BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013623
(439 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp.
japonica GN=Os03g0108600 PE=2 SV=2
Length = 641
Score = 278 bits (712), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 165/363 (45%), Positives = 223/363 (61%), Gaps = 39/363 (10%)
Query: 74 TPLETAGACELIDNDTGEKVIVWGGTDDDHDHDPPIPPKHLLDSSNWNKDPSQPTTSAPV 133
P++T GA L+D TG VIVWGGTDD P + S + P +P +
Sbjct: 57 VPMDTPGAYRLVDRATGRSVIVWGGTDDVSMPSPAV-------LSTTTRVPDRPKENG-- 107
Query: 134 LRNNDCSIPSKKGVISSFSRLKAQRVKAVVDKRSAMGKKTVNALKQEGRLSKTTPSLE-- 191
+ I +F RLKAQ+VK V+ +RSA K+ + R S++ PS E
Sbjct: 108 ----------RSTSIGNFGRLKAQKVK-VLARRSAHLKREDSGRISTSRFSES-PSDESD 155
Query: 192 ------------NFRELGEHIVDNDVPAESIDKNISDYNSRSNKHEKSGTKIDRGWRSGG 239
N R+ D A S++ + Y ++ + G++ G + G
Sbjct: 156 EDGTYFERDRARNTRQNSRSRDDKTRGAHSLNSVLRQYRG-ADDLDFPGSEATSGSKRWG 214
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAF 299
+I ++ + + QR K D FFSR+SFKE+GCSD ++ +L+ F RPS IQAMA+
Sbjct: 215 NISDVTFGRQN---QRQKGPLDSGFFSRRSFKEIGCSDEILGALRSFGFPRPSHIQAMAY 271
Query: 300 PPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELAS 359
PV+EGKSCI+ DQSGSGKTLAYL PV+Q LR+EE++GL +S+ +PRVV+L PTAELAS
Sbjct: 272 RPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELAS 331
Query: 360 QVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLI 419
QVL+NCRS+SK GVPFRSMV TGGFRQKTQLE+L + +DVLIATPGRF++L++EG +QL
Sbjct: 332 QVLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLN 391
Query: 420 NLR 422
NLR
Sbjct: 392 NLR 394
>sp|Q8GUG7|RH50_ARATH DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana
GN=RH50 PE=2 SV=2
Length = 781
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 161/205 (78%), Gaps = 4/205 (1%)
Query: 220 RSNKHEKSGTKIDRGWRSGGSIHNLQYEPTDCPKQRHKY--SADGDFFSRKSFKELGCSD 277
R H K RGW S+ + D ++R+K + + FFSRK+F E+GCS+
Sbjct: 326 RGGSHSKGSDTNSRGWGDRRSV--VYTRDMDDWRERNKTKDTRETGFFSRKTFAEIGCSE 383
Query: 278 YMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQG 337
M+++LK QNF RP+ IQAMAF PV++GKSCI+ADQSGSGKTLAYL+PVIQRLR+EELQG
Sbjct: 384 DMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQG 443
Query: 338 LSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGV 397
SKS+ G PRV++L PTAELASQVL+NCRS+SK GVPFRSMVVTGGFRQ+TQLENL++GV
Sbjct: 444 HSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGV 503
Query: 398 DVLIATPGRFMFLIKEGILQLINLR 422
DVLIATPGRF +L+ EGIL L NLR
Sbjct: 504 DVLIATPGRFTYLMNEGILGLSNLR 528
>sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana
GN=RH39 PE=2 SV=2
Length = 621
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
++F+ELG S+ ++ +L+ N P++IQ + P V+E KS +L +GSGKTLAYLLP++
Sbjct: 112 ENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIV 171
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
Q +R++E K+ PR V+L PT EL+ QV +S+S FRS++V+GG R +
Sbjct: 172 QLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHA-RFRSILVSGGSRIR 230
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEG 414
Q ++L +D+++ TPGR + I+EG
Sbjct: 231 PQEDSLNNAIDMVVGTPGRILQHIEEG 257
>sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp.
japonica GN=Os01g0184500 PE=2 SV=1
Length = 625
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF+ELG + ++ +L +P++IQ + P V+ G S +L +GSGKTLAYLLP++Q
Sbjct: 111 SFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQ 170
Query: 329 RLRQEE-LQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
LR++E + G+S PR V+L PT EL QV +S+S FRS +V+GG R +
Sbjct: 171 LLRRDEAMLGMSMKPR-RPRAVVLCPTRELTEQVFRVAKSISHHA-RFRSTMVSGGSRIR 228
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
Q ++L VD+++ TPGR + IK+G + ++++
Sbjct: 229 PQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKY 264
>sp|P25888|RHLE_ECOLI ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12)
GN=rhlE PE=1 SV=3
Length = 454
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF LG S ++ ++ Q + P+ IQ A P V+EG+ + + Q+G+GKT + LP++Q
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 329 RL--RQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQ 386
L RQ +G R +IL PT ELA+Q+ N R SK + RS+VV GG
Sbjct: 62 HLITRQPHAKGRRPV-----RALILTPTRELAAQIGENVRDYSKY-LNIRSLVVFGGVSI 115
Query: 387 KTQLENLQEGVDVLIATPGRFMFLIKEGILQL 418
Q+ L+ GVDVL+ATPGR + L + ++L
Sbjct: 116 NPQMMKLRGGVDVLVATPGRLLDLEHQNAVKL 147
>sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP2 PE=3 SV=1
Length = 554
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
+SF E G Y+++ +K++ F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 113 RSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGI 172
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVP--FRSMVVTGGFR 385
+ + L S P V++LAPT ELA Q+ C SK G R+ V GG
Sbjct: 173 VHINAQPLL----SPGDGPIVLVLAPTRELAVQIQKEC---SKFGASSRIRNTCVYGGVP 225
Query: 386 QKTQLENLQEGVDVLIATPGRFMFLIKEGILQL 418
+ Q+ +LQ GV++LIATPGR + +++ G L
Sbjct: 226 KSQQIRDLQRGVEILIATPGRLIDMLEIGKTNL 258
>sp|A6ZLH6|PRP5_YEAS7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Saccharomyces cerevisiae (strain YJM789) GN=PRP5 PE=3
SV=1
Length = 849
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 101/173 (58%), Gaps = 16/173 (9%)
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCS-DYMIESLKRQNFLRPSQIQAMA 298
S+ N++ + T CPK K+S +LG S D M+ ++ +F + IQ+ A
Sbjct: 239 SLDNIKIKGTGCPKPVTKWS------------QLGLSTDTMVLITEKLHFGSLTPIQSQA 286
Query: 299 FPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELA 358
P ++ G+ I ++GSGKT++YLLP++++++ + + LSK +G P +ILAPT ELA
Sbjct: 287 LPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQ--RPLSKHETG-PMGLILAPTRELA 343
Query: 359 SQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLI 411
Q+ ++ RS+ TGG K Q+ +L+ G ++++ATPGRF+ ++
Sbjct: 344 LQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDIL 396
>sp|P21372|PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP5 PE=1 SV=1
Length = 849
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 101/173 (58%), Gaps = 16/173 (9%)
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCS-DYMIESLKRQNFLRPSQIQAMA 298
S+ N++ + T CPK K+S +LG S D M+ ++ +F + IQ+ A
Sbjct: 239 SLDNIKIKGTGCPKPVTKWS------------QLGLSTDTMVLITEKLHFGSLTPIQSQA 286
Query: 299 FPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELA 358
P ++ G+ I ++GSGKT++YLLP++++++ + + LSK +G P +ILAPT ELA
Sbjct: 287 LPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQ--RPLSKHETG-PMGLILAPTRELA 343
Query: 359 SQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLI 411
Q+ ++ RS+ TGG K Q+ +L+ G ++++ATPGRF+ ++
Sbjct: 344 LQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDIL 396
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 86/145 (59%), Gaps = 5/145 (3%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
KSF+++G DY++E +K+ F P+ IQ+ +P ++G+ I ++GSGKTL+YLLP I
Sbjct: 99 KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
+ + + + P V++LAPT ELA Q+ ++ + GG +
Sbjct: 159 VHVNAQPML----AHGDGPIVLVLAPTRELAVQIQQEASKFGSSS-KIKTTCIYGGVPKG 213
Query: 388 TQLENLQEGVDVLIATPGRFMFLIK 412
Q+ +LQ+GV+++IATPGR + +++
Sbjct: 214 PQVRDLQKGVEIVIATPGRLIDMME 238
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 5/147 (3%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
++F E G +Y+++ +K + F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 114 RTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGI 173
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
+ + L S P V++LAPT ELA Q+ C + R+ V GG +
Sbjct: 174 VHINAQPLL----SPGDGPVVLVLAPTRELAVQIQKECSKFGRSS-RIRNTCVYGGVPKS 228
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEG 414
Q+ +LQ GV++LIATPGR + +++ G
Sbjct: 229 QQIRDLQRGVEILIATPGRLIDMLEIG 255
>sp|A6RGE3|DBP2_AJECN ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP2 PE=3 SV=1
Length = 542
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 249 TDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGK 306
D ++ H+ + G R ++F E G Y++ +K Q F RP+ IQA +P + G+
Sbjct: 104 VDAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGR 163
Query: 307 SCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCR 366
+ ++GSGKTL Y LP I + + L + P V++LAPT ELA Q+ +
Sbjct: 164 DVVGIAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLVLAPTRELAVQIQTEIT 219
Query: 367 SLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEG 414
K R+ V GG + Q+ +L GV+V IATPGR + +++ G
Sbjct: 220 KFGKSS-RIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDMLEAG 266
>sp|Q6BL34|DBP10_DEBHA ATP-dependent RNA helicase DBP10 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP10 PE=3 SV=2
Length = 932
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF G S +++ ++ ++ F +P+ IQ P ++E + + ++GSGKT A+ LP+++
Sbjct: 98 SFPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVE 157
Query: 329 RLRQEELQGLSKSTSGSPRV----VILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGF 384
+L+ S SPRV +IL+P+ ELASQ + SK G RS+V+ GG
Sbjct: 158 KLK-----------SHSPRVGVRAIILSPSRELASQTFKQVKEFSK-GTDLRSIVLIGGD 205
Query: 385 RQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
+ Q ++ DV++ATPGRF+ L E L+L + +
Sbjct: 206 SLEEQFSSMMTNPDVIVATPGRFLHLKVEMELELKTVEY 244
>sp|A1C6C4|DBP2_ASPCL ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp2 PE=3 SV=1
Length = 549
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 249 TDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGK 306
D +Q HK + G R ++F E G Y++ +K Q F RP+ IQ+ +P + G+
Sbjct: 104 VDEFRQEHKMTVQGKNVPRPVETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGR 163
Query: 307 SCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCR 366
+ ++GSGKTL Y LP I + + L + P V++LAPT ELA Q+ +
Sbjct: 164 DVVGIAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLVLAPTRELAVQIQTEIT 219
Query: 367 SLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEG 414
K R+ V GG + Q+ +L GV+V IATPGR + +++ G
Sbjct: 220 KFGKSS-RIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAG 266
>sp|Q9NXZ2|DDX43_HUMAN Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens GN=DDX43
PE=2 SV=2
Length = 648
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Query: 275 CSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLP-VIQRLRQE 333
C ++E++K+ F +P+ IQ+ A+P V++G I Q+G+GKTL YL+P I + Q
Sbjct: 249 CYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQP 308
Query: 334 ELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENL 393
L+G P +++L PT ELA QV C S G+ RS+ V GG + Q+E L
Sbjct: 309 SLKG----QRNRPGMLVLTPTRELALQVEGECCKYSYKGL--RSVCVYGGGNRDEQIEEL 362
Query: 394 QEGVDVLIATPGRFMFLIKEGILQLINLRW 423
++GVD++IATPGR L + L N+ +
Sbjct: 363 KKGVDIIIATPGRLNDLQMSNFVNLKNITY 392
>sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP2 PE=3 SV=1
Length = 536
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 17/177 (9%)
Query: 242 HNLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPP 301
H+++ + TD PK SF E G DY+++ +K+Q F +P+ IQ +P
Sbjct: 91 HDMKCDGTDIPK------------PITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPM 138
Query: 302 VVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQV 361
+ G+ + +GSGKTL+Y LP I + + L S P V++LAPT ELA Q+
Sbjct: 139 ALSGRDMVGIASTGSGKTLSYCLPSIVHINAQPLL----SPGDGPIVLVLAPTRELAVQI 194
Query: 362 LSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQL 418
C R+ V GG + Q+ +L GV++ IATPGR + +++ G L
Sbjct: 195 QQECSKFGSSS-RIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNL 250
>sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP10 PE=3 SV=2
Length = 914
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 8/155 (5%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF G S ++++++ ++ F +P+ IQ P V+E + + ++GSGKT A++LPV++
Sbjct: 100 SFASFGLSKFLLKNIAKKGFKQPTPIQRKTIPLVMESRDVVGMARTGSGKTAAFVLPVVE 159
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+L+ S S R VIL+P+ ELA Q + +K G RS+V+ GG +
Sbjct: 160 KLK-------SHSPKVGVRAVILSPSRELALQTFKQVKEFTK-GTDLRSIVLIGGDSLED 211
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
Q ++ D+L+ATPGRF+ L E L L + +
Sbjct: 212 QFSSMMTNPDILVATPGRFLHLKVEMNLDLKTVEY 246
>sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp.
japonica GN=Os07g0301200 PE=2 SV=1
Length = 512
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 7/168 (4%)
Query: 257 KYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGS 316
K SAD + SF +++ K F RPS IQA A+P +++G+ I +GS
Sbjct: 83 KGSADAKYAPLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGS 140
Query: 317 GKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSN-CRSLSKCGVPF 375
GKT+A+ +P + +R++ G + G PRV++L+PT ELA Q+ C + + CG+
Sbjct: 141 GKTIAFGVPALMHVRRK--MGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGI-- 196
Query: 376 RSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
S+ + GG + Q+ L+ GVD++I TPGR LI+ GI +L ++ +
Sbjct: 197 SSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSF 244
>sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP2 PE=3 SV=3
Length = 554
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 9/152 (5%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF E G DY++ +K+Q F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 126 SFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIV 185
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVP--FRSMVVTGGFRQ 386
+ + L G P V++LAPT ELA Q+ C SK G R+ + GG +
Sbjct: 186 HINAQPLLG----PGDGPIVLVLAPTRELAVQIQQEC---SKFGASSRIRNTCIYGGAPK 238
Query: 387 KTQLENLQEGVDVLIATPGRFMFLIKEGILQL 418
Q+ +L GV++ IATPGR + +++ G L
Sbjct: 239 GQQIRDLARGVEICIATPGRLIDMLETGKTNL 270
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 97/175 (55%), Gaps = 7/175 (4%)
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAM 297
S+ + E + ++R + + +G + + F+++G +Y+++ + + F+ P+ IQ+
Sbjct: 61 SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 298 AFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAEL 357
+P + G+ I ++GSGKTLAYLLP I + + + + P V++LAPT EL
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL----APGDGPIVLVLAPTREL 176
Query: 358 ASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIK 412
A Q+ +S + GG + Q+ +LQ+GV+++IATPGR + +I+
Sbjct: 177 AVQIQQEATKFGASS-KIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIE 230
>sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP2 PE=3 SV=1
Length = 552
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F E G Y+++ +K+Q F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 117 NFDEAGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSYCLPAIV 176
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+ + + S P V++LAPT ELA Q+ C K R+ V GG +
Sbjct: 177 HINAQPML----SHGDGPIVLVLAPTRELAVQIQQECSKFGKSS-KIRNTCVYGGVPRGQ 231
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEG 414
Q+ +L GV+++IATPGR + +++ G
Sbjct: 232 QIRDLARGVEIVIATPGRLLDMLESG 257
>sp|Q754U8|PRP5_ASHGO Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=PRP5 PE=3 SV=2
Length = 855
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQ-NFLRPSQIQAMA 298
S+ N+Q DCP+ K+S +LG + ++ L R+ F P+ IQA A
Sbjct: 259 SLDNVQVRGRDCPRPILKWS------------QLGLNSGIMNLLTRELEFTVPTPIQAQA 306
Query: 299 FPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELA 358
P ++ G+ I ++GSGKT++++LP++++++ + G ++ P +IL+PT ELA
Sbjct: 307 IPAIMSGRDVIGISKTGSGKTVSFILPLLRQIKAQRPLGGDET---GPLGLILSPTRELA 363
Query: 359 SQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQL 418
Q+ + RS+ TGG K Q+ +++ GV+++IATPGRF+ L+ L
Sbjct: 364 LQIHEEVTKFTSGDPSIRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNL 423
Query: 419 IN 420
IN
Sbjct: 424 IN 425
>sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS)
GN=DBP2 PE=3 SV=2
Length = 545
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 7/181 (3%)
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAM 297
++ N + + ++ H+ + G R ++F E G Y+I +K Q F +P+ IQ+
Sbjct: 98 NVTNRSAQDVEAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQGFAKPTPIQSQ 157
Query: 298 AFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAEL 357
+P + G+ + ++GSGKTL Y LP I + + L G P V++LAPT EL
Sbjct: 158 GWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLG----PGDGPIVLVLAPTREL 213
Query: 358 ASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQ 417
A Q+ + K R+ V GG + Q+ +L GV+V IATPGR + +++ G
Sbjct: 214 AVQIQAEITKFGKSS-RIRNTCVYGGVPRGPQIRDLSRGVEVCIATPGRLIDMLEAGKTN 272
Query: 418 L 418
L
Sbjct: 273 L 273
>sp|P57453|DEAD_BUCAI Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=deaD PE=3 SV=1
Length = 601
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 9/153 (5%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F LG + ++I+SL +++PS IQA P ++EG+ + Q+GSGKT A+ LP++
Sbjct: 7 TFSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLLH 66
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
L +P++++LAPT ELA QV SK + + + GG R +
Sbjct: 67 NL---------NINLKAPQILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYEL 117
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINL 421
QL L++G +++ TPGR + +K G L L NL
Sbjct: 118 QLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNL 150
>sp|Q8K9H6|DEAD_BUCAP Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=deaD PE=3 SV=1
Length = 601
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F LG + ++I+SL + +++PS IQA P ++EG+ + Q+GSGKT A+ LP++
Sbjct: 7 TFSFLGLNPFIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLH 66
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
L +P++++LAPT ELA QV SK + + + GG R +
Sbjct: 67 NL---------NINLKAPQILVLAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGGQRYEV 117
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINL 421
QL L++G +++ TPGR + +K G L L NL
Sbjct: 118 QLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNL 150
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F E G DY+++ +K Q F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 128 TFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIV 187
Query: 329 RLR-QEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
+ Q +LQ P V++LAPT ELA Q+ + C K R+ V GG +
Sbjct: 188 HINAQPQLQ-----YGDGPIVLVLAPTRELAVQIQTECSKFGKSS-RIRNTCVYGGAPKG 241
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEG 414
Q+ +L GV++ IATPGR + +++ G
Sbjct: 242 PQIRDLARGVEICIATPGRLIDMLEAG 268
>sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana
GN=RH24 PE=1 SV=2
Length = 760
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAM 297
SI + + T +QR G R K+F++ G S ++ ++K+Q + +P+ IQ
Sbjct: 198 SISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQ 257
Query: 298 AFPPVVEGKSCILADQSGSGKTLAYLLP-VIQRLRQEELQGLSKSTSGSPRVVILAPTAE 356
A P V+ G+ I ++GSGKT A++LP ++ + Q ELQ P VI APT E
Sbjct: 258 ALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQ-----RDEGPIGVICAPTRE 312
Query: 357 LASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGIL 416
LA Q+ + SK R V GG + Q + L+ G ++++ATPGR + ++K L
Sbjct: 313 LAHQIFLEAKKFSKA-YGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKAL 371
Query: 417 QLINLRW 423
++ +
Sbjct: 372 TMMRASY 378
>sp|A5DS77|DBP2_LODEL ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP2 PE=3 SV=1
Length = 552
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF E G DY++ LK Q F +P+ IQ +P + G+ + +GSGKTL+Y LP I
Sbjct: 117 SFDEAGFPDYVLNELKNQGFPKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIV 176
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVP--FRSMVVTGGFRQ 386
+ Q L K G P V++LAPT ELA Q+ + C SK G R+ V GG +
Sbjct: 177 HINA---QPLLKRGDG-PIVLVLAPTRELACQIQTEC---SKFGASSRIRNTCVYGGAPK 229
Query: 387 KTQLENLQEGVDVLIATPGRFMFLIKEG 414
Q+ +L GV++ IATPGR + +++ G
Sbjct: 230 GPQIRDLANGVEICIATPGRLIDMLEAG 257
>sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2
PE=3 SV=1
Length = 545
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 253 KQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCIL 310
+++H+ + G R ++F E G Y++ +K Q F RP+ IQ+ +P + G+ +
Sbjct: 102 RKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVG 161
Query: 311 ADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSK 370
++GSGKTL Y LP I + + L + P V+ILAPT ELA Q+ + K
Sbjct: 162 IAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLILAPTRELAVQIQTEISKFGK 217
Query: 371 CGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEG 414
R+ V GG + Q+ +L GV+V IATPGR + +++ G
Sbjct: 218 SS-RIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAG 260
>sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp2
PE=3 SV=2
Length = 547
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 253 KQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCIL 310
+++H+ + G R ++F E G Y++ +K Q F RP+ IQ+ +P + G+ +
Sbjct: 104 RKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVG 163
Query: 311 ADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSK 370
++GSGKTL Y LP I + + L + P V+ILAPT ELA Q+ + K
Sbjct: 164 IAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLILAPTRELAVQIQAEISKFGK 219
Query: 371 CGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEG 414
R+ V GG + Q+ +L GV+V IATPGR + +++ G
Sbjct: 220 SS-RIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAG 262
>sp|A2QC74|DBP2_ASPNC ATP-dependent RNA helicase dbp2 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp2 PE=3 SV=1
Length = 565
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 249 TDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGK 306
D +++H+ + G R ++F E G Y++ +K Q F RP+ IQ+ +P + G+
Sbjct: 116 VDEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGR 175
Query: 307 SCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCR 366
+ ++GSGKTL Y LP I + + L + P V+ILAPT ELA Q+ +
Sbjct: 176 DVVGIAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLILAPTRELAVQIQAEIS 231
Query: 367 SLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEG 414
K R+ V GG + Q+ +L GV+V IATPGR + +++ G
Sbjct: 232 KFGKSS-RIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAG 278
>sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=ded1 PE=3 SV=1
Length = 678
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F D++IE++K ++ P+ +Q + P V+ G+ + Q+GSGKT +L P++
Sbjct: 188 AFTNPPLDDHLIENIKLAHYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILS 247
Query: 329 RLRQEELQ----------GLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSM 378
+ Q G + P +ILAPT EL SQ+ R + R
Sbjct: 248 QAYQNGPSAAPAQAGGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRSW-VRPC 306
Query: 379 VVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
VV GG +QL ++ G D+L+ATPGR + LI+ G + L+N+++
Sbjct: 307 VVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKY 351
>sp|Q3MSQ8|DDX4_RANLE Probable ATP-dependent RNA helicase DDX4 OS=Rana lessonae GN=ddx4
PE=2 SV=1
Length = 724
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 89/155 (57%), Gaps = 1/155 (0%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F+E D + +++ + +++ + IQ + P +V G+ + Q+GSGKT A+LLP++
Sbjct: 287 TFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILA 346
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
L + ++ + T P +I+APT EL +Q+ + R S G R +V+ GG +
Sbjct: 347 HLMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLDARKFSY-GTCVRPVVIYGGTQMFH 405
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
L+ + EG ++L ATPGR + +I++ + L LR+
Sbjct: 406 SLKQISEGCNILCATPGRLLDVIRKEKIGLTKLRY 440
>sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46
PE=2 SV=1
Length = 1018
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
K++ + G S ++ +LK+ N+ +P+ IQA A P ++ G+ I ++GSGKT+A+LLP+
Sbjct: 340 KTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 399
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
+ + + G ++ P VI+ PT ELA Q+ C+ SK + R + V GG
Sbjct: 400 RHILDQRPVGEAE----GPLAVIMTPTRELALQITKECKKFSKS-LALRVVCVYGGTGIS 454
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEGILQLINLR 422
Q+ L+ G ++++ TPGR + ++ ++ NLR
Sbjct: 455 EQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLR 489
>sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 OS=Dictyostelium
discoideum GN=ddx52 PE=3 SV=1
Length = 668
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 242 HNLQYEPTDCPKQRHKYSA-DGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFP 300
H ++ + TD P ++S + F RK Y++ ++ + PS IQ P
Sbjct: 181 HRIKVDGTDIPDPMTEFSQLENRFKVRK---------YLLNNINEIGYKEPSPIQMQVIP 231
Query: 301 PVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQ 360
+++ + + +GSGKT ++ +P++Q L + + +G R VI+APT ELA Q
Sbjct: 232 ILLKEREVVAIAPTGSGKTASFSIPILQALYEPKKEGF--------RSVIIAPTRELAQQ 283
Query: 361 VLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLIN 420
+ N R LSK G PFR V++ ++ ENL + D+LI TP R ++LIKE +L L
Sbjct: 284 IYRNFRLLSK-GKPFRICVLSKNLHNQSTNENLIKNYDILITTPLRLVYLIKENLLSLNK 342
Query: 421 LRW 423
+ +
Sbjct: 343 VEY 345
>sp|Q4PHU9|DBP2_USTMA ATP-dependent RNA helicase DBP2 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP2 PE=3 SV=2
Length = 552
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF E G DY++ +K+ F PS IQ+ A+P + G+ + ++GSGKT+ + LP +
Sbjct: 131 SFDEAGFPDYILSEIKKMGFSEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMV 190
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+ Q L K G P +ILAPT ELA+Q+ C R+ V GG +
Sbjct: 191 HINA---QPLLKPGDG-PIALILAPTRELANQIQVECNRFGGSS-RLRTCAVYGGVPKGP 245
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEG 414
Q+ +LQ G ++ IATPGR + ++ G
Sbjct: 246 QIRDLQRGAEICIATPGRLIDMVDAG 271
>sp|Q6C7X8|DBP10_YARLI ATP-dependent RNA helicase DBP10 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=DBP10 PE=3 SV=1
Length = 926
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF LG S +++++ R+ F +P+ IQ P V+EGK + ++GSGKT A++LP+++
Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+L+ S R VIL+P+ ELA Q L + S G R ++ GG +
Sbjct: 163 KLK-------VHSAKVGARAVILSPSRELALQTLKVVKDFS-AGTDLRLAMLVGGDSLEE 214
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
Q + + D++IATPGRF+ L E L L ++ +
Sbjct: 215 QFKMMMSNPDIIIATPGRFLHLKVEMELSLASVEY 249
>sp|Q2U070|DBP2_ASPOR ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp2 PE=3 SV=1
Length = 554
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 241 IHNLQYEPTDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMA 298
+ N D +++ + S G R ++F E G Y++ +K Q F RP+ IQ+
Sbjct: 101 VANRSQRDVDEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQGFERPTAIQSQG 160
Query: 299 FPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELA 358
+P + G+ + ++GSGKTL+Y LP I + + L + P V++LAPT ELA
Sbjct: 161 WPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLL----APGDGPIVLVLAPTRELA 216
Query: 359 SQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEG 414
Q+ + K R+ V GG + Q+ +L GV+V IATPGR + +++ G
Sbjct: 217 VQIQAEITKFGKSS-RIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAG 271
>sp|A7TJK8|PRP5_VANPO Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=PRP5 PE=3 SV=1
Length = 872
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 88/143 (61%), Gaps = 4/143 (2%)
Query: 270 FKELGC-SDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+ +LG +D M K + P+ IQ+ A P ++ G+ I ++GSGKT++Y+LP+++
Sbjct: 278 WSQLGLPTDIMNLITKELKYDEPTAIQSQAIPAIMSGRDLIGISKTGSGKTISYILPMLR 337
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+++ + + LSK+ +G P +ILAPT ELA Q+ +K R++ TGG K
Sbjct: 338 QIKAQ--RTLSKNETG-PLGLILAPTRELALQINEEVEKFTKQDRSIRTICCTGGSEMKK 394
Query: 389 QLENLQEGVDVLIATPGRFMFLI 411
Q+ +L+ GV++++ATPGR + ++
Sbjct: 395 QINDLKRGVEIVVATPGRLIDIL 417
>sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana
GN=RH37 PE=2 SV=2
Length = 633
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 91/159 (57%), Gaps = 4/159 (2%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F E+ + + +++R +++P+ +Q A P ++EG+ + Q+GSGKT A+ P+I
Sbjct: 160 TFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIIS 219
Query: 329 R-LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLS-KCGVPFRSMVVTGGFRQ 386
++ + +Q S + P VIL+PT ELASQ+ + S + GV + +V GG
Sbjct: 220 GIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGV--KVVVAYGGTPI 277
Query: 387 KTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRWYA 425
QL L+ GVD+L+ATPGR L++ + + +R+ A
Sbjct: 278 NQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLA 316
>sp|Q12389|DBP10_YEAST ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DBP10 PE=1 SV=2
Length = 995
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 243 NLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPV 302
N + + K +HK + SF G S ++ ++KR+ F +P+ IQ P +
Sbjct: 121 NEYFSTNNLEKTKHK---------KGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLI 171
Query: 303 VEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVL 362
++ + + ++GSGKT A++LP++++L+ S S R VIL+P+ ELA Q
Sbjct: 172 LQSRDIVGMARTGSGKTAAFILPMVEKLK-------SHSGKIGARAVILSPSRELAMQTF 224
Query: 363 SNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLR 422
+ + ++ G RS+++TGG + Q + DV+IATPGRF+ L E L L ++
Sbjct: 225 NVFKDFAR-GTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVE 283
Query: 423 W 423
+
Sbjct: 284 Y 284
>sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP2 PE=3 SV=1
Length = 544
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 5/150 (3%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F E G DY+++ +K + F +P+ IQ +P + G+ + +GSGKTL+Y LP I
Sbjct: 111 TFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIV 170
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+ + L S P V++LAPT ELA Q+ C K R+ V GG +
Sbjct: 171 HINAQPLL----SPGDGPIVLVLAPTRELAVQIQKECSKFGKSS-RIRNTCVYGGVPRGQ 225
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQL 418
Q+ L G +++IATPGR + +++ G L
Sbjct: 226 QIRELIRGAEIVIATPGRLIDMLEAGKTNL 255
>sp|A6ZXU0|DBP10_YEAS7 ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DBP10 PE=3 SV=1
Length = 995
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 243 NLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPV 302
N + + K +HK + SF G S ++ ++KR+ F +P+ IQ P +
Sbjct: 121 NEYFSTNNLEKTKHK---------KGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLI 171
Query: 303 VEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVL 362
++ + + ++GSGKT A++LP++++L+ S S R VIL+P+ ELA Q
Sbjct: 172 LQSRDIVGMARTGSGKTAAFILPMVEKLK-------SHSGKIGARAVILSPSRELAMQTF 224
Query: 363 SNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLR 422
+ + ++ G RS+++TGG + Q + DV+IATPGRF+ L E L L ++
Sbjct: 225 NVFKDFAR-GTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVE 283
Query: 423 W 423
+
Sbjct: 284 Y 284
>sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ded1
PE=3 SV=1
Length = 676
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F D++I ++K + P+ +Q + P V+ G+ + Q+GSGKT +L P++
Sbjct: 191 AFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILS 250
Query: 329 RLRQEELQGLSKSTSGS----------PRVVILAPTAELASQVLSNCRSLSKCGVPFRSM 378
+ Q + SG P +ILAPT EL SQ+ R + R
Sbjct: 251 QAFQTGPSAVPAQASGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRSW-VRPC 309
Query: 379 VVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
VV GG +QL ++ G D+L+ATPGR + LI+ G + L+N+++
Sbjct: 310 VVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKY 354
>sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp10 PE=3 SV=1
Length = 929
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 91/154 (59%), Gaps = 8/154 (5%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G + ++++++ R+ F P+ IQ P +++G+ + ++GSGKT A+++P+I++
Sbjct: 91 FQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAFVIPMIEK 150
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ S ST R +IL+P+ ELA Q L + L K G +S+++ GG + Q
Sbjct: 151 LK-------SHSTKVGARGLILSPSRELALQTLKVVKELGK-GTDLKSVLLVGGDSLEEQ 202
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
+ D++IATPGRF+ L E L L ++R+
Sbjct: 203 FSLMAGNPDIVIATPGRFLHLKVEMNLDLSSIRY 236
>sp|A7TTT5|DBP2_VANPO ATP-dependent RNA helicase DBP2 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP2 PE=3 SV=1
Length = 441
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF E G DY++E +K + F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 114 SFDEAGFPDYVLEEVKAEGFEKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIV 173
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVP--FRSMVVTGGFRQ 386
+ + L S P V++LAPT ELA Q+ C SK G R+ V GG +
Sbjct: 174 HINAQPLL----SPGDGPIVLVLAPTRELAVQIQKEC---SKFGSSSRIRNSCVYGGVPR 226
Query: 387 KTQLENLQEGVDVLIATPGRFMFLIKEGILQL 418
Q+ L G +++IATPGR + +++ G L
Sbjct: 227 GQQIRELSRGAEIVIATPGRLIDMLEIGKTNL 258
>sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP10 PE=3 SV=1
Length = 900
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 89/154 (57%), Gaps = 8/154 (5%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ LG + +++++ R+ F P+ IQ P V++ + + ++GSGKT A+++P+I++
Sbjct: 88 FQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEK 147
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ S S R +IL+P+ ELA Q L + L + G +S+++ GG + Q
Sbjct: 148 LK-------SHSAKFGSRALILSPSRELALQTLKVVKELGR-GTDLKSVLLVGGDSLEEQ 199
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
E + D++IATPGRF+ L E L L ++R+
Sbjct: 200 FEYMASNPDIIIATPGRFLHLKVEMSLDLSSIRY 233
>sp|A1CH78|DED1_ASPCL ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=ded1 PE=3 SV=1
Length = 681
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
+F D++I ++K + P+ +Q + P V+ G+ + Q+GSGKT +L P++
Sbjct: 189 NAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPIL 248
Query: 328 QRLRQEELQGLSKSTSGS----------PRVVILAPTAELASQVLSNCRSLSKCGVPFRS 377
+ Q+ + SG P +ILAPT EL SQ+ R + R
Sbjct: 249 SQAFQKGPSAVPAQASGQMSYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRSW-VRP 307
Query: 378 MVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRW 423
VV GG +QL ++ G D+L+ATPGR + LI+ G + L+N+ +
Sbjct: 308 CVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNINY 353
>sp|A4R8B5|HAS1_MAGO7 ATP-dependent RNA helicase HAS1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=HAS1 PE=3 SV=2
Length = 587
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 92/155 (59%), Gaps = 6/155 (3%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
++F EL S+ +++++ F + ++IQ PP++ GK + A ++GSGKTLA+L+P +
Sbjct: 112 QAFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAV 171
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
+ LR L+ ++ +G V++++PT ELA Q+ R L K +V+ GG ++
Sbjct: 172 EMLRS--LKFKPRNGTG---VIVVSPTRELALQIFGVARDLMKHHSQTYGIVI-GGANRR 225
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEGILQLINLR 422
+ E L +GV++LIATPGR + ++ NLR
Sbjct: 226 AEAEKLSKGVNLLIATPGRLLDHLQNTPFVFKNLR 260
>sp|A4QSS5|DBP2_MAGO7 ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1
Length = 548
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 217 YNSRSNKHEKSGTKIDRGWRSGGSIHNLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCS 276
Y + +S ++D+ R H++ + +D PK ++F E G
Sbjct: 90 YKEHPDVTNRSQAEVDKFRRE----HSMAVQGSDVPK------------PVETFDEAGFP 133
Query: 277 DYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQ 336
Y+++ +K Q F P+ IQ+ +P + G+ + ++GSGKTL Y LP I + + L
Sbjct: 134 RYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLL 193
Query: 337 GLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEG 396
+ P V+ILAPT ELA Q+ + K R+ V GG + Q+ +L G
Sbjct: 194 ----APGDGPIVLILAPTRELAVQIQAEISKFGKSS-RIRNTCVYGGVPKGPQIRDLSRG 248
Query: 397 VDVLIATPGRFMFLIKEG 414
V+V IATPGR + +++ G
Sbjct: 249 VEVCIATPGRLIDMLESG 266
>sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP2 PE=3 SV=1
Length = 540
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F+E G DY++ ++R F PS IQ A+P + G+ + ++GSGKT+++ LP +
Sbjct: 111 TFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMV 170
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+ + L + P V+ILAPT ELA Q+ + + R+ + GG +
Sbjct: 171 HINAQPLL----APGDGPIVLILAPTRELAVQIQTEATKFGQSS-RIRNTAIYGGAPKGP 225
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEG 414
Q+ +LQ GV++ +ATPGR + +++ G
Sbjct: 226 QIRDLQRGVEICVATPGRLIDMLETG 251
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,213,994
Number of Sequences: 539616
Number of extensions: 7893659
Number of successful extensions: 29690
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 26316
Number of HSP's gapped (non-prelim): 1521
length of query: 439
length of database: 191,569,459
effective HSP length: 121
effective length of query: 318
effective length of database: 126,275,923
effective search space: 40155743514
effective search space used: 40155743514
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)