRA 322
>gi|297852518|ref|XP_002894140.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339982|gb|EFH70399.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 199
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 138/186 (74%), Gaps = 3/186 (1%)
Query: 210 KGNENSNKKVSFPGPLH-PFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDE 268
KGNENS K V G H PFL RS + L+ FFE++L +Q++FS++E+YEKIL MI DE
Sbjct: 15 KGNENSAKNVDLMGHSHQPFLARSCVDFLKNFFEDELHATQSIFSSKEKYEKILGMITDE 74
Query: 269 SVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPR 328
+ SELRG+W+ + RSS S+E + RWEQLK TLQS K LR CVEEIVF F YPR
Sbjct: 75 DIQSELRGEWKNSARSSPSEEATSLLRWEQLK-TLQSKNNKALSLRTCVEEIVFNFIYPR 133
Query: 329 LDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELLRELNTGDSR 387
+D+EVSK NHLLKAPFCVHP TGRVC+PIDP +C+EFDP VPTLS+++ E+N+
Sbjct: 134 IDLEVSKKMNHLLKAPFCVHPNTGRVCVPIDPNNCDEFDPLLEVPTLSQIIEEINSAGLN 193
Query: 388 MDVDNE 393
MDVD++
Sbjct: 194 MDVDDD 199
>gi|154337447|ref|XP_001564956.1| putative DNA primase small subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061995|emb|CAM45081.1| putative DNA primase small subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 450
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 187/347 (53%), Gaps = 24/347 (6%)
Query: 43 DGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDP 102
DG+ A + Y RREF FTL DI+ RF+S+ S EL + P KID+G VY++ P
Sbjct: 88 DGKGAAAAEGYLARREFCFTLIGDIFTRFRSYRSAEELRAELLRCFPEKIDVGAVYNIRP 147
Query: 103 AKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTA 162
++ QG NVF PVEREL+FDID++DYD+VR CC+G VC CW M+ A V+ T
Sbjct: 148 NQK----QGLANVF-PVERELVFDIDMSDYDNVRSCCTGKSVCAYCWAWMSCAAHVLHTV 202
Query: 163 LRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGN--------EN 214
LRDDFGF ++L V+SGRRG+H WVCD +AR +TN++R A+ Y V +
Sbjct: 203 LRDDFGFKYVLPVFSGRRGIHLWVCDRRARLMTNDERTALVGYLAVVAPKTLRSTIVADL 262
Query: 215 SNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSEL 274
+N ++ P H ++R T+V R F + S + + + + K ++ D ++
Sbjct: 263 ANHRLVHPTIRH--ILR--TQVDRAFTGLFVTSSSDNPNNIQHHTKAACIVHDATLAVLK 318
Query: 275 RGKWQENRRSSNSK--EDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDME 332
G+ R + + W L S ++ L + YPRLD
Sbjct: 319 LGRRDALNRFQQHLHFQQGSVLDWSVYLRALGSEQEATDIL----HAVQLLLLYPRLDEH 374
Query: 333 VSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
VS R+HLLK PFCVHP T +C P++ + + F+PT P L E+L
Sbjct: 375 VSTRRDHLLKLPFCVHPGTSYLCCPLEWDNVDAFNPTEDAPRLQEVL 421
>gi|66808481|ref|XP_637963.1| DNA polymerase alpha primase subunit [Dictyostelium discoideum AX4]
gi|60466406|gb|EAL64461.1| DNA polymerase alpha primase subunit [Dictyostelium discoideum AX4]
Length = 409
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 211/381 (55%), Gaps = 46/381 (12%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLD---NDIYLRFQSFNSE 77
L+ YY +LFP ++ W++ + K F RREFS ++ + +R +SFN
Sbjct: 22 LREYYDKLFPFDLLYDWLTINSINEKEEDKKRAFERREFSVRINKVSSSFVIRNKSFNRV 81
Query: 78 SELENSIKEK--------CPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
+L+ +K + P ++DIGP+ S +P+K+ + + PV +EL+FDID+
Sbjct: 82 EDLKEFLKGRQNIDGVYEVPERLDIGPICSWEPSKKATVSD-----YQPVSKELVFDIDV 136
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
DY+ +R CCS +C +CW + V+ + ID LR+ FGF I++V+SGRRG+H WV D
Sbjct: 137 DDYNPIRVCCSSTSLCEKCWGFLAVSAEFIDNYLRECFGFQQIMYVFSGRRGLHIWVSDR 196
Query: 190 KARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQ 249
A+ LT E R +I ++ RV E S ++ P L RS+ ++L FE+ ++ Q
Sbjct: 197 AAQHLTRENRASILNHIRV----ELSQNQI-------PILKRSFDQILLPHFEKCIIEEQ 245
Query: 250 NLFSTEERYEKILSMIP------DESVT----SELRGKWQENRRSSNSKEDINFFRWEQL 299
+F+ E++ + LS++P D +T ++ K +E + + S +I W +
Sbjct: 246 QIFTNEKQRKNFLSLLPISYKRQDRKITLTPSEDIEKKLKEIQDENLSNSEI----WFAV 301
Query: 300 KNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID 359
K+ L+ L+ + +VF +T PR+D V+ +HLLK+PFC+HP T ++C+P+D
Sbjct: 302 KSYLEDN-----NLKEHLYNLVFHYTMPRIDEPVTIGLDHLLKSPFCIHPDTKKLCVPLD 356
Query: 360 PKDCEEFDPTTVPTLSELLRE 380
+ +F+P VPT+ +L+ +
Sbjct: 357 INEIYKFNPNQVPTVDQLIND 377
>gi|340054574|emb|CCC48874.1| putative DNA primase small subunit [Trypanosoma vivax Y486]
Length = 408
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 189/390 (48%), Gaps = 38/390 (9%)
Query: 16 FNPNYLKVYYGRLFPHADIFKWMSY--------------------GNDGRHPACDKSYFG 55
N L+ +Y +FP + +W+SY G R Y
Sbjct: 2 LNETSLREFYEFVFPADLLVQWLSYNLSSVEQSTHNTVLAKGDDAGEGQRSAVSSDGYLA 61
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
RREF FTL DI+ RF+S++S +EL + P KID+G VY++ P ++ +
Sbjct: 62 RREFCFTLIGDIFTRFRSYSSAAELRRELIRCYPEKIDVGAVYTIRPNQKQSVG-----T 116
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWV 175
PVEREL+FDID++DYD VR CCSG +C CW ++ A V+ T L+DDFGF +IL V
Sbjct: 117 ILPVERELVFDIDMSDYDSVRSCCSGKSICQVCWLWVSCAADVLRTVLQDDFGFRYILPV 176
Query: 176 YSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVS--FPG-PLHPFLVRS 232
+SGRRG+H WVCD +A ++ +++R A+ Y V + G P+HP +
Sbjct: 177 FSGRRGIHLWVCDKRACKMHDDERAALVGYLAVVLPKAPRQAVIGDIVSGRPIHPTIRHV 236
Query: 233 YTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQ--ENRRSSNSK-E 289
T V+ F L S + K ++ D V+ G + E R N E
Sbjct: 237 LTTVIEPAFSALFLNSSPANPNSVAHPKGARVVYDAIVSVLKMGSRRDVEQRFLQNVHFE 296
Query: 290 DINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHP 349
D N W + L V + + YPRLD VS R+HLLK PFCVHP
Sbjct: 297 DGNILDWAYIIRALGDAAPSVTMGAQIL------LMYPRLDEHVSTRRDHLLKLPFCVHP 350
Query: 350 KTGRVCIPIDPKDCEEFDPT-TVPTLSELL 378
TG +C P++ ++ FDP P L ++L
Sbjct: 351 ATGSLCCPLEWEELTTFDPIDDPPKLQQML 380
>gi|56912227|ref|NP_001008768.1| DNA primase, p49 subunit [Rattus norvegicus]
gi|56789492|gb|AAH88272.1| DNA primase, p49 subunit [Rattus norvegicus]
Length = 296
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 30/295 (10%)
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
AD+C +CW LMT+A+++ID AL++DFGF H LWVYSGRRGVHCWVCD R+L++ R
Sbjct: 3 SADICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRS 62
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
I +Y + KG + KKV +HPF VR +++++FEE L+ Q++ +E ++K
Sbjct: 63 GIVEYLSLIKGGHDVKKKVHLNEKVHPF-VRKSINIIKKYFEEYALVDQDILENQENWDK 121
Query: 261 ILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE-- 318
IL+++P E+V EL+ +Q S RWE L+ + S Q + +C
Sbjct: 122 ILALVP-ETVHDELQKGFQRFHSSPQ--------RWEYLRK-VASAPQNTKN-DKCGPWL 170
Query: 319 --EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
EI+ + +PRLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP VPT+S
Sbjct: 171 EWEIMLQYCFPRLDINVSKGVNHLLKSPFSVHPKTGRISVPIDFQKVDQFDPFVVPTISA 230
Query: 377 LLRELNT------------GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCK 419
+ REL+ DSR V ++++TSL ++ F FL+ L KS K
Sbjct: 231 ICRELDVVSTTEKEKEENETDSRHRV-RDYKRTSLAPYVKVF-EQFLENLDKSRK 283
>gi|281207330|gb|EFA81513.1| DNA polymerase alpha primase subunit [Polysphondylium pallidum
PN500]
Length = 483
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 214/413 (51%), Gaps = 67/413 (16%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTL---DNDIYLRFQSFNSE 77
LK YY FP +++W+S+ + G YFGRREFS + D I LR +S
Sbjct: 68 LKKYYDEKFPWDLLYEWLSFNHFGDSSDGQSEYFGRREFSVSYTRPDKQIVLRNRSSPDV 127
Query: 78 SELENSIKEKCPS------------------------KIDIGPVYSVDPAKRHAYAQGGD 113
+ ++ I + P+ K+DIGPVY+ +P K+ +
Sbjct: 128 NNIKLLINDLLPATTVVGASGEVKRKTIGGSGRLVYDKLDIGPVYNSEPIKKDSVTS--- 184
Query: 114 NVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHIL 173
++PVEREL+FDIDI DYD+VR CC G +C +CW L+ +A + + + FGF+ L
Sbjct: 185 --YSPVERELVFDIDINDYDEVRACCKGQTLCSKCWGLLALAADYLTYQINECFGFEQFL 242
Query: 174 WVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSY 233
+V+SG RG+H W+ D A LT E R ++ + R+ ++ LHP +
Sbjct: 243 YVFSGGRGLHIWISDKSAVTLTYEMRKSLVSFLRMDHSSDY----------LHPQI---- 288
Query: 234 TEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSS-------N 286
E ++FEE ++ Q L S E++ ++ L P E GK + N R S N
Sbjct: 289 -EFFLKYFEEHMIEDQLLLSDEKQLKQFLEQFP------ESYGKKKINIRESVERVLEEN 341
Query: 287 SKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFC 346
S+ + +W +K +L + K+ + L+ + +V +T+PR+D V+ NHLLK+PFC
Sbjct: 342 SEVSSDVEKWMAIKASLATLKENI-DLQEIIFRVVMYYTHPRIDEPVTIGFNHLLKSPFC 400
Query: 347 VHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL------RELNTGDSRMDVDNE 393
+HP+T ++C+PI+ + +FDP VPTL+ +L N ++MD+D+E
Sbjct: 401 IHPRTKKLCVPIELSEIHKFDPNNVPTLNSILNINQDNNNNNNNSNQMDIDDE 453
>gi|71031526|ref|XP_765405.1| DNA primase small subunit [Theileria parva strain Muguga]
gi|68352361|gb|EAN33122.1| DNA primase small subunit, putative [Theileria parva]
Length = 386
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 183/328 (55%), Gaps = 32/328 (9%)
Query: 62 TLDNDIYLRFQSFNSESELENSIKEKC-----PSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
+L N IY +F S EN + C P K DIG +YS K GD F
Sbjct: 61 SLRNPIYASTTTFES---FENGFETLCNSDSVPFKFDIGAIYS---KKISLMQLSGD--F 112
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVY 176
PVERE++FDID+ DYD+ R CCS VC +CW + +A+++I L++DFGF ILWVY
Sbjct: 113 RPVEREIVFDIDMDDYDEFRTCCSEKKVCNKCWRYIKIAVELITKTLKEDFGFVDILWVY 172
Query: 177 SGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVS-FPGPLHPFLVRSYTE 235
SGRRG+HCWVCD AR+L E R +I +Y + ++ KKV+ + HP ++R++
Sbjct: 173 SGRRGIHCWVCDRAARQLPAEGRISIIEYLNLI--SDGFAKKVNLYAVDKHPLVLRAFHI 230
Query: 236 VLREFFEEKLLLSQNLFSTEERYEKILSMIPDE-SVTSELRGKWQENRRSSNSKED---- 290
R F LL QN F + + +L +P++ S + EN + S D
Sbjct: 231 CYRNF--NHLLSEQNFFYHKHHIKSLLDYVPEKYSNVRKSLNNCLENSQKRYSSVDFFNS 288
Query: 291 ----INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFC 346
+N R E ++SG G EIV AF+YPRLD+ V+K HLLK+PFC
Sbjct: 289 ICDMLNLVRPEDYIGKVESG--DFPGF---FMEIVIAFSYPRLDVNVTKDMGHLLKSPFC 343
Query: 347 VHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
VH KTGR+C+P+D ++ ++F+P +VPT+
Sbjct: 344 VHAKTGRICVPLDHENLDKFNPESVPTI 371
>gi|328872667|gb|EGG21034.1| DNA polymerase alpha primase subunit [Dictyostelium fasciculatum]
Length = 458
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 205/385 (53%), Gaps = 49/385 (12%)
Query: 22 KVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTL---------DNDIYLRFQ 72
+ Y +FP +++W++ + R + YF +REFS + + + + R +
Sbjct: 62 RAYLDTIFPWDILYEWLTASHSSRGED-EVVYFSKREFSVSSKGINYKTGKEQEFWNRHK 120
Query: 73 SFNSESELE-------NSIKEKC--PSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVEREL 123
SF + EL+ + +++K P K+DIG VY+ +P++ A+ + PV REL
Sbjct: 121 SFTNIEELKPFAMGRIDEVRQKADVPEKLDIGAVYNHEPSRMGAFMD-----YRPVCREL 175
Query: 124 IFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
+FDID DYD+VR CC G +C +CW L+ AI+++ LRD FGF+H + ++SG RGVH
Sbjct: 176 VFDIDSNDYDEVRTCCKGNTLCPKCWRLLAAAIRMLQVGLRDSFGFEHFMPIFSGGRGVH 235
Query: 184 CWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEE 243
WVCD A +T + R A+ YFR+ S++ P +HP + + F++
Sbjct: 236 LWVCDPNAMMMTEDMRRAVLGYFRL------SDQSPVSPDDMHPIAKDLFDNIFLPLFQD 289
Query: 244 KLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF--------- 294
LL Q + S +++ E I S++P T +++ + + + ++ IN
Sbjct: 290 HLLEDQQILSDDKQIEAIRSIMP---ATFKIKTGDAKKKVEFSPRDIINQILDKSSLTVQ 346
Query: 295 -RWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG- 352
+W+ + +T + +IV F+ PRLD V+ NHLLK+PFC+HP+T
Sbjct: 347 EKWKSIYDTFDKN-----SAFELIYKIVIHFSAPRLDEAVTVGVNHLLKSPFCIHPRTRI 401
Query: 353 RVCIPIDPKDCEEFDPTTVPTLSEL 377
R+C+PI K+ E F+P TVPTL +L
Sbjct: 402 RLCVPISLKEIETFNPDTVPTLEQL 426
>gi|407426843|gb|EKF39732.1| DNA primase small subunit, putative [Trypanosoma cruzi marinkellei]
Length = 451
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 190/389 (48%), Gaps = 42/389 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKS------------------------YFGR 56
L+ +Y ++P + +W+SY D + Y R
Sbjct: 46 LREFYEFVYPVELVTQWLSYDFSAAEKTADMTSAAPSPPVLEDVVKKEQRNIAAEGYLAR 105
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
REF FTL DI+ RF+S+++ +EL + P KID+G VY++ P ++ Q ++
Sbjct: 106 REFCFTLLGDIFSRFRSYSTSAELRRDLIRCFPEKIDVGAVYTIRPNQK----QSASSIL 161
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVY 176
P+EREL+FDID++DYD VR CCSG +C CW M A V+ L +DFGF HIL V+
Sbjct: 162 -PLERELVFDIDMSDYDSVRSCCSGKSICSYCWTWMACAAHVLRRILEEDFGFRHILPVF 220
Query: 177 SGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVS-FPG--PLHPFLVRSY 233
SGRRG+H WVCD +A +L +++R A+ Y V + V+ F P+HP + R
Sbjct: 221 SGRRGIHLWVCDRRACKLHDDERSALVGYLTVVVPKASRQVVVAEFVNGKPIHPTIRRVQ 280
Query: 234 TEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSK---ED 290
+V+ F L S + K S++ V + G ++ + + E+
Sbjct: 281 RDVIDPAFTRLFLESSESNPNSVLHPKGASVVYSAIVAALKMGSRRDVEQRFTQQVPFEE 340
Query: 291 INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
N W + L + V + + YPRLD V+ R+HLLK PFCVHP
Sbjct: 341 GNVLDWAYVIRALGDAAENVTAAAQIL------LMYPRLDEHVTTRRDHLLKLPFCVHPG 394
Query: 351 TGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
T +C P++ D F+P T P L E+L
Sbjct: 395 TASLCCPLEWDDVVSFNPLTDAPKLQEML 423
>gi|342181877|emb|CCC91356.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 417
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 200/398 (50%), Gaps = 47/398 (11%)
Query: 21 LKVYYGRLFPHADIFKWMSY---------------------------GNDGRH--PACDK 51
L+ +Y ++P + +W+SY N+G + + +
Sbjct: 7 LREFYEFVYPVDLVVQWLSYNLHDVSKANQAHAGDATSTLLQSTKEDANEGGYGSSSAAQ 66
Query: 52 SYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQG 111
Y RREF FTL DI+ RF+S+ S +EL + P KID+G VY++ P ++ Q
Sbjct: 67 GYLARREFCFTLLGDIFTRFRSYASAAELRRELIRCFPEKIDVGAVYNIRPNQKQ---QV 123
Query: 112 GDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDH 171
G+ V PVEREL+FDID++DYD+ R CC+G +C CW MT A V+ T L +DFGF +
Sbjct: 124 GNIV--PVERELVFDIDMSDYDNSRSCCTGKSICRWCWTWMTCAAGVLRTVLEEDFGFRY 181
Query: 172 ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVS--FPG-PLHPF 228
IL V+SGRRG+H WVCD KA ++ +++R A+ Y V + + V+ G P+HP
Sbjct: 182 ILPVFSGRRGIHIWVCDKKACKMHDDERTALVSYLTVVVPKTSRHAVVADFVSGRPIHPT 241
Query: 229 LVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQ--ENRRSSN 286
+ T+VL F L + + K ++ + V + G + E R N
Sbjct: 242 IQNIQTKVLDPAFTALFLDTSPDNPNRVTHPKGARVVYESIVAALKMGSRRDVEQRFLQN 301
Query: 287 SK-EDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPF 345
++ N W + +L V + + YPRLD VS R+HLLK PF
Sbjct: 302 VVFQEGNILDWSYVLRSLGDAATNVIAASQIL------LMYPRLDEHVSTRRDHLLKLPF 355
Query: 346 CVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELLRELN 382
CVHP TG +C P++ ++ FDP + P L ELL N
Sbjct: 356 CVHPATGSLCCPLEWENVFTFDPVSDPPKLQELLLNRN 393
>gi|389585468|dbj|GAB68199.1| DNA primase small subunit [Plasmodium cynomolgi strain B]
Length = 388
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 210/397 (52%), Gaps = 60/397 (15%)
Query: 50 DKSYFGRREFSFTLDND------IYLRFQSFNSESELENSIKEK-CPSKIDIGPVYSVDP 102
D +F +REFSFT + IY+R+ SFN+ E ++ + P K DIG VY+
Sbjct: 14 DPHFFAKREFSFTCKKNDQGKEEIYMRWLSFNNSEEFKDKLLSNFVPIKFDIGAVYNYPV 73
Query: 103 AKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTA 162
++ Q GD +F PV++ELIFDID+ DYDD+R CC+ +T+AI ++DTA
Sbjct: 74 YQKD---QKGD-IFHPVQKELIFDIDMNDYDDIRTCCNDK-------KFLTIAIVLLDTA 122
Query: 163 LRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFP 222
LR+DF +ILWVYSGRRG+HCWVCD R T + R A+ADY + G++ KKVS
Sbjct: 123 LREDFALQNILWVYSGRRGIHCWVCDESCRHYTTDARAALADYLNILSGSDTKKKKVSIW 182
Query: 223 GP-LHPFLVRSYTEVLREFFEEKLLLSQNLFST-EERYEKILSMIPDES------VTSEL 274
G +P + R++ E+ ++F E L+ Q+ F KI+ +P + V S
Sbjct: 183 GKEKYPMIERAF-EICYKYF-EILMEEQDFFKKGSPHVNKIIDYLPYATAKNVDPVKSAK 240
Query: 275 RGKWQENRRSSNSKEDINFFRWEQLKNTLQSG---KQKVQG----LRRCVEEIVFAFTYP 327
+++E ++N F + + L G K+K + ++E+VF FTYP
Sbjct: 241 INEFKEFIDNNNFNSKELFEKLSSIYGFLTPGNYFKKKDSNANLIIPSYIKELVFHFTYP 300
Query: 328 RLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSR 387
RLD+ VSK NHLLK+PFC+H T ELLRE
Sbjct: 301 RLDINVSKEINHLLKSPFCIHNGT------------------------ELLREQFDDPQN 336
Query: 388 MDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMES 424
VD E+ +TSL + +FR +FL+ +L SC ++ +S
Sbjct: 337 AHVDPEY-RTSLKLYVDYFRQNFLENILLSCADKRKS 372
>gi|407861596|gb|EKG07689.1| DNA primase small subunit, putative [Trypanosoma cruzi]
Length = 412
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 191/389 (49%), Gaps = 42/389 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSY------------GNDGRHPACD------------KSYFGR 56
L+ +Y ++P + +W+SY G P D + Y R
Sbjct: 7 LREFYEFVYPVELVTRWLSYDLSAAEKTTVITGAAPSPPVSDDVVKKEQRNIVAEGYLAR 66
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
REF FTL DI+ RF+S+++ +EL + P KID+G VY++ P ++ Q ++
Sbjct: 67 REFCFTLLGDIFSRFRSYSTSAELRRDLIRCFPEKIDVGAVYTIRPNQK----QSASSIL 122
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVY 176
P+EREL+FDID++DYD VR CCSG +C CW M A V+ L +DFGF +IL V+
Sbjct: 123 -PLERELVFDIDMSDYDSVRSCCSGKSICSYCWTWMACAAHVLRRILEEDFGFRYILPVF 181
Query: 177 SGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVS---FPGPLHPFLVRSY 233
SGRRG+H WVCD +A +L +++R AI Y V + V+ P+HP + R
Sbjct: 182 SGRRGIHLWVCDRRACKLHDDERSAIVGYLTVVVPKASRQIVVADFVNGKPIHPTIRRVQ 241
Query: 234 TEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSK---ED 290
+V+ F L S + K S++ V + G ++ + + E+
Sbjct: 242 RDVIDPAFTRLFLESSESNPNSVLHPKGASVVYSTIVAALKMGSRRDVEQRFTQQVPFEE 301
Query: 291 INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
N W + L + V + + YPRLD V+ R+HLLK PFCVHP
Sbjct: 302 GNVLDWAYVIRALGDAAENVTAAAQIL------LMYPRLDEHVTTRRDHLLKLPFCVHPG 355
Query: 351 TGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
T +C P++ D F+P T P L E+L
Sbjct: 356 TASLCCPLEWGDVVSFNPLTDAPKLQEML 384
>gi|71649883|ref|XP_813652.1| DNA primase small subunit [Trypanosoma cruzi strain CL Brener]
gi|70878555|gb|EAN91801.1| DNA primase small subunit, putative [Trypanosoma cruzi]
Length = 412
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 188/389 (48%), Gaps = 42/389 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACD------------------------KSYFGR 56
L+ +Y ++P + +W+SY D + Y R
Sbjct: 7 LREFYEFVYPVELVTQWLSYDFSAAEKTTDITGAAPSPPVSNDVVKKEQRNIVAEGYLAR 66
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
REF FTL DI+ RF+S+++ +EL + P KID+G VY++ P ++ Q ++
Sbjct: 67 REFCFTLLGDIFSRFRSYSTSAELRRDLIRYFPEKIDVGAVYTIRPNQK----QSASSIL 122
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVY 176
P+EREL+FDID++DYD VR CCSG +C CW M A V+ L +DFGF +IL V+
Sbjct: 123 -PLERELVFDIDMSDYDSVRSCCSGKSICSYCWTWMACAAHVLRRILEEDFGFRYILPVF 181
Query: 177 SGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVS---FPGPLHPFLVRSY 233
SGRRG+H WVCD +A +L +++R A+ Y V + V+ P+HP + R
Sbjct: 182 SGRRGIHLWVCDRRACKLHDDERSALVGYLTVVVPKASRQIVVADFVNGKPIHPTIRRVQ 241
Query: 234 TEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSK---ED 290
+V+ F L S + K ++ V + G ++ + + E+
Sbjct: 242 RDVIDPAFTRLFLESSESNPNSVLHPKGAGVVYSAIVAALKMGSRRDVEQRFTQQVPFEE 301
Query: 291 INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
N W + L + V + + YPRLD V+ R+HLLK PFCVHP
Sbjct: 302 GNVLDWAYVIRALGDAAENVTAAAQIL------LMYPRLDEHVTTRRDHLLKLPFCVHPG 355
Query: 351 TGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
T +C P++ D FDP T P L E+L
Sbjct: 356 TASLCCPLEWDDVVSFDPLTDAPKLQEML 384
>gi|330794619|ref|XP_003285375.1| hypothetical protein DICPUDRAFT_76324 [Dictyostelium purpureum]
gi|325084645|gb|EGC38068.1| hypothetical protein DICPUDRAFT_76324 [Dictyostelium purpureum]
Length = 420
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 209/387 (54%), Gaps = 54/387 (13%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACD-----KSYFGRREFS--------FTLDNDI 67
L+ +Y LFP + +W++ + D + F RREFS FT+ N
Sbjct: 22 LRKFYDELFPFTLLHEWLTINHTTTTNNQDFKEEVQKAFERREFSVRVIGEKVFTIRNKS 81
Query: 68 YLRFQSF-------NSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVE 120
+ + + N+ ++ + P ++DIGPVYS +P+K + PV
Sbjct: 82 FTKVEHLKEFLKGRNTTNQQTGATSIDLPIRLDIGPVYSWEPSKMSTVTD-----YYPVS 136
Query: 121 RELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
REL+FDIDI DY+D+R CCS +C +CW ++VA K +D LRD FGF+ I++V+SGRR
Sbjct: 137 RELVFDIDIDDYNDIRACCSNTGICHKCWGFLSVAAKFLDHYLRDCFGFEQIMFVFSGRR 196
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREF 240
G+HCWV D A L E R +I ++ R NE + ++ P L SY + F
Sbjct: 197 GLHCWVSDRSALFLQKENRQSIINHIR----NEITANQL-------PVLKYSYDKFFLPF 245
Query: 241 FEEKLLLSQNLFSTEERYEKILSMIP-----DESVTSEL---RGKWQENRRSSNSKEDIN 292
FE+ ++ Q LFS +++ + +LS+IP D+ + + L + K +E + + +E
Sbjct: 246 FEDHVVEEQELFSNQKQCDTLLSLIPIQIKRDKQIITPLENIKAKLEEIKNTVTDRE--- 302
Query: 293 FFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
W +K L+ LR + +IVF +T PR+D V+ NHLLKAPFC+HP T
Sbjct: 303 --IWFAIKKYLEDN-----NLREYLYQIVFTYTMPRIDEPVTIGMNHLLKAPFCIHPDTK 355
Query: 353 RVCIPIDPKDCEEFDPTTVPTLSELLR 379
++CIPI+ K+ ++FDP PTL +LL+
Sbjct: 356 KLCIPIELKNIDQFDPNQCPTLDQLLK 382
>gi|261329316|emb|CBH12297.1| DNA primase small subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 421
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 176/348 (50%), Gaps = 19/348 (5%)
Query: 38 MSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPV 97
++ G G + D Y RREF FTL DI+ RF+S++S +EL + P KID+G V
Sbjct: 58 VTEGGRGSTSSAD-GYLARREFCFTLLGDIFTRFRSYSSVTELRRELIRSFPEKIDVGAV 116
Query: 98 YSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIK 157
Y++ P ++ PVEREL+FDID++DYD+ R CC+G +C CW M+ A
Sbjct: 117 YNIRPNQKQKVG-----TIVPVERELVFDIDMSDYDNSRSCCTGKSICRWCWTWMSCAAA 171
Query: 158 VIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNK 217
V+ L DDFGF ++ V+SGRRG+H WVCD +A ++ +++R A+ Y V + +
Sbjct: 172 VLRKVLEDDFGFRYLFPVFSGRRGIHLWVCDKRACKMHDDERSALVSYLTVVVPKASQHA 231
Query: 218 KVS---FPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSEL 274
V+ P+HP + VL F L S + K ++ V++
Sbjct: 232 VVADFVNGKPIHPTIQHVQATVLDPSFTSLFLNSTPENPNRVTHPKGARIVYKAIVSALK 291
Query: 275 RGKWQ--ENRRSSNSK-EDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDM 331
G + E R N E+ N W + TL V + YPRLD
Sbjct: 292 MGTRRDVEQRFLRNVPFEEGNILDWTYVLRTLGDAATNV------IAAAQILLMYPRLDE 345
Query: 332 EVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
VS R+HLLK PFCVHP TG +C P++ + FDP + P L ++L
Sbjct: 346 HVSTRRDHLLKLPFCVHPATGSLCCPLEWDNVPTFDPVSDPPKLQDML 393
>gi|72391120|ref|XP_845854.1| DNA primase small subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175486|gb|AAX69626.1| DNA primase small subunit, putative [Trypanosoma brucei]
gi|70802390|gb|AAZ12295.1| DNA primase small subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 421
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 176/348 (50%), Gaps = 19/348 (5%)
Query: 38 MSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPV 97
++ G G + D Y RREF FTL DI+ RF+S++S +EL + P KID+G V
Sbjct: 58 VTEGGRGSTSSAD-GYLARREFCFTLLGDIFTRFRSYSSVTELRRELIRSFPEKIDVGAV 116
Query: 98 YSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIK 157
Y++ P ++ PVEREL+FDID++DYD+ R CC+G +C CW M+ A
Sbjct: 117 YNIRPNQKQKVG-----TIVPVERELVFDIDMSDYDNSRSCCTGKSICRWCWTWMSCAAA 171
Query: 158 VIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNK 217
V+ L DDFGF ++ V+SGRRG+H WVCD +A ++ +++R A+ Y V + +
Sbjct: 172 VLRKVLEDDFGFRYLFPVFSGRRGIHLWVCDKRACKMHDDERSALVSYLTVVVPKASQHA 231
Query: 218 KVS---FPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSEL 274
V+ P+HP + VL F L S + K ++ V++
Sbjct: 232 VVADFVNGKPIHPTIQHVQATVLDPAFTSLFLNSTPENPNRVTHPKGARIVYKAIVSALK 291
Query: 275 RGKWQ--ENRRSSNSK-EDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDM 331
G + E R N E+ N W + TL V + YPRLD
Sbjct: 292 MGTRRDVEQRFLRNVPFEEGNILDWTYVLRTLGDAATNV------IAAAQILLMYPRLDE 345
Query: 332 EVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELL 378
VS R+HLLK PFCVHP TG +C P++ + FDP + P L ++L
Sbjct: 346 HVSTRRDHLLKLPFCVHPATGSLCCPLEWDNVPTFDPVSDPPKLQDML 393
>gi|239791371|dbj|BAH72160.1| ACYPI008656 [Acyrthosiphon pisum]
Length = 183
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 126/185 (68%), Gaps = 11/185 (5%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+YL VYY +LFP++ KW+SYGN F REFSFTL DIY+R+QSFN+
Sbjct: 7 PDYLNVYYKKLFPYSQFHKWLSYGN------VKPENFLNREFSFTLHEDIYIRYQSFNTL 60
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
E E I+ +CP KIDIG V+++ P Y Q F +E+EL+ DID+TDYD VR
Sbjct: 61 QEFETEIQNRCPFKIDIGAVFNMSPKVCRNYPQ-----FHALEKELVIDIDMTDYDQVRT 115
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CCSGA+VC +CW M +A+K+++ A+RDDFG+ H+LWV+SGRRG+HCW+CD AR+L
Sbjct: 116 CCSGAEVCQKCWRFMVIAVKILERAIRDDFGWKHLLWVFSGRRGIHCWICDESARKLLPS 175
Query: 198 QRGAI 202
G +
Sbjct: 176 DVGRL 180
>gi|405977813|gb|EKC42247.1| Uncharacterized protein C4orf14-like protein [Crassostrea gigas]
Length = 820
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 147/246 (59%), Gaps = 41/246 (16%)
Query: 165 DDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSF-PG 223
+DFGF+H LWVYSGRRGVHCWVCD AR+L+ R A+A+Y + KG EN NKK+S
Sbjct: 4 EDFGFEHRLWVYSGRRGVHCWVCDETARKLSQNGRTAVAEYLSLVKGGENQNKKISLDTS 63
Query: 224 PLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRR 283
LHPF+ S E+++ F+E + Q+ EE+ +K+LS+I DE++
Sbjct: 64 TLHPFISHSL-EIVKARFDEYAVKKQDFLGDEEKQKKVLSLITDENILY----------- 111
Query: 284 SSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKA 343
K +G + +EEI+ + YPRLD+ VSK NHLLK+
Sbjct: 112 ------------------------NKSKGGKYVLEEIMLQYCYPRLDVNVSKGVNHLLKS 147
Query: 344 PFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVD---NEWEKTSLG 400
PFCVHPKTGRVC+PIDPK +EFDP VPT+SE+L ELN+ + + D + E+ KTSL
Sbjct: 148 PFCVHPKTGRVCVPIDPKKIDEFDPMAVPTISEILEELNSVE-KEDANKKTKEFNKTSLK 206
Query: 401 KSIRFF 406
+ + F
Sbjct: 207 ECTQVF 212
>gi|449018240|dbj|BAM81642.1| DNA primase, small subunit [Cyanidioschyzon merolae strain 10D]
Length = 442
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 194/403 (48%), Gaps = 49/403 (12%)
Query: 11 VIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDN----D 66
+P L+ YY FP + +W++ GR A + RREFS D+ +
Sbjct: 39 ALPALSRAESLQRYYAEWFPATVLAQWLA----GRPGAEGEDLLSRREFSCEADDGSGGE 94
Query: 67 IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFD 126
+R+ ++ + L P + DIGPVY P R+ N PVEREL+FD
Sbjct: 95 KRIRYLAYQDAAGLRAEFLRLLPLRYDIGPVYDASPRDRYRRI----NKLEPVERELVFD 150
Query: 127 IDITDYDDVRYCC----SGADV---------CLECWPLMTVAIKVIDTALRDDFGFDHIL 173
+D+ Y+ V +GA C + W + A+ V++ ALR+DFG++H+L
Sbjct: 151 VDLDVYESVSALGQSEPAGAAANFADDPLRACADNWLFVEAAVTVMEQALREDFGYEHVL 210
Query: 174 WVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP--------L 225
WV+SGRRGVH WVCD +AR+LT+E R AI +Y + Y+G + + S L
Sbjct: 211 WVFSGRRGVHAWVCDTRARQLTDEARAAIVEYLQ-YRGISAVSNRSSLSSTFNRTATTFL 269
Query: 226 HPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSS 285
HP L R+ T +L F + L ++++ E + +L M PD V LR Q S
Sbjct: 270 HPALRRAAT-ILLPFMDRFLEERPSIWADEGAMDTVLGMCPDAQVRETLRRFIQR----S 324
Query: 286 NSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPF 345
+++E W L S + IV YPRLD+ V++ RNHLLK PF
Sbjct: 325 HTRESAAAV-WRLALEQLDSKRLDTDA----AMHIVLGLLYPRLDVNVTRQRNHLLKGPF 379
Query: 346 CVHPKTGRVCIPIDPKDCEEFDPTT-VPTLSELLRELNTGDSR 387
+HPKT +C+P +F P VP L L+ TGD++
Sbjct: 380 SIHPKTNAICVPFRADQVSKFRPERDVPRLVPLV----TGDAK 418
>gi|399216400|emb|CCF73088.1| unnamed protein product [Babesia microti strain RI]
Length = 364
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 196/376 (52%), Gaps = 45/376 (11%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKS---YFGRREFSFTL-------DNDIYLR 70
L+ YY LFP +I+KW++Y ND P D + + RRE SF D+DI+ R
Sbjct: 15 LRFYYQNLFPLPEIYKWLTYRNDPNQPTSDSNDPQFCLRREMSFVYKRQDHSDDSDIFTR 74
Query: 71 FQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDIT 130
+ +++G VY++ ++ + F +REL+FDIDI
Sbjct: 75 WIPL-----------------VNLGAVYNLAISQ----MSINNKKFTQEQRELVFDIDIN 113
Query: 131 DYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGK 190
DYDD+R CC ++C +CW M++ ++ + L DF F+++L+V+SGRRG+HCWVCD
Sbjct: 114 DYDDIRTCCKEKNICDKCWRYMSIGVRFLYETLTVDFSFNNLLFVFSGRRGIHCWVCDTG 173
Query: 191 ARRLTNEQRGAIADYFRVYKGNENSNKKVS-FPGPLHPFLVRSYTEVLREFFEEKLLLSQ 249
ARRL E R AI +Y + G E K+V+ + HP + R++ EF LL+ Q
Sbjct: 174 ARRLPQEARLAIVEYLTLVTGAEVIKKRVNLYTKDSHPLVARAFHYCYMEF--HSLLIEQ 231
Query: 250 NLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL--------KN 301
N F + + +L IPD +ELR R NS ++ QL +
Sbjct: 232 NYFIDKHHHSVLLEYIPDVQKFAELRASIS---RPFNSSVELFNVMCNQLGIPNPIEYRE 288
Query: 302 TLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK 361
+ KV + +EI+ +++ RLD V+K HLLK+PFC+H TG+VC+PID
Sbjct: 289 NINKSHLKVHSIPGFFKEIIIHYSFIRLDCNVTKDMGHLLKSPFCIHIGTGKVCVPIDIS 348
Query: 362 DCEEFDPTTVPTLSEL 377
E+F+P +VPT+ +
Sbjct: 349 AIEKFNPQSVPTICKF 364
>gi|313218612|emb|CBY43098.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 166/287 (57%), Gaps = 23/287 (8%)
Query: 92 IDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPL 151
IDIG +Y+ R + F +REL+FDIDI+DYDDVR CC A +C +CWPL
Sbjct: 7 IDIGAIYNYSCKHRLSPD------FKEEQRELVFDIDISDYDDVRTCCQEARICQKCWPL 60
Query: 152 MTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKG 211
M++ +KV++ L+ FGF+ IL+V+SGRRG+HCWV D +AR+L +R A+A Y +V
Sbjct: 61 MSICVKVLEETLKTAFGFEQILFVFSGRRGIHCWVFDEEARKLNGAERFALAHYCQV--- 117
Query: 212 NENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIP-DESV 270
+ +++ LH + + + + + ++ L +Q+L TEE + L + D+S+
Sbjct: 118 ---TAQQIGTSHRLHTHIQNALK--ITDLYWDEYLETQDLLGTEEGIDSFLKYVKLDDSI 172
Query: 271 TSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLD 330
+E W+E K D RW + + + K R +E I A TYPR+D
Sbjct: 173 KNE----WKEQML----KYDTTMERWSIFQQKRKEAQSKKYRDRLFIERIKIAVTYPRID 224
Query: 331 MEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
++V++ NHLLKAPF VHPKTG+VC+P + D + FD VPT+ L
Sbjct: 225 IKVTEGFNHLLKAPFSVHPKTGKVCVPFNADDVDSFDCDNVPTVFSL 271
>gi|242003560|ref|XP_002422773.1| DNA primase small subunit, putative [Pediculus humanus corporis]
gi|212505631|gb|EEB10035.1| DNA primase small subunit, putative [Pediculus humanus corporis]
Length = 233
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 135/200 (67%), Gaps = 9/200 (4%)
Query: 80 LENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCC 139
+E +IK+K P KIDIG ++S H + Q ++ PV REL+FDID+TDYDDVR CC
Sbjct: 1 MEEAIKKKVPFKIDIGAIFSF-----HRHRQVASSL-VPVARELVFDIDLTDYDDVRNCC 54
Query: 140 SGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQR 199
GAD+CL+CW M +A K+ID ALR+DFGF ++LWV+SGRRG+HCWVCD A+ L++++R
Sbjct: 55 QGADICLKCWKFMAIACKIIDLALREDFGFQNLLWVFSGRRGIHCWVCDVSAKILSSQER 114
Query: 200 GAIADYFRVYKGNENSNKKVSFP--GPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
A+ADY ++ G+ N KKV+ P LHP +R + ++R F E + QNL E
Sbjct: 115 SAVADYLQLISGSSNCAKKVNLPISDKLHPS-IRRASNIIRNKFFEVCIEGQNLLEKPES 173
Query: 258 YEKILSMIPDESVTSELRGK 277
+K+LS+I DE + + + K
Sbjct: 174 LKKLLSLIWDEKLKNRISKK 193
>gi|123398916|ref|XP_001301371.1| DNA primase, eukaryotic-type, small subunit family protein
[Trichomonas vaginalis G3]
gi|121882544|gb|EAX88441.1| DNA primase, eukaryotic-type, small subunit, putative family
protein [Trichomonas vaginalis G3]
Length = 362
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 186/359 (51%), Gaps = 30/359 (8%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L+ YY FP DI +W+SYG G P RE F D++ ++R+Q+ + L
Sbjct: 9 LRKYYSDKFPLEDIKQWISYG--GNEP------LENRECGFFFDDEKFMRWQTVDVLRRL 60
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
+ P +++IGPVY+ A R + G F P +ELIFD+D D+ D++ CC
Sbjct: 61 ALA---NPPQRMEIGPVYTHPIAIRQQQSPGE---FRPKSKELIFDLDADDFKDIKCCCG 114
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
+++C +CWP M AI + T LR +FGF I V+SGRRG+H WVCD KAR L+ R
Sbjct: 115 DSEICEKCWPYMHCAIDCLTTILRTNFGFKKIFPVFSGRRGIHIWVCDKKARELSAAVRD 174
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEK 260
I Y + + E N F P L + + F K+ +QN+F ++ E+
Sbjct: 175 KIVHYLNLKEITEMDN----FLLNASPLLKQMLPSCEKYFC--KIYRTQNIFKNQKTSER 228
Query: 261 ILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEI 320
++ E++ ++ + +S + RWE +K GK + + + +
Sbjct: 229 AYKLLGSETI--------KQINKIIDSTHGTDEERWESVKTMAFKGKTFAESDQ--YKRL 278
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLR 379
+ +++PRLD V+K NHLLK+PF VHPK+G + +PI P+ E T VP+ +L++
Sbjct: 279 IVFYSFPRLDENVTKGMNHLLKSPFSVHPKSGFISVPIPPEKYELLPQTWVPSFEKLMK 337
>gi|167394575|ref|XP_001741017.1| DNA primase small subunit [Entamoeba dispar SAW760]
gi|165894599|gb|EDR22538.1| DNA primase small subunit, putative [Entamoeba dispar SAW760]
Length = 352
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/360 (35%), Positives = 186/360 (51%), Gaps = 45/360 (12%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L +YY + FP ++W++ DG+ Y RE + + + R+ FNS EL
Sbjct: 8 LCLYYQKFFPSKLFYQWIT--RDGK-------YSQTRELAAFKTDSFFNRYLHFNSSYEL 58
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
N + P +I+IGP++ + A+ RE + DIDI DYDDVRYCCS
Sbjct: 59 SNYLIRYVPERIEIGPIFDHLLFNKINTAKM---------REFVIDIDIDDYDDVRYCCS 109
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
VC +CW LM+ A KVI ++ FG HIL V+SGRRG+H W+CD +A + R
Sbjct: 110 STQVCEKCWVLMSCAAKVIHHIFKEQFGMKHILNVFSGRRGIHFWICDEQALNFNEQMRT 169
Query: 201 AIADYFRVYKGNENSNKKVSFPGPLH---PFLVRSYTEVLREFFEEKLLLSQNLFSTEER 257
I YF ++ N+ +NK +H P Y ++L +FE+ Q +F TE+R
Sbjct: 170 YITKYFNLF-TNQCTNKDNHPIIDIHEEYPLYDEVY-QILEPYFED-YCEKQEIFKTEQR 226
Query: 258 YEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCV 317
E++L ++P + S++ GK ++ W LK ++ K +
Sbjct: 227 KEQLLKLLPQNEI-SQVTGK-------------LDNLSWIILKEHFKNNK-------LIL 265
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
IVF + YPR+D+ VS NHLLKAPFC+HP T +VC+PI+ + FDP VPTL L
Sbjct: 266 ISIVFTYLYPRIDINVSVQLNHLLKAPFCIHPSTNKVCVPINFNTIDSFDPNKVPTLQSL 325
>gi|119617368|gb|EAW96962.1| hCG2016482, isoform CRA_c [Homo sapiens]
Length = 278
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 164/273 (60%), Gaps = 27/273 (9%)
Query: 166 DFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPL 225
DFGF H LWVYSGRRGVHCWVCD R+L++ R I +Y + KG ++ KKV +
Sbjct: 7 DFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRSGIVEYLSLVKGGQDVKKKVHLSEKI 66
Query: 226 HPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSS 285
HPF +R +++++FEE L++Q++ +E ++KIL+++P E++ EL+ +Q +S
Sbjct: 67 HPF-IRKSINIIKKYFEEYALVNQDILENKESWDKILALVP-ETIHDELQQSFQ---KSH 121
Query: 286 NSKEDINFFRWEQLKNTLQSGKQKVQGLRR---CVEEIVFAFTYPRLDMEVSKHRNHLLK 342
NS + RWE LK + ++ + EI+ + +PRLD+ VSK NHLLK
Sbjct: 122 NSLQ-----RWEHLKKVASRYQNNIKNDKYGPWLEWEIMLQYCFPRLDINVSKGINHLLK 176
Query: 343 APFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRM----------DVDN 392
+PF VHPKTGR+ +PID + ++FDP TVPT+S + REL+ + DV +
Sbjct: 177 SPFSVHPKTGRISVPIDLQKVDQFDPFTVPTISFICRELDAISTNEEEKEENEAESDVKH 236
Query: 393 ---EWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
+++KTSL ++ F FL+ L KS K E+
Sbjct: 237 RTRDYKKTSLAPYVKVF-EHFLENLDKSRKGEL 268
>gi|387593558|gb|EIJ88582.1| hypothetical protein NEQG_01272 [Nematocida parisii ERTm3]
Length = 284
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 175/361 (48%), Gaps = 104/361 (28%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
N L++YY LFP DI +W+ Y REFSFTL N+IY+R+ + N+
Sbjct: 8 NLLRIYYQSLFPVYDIMRWLRY-------------VKTREFSFTLMNEIYIRYITVNTAE 54
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
EL + P K+DIG VY PA A DN A + +EL+FDID+TDY R C
Sbjct: 55 ELGIRLVTDTPQKLDIGGVYVHKPA-----AVTSDN--ACMIKELVFDIDLTDYS--RKC 105
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C+ D+C C+PL+ A++V++ L++ FGF HIL+V+SG RGVHCWV D A L+++
Sbjct: 106 CTDKDMCELCFPLIKCAVEVLENILKNVFGFKHILFVFSGGRGVHCWVSDAVALTLSDKD 165
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R + +Y NS +K + PG EE L ++Y
Sbjct: 166 RVNVTEYI-------NSIQKRAHPG-----------------IEEIL----------KKY 191
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
I+SM D S+T
Sbjct: 192 RDIMSMDKDTSITD---------------------------------------------- 205
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
+++ +P+LD+ V+K HLLK+PFC+HP++GRVCIPID + ++ +VPT ++
Sbjct: 206 --LYSELFPKLDVNVTKQTKHLLKSPFCIHPRSGRVCIPIDITEIDKLSLESVPTAESVV 263
Query: 379 R 379
R
Sbjct: 264 R 264
>gi|387597212|gb|EIJ94832.1| hypothetical protein NEPG_00356 [Nematocida parisii ERTm1]
Length = 284
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 175/361 (48%), Gaps = 104/361 (28%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
N L++YY LFP DI +W+ Y REFSFTL N+IY+R+ + N+
Sbjct: 8 NLLRIYYQSLFPVYDIMRWLRY-------------VKTREFSFTLMNEIYIRYITVNTAE 54
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
EL + P K+DIG VY PA A +N A + +EL+FDID+TDY R C
Sbjct: 55 ELGIRLVTDTPQKLDIGGVYVHKPA-----AVTSNN--ACMIKELVFDIDLTDYS--RKC 105
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C+ D+C C+PL+ A++V++ L++ FGF HIL+V+SG RGVHCWV D A L+++
Sbjct: 106 CTDKDMCELCFPLIKCAVEVLENILKNVFGFKHILFVFSGGRGVHCWVSDAVALTLSDKD 165
Query: 199 RGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
R + +Y NS +K + PG EE L ++Y
Sbjct: 166 RVNVTEYI-------NSIQKRAHPG-----------------IEEIL----------KKY 191
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
I+SM D S+T
Sbjct: 192 RDIMSMDKDTSITD---------------------------------------------- 205
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
+++ +P+LD+ V+K HLLK+PFC+HP++GRVCIPID + ++ +VPT ++
Sbjct: 206 --LYSELFPKLDVNVTKQTKHLLKSPFCIHPRSGRVCIPIDITEIDKLSLESVPTAESVV 263
Query: 379 R 379
R
Sbjct: 264 R 264
>gi|67483744|ref|XP_657092.1| DNA primase small subunit [Entamoeba histolytica HM-1:IMSS]
gi|56474331|gb|EAL51706.1| DNA primase small subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705258|gb|EMD45341.1| DNA primase small subunit, putative [Entamoeba histolytica KU27]
Length = 372
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 182/374 (48%), Gaps = 57/374 (15%)
Query: 7 KQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDND 66
KQ N++ + F FP ++W++ +G+ Y RE + N
Sbjct: 26 KQTNIVVEKF------------FPSKLFYQWVT--RNGK-------YSQTRELAAFKTNS 64
Query: 67 IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFD 126
+ R+ FNS +L N + P +I+IGP++ H + RE + D
Sbjct: 65 FFNRYLHFNSSYDLSNYLSRYVPERIEIGPIFD------HLLFNKTN---TATMREFVID 115
Query: 127 IDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
IDI DYDD+RYCCS VC +CW LM+ A KVI ++ FG HIL V+SGRRG+H W+
Sbjct: 116 IDIDDYDDIRYCCSSTQVCKKCWILMSCAAKVIHHIFQEQFGMKHILNVFSGRRGIHFWI 175
Query: 187 CDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLH---PFLVRSYTEVLREFFEE 243
CD +A + R I YF ++ N+ +NK +H P Y ++L +FE+
Sbjct: 176 CDEQALHFNEQMRTYITKYFSLF-TNQCTNKDNHPIIDIHEEYPLYNEVY-QILEPYFED 233
Query: 244 KLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTL 303
Q +F E+R E++L+++P + +R N W LK
Sbjct: 234 -YCEKQEIFKIEQRKEQLLNLLPQNETSQVIRK--------------FNNLSWTLLKEHF 278
Query: 304 QSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDC 363
++ K + IVF + YPR+D VS NHLLKAPFC+HP T +VCIPI+
Sbjct: 279 KNNKTTLMS-------IVFTYLYPRIDTNVSVQLNHLLKAPFCIHPSTNKVCIPINFNTI 331
Query: 364 EEFDPTTVPTLSEL 377
+ FDP VPTL L
Sbjct: 332 DSFDPNKVPTLQSL 345
>gi|290977316|ref|XP_002671384.1| predicted protein [Naegleria gruberi]
gi|284084952|gb|EFC38640.1| predicted protein [Naegleria gruberi]
Length = 358
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 181/321 (56%), Gaps = 21/321 (6%)
Query: 67 IYLRFQSFNSESELENSIKE--KCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELI 124
I+ R++S + ++L+ + + P K+DIGPVY++ AK++ V PVE+E
Sbjct: 18 IFSRYKSIKNATDLKEQVTKYSNVPVKLDIGPVYNLPVAKKNQ----NQTVLIPVEKEYC 73
Query: 125 FDIDITDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVH 183
DIDI+DYDDVR+C C+G C +CW LM A++++D L D FG H++WVYSGRRG+H
Sbjct: 74 IDIDISDYDDVRFCGCTGGKYCKQCWRLMNCAMEILDHLLVDVFGTKHLIWVYSGRRGIH 133
Query: 184 CWVCDGKARRLTNEQRGAIADYFRVYK----GNENSNKKVSFPGPLHP-FLVRSYT-EVL 237
CW D +++ NE R +I+ + +Y+ E +++V+ G HP F + S
Sbjct: 134 CWASDELLKKMNNEGRSSISRFIHIYQSSSIAGEKQSRRVNLTGNAHPSFDIDSIVFTTC 193
Query: 238 REFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWE 297
++F E + +F E ++ + + + SE++ QE S S DI +
Sbjct: 194 EKYFIEIFINDMGIFDDELIMQQSIPYLLNLIYISEVKTMIQEILESGKSGTDI----YS 249
Query: 298 QLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIP 357
Q+++ L K+ + + EIV++F YPRLD+ VSK NHLLK+PFCVHP TG +C+P
Sbjct: 250 QIRDKLLRDKKN----KHFLWEIVYSFVYPRLDVNVSKGFNHLLKSPFCVHPDTGNICVP 305
Query: 358 IDPKDCEEFDPTTVPTLSELL 378
I + + T L +LL
Sbjct: 306 IKHQHYNFYPDTHGARLHDLL 326
>gi|57207862|dbj|BAD86530.1| DNA primase [Coprinopsis cinerea]
Length = 243
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 149/254 (58%), Gaps = 29/254 (11%)
Query: 120 ERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGR 179
++EL+FDID+TDYD VR CCS A +C CW ++ A+KV+D ++R+ FG++ +LWVYSGR
Sbjct: 1 QKELVFDIDLTDYDLVRTCCSDAAICKRCWTFISAAVKVLDRSIREHFGYEKLLWVYSGR 60
Query: 180 RGVHCWVCDGKARRLTNEQRGAIADYFRVYK-GNENSNKKVS-------FPGPLHPFLVR 231
RG+H W+ D +A L++ QR AI + V G+ ++KK++ P PL L
Sbjct: 61 RGIHLWISDVEAMELSDAQRKAIVGWMNVVNVGSRETSKKLNVRTASKVLPPPLQDAL-- 118
Query: 232 SYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN-RRSSNSKED 290
E L F + +L Q+ F++E +E +L +P V LR KW + RSS+ K
Sbjct: 119 ---EELVPIFSDLILGDQDCFASENGWETLLEFVPIPQVAERLRRKWSNDPDRSSDEK-- 173
Query: 291 INFFRWEQLKNTL----QSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFC 346
W LK ++ Q+ Q L +E+I+ +TYPR+D EVSKHRNHLLK+PFC
Sbjct: 174 -----WADLKAEAREFDKNSPQRTQ-LMHAMEDIILHYTYPRIDAEVSKHRNHLLKSPFC 227
Query: 347 VHPKTGRVCIPIDP 360
+ + C P DP
Sbjct: 228 IQSNS---CSPGDP 238
>gi|294875162|ref|XP_002767220.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239868737|gb|EEQ99937.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 314
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 123/191 (64%), Gaps = 6/191 (3%)
Query: 52 SYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQG 111
+ RREFSFTL DIY R+ SF+ + + ++ ++ P KIDIG V+++ P + G
Sbjct: 1 GFLFRREFSFTLPGDIYCRYLSFHGQHDFRKALLDRVPDKIDIGAVFNIPPTHYQQFGGG 60
Query: 112 GDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDH 171
F P +REL+FDID+ DYD+VR CC G+ +C CW + A+++++ ALRDDFGF H
Sbjct: 61 ----FQPQQRELVFDIDMDDYDEVRNCCKGSSICKLCWTFIACAVRILNRALRDDFGFKH 116
Query: 172 ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKV-SFPGPLHPFLV 230
IL+ +SGRRGVHCWVCD AR+L+NEQR A+A+Y ++ G K + S HP V
Sbjct: 117 ILFAFSGRRGVHCWVCDETARKLSNEQRSAVAEYLQLLNGGRYGCKHIRSSAQQRHPH-V 175
Query: 231 RSYTEVLREFF 241
R ++ R++
Sbjct: 176 RRGIDICRKYL 186
>gi|71991583|ref|NP_497283.2| Protein T24C4.5 [Caenorhabditis elegans]
gi|351062076|emb|CCD69959.1| Protein T24C4.5 [Caenorhabditis elegans]
Length = 318
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 115/195 (58%), Gaps = 11/195 (5%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P L +YY FP KW+ YG + YF RREF+F L +D+++R++S+N E
Sbjct: 9 PQDLPIYYKNFFPVKPFTKWLCYGQNY------GDYFNRREFTFILADDVHIRYRSYNDE 62
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
++ P K+DIG VY+ +P Y + VEREL+FDID+TDYD VR
Sbjct: 63 HSFVKALSSTNPEKLDIGAVYNHEPINNKRYTD-----YQAVERELVFDIDLTDYDPVRN 117
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
CC A VC +CW M +A++++D L + F F +WV+SGRRGVHCWV D KAR L N
Sbjct: 118 CCKDATVCPKCWKFMVLAVRILDFQLEEMFNFKARMWVFSGRRGVHCWVGDKKARMLNNN 177
Query: 198 QRGAIADYFRVYKGN 212
QR AIA ++K N
Sbjct: 178 QRSAIATRLNLFKKN 192
>gi|361131039|gb|EHL02769.1| putative DNA primase small subunit [Glarea lozoyensis 74030]
Length = 237
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 144/273 (52%), Gaps = 63/273 (23%)
Query: 154 VAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNE 213
++IKVID ALRDDFGF HILWVYSGRRG H WV
Sbjct: 1 MSIKVIDVALRDDFGFKHILWVYSGRRGAHAWV--------------------------- 33
Query: 214 NSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSE 273
RS E+L+ F+ +L Q+ + T+ +YE++L ++PD ++
Sbjct: 34 -----------------RSL-EILKTHFQSDILQDQDPWETDAKYERLLELLPDRTLNDA 75
Query: 274 LRGKWQENR-RSSNSKEDINFFRWEQLKNTLQSGKQK---VQGLRRCVEEIVFAFTYPRL 329
LR KW + R+S +K W + +SG K + L ++I+ +TYPRL
Sbjct: 76 LRKKWSSSPGRASTAK-------WADIDALAKSGTSKNLDSKALLEAKQDILLEYTYPRL 128
Query: 330 DMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMD 389
D+EVSKH NHLLK+PF VHP TGRVC+PI+PK EFDP VPT++ELL +++ +
Sbjct: 129 DIEVSKHLNHLLKSPFVVHPGTGRVCVPINPKKLREFDPLDVPTVTELLTDIDEWLPPAE 188
Query: 390 VDNE------WEKTSLGKSIRFFRSSFLQPLLK 416
+E WEKT L I FR F+ L+K
Sbjct: 189 DKSEGKPVADWEKTRLKPYIEHFR-LFVATLMK 220
>gi|402579843|gb|EJW73794.1| DNA primase, partial [Wuchereria bancrofti]
Length = 181
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 116/186 (62%), Gaps = 11/186 (5%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L YY RLFP + KW++YG D ++ F RE +F ++D + R++SF ++
Sbjct: 3 LPEYYRRLFPFEPLCKWLAYGEDL------QASFQMRELAFVFEDDRHARYRSFEDSADF 56
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
E + + P KIDIG VY+ P +A F PVERELIFDID+TDYDD+R CCS
Sbjct: 57 ERELCKANPQKIDIGAVYNYKPKDHKKFAD-----FHPVERELIFDIDLTDYDDIRTCCS 111
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
A VC +CW +++A+ V++ L+ FGF H LWV+SGRRG+HCWV D AR+L N R
Sbjct: 112 KAKVCRKCWRWISIAVGVLNYLLQRHFGFKHCLWVFSGRRGIHCWVADAAARKLQNAGRM 171
Query: 201 AIADYF 206
A+ +Y
Sbjct: 172 AVVEYL 177
>gi|19920257|gb|AAM08673.1|AC116971_7 TC3_70K14.7 [Trypanosoma cruzi]
Length = 394
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 172/361 (47%), Gaps = 42/361 (11%)
Query: 21 LKVYYGRLFPHADIFKWMSY------------GNDGRHPACD------------KSYFGR 56
L+ +Y ++P + +W+SY G P D + Y R
Sbjct: 45 LREFYEFVYPVELVTQWLSYDFSAAEKTTDITGAAPSPPVSDDVVKKEQRNIVAEGYLAR 104
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
REF FTL DI+ RF+S+++ +EL + P KID+G VY++ P ++ Q ++
Sbjct: 105 REFCFTLLGDIFSRFRSYSTSAELRRDLIRCFPEKIDVGAVYTIRPNQK----QSASSIL 160
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVY 176
P+EREL+FDID++DYD VR CCSG +C CW M A V+ L +DFGF +IL V+
Sbjct: 161 -PLERELVFDIDMSDYDSVRSCCSGKSICSYCWTWMACAAHVLRRILEEDFGFRYILPVF 219
Query: 177 SGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVS---FPGPLHPFLVRSY 233
SGRRG+H WVCD +A +L +++R A+ Y V + V+ P+HP + R
Sbjct: 220 SGRRGIHLWVCDRRACKLHDDERSALVGYLTVVVPKASRQIVVADFVNGKPIHPTIRRVQ 279
Query: 234 TEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSK---ED 290
+V+ F L S + K ++ V + G ++ + + E+
Sbjct: 280 RDVIDPAFTRLFLESSESNPNSVLHPKGAGVVYSAIVAALKMGSRRDVEQRFTQQVPFEE 339
Query: 291 INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPF-CVHP 349
N W + L + V + + YPRLD V+ R+HLLK + V P
Sbjct: 340 GNVLDWAYVIRALGDAAENVTAAAQIL------LMYPRLDEHVTTRRDHLLKLEYSIVSP 393
Query: 350 K 350
K
Sbjct: 394 K 394
>gi|340507513|gb|EGR33459.1| hypothetical protein IMG5_052000 [Ichthyophthirius multifiliis]
Length = 353
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 116/198 (58%), Gaps = 15/198 (7%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
N L+ YY + FP + W+ Y + YF +REFSFT D+Y R+ FNS+
Sbjct: 27 NSLQEYYQQNFPINQFYDWLCYSES-------QEYFQKREFSFTFPGDVYWRYIFFNSKE 79
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
L ++ EK P KIDIG V++ Q GD +E+E + DID+TDYD++R C
Sbjct: 80 HLLQTLIEKVPEKIDIGAVFN-------KQGQKGDMNLKAIEKEFVIDIDMTDYDNIRTC 132
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C+GA++C +CW M A ++I L +DF F H+LWVYSGRRG+H W+CD R+ +++
Sbjct: 133 CTGANICEKCWKFMKYACELISKTL-EDFDFKHVLWVYSGRRGIHAWICDSNVRKSSDKI 191
Query: 199 RGAIADYFRVYKGNENSN 216
R I ++ + N+ S+
Sbjct: 192 RSCIIEHMNLIIDNDKSD 209
>gi|47182664|emb|CAG14143.1| unnamed protein product [Tetraodon nigroviridis]
Length = 145
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 104/147 (70%), Gaps = 9/147 (6%)
Query: 18 PNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSE 77
P+ L +YY RLFP + ++W+SYG K+YF REFSFTL +DIY+R+QSFN++
Sbjct: 7 PDLLPLYYRRLFPFSQYYRWLSYG------GLQKNYFQNREFSFTLKDDIYVRYQSFNTQ 60
Query: 78 SELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRY 137
+ELE +++ P KIDIG VYS P + + G F +E+EL+FDID+TDYDDVR
Sbjct: 61 NELEKEMQKMNPYKIDIGAVYSHRPNQHNTVKSG---TFQALEKELVFDIDMTDYDDVRS 117
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALR 164
CCS AD+C +CW LMT+AI+++D ALR
Sbjct: 118 CCSAADICSKCWTLMTIAIRILDRALR 144
>gi|378755144|gb|EHY65171.1| hypothetical protein NERG_01617 [Nematocida sp. 1 ERTm2]
Length = 284
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 109/188 (57%), Gaps = 22/188 (11%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
N L +YY +FP I KW+ Y REFSFTL NDIY+R+ + N+
Sbjct: 8 NLLGIYYRSIFPMDAIAKWLRY-------------IKTREFSFTLQNDIYIRYITVNTAD 54
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
EL + P K+DIG VY PA A +N+ + +EL+FDID+TDY +R C
Sbjct: 55 ELAVRMAVDVPQKLDIGGVYLHKPA-----AVTTENMC--MIKELVFDIDLTDY--IRAC 105
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
CS D+C +C PL+ A++V+D LR+ FGF HIL+V+SG RGVHCWV D A LT+
Sbjct: 106 CSDKDMCDKCMPLIKCAVEVLDNILRNVFGFCHILFVFSGGRGVHCWVSDAIAMTLTDRD 165
Query: 199 RGAIADYF 206
R I DY
Sbjct: 166 RANIVDYI 173
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
V++ +P+LD VS+ HLLK+PFC+HP+TGRVC+PID K+ + +PT +++R+
Sbjct: 206 VYSRLFPKLDANVSRQTKHLLKSPFCIHPRTGRVCVPIDIKEIDALRLEDIPTARDVVRK 265
Query: 381 LNTGD 385
+ D
Sbjct: 266 RDILD 270
>gi|68011300|ref|XP_671084.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56486937|emb|CAI03893.1| hypothetical protein PB301421.00.0 [Plasmodium berghei]
Length = 142
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 93/135 (68%), Gaps = 4/135 (2%)
Query: 89 PSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLEC 148
P K DIG VY+ +++ Q GD+ F P+++ELIFDID+ DYDD+R CC+ VC C
Sbjct: 7 PIKFDIGAVYNYPVSQK---CQKGDS-FRPIQKELIFDIDMNDYDDIRTCCADKKVCKLC 62
Query: 149 WPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRV 208
W +T+AI ++DT+LR+DF F +ILWVYSGRRG+HCWVCD R T + R A+ADY +
Sbjct: 63 WKFLTIAIVLLDTSLREDFAFQNILWVYSGRRGIHCWVCDESCRHYTTDARAALADYLNI 122
Query: 209 YKGNENSNKKVSFPG 223
G++ KKVS G
Sbjct: 123 LSGSDTKKKKVSIWG 137
>gi|345318389|ref|XP_001521650.2| PREDICTED: DNA primase small subunit-like, partial [Ornithorhynchus
anatinus]
Length = 334
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 166 DFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPL 225
DFGF H LWVYSGRRGVHCWVCD AR+L+ R I +Y + KG KKV +
Sbjct: 1 DFGFQHRLWVYSGRRGVHCWVCDASARKLSPAVRSGIVEYLSLVKGGREMVKKVHVGEKV 60
Query: 226 HPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGK---WQENR 282
HPF+ RS + ++ ++FE+ + Q+ +++ER++K+++++P++ + +RG +E
Sbjct: 61 HPFVRRSVS-LVEDYFEDYAVDGQDFLASKERWDKVIALVPEDILRPVVRGAAAPLRETL 119
Query: 283 RSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLK 342
+S K + RW LK L+ ++ + + R E++ +PRLD VSK HLLK
Sbjct: 120 QSDLPKLPGSRQRWHHLKKVLEQHQKATRPVSRSDWEVMLQLCFPRLDANVSKSLGHLLK 179
Query: 343 APFCVHPKT 351
+PF VHPKT
Sbjct: 180 SPFSVHPKT 188
>gi|300707511|ref|XP_002995960.1| hypothetical protein NCER_101019 [Nosema ceranae BRL01]
gi|239605208|gb|EEQ82289.1| hypothetical protein NCER_101019 [Nosema ceranae BRL01]
Length = 293
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 127/246 (51%), Gaps = 29/246 (11%)
Query: 17 NPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNS 76
N Y K+YY R FP IFKW+ +C RE SFTL+N I+ R+Q+F+
Sbjct: 2 NSYYSKLYYERFFPSKKIFKWLKIN------SC-------RELSFTLENGIFTRYQTFSD 48
Query: 77 ESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVR 136
+ + KIDIG VY V P K + + VE+EL+FD+D+TDY+ R
Sbjct: 49 YESFRKRLNDLTFEKIDIGAVYDVKPEK--------NKIKKAVEKELVFDVDLTDYN--R 98
Query: 137 YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
CC ++C C L+ V++++++ L+++ GF + +V+SGRRGVHCWV D A + +
Sbjct: 99 TCCIDKNICERCISLIKVSVELLEYILKEELGFKKLCFVFSGRRGVHCWVTDSYASKFSE 158
Query: 197 EQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEE 256
E RG I Y E + L+R ++ + F EK L+ F ++
Sbjct: 159 EIRGHIVSYI------EKVCASCMYSDKYTEILMRYIPYLIDQGFVEKSNLTSQKFVKDK 212
Query: 257 RYEKIL 262
++ +IL
Sbjct: 213 KFLQIL 218
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 46/76 (60%)
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELL 378
+I++ + ++D EV+K HL+K PFC+HP + + +PIDP + +F ++ L +L+
Sbjct: 216 QILYDKMFLKIDSEVTKSLIHLIKMPFCIHPASQMLSLPIDPGNLNDFVQNSMIKLEDLI 275
Query: 379 RELNTGDSRMDVDNEW 394
+ N ++ + + + W
Sbjct: 276 KNPNLLNNALKILDSW 291
>gi|159107900|ref|XP_001704225.1| DNA pol/primase, small sub [Giardia lamblia ATCC 50803]
gi|157432281|gb|EDO76551.1| DNA pol/primase, small sub [Giardia lamblia ATCC 50803]
Length = 449
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 167/357 (46%), Gaps = 66/357 (18%)
Query: 56 RREFSFTL----DNDIYLRFQSFNSESELENSIK------EKCPSKIDIGPVYSVDPAKR 105
RRE+S+ + D RF+ + +L + ++ E K+DIGPVY+ D ++R
Sbjct: 39 RREWSYEIITATDETFVTRFREISDAEQLRSILRFSSKTLEDFKLKLDIGPVYTSDMSQR 98
Query: 106 HAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRD 165
+ FAP EREL+FDID DYD +R CC+G +C +CW M +A+ ++ R
Sbjct: 99 KTQPE-----FAPCERELVFDIDAGDYDRIRTCCAGPAMCDKCWRFMELAVPLLILFCRV 153
Query: 166 DFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPL 225
GF+ +V+SGRRG+HCW+CD +AR+L+ + R ++ D F + + S + S+
Sbjct: 154 H-GFNDYFFVFSGRRGLHCWICDARARKLSKDSRKSMVDAFNIISIDTGSVLRESYDHS- 211
Query: 226 HPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSS 285
+L R + + F ++L QN E+ L+ ES+ +ELR +
Sbjct: 212 -NWLCRLIHDHICIRFFSQMLEEQNWLGGG--VEEHLAKYSKESLLTELR----RADSAL 264
Query: 286 NSKEDINFF----------------------------RWEQLKNT-------LQSGKQKV 310
S I FF R+ L T + S +
Sbjct: 265 FSSAPIFFFLHITLCIYSCLVAGGYPVTTGSAKNSDGRFASLLTTFIGKLTMITSSAARW 324
Query: 311 QGLRRCVEE-------IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP 360
L +++ I +TYPR D+EV++ NHLLK PF VH K+ ++ +P P
Sbjct: 325 TELELLIKDYDPILAAIRVYYTYPRFDVEVTRGMNHLLKIPFSVHSKSRKISVPFPP 381
>gi|402467438|gb|EJW02739.1| hypothetical protein EDEG_02860 [Edhazardia aedis USNM 41457]
Length = 305
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 138/255 (54%), Gaps = 33/255 (12%)
Query: 24 YYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENS 83
YYG +FP ++K++ P REFS TL + Y+R SF+S ++ +
Sbjct: 12 YYGSVFPVETLYKFLY-----ESP--------NREFSMTLQGNKYVRALSFDSPQKMRSM 58
Query: 84 IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
+ K P K+DIG VYS PA G + F P+++EL+FD+D+TDY R CC+G
Sbjct: 59 LISKIPEKLDIGAVYSSAPA------MGKE--FHPIQKELVFDVDLTDYK--RNCCNGKK 108
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+C C+ L+ + K++D L FGF +IL+V+SG RG+H WVCD +AR L +++R I
Sbjct: 109 ICDLCFTLVKCSAKLMDYILTKIFGFKYILYVFSGGRGIHIWVCDEEARFLDDKERKGII 168
Query: 204 DYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNL---FSTEERYEK 260
+Y Y + N + SF H + +L+E+ + QN+ T+ E
Sbjct: 169 NYVDFYNISNNESSTTSF----HKTIDDEILNILKEY--QYFFGDQNMNIEVDTKALIEY 222
Query: 261 ILSMIPDESVTSELR 275
+ I D++VTSE++
Sbjct: 223 LYVKI-DKNVTSEMK 236
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 34/60 (56%)
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
+ + Y ++D V+ HLLK+PF +HP + R+ +P++ + + +P L +++ +
Sbjct: 219 LIEYLYVKIDKNVTSEMKHLLKSPFSIHPISRRISVPLNIDNIDSIKIADLPFLDDIMTD 278
>gi|297838195|ref|XP_002886979.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332820|gb|EFH63238.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
Query: 210 KGNENSNKKVSFPGPLH-PFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDE 268
KGNENS K V G H PFL RS + L+ FFE++L +Q++FS++E+YEKIL MI DE
Sbjct: 15 KGNENSAKNVDLMGHSHQPFLARSCVDFLKNFFEDELHATQSIFSSKEKYEKILGMITDE 74
Query: 269 SVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPR 328
+ SELRG+W+ + RSS S+E + RWEQLK TLQS K LR CVEEIVF F YPR
Sbjct: 75 DIQSELRGEWENSARSSPSEEATSLLRWEQLK-TLQSKNNKALSLRTCVEEIVFNFIYPR 133
Query: 329 LDMEVSK 335
+D+EVSK
Sbjct: 134 IDLEVSK 140
>gi|297724039|ref|NP_001174383.1| Os05g0358200 [Oryza sativa Japonica Group]
gi|255676295|dbj|BAH93111.1| Os05g0358200, partial [Oryza sativa Japonica Group]
Length = 92
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 77/88 (87%)
Query: 352 GRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFL 411
GRVC+PIDP +C++FDPTTVPTLS+LL ELN R D +N+WE+TSL KSIRFFR+SFL
Sbjct: 5 GRVCVPIDPNNCDDFDPTTVPTLSQLLGELNAAGLRTDSENDWERTSLEKSIRFFRASFL 64
Query: 412 QPLLKSCKEEMESGYKAKIQQTKNSLSW 439
QPLLK+CKEE+ES Y AK+QQ+KN+L+W
Sbjct: 65 QPLLKACKEELESSYNAKLQQSKNTLTW 92
>gi|70929878|ref|XP_736933.1| small subunit DNA primase [Plasmodium chabaudi chabaudi]
gi|56511894|emb|CAH75124.1| small subunit DNA primase, putative [Plasmodium chabaudi chabaudi]
Length = 126
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 86/125 (68%), Gaps = 2/125 (1%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
ELIFDID+ DYDD+R CCS VC CW +T+AI ++DT+LR+DF F +ILWVYSGRRG
Sbjct: 1 ELIFDIDMNDYDDIRTCCSDKKVCKLCWKFLTIAIVLLDTSLREDFAFQNILWVYSGRRG 60
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGP-LHPFLVRSYTEVLREF 240
+HCWVCD R T + R A+ADY + G++ KKVS G +P L R++ ++ ++
Sbjct: 61 IHCWVCDESCRHYTTDARAALADYLNILSGSDTKKKKVSIWGKEKYPMLERAF-DICYKY 119
Query: 241 FEEKL 245
F+ L
Sbjct: 120 FDVLL 124
>gi|326468519|gb|EGD92528.1| hypothetical protein TESG_08236 [Trichophyton tonsurans CBS 112818]
Length = 1969
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query: 154 VAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNE 213
++IKVID ALRDDFGF HILWVYSGRRG H WVCD AR L +++R AIA Y V +G
Sbjct: 1 MSIKVIDAALRDDFGFQHILWVYSGRRGAHAWVCDKVARNLPDDRRRAIAGYLEVVRGGS 60
Query: 214 NSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSE 273
S K+V+ PLHP + RS + LRE+F +L+ Q+ FS ++ +++ ++PD+++ +
Sbjct: 61 QSGKRVNLRRPLHPHITRS-IDTLREYFASTVLVDQDPFSRPDQAARLIELLPDKTLRAA 119
Query: 274 LRGKW 278
L+ KW
Sbjct: 120 LQKKW 124
>gi|303390242|ref|XP_003073352.1| DNA primase small subunit [Encephalitozoon intestinalis ATCC 50506]
gi|303302498|gb|ADM11992.1| DNA primase small subunit [Encephalitozoon intestinalis ATCC 50506]
Length = 281
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 127/259 (49%), Gaps = 41/259 (15%)
Query: 15 GFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSF 74
G + +K YY LFP IFK + + RE SF L + Y+RF +F
Sbjct: 2 GLDERLMKTYYRTLFPLDLIFKCLRIDEN-------------REISFGLGSGGYIRFLTF 48
Query: 75 NSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDD 134
+ E + P +ID+G +Y P K + G +EL+FD+D+TDY
Sbjct: 49 KTAEEFRKKLLGIVPERIDVGAIYKDRPVKHNVPKVAG--------KELVFDVDLTDYP- 99
Query: 135 VRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRL 194
R CC+ VC +C L+ VA++++D +LR +FGF ++ +V+SGRRG+HCWV D A L
Sbjct: 100 -RECCTEKLVCNKCLVLIKVAVRILDYSLRKEFGFKNVGFVFSGRRGMHCWVFDEAALEL 158
Query: 195 TNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
+ +RG I Y+ + KKV + Y E+LRE+ L F
Sbjct: 159 NDIERGEIVRYY-----DTVVKKKV---------YSKEYEEILREY---SFFLGDETFKE 201
Query: 255 EERYEKILSMIPDESVTSE 273
E +EK+ I D+ VT +
Sbjct: 202 SELFEKMYIRI-DKEVTQK 219
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
+F Y R+D EV++ HL+K PF VHP T + +PIDP + P L ++L
Sbjct: 204 LFEKMYIRIDKEVTQKSKHLIKMPFSVHPSTEIISVPIDPSSLDSVKLEDFPRLGDVLES 263
Query: 381 LNTGDSRMDVDNEWEKTS 398
+ + +W S
Sbjct: 264 PERLQPYLGIAEKWRGLS 281
>gi|401827300|ref|XP_003887742.1| DNA primase catalytic subunit [Encephalitozoon hellem ATCC 50504]
gi|392998749|gb|AFM98761.1| DNA primase catalytic subunit [Encephalitozoon hellem ATCC 50504]
Length = 279
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 39/227 (17%)
Query: 15 GFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSF 74
G + ++ YY LFP +FK + + RE SF L + Y+RF +F
Sbjct: 2 GLDQQLVRTYYRTLFPLDLMFKCLRIDEN-------------REVSFGLASGGYIRFLTF 48
Query: 75 NSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDD 134
+ E + P +ID+G +Y PAK + G +EL+FD+D+TDY
Sbjct: 49 RTADEFRKKLLGIVPERIDVGAIYRDRPAKHNVPRVAG--------KELVFDVDLTDYP- 99
Query: 135 VRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRL 194
R CC+ VC +C L+ +A++++D +LR++FGF ++ +V+SGRRGVHCWV DG A L
Sbjct: 100 -RKCCTEKLVCNKCLVLIKIAVRILDYSLREEFGFKNVGFVFSGRRGVHCWVFDGTALEL 158
Query: 195 TNEQRGAIADYF-RVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREF 240
++ +RG I Y+ V K +S + Y+E+LRE+
Sbjct: 159 SDIERGEIVKYYDSVVKKKMHSEE---------------YSEILREY 190
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
E +F Y R+D EV++ HL+K PF VHP T + +PIDP D E P L ++
Sbjct: 201 ESTLFERMYIRVDKEVTQKSKHLIKMPFSVHPNTEIISVPIDPLDLESVKLENFPKLKDV 260
Query: 378 LRELNTGDSRMDVDNEW 394
L D + + W
Sbjct: 261 LESPERLDRYVSIAKSW 277
>gi|253743530|gb|EES99895.1| DNA pol/primase, small sub [Giardia intestinalis ATCC 50581]
Length = 450
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 110/198 (55%), Gaps = 24/198 (12%)
Query: 34 IFKWMSYGNDGRHPACDKSYFGRREFSFTL----DNDIYLRFQSFNSESELENSI----- 84
I KW++Y +G P +RE+S+ + D RF+ + +L + +
Sbjct: 25 IVKWLTY--NGSVPT------QKREWSYEIITATDETFVTRFREIAAAEQLRSVLCFSPK 76
Query: 85 -KEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGAD 143
E K+DIGP+Y+ D ++R FAP EREL+FDID DYD +R CC+GAD
Sbjct: 77 TLEDFKLKLDIGPIYTSDMSQRKTQPD-----FAPCERELVFDIDAGDYDRIRTCCAGAD 131
Query: 144 VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIA 203
+C +CW M +A+ ++ R GF + + +SGRRG+HCW+CD +AR+L+ E R +I
Sbjct: 132 MCDKCWRFMELAVPLLILFCRVH-GFSNYFFAFSGRRGLHCWICDARARKLSKEARKSIV 190
Query: 204 DYFRVYKGNENSNKKVSF 221
D F + + S +VS+
Sbjct: 191 DAFNIVSVDTGSVLRVSY 208
>gi|19173389|ref|NP_597192.1| DNA POLYMERASE ALPHA COMPLEX [Encephalitozoon cuniculi GB-M1]
Length = 298
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 140/277 (50%), Gaps = 45/277 (16%)
Query: 1 MLIDGPKQGNVIP----DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGR 56
ML+D + +I G +P ++ YY LFP +F+ + D+S
Sbjct: 1 MLMDVHHRNKIIALILGMGLDPQLMRTYYRTLFPLDLMFRCLR---------IDES---- 47
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
RE SF L + Y+RF +F + E + P KID+G +Y P K H+ ++
Sbjct: 48 REISFGLGSGGYIRFLTFRTADEFRKKLMGIAPDKIDVGAIYRDRPTK-HSISR------ 100
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVY 176
V +EL+FD+D+TDY R CCS VC C L+ A+++++ +LR++FGF + +V+
Sbjct: 101 -VVGKELVFDVDLTDYP--RECCSEKLVCNRCLVLIKAAVEILNYSLREEFGFKDVGFVF 157
Query: 177 SGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEV 236
SGRRGVHCWV D +A L++ +RG I Y+ ++ KK +P Y +
Sbjct: 158 SGRRGVHCWVFDDEALELSDLERGEIVKYY------DSVAKKKKYP--------EEYRRI 203
Query: 237 LREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSE 273
LR++ LL E +EK+ I D+ VT +
Sbjct: 204 LRKYSS---LLGDKDLEDSELFEKMYLRI-DKEVTQK 236
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
+F Y R+D EV++ HL+K PF VHP T + +PID + + P L ++L
Sbjct: 221 LFEKMYLRIDKEVTQKTKHLIKMPFSVHPSTEMISVPIDVSNLDTIRLEDFPRLKDVLES 280
Query: 381 LNTGDSRMDVDNEWEKTS 398
+D+ N+W S
Sbjct: 281 PERLKPYLDIANKWRALS 298
>gi|392512807|emb|CAD26368.2| DNA POLYMERASE ALPHA COMPLEX [Encephalitozoon cuniculi GB-M1]
Length = 281
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 134/261 (51%), Gaps = 41/261 (15%)
Query: 15 GFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSF 74
G +P ++ YY LFP +F+ + D+S RE SF L + Y+RF +F
Sbjct: 2 GLDPQLMRTYYRTLFPLDLMFRCLR---------IDES----REISFGLGSGGYIRFLTF 48
Query: 75 NSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDD 134
+ E + P KID+G +Y P K H+ ++ V +EL+FD+D+TDY
Sbjct: 49 RTADEFRKKLMGIAPDKIDVGAIYRDRPTK-HSISR-------VVGKELVFDVDLTDYP- 99
Query: 135 VRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRL 194
R CCS VC C L+ A+++++ +LR++FGF + +V+SGRRGVHCWV D +A L
Sbjct: 100 -RECCSEKLVCNRCLVLIKAAVEILNYSLREEFGFKDVGFVFSGRRGVHCWVFDDEALEL 158
Query: 195 TNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFST 254
++ +RG I Y+ ++ KK +P Y +LR++ LL
Sbjct: 159 SDLERGEIVKYY------DSVAKKKKYP--------EEYRRILRKYSS---LLGDKDLED 201
Query: 255 EERYEKILSMIPDESVTSELR 275
E +EK+ I D+ VT + +
Sbjct: 202 SELFEKMYLRI-DKEVTQKTK 221
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
+F Y R+D EV++ HL+K PF VHP T + +PID + + P L ++L
Sbjct: 204 LFEKMYLRIDKEVTQKTKHLIKMPFSVHPSTEMISVPIDVSNLDTIRLEDFPRLKDVLES 263
Query: 381 LNTGDSRMDVDNEWEKTS 398
+D+ N+W S
Sbjct: 264 PERLKPYLDIANKWRALS 281
>gi|449328812|gb|AGE95088.1| DNA polymerase alpha complex [Encephalitozoon cuniculi]
Length = 298
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 115/210 (54%), Gaps = 27/210 (12%)
Query: 1 MLIDGPKQGNVIP----DGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGR 56
ML+D + +I G +P ++ YY LFP +F+ + D+S
Sbjct: 1 MLMDVHHRNKIIALILGMGLDPQLMRTYYRTLFPLDLMFRCLR---------IDES---- 47
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
RE SF L + Y+RF +F + E + P KID+G +Y P K H+ ++
Sbjct: 48 REISFGLGSGGYIRFLTFRTADEFRKKLMGIAPDKIDVGAIYRDRPTK-HSISR------ 100
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVY 176
V +EL+FD+D+TDY R CCS VC C L+ A+++++ +LR++FGF + +V+
Sbjct: 101 -VVGKELVFDVDLTDYP--RECCSEKLVCNRCLVLIKAAVEILNYSLREEFGFKDVGFVF 157
Query: 177 SGRRGVHCWVCDGKARRLTNEQRGAIADYF 206
SGRRGVHCWV D +A L++ +RG I Y+
Sbjct: 158 SGRRGVHCWVFDDEALELSDLERGEIVKYY 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
+F Y R+D EV++ HL+K PF VHP T + +PID + + P L ++L
Sbjct: 221 LFEKMYLRIDKEVTQKTKHLIKMPFSVHPSTEMISVPIDVSNLDTIRLEDFPRLKDVLES 280
Query: 381 LNTGDSRMDVDNEWEKTS 398
+D+ N+W S
Sbjct: 281 PERLKPYLDIANKWRALS 298
>gi|297851478|ref|XP_002893620.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339462|gb|EFH69879.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 85
Score = 126 bits (316), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
Query: 313 LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP-TTV 371
LR CVEEIVF F YPR+D+EVSK NHLLKAPFCVHP TGRVC+PIDP +C+EFDP V
Sbjct: 4 LRTCVEEIVFNFIYPRIDLEVSKKMNHLLKAPFCVHPNTGRVCVPIDPNNCDEFDPLLEV 63
Query: 372 PTLSELLRELNTGDSRMDVDNE 393
PTLS+++ E+N+ MDVD++
Sbjct: 64 PTLSQIIEEINSAGLNMDVDDD 85
>gi|402583554|gb|EJW77498.1| DNA primase small subunit, partial [Wuchereria bancrofti]
Length = 220
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 108/225 (48%), Gaps = 23/225 (10%)
Query: 167 FGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLH 226
FGF H LWV+SGRRG+HCWV D AR+L N R A+ +Y + + +K S +H
Sbjct: 2 FGFKHCLWVFSGRRGIHCWVADAAARKLQNAGRMAVVEYLSLVTSGQKISKAASKRTFVH 61
Query: 227 PFLVRSYTEVLREFFE----EKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENR 282
P L Y+ +++ +L+L Q S + +L +E V E+R E +
Sbjct: 62 PMLEDVYSYLMQWSLSASDVSELMLEQGWMSNDGLMS-LLDGCINEEVEKEIREIIVEVK 120
Query: 283 RSSNSKEDINFFRWEQLK---NTLQSGKQKVQGLRRC----------VEEIVFAFTYPRL 329
K+ RW L+ + + + K G+ C V YPRL
Sbjct: 121 TVDCLKK-----RWNALRIKFDKYKRAELKKNGIELCEVASLQSSFHFRGYVLQHAYPRL 175
Query: 330 DMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTL 374
D+ VS NHLLK+PFCVHPKTG + +PI+P + D +P +
Sbjct: 176 DIHVSAGINHLLKSPFCVHPKTGLIAVPINPNQVSDMDLAKLPRI 220
>gi|300176392|emb|CBK23703.2| unnamed protein product [Blastocystis hominis]
Length = 122
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%)
Query: 109 AQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFG 168
+ G + F P+ RELIFDID+ DY VRYCC GA++C +CW MT A V+ + L +FG
Sbjct: 2 SHKGGSAFKPIARELIFDIDMDDYSSVRYCCEGANICPKCWKFMTNAAMVLKSILTKEFG 61
Query: 169 FDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADY 205
F HIL+VYSGRRG+H WVCD +AR LT+ QR I +Y
Sbjct: 62 FKHILFVYSGRRGIHIWVCDRRARSLTDYQRSNIVNY 98
>gi|396081864|gb|AFN83478.1| DNA primase small subunit [Encephalitozoon romaleae SJ-2008]
Length = 279
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 120/241 (49%), Gaps = 40/241 (16%)
Query: 15 GFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSF 74
G + + YY LFP +FK + + RE SF L + Y+RF +F
Sbjct: 2 GLDQQLARTYYRTLFPIDLMFKCLRIDEN-------------REVSFGLASGGYIRFLTF 48
Query: 75 NSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDD 134
+ E + P +ID+G +Y P K +A G +EL+FD+D+TDY
Sbjct: 49 RTADEFRKKLLGIVPERIDVGAIYRDRPTKHNAPKIVG--------KELVFDVDLTDYP- 99
Query: 135 VRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRL 194
R CCS +C +C L+ VA+K++D +L+ + GF ++ +V+SGRRGVHCWV D A L
Sbjct: 100 -RECCSKKLICNKCLVLIKVAVKILDYSLKQELGFKNVGFVFSGRRGVHCWVFDDTALEL 158
Query: 195 TNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLRE---FFEEKLLLSQNL 251
++ +RG I Y+ + +++ Y+++LRE FFE + L L
Sbjct: 159 SDIERGEIVRYYDCVAKRKMYSEE--------------YSKILREYSPFFESEGLEESVL 204
Query: 252 F 252
F
Sbjct: 205 F 205
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 318 EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
E ++F Y R+D EV++ HL+K PF VHP T + +PIDP D + P L ++
Sbjct: 201 ESVLFERMYIRIDKEVTQKSKHLIKMPFSVHPSTEIISVPIDPSDLDSVKLEDFPRLKDV 260
Query: 378 LRELNTGDSRMDVDNEW 394
L D +DV W
Sbjct: 261 LESPERLDPYLDVARSW 277
>gi|308163206|gb|EFO65565.1| DNA pol/primase, small sub [Giardia lamblia P15]
Length = 449
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 101/176 (57%), Gaps = 16/176 (9%)
Query: 56 RREFSFTL----DNDIYLRFQSFNSESELENSIK------EKCPSKIDIGPVYSVDPAKR 105
RRE+S+ + D RF+ + +L + ++ E K+DIGP+Y+ D ++R
Sbjct: 39 RREWSYEMITATDETFVARFREISDAEQLRSVLRFSPRTLEDFKLKLDIGPIYTSDMSQR 98
Query: 106 HAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRD 165
+ FAP EREL+FDID DYD +R CC+G +C +CW M +A+ ++ R
Sbjct: 99 KTQPE-----FAPCERELVFDIDAGDYDRIRTCCTGPAMCDKCWRFMELAVPLLILFCRV 153
Query: 166 DFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSF 221
GF+ +V+SGRRG+HCW+CD +AR+L+ + R ++ D F + + S + S+
Sbjct: 154 H-GFNDYFFVFSGRRGLHCWICDARARKLSKDSRKSMVDAFNLISMDTGSVLRESY 208
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 29/108 (26%)
Query: 295 RWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
RW +L+ ++ + + +R +TYPR D+EV++ NHLLK PF VH K+ ++
Sbjct: 323 RWTELELLIKDYEPILAAIR-------VYYTYPRFDVEVTRGMNHLLKIPFSVHSKSRKI 375
Query: 355 CIP------------------IDPKDCEE----FDPTTVPTLSELLRE 380
+P + P D ++ F P+ PT+ +LL E
Sbjct: 376 SVPFPAAPILKNYSIDTGVLQLGPLDTDDSLPRFLPSEAPTVDDLLSE 423
>gi|429961364|gb|ELA40909.1| hypothetical protein VICG_02049 [Vittaforma corneae ATCC 50505]
Length = 266
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 98/189 (51%), Gaps = 25/189 (13%)
Query: 19 NYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSES 78
N LKVYY LFP +++ + GRRE SF Y+R+ +F+S
Sbjct: 5 NELKVYYRELFPLQLLYETLEIN-------------GRREVSFFTSTGSYMRYLTFDSAE 51
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
++ P KID+GPVY + P+K N PV RE++FDID+TDY R C
Sbjct: 52 LFREKLELVNPRKIDLGPVYDIKPSK--------SNGAVPVAREIVFDIDLTDYP--REC 101
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
C +C C+ + AI ++D +LR +FGF +V+SGRRGVHCWV + K L
Sbjct: 102 CKDKKICNLCYEKIKCAINILDYSLRTEFGFTSYGFVFSGRRGVHCWVLEMK--ELPTHV 159
Query: 199 RGAIADYFR 207
R I +F+
Sbjct: 160 RNDIFKFFQ 168
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 326 YPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGD 385
+PR+D +V+ NHL+K PF VHP T + +P+DP E + +PTLS+ + +
Sbjct: 197 FPRIDKQVTVSMNHLIKMPFSVHPDTFNISVPLDPNSITELE--DIPTLSQAVASPAVLE 254
Query: 386 SRMDVDNEWEK 396
+V W++
Sbjct: 255 PYYEVLKTWKR 265
>gi|407033593|gb|EKE36891.1| DNA primase small subunit domain containing protein [Entamoeba
nuttalli P19]
Length = 300
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 132/272 (48%), Gaps = 36/272 (13%)
Query: 7 KQGNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDND 66
KQ NV+ + F FP ++W++ +G+ Y RE + N
Sbjct: 47 KQTNVVVEKF------------FPSKLFYQWVT--RNGK-------YSQTRELAAFKTNS 85
Query: 67 IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFD 126
+ R+ FNS +L N + P +I+IGP++ ++Q RE + D
Sbjct: 86 FFNRYLHFNSSYDLSNYLSRYVPERIEIGPIFD-----HLLFSQTN----TATMREFVID 136
Query: 127 IDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
IDI DYDDVRYCCS VC CW L++ A KVI ++ FG HIL V+SGRRG+H W+
Sbjct: 137 IDIDDYDDVRYCCSSTQVCKRCWILISCAAKVIHHIFQEQFGMKHILNVFSGRRGIHFWI 196
Query: 187 CDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLH---PFLVRSYTEVLREFFEE 243
CD +A + R I YF + N+ NK +H P Y ++L +FE+
Sbjct: 197 CDEQALHFNEQMRTYITKYFSLV-TNQCINKDNHPIIDIHEEYPLYNEVY-QILEPYFED 254
Query: 244 KLLLSQNLFSTEERYEKILSMIPDESVTSELR 275
Q +F E+R E++L+++P + +R
Sbjct: 255 -YCEKQEIFKNEQRKEQLLNLLPQNETSQVIR 285
>gi|449691701|ref|XP_004212767.1| PREDICTED: DNA primase small subunit-like, partial [Hydra
magnipapillata]
Length = 129
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 78/119 (65%), Gaps = 9/119 (7%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
LK YY RLFP+ +KW+ YG D KSYF REFSFTL +DIY+R+ SF +EL
Sbjct: 20 LKQYYKRLFPYKLYYKWLQYGEDS------KSYFENREFSFTLKDDIYIRYLSFADANEL 73
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCC 139
E +++K P KIDIG +Y+ P K + Q G VF E+EL+FDID+TDYD VR CC
Sbjct: 74 EKEMQKKVPYKIDIGAIYNYKP-KDNKQLQAG--VFKAEEKELVFDIDMTDYDTVRTCC 129
>gi|169806650|ref|XP_001828069.1| DNA primase small subunit [Enterocytozoon bieneusi H348]
gi|161779197|gb|EDQ31221.1| DNA primase small subunit [Enterocytozoon bieneusi H348]
Length = 275
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 104/191 (54%), Gaps = 25/191 (13%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
LK YY ++FP+ +F S RE SF D+ ++R+++FN+ +E
Sbjct: 14 LKQYYSKIFPYKTLFDIFSIN-------------SFRELSFGKDDTTFIRYETFNTCNEF 60
Query: 81 ENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCS 140
++ I P +IDIG VY P+K G +N + +EL+FD+D+TDYD R CC
Sbjct: 61 KDKILSLNPHRIDIGAVYDNKPSK-----TGNNNA---IRKELVFDMDLTDYD--RNCCK 110
Query: 141 GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRG 200
+C +C+ L+ I+++D +++FGF + +V+SGRRG+HCWV + LT + R
Sbjct: 111 EKTMCEKCYELIKCGIEILDYIFKEEFGFLNYGFVFSGRRGIHCWVFN--ENDLTEQVRM 168
Query: 201 AIADYFRVYKG 211
I Y + K
Sbjct: 169 DIIKYLDIKKN 179
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 326 YPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGD 385
+P LD +V+ HL+K PF +HP T +V IP+D ++ + F T++PT+ + L +
Sbjct: 208 FPILDKQVTIKLTHLIKIPFSIHPNTMKVSIPLDSQNIKSF--TSLPTVYDFLNGTENIN 265
Query: 386 SRMDVDNEWE 395
+ +++ W+
Sbjct: 266 NYINIMETWK 275
>gi|322796379|gb|EFZ18920.1| hypothetical protein SINV_15337 [Solenopsis invicta]
Length = 205
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 24/206 (11%)
Query: 231 RSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKED 290
R +++ F E + QN+ TEE EK L ++P++ E++ + S E
Sbjct: 6 RRALDIIDPIFVEMSVKEQNMLGTEEAIEKFLPILPNDEDRQEVKMLF--------STES 57
Query: 291 INFFRWEQLKNTLQS----GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFC 346
+ RW ++S G +K R +EEI ++YPRLD+ VSK NHLLK+PFC
Sbjct: 58 TSEARWNTFVQYIESKRTGGDRKWYLYRHLIEEIKLQYSYPRLDINVSKGLNHLLKSPFC 117
Query: 347 VHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNE-----------WE 395
VHPKTG++C+P + ++FDP VPT+ L+ E+N D + + E ++
Sbjct: 118 VHPKTGKICVPFNASAVDKFDPDKVPTIMTLIDEINAYDVKDKAEEEMYDLNKKRIKDYK 177
Query: 396 KTSLGKSIRFFRSSFLQPLLKSCKEE 421
KTSL KS+ F+ FL+ L +EE
Sbjct: 178 KTSLNKSLHIFQ-EFLRHLEAERREE 202
>gi|207344242|gb|EDZ71451.1| YIR008Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 159
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 9/166 (5%)
Query: 9 GNVIPDGFNPNYLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIY 68
+V +G + + ++ YY L+P IF W+ N P+ D REF+ + Y
Sbjct: 3 NSVKTNGPSSSDMEYYYKSLYPFKHIFNWL---NHSPKPSRD---MINREFAMAFRSGAY 56
Query: 69 LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDID 128
R+ SFNS + + I++ P + +IG +Y+ P +R + +E+EL+FDID
Sbjct: 57 KRYNSFNSVQDFKAQIEKANPDRFEIGAIYNKPPRERDTLLKSE---LKALEKELVFDID 113
Query: 129 ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILW 174
+ DYD R CCSGA VC +CW +++A+K+++TALR+DFG+ +W
Sbjct: 114 MDDYDAFRTCCSGAQVCSKCWKFISLAMKIMNTALREDFGYKDFIW 159
>gi|297262718|ref|XP_001098855.2| PREDICTED: DNA primase small subunit-like, partial [Macaca mulatta]
Length = 190
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 104/176 (59%), Gaps = 11/176 (6%)
Query: 211 GNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESV 270
G ++ KKV +HPF +R +++++FEE L++Q++ +E ++KIL+++P+ +
Sbjct: 1 GGQDVKKKVHLSEKIHPF-IRKSINIIKKYFEEYALVNQDILKNKESWDKILALVPENIL 59
Query: 271 TSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR---CVEEIVFAFTYP 327
+ +++ S + RWE LK + ++ + EI+ + +P
Sbjct: 60 S-------RDHFCVSXXXSHNSLQRWEHLKKVASRCQNNIKNDKYGPWLEWEIMLQYCFP 112
Query: 328 RLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNT 383
RLD+ VSK NHLLK+PF VHPKTGR+ +PID + ++FDP TVPT+S + REL+
Sbjct: 113 RLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTISFICRELDA 168
>gi|380795451|gb|AFE69601.1| DNA primase small subunit, partial [Macaca mulatta]
Length = 210
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 26/210 (12%)
Query: 229 LVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSK 288
+R +++++FEE L++Q++ +E ++KIL+++P E + EL+ +Q +S NS
Sbjct: 1 FIRKSINIIKKYFEEYALVNQDILKNKESWDKILALVP-EIIHDELQQGFQ---KSHNSL 56
Query: 289 EDINFFRWEQLKNTLQSGKQKVQGLRR---CVEEIVFAFTYPRLDMEVSKHRNHLLKAPF 345
+ RWE LK + ++ + EI+ + +PRLD+ VSK NHLLK+PF
Sbjct: 57 Q-----RWEHLKKVASRCQNNIKNDKYGPWLEWEIMLQYCFPRLDINVSKGINHLLKSPF 111
Query: 346 CVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNT----------GDSRMDVDN--- 392
VHPKTGR+ +PID + ++FDP TVPT+S + REL+ ++ DV +
Sbjct: 112 SVHPKTGRISVPIDLQKVDQFDPFTVPTISFICRELDAISINEEEKEENEAESDVKHRTR 171
Query: 393 EWEKTSLGKSIRFFRSSFLQPLLKSCKEEM 422
+++KTSL ++ F FL+ L KS K E+
Sbjct: 172 DYKKTSLAPYVKVF-EHFLENLDKSRKGEL 200
>gi|241640412|ref|XP_002410876.1| DNA polymerase alpha subunit IV, putative [Ixodes scapularis]
gi|215503589|gb|EEC13083.1| DNA polymerase alpha subunit IV, putative [Ixodes scapularis]
Length = 206
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 16/189 (8%)
Query: 227 PFL-VRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSS 285
P++ V + ++L++ F L +Q + ++ + +++ PDES E+R + S
Sbjct: 2 PYIQVTASLKILKKSFSTLTLENQRILEDDKFWHGVINNCPDESSKEEIR----KCVLSP 57
Query: 286 NSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPF 345
S E RW + + ++ K+K + VEE++ YPRLD+ V+K HLLKAPF
Sbjct: 58 TSSEQ----RWTEFVDAVERLKRKSLKCQFLVEEVMLELCYPRLDIAVTKGVQHLLKAPF 113
Query: 346 CVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMD-------VDNEWEKTS 398
CVHPKTGRVC+PID + FDPT VPT+ +L E++ D+ V +++KTS
Sbjct: 114 CVHPKTGRVCVPIDVTNVHAFDPTKVPTVCDLFNEIDAYDANQKESENTSPVMKDYKKTS 173
Query: 399 LGKSIRFFR 407
L SI F+
Sbjct: 174 LAPSISLFQ 182
>gi|68063433|ref|XP_673711.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491760|emb|CAI02503.1| hypothetical protein PB300792.00.0 [Plasmodium berghei]
Length = 130
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
++EIVF FTYPRLD+ VSK NHLLK+PFC+H TGRVC+PID K ++F+P VPTL +
Sbjct: 5 IKEIVFHFTYPRLDINVSKEINHLLKSPFCIHNGTGRVCVPIDIKQIDKFNPQLVPTL-K 63
Query: 377 LLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMES 424
LLRE +D E+ +TSL + +FR +F++ +L SC E+ +S
Sbjct: 64 LLREQFDDPQNSHIDTEY-RTSLKSYVDYFRHNFVENILLSCVEKRKS 110
>gi|70951129|ref|XP_744830.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524942|emb|CAH77330.1| hypothetical protein PC000150.02.0 [Plasmodium chabaudi chabaudi]
Length = 143
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
Query: 317 VEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSE 376
++EIVF FTYPRLD+ VSK NHLLK+PFC+H TGRVC+P+D K ++F+P VPTL +
Sbjct: 29 IKEIVFHFTYPRLDINVSKEINHLLKSPFCIHNGTGRVCVPLDIKQIDKFNPQLVPTL-K 87
Query: 377 LLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMES 424
LLRE +D E+ +TSL + +FR +F++ +L SC E+ S
Sbjct: 88 LLREQFDDPQNSHIDTEY-RTSLKSYVDYFRHNFVENILLSCVEKRRS 134
>gi|328856178|gb|EGG05300.1| hypothetical protein MELLADRAFT_107513 [Melampsora larici-populina
98AG31]
Length = 213
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 21/177 (11%)
Query: 219 VSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKW 278
VS P+HP + RSY +L+ +F E + + Q+ E+ +L + SE
Sbjct: 23 VSLTHPIHPAIERSYN-ILKVYFREIVFVEQDALKDPEKLSTVLQAL------SESEKLK 75
Query: 279 QENRRSSNSKEDINFFRWEQLKNTLQ--------------SGKQKVQGLRRCVEEIVFAF 324
Q + + + +K +F +WE++ T+ S +++ Q L+ + I
Sbjct: 76 QISEKLTMAKSMTSFAKWEEIHKTVGQEIKNIDRKANSSFSDQRRSQRLKEALINIQLHC 135
Query: 325 TYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLREL 381
TY R+D++VSK+ NHLLK+PFCV+P TG+VC+PIDP FDP VP + +LLR+L
Sbjct: 136 TYRRIDLKVSKNMNHLLKSPFCVNPGTGKVCVPIDPTQIHAFDPEKVPDVRDLLRQL 192
>gi|55847581|gb|AAV67780.1| probable DNA primase small subunit [Aspergillus fumigatus]
Length = 179
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 79/148 (53%), Gaps = 27/148 (18%)
Query: 295 RWEQLKNTLQSGKQKV---QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKT 351
+W + ++GK LR ++IV +TYPRLD EVSK HLLK+PF +HP T
Sbjct: 11 KWADIDALAKTGKSSTLNPTTLRDAKQDIVLEYTYPRLDAEVSKKMIHLLKSPFVIHPGT 70
Query: 352 GRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDN------------------- 392
GRVC+PID K + FDP +VPT+++LL E++ D+ N
Sbjct: 71 GRVCVPIDAKKADGFDPLSVPTVTQLLAEIDAWDAEHSSGNAGAEAGQDESHTPSDSQGS 130
Query: 393 ----EWEKTSLGKSIRFFRSSFLQPLLK 416
++EKTSL I +FR SF+ L K
Sbjct: 131 RKLQDYEKTSLKPYIDYFR-SFIASLNK 157
>gi|67584033|ref|XP_665030.1| small subunit DNA primase [Cryptosporidium hominis TU502]
gi|54655360|gb|EAL34801.1| small subunit DNA primase [Cryptosporidium hominis]
Length = 192
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 243 EKLLLSQNLFSTEERY-EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKN 301
+++L +Q +F + EK+L+ + +++ + W + E W+ L N
Sbjct: 5 DQILENQQIFDHNSIHIEKVLNHLSEDTKVYQTVQNWIQKTSDFTCLE-----FWDFLSN 59
Query: 302 TLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPK 361
TLQ K ++EIVFA++YPRLD+ VSK HLLKAPFC+H TGR+CIPID
Sbjct: 60 TLQKSSDKSH--LTLLKEIVFAYSYPRLDINVSKDLGHLLKAPFCIHHSTGRLCIPIDTS 117
Query: 362 DCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEK----TSLGKSIRFFRSSFLQPLLKS 417
F+P TVPTL+ + + + + D+ + +S+ K I+F +F+ L++
Sbjct: 118 QNFNFNPKTVPTLTSIRNDYDNNICQKDIKSNTTTYTIPSSISKYIQFM-DNFVDNLIQD 176
Query: 418 CKEEME 423
K+E E
Sbjct: 177 TKKEQE 182
>gi|449513649|ref|XP_002194984.2| PREDICTED: DNA primase small subunit-like, partial [Taeniopygia
guttata]
Length = 337
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 117/296 (39%), Gaps = 79/296 (26%)
Query: 166 DFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPL 225
D G H LWVYSGRRGVHCWVCD R+ + R A +Y + KV G
Sbjct: 1 DLGVRHRLWVYSGRRGVHCWVCDDAVRKWSPALRAAAVEYLSLV--------KVGARGAR 52
Query: 226 HPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSS 285
P + LRE + + ++ +W+ R +
Sbjct: 53 SPLPSPEPVQELREPLQAEFPRKKDSLQ-----------------------RWELLRARA 89
Query: 286 NSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPF 345
+ + W + E++ +PRLD+ VSK HLLK+PF
Sbjct: 90 ERERERGRAGWPEW-------------------EVMLQLCFPRLDVNVSKGLGHLLKSPF 130
Query: 346 CVHPKT---------------------GRVCIPIDPKDCEEFDPTTVPTLSELLRELNTG 384
VHPKT GR+ +P+D + ++FDP VPT+S L +EL+
Sbjct: 131 SVHPKTGGTRAKSQAISETRKLDKTNAGRISVPLDLQRLDQFDPFAVPTISSLCQELDAA 190
Query: 385 DSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMES--GYKAKIQQTKNSLS 438
S D E E + + R R P ++C S G++A ++ ++ +
Sbjct: 191 GS----DGEQEDGAETEPKRRTRGGRAWP--RTCGSSSASWRGWRAPAGESGSAAA 240
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 324 FTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
+PRLD+ VSK HLLK+PF VHPKTG
Sbjct: 283 LCFPRLDVNVSKGLGHLLKSPFSVHPKTG 311
>gi|328848859|gb|EGF98054.1| hypothetical protein MELLADRAFT_113881 [Melampsora larici-populina
98AG31]
Length = 214
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 299 LKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVH--PKTGRVCI 356
L N+ S +++ Q L+ + I +TYPR+++EV KH H+LK+PF VH TG+VC+
Sbjct: 81 LSNSSFSDQRRSQRLKEELINIQIHYTYPRINLEVHKHMTHILKSPFWVHLGSSTGKVCV 140
Query: 357 PIDPKDCEEFDPTTVPTLSELLRELN------TGDSRMDVDN-EWEKTSLGKSIRFFRSS 409
PIDP FDP VP + +LLR+L+ TGD + WE+TSL I F
Sbjct: 141 PIDPTQIHAFDPKKVPDVRDLLRQLDKVKFNQTGDGPQQSNKPNWEQTSLKPYIEVFEKH 200
Query: 410 FLQPLLKSCKEEMES 424
+ K KE+++S
Sbjct: 201 ----INKIVKEKLKS 211
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 115 VFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTA 162
F P+ REL+FDID+TDYDD+R CC A +C + W +T+A KV+D +
Sbjct: 35 AFKPILRELVFDIDLTDYDDIRSCCCEARICSKRWKFITIAEKVLDLS 82
>gi|403372871|gb|EJY86344.1| DNA primase [Oxytricha trifallax]
Length = 111
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 8/109 (7%)
Query: 320 IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLR 379
+VF + YPR+D VSK NHLLK+PFCVHPKTG++C+P DP +FD V TL++++
Sbjct: 4 LVFTYLYPRIDANVSKGINHLLKSPFCVHPKTGKICVPFDPNQVFQFDIQNVATLAKVIN 63
Query: 380 ELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMESGYKA 428
++ G SR D + E L +S+ FR SFL+ L EE+ KA
Sbjct: 64 DV--GTSR---DGKIE--CLEESMAVFR-SFLRKLKAENIEEIRQIKKA 104
>gi|429964500|gb|ELA46498.1| hypothetical protein VCUG_01990 [Vavraia culicis 'floridensis']
Length = 304
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 99/246 (40%), Gaps = 62/246 (25%)
Query: 20 YLKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESE 79
YL +Y + FP A ++ RE SF N+ +R+ SF+
Sbjct: 35 YLHTFYRKYFPVALFSRFFGLS-------------AHREVSFMKQNERVIRYLSFDGADA 81
Query: 80 LENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDY------- 132
L +++ ++ P K D+G Y PA +N+F REL+FDID+TDY
Sbjct: 82 LMDALLKEVPLKFDLGSNYVSVPA------MNSNNIFKS--RELVFDIDMTDYMKEMERK 133
Query: 133 -------------------------DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDF 167
DV C +C +C M I ++ L D F
Sbjct: 134 GKTGGNKTKHAEGERGVSSTALRDTSDVHVC---DKLCDDCIAQMNRIIALLKEILTDHF 190
Query: 168 GFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYK--GNENSNKKVSF---- 221
GF H+++ +SG +G HC+V D + R +IA Y + + +EN K V
Sbjct: 191 GFTHVIFFFSGNKGFHCYVMDALTSHFASIVRHSIASYLKKHSVLVDENVTKDVKHLLKA 250
Query: 222 PGPLHP 227
P +HP
Sbjct: 251 PFCVHP 256
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 329 LDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
+D V+K HLLKAPFCVHPK+G VC+P+
Sbjct: 236 VDENVTKDVKHLLKAPFCVHPKSGYVCVPV 265
>gi|183235176|ref|XP_001914165.1| DNA primase small subunit [Entamoeba histolytica HM-1:IMSS]
gi|169800703|gb|EDS89060.1| DNA primase small subunit, putative, partial [Entamoeba histolytica
HM-1:IMSS]
Length = 189
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 80/160 (50%), Gaps = 25/160 (15%)
Query: 221 FPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQE 280
PG H SY ++L F+ K L + + + ER + + +IP TS+
Sbjct: 5 IPG-RHALFDDSY-QILEPLFK-KYLQDEQILESSERRSRFIRLIP----TSK------- 50
Query: 281 NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHL 340
+ KED+ W+ +K L + +Q IVF + YPRLD+ VS RNHL
Sbjct: 51 -QSQCEEKEDLT---WDYVKRILNDDPKALQ-------RIVFTYLYPRLDINVSMKRNHL 99
Query: 341 LKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
LKAPFC+HP TG +C+PI +FD T VPTL + E
Sbjct: 100 LKAPFCIHPATGNICVPIPFNKIIDFDVTRVPTLISVQEE 139
>gi|297851480|ref|XP_002893621.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339463|gb|EFH69880.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 93
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 210 KGNENSNKKVSFPGPLH-PFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDE 268
KGNENS K V G H PFL RS + L+ FFE++L +Q++FS++E+YEKIL MI DE
Sbjct: 15 KGNENSAKNVDLMGHSHQPFLARSCVDFLKNFFEDELHATQSIFSSKEKYEKILGMITDE 74
Query: 269 SVTSELRGKWQENRRSS 285
+ SELRG+W+ + RSS
Sbjct: 75 DIQSELRGEWENSARSS 91
>gi|407033594|gb|EKE36892.1| DNA primase small subunit, putative [Entamoeba nuttalli P19]
Length = 87
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%)
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSEL 377
IVF + YPR+D VS NHLLKAPFC+HP T +VC+PI+ + FDP VPTL L
Sbjct: 2 SIVFTYLYPRIDTNVSVQLNHLLKAPFCIHPSTNKVCVPINFNTIDSFDPNKVPTLQSL 60
>gi|2353692|gb|AAC51726.1| DNA primase 1 [Homo sapiens]
Length = 50
Score = 78.2 bits (191), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTAL 163
F E+EL+FDID+TDYDDVR CCS AD+C +CW LMT+AI++ID AL
Sbjct: 3 FQAQEKELVFDIDMTDYDDVRRCCSSADICPKCWTLMTMAIRIIDRAL 50
>gi|328853441|gb|EGG02580.1| hypothetical protein MELLADRAFT_91279 [Melampsora larici-populina
98AG31]
Length = 105
Score = 75.9 bits (185), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 10/72 (13%)
Query: 162 ALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSF 221
+LR+DFGF H+ WV SGRRG+HCWV DG+A +LT+EQR I ++ + +G
Sbjct: 15 SLREDFGFQHLSWVCSGRRGIHCWVSDGEALKLTDEQRKGIVNFLDILRGG--------- 65
Query: 222 PGPLHPFLVRSY 233
G H F+ +Y
Sbjct: 66 -GSRHAFMPATY 76
>gi|312136828|ref|YP_004004165.1| DNA primase, small subunit [Methanothermus fervidus DSM 2088]
gi|311224547|gb|ADP77403.1| DNA primase, small subunit [Methanothermus fervidus DSM 2088]
Length = 297
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 55/313 (17%)
Query: 57 REFSFTLDND-IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
REF+F D R++SF ++ +LE IK + P I + P KR +
Sbjct: 34 REFAFDHDGSGPSDRYRSFKNKRKLEKFIKIRAPYAIYSSVAFYEKPHKREGWKGA---- 89
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWV 175
EL+FDID D + C A C C +K+I++ LR+DFG + I +
Sbjct: 90 ------ELVFDIDAKDLPIKKCKCKNA--CEICLEQAKDIVKIINSILRNDFGLEKIHII 141
Query: 176 YSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTE 235
YSG RG H V D L +E R I Y G ++ V F P+ Y +
Sbjct: 142 YSG-RGYHIRVLDKDVLELDSEVRREILKYV---VGWDDPGSDVFFTIPI------GYPK 191
Query: 236 VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
V ++ + +F + K+ E ++ K ++NR
Sbjct: 192 VFTKWM-------KYIFLNIDENSKV------EGISRYTLRKIRKNR------------- 225
Query: 296 WEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
E++K + GK ++ L+R ++ I +D +V+ N +L+ P VH K G VC
Sbjct: 226 -EKIKKN-EFGKLRIN-LKRLIDPIR-NINSKLVDTKVTIDVNRILRLPGSVHSKVGAVC 281
Query: 356 IPIDPKDCEEFDP 368
++ D +F+P
Sbjct: 282 TEVNSLD--DFNP 292
>gi|392896162|ref|NP_001255016.1| Protein PRI-1, isoform b [Caenorhabditis elegans]
gi|345109015|emb|CCD31084.1| Protein PRI-1, isoform b [Caenorhabditis elegans]
Length = 117
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 321 VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRE 380
V YPRLD+ VS NHLLK+PFC+HPKTG V +P++ EEFD + P + ++ E
Sbjct: 13 VLQRCYPRLDVNVSTGTNHLLKSPFCIHPKTGNVAVPLNVGKIEEFDVSKCPRIDHVVEE 72
Query: 381 LNT 383
L++
Sbjct: 73 LSS 75
>gi|149605755|ref|XP_001520432.1| PREDICTED: retinol dehydrogenase 16-like, partial [Ornithorhynchus
anatinus]
Length = 192
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 39 SYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVY 98
SYG D + +K YF REFSFTL +D+Y+R+QSF++++ELE +++ P KID+G VY
Sbjct: 131 SYG-DVYMESLEKRYFQHREFSFTLKDDVYIRYQSFSTQAELEKEMQKLSPYKIDVGAVY 189
Query: 99 S 99
S
Sbjct: 190 S 190
>gi|440493665|gb|ELQ76106.1| Eukaryotic-type DNA primase, catalytic (small) subunit
[Trachipleistophora hominis]
Length = 177
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 129 ITDYD--DVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
+T YD DV C ++C EC M I ++ L D+FGF H+++ +SG +G HC+V
Sbjct: 30 VTQYDLNDVHVC---DNLCNECIAQMNKLIDLLKKILTDNFGFSHVIFFFSGNKGFHCYV 86
Query: 187 CDGKARRLTNEQRGAIADYFR 207
D AR T R ++A Y +
Sbjct: 87 TDASARHFTGIVRQSVASYLK 107
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 329 LDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
+D V++ HLLKAPFCVHPK+G VC+P+
Sbjct: 113 VDENVTRDVKHLLKAPFCVHPKSGYVCVPV 142
>gi|67583585|ref|XP_665001.1| DNA primase small subunit [Cryptosporidium hominis TU502]
gi|54655294|gb|EAL34771.1| DNA primase small subunit [Cryptosporidium hominis]
Length = 79
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 65 NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELI 124
++IYLR+Q F + +L+ I + P K DIG +Y++ +++ G F PV+REL+
Sbjct: 10 DEIYLRWQHFKTIDQLKQEIVARTPHKFDIGAIYNIPISEKEISPLG----FKPVQRELV 65
Query: 125 FDIDITDYDDVR 136
FDID+ DYDD++
Sbjct: 66 FDIDMNDYDDIQ 77
>gi|255513592|gb|EET89858.1| DNA primase, small subunit [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 131/351 (37%), Gaps = 74/351 (21%)
Query: 46 HP-ACDKSYFGRREFSFT-LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPA 103
HP A DK REF F + I R +F S ++L I E P I + PA
Sbjct: 20 HPIAVDK--VANREFGFGDFERKIKYRHYAFGSNADLNKFIVENVPPFISCSSSFYEYPA 77
Query: 104 KRHAYAQGGDNVFAPVER------ELIFDIDITDYDDVRYCCSGAD-VCLECWP-LMTVA 155
R P+E+ E++FD+D TD G VC EC + A
Sbjct: 78 AR------------PMEKKVWKGSEMVFDLDATDLKLPCQQVHGTSWVCSECLSGIKAEA 125
Query: 156 IKVIDTALRDDFGFD----HILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKG 211
IK+I+ L DFGF+ HI +SG RG H V D + L + +R I+DY
Sbjct: 126 IKLIEDFLVPDFGFEEKRLHI--NFSGNRGYHIRVADERVISLNSAERKQISDYITGNGI 183
Query: 212 N------ENSNKKVSFPGPLHPF-------LVRSYTEVLREFFEEKLLLSQNLFSTEERY 258
N S + GP P + R L + E LL E++
Sbjct: 184 NALSFFPSISERGAQLRGP-RPTDGGWGGRIARGTINALNKGAGELALL-----GIEKKE 237
Query: 259 EKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE 318
++L + + G W + + S S QL L G QG
Sbjct: 238 ARLLEKHRADIILGISVGNWDKVKISKKS----------QLWANLIKGMTVRQG------ 281
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDP-KDCEEFDP 368
+D V+ +HLL+ P +H TG V I+ K EF+P
Sbjct: 282 --------DSIDKNVTDDTHHLLRVPDTLHGDTGLVSKTINSLKGLSEFEP 324
>gi|222480210|ref|YP_002566447.1| DNA primase small subunit [Halorubrum lacusprofundi ATCC 49239]
gi|254782820|sp|B9LPT9.1|PRIS_HALLT RecName: Full=Probable DNA primase small subunit
gi|222453112|gb|ACM57377.1| DNA primase, small subunit [Halorubrum lacusprofundi ATCC 49239]
Length = 387
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 119/310 (38%), Gaps = 64/310 (20%)
Query: 90 SKIDIGPV--YSVDPAKRHAYAQGG--DNVFAPV-------ERELIFDIDITDYDDVRY- 137
S D+G V + D A RHAY D+ A +L+FD+D V
Sbjct: 51 SLYDLGDVDTFFADNAPRHAYFSAARYDDPGASTMSQKGWRSADLVFDLDADHLPGVDPD 110
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
S ++ EC + ++++D L DDF FD + V+SG RG H V D R L +E
Sbjct: 111 ATSYPEMLAECKQAL---LRLLDF-LEDDFSFDDLTVVFSGGRGYHVHVRDESVRELDSE 166
Query: 198 QRGAIADYFRVYK----------GNENSNKKV-----SFPGPLHPFLVRSYTEVLREF-- 240
R + DY R + K+V + +H L+ Y + LRE
Sbjct: 167 ARREVVDYVRAIDLDTEGLIRTVSERGTTKRVLRTEGGWGARVHEALI-EYADDLREMDA 225
Query: 241 --FEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQ 298
E+L+ + E R E IL +R + +E
Sbjct: 226 EDARERLMELDGI--GEGRAETILGAF---------------DRNPTAVRE--------- 259
Query: 299 LKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
+++G V+ L + V A +D V+ L++ P +H +G V PI
Sbjct: 260 --GNVEAGGPGVRRLVSALAARVTATDTAPIDEPVTTDTRRLIRLPRTLHGGSGLVVTPI 317
Query: 359 DPKDCEEFDP 368
D D + FDP
Sbjct: 318 DRDDLDAFDP 327
>gi|48477874|ref|YP_023580.1| DNA primase small subunit [Picrophilus torridus DSM 9790]
gi|62287054|sp|Q6L0W5.1|PRIS_PICTO RecName: Full=Probable DNA primase small subunit
gi|48430522|gb|AAT43387.1| DNA primase small subunit [Picrophilus torridus DSM 9790]
Length = 370
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 128/326 (39%), Gaps = 40/326 (12%)
Query: 55 GRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
+RE + + +R SF + E+E+ +K P + Y + P ++ + +
Sbjct: 27 SKREIGYIPFSGTMIRHLSFRNHREIESFVKRNTPRHLYYSSAYYIKPDEKRMEKKIWEG 86
Query: 115 VFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKV--IDTALRDDFGFD-- 170
ELIFD+D G+D L+ V V + L +DFGFD
Sbjct: 87 A------ELIFDLDAD-------HIPGSDKMTYEEILLEVKKHVSRLLNYLINDFGFDDD 133
Query: 171 HILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLV 230
I +SG RG H V + L ++ R I +Y ++ ++ + S P L
Sbjct: 134 SIKLYFSGGRGYHVHVVSDRVYSLDSDARREIGNYIKMEDFTIDNIIRASREKPESGPLK 193
Query: 231 RSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKED 290
R + E + E + ++ L + +RY K L + D ++ + + SK D
Sbjct: 194 R-FNEYISEIYSDENYLKRFYNGDFDRYYKSLDVYKDGKKKIDIMRENNYEKFKIVSKRD 252
Query: 291 INFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
++ L N L K K +D V+ + L++ P +H K
Sbjct: 253 LDV-----LNNILNDFKDKYSA---------------EIDEPVTTDVHRLIRFPGSLHGK 292
Query: 351 TGRVCIPIDPKDCEEFDP--TTVPTL 374
TG P++ + + FDP + VP +
Sbjct: 293 TGLAVTPVNINEFDNFDPLISAVPEV 318
>gi|448611870|ref|ZP_21662300.1| DNA primase small subunit [Haloferax mucosum ATCC BAA-1512]
gi|445742631|gb|ELZ94125.1| DNA primase small subunit [Haloferax mucosum ATCC BAA-1512]
Length = 387
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 119/305 (39%), Gaps = 29/305 (9%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R QS EL + + P + DP +G E +L+FDID
Sbjct: 47 RHQSLLDLGELSDYLARSAPRHVYFSSARFADPGAATMDDKGW------READLVFDIDA 100
Query: 130 TDYDDVRYCCSG-ADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
D+ +G AD+ + + +++T DF FD + V+SG RG H V D
Sbjct: 101 DHLPDIDPEATGYADMLEAGKQALLDLLDLLETDF--DFDFDEMQAVFSGGRGYHVHVRD 158
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
R L +E R + DY R + ++ + G ++R+ R L
Sbjct: 159 ESVRGLDSEARREVVDYIRAIDLDFDALIETRQHGTTTQRVLRTEGGWGRRTHRRLLDFV 218
Query: 249 QNLFSTEERYE----KILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQ 304
L EE K L I D + L G +Q N + + ++
Sbjct: 219 DGLLEMEEDAALERLKELDGIGDGRAKTIL-GAFQNNPDAIR-------------EGNVE 264
Query: 305 SGKQKVQGLRRCV-EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDC 363
+G V+ L + +E V A T P +D V+ L++ P +H +G V P+D +
Sbjct: 265 AGGPGVRTLVEALAQETVEAETSP-IDEPVTTDTKRLIRLPKSLHGGSGLVVEPLDRDEI 323
Query: 364 EEFDP 368
++FDP
Sbjct: 324 DDFDP 328
>gi|385804097|ref|YP_005840497.1| DNA primase small subunit [Haloquadratum walsbyi C23]
gi|339729589|emb|CCC40859.1| DNA primase small subunit [Haloquadratum walsbyi C23]
Length = 385
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 125/328 (38%), Gaps = 33/328 (10%)
Query: 47 PACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRH 106
PA ++ +G +++ + +R QS L++ + P I DP
Sbjct: 26 PAANRREWG--HIPWSVGSTTMVRHQSLLELGTLDDFLHRTAPKHIYFSAARFNDPGATT 83
Query: 107 AYAQGGDNVFAPVERELIFDIDITDYDDVR-YCCSGADVCLECWPLMTVAIKVIDTALRD 165
+ + +LIFD+D V S AD+ C + ++ ID D
Sbjct: 84 MDQKDWQSA------DLIFDLDADHLPGVNPDTTSYADMLTACKTELQTLLEFID----D 133
Query: 166 DFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGN-ENSNKKVSFPGP 224
DF FD V+SG RG H V D + R L + R I DY R N E + S G
Sbjct: 134 DFNFDETQVVFSGGRGYHVHVRDEQVRSLDSAARREIVDYIRAIDLNIETLIETQSNHGT 193
Query: 225 LHPFLVR--SYTEVLREFFEEKLLLSQNLFSTE--ERYEKILSMIPDESVTSELRGKWQE 280
L + + + + E + Q TE ER + + + T + G+ Q
Sbjct: 194 TQRILKHRGGWGQRIHKRLIELIDTLQASDDTEALERLQSFEGIGTGRAET--ILGQIQN 251
Query: 281 NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHL 340
N + ++ L++G ++ L + + F +D V+ N L
Sbjct: 252 NPEAIHA-------------GNLEAGGAGIRILADALAQTAFEAETAPIDEPVTTDTNRL 298
Query: 341 LKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
++ P +H +G + P+D ++ F P
Sbjct: 299 IRLPGSLHGGSGLLVTPLDREEIPSFHP 326
>gi|110668621|ref|YP_658432.1| DNA primase small subunit [Haloquadratum walsbyi DSM 16790]
gi|121687206|sp|Q18GR9.1|PRIS_HALWD RecName: Full=Probable DNA primase small subunit
gi|109626368|emb|CAJ52827.1| DNA primase small subunit [Haloquadratum walsbyi DSM 16790]
Length = 385
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 25/253 (9%)
Query: 122 ELIFDIDITDYDDVR-YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
+LIFD+D V S AD+ C + ++ ID DDF FD V+SG R
Sbjct: 93 DLIFDLDADHLPGVNPDTTSYADMLTACKTELQTLLEFID----DDFNFDETQVVFSGGR 148
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGN-ENSNKKVSFPGPLHPFLVR--SYTEVL 237
G H V D + R L + R I DY R N E + S G L + + +
Sbjct: 149 GYHVHVRDEQVRSLDSAARREIVDYIRAIDLNIETLIETQSNHGTTQRILKHRGGWGQRI 208
Query: 238 REFFEEKLLLSQNLFSTE--ERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
+ E + Q TE ER + + + T + G+ Q N + ++
Sbjct: 209 HKRLVELIETLQASDDTEALERLQSFEGIGTGRAET--ILGQIQNNPEAIHA-------- 258
Query: 296 WEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
L++G ++ L + + F +D V+ N L++ P +H +G +
Sbjct: 259 -----GNLEAGGAGIRILADALAQTAFEAETAPIDEPVTTDTNRLIRLPGSLHGGSGLLV 313
Query: 356 IPIDPKDCEEFDP 368
P+D ++ F P
Sbjct: 314 TPLDREEIPSFHP 326
>gi|70937185|ref|XP_739433.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516431|emb|CAH80616.1| hypothetical protein PC000127.04.0 [Plasmodium chabaudi chabaudi]
Length = 125
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 21 LKVYYGRLFPHADIFKWMSYGND--GRHPAC-DKSYFGRREFSFTLDN------DIYLRF 71
L YY L P D+ W++Y ND G++ D ++F +REFSFT +IY+R+
Sbjct: 19 LIFYYRNLCPITDLCNWLNYKNDNNGKYTRLNDPNFFSKREFSFTCKKSDQGKEEIYMRW 78
Query: 72 QSFNSESELENSIKEK-CPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVER 121
SFNS +E ++ + P K DIG VY+ +++ Q GD +F P+++
Sbjct: 79 LSFNSANEFKDKLLSNFVPIKFDIGAVYNYPVSQKD---QKGD-LFRPIQK 125
>gi|55377204|ref|YP_135054.1| DNA primase small subunit [Haloarcula marismortui ATCC 43049]
gi|62287014|sp|Q5V554.1|PRIS_HALMA RecName: Full=Probable DNA primase small subunit
gi|55229929|gb|AAV45348.1| eukaryotic-type DNA primase small subunit [Haloarcula marismortui
ATCC 43049]
Length = 392
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 97/260 (37%), Gaps = 23/260 (8%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A++ + L DDFGFD + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVVLGEDSYAEMLAKCKDALRRLLDFLEDDFGFDDLTIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYK-------GNENSNKKVSFPGPLHPFLVRSYT 234
H V D + R L + R + DY R E+ P + +
Sbjct: 151 YHVHVRDERIRHLERDARREVVDYVRGIGLEFDELVDEESVAGTAGRSSPAQKRTLSTEG 210
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
L + +L + EE L + + E + N SN
Sbjct: 211 GWSARAHRHMLAVVDDLLAMEE--ADALEQLQEYDGIGEGKATAALNAARSN-------- 260
Query: 295 RWEQLK-NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+EQL+ + Q + + E+V A P +D V+ N L++ P +H +G
Sbjct: 261 -YEQLEAGNIDVHPAFYQLAKILLHEVVAADNAP-IDEPVTTDTNRLIRLPGSLHGGSGL 318
Query: 354 VCIPIDPKDCEEFDPTTVPT 373
ID D + FDP P
Sbjct: 319 EVQRIDRDDLDAFDPLVDPV 338
>gi|448592561|ref|ZP_21651668.1| DNA primase small subunit [Haloferax elongans ATCC BAA-1513]
gi|445731566|gb|ELZ83150.1| DNA primase small subunit [Haloferax elongans ATCC BAA-1513]
Length = 385
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 118/311 (37%), Gaps = 43/311 (13%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R QS EL++ + P + DP +G +L+FDID
Sbjct: 47 RHQSLLDLGELDDYLTRSAPRHVYFSSARFSDPGASSMDEKGWRGA------DLVFDIDA 100
Query: 130 -----TDYDDVRYCCS---GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
D D+ Y G + L+ L L DF FD + V+SG RG
Sbjct: 101 DHLPGVDPDETNYADMLEFGKEALLDLVDL-----------LERDFDFDEMQVVFSGGRG 149
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H V D R+L ++ R I DY R + + G ++R+ R
Sbjct: 150 YHVHVRDDSVRQLDSDARREIVDYIRAIDLDVEGLIETRQYGTTTRRVLRTEGGWGRRTH 209
Query: 242 EEKLLLSQNLFSTEE--RYEKILSMIP-DESVTSELRGKWQENRRSSNSKEDINFFRWEQ 298
+ L + L EE E+++ + E + G +Q N S + D N
Sbjct: 210 QRLLDFADGLMEMEEDAALERLMELDGIGEGRAKTILGTFQNN---SEAIRDGN------ 260
Query: 299 LKNTLQSGKQKVQGLRRCV-EEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIP 357
+++G V+ L + E V T P +D V+ L++ P +H +G V P
Sbjct: 261 ----VEAGGPGVRTLVEALAHETVEDETSP-IDEPVTTDTKRLIRLPKSLHGGSGLVVQP 315
Query: 358 IDPKDCEEFDP 368
+D + ++FDP
Sbjct: 316 LDRDEIDDFDP 326
>gi|448426298|ref|ZP_21583244.1| DNA primase small subunit [Halorubrum terrestre JCM 10247]
gi|448484614|ref|ZP_21606162.1| DNA primase small subunit [Halorubrum arcis JCM 13916]
gi|445679789|gb|ELZ32249.1| DNA primase small subunit [Halorubrum terrestre JCM 10247]
gi|445819822|gb|EMA69657.1| DNA primase small subunit [Halorubrum arcis JCM 13916]
Length = 387
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 128/347 (36%), Gaps = 72/347 (20%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPV--YSVDPAKRHAYAQGG-- 112
R S +L D LR + + + S D+G V + D A RHAY
Sbjct: 18 RSVSLSLPPDANLREWGHIPWTPGSGTTMVRHQSLFDLGDVDTFFADNAPRHAYFSAARY 77
Query: 113 DNVFAPV-------ERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALR- 164
DN A +L+FD+D G D +P M A K D LR
Sbjct: 78 DNPGAATMGQKGWRNADLVFDLDAD-------HLPGVDPETTSYPEMLAACK--DALLRL 128
Query: 165 -----DDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYK--------- 210
DDF F+ + V+SG RG H V D R L ++ R I DY R
Sbjct: 129 LDFIDDDFAFEDVTVVFSGGRGYHVHVRDESVRELDSDARREIVDYVRAIDLDTDDLIRT 188
Query: 211 -GNENSNKKV-----SFPGPLHPFLVRSYTEVLREFFEE---KLLLSQNLFSTEERYEKI 261
+ + K+V + +H LV +Y + LRE E+ K L+ + E R E I
Sbjct: 189 VSDRGTTKRVLRTEGGWGARVHEELV-NYADNLREMDEDDARKELMELDGIG-EGRAETI 246
Query: 262 LSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIV 321
L +R + +E +++G V+ L + V
Sbjct: 247 LGAF---------------DRNPTAVRE-----------GNVEAGGPGVRRLVSALAARV 280
Query: 322 FAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
A +D V+ L++ P +H + V P+D + +FDP
Sbjct: 281 AATDAAPIDEPVTTDTRRLIRLPGTLHGGSALVVTPLDRDELADFDP 327
>gi|448640522|ref|ZP_21677425.1| DNA primase small subunit [Haloarcula sinaiiensis ATCC 33800]
gi|448651452|ref|ZP_21680521.1| DNA primase small subunit [Haloarcula californiae ATCC 33799]
gi|445761832|gb|EMA13071.1| DNA primase small subunit [Haloarcula sinaiiensis ATCC 33800]
gi|445770979|gb|EMA22037.1| DNA primase small subunit [Haloarcula californiae ATCC 33799]
Length = 392
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 97/260 (37%), Gaps = 23/260 (8%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A++ + L DDFGFD + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVVLGEDSYAEMLAKCKDALRRLLDFLEDDFGFDDLTIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYK-------GNENSNKKVSFPGPLHPFLVRSYT 234
H V D + R L + R + DY R E+ P + +
Sbjct: 151 YHVHVRDERIRHLERDARREVVDYVRGIGLEFDELVDEESVAGTAGRSSPAQKRTLSTEG 210
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
L + +L + EE L + + E + N SN
Sbjct: 211 GWSARAHRHMLAVVDDLLAMEE--ADALDRLQEYDGIGEGKATAALNAARSN-------- 260
Query: 295 RWEQLK-NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+EQL+ + Q + + E+V A P +D V+ N L++ P +H +G
Sbjct: 261 -YEQLEAGNIDVHPAFYQLAKILLHEVVAADNAP-IDEPVTTDTNRLIRLPGSLHGGSGL 318
Query: 354 VCIPIDPKDCEEFDPTTVPT 373
ID D + FDP P
Sbjct: 319 EVQRIDRDDLDAFDPLVDPV 338
>gi|307596163|ref|YP_003902480.1| DNA primase small subunit [Vulcanisaeta distributa DSM 14429]
gi|307551364|gb|ADN51429.1| DNA primase, small subunit [Vulcanisaeta distributa DSM 14429]
Length = 347
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 56 RREFSFTL-DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
RREF F D + +R +F S EL+ + PS + DPA A+G
Sbjct: 29 RREFGFQFFDKEGMIRHMAFKSSDELKRYLVSNVPSHVYYSSALYNDPANPDMDAKGW-- 86
Query: 115 VFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFD--HI 172
+ +LIFDID D+ + C + L+C T + + L +DFGF I
Sbjct: 87 ----LGADLIFDID-GDHLPTQNCQGVELMTLDCLSDATEEVNKLIDFLIEDFGFSDSSI 141
Query: 173 LWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF--------RVYKGN 212
+SG RG H + R LT+E+R + DY R+ +GN
Sbjct: 142 KIFFSGHRGYHVHIELPDVRGLTDEERREVIDYLLLRGFDIERLIRGN 189
>gi|375084309|ref|ZP_09731314.1| DNA primase small subunit [Thermococcus litoralis DSM 5473]
gi|374740945|gb|EHR77378.1| DNA primase small subunit [Thermococcus litoralis DSM 5473]
Length = 344
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R F +LE+ +K P I DP N+ + EL+FDID
Sbjct: 51 RKNVFQDVKDLEDYVKITAPYSIYSSVALYSDPK----------NMSGWLGAELVFDIDA 100
Query: 130 TDYDDVRYCCSGAD----VCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCW 185
D ++ C A +CLE + VI LR+DFGF++I VYSG RG H
Sbjct: 101 KDLP-LKMCSHEAGTVCPICLEDAKELARDTLVI---LREDFGFENIHVVYSG-RGYHIR 155
Query: 186 VCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKL 245
V D A L ++ R I Y +S ++++F + E K+
Sbjct: 156 VLDDWALELDSKARERILSYI-------SSAEEITF----------------EDIQERKI 192
Query: 246 LLSQNLFST-EERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQ 304
LLS + R+ + I + + + K Q + N E F + L
Sbjct: 193 LLSSGYYRVFRLRFGYFIKRISEYHLRNIGLNKKQISMIMENRDEIYENFARKALLTAFP 252
Query: 305 SGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID--PKD 362
G LR F+ Y D V+ +L+ P +H K G + I KD
Sbjct: 253 QGVGYKTLLRLFSLSTTFSKAY--FDGRVTVDVKRILRLPSSLHSKVGLIATYIGNREKD 310
Query: 363 CEEFDP--TTVPTLSE 376
E FDP VP E
Sbjct: 311 LESFDPFKNAVPKFRE 326
>gi|11498348|ref|NP_069576.1| DNA primase [Archaeoglobus fulgidus DSM 4304]
gi|2649873|gb|AAB90500.1| DNA primase, putative [Archaeoglobus fulgidus DSM 4304]
Length = 360
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 121/319 (37%), Gaps = 69/319 (21%)
Query: 54 FGRREFSFT----LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYA 109
F REF+F L + + R SF SE++ I P+ I Y PA+
Sbjct: 51 FKNREFAFVPLELLPDFVMHRHISFRSETDFRAYILSNVPAHIYFSSAYYERPAEDKMEN 110
Query: 110 QGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF 169
+G + +LIFDID D+ V+ A + + IK + LR DFG
Sbjct: 111 KGW------LGADLIFDID-ADHLPVK-----AQSFEKALEMAKREIKKLTAVLRADFGI 158
Query: 170 DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFL 229
+ +SG RG H V D + L + +R I DY R+ NS K V +
Sbjct: 159 RDMKIYFSGGRGYHVHVHDEEFLSLGSAERREIVDYLRL-----NSPKIVVEDRFANSNA 213
Query: 230 VRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKE 289
+ LR+ EE DE +TS+L+ K + ++ +K+
Sbjct: 214 AKRVLNYLRKKLEE-----------------------DERLTSKLKIKPADLKKEKLTKK 250
Query: 290 DINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHP 349
I R VE+ ++ +D V+ L++ P +H
Sbjct: 251 VI-----------------------RAVEKFDYSALSIYIDAPVTADVKRLIRLPGSLHG 287
Query: 350 KTGRVCIPIDPKDCEEFDP 368
KTG ++ D E F+P
Sbjct: 288 KTGLRVTEVE--DIESFNP 304
>gi|448378214|ref|ZP_21560688.1| DNA primase small subunit [Halovivax asiaticus JCM 14624]
gi|445654196|gb|ELZ07050.1| DNA primase small subunit [Halovivax asiaticus JCM 14624]
Length = 394
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 99/254 (38%), Gaps = 22/254 (8%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A++ + L DDFGF+++ V+SG RG
Sbjct: 94 DLVFDLDA---DHLPGVTLGEDSYAEMLATCKDALRRLLDFLEDDFGFENMEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H V D + R L E R I DY R + F H + + RE
Sbjct: 151 YHVHVRDERIRHLEREHRREIVDYVR--------GIGLEFD---HLIETETVAGMGRETP 199
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELRG--KWQENRRSSNSKEDINFFRWEQL 299
E+ +L + E +++ +S + D E + Q K
Sbjct: 200 TERRILRTSGGWGERLHDRFVSFLDDLLAMDEEAALERLQSFDGIGEGKATAALNAATNN 259
Query: 300 KNTLQSGKQKV-----QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
+ +++G V Q +R E V A P +D V+ N L++ P +H +
Sbjct: 260 RAAIEAGNVTVHTAIAQLAQRFAERTVEAENAP-IDEPVTTDTNRLIRLPGSLHGGSSLA 318
Query: 355 CIPIDPKDCEEFDP 368
ID D +FDP
Sbjct: 319 VRRIDRADLTDFDP 332
>gi|34395917|sp|O29516.2|PRIS_ARCFU RecName: Full=Probable DNA primase small subunit
Length = 335
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 120/319 (37%), Gaps = 69/319 (21%)
Query: 54 FGRREFSFT----LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYA 109
F REF+F L + + R SF SE++ I P+ I Y PA+
Sbjct: 26 FKNREFAFVPLELLPDFVMHRHISFRSETDFRAYILSNVPAHIYFSSAYYERPAEDKMEN 85
Query: 110 QGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF 169
+G + +LIFDID D + + LE + IK + LR DFG
Sbjct: 86 KGW------LGADLIFDIDA---DHLPVKAQSFEKALE---MAKREIKKLTAVLRADFGI 133
Query: 170 DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFL 229
+ +SG RG H V D + L + +R I DY R+ NS K V +
Sbjct: 134 RDMKIYFSGGRGYHVHVHDEEFLSLGSAERREIVDYLRL-----NSPKIVVEDRFANSNA 188
Query: 230 VRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKE 289
+ LR+ EE DE +TS+L+ K + ++ +K+
Sbjct: 189 AKRVLNYLRKKLEE-----------------------DERLTSKLKIKPADLKKEKLTKK 225
Query: 290 DINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHP 349
I R VE+ ++ +D V+ L++ P +H
Sbjct: 226 VI-----------------------RAVEKFDYSALSIYIDAPVTADVKRLIRLPGSLHG 262
Query: 350 KTGRVCIPIDPKDCEEFDP 368
KTG ++ D E F+P
Sbjct: 263 KTGLRVTEVE--DIESFNP 279
>gi|304314726|ref|YP_003849873.1| DNA primase, small subunit [Methanothermobacter marburgensis str.
Marburg]
gi|302588185|gb|ADL58560.1| DNA primase, small subunit [Methanothermobacter marburgensis str.
Marburg]
Length = 355
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 118/306 (38%), Gaps = 43/306 (14%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R++ F+ E L ++ + P + +P KR + + ELIFD+D
Sbjct: 82 RYRVFDDEKRLSRFMRARFPFAAYSSVAFYREPGKRRGWQRS----------ELIFDVDA 131
Query: 130 TDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
D VR C C G VC C + ++ LR D G + VYSG RG H V D
Sbjct: 132 KDLP-VRSCDCEG--VCERCLDEAKELVLMMVDTLRGDLGLGDVHVVYSG-RGYHIRVLD 187
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
L +E R A+ R G +K + G SY E + L
Sbjct: 188 PGVMELGSEVR---AEILRYTAGARQPRRKFTHRG-------ESY-----EMEHFSIPLG 232
Query: 249 QNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQ 308
+ TE L M DE + + +E ++ + D RW + + + G +
Sbjct: 233 YHRVFTERAKHVFLHMRGDERIENVTARTVREVVKNRDLLPDD---RWGEFRRRI--GPR 287
Query: 309 KVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
L V I +D +V+ +L+ P +H K +C+ + K+ E FDP
Sbjct: 288 VYPRLVAGVAGINMKM----VDAKVTIDLKRILRLPTSLHSKVSMICMEV--KNPETFDP 341
Query: 369 --TTVP 372
+ VP
Sbjct: 342 LKSAVP 347
>gi|448452299|ref|ZP_21593260.1| DNA primase small subunit [Halorubrum litoreum JCM 13561]
gi|448508348|ref|ZP_21615454.1| DNA primase small subunit [Halorubrum distributum JCM 9100]
gi|448518277|ref|ZP_21617389.1| DNA primase small subunit [Halorubrum distributum JCM 10118]
gi|445697414|gb|ELZ49478.1| DNA primase small subunit [Halorubrum distributum JCM 9100]
gi|445705389|gb|ELZ57287.1| DNA primase small subunit [Halorubrum distributum JCM 10118]
gi|445809363|gb|EMA59407.1| DNA primase small subunit [Halorubrum litoreum JCM 13561]
Length = 387
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 128/347 (36%), Gaps = 72/347 (20%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPV--YSVDPAKRHAYAQGG-- 112
R S +L D LR + + + S D+G V + D A RHAY
Sbjct: 18 RSVSLSLPPDANLREWGHIPWTPGSGTTMVRHQSLFDLGDVDTFFADNAPRHAYFSAARY 77
Query: 113 DNVFAPV-------ERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALR- 164
DN A +L+FD+D G D +P M A K D LR
Sbjct: 78 DNPGAATMGQKGWRNADLVFDLDAD-------HLPGVDPETTSYPEMLAACK--DALLRL 128
Query: 165 -----DDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYK--------- 210
DDF F+ + V+SG RG H V D R L ++ R I DY R
Sbjct: 129 LDFIDDDFAFEDVTVVFSGGRGYHVHVRDESVRELDSDARREIVDYVRAIDLDTDDLIRT 188
Query: 211 -GNENSNKKV-----SFPGPLHPFLVRSYTEVLREFFEE---KLLLSQNLFSTEERYEKI 261
+ + K+V + +H LV +Y + LRE E+ K L+ + E R + I
Sbjct: 189 VSDRGTTKRVLRTEGGWGARVHEELV-NYADNLREMDEDDARKELMELDGIG-EGRAQTI 246
Query: 262 LSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIV 321
L +R + +E +++G V+ L + V
Sbjct: 247 LGAF---------------DRNPTAVRE-----------GNVEAGGPGVRRLVSALAARV 280
Query: 322 FAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
A +D V+ L++ P +H + V P+D + +FDP
Sbjct: 281 AATDAAPIDEPVTTDTRRLIRLPGTLHGGSALVVTPLDRDELADFDP 327
>gi|84488915|ref|YP_447147.1| DNA primase small subunit [Methanosphaera stadtmanae DSM 3091]
gi|121717355|sp|Q2NI23.1|PRIS_METST RecName: Full=Probable DNA primase small subunit
gi|84372234|gb|ABC56504.1| DNA primase, small subunit [Methanosphaera stadtmanae DSM 3091]
Length = 324
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 127/314 (40%), Gaps = 66/314 (21%)
Query: 57 REFSFT-LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
REF F N R++ F + L+ IK K P + P +R + +
Sbjct: 37 REFGFDHYGNGPNDRYKVFVDDLRLKRFIKVKQPFAAYCSVAFYDKPNQRKGWQKS---- 92
Query: 116 FAPVERELIFDIDITDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILW 174
EL+FD+D D +R C C+ +VC +C + +I L DFG +I
Sbjct: 93 ------ELVFDVDAKDI-PIRTCDCAEGEVCEKCLNQAKEIVLMIRDVLSGDFGLTNINL 145
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLV---- 230
+YSG RG H V D ++E RG I Y K + SN + F L PF++
Sbjct: 146 IYSG-RGYHVRVLDEDVMDASSELRGDIIQYVTGSKLPDLSN-EYGF-NDLQPFIIPFGY 202
Query: 231 -RSYT---------------------EVLREFFEEKLLLSQNLFSTEE------RYEKIL 262
+++T ++LR+ + + LL ++L+ RY+K++
Sbjct: 203 PKNFTRWSKYTILHLRRSSKLDDVNNQLLRDVLKHRNLLQEDLWGMFRSNIGPIRYKKVM 262
Query: 263 SMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE---- 318
+ I + N + +++K I+ R +L +TL S L + +E
Sbjct: 263 NAIS------------RINMQITDTKVSIDLKRILRLPSTLHSKVSMKSTLIKNIETFDP 310
Query: 319 --EIVFAFTYPRLD 330
+ V F Y R D
Sbjct: 311 FDDAVPKFVYERND 324
>gi|433638736|ref|YP_007284496.1| DNA primase, eukaryotic-type, small subunit, putative [Halovivax
ruber XH-70]
gi|433290540|gb|AGB16363.1| DNA primase, eukaryotic-type, small subunit, putative [Halovivax
ruber XH-70]
Length = 394
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 98/254 (38%), Gaps = 22/254 (8%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A++ + L DDFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPGVTLGEDSYAEMLATCKDALRRLLDFLEDDFGFEDMEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H V D + R L E R I DY R + F H + + RE
Sbjct: 151 YHVHVRDERIRHLEREHRREIVDYVR--------GIGLEFD---HLIETETVAGMGRETP 199
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELRG--KWQENRRSSNSKEDINFFRWEQL 299
E+ +L + E +++ +S + D E + Q K
Sbjct: 200 TERRILRTSGGWGERLHDRFVSFLDDLLAMDEEAALERLQSFDGIGEGKATAALNAATNN 259
Query: 300 KNTLQSGKQKV-----QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRV 354
+ +++G V Q +R E V A P +D V+ N L++ P +H +
Sbjct: 260 RAAIEAGNVTVHTAIAQLAQRFAERTVEAENAP-IDEPVTTDTNRLIRLPGSLHGGSSLA 318
Query: 355 CIPIDPKDCEEFDP 368
ID D +FDP
Sbjct: 319 VRRIDRADLTDFDP 332
>gi|389860782|ref|YP_006363022.1| DNA primase, small subunit [Thermogladius cellulolyticus 1633]
gi|388525686|gb|AFK50884.1| DNA primase, small subunit [Thermogladius cellulolyticus 1633]
Length = 388
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 38/190 (20%)
Query: 45 RHPACDKSYFGRREFSFT-LDNDIYLRFQSFNSESELENSI-KEKCPSKIDIGPVYSVDP 102
R P + RE + L+++ Y+R SF S ++L + I +K P + DP
Sbjct: 21 RRPLVEPPNLHSREIALVDLESEAYVRHLSFPSMAQLYHFIVDQKTPLHLYYSSAVYDDP 80
Query: 103 AKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMT--------- 153
+ + +G ELIFDID+ D + C VC+E ++
Sbjct: 81 SAENMSMKGWKG------SELIFDIDV---DHLPGCDLKLKVCVEDNSVLGEHTEKCPSG 131
Query: 154 ---VAIKVID---------------TALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLT 195
V + VI+ L +DFGF + +SG RG H V D A LT
Sbjct: 132 SEPVEVSVIEPECFRKGLGEASKLREILEEDFGFKDVKVYFSGHRGFHVRVSDDSALDLT 191
Query: 196 NEQRGAIADY 205
E R +IADY
Sbjct: 192 REARASIADY 201
>gi|261350778|ref|ZP_05976195.1| putative DNA primase, eukaryotic-type, small subunit
[Methanobrevibacter smithii DSM 2374]
gi|288860533|gb|EFC92831.1| putative DNA primase, eukaryotic-type, small subunit
[Methanobrevibacter smithii DSM 2374]
Length = 324
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 141/337 (41%), Gaps = 65/337 (19%)
Query: 56 RREFSFTLD----NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQG 111
+REF F + ND R++ F L+ ++ K P I + +P +R + +
Sbjct: 33 KREFGFDHNGKGPND---RYKVFRGRESLKKFLRYKAPFAAYISVAFYNNPRRREDWQKA 89
Query: 112 GDNVFAPVERELIFDIDITDYDDVRYC-CSGA-DVCLECWPLMTVAIKVIDTALRDDFGF 169
E IFD+D D +R C C G +VCL + + +IDT L+DD G
Sbjct: 90 ----------EYIFDVDAKDIP-IRSCQCDGVCEVCL--GQALEIVNSLIDT-LQDDLGL 135
Query: 170 DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF---RVYKGN----ENSNKKVSFP 222
++I VYSG RG H + D + +E R + Y V K N + SNK +F
Sbjct: 136 NNIHLVYSG-RGYHIRILDEEMMTSGSELRSEVLKYVAGAEVPKSNFFNPDISNKSFNFE 194
Query: 223 GPLHPFLVRSYTEVLREFFEEKLLLS-QNLFSTEERYEKILSMIPDESVTSELRGKWQEN 281
H + Y+++ F +KL + Q+L EE E ++ D K++ +
Sbjct: 195 ---HFSIPVGYSKI----FTDKLKYNIQHLVGNEELDEINPKLMKDII-------KYRHH 240
Query: 282 RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLL 341
+ N W K + G ++ + L + + + +D +VS +L
Sbjct: 241 LDNDN---------WGYFKRDI--GPRRYKNLTEAMARVNLS----TIDAKVSIDLKRIL 285
Query: 342 KAPFCVHPKTGRVCIPIDPKDCEEFDPT--TVPTLSE 376
+ P +H K C+ + K+ E FDP VP E
Sbjct: 286 RLPSSLHSKVSMKCMEV--KNRETFDPLQEAVPKFVE 320
>gi|148642135|ref|YP_001272648.1| DNA primase small subunit [Methanobrevibacter smithii ATCC 35061]
gi|166223387|sp|A5UJA2.1|PRIS_METS3 RecName: Full=Probable DNA primase small subunit
gi|148551152|gb|ABQ86280.1| DNA primase, small subunit [Methanobrevibacter smithii ATCC 35061]
Length = 324
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 141/337 (41%), Gaps = 65/337 (19%)
Query: 56 RREFSFTLD----NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQG 111
+REF F + ND R++ F L+ ++ K P I + +P +R + +
Sbjct: 33 KREFGFDHNGKGPND---RYKVFRGSESLKKFLRYKAPFAAYISVAFYNNPRRREDWQKA 89
Query: 112 GDNVFAPVERELIFDIDITDYDDVRYC-CSGA-DVCLECWPLMTVAIKVIDTALRDDFGF 169
E IFD+D D +R C C G +VCL + + +IDT L+DD G
Sbjct: 90 ----------EYIFDVDAKDIP-IRSCQCDGVCEVCL--GQALEIVNSLIDT-LQDDLGL 135
Query: 170 DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF---RVYKGN----ENSNKKVSFP 222
++I VYSG RG H + D + +E R + Y V K N + SNK +F
Sbjct: 136 NNIHLVYSG-RGYHIRILDEEMMTSGSELRSEVLKYVAGAEVPKSNFFNPDISNKSFNFE 194
Query: 223 GPLHPFLVRSYTEVLREFFEEKLLLS-QNLFSTEERYEKILSMIPDESVTSELRGKWQEN 281
H + Y+++ F +KL + Q+L EE E ++ D K++ +
Sbjct: 195 ---HFSIPVGYSKI----FTDKLKYNIQHLVGNEELDEINPKLMKDII-------KYRHH 240
Query: 282 RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLL 341
+ N W K + G ++ + L + + + +D +VS +L
Sbjct: 241 LDNDN---------WGYFKRDI--GPRRYKNLTEAMARVNLS----TIDAKVSIDLKRIL 285
Query: 342 KAPFCVHPKTGRVCIPIDPKDCEEFDPT--TVPTLSE 376
+ P +H K C+ + K+ E FDP VP E
Sbjct: 286 RLPSSLHSKVSMKCMEV--KNRETFDPLQEAVPKFVE 320
>gi|325967988|ref|YP_004244180.1| DNA primase, small subunit [Vulcanisaeta moutnovskia 768-28]
gi|323707191|gb|ADY00678.1| putative DNA primase, small subunit [Vulcanisaeta moutnovskia
768-28]
Length = 347
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 122/312 (39%), Gaps = 60/312 (19%)
Query: 56 RREFSFTL-DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
+REF F D + +R SF + EL + + PS + DPA A+G
Sbjct: 29 KREFGFQFFDKEGMIRHASFRNSDELRHYLISNVPSHVYYSSALYNDPANPDMDAKGW-- 86
Query: 115 VFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFD--HI 172
+ +LIFDID D+ C + LEC T + + +L +DFGF I
Sbjct: 87 ----LGADLIFDID-GDHLPTPNCQGAELMTLECLNDATDEVSKLIDSLIEDFGFSDSSI 141
Query: 173 LWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRS 232
+SG RG H + + R L +++R I DY
Sbjct: 142 KIFFSGHRGYHVHIELPEIRGLMDDERREIIDYL-------------------------- 175
Query: 233 YTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDIN 292
+LR F E+ L+ N + R I + S+ EL + N SS + +
Sbjct: 176 ---LLRGFDIER-LIRGNAVLIDARLRGIGGRLA--SLIHELDPELLNN-LSSKKRLSKS 228
Query: 293 FFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
R N++ S + + ++E+V M++ HR L++ P +H KTG
Sbjct: 229 LIRKLNTLNSVISERLSIH-----IDEVV--------TMDI--HR--LIRMPNSLHGKTG 271
Query: 353 RVCIPIDPKDCE 364
+ + P D E
Sbjct: 272 LRVVKVGPSDLE 283
>gi|257053814|ref|YP_003131647.1| DNA primase small subunit [Halorhabdus utahensis DSM 12940]
gi|256692577|gb|ACV12914.1| DNA primase, small subunit [Halorhabdus utahensis DSM 12940]
Length = 386
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 124/316 (39%), Gaps = 43/316 (13%)
Query: 65 NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQ---GGDNVFAPVER 121
+ +R QS +LE+ + + P + DP A+ G D
Sbjct: 43 GETMVRHQSLLDMGDLESFLARERPRHVYFSAGRYTDPGAGSMSAKDWRGSD-------- 94
Query: 122 ELIFDIDITDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
++FD+D V + A++ C + +++D L +DFGF+ + V+SG R
Sbjct: 95 -VVFDLDADHLPSVDPTQATYAEMLAACKDAL---FRLLDF-LENDFGFEDLTIVFSGGR 149
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREF 240
G H V D ++L E R I DY R + + G + +R+ +
Sbjct: 150 GYHVHVRDDGIQQLEREARREIVDYVRGIGLDLDGLVTTEMRGNVTARTLRTEGGWGKRV 209
Query: 241 FEEKLLLSQNLFSTEERYEKILSMIPD-----ESVTSELRGKWQENRRSSNSKEDINFFR 295
E L + + E E+ ++ + D E +RG +ENR + ED N
Sbjct: 210 HEALLAFVDEVEALPE--EQAMTRLQDLEGIGEGRAKTIRGAIEENR---EAIEDGN--- 261
Query: 296 WEQLKNTLQSGKQKVQGLRRCVEEI---VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
+++G G+R+ VE I V +D V+ N L++ P +H +G
Sbjct: 262 -------MEAGG---PGIRKLVEAITGDVIEGQNAPIDEPVTTDTNRLIRLPGSLHGGSG 311
Query: 353 RVCIPIDPKDCEEFDP 368
+ + EFDP
Sbjct: 312 LAVRKLSRDELAEFDP 327
>gi|254167074|ref|ZP_04873927.1| DNA primase, eukaryotic-type, small subunit, putative
[Aciduliprofundum boonei T469]
gi|197623930|gb|EDY36492.1| DNA primase, eukaryotic-type, small subunit, putative
[Aciduliprofundum boonei T469]
Length = 388
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 147/358 (41%), Gaps = 53/358 (14%)
Query: 54 FGRREFSFTL-DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGG 112
F +RE+ F D LR +SF SE++ + E P Y P + +G
Sbjct: 11 FTKREYGFMFFDKKFVLRHKSFKRSSEIKRFLVENVPKHAYYSTAYYKAPDVQDMEEKGW 70
Query: 113 DNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF--D 170
+ +LIFD+D + G + A K+I L D GF +
Sbjct: 71 ------LGADLIFDLDADHIPE----TEGKSYEDMLKIVKKEAEKLIFDFLMGDMGFKEN 120
Query: 171 HILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADY-----------FRV--YKGNENSNK 217
+ +SG RG H +V + + L ++ R I +Y FRV K +
Sbjct: 121 DLFIAFSGGRGYHIYVRNPEVWELDSDDRREIVNYITGEGVDIYKFFRVEEIKTGRKKRR 180
Query: 218 KVSFPGPLH--PFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSEL- 274
K+ + PL+ + + + E++RE LL N F E +KI ++ D+ ++ +L
Sbjct: 181 KIYYLYPLNYGGWYSKVHAEIIRE--SRYLLEIYNSFGENELIKKINEVLEDKKLSKKLV 238
Query: 275 RGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV---QGLRRCVEEIVFAFTYPRLDM 331
R EN+ + + E L N+ +S K ++ LR +++ R+
Sbjct: 239 RELLSENKEYTT--------KLEHLANSEESQKLQIFKNDALRDLF--LIYIKNKIRIKG 288
Query: 332 EVSK------HRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNT 383
EV + HR L++ +H KTG + P+ K+ + F+P + E+ + NT
Sbjct: 289 EVDEPVTIDIHR--LIRLIGSLHGKTGFLVRPLTLKEFKYFNPLR-DAIPEVFKNENT 343
>gi|335438441|ref|ZP_08561185.1| DNA primase small subunit [Halorhabdus tiamatea SARL4B]
gi|334892062|gb|EGM30306.1| DNA primase small subunit [Halorhabdus tiamatea SARL4B]
Length = 386
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 120/313 (38%), Gaps = 37/313 (11%)
Query: 65 NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQ---GGDNVFAPVER 121
+ +R QS +LE+ + + P + DP A+ G D
Sbjct: 43 GETMVRHQSLLDLGDLESFLARERPRHVYFSAGRYTDPGAGSMGAKDWRGSD-------- 94
Query: 122 ELIFDIDITDYDDVR-YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
++FD+D V + A++ C + ++++D L DDFGFD + V+SG R
Sbjct: 95 -VVFDLDADHLPSVDPTAATYAEMLAACKDAL---VRLLDF-LEDDFGFDDLTIVFSGGR 149
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREF 240
G H V D + L E R I DY R + + G + +R+ +
Sbjct: 150 GYHVHVRDDGIQHLEREARREIVDYVRGIGLDLDGLVTTEMRGNVTARTLRTEGGWGKRV 209
Query: 241 FEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLK 300
+E L ++ S +P++ + L QE + + E +
Sbjct: 210 HDELLAFVDDVES-----------LPEDQAMARL----QELEGIGEGRAKTIYGAIEANR 254
Query: 301 NTLQSGKQKVQ--GLRRCVEEI---VFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
++ G + G+R+ VE I V +D V+ N L++ P +H +G
Sbjct: 255 AAIEDGNMEAGGPGIRKLVEAITGDVVDEQNAPIDEPVTTDTNRLIRLPGSLHGGSGLAV 314
Query: 356 IPIDPKDCEEFDP 368
+ ++ +FDP
Sbjct: 315 RKLTREELADFDP 327
>gi|448667282|ref|ZP_21685824.1| DNA primase small subunit [Haloarcula amylolytica JCM 13557]
gi|445770317|gb|EMA21381.1| DNA primase small subunit [Haloarcula amylolytica JCM 13557]
Length = 392
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 97/260 (37%), Gaps = 23/260 (8%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVVLGEDTYAEMLEKCKDALLRLLDFLEDDFGFEDLTVVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYK-------GNENSNKKVSFPGPLHPFLVRSYT 234
H V D + R L + R I DY R E+ P + +
Sbjct: 151 YHVHVRDERIRGLERDARREIVDYVRGIGLEFDELVDEESVAGTAGRSSPAQKRTLSTEG 210
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
L + +L + EE L + + E + N SN
Sbjct: 211 GWSARAHRHMLTVVDDLLAMEE--ADALEQLQEYDGIGEGKATAALNAARSN-------- 260
Query: 295 RWEQLK-NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+EQL+ + Q + + E+V A P +D V+ N L++ P +H +G
Sbjct: 261 -YEQLEAGNIDVHPAFYQLAKILLHEVVAADNAP-IDEPVTTDTNRLIRLPGSLHGGSGL 318
Query: 354 VCIPIDPKDCEEFDPTTVPT 373
ID +D + FDP P
Sbjct: 319 EVQRIDREDIDAFDPLVDPV 338
>gi|448678490|ref|ZP_21689497.1| DNA primase small subunit [Haloarcula argentinensis DSM 12282]
gi|445772477|gb|EMA23522.1| DNA primase small subunit [Haloarcula argentinensis DSM 12282]
Length = 392
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 97/260 (37%), Gaps = 23/260 (8%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L +DFGFD + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVVLGEDSYAEMLAKCKDALLRLLDFLEEDFGFDDLTVVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYK-------GNENSNKKVSFPGPLHPFLVRSYT 234
H V D + R L + R I DY R E+ P + +
Sbjct: 151 YHVHVRDERIRHLERDARREIVDYVRGIGLEFDELVDEESVAGTAGRSSPAQKRTLSTEG 210
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
L + +L + EE L + + E + N SN
Sbjct: 211 GWSARAHRHMLAVVDDLLAMEE--ADALDRLQEYDGIGEGKATAALNAARSN-------- 260
Query: 295 RWEQLK-NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+EQL+ + Q + + E+V A P +D V+ N L++ P +H +G
Sbjct: 261 -YEQLEAGNIDVHPAFYQLAKILLHEVVAADNAP-IDEPVTTDTNRLIRLPGSLHGGSGL 318
Query: 354 VCIPIDPKDCEEFDPTTVPT 373
ID +D + FDP P
Sbjct: 319 EVQRIDREDIDAFDPLVDPV 338
>gi|257077008|ref|ZP_05571369.1| DNA primase small subunit [Ferroplasma acidarmanus fer1]
Length = 374
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 133/329 (40%), Gaps = 49/329 (14%)
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
+RE F N +R + F+S++E+EN ++ P + Y P + +
Sbjct: 21 QREIGFIPFNGTMIRHKKFDSQNEIENFVRRAIPRHLYYSSSYYRFPDQHKMLEK----- 75
Query: 116 FAPVERELIFDID---ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFD-- 170
+ ELIFD+D I D + Y A+V L+ + L DDFGF+
Sbjct: 76 -EWLGAELIFDLDADHIEGADKMTYMEILAEVKKHTLRLLEM--------LMDDFGFEEK 126
Query: 171 HILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFP----GPLH 226
+I +SG RG H V + + ++ R I DY ++ N K + G L
Sbjct: 127 NIRLYFSGGRGYHVHVESDRIYTMDSDSRREIGDYIKIEGLNMEDLKLLDDSYFEYGILK 186
Query: 227 PF--LVRSYTEVLREFFEEKLLLSQ--NLFSTEERY---EKILSMIPDESVTSELRGKWQ 279
F + ++ L E + +K+ N E+Y EKI + +E ++ + +
Sbjct: 187 KFNIYISNFYRNLDENYIKKVFPKSWWNYLEYLEKYYNGEKIRDFLSNEK-GNKFKLLIK 245
Query: 280 ENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNH 339
+N+ + N+ D + ++ +S +D V+ +
Sbjct: 246 QNKSNENASIDYDRIILGKILEDFKSN------------------ALAEIDEPVTTDIHR 287
Query: 340 LLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
L++ P+ +H KTG + P+ + + F+P
Sbjct: 288 LIRFPYSLHGKTGLMVKPVAIGELKTFNP 316
>gi|313217229|emb|CBY38377.1| unnamed protein product [Oikopleura dioica]
Length = 84
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 21 LKVYYGRLFPHADIFKWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESEL 80
L YY FP +W+ Y ND RREFSFTL +D+Y RF+SF S+ EL
Sbjct: 20 LSSYYKEYFPLDPFIEWLGYRNDET--------LSRREFSFTLKDDVYTRFRSFTSKEEL 71
Query: 81 ENSIKEKCPSKID 93
+ + P K++
Sbjct: 72 HQAFIKTKPEKVE 84
>gi|448459789|ref|ZP_21596839.1| DNA primase small subunit [Halorubrum lipolyticum DSM 21995]
gi|445808241|gb|EMA58315.1| DNA primase small subunit [Halorubrum lipolyticum DSM 21995]
Length = 387
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 118/310 (38%), Gaps = 64/310 (20%)
Query: 90 SKIDIGPV--YSVDPAKRHAYAQGG--DNVFAPV-------ERELIFDIDITDYDDVR-Y 137
S D+G V + D A RHAY D+ A +L+FD+D V
Sbjct: 51 SLYDLGDVDTFFADNAPRHAYFSAARYDDPGASTMSGKGWRSADLVFDLDADHLPGVDPE 110
Query: 138 CCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNE 197
S ++ EC + + +D DF FD + V+SG RG H V D R L +E
Sbjct: 111 TTSYPEMLAECKRALLRLLDFLDG----DFAFDDLSVVFSGGRGYHVHVRDESVRELDSE 166
Query: 198 QRGAIADYFRVYK----------GNENSNKKV-----SFPGPLHPFLVRSYTEVLREFFE 242
R + DY R + K+V + +H LV +Y + LR+ E
Sbjct: 167 ARREVVDYVRAIDLDTEGLIRTVSERGTTKRVLRTEGGWGARVHEALV-AYADDLRDMDE 225
Query: 243 ----EKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQ 298
E+L+ + + E R E IL G ++ N +
Sbjct: 226 DAARERLMELEGI--GEGRAETIL-------------GAFERNPTAVR------------ 258
Query: 299 LKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
+ +++G V+ L + V A +D V+ L++ P +H +G V PI
Sbjct: 259 -EGNVEAGGPGVRRLVSALAARVTATDTAPIDEPVTTDTRRLIRLPGTLHGGSGLVVTPI 317
Query: 359 DPKDCEEFDP 368
+ + FDP
Sbjct: 318 ARDELDAFDP 327
>gi|448688919|ref|ZP_21694656.1| DNA primase small subunit [Haloarcula japonica DSM 6131]
gi|445778789|gb|EMA29731.1| DNA primase small subunit [Haloarcula japonica DSM 6131]
Length = 392
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 96/260 (36%), Gaps = 23/260 (8%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDFGFD + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVVLGEDSYAEMLAKCKDALLRLLDFLEDDFGFDDLTIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYK-------GNENSNKKVSFPGPLHPFLVRSYT 234
H V D + R L + R + DY R E+ P + +
Sbjct: 151 YHVHVRDERIRHLERDARREVVDYVRGIGLEFDELVDEESVAGTAGRSSPAQKRTLSTEG 210
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
L + +L + EE L + + E + N SN
Sbjct: 211 GWSARAHRHMLAVVDDLLAMEE--ADALDRLQEYDGIGEGKATAALNAARSN-------- 260
Query: 295 RWEQLK-NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+EQL+ + Q + + E+V A P +D V+ N L++ P +H +G
Sbjct: 261 -YEQLEAGNIDVHPAFYQLAKILLHEVVAADNAP-IDEPVTTDTNRLIRLPGSLHGGSGL 318
Query: 354 VCIPIDPKDCEEFDPTTVPT 373
ID + + FDP P
Sbjct: 319 EVQRIDRDELDSFDPLVDPV 338
>gi|288560231|ref|YP_003423717.1| DNA primase small subunit PriA [Methanobrevibacter ruminantium M1]
gi|288542941|gb|ADC46825.1| DNA primase small subunit PriA [Methanobrevibacter ruminantium M1]
Length = 330
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 124/318 (38%), Gaps = 45/318 (14%)
Query: 56 RREFSFT-LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
+REF F L N R++ F L ++ K P I + +P KR + +
Sbjct: 33 KREFGFDHLGNGPNDRYKVFKGTDTLRRFLRYKTPFAAYISVAFYQNPRKRGGWEKA--- 89
Query: 115 VFAPVERELIFDIDITDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHIL 173
E IFDID D +R C C G VC C + ++ L+ D G +I
Sbjct: 90 -------EYIFDIDAKDLP-IRSCNCDG--VCEICLGEALERVNIMLDTLKGDLGLKNIH 139
Query: 174 WVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSY 233
+YSGR G H + D ++ R + Y G E P +P +V
Sbjct: 140 LIYSGR-GFHIRILDPDMMEADSDLRAEVLKYV---AGAE-------VPRAQYPNIVPGA 188
Query: 234 TEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINF 293
+ E F + +F+ + +Y I + DE++ NR + ++ F
Sbjct: 189 KPLNFEHFSIPIAYPA-VFTNKVKYN-IFHLRGDETIDG------INNRLLKDIIKNREF 240
Query: 294 F---RWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
+W K + G ++ + + + + A +D +V+ +L+ P +H K
Sbjct: 241 LIDDKWGLFKERI--GPRRYKDMVNAMARVNLA----TIDAKVTIDLKRILRLPSSLHSK 294
Query: 351 TGRVCIPIDPKDCEEFDP 368
C+ + K+ E FDP
Sbjct: 295 VSMKCVEV--KNPETFDP 310
>gi|399576608|ref|ZP_10770363.1| DNA primase small subunit [Halogranum salarium B-1]
gi|399238052|gb|EJN58981.1| DNA primase small subunit [Halogranum salarium B-1]
Length = 386
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 156 IKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENS 215
++++D L DDF F+ + V+SG RG H V D R L +E R I DY R + +
Sbjct: 126 LRLLDI-LEDDFAFEELEIVFSGGRGYHVHVRDEGVRELDSEARREIVDYIRAIDLDVDG 184
Query: 216 NKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNL--FSTEERYEKI--LSMIPDESVT 271
+ GP ++R+ + + L L + EE E++ L I + T
Sbjct: 185 LVRTRASGPTTQRVLRTEGGWGKRTHDRLLAFVDELQSMTEEEALERLQELDGIGEGRAT 244
Query: 272 SELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE----EIVFAFTYP 327
+ L G ++ N ++ + +++G GLR VE E+V T P
Sbjct: 245 TIL-GAFERNPQAIET-------------GNVEAGG---PGLRMLVEALAHEVVEDQTAP 287
Query: 328 RLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+D V+ L++ P +H TG I+ +EFDP
Sbjct: 288 -IDEPVTTDLRRLIRLPGSLHGGTGFEVQRIERDAVDEFDP 327
>gi|254167660|ref|ZP_04874511.1| DNA primase, eukaryotic-type, small subunit, putative
[Aciduliprofundum boonei T469]
gi|289596919|ref|YP_003483615.1| DNA primase, small subunit [Aciduliprofundum boonei T469]
gi|197623469|gb|EDY36033.1| DNA primase, eukaryotic-type, small subunit, putative
[Aciduliprofundum boonei T469]
gi|289534706|gb|ADD09053.1| DNA primase, small subunit [Aciduliprofundum boonei T469]
Length = 404
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 150/359 (41%), Gaps = 55/359 (15%)
Query: 54 FGRREFSFTL-DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGG 112
F +RE+ F D LR +SF SE++ + E P Y P + +G
Sbjct: 27 FTKREYGFMFFDKKFVLRHKSFKRSSEIKRFLVENVPKHAYYSTAYYKAPDVQDMEEKGW 86
Query: 113 DNVFAPVERELIFDID---ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF 169
+ +LIFD+D I + + RY V E A K+I L D GF
Sbjct: 87 ------LGADLIFDLDADHIPETEGKRYEDMLKIVKKE-------AEKLIFDFLVGDMGF 133
Query: 170 --DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADY-----------FRV--YKGNEN 214
+ + +SG RG H +V + + L ++ R I +Y FRV K
Sbjct: 134 KENDLFIAFSGGRGYHIYVRNPEVWELDSDNRREIVNYITGEGVDIYKFFRVEEIKTGRR 193
Query: 215 SNKKVSFPGPLH--PFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTS 272
+K+ + PL+ + + + E++RE LL N F E +KI ++ D+ ++
Sbjct: 194 KRRKIYYLYPLNYGGWYSKVHAEIIRE--SRYLLEIYNSFGENELIKKINEVLEDKKLSK 251
Query: 273 EL-RGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRR-CVEEIVFAFTYPRL- 329
+L R EN+ + + E L N+ +S QK+Q + + ++ + ++
Sbjct: 252 KLVRELLSENKEYTT--------KLEHLANSEES--QKLQIFKNDALRDLFLIYIKNKIR 301
Query: 330 -----DMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNT 383
D V+ + L++ +H KTG + + K+ + F+P + E+ + NT
Sbjct: 302 IKGEVDEPVTTDIHRLIRLIGSLHGKTGFLVRSLTLKEFKYFNPLK-DAIPEVFKNENT 359
>gi|242399741|ref|YP_002995166.1| Probable DNA primase small subunit [Thermococcus sibiricus MM 739]
gi|259534483|sp|C6A5C2.1|PRIS_THESM RecName: Full=Probable DNA primase small subunit
gi|242266135|gb|ACS90817.1| Probable DNA primase small subunit [Thermococcus sibiricus MM 739]
Length = 342
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 99/260 (38%), Gaps = 31/260 (11%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
EL+FDID D R VC C K LR+DFGF++I +YSG RG
Sbjct: 93 ELVFDIDAKDLPLKRCNHETGKVCPICLDDAKELTKDTLLILREDFGFENIHLIYSG-RG 151
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H V D A L ++ R I Y +S ++++F +
Sbjct: 152 YHIRVLDDWALGLDSKAREKILSYI-------SSAEEITF----------------EDLQ 188
Query: 242 EEKLLLSQNLFST-EERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLK 300
E K+LLS + R+ + + + + + K Q + E F + +
Sbjct: 189 ERKILLSSGYYRVFRLRFGYFIKRVSEYHLRNIGLNKRQIEQIIDGRDEIYENFVKKAMI 248
Query: 301 NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI-- 358
+ G LR F+ Y D V+ +L+ P +H K G V I
Sbjct: 249 SAFSQGVGYKTLLRLFSLSTTFSKAY--FDGRVTVDVKRILRVPSSLHSKVGLVATYIGN 306
Query: 359 DPKDCEEFDP--TTVPTLSE 376
D KD E+F+P VP E
Sbjct: 307 DEKDLEKFNPFKDAVPKFRE 326
>gi|390937794|ref|YP_006401532.1| DNA primase, small subunit [Desulfurococcus fermentans DSM 16532]
gi|390190901|gb|AFL65957.1| DNA primase, small subunit [Desulfurococcus fermentans DSM 16532]
Length = 375
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 74/178 (41%), Gaps = 39/178 (21%)
Query: 57 REFSF-TLDNDIYLRFQSFNSESELENSIKE-KCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
RE + +L++ Y+R SF +L N I+ K P + +P+ A+G
Sbjct: 33 REIALESLEDRRYIRHLSFPYMEQLYNFIETTKTPLHLYYSSALYSNPSAEEMEAKGWQG 92
Query: 115 VFAPVERELIFDIDITDY-----------------DDVRYCCSGAD----------VCLE 147
ELIFDID Y +D C SG + LE
Sbjct: 93 ------SELIFDIDADKYPGCMQRYLVCSKSGVIINDGESCPSGEEPLEYSPVSWECILE 146
Query: 148 CWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADY 205
W + A+K+ D L DFGF + +SG RG H V D +A LT EQR IADY
Sbjct: 147 AW---SDALKLRDI-LVQDFGFSKVKIYFSGNRGFHVRVLDEEALPLTREQRRLIADY 200
>gi|15678613|ref|NP_275728.1| DNA primase small subunit [Methanothermobacter thermautotrophicus
str. Delta H]
gi|8928285|sp|O26685.1|PRIS_METTH RecName: Full=Probable DNA primase small subunit
gi|2621663|gb|AAB85091.1| DNA primase, small subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 323
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 121/307 (39%), Gaps = 45/307 (14%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R++ F E L ++ + P + +P KR + + ELIFD+D
Sbjct: 51 RYRVFRDERSLARFMRVRYPFAAYSSVAFYREPWKRKGWQRS----------ELIFDVDA 100
Query: 130 TDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCD 188
D VR C C G VC C + ++ L+ D G I +YSG RG H V D
Sbjct: 101 KDLP-VRSCECDG--VCPTCLDEARELVLMMVDTLKGDLGLGDIHVIYSG-RGYHVRVLD 156
Query: 189 GKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLS 248
+ L +E R A+ R G +K + V SY E + L
Sbjct: 157 PEVMELGSEVR---AEILRYTAGAREPRRKFTDG-------VSSY-----EMEHFSIPLG 201
Query: 249 QNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSN-SKEDINFFRWEQLKNTLQSGK 307
+ TE +L + DE + + R+ N ED RW + ++ + G
Sbjct: 202 YHRVFTERARHVLLHLRGDEDIEDVTARTVKTAVRNRNLILED----RWGEFRSVI--GP 255
Query: 308 QKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFD 367
+ L + + +I LD +V+ +L+ P +H K +C+ + K+ E FD
Sbjct: 256 RVYPRLVKGISKINMRM----LDAKVTIDLKRILRLPTSLHSKVSMICMEV--KNPETFD 309
Query: 368 P--TTVP 372
P + VP
Sbjct: 310 PLKSAVP 316
>gi|448630270|ref|ZP_21672925.1| DNA primase small subunit [Haloarcula vallismortis ATCC 29715]
gi|445756193|gb|EMA07568.1| DNA primase small subunit [Haloarcula vallismortis ATCC 29715]
Length = 392
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 93/264 (35%), Gaps = 31/264 (11%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DFGFD + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVVLGEDSYAEMLEKCKDALLRLLDFLEGDFGFDDLTIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYK-------GNENSNKKVSFPGPLHPFLVRSYT 234
H V D + R L + R + DY R E+ P + +
Sbjct: 151 YHVHVRDERIRHLERDARREVVDYVRGIGLEFDELVDEESVAGTAGRSSPAQKRTLSTEG 210
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
L L L + EE S+ + QE R K
Sbjct: 211 GWSARAHRHMLDLVDELLAMEE---------------SDALDRLQEYDRIGEGKATAALN 255
Query: 295 RWEQLKNTLQSGKQKV-----QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHP 349
L++G V Q + + E+V A P +D V+ N L++ P +H
Sbjct: 256 AARSNYEQLEAGNIDVHPAFYQLAKILLHEVVAADNAP-IDEPVTTDTNRLIRLPGSLHG 314
Query: 350 KTGRVCIPIDPKDCEEFDPTTVPT 373
+G ID +D + FDP P
Sbjct: 315 GSGLEVQRIDREDIDAFDPLVDPV 338
>gi|344211320|ref|YP_004795640.1| DNA primase small subunit [Haloarcula hispanica ATCC 33960]
gi|343782675|gb|AEM56652.1| DNA primase small subunit [Haloarcula hispanica ATCC 33960]
Length = 392
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 99/266 (37%), Gaps = 24/266 (9%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVVLGEDSYAEMLAKCKDALLRLLDFLEDDFGFEDLTVVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYK-------GNENSNKKVSFPGPLHPFLVRSYT 234
H V D + R L + R I DY R E+ P + +
Sbjct: 151 YHVHVRDERIRHLERDARREIVDYVRGIGLEFDELVDEESVAGTAGRSSPAQKRTLSTEG 210
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
L + +L +E L + + E + N SN
Sbjct: 211 GWSARAHRHMLAVVDDLLEMDE--ADALEQLQEYDGIGEGKATAALNAARSN-------- 260
Query: 295 RWEQLK-NTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+EQL+ + Q + + E+V A P +D V+ N L++ P +H +G
Sbjct: 261 -YEQLEAGNIDVHPAFYQLAKILLHEVVAADNAP-IDEPVTTDTNRLIRLPGSLHGGSGL 318
Query: 354 VCIPIDPKDCEEFDPTTVPTLSELLR 379
ID D + FDP V T+ E R
Sbjct: 319 EVQRIDRGDIDAFDP-LVDTVPETFR 343
>gi|386000777|ref|YP_005919076.1| DNA primase small subunit [Methanosaeta harundinacea 6Ac]
gi|357208833|gb|AET63453.1| DNA primase small subunit [Methanosaeta harundinacea 6Ac]
Length = 409
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 131/350 (37%), Gaps = 67/350 (19%)
Query: 56 RREFSFTLDND----IYLRFQSFNSESELENSIKEKCPSKI-DIGPVYS--VDPAKRHAY 108
RRE+ F L +D + R ++F++ SEL + I+ + P+ + +Y P R
Sbjct: 30 RREWGFILFDDMPKFVMRRHKAFSTRSELVDYIRTQVPAHVYHSAAIYERPGAPTMREKG 89
Query: 109 AQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFG 168
G D LIFD+D D +R S L+ T + T DFG
Sbjct: 90 WLGAD---------LIFDLDA---DHLRNAPSSYHEMLDFVKAETTKLLEFLTG---DFG 134
Query: 169 F--DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFR-------------VYKGNE 213
F + I V+SG RG H V D + L + +R I DY G+
Sbjct: 135 FGAEEIQVVFSGGRGYHIHVRDPRVTDLGSGERREIVDYLTGRGLDIKKFISKVSVDGDF 194
Query: 214 NSNKKVSF-------PGPLHPF--LVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSM 264
+K V PG F + S E LRE E++ + NL ++ + K ++M
Sbjct: 195 GVDKAVILKCPPENAPGWGKRFNKSILSSFERLREMDEDEAI---NLLTSRKGIGKTIAM 251
Query: 265 IPDESVTSELRGKWQENRRSSNSKEDINFFR------WEQLKNTLQSGKQKVQGLRRCVE 318
+ LR + R E I+FFR W L SG+ G E
Sbjct: 252 ---HIYRTALRDDILDKIRGG---ESIDFFRGSEGFFWNPLIEDYLSGEGVQIGFSLGQE 305
Query: 319 EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
E D V+ L++ P +H TG P+ FDP
Sbjct: 306 E------KGETDEPVTTDVKRLIRFPLSLHGGTGLRVTPLTISGLASFDP 349
>gi|448578362|ref|ZP_21643797.1| DNA primase small subunit [Haloferax larsenii JCM 13917]
gi|445726903|gb|ELZ78519.1| DNA primase small subunit [Haloferax larsenii JCM 13917]
Length = 385
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 103/270 (38%), Gaps = 59/270 (21%)
Query: 122 ELIFDIDI-----TDYDDVRYCCS---GADVCLECWPLMTVAIKVIDTALRDDFGFDHIL 173
+L+FDID D D+ Y G + L+ L L DF FD +
Sbjct: 93 DLVFDIDADHLPGVDPDETNYADMLEFGKEALLDLVDL-----------LERDFDFDEMQ 141
Query: 174 WVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSY 233
V+SG RG H V D R+L ++ R I DY R + + G ++R+
Sbjct: 142 VVFSGGRGYHVHVRDDSVRQLDSDARREIVDYIRAIDLDVEGLIETRQYGTTTRRVLRTE 201
Query: 234 TEVLREFFEEKLLLSQNLFSTEE--RYEKILSMIPDESVTSELRGKWQENRRSSNSKEDI 291
R + L + L EE E+++ EL G I
Sbjct: 202 GGWGRRTHQRLLDFADGLMEMEEDAALERLM----------ELDG--------------I 237
Query: 292 NFFRWEQLKNTLQSGKQKVQ---------GLRRCVE----EIVFAFTYPRLDMEVSKHRN 338
R E + T ++ + ++ G+R VE E V T P +D V+
Sbjct: 238 GEGRAETILGTFRNNPEAIRDGNVEAGGPGVRTLVEALANETVEDETSP-IDEPVTTDTK 296
Query: 339 HLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
L++ P +H +G V P+D + ++FDP
Sbjct: 297 RLIRLPKSLHGGSGLVVQPLDRDEIDDFDP 326
>gi|218884731|ref|YP_002429113.1| putative DNA primase small subunit [Desulfurococcus kamchatkensis
1221n]
gi|218766347|gb|ACL11746.1| Probable DNA primase small subunit [Desulfurococcus kamchatkensis
1221n]
Length = 374
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 73/180 (40%), Gaps = 43/180 (23%)
Query: 57 REFSF-TLDNDIYLRFQSFNSESELENSIKE-KCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
RE + +L++ Y+R SF +L N I+ K P + +P+ A+G
Sbjct: 32 REIALESLEDRRYIRHLSFPYMEQLYNFIETMKTPLHLYYSSALYSNPSAEEMEAKGWQG 91
Query: 115 VFAPVERELIFDIDITDY-----------------DDVRYCCSGAD------VCLECWPL 151
ELIFDID Y +D C SG + V EC
Sbjct: 92 ------SELIFDIDADKYPGCIQRYLVCSKSGVIINDGESCPSGEEPLKYSPVSWEC--- 142
Query: 152 MTVAIKVIDTALR------DDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADY 205
+K D AL+ DFGF + +SG RG H V D +A LT EQR IADY
Sbjct: 143 ---ILKAWDDALKLRDILVQDFGFSKVKIYFSGNRGFHVRVMDEEALPLTREQRRLIADY 199
>gi|395333222|gb|EJF65600.1| hypothetical protein DICSQDRAFT_166603 [Dichomitus squalens
LYAD-421 SS1]
Length = 84
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
R F FTL +YLR+ SF + +L+ + P++ +IG VY R F
Sbjct: 7 RNFVFTLHGVVYLRYNSFATPHDLKKQVCAYNPTRFEIGLVYFARKTVRSV-------AF 59
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLEC 148
AP RELI ++ + D C AD+C C
Sbjct: 60 APQLRELIINMGMFD-------CVTADICCRC 84
>gi|145591988|ref|YP_001153990.1| DNA primase, small subunit [Pyrobaculum arsenaticum DSM 13514]
gi|166223388|sp|A4WLS1.1|PRIS_PYRAR RecName: Full=Probable DNA primase small subunit
gi|145283756|gb|ABP51338.1| DNA primase small subunit [Pyrobaculum arsenaticum DSM 13514]
Length = 312
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
RREF+F +R +SFNS EL I EK P I Y P + +G
Sbjct: 24 RREFAFQPFGGGMVRHKSFNSVDELRRYIVEKTPKHIYHSVAYYERPGEEDMDRKGW--- 80
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWP-LMTVAIKVIDTALRDDFGFDHILW 174
+ +L+FDID D+ + C A V L C K+ID +R +
Sbjct: 81 ---LGADLVFDID-GDHLNTEACKGSAVVSLRCLEDAKEETNKLIDILVR-ELDLRPTRI 135
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFR 207
V+SG RG H + + +L ++R + ++ +
Sbjct: 136 VFSGNRGFHIHITSEEVLKLGTKERREVVNFIK 168
>gi|383319454|ref|YP_005380295.1| DNA primase, eukaryotic-type, small subunit [Methanocella conradii
HZ254]
gi|379320824|gb|AFC99776.1| DNA primase, eukaryotic-type, small subunit, putative [Methanocella
conradii HZ254]
Length = 405
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 46 HPACDKSYFGRREFSFTLDNDI--------YLRFQSFNSESELENSIKEKCPSKIDIGPV 97
HP +RE+ F +D+ R +SFNS EL + ++ GP
Sbjct: 20 HPVMGPPGLAQREWGFLFYDDVPDKSRPVQMHRHKSFNSIGELNDYLRS-------TGPQ 72
Query: 98 YSVDPAKRHAYAQGGDNVFAPVERE-------LIFDIDITDYDDVRYCCSGADVCLECWP 150
++ A + Y Q AP E L+FD+D + SG LE
Sbjct: 73 HAYHSAAYYQYPQ------APTMLEKKWLGADLVFDLDADHLPNPPKSYSG---MLEM-- 121
Query: 151 LMTVAIKVIDTALRDDFGFDH--ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF 206
+ I++ID L DD GF + V+SG RG H V D + + L + +R I DY
Sbjct: 122 VKREIIRLIDEFLMDDLGFSEKDMDIVFSGGRGYHVHVRDERVKALKSPERREIVDYI 179
>gi|327401779|ref|YP_004342618.1| DNA primase small subunit [Archaeoglobus veneficus SNP6]
gi|327317287|gb|AEA47903.1| DNA primase small subunit [Archaeoglobus veneficus SNP6]
Length = 366
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 130/352 (36%), Gaps = 77/352 (21%)
Query: 54 FGRREFSFT----LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYA 109
F RRE++F L + R +F SE +L+ I P+ I Y + P
Sbjct: 34 FKRREWAFVPLDALPAFVMHRHIAFESEEQLKTYILNTIPAHIYYSSAYYLQPDAEKMED 93
Query: 110 QGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF 169
+G ++ +LIFDID D + + L+ + + I L +DFG
Sbjct: 94 KGW------MKADLIFDIDA---DHLPIKVKSMEAALKVAKKEIIRLVKI---LEEDFGI 141
Query: 170 DH--ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHP 227
D + V+SG RG H V + L + +R I DY
Sbjct: 142 DEKDMKIVFSGGRGYHLHVYSDEFTGLGSAERREIVDY---------------------- 179
Query: 228 FLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTS---------ELRGKW 278
LLL+Q T ++ +I + + GK
Sbjct: 180 -----------------LLLNQPARCTSTQWLRIARCVAKRLAIEVKKGNLPKYGISGKQ 222
Query: 279 QENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRN 338
E +++ ++E + R + ++ GK+ + L VEE + +D V+
Sbjct: 223 LERFQAAFNRETLE--RIAEGDFSVFKGKRAERMLETFVEECINRLAV-HVDAPVTADTR 279
Query: 339 HLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDV 390
L++ P +H KTG P+ D E+FDP L+ L GD ++ +
Sbjct: 280 RLIRFPGSLHGKTGLKVTPVSIDDIEDFDP--------LVDALAFGDEKVKI 323
>gi|268325864|emb|CBH39452.1| probable DNA primase small subunit [uncultured archaeon]
Length = 394
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 140/342 (40%), Gaps = 64/342 (18%)
Query: 57 REFSFTLDNDIY------LRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQ 110
RE+ F L + Y R ++F +E EL + ++E P+ Y ++ A+
Sbjct: 31 REWGFVLFDHYYPAKLVMRRHKAFAAEKELVHYLRENAPAH-----AYFSTAIYKYPTAK 85
Query: 111 GGDNVFAPVERELIFDIDITDY-DDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF 169
D + + +LIFD+D D+ + + L+C T K+ID L +DFGF
Sbjct: 86 MADKDW--LGADLIFDLDADHVIDEAEFQSYSYEAILKCVKEETR--KLIDFLL-NDFGF 140
Query: 170 --DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADY----------FRVYKGNENSNK 217
+ I V+SG RG H + + R L + +R I DY F V + S K
Sbjct: 141 PENKIELVFSGSRGYHIHIETEQVRGLGSRERREIVDYVMATGLDINSFLVADSKDKSGK 200
Query: 218 KVS------FPGPLHPFLVRSYTEVLREF--FEEKLLLSQ--NLFSTEERYEK-ILSMIP 266
K P +++ E L E EEK + + ++ + E++ K IL +
Sbjct: 201 KSGREDLRLIPEGWGKRVLKGLIEFLHEIAAMEEKQAIKEVKSVGAMEKKKAKEILRIAN 260
Query: 267 DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTY 326
DE+V S + K Q R S + W +GL + E A+
Sbjct: 261 DETVMSRIE-KGQIPRFSDSI--------W--------------RGLSKSSEAKYSAYA- 296
Query: 327 PRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+ D V+ L++ P +H K+ P+ + ++FDP
Sbjct: 297 DKPDAPVTADIKRLIRLPTSLHGKSSLQVKPLSIETFDDFDP 338
>gi|282164209|ref|YP_003356594.1| probable DNA primase small subunit [Methanocella paludicola SANAE]
gi|282156523|dbj|BAI61611.1| probable DNA primase small subunit [Methanocella paludicola SANAE]
Length = 406
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 46 HPACDKSYFGRREFSFTLDNDI--------YLRFQSFNSESELENSIKEKCPSKIDIGPV 97
HP F +RE+ F D+ R +SFNS +EL + +K P
Sbjct: 20 HPVPMPPGFMQREWGFLFYEDMPDKSRPMQMHRHKSFNSAAELNDYLKSMAPQ------- 72
Query: 98 YSVDPAKRHAYAQGGDNVFAPVERE-------LIFDIDITDYDDVRYCCSGADVCLECWP 150
++ A + Y Q AP E LIFD+D + +G LE
Sbjct: 73 HAYHSAAYYQYPQ------APTMLEKKWLGADLIFDLDADHLPNPPKSYAG---MLEM-- 121
Query: 151 LMTVAIKVIDTALRDDFGFDH--ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF 206
+ +++ID L DD GF + V+SG RG H + D + R L + +R I DY
Sbjct: 122 VKVEIVRLIDEFLIDDLGFSEKDMDIVFSGGRGYHVHIRDERVRTLKSPERREIVDYI 179
>gi|448361748|ref|ZP_21550361.1| DNA primase small subunit [Natrialba asiatica DSM 12278]
gi|445649428|gb|ELZ02365.1| DNA primase small subunit [Natrialba asiatica DSM 12278]
Length = 391
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDTYAEMLATCKEALFRLLDFLEDDFGFEELELVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D R L E R I DY R
Sbjct: 151 YHVHVRDDNVRHLDREHRREIVDYVR 176
>gi|448735005|ref|ZP_21717224.1| DNA primase small subunit [Halococcus salifodinae DSM 8989]
gi|445799059|gb|EMA49441.1| DNA primase small subunit [Halococcus salifodinae DSM 8989]
Length = 392
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 104/266 (39%), Gaps = 24/266 (9%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDF F + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVELGEDSYAEMLGKCKDALLRLLDFLEDDFDFRELDIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H V D + L + R I DY R + + G + LR
Sbjct: 151 YHVHVRDDGVQDLERDARREIVDYVRGIGLDLDGLIATEAVGGTAGRKSPAQKRTLRTEG 210
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELR---GKWQENRRSSNSKEDINFFRWEQ 298
++L + L + DE+ + LR G + +++ N+
Sbjct: 211 GWSARAHRHLLG----FVDDLLELDDEAAIARLREFDGIGEGKAKAALRAARTNY----- 261
Query: 299 LKNTLQSGKQKVQ----GL-RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
++++G V GL +R V E+V A P +D V+ N L++ P +H +G
Sbjct: 262 --ESIETGNIDVHPAFYGLAQRLVPEVVAADNAP-IDEPVTTDTNRLIRLPGSLHGGSGL 318
Query: 354 VCIPIDPKDCEEFDPTTVPTLSELLR 379
PID E FDP V T+ E R
Sbjct: 319 RVAPIDRDHVEAFDP-LVETIPETFR 343
>gi|432329205|ref|YP_007247349.1| DNA primase, eukaryotic-type, small subunit, putative
[Aciduliprofundum sp. MAR08-339]
gi|432135914|gb|AGB05183.1| DNA primase, eukaryotic-type, small subunit, putative
[Aciduliprofundum sp. MAR08-339]
Length = 404
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 152/368 (41%), Gaps = 56/368 (15%)
Query: 54 FGRREFSFTL-DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGG 112
F RRE+ F D LR + F ++ +L+ + + P Y ++P+++ +G
Sbjct: 27 FTRREYGFMFFDKKFVLRHKRFENKKQLKRFLVDYVPKHAYYSTAYYINPSEQDMEEKGW 86
Query: 113 DNVFAPVERELIFDID---ITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF 169
+ +LIFD+D I + + Y A V E K+I L D GF
Sbjct: 87 ------LGADLIFDLDADHIPETEGKSYEEMLAIVKKETE-------KLIFGFLLGDMGF 133
Query: 170 DH--ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF--------------RVYKGNE 213
+ + +SG RG H +V K RL++++R I +Y R+ G +
Sbjct: 134 NEQDLFLSFSGGRGYHVYVRTEKVFRLSSDERREIVNYITGEAVDINRFILKDRIKIGRK 193
Query: 214 NSNKKVSFPGPL----HPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDES 269
+ + + R TE R FE + QN EE +I +I ++
Sbjct: 194 KMRELYYLYPYEYGGWYSKIHRGITEESRRLFE----IYQNA-GKEELVNEIDKIIKNKK 248
Query: 270 VTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKV---QGLRRCVEEIVFAFTY 326
++ ++ + E + +K E L + +S K ++ G+R + +
Sbjct: 249 LSKKIVRELLEESKEYTTK-------IEYLARSDESQKLQIFNDDGIRDAFIQYIKEKLR 301
Query: 327 PR--LDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNTG 384
R +D V+ + L++ +H KTG + P+ K+ ++FDP + + E + N+
Sbjct: 302 IRSEIDEPVTTDIHRLIRLTGSLHGKTGFIVKPLSIKEFKKFDP-LIDAIPETFKNENSK 360
Query: 385 -DSRMDVD 391
+ R+ +D
Sbjct: 361 VNPRIKID 368
>gi|345005077|ref|YP_004807930.1| DNA primase small subunit [halophilic archaeon DL31]
gi|344320703|gb|AEN05557.1| DNA primase small subunit [halophilic archaeon DL31]
Length = 391
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 112/278 (40%), Gaps = 37/278 (13%)
Query: 101 DPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVID 160
DP + A+G +L+FD+D D + + A E A+K +
Sbjct: 83 DPGRNEMAAKGWQGA------DLVFDLDA---DHLPAIDAEAASYAEMLEACKDALKRLL 133
Query: 161 TALRDDFGF--DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKK 218
T L +DFGF D +L V+SG RG H + + L ++ R + DY R + + + +
Sbjct: 134 TLLMEDFGFTEDQLLVVFSGGRGYHVHIREAALLELDSDARREVVDYVRAVELDRDDLVR 193
Query: 219 VSFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELR--- 275
VR + RE E + E E + M D+++++ +
Sbjct: 194 T----------VRHGSTTRRELKTEGGWGRRVHRRLVEFVEDLREMDDDDAMSTLMDLDG 243
Query: 276 -GKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVE----EIVFAFTYPRLD 330
G+ + + + + R + +++G G+RR VE E+ T P +D
Sbjct: 244 IGEGRATTILGAVRNNPDAIR----EGNVEAGG---PGIRRLVEALTAEVTATQTAP-ID 295
Query: 331 MEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
V+ L++ P +H TG V PI + FDP
Sbjct: 296 EPVTTDVRRLIRLPGTLHGGTGFVVKPIPHDELNAFDP 333
>gi|352681799|ref|YP_004892323.1| DNA primase small subunit [Thermoproteus tenax Kra 1]
gi|350274598|emb|CCC81243.1| DNA primase small subunit [Thermoproteus tenax Kra 1]
Length = 316
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVD----PAKRHAYAQG 111
RRE ++ LR +SF S EL + C S+ +G YSV P +R A+G
Sbjct: 26 RREIGMLTMENVVLRHKSFPSIDEL----RRACISEPPLGLYYSVAYYERPDERDMEAKG 81
Query: 112 GDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWP-LMTVAIKVIDTALRDDFGFD 170
+L+FDID D+ D C + L+C A+K++D ALR++ +
Sbjct: 82 WQGA------DLVFDID-GDHLDTESCRGMQLLNLKCLDDAREEALKLLD-ALRNELALN 133
Query: 171 HILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF 206
VYSG RG H V + LT+ +R + D+
Sbjct: 134 GE-PVYSGHRGFHVHVRSKEVMDLTSAERRRLVDFL 168
>gi|379003306|ref|YP_005258978.1| DNA primase, eukaryotic-type, small subunit, putative [Pyrobaculum
oguniense TE7]
gi|375158759|gb|AFA38371.1| DNA primase, eukaryotic-type, small subunit, putative [Pyrobaculum
oguniense TE7]
Length = 312
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 9/159 (5%)
Query: 50 DKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYA 109
D Y RREF+F +R +SFNS EL I EK P I Y P +
Sbjct: 18 DVVYVERREFAFQPFGGGIVRHKSFNSVDELRRYIVEKTPRHIYHSVAYYERPGEDDMDR 77
Query: 110 QGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAI-KVIDTALRDDFG 168
+G + +L+FDID D+ + C V L C K+ID +R +
Sbjct: 78 KGW------LGADLVFDID-GDHLNTEACKGSVVVSLRCLEDAKEETNKLIDILVR-ELD 129
Query: 169 FDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFR 207
V+SG RG H + + +L +R + ++ +
Sbjct: 130 LRPTRIVFSGNRGFHIHITSEEVLKLGARERREVVNFIK 168
>gi|448348741|ref|ZP_21537589.1| DNA primase small subunit [Natrialba taiwanensis DSM 12281]
gi|445642402|gb|ELY95470.1| DNA primase small subunit [Natrialba taiwanensis DSM 12281]
Length = 391
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L +DFGF+ + +V+SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDTYAEMLATCKDALFRLLDFLENDFGFEELEFVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D R L E R I DY R
Sbjct: 151 YHVHVRDDNVRHLDREHRREIVDYVR 176
>gi|409729474|ref|ZP_11271515.1| DNA primase small subunit [Halococcus hamelinensis 100A6]
gi|448723427|ref|ZP_21705945.1| DNA primase small subunit [Halococcus hamelinensis 100A6]
gi|445787693|gb|EMA38432.1| DNA primase small subunit [Halococcus hamelinensis 100A6]
Length = 393
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 105/266 (39%), Gaps = 35/266 (13%)
Query: 119 VERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSG 178
V +L+FD+D D + G D E A+ + L +DFGF + V+SG
Sbjct: 91 VGSDLVFDLDA---DHLPAVELGVDSYGEMLEKCKAALLRLLDFLENDFGFQDLTVVFSG 147
Query: 179 RRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
RG H V D + L ++ R + DY R + G +H V T
Sbjct: 148 GRGYHVHVRDSAVQALESDARREVVDYVR--------GIGLDLEGVIHEEAV-GGTAGRT 198
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMI------PDESVTSELR---GKWQENRRSSNSKE 289
++ L ++ +S + +++S + DE+ LR G + ++
Sbjct: 199 SPARKRTLRTEGGWSARA-HRQLMSFVDDLVEMDDEAAVERLREFEGIGEGKATAALRAA 257
Query: 290 DINFFRWEQLKNTLQSGKQKVQGL-----RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAP 344
N+ + + +G V R+ V E+V A P +D V+ N L++ P
Sbjct: 258 RTNY-------DEIATGNIDVHPAFYSLSRQLVPEVVAADNAP-IDEPVTTDTNRLIRLP 309
Query: 345 FCVHPKTGRVCIPIDPKDCEEFDPTT 370
+H +G +D + E FDP T
Sbjct: 310 GSLHGGSGLCVRRLDREAIEAFDPLT 335
>gi|336476369|ref|YP_004615510.1| DNA primase, small subunit [Methanosalsum zhilinae DSM 4017]
gi|335929750|gb|AEH60291.1| DNA primase, small subunit [Methanosalsum zhilinae DSM 4017]
Length = 390
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 138/365 (37%), Gaps = 79/365 (21%)
Query: 40 YGNDGRHPACDKSYFGRREFSFTLDND----IYLRFQSFNSESELENSIKEKCPSKIDIG 95
Y N+ +P D + RE+ F L ++ + R +SF S E+ ++ PS
Sbjct: 17 YKNNSVNPPVD---YPSREWGFILFDEMPQIVMRRHKSFGSAGEVNEYLEGMVPSHCYYS 73
Query: 96 PVYSVDPAKRHAYAQ---GGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLM 152
Y PA + G D LIFD+D D + + LE +
Sbjct: 74 VAYYRYPAASTMKEKDWLGAD---------LIFDLDA---DHLPGAPTSYSEMLEH--VK 119
Query: 153 TVAIKVIDTALRDDFGF--DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVY- 209
T K+ D L DDFGF D I V+SG RG H + D L + QR I DY
Sbjct: 120 TETFKLYDF-LEDDFGFSEDDIQIVFSGGRGYHLHINDPCVHDLDSSQRREIVDYISSTG 178
Query: 210 ---------------KGNENSNKKVSFPGP--------LHPFLVRSYTEVLREFFEEKLL 246
G EN+ K SFPG ++ F++ ++++ LL
Sbjct: 179 LSIDSMFSKKQVSGDAGQENA-KISSFPGENSGGWEKRINNFIISYLQRIIKKDNAVDLL 237
Query: 247 LSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSN-SKEDINFFRWEQLKNTLQS 305
S N ++R + ++ +I +E LR N + N SK + F +
Sbjct: 238 SSYNGIG-KKRAKTLIDIINNEDEIDLLR-----NGKIGNLSKMPVGFIK---------- 281
Query: 306 GKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEE 365
Q + E++ +D V+ L++ P +H +G + + +
Sbjct: 282 -----QIAYAGINEMI-----ANVDEPVTSDIKRLIRLPGSLHGGSGMKVTVLSSSELDT 331
Query: 366 FDPTT 370
FDP T
Sbjct: 332 FDPLT 336
>gi|448352716|ref|ZP_21541497.1| DNA primase small subunit [Natrialba hulunbeirensis JCM 10989]
gi|445641995|gb|ELY95066.1| DNA primase small subunit [Natrialba hulunbeirensis JCM 10989]
Length = 391
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 94/253 (37%), Gaps = 20/253 (7%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L +DFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPRVTLGEDSYAEMLAKCKDALFRLLNFLENDFGFEELEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYK---GNENSNKKVSFPG---PLHPFLVRSYTE 235
H V D R L E R I DY R N + V+ G P +R
Sbjct: 151 YHVHVRDENVRHLDREHRREIVDYVRGIGLDFDNLIETETVAGLGRKTPTERRTLRIEGG 210
Query: 236 VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
+ E + +L + E+ E L + + E + K N +N
Sbjct: 211 WGKRTHEHFMAFVDDLLALED--EAALESLQEFDGIGEGKAKATLNAARNNR-------- 260
Query: 296 WEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
EQL+ + V L +D V+ N L++ P +H +G
Sbjct: 261 -EQLEMGNVTVHTAVAQLAERFASTAVEEDNAPIDEPVTTDTNRLIRLPGTLHGGSGLKT 319
Query: 356 IPIDPKDCEEFDP 368
+ + + EEFDP
Sbjct: 320 VRLARDELEEFDP 332
>gi|448489740|ref|ZP_21607773.1| DNA primase small subunit [Halorubrum californiensis DSM 19288]
gi|445694474|gb|ELZ46602.1| DNA primase small subunit [Halorubrum californiensis DSM 19288]
Length = 387
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 129/344 (37%), Gaps = 66/344 (19%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPV--YSVDPAKRHAYAQGG-- 112
R S +L D LR + + + S D+G V + D A RHAY
Sbjct: 18 RSVSLSLPPDANLREWGHIPWTPGSGTTMVRHQSLFDLGDVDTFFADNAPRHAYFSAARY 77
Query: 113 DNVFAPV-------ERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALR- 164
DN A +L+FD+D D+ G D +P M A K D LR
Sbjct: 78 DNPGAATMGQKGWRNADLVFDLD-ADH------LPGVDPETTSYPEMLAACK--DALLRL 128
Query: 165 -----DDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYK--------- 210
DDF FD + V+SG RG H V D R L ++ R I DY R
Sbjct: 129 LNFIDDDFSFDDVTVVFSGGRGYHVHVRDESVRELDSDARREIVDYVRAIDLDTDNLIRT 188
Query: 211 -GNENSNKKV-----SFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSM 264
+ + K+V + +H L+ Y + LRE +E + ER ++ +
Sbjct: 189 VSDRGTTKRVLRTEGGWGARVHDALI-EYADDLREMDDE---------AARERLMELDGI 238
Query: 265 IPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAF 324
E +RG + N + + +++G V+ L + V A
Sbjct: 239 --GEGRAKTIRGAFDRNPTAVR-------------EGNVEAGGPGVRRLVSALASRVAAE 283
Query: 325 TYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+D V+ L++ P +H + V P+D + +FDP
Sbjct: 284 DAAPIDEPVTTDTRRLIRLPGTLHGGSALVVTPLDRDELADFDP 327
>gi|18313779|ref|NP_560446.1| DNA primase-like protein [Pyrobaculum aerophilum str. IM2]
gi|34395810|sp|Q8ZTY1.1|PRIS_PYRAE RecName: Full=Probable DNA primase small subunit
gi|18161337|gb|AAL64628.1| DNA primase related protein [Pyrobaculum aerophilum str. IM2]
Length = 312
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
+REF+F + +R +SF S +L + EK P I Y P + +G
Sbjct: 24 KREFAFQPFSGGMVRHKSFKSLEDLRKFVVEKTPRHIYHSAAYYERPGEEDMERKGW--- 80
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWP-LMTVAIKVIDTALRDDFGFDHILW 174
+ +LIFDID D+ D C V L C A K+ID ++ +
Sbjct: 81 ---IGADLIFDID-GDHLDTEACRESKIVSLRCLEDAREEANKLIDVLIQ-ELDLKPTRI 135
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFR 207
V+SG RG H V + +L + +R + +Y +
Sbjct: 136 VFSGNRGFHIHVSSEEVMKLGSRERRELVNYLK 168
>gi|448358937|ref|ZP_21547610.1| DNA primase small subunit [Natrialba chahannaoensis JCM 10990]
gi|445644315|gb|ELY97330.1| DNA primase small subunit [Natrialba chahannaoensis JCM 10990]
Length = 391
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 100/258 (38%), Gaps = 30/258 (11%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D DV G D E A+ + L +DFGF+ + V+SG RG
Sbjct: 94 DLVFDLDADHLPDV---TLGEDSYAEMLAKCKEALFRLLDFLENDFGFEELEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENS---NKKVSFPG---PLHPFLVRSYTE 235
H V D R L E R I DY R + ++ + V+ G P +R
Sbjct: 151 YHVHVRDDNVRHLDREHRREIVDYVRGIGLDFDTLIETETVAGLGRKTPTERRTLRIEGG 210
Query: 236 VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
+ E + +L + E+ E L + + E + K N +N
Sbjct: 211 WGKRTHEHFMTFVDDLLALED--EAALESLQEFDGIGEGKAKATLNAARNN--------- 259
Query: 296 WEQLKNTLQSGKQKV-----QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPK 350
++ L++G V Q R V P +D V+ N L++ P +H
Sbjct: 260 ----RDQLEAGNVTVHTAVAQLAERFASTAVEKDNAP-IDEPVTTDTNRLIRLPGTLHGG 314
Query: 351 TGRVCIPIDPKDCEEFDP 368
+G + + + E+FDP
Sbjct: 315 SGLKTVRLGRDELEDFDP 332
>gi|289580094|ref|YP_003478560.1| DNA primase, small subunit [Natrialba magadii ATCC 43099]
gi|448281333|ref|ZP_21472639.1| DNA primase small subunit [Natrialba magadii ATCC 43099]
gi|289529647|gb|ADD03998.1| DNA primase, small subunit [Natrialba magadii ATCC 43099]
gi|445578755|gb|ELY33155.1| DNA primase small subunit [Natrialba magadii ATCC 43099]
Length = 391
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D DV G D E A+ + L +DFGF+ + V+SG RG
Sbjct: 94 DLVFDLDADHLPDV---TLGEDSYAEMLATCKEALFRLLDFLENDFGFEELEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D R L E R I DY R
Sbjct: 151 YHVHVRDDNVRHLDREHRREIVDYVR 176
>gi|448622944|ref|ZP_21669593.1| DNA primase small subunit [Haloferax denitrificans ATCC 35960]
gi|445753452|gb|EMA04869.1| DNA primase small subunit [Haloferax denitrificans ATCC 35960]
Length = 385
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 104/255 (40%), Gaps = 25/255 (9%)
Query: 120 ERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGR 179
E +L+FDID V +G L+ A+ + + L DDF F+ V+SG
Sbjct: 91 EADLVFDIDADHLPGVDPETTGYADMLDAG---KEALLDLLSLLEDDFAFEETQAVFSGG 147
Query: 180 RGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLRE 239
RG H V D R L +E R + DY R + ++ + G ++R+ R
Sbjct: 148 RGYHVHVRDESVRGLDSEARREVVDYIRAIDLDFDALIETRQHGTTTQRVLRTEGGWGRR 207
Query: 240 FFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL 299
E L L EE + LS + EL G +K + FR
Sbjct: 208 THERLLGFVDALLEMEE--DAALSRL------KELDGIGD-----GRAKTILGAFR--NN 252
Query: 300 KNTLQSGKQKVQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+ ++ G + G+R VE E V T P +D V+ L++ P +H +G
Sbjct: 253 PDAVREGNVEAGGPGVRTLVEALAHETVEDETSP-IDEPVTTDTKRLIRLPKSLHGGSGL 311
Query: 354 VCIPIDPKDCEEFDP 368
V P+D + ++FDP
Sbjct: 312 VVEPLDRDEIDDFDP 326
>gi|147921584|ref|YP_684599.1| DNA primase small subunit [Methanocella arvoryzae MRE50]
gi|121688175|sp|Q0W8M0.1|PRIS_UNCMA RecName: Full=Probable DNA primase small subunit
gi|56295568|emb|CAH04810.1| eukaryotic type DNA primase, small subunit [uncultured archaeon]
gi|110619995|emb|CAJ35273.1| DNA primase, small subunit [Methanocella arvoryzae MRE50]
Length = 400
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 24/145 (16%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYA---QGGDNVFAPVERELIFD 126
R ++FNSE EL + ++ P+ Y RH A Q D + A +LIFD
Sbjct: 48 RHKAFNSEGELADYLRSMPPAH-----AYHSAAYYRHPQAPTMQEKDWLGA----DLIFD 98
Query: 127 IDITDYDDVRYCCSGA---DVCLECWPLMTVAIKVIDTALRDDFGFDH--ILWVYSGRRG 181
+D V+ G +V +E I++ID L DD GF + V+SG RG
Sbjct: 99 LDADHLPGVKNMTYGEMLDNVKVEI-------IRLIDEFLIDDLGFREKDMDIVFSGGRG 151
Query: 182 VHCWVCDGKARRLTNEQRGAIADYF 206
H V D + R L + +R I DY
Sbjct: 152 YHVHVRDERVRTLKSPERREIVDYL 176
>gi|448368963|ref|ZP_21555730.1| DNA primase small subunit [Natrialba aegyptia DSM 13077]
gi|445651506|gb|ELZ04414.1| DNA primase small subunit [Natrialba aegyptia DSM 13077]
Length = 391
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L +DFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDTYAEMLATCKDALFRLLDFLENDFGFEELELVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D R L E R I DY R
Sbjct: 151 YHVHVRDDNVRHLDREHRREIVDYVR 176
>gi|374326955|ref|YP_005085155.1| DNA primase-like protein [Pyrobaculum sp. 1860]
gi|356642224|gb|AET32903.1| DNA primase related protein [Pyrobaculum sp. 1860]
Length = 312
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
RREF+F +R +SF S +L + EK P I Y P + +G
Sbjct: 24 RREFAFQPFGGGMVRHKSFKSLEDLRRFVVEKTPRHIYHSVAYYERPGEEDMEGKGWLGA 83
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWP-LMTVAIKVIDTALRDDFGFDHILW 174
+L+FDID D+ D C V L+C A K++D LR++
Sbjct: 84 ------DLVFDID-GDHLDTEACRGATLVTLQCLEDAREEANKLVDV-LREELDLKPARI 135
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFR 207
V+SG RG H V + L +R + ++ +
Sbjct: 136 VFSGNRGFHIHVSGEEVLGLGARERRELVNFLK 168
>gi|448436707|ref|ZP_21587216.1| DNA primase small subunit [Halorubrum tebenquichense DSM 14210]
gi|445682273|gb|ELZ34693.1| DNA primase small subunit [Halorubrum tebenquichense DSM 14210]
Length = 387
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 129/335 (38%), Gaps = 48/335 (14%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPV--YSVDPAKRHAYAQGG-- 112
R S +L D LR + + + S D+G V + D A RHAY
Sbjct: 18 RSVSLSLPPDANLREWGHIPWTPGSGTTMVRHQSLFDLGDVDTFFADNAPRHAYFSAARY 77
Query: 113 DNVFAPV-------ERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALR- 164
D+ A + +L+FD+D D+ G D +P M A K D LR
Sbjct: 78 DDPGAATMGQKGWRDADLVFDLD-ADH------LPGVDPETTSYPEMLAACK--DALLRL 128
Query: 165 -----DDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKV 219
DDF FD + V+SG RG H V D R L ++ R I DY R ++
Sbjct: 129 LDFIDDDFAFDDVTVVFSGGRGYHVHVRDESVRELDSDARREIVDYVRAI--------EL 180
Query: 220 SFPGPLHPFLVRSYTE-VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKW 278
G +H R T+ VLR + + L Y L DE+ +L
Sbjct: 181 DTGGLIHTVSERGTTKRVLRTEGGWGARVHEALIE----YADDLREKDDEAARDQL---- 232
Query: 279 QENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQ--GLRRCVEEI---VFAFTYPRLDMEV 333
E + + +++ ++ G + G+RR V + V A +D V
Sbjct: 233 MELDGIGEGRAETILGAFDRNPAAVREGNVEAGGPGVRRLVSALAARVTAEDAAPIDEPV 292
Query: 334 SKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+ L++ P +H +G V P+D + EFDP
Sbjct: 293 TTDTRRLIRLPGTLHGGSGLVVTPLDRDELAEFDP 327
>gi|126465544|ref|YP_001040653.1| DNA primase small subunit [Staphylothermus marinus F1]
gi|226705023|sp|A3DM85.1|PRIS_STAMF RecName: Full=Probable DNA primase small subunit
gi|126014367|gb|ABN69745.1| DNA primase small subunit [Staphylothermus marinus F1]
Length = 377
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 33/192 (17%)
Query: 44 GRHPACDKSYFGRREFSF-TLDNDIYLRFQSFNSESELENSI-KEKCPSKIDIGPVYSVD 101
R P + Y +RE + +L+++ Y+R SF S + L N I EK P + Y
Sbjct: 21 SRKPLEEPLYIHKREIAIHSLEDEAYIRHLSFPSITHLYNFILNEKTPLHLYYSSAYYES 80
Query: 102 PAKRHAYAQGGDNVFAPVERELIFDIDITDY---DDVRYCCSGADVC----------LEC 148
P+ +G + +L+FD+D Y D + C + E
Sbjct: 81 PSVNKMELKGW------IGSDLMFDLDSDHYPGCDKILSICIEENTIYDGKIKTCPKTES 134
Query: 149 WPLMTVAIKV------------IDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTN 196
P++ IK I L D+ G +I +SG RG H V D K L +
Sbjct: 135 KPVIHPLIKTECIQKAYRDALRIKYILEDELGLKNIKIYFSGNRGFHVKVIDEKIWDLES 194
Query: 197 EQRGAIADYFRV 208
++R IA Y +
Sbjct: 195 DERREIASYISL 206
>gi|294496349|ref|YP_003542842.1| DNA primase small subunit [Methanohalophilus mahii DSM 5219]
gi|292667348|gb|ADE37197.1| DNA primase small subunit [Methanohalophilus mahii DSM 5219]
Length = 408
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 144/352 (40%), Gaps = 69/352 (19%)
Query: 56 RREFSF----TLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPV---YSVDPAKRHAY 108
+RE+ F ++ + R ++F + EL + + P+ + Y P +
Sbjct: 30 KREWGFISYDSMPETMMYRHKAFGTGGELRDYLVSMQPAHVYHSVALYDYPDAPTMKEKK 89
Query: 109 AQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFG 168
QG D LIFD+D D ++ S LE + T +++++D L DDFG
Sbjct: 90 WQGAD---------LIFDLDA---DHLQDAPSSYAAMLEM--VKTESLRLLDF-LIDDFG 134
Query: 169 FD--HILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLH 226
FD +I V+SG RG H + D K L + QR I DY G + + +
Sbjct: 135 FDEDNIKAVFSGGRGYHFHITDPKIWELESSQRREIVDYV----GGKGIKSEYFYQ---K 187
Query: 227 PFLVRSYTEVLREFFEEKLLLSQNLFSTEER------YEKILSMIPDESV---------T 271
F++ + R F + +LS+ + + E I S + +E
Sbjct: 188 EFMIGDHGTGTRTFNDRTEILSKYVIKNPDTGWGKRLAEYIASYLEEEGQKEEKERFADI 247
Query: 272 SELRG-----KWQENRRSSNSK--EDINFFRWEQLKNTLQSGKQK------VQGLRRCVE 318
++G + + NR + +SK EDI + L GK K Q ++
Sbjct: 248 KHIKGFGKKTRQRMNRITKDSKALEDIR-------RGRLDFGKIKDFKAIMAQFFDNTID 300
Query: 319 E--IVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+ + A + ++D V+ L++ P +H +G IP+ +D E+F+P
Sbjct: 301 QHRVTLAGS-AQVDEPVTADIKRLIRLPGSLHGGSGMKVIPLKLEDMEDFEP 351
>gi|448583341|ref|ZP_21646697.1| DNA primase small subunit [Haloferax gibbonsii ATCC 33959]
gi|445729570|gb|ELZ81165.1| DNA primase small subunit [Haloferax gibbonsii ATCC 33959]
Length = 385
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 120 ERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGR 179
E +L+FDID V +G L+ A+ + L DDF F+ + V+SG
Sbjct: 91 EADLVFDIDADHLPGVDPETTGYADMLDAG---KEALLDLLNLLEDDFAFEEMQAVFSGG 147
Query: 180 RGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLRE 239
RG H V D R L +E R + DY R + ++ + G ++R+ R
Sbjct: 148 RGYHVHVRDESVRGLDSEARREVVDYIRAIDLDFDALVETRQHGTTTQRVLRTEGGWGRR 207
Query: 240 FFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL 299
L L EE + LS + EL G +K + FR
Sbjct: 208 THRRLLAFVDALLEMEE--DAALSRL------KELDGIGD-----GRAKTILGAFR--NN 252
Query: 300 KNTLQSGKQKVQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+ ++ G + G+R VE E V T P +D V+ L++ P +H +G
Sbjct: 253 PDAVREGNVEAGGPGVRTLVEALAHETVEDETSP-IDEPVTTDTKRLIRLPKSLHGGSGL 311
Query: 354 VCIPIDPKDCEEFDP 368
V P+D + ++FDP
Sbjct: 312 VVEPLDRDEIDDFDP 326
>gi|448565391|ref|ZP_21636258.1| DNA primase small subunit [Haloferax prahovense DSM 18310]
gi|445715135|gb|ELZ66891.1| DNA primase small subunit [Haloferax prahovense DSM 18310]
Length = 385
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 25/255 (9%)
Query: 120 ERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGR 179
E +L+FDID V +G L+ A+ + + L DDF F+ + V+SG
Sbjct: 91 EADLVFDIDADHLPGVDPETTGYADMLDAG---KEALLDLLSLLEDDFAFEEMQAVFSGG 147
Query: 180 RGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLRE 239
RG H V D R L +E R + DY R + ++ + G ++R+ R
Sbjct: 148 RGYHVHVRDESVRGLDSEARREVVDYIRAIDLDFDALVETRQHGTTTQRVLRTEGGWGRR 207
Query: 240 FFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL 299
L L EE + LS + EL G +K + FR
Sbjct: 208 THRRLLAFVDALLEMEE--DAALSRL------KELDGIGD-----GRAKTILGAFR--NN 252
Query: 300 KNTLQSGKQKVQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+ ++ G + G+R VE E V T P +D V+ L++ P +H +G
Sbjct: 253 PDAVREGNVEAGGPGVRTLVEALAHETVEDETSP-IDEPVTTDTKRLIRLPKSLHGGSGL 311
Query: 354 VCIPIDPKDCEEFDP 368
V P+D + ++FDP
Sbjct: 312 VVEPLDRDEIDDFDP 326
>gi|385806136|ref|YP_005842534.1| DNA primase small subunit [Fervidicoccus fontis Kam940]
gi|383795999|gb|AFH43082.1| DNA primase small subunit [Fervidicoccus fontis Kam940]
Length = 389
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 101/272 (37%), Gaps = 65/272 (23%)
Query: 57 REFSFT-LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
REF+ +D Y+R SF SE EL + + + P + P +G
Sbjct: 42 REFAVQPIDYKGYVRHLSFKSEDELRSFLLKNPPMHLYYSSAIYTFPEIDDMEKKG---- 97
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADV--CLECWPLM--------------------- 152
+ E+IFDID D+V C S + CL C L+
Sbjct: 98 --MIGSEIIFDID---ADEVPGCESIEQLHACLNCGSLLYGKSIKKCTKCGSQNVIEVEP 152
Query: 153 ---------TVAIKVIDTALRDDFGFDHILWVYSGRRGVHCW-VCDGKARRLTNEQRGAI 202
+ K + LR DFGF+ I +SG RG H CD + +LT+E+R I
Sbjct: 153 IPKECILKAGIEAKKLIKVLRKDFGFEKIKIYFSGNRGFHVHPKCDDEWLKLTSEERSMI 212
Query: 203 ADYFR---------VYKGNENSNKKVSFPGPLHPFLVRSYTEVLRE-----------FFE 242
Y + G K + P P P E+L + F E
Sbjct: 213 IKYITGSGVNIERIIGLGESIKGKNMYIPNPKEPGWRGRLGEILYKKMNLNDEKKITFGE 272
Query: 243 EKLLLSQNLFSTEERYEKILSMIPDESVTSEL 274
++LL + + + K+ S+ DE VT ++
Sbjct: 273 AEVLLGEKINLND--IMKMASISIDEKVTVDV 302
>gi|320100254|ref|YP_004175846.1| DNA primase small subunit [Desulfurococcus mucosus DSM 2162]
gi|319752606|gb|ADV64364.1| DNA primase small subunit [Desulfurococcus mucosus DSM 2162]
Length = 375
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 74/184 (40%), Gaps = 32/184 (17%)
Query: 47 PACDKSYFGRREFSF-TLDNDIYLRFQSFNSESELENSIKE-KCPSKIDIGPVYSVDPAK 104
P + S RE + +L++ Y+R SF +L I+ K P + DP+
Sbjct: 24 PLEEPSNLHMREVALESLEDGKYIRHLSFPYMEKLYEFIQGGKTPLHLYYSSALYSDPSA 83
Query: 105 RHAYAQGGDNVFAPVERELIFDIDITDYDD----VRYCCSGADVCLEC----------WP 150
++G ELIFDID Y + C G V E +P
Sbjct: 84 EDMESKGWQG------SELIFDIDADKYPGCSQVFKICIGGGVVDGEAGCPGGREPVEYP 137
Query: 151 LM---------TVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGA 201
++ A+++ D LRD GF I +SG RG H V D A LT EQR
Sbjct: 138 VVPWDCIRRAWESALRLRDILLRD-LGFSRIKIYFSGNRGFHVRVLDESALPLTREQRRL 196
Query: 202 IADY 205
+ADY
Sbjct: 197 LADY 200
>gi|332796929|ref|YP_004458429.1| DNA primase small subunit, PriSL [Acidianus hospitalis W1]
gi|332694664|gb|AEE94131.1| DNA primase small subunit, PriSL [Acidianus hospitalis W1]
Length = 313
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 31/175 (17%)
Query: 57 REFSFT-LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
REF+ D Y+R SF+S EL+N I E P + P+ + +G
Sbjct: 21 REFAIQPFGKDTYVRHLSFSSPLELKNFIIENLPLHLFYSTAKYQIPSAKEMDEKGW--- 77
Query: 116 FAPVERELIFDIDITDYDDVR------YCCSGAD----------------VCLECWPLMT 153
+ +L FDID + +VR C S D + +C
Sbjct: 78 ---MGADLQFDIDADELCEVRKINFCPVCGSEVDGEKCPKDNVETVEFTEITSDCINKAL 134
Query: 154 VAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV-CDGKARRLTNEQRGAIADYFR 207
+I L++DFG + L+ +SG RG H +V C G L +E R I DY +
Sbjct: 135 ENALIIKDILKEDFGLNPELY-FSGNRGFHVYVRCSGDCALLDSEDRKEIVDYIK 188
>gi|119871951|ref|YP_929958.1| DNA primase, small subunit [Pyrobaculum islandicum DSM 4184]
gi|166223390|sp|A1RRN3.1|PRIS_PYRIL RecName: Full=Probable DNA primase small subunit
gi|119673359|gb|ABL87615.1| DNA primase small subunit [Pyrobaculum islandicum DSM 4184]
Length = 312
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
+REF+F +R ++F + EL+ + EK P I Y P + +G
Sbjct: 24 KREFAFQYFEGGIVRHRAFKTLEELKKFVIEKTPRHIYHSSAYYERPGEEDMERKGW--- 80
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECW-PLMTVAIKVIDTALRDDFGFDHILW 174
+ +LIFDID D+ D C V + C A K+ID L + G
Sbjct: 81 ---LGADLIFDID-GDHLDTEACRESKLVSIACLNDAKEEANKLIDV-LTGELGLKPRRV 135
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFR 207
V+SG RG H V + + L ++R + +Y +
Sbjct: 136 VFSGNRGFHIHVSEEEVLTLGAKERRELVNYLK 168
>gi|15921179|ref|NP_376848.1| DNA primase small subunit [Sulfolobus tokodaii str. 7]
Length = 323
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 35/192 (18%)
Query: 57 REFSFT-LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
REF++ D++ Y+R SF+S EL I + P + P+ + +G
Sbjct: 36 REFAYQPFDSETYVRHLSFSSPQELRQYILQNVPLHLYYSSARYQLPSAKEMDEKGW--- 92
Query: 116 FAPVERELIFDIDITDYDDV---RYC-----------CSG------ADVCLECWPLMTVA 155
+ +L+FD+D + +V R+C C+G A++ EC +
Sbjct: 93 ---LGSDLLFDLDADEICEVKVRRFCPQDGYETLASNCNGEPPIEYAEITTECIMKVFEK 149
Query: 156 IKVIDTALRDDFGFDHILWVYSGRRGVHCWV-CDGKARRLTNEQRGAIADYFR------V 208
+I L++DFG + ++ +SG RG H V C L + R IA+YF +
Sbjct: 150 ALLIRDILKEDFGLNARIF-FSGNRGFHLRVTCYEDCALLDPDDRKEIAEYFTSPKPPVI 208
Query: 209 YKGNENSNKKVS 220
Y+GN + +++
Sbjct: 209 YEGNPGWSGRIA 220
>gi|395324740|gb|EJF57175.1| hypothetical protein DICSQDRAFT_174234 [Dichomitus squalens
LYAD-421 SS1]
Length = 130
Score = 47.4 bits (111), Expect = 0.016, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
R+F FTL +YLR+ SF + +L+ + ++ +IG VY + A F
Sbjct: 54 RDFMFTLHGVVYLRYNSFATPHDLKKQVCAYNLTRFEIGLVYFARTVRSVA--------F 105
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLEC 148
AP RELI ++ + D C AD+C C
Sbjct: 106 APQLRELIINMGMFD-------CVTADICCRC 130
>gi|448711980|ref|ZP_21701523.1| DNA primase small subunit [Halobiforma nitratireducens JCM 10879]
gi|445791065|gb|EMA41714.1| DNA primase small subunit [Halobiforma nitratireducens JCM 10879]
Length = 391
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 95/257 (36%), Gaps = 28/257 (10%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDSYAEMLATCKDALFRLLDFLEDDFAFEELEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR-VYKGNENSNKKVSFPG-----PLHPFLVRSYTE 235
H V D R L E R I DY R + E + + G P +R
Sbjct: 151 YHVHVRDDNVRHLEREHRREIVDYVRGIGLDFEELIETETVAGLGRKTPTERRTLRIEGG 210
Query: 236 VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
R + +L EE + L + + E + + N +N
Sbjct: 211 WGRRVHSHFMAFVDDLLEMEE--DAALERLQEFDGIGEGKAQATLNAARNN--------- 259
Query: 296 WEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPR----LDMEVSKHRNHLLKAPFCVHPKT 351
+ L+SG V + E + R +D V+ N L++ P +H +
Sbjct: 260 ----REGLESGNVTVHTAVAQLAERFASKAVERDNAPIDEPVTTDTNRLIRLPGTLHGGS 315
Query: 352 GRVCIPIDPKDCEEFDP 368
G + ++ + EEFDP
Sbjct: 316 GLETVRLERDELEEFDP 332
>gi|363548472|sp|Q973F6.2|PRIS_SULTO RecName: Full=Probable DNA primase small subunit
gi|342306327|dbj|BAK54416.1| DNA primase small subunit [Sulfolobus tokodaii str. 7]
Length = 318
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 35/192 (18%)
Query: 57 REFSFT-LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
REF++ D++ Y+R SF+S EL I + P + P+ + +G
Sbjct: 31 REFAYQPFDSETYVRHLSFSSPQELRQYILQNVPLHLYYSSARYQLPSAKEMDEKGW--- 87
Query: 116 FAPVERELIFDIDITDYDDV---RYC-----------CSG------ADVCLECWPLMTVA 155
+ +L+FD+D + +V R+C C+G A++ EC +
Sbjct: 88 ---LGSDLLFDLDADEICEVKVRRFCPQDGYETLASNCNGEPPIEYAEITTECIMKVFEK 144
Query: 156 IKVIDTALRDDFGFDHILWVYSGRRGVHCWV-CDGKARRLTNEQRGAIADYFR------V 208
+I L++DFG + ++ +SG RG H V C L + R IA+YF +
Sbjct: 145 ALLIRDILKEDFGLNARIF-FSGNRGFHLRVTCYEDCALLDPDDRKEIAEYFTSPKPPVI 203
Query: 209 YKGNENSNKKVS 220
Y+GN + +++
Sbjct: 204 YEGNPGWSGRIA 215
>gi|448414116|ref|ZP_21577255.1| DNA primase small subunit [Halosarcina pallida JCM 14848]
gi|445682409|gb|ELZ34826.1| DNA primase small subunit [Halosarcina pallida JCM 14848]
Length = 384
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 96/249 (38%), Gaps = 17/249 (6%)
Query: 122 ELIFDIDITDYDDVR-YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
+L+FD+D V S AD+ C + ++ +D +DF F V+SG R
Sbjct: 93 DLVFDLDADHLPGVDPETTSYADMLAACKEDLLKLLEFLD----EDFDFRETQVVFSGGR 148
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGN-ENSNKKVSFPGPLHPFLVRSYTEVLRE 239
G H V D R L +E R I DY R + E S G L R R
Sbjct: 149 GYHVHVRDESVRGLDSEARREIVDYVRAIDLDVEGLVGTESNRGTTRRVLRRRGGWGAR- 207
Query: 240 FFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQL 299
E L L+ +L +E L + + E R K + SN + R +
Sbjct: 208 VHERLLTLASDLREMDE--ASALERLQELQGIGEGRAKTILGQVHSN----FDAIREGNV 261
Query: 300 KNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPID 359
+ + V L R E V A T P +D V+ L++ P +H + P+D
Sbjct: 262 EAGGPGTRILVDALAR---EAVEAETAP-IDEPVTTDTKRLIRLPGSLHGGSSLRVKPLD 317
Query: 360 PKDCEEFDP 368
D +FDP
Sbjct: 318 RDDIADFDP 326
>gi|126459604|ref|YP_001055882.1| DNA primase small subunit [Pyrobaculum calidifontis JCM 11548]
gi|166223389|sp|A3MUU9.1|PRIS_PYRCJ RecName: Full=Probable DNA primase small subunit
gi|126249325|gb|ABO08416.1| DNA primase small subunit [Pyrobaculum calidifontis JCM 11548]
Length = 312
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
+REF+F +R ++F + EL+ + EK P + P + +G
Sbjct: 24 KREFAFQPFVGGMVRHKAFKNLEELKRHLVEKTPRHVYYSTARYERPWEEDMERKGWLGA 83
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWP-LMTVAIKVIDTALRDDFGFDHILW 174
+L+FDID D+ D C V L C A K+ID L ++ G
Sbjct: 84 ------DLVFDID-GDHLDTEACRESKVVSLACLEDAKEEANKLIDV-LTEELGLKPTKV 135
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFR 207
V+SG RG H V D + L ++R + +Y +
Sbjct: 136 VFSGNRGFHVHVVDEEVLALGQKERRELVNYLK 168
>gi|448298681|ref|ZP_21488709.1| DNA primase small subunit [Natronorubrum tibetense GA33]
gi|445591351|gb|ELY45557.1| DNA primase small subunit [Natronorubrum tibetense GA33]
Length = 391
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDFGF+ + +V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYAEMLAKCKDALFRLIEFLEDDFGFEELEFVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLHLDREHRREIVDYVR 176
>gi|57641726|ref|YP_184204.1| DNA primase small subunit [Thermococcus kodakarensis KOD1]
gi|73921772|sp|Q5JJ72.1|PRIS_PYRKO RecName: Full=Probable DNA primase small subunit
gi|57160050|dbj|BAD85980.1| eukaryotic-type DNA primase, small subunit [Thermococcus
kodakarensis KOD1]
Length = 346
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 127/323 (39%), Gaps = 48/323 (14%)
Query: 56 RREFSFTLDND-IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
RREF F + R +F+ +LE+ I+ P + +P + +
Sbjct: 36 RREFGFDHTGEGPSDRKNAFSDVRDLEDYIRATAPYAAYSSVAFYRNPQEMEGWLGA--- 92
Query: 115 VFAPVERELIFDIDITDYDDVRYCCS---GADVCLECWPLMTVAIKVIDTALRDDFGFDH 171
EL+FDID D +R C + VC C + L++DFGF++
Sbjct: 93 -------ELVFDIDAKDLP-LRRCQNEHPSGQVCPICLEDAKELARDTLIILKEDFGFEN 144
Query: 172 ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVR 231
I VYSG RG H V D A +L ++ R I Y ++ ++V+F +++
Sbjct: 145 IHVVYSG-RGYHIRVIDEWALKLDSKARERILSYV-------SAAEEVTFDDIQKRYIML 196
Query: 232 S--YTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKE 289
S Y V R F + + E L I + T+E E R ++
Sbjct: 197 SSGYFRVFRLRFG---------YFIQRINENHLKNIGLKRSTAE--KLLDEKTRQDIVEK 245
Query: 290 DINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPR--LDMEVSKHRNHLLKAPFCV 347
+N K L + + V G R + + T+ + D V+ +L+ P +
Sbjct: 246 FVN-------KGLLAAFPEGV-GYRTLLRLFGLSTTFSKAYFDGRVTVDLKRILRLPSTL 297
Query: 348 HPKTGRVCIPI--DPKDCEEFDP 368
H K G V I D K E+FDP
Sbjct: 298 HSKVGLVATYIGSDEKRLEKFDP 320
>gi|315231435|ref|YP_004071871.1| DNA primase small subunit [Thermococcus barophilus MP]
gi|315184463|gb|ADT84648.1| DNA primase small subunit [Thermococcus barophilus MP]
Length = 345
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 119/317 (37%), Gaps = 42/317 (13%)
Query: 57 REFSFTLDND-IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
REF F D R F+ +LE+ +K P I +P + +
Sbjct: 37 REFGFDHTGDGPSDRKNVFHDIRDLEDYVKATAPYAIFSSVALYEEPKEMSGWLGA---- 92
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWV 175
EL+FDID D R VC C K L++DFGF+ I V
Sbjct: 93 ------ELVFDIDAKDLPLRRCNHESGTVCPICLEDAKELAKDTLIVLKEDFGFEDIHIV 146
Query: 176 YSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTE 235
YSG RG H V D A L ++ R I Y +S ++V+F ++S
Sbjct: 147 YSG-RGYHIRVLDEWALELDSKAREKILAY-------TSSAEEVTFDD------IQSKRI 192
Query: 236 VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDIN--F 293
+L + L F RY + ++ ++ S + ++KE IN F
Sbjct: 193 MLSSGYFRVFRLRFGYFIMRVRYNHLKNIGLNKKQISLI----------LSNKEKINQGF 242
Query: 294 FRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+ +L Q K LR F+ Y D V+ +L+ P +H K G
Sbjct: 243 VKEARLTAFPQGIGYKTL-LRLFALSTTFSKAY--FDGRVTVDVKRILRVPSSLHSKVGL 299
Query: 354 VCIPIDP--KDCEEFDP 368
+ I K+ E+F+P
Sbjct: 300 ITTYIGSKEKELEKFNP 316
>gi|169236206|ref|YP_001689406.1| DNA primase small subunit [Halobacterium salinarum R1]
gi|34395977|sp|Q9HPU3.2|PRIS_HALSA RecName: Full=Probable DNA primase small subunit
gi|226705021|sp|B0R5P1.1|PRIS_HALS3 RecName: Full=Probable DNA primase small subunit
gi|167727272|emb|CAP14058.1| DNA primase small subunit [Halobacterium salinarum R1]
Length = 391
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 14/250 (5%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DFGF+ + +SG RG
Sbjct: 94 DLVFDLDA---DHLPRVTLGEDSYAEMLSKCKDALLRLLDFLERDFGFEELTVTFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H V D L +E+R I DY R GN+ + + + P+ + + TE +
Sbjct: 151 YHVHVRDAGVYELGSEERREIVDYVR---GNDLALETLVEAEPVGGRGLENPTE--KRML 205
Query: 242 EEKLLLSQNLFSTEERY-EKILSMIPDESVT--SELRGKWQENRRSSNSKEDINFFRWEQ 298
+ + + E + + ++ D++V +E G + + R+ + N ++
Sbjct: 206 PADGGWGRRVTTRLEAFADDLIERGEDDAVATLTEFDGVGERSARAIYNVVADNTTAVKR 265
Query: 299 LKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
+ V RR ++E V A P +D V+ N L++ P +H +G +
Sbjct: 266 GNVDVHPAFLTVA--RRYIDETVAAEQAP-IDEPVTTDTNRLIRLPGSLHGGSGLEVQRL 322
Query: 359 DPKDCEEFDP 368
D ++FDP
Sbjct: 323 DRAALDDFDP 332
>gi|15790470|ref|NP_280294.1| DNA primase small subunit [Halobacterium sp. NRC-1]
gi|10580966|gb|AAG19774.1| DNA primase [Halobacterium sp. NRC-1]
Length = 424
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 14/250 (5%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DFGF+ + +SG RG
Sbjct: 127 DLVFDLDA---DHLPRVTLGEDSYAEMLSKCKDALLRLLDFLERDFGFEELTVTFSGGRG 183
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H V D L +E+R I DY R GN+ + + + P+ + + TE +
Sbjct: 184 YHVHVRDAGVYELGSEERREIVDYVR---GNDLALETLVEAEPVGGRGLENPTE--KRML 238
Query: 242 EEKLLLSQNLFSTEERY-EKILSMIPDESVT--SELRGKWQENRRSSNSKEDINFFRWEQ 298
+ + + E + + ++ D++V +E G + + R+ + N ++
Sbjct: 239 PADGGWGRRVTTRLEAFADDLIERGEDDAVATLTEFDGVGERSARAIYNVVADNTTAVKR 298
Query: 299 LKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
+ V RR ++E V A P +D V+ N L++ P +H +G +
Sbjct: 299 GNVDVHPAFLTVA--RRYIDETVAAEQAP-IDEPVTTDTNRLIRLPGSLHGGSGLEVQRL 355
Query: 359 DPKDCEEFDP 368
D ++FDP
Sbjct: 356 DRAALDDFDP 365
>gi|429193586|ref|YP_007179264.1| DNA primase small subunit [Natronobacterium gregoryi SP2]
gi|448326383|ref|ZP_21515747.1| DNA primase small subunit [Natronobacterium gregoryi SP2]
gi|429137804|gb|AFZ74815.1| DNA primase, eukaryotic-type, small subunit, putative
[Natronobacterium gregoryi SP2]
gi|445612423|gb|ELY66148.1| DNA primase small subunit [Natronobacterium gregoryi SP2]
Length = 391
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDSYAEMLATCKDALLRLLDFLEDDFAFEEMEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D R L E R I DY R
Sbjct: 151 YHVHVRDDDIRHLEREHRREIVDYVR 176
>gi|448731252|ref|ZP_21713555.1| DNA primase small subunit [Halococcus saccharolyticus DSM 5350]
gi|445792846|gb|EMA43447.1| DNA primase small subunit [Halococcus saccharolyticus DSM 5350]
Length = 392
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 104/270 (38%), Gaps = 32/270 (11%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDF F + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVELGEDSYAEMLEKCKDALLRLLDFLEDDFDFQELDVVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H V D + L + R I DY R + + G + LR
Sbjct: 151 YHVHVRDDGIQDLERDARREIVDYVRGIGLDLDGLIATEAVGGTAGRTSPAQKRTLRTEG 210
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELR-------GKWQENRRSSNSKEDINFF 294
+L + L + DE+ + LR GK + R++ + N+
Sbjct: 211 GWSARAHHHLLG----FVDDLLELDDEAAIARLREFDGIGEGKAEAALRAART----NY- 261
Query: 295 RWEQLKNTLQSGKQKVQ----GL-RRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHP 349
++++G V GL R + ++V A P +D V+ N L++ P +H
Sbjct: 262 ------ESIEAGNIDVHPAFYGLAERLLPDVVAADNAP-IDEPVTTDTNRLIRLPGSLHG 314
Query: 350 KTGRVCIPIDPKDCEEFDPTTVPTLSELLR 379
+G +PI E F+P T T+ E R
Sbjct: 315 GSGLRVVPIARDHVEAFEPLT-ETIPETFR 343
>gi|119719534|ref|YP_920029.1| putative DNA primase, small subunit [Thermofilum pendens Hrk 5]
gi|119524654|gb|ABL78026.1| DNA primase small subunit [Thermofilum pendens Hrk 5]
Length = 389
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 40/189 (21%)
Query: 52 SYFGRREFSFTLDNDI-YLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQ 110
S +REF+F++ N +R SF++ EL++ I+ P Y P+ + +
Sbjct: 33 SELSKREFAFSMFNSTSMIRHLSFSTREELDDYIRVNVPQHAYYSSAYYQYPSAQEMGEK 92
Query: 111 GGDNVFAPVERELIFDIDI-------TDYDDVRYCCS--GAD------------------ 143
G + +L+FDID+ D D R+ C GA+
Sbjct: 93 GW------LGADLVFDIDVDHIPTPCKDLHD-RWRCQDCGAEGWGFTKKCPSCGSERLEW 145
Query: 144 ---VCLECWPLMTVAIKVIDTALRDDFGFD--HILWVYSGRRGVHCWVCDGKARRLTNEQ 198
VC C + + + L DDFGFD + +SG RG H V + L +
Sbjct: 146 SKWVCSTCINVAREEMIKLVEILEDDFGFDRAEMRVAFSGHRGFHLHVESEAVKDLDQDA 205
Query: 199 RGAIADYFR 207
R I DY R
Sbjct: 206 RREITDYVR 214
>gi|328853440|gb|EGG02579.1| hypothetical protein MELLADRAFT_91280 [Melampsora larici-populina
98AG31]
Length = 207
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 54 FGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKR 105
F +EF+ TL N+ Y R+ S+ S +L+ + P++ +IGP Y+ P R
Sbjct: 156 FTHQEFAVTLQNEAYRRYNSYASHVKLQKDVIRSNPTRFEIGPAYTAQPKDR 207
>gi|390961069|ref|YP_006424903.1| DNA primase small subunit [Thermococcus sp. CL1]
gi|390519377|gb|AFL95109.1| DNA primase small subunit [Thermococcus sp. CL1]
Length = 343
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 109/300 (36%), Gaps = 53/300 (17%)
Query: 79 ELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYC 138
+LE+ I+ P I +PA+ + EL+FDID D R
Sbjct: 60 DLEDYIRTTAPYAIYSSVALYNEPAEMEGWLGA----------ELVFDIDAKDLPLRRCN 109
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQ 198
VC C + L++DFGF+ + VYSG RG H V D A +L
Sbjct: 110 HEHGKVCPICLEDAKELARDTLIVLKEDFGFEKVHVVYSG-RGYHIRVLDEWAMKLDGRA 168
Query: 199 RGAIADYFRVYKGNENSNKKVSFP--GPLHPFLVRSYTEVLREFFEE--KLLLSQNLFST 254
R + Y ++ ++VSF G L Y V R F K + +L +
Sbjct: 169 REKVLAYV-------SAAEEVSFDDIGSRRIMLSSGYYRVFRLRFGYFLKRMNENHLLNL 221
Query: 255 EERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDI--NFFRWEQLKNTLQSGKQKVQG 312
R ++ +I ++EDI F R K L + V G
Sbjct: 222 GLRKGQVERLI--------------------QAREDIYEGFVR----KGLLTAFPPGV-G 256
Query: 313 LRRCVEEIVFAFTYPR--LDMEVSKHRNHLLKAPFCVHPKTGRVC--IPIDPKDCEEFDP 368
+ + T+ + D V+ +L+ P +H K G V I D K E F+P
Sbjct: 257 YKTLTRLFALSSTFSKAYFDGRVTVDVKRILRLPSSLHSKVGLVATYIGADEKKLERFNP 316
>gi|296241790|ref|YP_003649277.1| DNA primase small subunit [Thermosphaera aggregans DSM 11486]
gi|296094374|gb|ADG90325.1| DNA primase small subunit [Thermosphaera aggregans DSM 11486]
Length = 370
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 36/193 (18%)
Query: 56 RREFSF-TLDNDIYLRFQSFNSESELENSI-KEKCPSKIDIGPVYSVDPAKRHAYAQGGD 113
+RE + +L++ YLR SF L + I K P + +P+ + A+G
Sbjct: 22 KREIALESLEDGAYLRHLSFAYMDRLYDYILNNKTPLHLYYSSALYENPSAQPMEAKGW- 80
Query: 114 NVFAPVERELIFDIDITDYD---DVRYCCSGADVCLECWP-----------LMTVAIKVI 159
+ ELIFDID Y + Y C + P + V+ I
Sbjct: 81 -----IGSELIFDIDADKYQGCSESYYICVKDNQVFNAKPDSCESGGKPLEIPLVSWNCI 135
Query: 160 DTALRD----------DFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVY 209
AL+D D GF + +SG RG H + D L +E+R IADY
Sbjct: 136 KRALQDAVKLRDILMTDLGFKDVKIFFSGNRGFHVRISDEAVLALNSEERRLIADYVSC- 194
Query: 210 KGNENSNKKVSFP 222
EN +++ FP
Sbjct: 195 ---ENLDQERVFP 204
>gi|313125916|ref|YP_004036186.1| DNA primase small subunit [Halogeometricum borinquense DSM 11551]
gi|448285757|ref|ZP_21476996.1| DNA primase small subunit [Halogeometricum borinquense DSM 11551]
gi|312292281|gb|ADQ66741.1| DNA primase small subunit [Halogeometricum borinquense DSM 11551]
gi|445575787|gb|ELY30250.1| DNA primase small subunit [Halogeometricum borinquense DSM 11551]
Length = 385
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 120/327 (36%), Gaps = 44/327 (13%)
Query: 56 RREFSF---TLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGG 112
RRE+ + + +R QS L + + P + DP +G
Sbjct: 30 RREWGYIPWSAGGTTMVRHQSLLDIGNLGDFLTRTAPQHVYFSAARFNDPGAGTMDEKGW 89
Query: 113 DNVFAPVERELIFDIDITDYDDVR-YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDH 171
+ +L+FD+D V S AD+ C + + +++ +DF F
Sbjct: 90 QSA------DLVFDLDADHLPGVDPETTSYADMLAACKDDLLSLLDILE----NDFDFTD 139
Query: 172 ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVY----------KGNENSNKKVSF 221
V+SG RG H V D R L ++ R I DY R + N + ++V
Sbjct: 140 TQVVFSGGRGYHVHVRDENVRELDSDARREIVDYVRAIDLDVEGLIGTESNRGTTRRV-- 197
Query: 222 PGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQEN 281
+R + + L L++NL EE E L + EL+G E
Sbjct: 198 --------LRRHGGWGARVHDRLLELAENLREMEE--EAALERL------QELQG-IGEG 240
Query: 282 RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLL 341
R + + N F + N G + EE V A T P +D V+ L+
Sbjct: 241 RAKTILGQIHNNFEAIREGNVEAGGPGTRILVNALAEEAVTAETAP-IDEPVTTDTKRLI 299
Query: 342 KAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+ P +H +G ++ + +FDP
Sbjct: 300 RLPGSLHGGSGLRVKTLERDEVADFDP 326
>gi|448391676|ref|ZP_21566771.1| DNA primase small subunit [Haloterrigena salina JCM 13891]
gi|445665088|gb|ELZ17766.1| DNA primase small subunit [Haloterrigena salina JCM 13891]
Length = 391
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDTYAEMLAKCKDALFRLLDFLEDDFGFEDLEVVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLHLDREHRREIVDYVR 176
>gi|448314296|ref|ZP_21503995.1| DNA primase small subunit [Natronolimnobius innermongolicus JCM
12255]
gi|445595408|gb|ELY49517.1| DNA primase small subunit [Natronolimnobius innermongolicus JCM
12255]
Length = 391
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYAEMLAKCKDALLRLLDFLEDDFGFEDLEVVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDESVLHLEREHRREIVDYVR 176
>gi|435847163|ref|YP_007309413.1| DNA primase small subunit [Natronococcus occultus SP4]
gi|433673431|gb|AGB37623.1| DNA primase small subunit [Natronococcus occultus SP4]
Length = 391
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L +DF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDSYAEMLATCKDALLRLLDFLENDFAFEELEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D R L E R I DY R
Sbjct: 151 YHVHVRDESVRHLDREHRREIVDYVR 176
>gi|448317573|ref|ZP_21507123.1| DNA primase small subunit [Natronococcus jeotgali DSM 18795]
gi|445602964|gb|ELY56934.1| DNA primase small subunit [Natronococcus jeotgali DSM 18795]
Length = 391
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDSYAEMLATCKDALLRLLDFLEDDFAFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D R L E R + DY R
Sbjct: 151 YHVHVRDESIRHLDREHRREVVDYVR 176
>gi|257388524|ref|YP_003178297.1| DNA primase, small subunit [Halomicrobium mukohataei DSM 12286]
gi|257170831|gb|ACV48590.1| DNA primase, small subunit [Halomicrobium mukohataei DSM 12286]
Length = 392
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 100/255 (39%), Gaps = 23/255 (9%)
Query: 122 ELIFDIDITDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
+L+FD+D V S A + +C + ++++D L +DFGF+ + V+SG R
Sbjct: 94 DLVFDLDADHLPAVELGEDSYAQMLAKCKDAL---LRLLDF-LENDFGFEDLTVVFSGGR 149
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREF 240
G H V D ++L + R I DY R + F + V R
Sbjct: 150 GYHVHVRDAGIQQLERDARREIVDYVR--------GIGLEFEQLVDEEAVAGTAG--RSS 199
Query: 241 FEEKLLLSQNLFSTEERYEKILSMIPD--ESVTSELRGKWQENRRSSNSKEDINFFRWEQ 298
+K LS + + ++S++ D E + E K Q
Sbjct: 200 PAQKRTLSTEGGWSRRAHRHVMSVVDDLLERDEEAAIERLMEYEGIGEGKATAALSAARQ 259
Query: 299 LKNTLQSGKQKV-----QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGR 353
+ L +G V Q + + E+V P +D V+ N L++ P +H +G
Sbjct: 260 NYDQLAAGNIDVHPAFFQIAKPLMTEVVAMDNAP-IDEPVTTDTNRLIRLPGSLHGGSGL 318
Query: 354 VCIPIDPKDCEEFDP 368
I+ D +EFDP
Sbjct: 319 EVRRIERDDIDEFDP 333
>gi|409096673|ref|ZP_11216697.1| DNA primase small subunit [Thermococcus zilligii AN1]
Length = 350
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 114/321 (35%), Gaps = 75/321 (23%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R +F+ +LE+ ++ P I DP + + + EL+FDID
Sbjct: 51 RKNTFSDIRDLEDYVRATSPYAIFSSVALYEDPREMGGW----------IGAELVFDIDA 100
Query: 130 TDYDDVRYCCS---GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
D +R C VC C K L++DFG + + VYSG RG H +
Sbjct: 101 KDLP-LRRCLQVHPSGQVCPVCLEDAKELAKDTLVILKEDFGLEEVHVVYSG-RGYHIRI 158
Query: 187 CDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLL 246
D A L ++ R I Y ++ ++++F + +++
Sbjct: 159 LDDWAMNLDHKAREKILAYV-------SAAEEITF----------------EDLQSRRIM 195
Query: 247 LSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSG 306
LS F LR + R + N +I FR Q+++ L+
Sbjct: 196 LSSGYFR-----------------VFRLRFGYFIRRINENHLRNIG-FRKNQVESLLEKR 237
Query: 307 KQKVQGLRRCVEEIVF-----------------AFTYPRLDMEVSKHRNHLLKAPFCVHP 349
++ +G R F F+ D +V+ +L+ P +H
Sbjct: 238 EELYEGFVRNALLTAFPQGIGQRGILKLFALSSTFSKAYFDGKVTIDVKRILRVPSSLHS 297
Query: 350 KTGRVCIPI--DPKDCEEFDP 368
K G V I D E+FDP
Sbjct: 298 KVGFVATYIGQDESKLEKFDP 318
>gi|222444686|ref|ZP_03607201.1| hypothetical protein METSMIALI_00299, partial [Methanobrevibacter
smithii DSM 2375]
gi|222434251|gb|EEE41416.1| putative DNA primase small subunit, partial [Methanobrevibacter
smithii DSM 2375]
Length = 151
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 24/134 (17%)
Query: 56 RREFSFTLD----NDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQG 111
+REF F + ND R++ F L+ ++ K P I + +P +R + +
Sbjct: 33 KREFGFDHNGKGPND---RYKVFRGRESLKKFLRYKAPFAAYISVAFYNNPRRREDWQKA 89
Query: 112 GDNVFAPVERELIFDIDITDYDDVRYC-CSGA-DVCLECWPLMTVAIKVIDTALRDDFGF 169
E IFD+D D +R C C G +VCL + + +IDT L+DD G
Sbjct: 90 ----------EYIFDVDAKDIP-IRSCQCDGVCEVCLG--QALEIVNSLIDT-LQDDLGL 135
Query: 170 DHILWVYSGRRGVH 183
++I VYSG RG H
Sbjct: 136 NNIHLVYSG-RGYH 148
>gi|3342819|gb|AAC27713.1| primase small subunit homolog [thermophilic archaeon
'Bonch-Osmolovskaya']
Length = 357
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 101/258 (39%), Gaps = 32/258 (12%)
Query: 122 ELIFDIDITDYDDVR--YCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGR 179
EL+FDID D R + VC C + L++DFGF+ + +YSG
Sbjct: 93 ELVFDIDAKDLPLRRCQHIHEHGKVCPICLEDAKELARDTLIVLKEDFGFESVHVIYSG- 151
Query: 180 RGVHC-------WVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRS 232
RG H W DGKAR A + YK + SNK + G F +R
Sbjct: 152 RGYHIRVLDDWRWPSDGKAREKILAYVSAAEEL--DYKKDVQSNKIMLSSGYYRVFRIR- 208
Query: 233 YTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDIN 292
+ L+ E L +N +E++ + +L I ++ + N +S N I
Sbjct: 209 FGYFLKRISENHL---RNFGLSEKQIKDVLENI------DKIYNDFVLNAKSPN----IA 255
Query: 293 FFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTG 352
F L+ + G K + F+ Y D V+ +L+ P +H K G
Sbjct: 256 F--PSSLRRPPKKGLHKSGLMILLNSSSTFSKAY--FDGRVTVDVKRILRLPSSLHSKVG 311
Query: 353 RVCIPIDPKD--CEEFDP 368
+ I P + E F+P
Sbjct: 312 FITTYIGPDEGKLERFNP 329
>gi|284165835|ref|YP_003404114.1| DNA primase, small subunit [Haloterrigena turkmenica DSM 5511]
gi|284015490|gb|ADB61441.1| DNA primase, small subunit [Haloterrigena turkmenica DSM 5511]
Length = 391
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYAEMLAKCKDALFRLLGFLEDDFGFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLHLDREHRREIVDYVR 176
>gi|354610708|ref|ZP_09028664.1| DNA primase small subunit [Halobacterium sp. DL1]
gi|353195528|gb|EHB61030.1| DNA primase small subunit [Halobacterium sp. DL1]
Length = 391
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DFGF+ + +SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDTYAEMLAKCKDALYRLLDFLERDFGFEDLTVTFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNE 213
H V D L EQR I DY R GNE
Sbjct: 151 YHVHVRDPGVYELEREQRREIVDYVR---GNE 179
>gi|171186132|ref|YP_001795051.1| DNA primase, small subunit [Pyrobaculum neutrophilum V24Sta]
gi|226705024|sp|B1YAF6.1|PRIS_THENV RecName: Full=Probable DNA primase small subunit
gi|170935344|gb|ACB40605.1| DNA primase, small subunit [Pyrobaculum neutrophilum V24Sta]
Length = 312
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 56 RREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
+REF+F +R ++F S EL EK P + Y P + +G
Sbjct: 24 KREFAFQPFGGGMVRHKAFKSVEELRRFAVEKTPRHMYHSSAYYERPDEGDMERKGW--- 80
Query: 116 FAPVERELIFDIDITDYDDVRYCCSGADVCLECW-PLMTVAIKVIDTALRDDFGFDHILW 174
+ +LIFDID D+ D C V + C A K++D R+ G
Sbjct: 81 ---LGADLIFDID-GDHLDTEACRESKLVSIACLNDAREEANKLLDVLTRE-LGLKPRRI 135
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRV 208
V+SG RG H V D + L +R + +Y +
Sbjct: 136 VFSGNRGFHVHVADEEVLALGARERRELVNYLKA 169
>gi|397772860|ref|YP_006540406.1| DNA primase, small subunit [Natrinema sp. J7-2]
gi|397681953|gb|AFO56330.1| DNA primase, small subunit [Natrinema sp. J7-2]
Length = 442
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A++ + L +DF F+ + V+SG RG
Sbjct: 145 DLVFDLDA---DHLPSVTLGEDSYGEMLATCQDALRRLLDFLENDFAFEDLEIVFSGGRG 201
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 202 YHVHVRDSNVLHLEREHRREIVDYVR 227
>gi|448400347|ref|ZP_21571339.1| DNA primase small subunit, partial [Haloterrigena limicola JCM
13563]
gi|445667370|gb|ELZ20013.1| DNA primase small subunit, partial [Haloterrigena limicola JCM
13563]
Length = 266
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDF F+++ V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYAEMLAKCKDALGRLLEFLEDDFAFENLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLHLEREHRREIVDYVR 176
>gi|448303006|ref|ZP_21492956.1| DNA primase small subunit [Natronorubrum sulfidifaciens JCM 14089]
gi|445594013|gb|ELY48180.1| DNA primase small subunit [Natronorubrum sulfidifaciens JCM 14089]
Length = 391
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYAEMLAKCKDALWRLLDFLEDDFGFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLHLEREHRREIVDYVR 176
>gi|448322490|ref|ZP_21511960.1| DNA primase small subunit [Natronococcus amylolyticus DSM 10524]
gi|445601248|gb|ELY55237.1| DNA primase small subunit [Natronococcus amylolyticus DSM 10524]
Length = 391
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDSYAEMLATCKDALLRLLDFLEDDFAFEELEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D R E R + DY R
Sbjct: 151 YHVHVRDESIRHFDREHRREVVDYVR 176
>gi|448340545|ref|ZP_21529516.1| DNA primase small subunit [Natrinema gari JCM 14663]
gi|445629978|gb|ELY83248.1| DNA primase small subunit [Natrinema gari JCM 14663]
Length = 391
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A++ + L +DF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYGEMLATCQDALRRLLDFLENDFAFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDSNVLHLEREHRREIVDYVR 176
>gi|337285114|ref|YP_004624588.1| DNA primase small subunit [Pyrococcus yayanosii CH1]
gi|334901048|gb|AEH25316.1| DNA primase small subunit [Pyrococcus yayanosii CH1]
Length = 345
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 47 PACDKSYFGRREFSFTLDND-IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKR 105
PA RREF F + R S++ +LE+ IK P + SV +R
Sbjct: 25 PAFILETLERREFGFDHTGEGPSDRKNSYSDIRDLEDYIKATAPYAV----YSSVALYER 80
Query: 106 HAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRD 165
+ +G EL+FDID D R VC C + T LR+
Sbjct: 81 PSEMEGWLGT------ELVFDIDAKDLPLKRCNHEPGTVCPICLNDARELARDTLTVLRE 134
Query: 166 DFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQR 199
D GF+ I VYSG RG H + D A +L + R
Sbjct: 135 DLGFEDIHVVYSG-RGYHIRILDEWALKLDAKAR 167
>gi|212224928|ref|YP_002308164.1| DNA primase small subunit [Thermococcus onnurineus NA1]
gi|226705025|sp|B6YV39.1|PRIS_THEON RecName: Full=Probable DNA primase small subunit
gi|212009885|gb|ACJ17267.1| eukaryotic-type DNA primase, small subunit [Thermococcus onnurineus
NA1]
Length = 346
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 110/321 (34%), Gaps = 75/321 (23%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R F +LE+ IK P I DP + EL+FDID
Sbjct: 51 RKNVFMDVRDLEDYIKATAPYAIYSSVALYEDPKGMSGWLGA----------ELVFDIDA 100
Query: 130 TDYDDVRYCC---SGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV 186
D +R C VC C + L++DFGF+ + VYSG RG H V
Sbjct: 101 KDLP-LRRCGHIHEHGKVCPICLGDAKELARDTLVILKEDFGFEDVHVVYSG-RGYHIRV 158
Query: 187 CDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLL 246
D A +L ++ R I Y ++ ++V+F + K++
Sbjct: 159 LDDWAIQLDSKSREKILAYI-------SAAEEVTF----------------EDIQSRKIM 195
Query: 247 LSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSG 306
LS F LR + R + N +I R Q+K L+S
Sbjct: 196 LSSGYFR-----------------VFRLRFGYFIARANENHLLNIG-LRKGQVKKILESR 237
Query: 307 KQKVQGLRRCVEEIVF-----------------AFTYPRLDMEVSKHRNHLLKAPFCVHP 349
+ +G R F F+ D V+ +L+ P +H
Sbjct: 238 DEIYEGFVRKGLLTAFPQGIGYKTLARLFALSSTFSKAYFDGRVTVDVKRILRVPSSLHS 297
Query: 350 KTGRVCIPI--DPKDCEEFDP 368
K G V I D + E+F+P
Sbjct: 298 KVGLVATYIGSDERKLEKFNP 318
>gi|288932148|ref|YP_003436208.1| DNA primase, small subunit [Ferroglobus placidus DSM 10642]
gi|288894396|gb|ADC65933.1| DNA primase, small subunit [Ferroglobus placidus DSM 10642]
Length = 355
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 118/323 (36%), Gaps = 63/323 (19%)
Query: 57 REFSFT----LDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGG 112
RE++F L I R +F+S EL+ I P + Y P + A+G
Sbjct: 31 REWAFVEVEALPEFIMRRHIAFDSYVELKGFILNNVPLHVYYSSAYYEKPDAENMEAKGW 90
Query: 113 DNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHI 172
+LIFDID + +G+ IK++ L +DFG +
Sbjct: 91 KKA------DLIFDIDAD------HLPNGS------LKEAKRQIKMLYDVLEEDFGCKDM 132
Query: 173 LWVYSGRRGVHCWVCDGKARRLTNEQRGAIADY-----FRVYKGNENSNKKVSFPGPLHP 227
V+SG RG H V D L++ +R I DY F+ + S + G +
Sbjct: 133 EIVFSGSRGYHLHVHDEDFLELSSAERREIVDYLFLTDFKFSRKLPESKQSYRIAGIMAG 192
Query: 228 FLVRSYTE-VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSN 286
+ + + +RE F + E+ EK+L +E V
Sbjct: 193 EIEEALKKGKIRELFPK----------ISEKREKMLLAAAEEVV---------------- 226
Query: 287 SKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFC 346
E + ++ TL K+ + + E + +D V+ L++ P
Sbjct: 227 --EKVKNLNFDHFPKTLD--KELARLFNKAAERVRI-----HVDPPVTADVKRLIRLPGS 277
Query: 347 VHPKTGRVCIPIDPKDCEEFDPT 369
+H KTG I + +EF PT
Sbjct: 278 LHGKTGLKVCKISRDEIDEFKPT 300
>gi|448739289|ref|ZP_21721304.1| DNA primase small subunit [Halococcus thailandensis JCM 13552]
gi|445799884|gb|EMA50253.1| DNA primase small subunit [Halococcus thailandensis JCM 13552]
Length = 392
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + GAD E A+ + L +DFGF + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVELGADSYKEMLEKCKAALLRLLDFLENDFGFRDLTIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D + L ++ R I DY R
Sbjct: 151 YHVHVRDAGVQPLESDARREIVDYVR 176
>gi|116753734|ref|YP_842852.1| DNA primase small subunit [Methanosaeta thermophila PT]
gi|121692799|sp|A0B688.1|PRIS_METTP RecName: Full=Probable DNA primase small subunit
gi|116665185|gb|ABK14212.1| DNA primase small subunit [Methanosaeta thermophila PT]
Length = 395
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 125/342 (36%), Gaps = 62/342 (18%)
Query: 57 REFSFTL-DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDP---AKRHAYAQGG 112
RE+ F D R +SF S EL + I+ P+ + Y + P + +G
Sbjct: 31 REWGFIFYDTPGMRRHRSFRSRKELVDYIRSTVPAHVYHSAAYYLKPDAPTMKEKIWKGA 90
Query: 113 DNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDH- 171
D LIFD+D + Y SG E + + L DFGFD
Sbjct: 91 D---------LIFDLDADHLAE--YRGSGIRDFREMLERVKGETMKLLEFLLSDFGFDER 139
Query: 172 -ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFR---------VYK----GNENSNK 217
I +SG RG H V D +L ++ R I DY ++K G+ +
Sbjct: 140 MISVAFSGGRGYHIHVRDKSVLKLRSDARREIVDYLTGRGLDPERFIHKIGVDGDAGVER 199
Query: 218 KVSFPGPLHPF---------LVRSYTEVLREF-FEEKLLLSQNLFSTEERYEKI-LSMIP 266
S GP + S LRE EE L L +N+ ++ ++ LS I
Sbjct: 200 ARSLRGPASDAPGWGGRINKAIESMVMHLRELDDEEALRLLKNVKGIGKQKARLFLSQIR 259
Query: 267 DESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTY 326
+E+ +R +++FF+ SG + + +EE V A
Sbjct: 260 EENAIKSIRAG------------NLDFFKH-------ASGIWNLI-IPYIMEETVRALG- 298
Query: 327 PRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
D V+ + L++ P +H TG + FDP
Sbjct: 299 GETDEPVTADVHRLIRFPESLHGGTGLRVTSLSINSLHAFDP 340
>gi|47179087|emb|CAG14371.1| unnamed protein product [Tetraodon nigroviridis]
Length = 106
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINF- 293
+V+ ++F L Q++ +E EK+L+++PD+ + L + +N K I+F
Sbjct: 7 KVVEKYFTPYALHEQDVLGRKESVEKVLALVPDDILFLHLFLL----DKGTNRKNSIHFC 62
Query: 294 -FRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNH 339
+ TL +K Q + EI+ + YPRLD+ VSK NH
Sbjct: 63 LIICDSFDLTLTFTAKKGQHFEK---EIMLQYCYPRLDVNVSKGVNH 106
>gi|296109794|ref|YP_003616743.1| DNA primase, small subunit [methanocaldococcus infernus ME]
gi|295434608|gb|ADG13779.1| DNA primase, small subunit [Methanocaldococcus infernus ME]
Length = 340
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 21/161 (13%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
REF++ +N + R SF+SE E ++ + P + Y P A +G ++
Sbjct: 30 REFAYGYENKVDNRNLSFSSEKEYKSWVLRYTPYHLYKSLAYMKYPKNSGAKNKG---IY 86
Query: 117 APVERELIFDIDITDYDDVRYCCSGAD--VCLECW-PLMTVAIKVIDTALRDDFGF--DH 171
REL FDID + C D +C C AI +I+ L +DFG +
Sbjct: 87 G---RELAFDIDAHKTEK----CEHRDDWICKYCLDSAKRQAIYLIEEFLFEDFGLSEED 139
Query: 172 ILWVYSGRRGVHCWV------CDGKARRLTNEQRGAIADYF 206
I +SG RG H ++ K + + +R I +Y
Sbjct: 140 IKIAFSGNRGYHIYIKPKDIEVKKKIEKYSKNERRVILNYI 180
>gi|433434290|ref|ZP_20407985.1| DNA primase small subunit [Haloferax sp. BAB2207]
gi|432192794|gb|ELK49614.1| DNA primase small subunit [Haloferax sp. BAB2207]
Length = 302
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 79/200 (39%), Gaps = 22/200 (11%)
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYT 234
V+SG RG H V D R L +E R I DY R + ++ + G ++R+
Sbjct: 60 VFSGGRGYHVHVRDESVRGLDSEARREIVDYIRAIDLDFDALIETRQHGTTTQRVLRTEG 119
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
R L L EE + LS + EL G +K + F
Sbjct: 120 GWGRRTHRRLLDFVDALLEMEE--DAALSRL------KELDGIGD-----GRAKTILGAF 166
Query: 295 RWEQLKNTLQSGKQKVQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVH 348
R + ++ G + G+R VE E V T P +D V+ L++ P +H
Sbjct: 167 RNN--PDAVREGNVEAGGPGVRTLVEALAHETVEDQTSP-IDEPVTTDTKRLIRLPKSLH 223
Query: 349 PKTGRVCIPIDPKDCEEFDP 368
+G V P+D D + FDP
Sbjct: 224 GGSGLVVEPLDRDDIDGFDP 243
>gi|448600758|ref|ZP_21656137.1| DNA primase small subunit [Haloferax alexandrinus JCM 10717]
gi|445734771|gb|ELZ86327.1| DNA primase small subunit [Haloferax alexandrinus JCM 10717]
Length = 385
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 79/200 (39%), Gaps = 22/200 (11%)
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYT 234
V+SG RG H V D R L +E R I DY R + ++ + G ++R+
Sbjct: 143 VFSGGRGYHVHVRDESVRGLDSEARREIVDYIRAIDLDFDALIETRQHGTTTQRVLRTEG 202
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
R L L EE + LS + EL G +K + F
Sbjct: 203 GWGRRTHRRLLDFVDALLEMEE--DAALSRL------KELDGIGD-----GRAKTILGAF 249
Query: 295 RWEQLKNTLQSGKQKVQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVH 348
R + ++ G + G+R VE E V T P +D V+ L++ P +H
Sbjct: 250 R--NNPDAVREGNVEAGGPGVRTLVEALAHETVEDQTSP-IDEPVTTDTKRLIRLPKSLH 306
Query: 349 PKTGRVCIPIDPKDCEEFDP 368
+G V P+D D + FDP
Sbjct: 307 GGSGLVVEPLDRDDIDGFDP 326
>gi|448330842|ref|ZP_21520118.1| DNA primase small subunit [Natrinema versiforme JCM 10478]
gi|445610678|gb|ELY64447.1| DNA primase small subunit [Natrinema versiforme JCM 10478]
Length = 391
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPGVTLGEDSYAEMLAQCKDALLRLLDFLEDDFAFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDTNVLELDREHRREIVDYVR 176
>gi|14520400|ref|NP_125875.1| DNA primase small subunit [Pyrococcus abyssi GE5]
gi|13878646|sp|Q9V292.1|PRIS_PYRAB RecName: Full=DNA primase small subunit; AltName: Full=DNA primase
41 kDa subunit; Short=p41
gi|5457615|emb|CAB49106.1| DNA primase [Pyrococcus abyssi GE5]
gi|380740924|tpe|CCE69558.1| TPA: DNA primase small subunit [Pyrococcus abyssi GE5]
Length = 345
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 11/136 (8%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R S+ +LE+ IK P + + P + + EL+FDID
Sbjct: 49 RKNSYTDVRDLEDYIKATAPYAVYSSVAFYEKPQEMEGWLGA----------ELVFDIDA 98
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
D R VC C + L+++ GF+ + VYSG RG H V DG
Sbjct: 99 KDLPLRRCNHEPGKVCPICLNDAKEIARDTLIVLKEELGFEDVHVVYSG-RGYHIRVMDG 157
Query: 190 KARRLTNEQRGAIADY 205
A L ++ R I +
Sbjct: 158 WALSLDSKSRERILSF 173
>gi|322368822|ref|ZP_08043389.1| DNA primase, small subunit [Haladaptatus paucihalophilus DX253]
gi|320551553|gb|EFW93200.1| DNA primase, small subunit [Haladaptatus paucihalophilus DX253]
Length = 390
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 51/268 (19%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D V AD+ C + + L DFGF+ + V+SG RG
Sbjct: 94 DLVFDLDADHLPGVTPETPYADMLARC----KEELLDLLDILERDFGFEDMTIVFSGGRG 149
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYK---------------GNENSNKKVSFP---- 222
H V D + L E R I DY R G +N +K + P
Sbjct: 150 YHVHVRDEDVKGLDREGRREIVDYVRAGDVDFESLVQSETVAGIGLKNPTQKRTLPTSGG 209
Query: 223 --GPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQE 280
G +H + + F ++ LLS + ER ++ D + + +G +
Sbjct: 210 WGGRVHAY--------VNSFVDD--LLSMDEADALERLQEF-----DGIGSGKAKGAYNA 254
Query: 281 NRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHL 340
++N++ +I+ + Q L R + + VFA +D V+ + L
Sbjct: 255 ---ATNNRREIDRGNVDVHPAFYQ--------LARILADDVFAAESAAVDEPVTTDTHRL 303
Query: 341 LKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
++ P +H +G I ++FDP
Sbjct: 304 IRLPGSLHGGSGLEVTRIPRDGLDDFDP 331
>gi|448346296|ref|ZP_21535182.1| DNA primase small subunit [Natrinema altunense JCM 12890]
gi|445632885|gb|ELY86091.1| DNA primase small subunit [Natrinema altunense JCM 12890]
Length = 391
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A++ + L +DF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYGEMLAKCQDALRRLLEFLENDFAFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLHLEREHRREIVDYVR 176
>gi|448337153|ref|ZP_21526235.1| DNA primase small subunit [Natrinema pallidum DSM 3751]
gi|445626499|gb|ELY79842.1| DNA primase small subunit [Natrinema pallidum DSM 3751]
Length = 391
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A++ + L +DF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYGEMLAKCQDALRRLLEFLENDFAFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLHLEREHRREIVDYVR 176
>gi|240102400|ref|YP_002958709.1| DNA primase small subunit [Thermococcus gammatolerans EJ3]
gi|239909954|gb|ACS32845.1| DNA primase small subunit (priA) [Thermococcus gammatolerans EJ3]
Length = 341
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 122 ELIFDIDITDYDDVRYCCS---GADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSG 178
EL+FDID D +R C VC C + T L++DFGF+ I VYSG
Sbjct: 92 ELVFDIDAKDLP-LRRCMDLHPSGQVCPLCLEDAKELVLDTLTILKEDFGFEEIHVVYSG 150
Query: 179 RRGVHCWVCDGKARRLTNEQRGAIADY 205
RG H V D L ++ R I Y
Sbjct: 151 -RGYHIRVLDDWVLDLDSKAREKILAY 176
>gi|448546190|ref|ZP_21626442.1| DNA primase small subunit [Haloferax sp. ATCC BAA-646]
gi|448548189|ref|ZP_21627533.1| DNA primase small subunit [Haloferax sp. ATCC BAA-645]
gi|448557376|ref|ZP_21632649.1| DNA primase small subunit [Haloferax sp. ATCC BAA-644]
gi|445703033|gb|ELZ54969.1| DNA primase small subunit [Haloferax sp. ATCC BAA-646]
gi|445714271|gb|ELZ66035.1| DNA primase small subunit [Haloferax sp. ATCC BAA-644]
gi|445714891|gb|ELZ66649.1| DNA primase small subunit [Haloferax sp. ATCC BAA-645]
Length = 385
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 22/200 (11%)
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYT 234
V+SG RG H V D R L +E R I DY R + ++ + G ++R+
Sbjct: 143 VFSGGRGYHVHVRDESVRGLDSEARREIVDYIRAIDLDFDALIETRQHGTTTQRVLRTEG 202
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
R L L EE + LS + EL G +K + F
Sbjct: 203 GWGRRTHRRLLDFVDALLEMEE--DAALSRL------KELDGIGD-----GRAKTILGAF 249
Query: 295 RWEQLKNTLQSGKQKVQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVH 348
R + ++ G + G+R VE E V T P +D V+ L++ P +H
Sbjct: 250 R--NNPDAVREGNVEAGGPGVRTLVEALAHETVEDQTSP-IDEPVTTDTKRLIRLPKSLH 306
Query: 349 PKTGRVCIPIDPKDCEEFDP 368
+G V P+D + ++FDP
Sbjct: 307 GGSGLVVEPLDRDEIDDFDP 326
>gi|448410857|ref|ZP_21575485.1| DNA primase small subunit [Halosimplex carlsbadense 2-9-1]
gi|445671173|gb|ELZ23766.1| DNA primase small subunit [Halosimplex carlsbadense 2-9-1]
Length = 386
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 102/253 (40%), Gaps = 25/253 (9%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A++ + L DDFGFD V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYAEMLAKCKDALRRLLDFLDDDFGFDDTTVVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFF 241
H V D + L ++ R I DY R +E + G + +V + R
Sbjct: 151 YHVHVRDEAVQDLGSDARREIVDYVRGIGLDEEYVQTSEMRGGVSRRVVETEGGWGRRVH 210
Query: 242 EEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKN 301
E L E +++L+M DE T+ LR E + D + E
Sbjct: 211 ERLL----------EFVDELLAM-GDEEATARLR----ELDGIGEGRADTIYGALESNAE 255
Query: 302 TLQSGKQKVQG------LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
L++G ++ G L V+E+V P +D V+ N L++ P +H +
Sbjct: 256 ALEAGNVELGGVGLRTLLDAFVDEVVEEQNAP-IDEPVTTDVNRLIRLPGSLHGGSALEV 314
Query: 356 IPIDPKDCEEFDP 368
ID + FDP
Sbjct: 315 QRIDRAALDAFDP 327
>gi|336252171|ref|YP_004595278.1| DNA primase small subunit [Halopiger xanaduensis SH-6]
gi|335336160|gb|AEH35399.1| DNA primase small subunit [Halopiger xanaduensis SH-6]
Length = 391
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L +DF F ++ V+SG RG
Sbjct: 94 DLVFDLDA---DHLPNVTLGEDSYAEMLAKCKDALLRLLDFLENDFAFQNMEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDANVLELEREHRREIVDYVR 176
>gi|448306214|ref|ZP_21496123.1| DNA primase small subunit [Natronorubrum bangense JCM 10635]
gi|445598628|gb|ELY52683.1| DNA primase small subunit [Natronorubrum bangense JCM 10635]
Length = 391
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L +DFGF+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYGEMLAKCKDALCRLLEFLEEDFGFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLHLEREHRREIVDYVR 176
>gi|118431046|ref|NP_147231.2| DNA primase small subunit [Aeropyrum pernix K1]
gi|150421633|sp|Q9YEZ8.2|PRIS_AERPE RecName: Full=Probable DNA primase small subunit
gi|116062372|dbj|BAA79398.2| DNA primase small subunit [Aeropyrum pernix K1]
Length = 342
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 57 REFSFTL-DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNV 115
REF+F L D D+Y+R F+S EL + + + P P R +G
Sbjct: 33 REFAFQLFDGDVYVRHIGFDSMEELLSYMAREAPKNAYYSVARYSLPTARSMEEKGW--- 89
Query: 116 FAPVERELIFDIDITDYDDVRYCCSG-ADVCLECWPLMTVAIKVIDTALRDDFGFDHILW 174
+ EL+FDID+ D + C D CL A+++++ AL DFG L+
Sbjct: 90 ---LGSELMFDIDV---DSLEGCGEVLGDSCLSRG--YKQAVRLVE-ALYRDFGVPSTLY 140
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYF 206
++G RG H G RRL E+R IA YF
Sbjct: 141 -FTGNRGFHVLADCGWCRRLGREERREIARYF 171
>gi|333911032|ref|YP_004484765.1| DNA primase small subunit [Methanotorris igneus Kol 5]
gi|333751621|gb|AEF96700.1| DNA primase small subunit [Methanotorris igneus Kol 5]
Length = 345
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 10/133 (7%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
REF + + R SF E E +N + + P + Y P K GG N
Sbjct: 33 REFGYGYFKKVDNRNISFKDEEEYKNWVLKNAPFHLYKSLSYMEFPDK-----SGGANKK 87
Query: 117 APVERELIFDIDITDYDDVRYCCSGADVCLECW-PLMTVAIKVIDTALRDDFGF--DHIL 173
RE+ FDID+ + R+ S VC +C AI +I+ L DFG + +
Sbjct: 88 KVFRREIAFDIDVHKTNKCRH--SDDWVCDKCLNAAKEQAIYLIEEFLMPDFGLSKEDLQ 145
Query: 174 WVYSGRRGVHCWV 186
+SG RG H ++
Sbjct: 146 IAFSGNRGYHIYI 158
>gi|383621917|ref|ZP_09948323.1| DNA primase small subunit [Halobiforma lacisalsi AJ5]
gi|448702843|ref|ZP_21700200.1| DNA primase small subunit [Halobiforma lacisalsi AJ5]
gi|445776936|gb|EMA27912.1| DNA primase small subunit [Halobiforma lacisalsi AJ5]
Length = 391
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 96/263 (36%), Gaps = 40/263 (15%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DDF F+ V+SG RG
Sbjct: 94 DLVFDLDA---DHLPTVTLGEDSYAEMLSKCKDALFRLLDFLEDDFAFEDTEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFRVYKGNE----NSNKKVSFPGPLHPFLVRSY---- 233
H V D L E R I DY R G E + V+ G P R+
Sbjct: 151 YHVHVRDENVLDLEREHRREIVDYVRGI-GLEFEELIETETVAGLGRKTPTERRTLRVEG 209
Query: 234 ---TEVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKED 290
+ R F E L + EE L + + E + K N +N
Sbjct: 210 GWGRRIHRHFME----FVDELLAMEE--SAALERLQEFDGIGEGKAKATLNAARNN---- 259
Query: 291 INFFRWEQLKNTLQSGKQKV-----QGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPF 345
+ L++G V Q R E V P +D V+ N L++ P
Sbjct: 260 ---------REGLEAGNVTVHTAVAQLAERFAETAVERDNAP-IDEPVTTDTNRLIRLPG 309
Query: 346 CVHPKTGRVCIPIDPKDCEEFDP 368
+H +G + ++ + E+FDP
Sbjct: 310 SLHGGSGLETVRLERDELEDFDP 332
>gi|298675853|ref|YP_003727603.1| DNA primase small subunit [Methanohalobium evestigatum Z-7303]
gi|298288841|gb|ADI74807.1| DNA primase, small subunit [Methanohalobium evestigatum Z-7303]
Length = 391
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 54 FGRREFSFTLDND----IYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYA 109
+ RE+ F L +D + R +F S EL++ P+ Y P +
Sbjct: 28 YTSREWGFILFDDMPKTVMRRHMAFGSSGELQDYFAWTVPAHAYYSVAYYEYPNASNMKD 87
Query: 110 QGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF 169
+ ++ +LIFD+D D + + LE + A+K+ D L DDFGF
Sbjct: 88 KNW------LQSDLIFDLDA---DHLPHVPDSYPEMLEN--VKQEALKLYDF-LSDDFGF 135
Query: 170 --DHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF 206
D I V+SG RG H + R L + +R I DY
Sbjct: 136 GEDDINIVFSGGRGYHFHISHPSVRSLGSAERREIVDYI 174
>gi|327310135|ref|YP_004337032.1| DNA primase-like protein [Thermoproteus uzoniensis 768-20]
gi|326946614|gb|AEA11720.1| DNA primase related protein [Thermoproteus uzoniensis 768-20]
Length = 323
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 45 RHPACDKSYFGRREFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAK 104
R+ D RRE + + +R +SF S +L + ++ P + P +
Sbjct: 15 RNAQLDVPEIERREVGYLTMDGAMVRHKSFRSLEDLRSFCVDRPPLGLYYSAALYERPDE 74
Query: 105 RHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADV----CLECWPLMTVAIKVID 160
+ A+G + +L+FDID D C G ++ CLE A+K++D
Sbjct: 75 KDMDAKGW------LGADLVFDIDGDHLDTPN--CRGMELLNYGCLEDAK--EEALKLLD 124
Query: 161 TALRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF 206
ALR++ G + L VYSG RG H V + R L +R + D+
Sbjct: 125 -ALRNELGLEG-LPVYSGHRGFHVHVRAEEVRGLDAGERRRLVDFL 168
>gi|448727360|ref|ZP_21709726.1| DNA primase small subunit [Halococcus morrhuae DSM 1307]
gi|445791574|gb|EMA42214.1| DNA primase small subunit [Halococcus morrhuae DSM 1307]
Length = 392
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 122 ELIFDIDITDYDDVRYCC-SGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
+L+FD+D V S + +C T ++++D L +DFGF + V+SG R
Sbjct: 94 DLVFDLDADHLPSVELGVDSYKQMLAKC---KTALLRLLDF-LENDFGFHDLTIVFSGGR 149
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFR 207
G H V D + L ++ R I DY R
Sbjct: 150 GYHVHVRDAGVQPLESDARREIVDYVR 176
>gi|292656816|ref|YP_003536713.1| DNA primase, eukaryotic-type small subunit [Haloferax volcanii DS2]
gi|448290816|ref|ZP_21481961.1| DNA primase small subunit [Haloferax volcanii DS2]
gi|291372097|gb|ADE04324.1| DNA primase, eukaryotic-type, small subunit [Haloferax volcanii
DS2]
gi|445577869|gb|ELY32289.1| DNA primase small subunit [Haloferax volcanii DS2]
Length = 385
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 22/200 (11%)
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYT 234
V+SG RG H V D R L +E R I DY R + ++ + G ++R+
Sbjct: 143 VFSGGRGYHVHVRDESVRSLDSEARREIVDYIRAIDLDFDALIETRQHGTTTQRVLRTEG 202
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
R L L EE + LS + EL G +K + F
Sbjct: 203 GWGRRTHRRLLDFVDALLEMEE--DAALSRL------KELDGIGD-----GRAKTVLGAF 249
Query: 295 RWEQLKNTLQSGKQKVQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVH 348
R + ++ G + G+R VE E V T P +D V+ L++ P +H
Sbjct: 250 R--NNPDAVREGNVEAGGPGVRTLVEALAHETVEDQTSP-IDEPVTTDTKRLIRLPKSLH 306
Query: 349 PKTGRVCIPIDPKDCEEFDP 368
+G V P+D + + FDP
Sbjct: 307 GGSGLVVEPLDRDEIDGFDP 326
>gi|330507642|ref|YP_004384070.1| DNA primase small subunit [Methanosaeta concilii GP6]
gi|328928450|gb|AEB68252.1| DNA primase small subunit [Methanosaeta concilii GP6]
Length = 395
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 21/156 (13%)
Query: 57 REFSFTLDNDIYLR-FQSFNSESELENSIKEKCPSKIDIGPVYSVDPAK---RHAYAQGG 112
RE+ F +D +R +SF S EL + ++ P + Y P + QG
Sbjct: 26 REWGFLFFDDSGMRRHKSFFSRGELVDYVRSMIPRHVYHSAAYYQRPGAPTMKEKIWQGA 85
Query: 113 DNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF--D 170
D LIFD+D D +R S LE T+ + + L DFGF
Sbjct: 86 D---------LIFDLDA---DHLRGAASSYAGMLEQVKRETLKLL---SFLLSDFGFAES 130
Query: 171 HILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF 206
I V+SG RG H V D + ++R + DY
Sbjct: 131 KISVVFSGGRGYHIHVRDPRIYSFGGDERREVVDYL 166
>gi|350525963|ref|YP_004885476.1| DNA primase small subunit [Thermococcus sp. AM4]
gi|345650782|gb|AEO14038.1| DNA primase small subunit [Thermococcus sp. AM4]
Length = 342
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 43/258 (16%)
Query: 122 ELIFDIDITDYDDVRYCCS---GADVCLECWPLMTVAIKVIDT--ALRDDFGFDHILWVY 176
EL+FDID D +R C VC C L V+DT L++DFGF+ I VY
Sbjct: 93 ELVFDIDAKDLP-LRRCIELHPSGQVCPLC--LEDAKELVLDTLRILKEDFGFEEIHVVY 149
Query: 177 SGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEV 236
SG RG H V D L + R I Y ++ ++V+F V+S
Sbjct: 150 SG-RGYHIRVLDDWVLDLDAKAREKILAYV-------SAAEEVTFED------VQS---- 191
Query: 237 LREFFEEKLLLSQNLFST-EERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
+++LS F R+ + I + + + K ++ + KE I
Sbjct: 192 ------RRIMLSAGYFRVFRLRFGYFIRRINLNHLLN-VGIKRKQAEAILDGKERI---- 240
Query: 296 WEQ-LKNTLQSGKQKVQGLRRCVEEIVFAFTYPR--LDMEVSKHRNHLLKAPFCVHPKTG 352
+E ++N L + + G + + + T+ R D +V+ +L+ P +H K G
Sbjct: 241 YEGFVRNALLTAFPQGIGYKTLMRLFSLSTTFSRAYFDGKVTIDLKRILRVPSSLHSKVG 300
Query: 353 RVCIPI--DPKDCEEFDP 368
V I D + E+F+P
Sbjct: 301 MVTTYIGDDERKLEKFNP 318
>gi|145551253|ref|XP_001461304.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429137|emb|CAK93931.1| unnamed protein product [Paramecium tetraurelia]
Length = 1893
Score = 40.8 bits (94), Expect = 1.3, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 268 ESVTSELRGKWQEN----RRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFA 323
+S+ +L QEN +R S++ + QLK LQ ++K + + C++++
Sbjct: 136 DSLAVQLEKIKQENDTLRKRVSDNINSQSLSNLAQLKMQLQKAEKKAESRKVCIKKLYQL 195
Query: 324 FTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDPTTVPTLSELLRELNT 383
++E+ K K F + + PK+ E F T P L L+++L+
Sbjct: 196 LDKSEKELELYKSGKKSAKTSFSKKNELNEILNGAYPKNKENFPETYEPLLLSLIKDLDQ 255
Query: 384 GDSRMDVDNEWEKTSLGKSIRFFRSSFLQPLLKSCKEEMES-----GYKAKIQQTKNSL 437
+ ++N + SL I +S+ +Q LKS K E Y A+I + L
Sbjct: 256 KNYEA-IENLSKNNSLNGDIENEKSTLIQNSLKSFKHMCEQKEEILKYSAQICENNQDL 313
>gi|18976482|ref|NP_577839.1| DNA primase small subunit [Pyrococcus furiosus DSM 3638]
gi|397652178|ref|YP_006492759.1| DNA primase small subunit [Pyrococcus furiosus COM1]
gi|13878644|sp|Q9P9H1.1|PRIS_PYRFU RecName: Full=DNA primase small subunit; AltName: Full=DNA primase
41 kDa subunit; Short=p41
gi|13096725|pdb|1G71|A Chain A, Crystal Structure Of Pyrococcus Furiosus Dna Primase
gi|13096726|pdb|1G71|B Chain B, Crystal Structure Of Pyrococcus Furiosus Dna Primase
gi|9453869|dbj|BAB03293.1| DNA primase [Pyrococcus furiosus DSM 3638]
gi|18892025|gb|AAL80234.1| DNA primase, putative [Pyrococcus furiosus DSM 3638]
gi|393189769|gb|AFN04467.1| DNA primase small subunit [Pyrococcus furiosus COM1]
Length = 347
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
EL+FDID D R VC C K LR++ GF++I VYSG RG
Sbjct: 91 ELVFDIDAKDLPLKRCNHEPGTVCPICLEDAKELAKDTLIILREELGFENIHVVYSG-RG 149
Query: 182 VHCWVCDGKARRLTNEQRGAIADY 205
H + D A +L ++ R I +
Sbjct: 150 YHIRILDEWALQLDSKSRERILAF 173
>gi|14590130|ref|NP_142194.1| DNA primase small subunit [Pyrococcus horikoshii OT3]
gi|8928293|sp|O57934.1|PRIS_PYRHO RecName: Full=DNA primase small subunit; AltName: Full=DNA primase
41 kDa subunit; Short=p41
gi|3256581|dbj|BAA29264.1| 346aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 346
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
EL+FDID D R VC C ++ LR++ GF+ I +YSG RG
Sbjct: 91 ELVFDIDAKDLPLRRCEHEPGTVCPICLNDAKEIVRDTVIILREELGFNDIHIIYSG-RG 149
Query: 182 VHCWVCDGKARRLTNEQRGAIADY 205
H V D A +L ++ R I +
Sbjct: 150 YHIRVLDEWALKLDSKSRERILSF 173
>gi|47169420|pdb|1V33|A Chain A, Crystal Structure Of Dna Primase From Pyrococcus
Horikoshii
gi|47169421|pdb|1V34|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Dna Primase-utp
Complex
Length = 366
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
EL+FDID D R VC C ++ LR++ GF+ I +YSG RG
Sbjct: 111 ELVFDIDAKDLPLRRCEHEPGTVCPICLNDAKEIVRDTVIILREELGFNDIHIIYSG-RG 169
Query: 182 VHCWVCDGKARRLTNEQRGAIADY 205
H V D A +L ++ R I +
Sbjct: 170 YHIRVLDEWALKLDSKSRERILSF 193
>gi|448568302|ref|ZP_21637879.1| DNA primase small subunit [Haloferax lucentense DSM 14919]
gi|445727252|gb|ELZ78866.1| DNA primase small subunit [Haloferax lucentense DSM 14919]
Length = 385
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 22/200 (11%)
Query: 175 VYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYT 234
V+SG RG H V D R L +E R I DY R + ++ + G ++R+
Sbjct: 143 VFSGGRGYHVHVRDESVRGLDSEARREIVDYIRAIDLDFDALIETRQHGTTTQRVLRTEG 202
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
R L L EE + LS + EL G +K + F
Sbjct: 203 GWGRRTHRRLLDFVDALLEMEE--DAALSRL------KELDGIGD-----GRAKTILGAF 249
Query: 295 RWEQLKNTLQSGKQKVQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVH 348
R + ++ G + G+R VE E V T P +D V+ L++ P +H
Sbjct: 250 R--NNPDAVREGNVEAGGPGVRTLVEALAHETVEDQTSP-IDEPVTTDTKRLIRLPKSLH 306
Query: 349 PKTGRVCIPIDPKDCEEFDP 368
+G V P+D + + FDP
Sbjct: 307 GGSGLVVEPLDRDEIDGFDP 326
>gi|341582356|ref|YP_004762848.1| DNA primase small subunit [Thermococcus sp. 4557]
gi|340810014|gb|AEK73171.1| DNA primase small subunit [Thermococcus sp. 4557]
Length = 346
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 122 ELIFDIDITDYDDVRYCCSGAD------VCLECWPLMTVAIKVIDTALRDDFGFDHILWV 175
EL+FDID D +R C + +CLE + VI L++DFGF+ + +
Sbjct: 93 ELVFDIDAKDLP-LRRCSHLHEHGRVCPICLEDAKELARDTLVI---LKEDFGFEDVHVI 148
Query: 176 YSGRRGVHCWVCDGKARRLTNEQRGAIADY 205
YSG RG H V D A +L + R + Y
Sbjct: 149 YSG-RGYHIRVLDDWALKLEGKAREKVLAY 177
>gi|408382988|ref|ZP_11180528.1| DNA primase small subunit [Methanobacterium formicicum DSM 3637]
gi|407814304|gb|EKF84932.1| DNA primase small subunit [Methanobacterium formicicum DSM 3637]
Length = 322
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 29/250 (11%)
Query: 119 VERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSG 178
++ E++FD+D D +R C +VC C ++ + L+ D G +I VYSG
Sbjct: 88 IKAEVVFDVDAKDIP-IR-SCGCDNVCEICLGQAKGIVQGLVDTLKGDLGLKNIYVVYSG 145
Query: 179 RRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLR 238
RG H V D + ++ R I Y G+E + S G +
Sbjct: 146 -RGYHIRVLDDMVMGMDSDVRSQIVKYL---VGSEVPRSEYSSHGMKYKL---------- 191
Query: 239 EFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQ 298
E F Q T++ + +LS+ D + R + +E +N +W
Sbjct: 192 EHFTIPFGYPQVF--TQQVKQALLSLSLDTEIDDVSR---DIKKAVIKHRELLNDDQWGL 246
Query: 299 LKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
+ ++ G Q+ L + + + +D +VS +L+ P +H I
Sbjct: 247 FRKSI--GPQRYARLVKGIASLNLTL----VDAKVSIDLKRILRLPSSLHSGVSMKSTLI 300
Query: 359 DPKDCEEFDP 368
K+ E FDP
Sbjct: 301 --KNLETFDP 308
>gi|261402266|ref|YP_003246490.1| DNA primase, small subunit [Methanocaldococcus vulcanius M7]
gi|261369259|gb|ACX72008.1| DNA primase, small subunit [Methanocaldococcus vulcanius M7]
Length = 348
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
REF + + R SF +E E ++ I + P + Y P+ GG +
Sbjct: 33 REFGYGYLKKVDNRNLSFKNEREYKSWILKNAPMHLYKSLAYMRYPSN-----VGGASNK 87
Query: 117 APVERELIFDIDITDYDDVRYCCSGAD--VCLECWP-LMTVAIKVIDTALRDDFGF--DH 171
REL FDID+ C+ D +C C AI +I+ L DFG D
Sbjct: 88 GIFRRELAFDIDVHKTGK----CNHEDDWICKYCLEEAKNQAIYLIEEFLIPDFGLNEDD 143
Query: 172 ILWVYSGRRGVHCWV 186
+ V+SG RG H ++
Sbjct: 144 LKIVFSGNRGYHIYI 158
>gi|374635828|ref|ZP_09707418.1| DNA primase, small subunit [Methanotorris formicicus Mc-S-70]
gi|373560964|gb|EHP87210.1| DNA primase, small subunit [Methanotorris formicicus Mc-S-70]
Length = 351
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVF 116
REF + + R SF E +N + + P + Y P+K GG N
Sbjct: 39 REFGYGYFKKVDNRNISFKDGEEYKNWVLKNAPFHLYKSLSYMEFPSK-----SGGANKK 93
Query: 117 APVERELIFDIDITDYDDVRYCCSGA-DVCLECWPLMTVAIKVIDTALRDDFGF--DHIL 173
RE+ FDID+ R+ + CLE A+ +I+ L DFG D +
Sbjct: 94 KVFRREIAFDIDVHKTKKCRHSDDWVCEYCLE--EAKNQALYLIEEFLMSDFGLSGDDLQ 151
Query: 174 WVYSGRRGVHCWV 186
+SG RG H ++
Sbjct: 152 IAFSGNRGYHIYI 164
>gi|449513651|ref|XP_002195008.2| PREDICTED: DNA primase small subunit-like, partial [Taeniopygia
guttata]
Length = 93
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 352 GRVCIPIDPKDCEEFDPTTVPTLSELLRELNTGDSRMDVDNEWEKTSLGKSIRFFRSSFL 411
GR+ +P+D + ++FDP VPT+S L +EL+ S + ++ E T + R +R + L
Sbjct: 25 GRISVPLDLQRLDQFDPFAVPTISSLCQELDAAGSDGEQEDGAE-TEPKRRTRDYRRTSL 83
Query: 412 QPLLK 416
P ++
Sbjct: 84 APYVR 88
>gi|448503599|ref|ZP_21613228.1| DNA primase small subunit [Halorubrum coriense DSM 10284]
gi|445691800|gb|ELZ43983.1| DNA primase small subunit [Halorubrum coriense DSM 10284]
Length = 387
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 132/344 (38%), Gaps = 66/344 (19%)
Query: 57 REFSFTLDNDIYLRFQSFN--SESELENSIKEKCPSKIDIGPVYSVDPAKRHAY---AQG 111
R S +L D YLR + ++ + S++ + D A RHAY A+
Sbjct: 18 RSVSLSLPPDAYLREWGHIPWTPGSGTTMVRHQALSELGDVDTFFADNAPRHAYFSAARY 77
Query: 112 GDNVFAPVER------ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALR- 164
D A + + +L+FD+D D+ G D +P M A K + LR
Sbjct: 78 DDPGAATMGQKGWRNADLVFDLD-ADH------LPGVDPETTSYPEMLAACK--EALLRL 128
Query: 165 -----DDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYK--------- 210
DDF FD + V+SG RG H V D R L ++ R I DY R
Sbjct: 129 LDFVDDDFAFDDVTVVFSGGRGYHVHVRDESVRGLDSDARREIVDYVRAIDLDTDGLIRT 188
Query: 211 -GNENSNKKV-----SFPGPLHPFLVRSYTEVLREFFEEKLLLSQNLFSTEERYEKILSM 264
+ + K+V + +H LV Y + LRE +E + ER ++ +
Sbjct: 189 VSDRGTTKRVLRTEGGWGARVHDALV-EYADDLREMDDE---------AARERLMELDGI 238
Query: 265 IPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAF 324
E + + G + N + + +++G V+ L + V A
Sbjct: 239 --GEGRANTILGAFDRNPTAVR-------------EGNVEAGGPGVRRLVSALASRVAAA 283
Query: 325 TYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
+D V+ L++ P +H + V P+D + +FDP
Sbjct: 284 DAAPIDEPVTTDTRRLIRLPGTLHGGSALVVTPLDRDELADFDP 327
>gi|410721766|ref|ZP_11361093.1| DNA primase small subunit [Methanobacterium sp. Maddingley MBC34]
gi|410598307|gb|EKQ52888.1| DNA primase small subunit [Methanobacterium sp. Maddingley MBC34]
Length = 324
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 20/164 (12%)
Query: 47 PACDKSYFGRREFSFTL----DNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYSVDP 102
P + +REF F ND R++ F + L ++ + P + P
Sbjct: 27 PEFIRETLTQREFGFDHIGRGPND---RYRVFQNTDYLRKFMRVRTPFAAYSSVAFYHKP 83
Query: 103 AKRHAYAQGGDNVFAPVERELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTA 162
+R + ++ EL+FD+D D +R C +VC C + +
Sbjct: 84 RRRDGW----------IKAELVFDVDAKDIP-IR-SCGCDNVCEICLKQAKDIVHGLIDT 131
Query: 163 LRDDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYF 206
++ D G +I VYSG RG H V D + ++ R I Y
Sbjct: 132 IKGDLGLSNIYVVYSG-RGYHIRVLDDIVMGMDSDVRSQIVKYL 174
>gi|448606062|ref|ZP_21658641.1| DNA primase small subunit [Haloferax sulfurifontis ATCC BAA-897]
gi|445739479|gb|ELZ90986.1| DNA primase small subunit [Haloferax sulfurifontis ATCC BAA-897]
Length = 385
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 31/295 (10%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R QS +L + + P + DP +G E +L+FDID
Sbjct: 47 RHQSLLDLGDLSDYLARSAPRHVYFSSARFADPGAGSMDDKGW------READLVFDIDA 100
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
V +G L+ A+ + L DDF F+ + V+SG RG H V D
Sbjct: 101 DHLPGVDPETTGYADMLDAG---KEALLDLLDLLEDDFAFEEMQAVFSGGRGYHVHVRDE 157
Query: 190 KARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQ 249
R L +E R + DY R + ++ + G ++R+ R E L
Sbjct: 158 SVRGLDSEARREVVDYIRAIDLDFDALIETRQHGTTTQRVLRTEGGWGRRTHERLLEFVD 217
Query: 250 NLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQK 309
L EE + LS + EL G +K + FR + ++ G +
Sbjct: 218 ALLEMEE--DAALSRL------KELDGIGD-----GRAKTILGAFRTN--PDAVREGNVE 262
Query: 310 VQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPI 358
G+R VE E V T P +D V+ L++ P +H +G V P+
Sbjct: 263 AGGPGVRTLVEALAHETVEDETSP-IDEPVTTDTKRLIRLPKSLHGGSGLVVEPL 316
>gi|300710835|ref|YP_003736649.1| DNA primase, small subunit [Halalkalicoccus jeotgali B3]
gi|448295165|ref|ZP_21485238.1| DNA primase small subunit [Halalkalicoccus jeotgali B3]
gi|299124518|gb|ADJ14857.1| DNA primase, small subunit [Halalkalicoccus jeotgali B3]
gi|445585135|gb|ELY39439.1| DNA primase small subunit [Halalkalicoccus jeotgali B3]
Length = 393
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 37/263 (14%)
Query: 122 ELIFDIDITDYDDVRYC-CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRR 180
+LIFD+D V S ++ +C + + +D DFGF+ + V+SG R
Sbjct: 93 DLIFDLDADHLPGVVPSEDSYGEMLADCKEALFKLLSFLDA----DFGFEELTVVFSGGR 148
Query: 181 GVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVL-RE 239
G H V D + L + R I DY R + F +VR L R
Sbjct: 149 GYHVHVRDPGVQDLERDSRREIVDYVR--------GIGLDF----EELIVRETVAGLGRR 196
Query: 240 FFEEKLLLSQNLFSTEERYEKILSMIP---------DESVTSELRGKWQENRRSSNSKED 290
EK L ++ +E +L ++ +E+ LR E K
Sbjct: 197 TPAEKRTLDTRGGWSKRAHEHVLDLVTELVELADTNEETAIDRLR----EFEGIGEGKAR 252
Query: 291 INFFRWEQLKNTLQSGKQKVQG-----LRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPF 345
+ + +++G V R+ E V P +D V+ N L++ P
Sbjct: 253 AALTAMTENRAEIEAGNVDVHPAFFSLARQIAAESVTRDNAP-IDEPVTTDTNRLIRLPG 311
Query: 346 CVHPKTGRVCIPIDPKDCEEFDP 368
+H +G +D ++ ++F P
Sbjct: 312 SLHGGSGLAVKRLDREELDDFAP 334
>gi|238610833|ref|XP_002397822.1| hypothetical protein MPER_01689 [Moniliophthora perniciosa FA553]
gi|215473083|gb|EEB98752.1| hypothetical protein MPER_01689 [Moniliophthora perniciosa FA553]
Length = 123
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 235 EVLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFF 294
E L + F + +L Q+ F +E YE +L +IPD V LR W + + S S+E N F
Sbjct: 4 EELADLFGDLILRDQDCFGSESSYEALLQLIPDSKVVQNLREIWSNDPQKS-SEEKWNDF 62
Query: 295 RWEQLKNTLQSGKQKVQGLRRCVEEIVF 322
+ Q+K + Q+ L +E+I+
Sbjct: 63 K-SQIKKYPKGSAQR-SVLTAAMEDIIL 88
>gi|433590964|ref|YP_007280460.1| DNA primase, eukaryotic-type, small subunit, putative [Natrinema
pellirubrum DSM 15624]
gi|448334497|ref|ZP_21523672.1| DNA primase small subunit [Natrinema pellirubrum DSM 15624]
gi|433305744|gb|AGB31556.1| DNA primase, eukaryotic-type, small subunit, putative [Natrinema
pellirubrum DSM 15624]
gi|445619829|gb|ELY73346.1| DNA primase small subunit [Natrinema pellirubrum DSM 15624]
Length = 391
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYAEMLAKCKDALLRLLDFLETDFAFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLGLDREHRREIVDYVR 176
>gi|15897915|ref|NP_342520.1| DNA primase small subunit [Sulfolobus solfataricus P2]
gi|284173563|ref|ZP_06387532.1| DNA primase small subunit [Sulfolobus solfataricus 98/2]
gi|384434470|ref|YP_005643828.1| DNA primase small subunit [Sulfolobus solfataricus 98/2]
gi|34395819|sp|Q97Z83.1|PRIS_SULSO RecName: Full=Probable DNA primase small subunit
gi|83753852|pdb|1ZT2|A Chain A, Heterodimeric Structure Of The Core Primase.
gi|83753853|pdb|1ZT2|C Chain C, Heterodimeric Structure Of The Core Primase.
gi|13814232|gb|AAK41310.1| DNA primase, putative [Sulfolobus solfataricus P2]
gi|261602624|gb|ACX92227.1| DNA primase small subunit [Sulfolobus solfataricus 98/2]
Length = 330
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 32/174 (18%)
Query: 57 REFSFT-LDNDIYLRFQSFNSESELENS-IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
REF+ +D Y+R SF+S EL + + P + P+ R+ +
Sbjct: 36 REFALQPFGSDTYVRHLSFSSSEELRDYLVNRNLPLHLFYSSARYQLPSARNMEEK---- 91
Query: 115 VFAPVERELIFDID---ITDYDDVRYC--CSGADVCLECWPLMTVAIKVIDTA------- 162
A + +L+FDID + +R+C C A V +C ++ ++
Sbjct: 92 --AWMGSDLLFDIDADHLCKLRSIRFCPVCGNAVVSEKCERDNVETLEYVEMTSECIKRG 149
Query: 163 ----------LRDDFGFDHILWVYSGRRGVHCWV-CDGKARRLTNEQRGAIADY 205
L DDFG ++ +SG RG H V C G L +++R IA+Y
Sbjct: 150 LEQTRNLVEILEDDFGLKPKVY-FSGNRGFHVQVDCYGNCALLDSDERKEIAEY 202
>gi|227827453|ref|YP_002829232.1| DNA primase small subunit [Sulfolobus islandicus M.14.25]
gi|229584668|ref|YP_002843169.1| DNA primase small subunit [Sulfolobus islandicus M.16.27]
gi|259534458|sp|C3N549.1|PRIS_SULIA RecName: Full=Probable DNA primase small subunit
gi|259534471|sp|C3MYF5.1|PRIS_SULIM RecName: Full=Probable DNA primase small subunit
gi|227459248|gb|ACP37934.1| DNA primase small subunit [Sulfolobus islandicus M.14.25]
gi|228019717|gb|ACP55124.1| DNA primase small subunit [Sulfolobus islandicus M.16.27]
Length = 330
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 57 REFSFT-LDNDIYLRFQSFNSESELENS-IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
REF+ +D Y+R SF+S EL + + P + PA R +
Sbjct: 36 REFALQPFGSDTYIRHLSFSSSEELRDYLVNRNLPLHLFYSSARYQLPAARDMEEK---- 91
Query: 115 VFAPVERELIFDID---ITDYDDVRYC--CSGA-----------------DVCLECWPLM 152
A + +L+FDID I +R+C C A ++ EC
Sbjct: 92 --AWMGSDLLFDIDADHICKLRSIRFCPVCGNAITSEKCERDNVETLEYVEMTSECIKRG 149
Query: 153 TVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV-CDGKARRLTNEQRGAIADY 205
+ + L DDFG ++ +SG RG H V C G L +++R IA+Y
Sbjct: 150 LEEARNLVEILEDDFGLKPKVY-FSGNRGFHVQVDCYGDCALLDSDERKEIAEY 202
>gi|448385438|ref|ZP_21563944.1| DNA primase small subunit [Haloterrigena thermotolerans DSM 11522]
gi|445656933|gb|ELZ09765.1| DNA primase small subunit [Haloterrigena thermotolerans DSM 11522]
Length = 391
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 122 ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRG 181
+L+FD+D D + G D E A+ + L DF F+ + V+SG RG
Sbjct: 94 DLVFDLDA---DHLPSVTLGEDSYAEMLSKCKDALLRLLDFLETDFAFEDLEIVFSGGRG 150
Query: 182 VHCWVCDGKARRLTNEQRGAIADYFR 207
H V D L E R I DY R
Sbjct: 151 YHVHVRDENVLGLDREHRREIVDYVR 176
>gi|389848136|ref|YP_006350375.1| DNA primase small subunit [Haloferax mediterranei ATCC 33500]
gi|448618233|ref|ZP_21666578.1| DNA primase small subunit [Haloferax mediterranei ATCC 33500]
gi|388245442|gb|AFK20388.1| DNA primase small subunit [Haloferax mediterranei ATCC 33500]
gi|445747788|gb|ELZ99243.1| DNA primase small subunit [Haloferax mediterranei ATCC 33500]
Length = 385
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 113/305 (37%), Gaps = 31/305 (10%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R QS EL + + P + DP +G E +L+FDID
Sbjct: 47 RHQSLLDLGELSDYLARSAPRHVYFSSARFADPGAATMDDKGW------READLVFDIDA 100
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWVCDG 189
V +G LE A+ + L DDF FD + V+SG RG H V D
Sbjct: 101 DHLPGVDPETTGYADMLEAG---KQALLDLLDLLEDDFDFDEMQAVFSGGRGYHVHVRDE 157
Query: 190 KARRLTNEQRGAIADYFRVYKGNENSNKKVSFPGPLHPFLVRSYTEVLREFFEEKLLLSQ 249
R L +E R + DY R + ++ + G ++R+ R L
Sbjct: 158 SIRGLDSEARREVVDYIRAIDLDFDALIETRQHGTTTQRVLRAEGGWGRRTHRRLLDFVD 217
Query: 250 NLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQK 309
L EE E L + EL G +K + FR + ++ G +
Sbjct: 218 GLMDMEE--EAALERL------KELDGIGD-----GRAKTILGAFR--NNPDAIREGNVE 262
Query: 310 VQ--GLRRCVE----EIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVCIPIDPKDC 363
G+R VE E V T P +D V+ L++ P +H +G V P+ +
Sbjct: 263 AGGPGVRTLVESLARETVEDETSP-IDEPVTTDTKRLIRLPKSLHGGSGLVVEPLARDEI 321
Query: 364 EEFDP 368
E FDP
Sbjct: 322 EAFDP 326
>gi|402576065|gb|EJW70025.1| hypothetical protein WUBG_19068 [Wuchereria bancrofti]
Length = 71
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPVYS 99
RE +F ++D + R++SF ++ E + + P KIDIG VY+
Sbjct: 2 RELAFVFEDDRHARYRSFEDSADFERELCKANPQKIDIGAVYN 44
>gi|435850616|ref|YP_007312202.1| DNA primase, eukaryotic-type, small subunit, putative
[Methanomethylovorans hollandica DSM 15978]
gi|433661246|gb|AGB48672.1| DNA primase, eukaryotic-type, small subunit, putative
[Methanomethylovorans hollandica DSM 15978]
Length = 388
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 163 LRDDFGFDH--ILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADY 205
L DDFGF+ + V+SG RG HC + D L + +R I DY
Sbjct: 129 LLDDFGFEEKDVHIVFSGGRGYHCHITDPSVLHLESPERREIVDY 173
>gi|229578960|ref|YP_002837358.1| DNA primase small subunit [Sulfolobus islandicus Y.G.57.14]
gi|259534478|sp|C3NDP7.1|PRIS_SULIY RecName: Full=Probable DNA primase small subunit
gi|228009674|gb|ACP45436.1| DNA primase small subunit [Sulfolobus islandicus Y.G.57.14]
Length = 330
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 57 REFSFT-LDNDIYLRFQSFNSESELENS-IKEKCPSKIDIGPVYSVDPAKRHAYAQGGDN 114
REF+ +D+Y+R SF+S EL + + P + P+ R +
Sbjct: 36 REFALQPFGSDMYIRHLSFSSSEELRDYLVNRNLPLHLFYSSARYQLPSARDMEEK---- 91
Query: 115 VFAPVERELIFDID---ITDYDDVRYC--CSGA-----------------DVCLECWPLM 152
A + +L+FDID I +R+C C A ++ EC
Sbjct: 92 --AWMGSDLLFDIDADHICKLRSIRFCPVCGNAITSEKCERDNVETLEYVEMTSECIKRG 149
Query: 153 TVAIKVIDTALRDDFGFDHILWVYSGRRGVHCWV-CDGKARRLTNEQRGAIADY 205
+ + L DDFG ++ +SG RG H V C G L +++R IA+Y
Sbjct: 150 LEEARNLVEILEDDFGLKPKVY-FSGNRGFHVQVDCYGDCALLDSDERKEIAEY 202
>gi|167043412|gb|ABZ08114.1| putative DNA primase small subunit [uncultured marine microorganism
HF4000_APKG1C9]
Length = 403
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 20/158 (12%)
Query: 70 RFQSFNSESELENSIKEKCPSKIDIGPVYSVDPAKRHAYAQGGDNVFAPVERELIFDIDI 129
R + F+ + EL + + +K P Y DP++R+ +G + +LIFD+D
Sbjct: 47 RHRGFSDKRELLHYLHQKAPHSCFHSTAYYNDPSERNMDDKGW------LGADLIFDLD- 99
Query: 130 TDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALRDDFGF--DHILWVYSGRRGVHCWV- 186
D S +D + A ++ L +FGF +H + +SG RG H V
Sbjct: 100 ---GDHLPGVSDSDFPQMIDLVQEQAWRLWSEFLEPEFGFSENHAQFTFSGHRGFHIHVR 156
Query: 187 ------CDGKARR-LTNEQRGAIADYFRVYKGNENSNK 217
D ARR L N RG + V G E+ K
Sbjct: 157 EPTYLQLDSNARRQLVNYIRGQGVNVQAVMSGTESGWK 194
>gi|448535605|ref|ZP_21622125.1| DNA primase small subunit [Halorubrum hochstenium ATCC 700873]
gi|445703106|gb|ELZ55041.1| DNA primase small subunit [Halorubrum hochstenium ATCC 700873]
Length = 387
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 129/333 (38%), Gaps = 44/333 (13%)
Query: 57 REFSFTLDNDIYLRFQSFNSESELENSIKEKCPSKIDIGPV--YSVDPAKRHAY---AQG 111
R S +L D LR + + + S D+G V + D A RHAY A+
Sbjct: 18 RSVSLSLPPDANLREWGHIPWTPGSGTTMVRHQSLFDLGDVDTFFADNAPRHAYFSAARY 77
Query: 112 GDNVFAPVER------ELIFDIDITDYDDVRYCCSGADVCLECWPLMTVAIKVIDTALR- 164
D A + + +L+FD+D D+ G D +P M K D LR
Sbjct: 78 DDPGAATMGQKGWRNADLVFDLD-ADH------LPGVDPETTSYPEMLAECK--DALLRL 128
Query: 165 -----DDFGFDHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSNKKV 219
DDF FD + V+SG RG H V D R L ++ R + DY R + +
Sbjct: 129 LDFIDDDFAFDDVTVVFSGGRGYHVHVRDESVRELDSDARREVVDYVRAIDLDTD----- 183
Query: 220 SFPGPLHPFLVRSYTE-VLREFFEEKLLLSQNLFSTEERYEKILSMIPDESVTSELR--- 275
G +H R T+ VLR + + L Y L DE+ +L
Sbjct: 184 ---GLIHTVSERGTTKRVLRTEGGWGARVHEALIE----YADDLREKDDEAAREQLTKFD 236
Query: 276 GKWQENRRSSNSKEDINFFRWEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSK 335
G ++ + D N + +++G V+ L + V A +D V+
Sbjct: 237 GIGEKGAETILGAFDRNPTAVRE--GNVEAGGPGVRRLVSALAARVAAEDAAPIDEPVTT 294
Query: 336 HRNHLLKAPFCVHPKTGRVCIPIDPKDCEEFDP 368
L++ P +H +G V P+D + +F+P
Sbjct: 295 DTRRLIRLPGTLHGGSGLVVTPLDRDELADFEP 327
>gi|448440750|ref|ZP_21588828.1| DNA primase small subunit [Halorubrum saccharovorum DSM 1137]
gi|445690136|gb|ELZ42357.1| DNA primase small subunit [Halorubrum saccharovorum DSM 1137]
Length = 387
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 113/313 (36%), Gaps = 70/313 (22%)
Query: 90 SKIDIGPV--YSVDPAKRHAYAQGG--DNVFAPV-------ERELIFDIDITDYDDVRYC 138
S D+G V + D A RHAY D+ A +L+FD+D D+
Sbjct: 51 SLYDLGDVDTFFADNAPRHAYFSAARYDDPGASTMSQKGWRSADLVFDLD-ADH------ 103
Query: 139 CSGADVCLECWPLMTVAIKVIDTALRDDFGFDHILW----VYSGRRGVHCWVCDGKARRL 194
G D +P M K L D D V+SG RG H V D R L
Sbjct: 104 LPGVDPETTSYPAMLAECKRALLRLLDFLDDDFAFDDLTVVFSGGRGYHVHVRDESVREL 163
Query: 195 TNEQRGAIADYFRVYK----------GNENSNKKV-----SFPGPLHPFLVRSYTEVLRE 239
++ R I DY R + K+V + +H L+ Y + LR+
Sbjct: 164 NSDARREIVDYVRAIDLDTEGLIRTVSERGTTKRVLRTEGGWGARVHEALI-EYADDLRD 222
Query: 240 FFE----EKLLLSQNLFSTEERYEKILSMIPDESVTSELRGKWQENRRSSNSKEDINFFR 295
E E+L+ + + E R E IL G ++ N +
Sbjct: 223 MDEDAARERLMELEGI--GEGRAETIL-------------GAFERNPTAVR--------- 258
Query: 296 WEQLKNTLQSGKQKVQGLRRCVEEIVFAFTYPRLDMEVSKHRNHLLKAPFCVHPKTGRVC 355
+ +++G V+ L + V A +D V+ L++ P +H +G V
Sbjct: 259 ----EGNVEAGGPGVRRLVSALAARVAATDTAPIDEPVTTDTRRLIRLPGTLHGGSGLVV 314
Query: 356 IPIDPKDCEEFDP 368
PI+ + FDP
Sbjct: 315 TPIERGGLDGFDP 327
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,329,839,534
Number of Sequences: 23463169
Number of extensions: 322192333
Number of successful extensions: 667007
Number of sequences better than 100.0: 608
Number of HSP's better than 100.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 664791
Number of HSP's gapped (non-prelim): 758
length of query: 439
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 293
effective length of database: 8,933,572,693
effective search space: 2617536799049
effective search space used: 2617536799049
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)