BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013624
MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK
SRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVSGPISSGGPGSSSMKKTNSGPL
NKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLD
SSGSIKMNSSSIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFILDTDL
RTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRHFTWG
LRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFIRWLG
QKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCIFPAS
LEGIILRCEDTSNNDVIPV

High Scoring Gene Products

Symbol, full name Information P value
AT1G16860 protein from Arabidopsis thaliana 5.7e-178
AT1G78880 protein from Arabidopsis thaliana 7.2e-178
AT4G22290 protein from Arabidopsis thaliana 1.6e-94

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013624
        (439 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2015646 - symbol:AT1G16860 species:3702 "Arabi...   900  5.7e-178  2
TAIR|locus:2037533 - symbol:AT1G78880 "AT1G78880" species...   911  7.2e-178  2
TAIR|locus:2132075 - symbol:AT4G22290 "AT4G22290" species...   729  1.6e-94   2


>TAIR|locus:2015646 [details] [associations]
            symbol:AT1G16860 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IDA] GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC051629
            EMBL:AY050887 EMBL:AY117261 EMBL:BT000665 IPI:IPI00537841
            PIR:H86303 RefSeq:NP_564009.1 UniGene:At.21790 PaxDb:Q9FZ45
            PRIDE:Q9FZ45 EnsemblPlants:AT1G16860.1 GeneID:838257
            KEGG:ath:AT1G16860 TAIR:At1g16860 eggNOG:NOG257904
            HOGENOM:HOG000242640 InParanoid:Q9FZ45 OMA:MIVPSSE PhylomeDB:Q9FZ45
            ProtClustDB:CLSN2679796 Genevestigator:Q9FZ45 Uniprot:Q9FZ45
        Length = 474

 Score = 900 (321.9 bits), Expect = 5.7e-178, Sum P(2) = 5.7e-178
 Identities = 165/203 (81%), Positives = 182/203 (89%)

Query:   237 DTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRH 296
             D DLRTAK+GQ VKVTGVVTCGNVPLESSF RVPRCVYTST LYEYR WGSKPAN  HRH
Sbjct:   272 DADLRTAKNGQHVKVTGVVTCGNVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRH 331

Query:   297 FTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFI 356
             FTWGLRS ERHVVDFYISDFQSGLRALVKTGSGA+VTP VDDSVVID K  ++ +SP+F+
Sbjct:   332 FTWGLRSSERHVVDFYISDFQSGLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFV 391

Query:   357 RWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCI 416
             RWLG+K+L+SDDR+MRLKEGYIKEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW +C 
Sbjct:   392 RWLGKKNLTSDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCT 451

Query:   417 FPASLEGIILRCEDTSNNDVIPV 439
             FP SLEGI+LRCED+SN D IPV
Sbjct:   452 FPTSLEGIVLRCEDSSNVDAIPV 474

 Score = 850 (304.3 bits), Expect = 5.7e-178, Sum P(2) = 5.7e-178
 Identities = 168/236 (71%), Positives = 185/236 (78%)

Query:     1 MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
             MGSRYPSHQLSNGLFVSGRPEQPKE+APTMS+VAMPYTGGDIK+SGELGKMFDIP D  K
Sbjct:     1 MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPADGTK 60

Query:    61 SRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVXXXXXXXXXXXXXMKKTNSGPL 120
             SRKSGPI GAPSR+GSFAG A      P A GR   ++             MKKTNSGPL
Sbjct:    61 SRKSGPIPGAPSRSGSFAGTAQSGPGAPMATGRMSGSLASAGSVS------MKKTNSGPL 114

Query:   121 NKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLD 180
             +KHGEP+KKSSGPQSGG TRQNSG IP  LPATGLITSGPI+SGPLNSSGAPRK+SG LD
Sbjct:   115 SKHGEPLKKSSGPQSGGVTRQNSGSIP-ILPATGLITSGPITSGPLNSSGAPRKVSGPLD 173

Query:   181 XXXXXXXXXXXIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL 236
                        +  NQAVTT+  EDD+S  K+FPKPVLWLV+LIF+MGF+AGGFIL
Sbjct:   174 SSGLMKSHMPTVVHNQAVTTLGPEDDFSCLKSFPKPVLWLVVLIFIMGFLAGGFIL 229


>TAIR|locus:2037533 [details] [associations]
            symbol:AT1G78880 "AT1G78880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            GO:GO:0006508 GO:GO:0008233 EMBL:AC005679 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY072176 EMBL:AY096686 EMBL:AY120734
            EMBL:BT000364 IPI:IPI00537430 PIR:C96818 RefSeq:NP_178009.1
            UniGene:At.21193 PaxDb:Q9ZVA7 PRIDE:Q9ZVA7
            EnsemblPlants:AT1G78880.1 GeneID:844225 KEGG:ath:AT1G78880
            TAIR:At1g78880 eggNOG:NOG292696 InParanoid:Q9ZVA7 OMA:WNISCER
            PhylomeDB:Q9ZVA7 ArrayExpress:Q9ZVA7 Genevestigator:Q9ZVA7
            Uniprot:Q9ZVA7
        Length = 468

 Score = 911 (325.7 bits), Expect = 7.2e-178, Sum P(2) = 7.2e-178
 Identities = 166/203 (81%), Positives = 184/203 (90%)

Query:   237 DTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRH 296
             D DLRTAK+GQ+VKVTGVVTCGNVPLESSF RVPRCVYTST LYEYR WGSKPAN  HR 
Sbjct:   266 DADLRTAKNGQYVKVTGVVTCGNVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANASHRR 325

Query:   297 FTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFI 356
             FTWGLRS ERHVVDFYISDFQSGLRALVKTG+GA+VTP VDDSVVID KP N+  SP+F+
Sbjct:   326 FTWGLRSAERHVVDFYISDFQSGLRALVKTGNGAKVTPLVDDSVVIDFKPGNEQASPDFV 385

Query:   357 RWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCI 416
             RWLG+K+L++DDR+MRLKEGYIKEGSTVSV+G+VQRNDNVLMIVP  EP+A GWQW+KC 
Sbjct:   386 RWLGKKNLTNDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPTTEPLAAGWQWSKCT 445

Query:   417 FPASLEGIILRCEDTSNNDVIPV 439
             FPASLEGI+LRCED+SN D IPV
Sbjct:   446 FPASLEGIVLRCEDSSNVDAIPV 468

 Score = 838 (300.0 bits), Expect = 7.2e-178, Sum P(2) = 7.2e-178
 Identities = 169/236 (71%), Positives = 182/236 (77%)

Query:     1 MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPMDSAK 60
             MGSRY SHQLSNGLFVSGRPEQPKEK PTMSSVAMPYTGGDIKKSGELGKMFDIP D  K
Sbjct:     1 MGSRYASHQLSNGLFVSGRPEQPKEKPPTMSSVAMPYTGGDIKKSGELGKMFDIPTDGTK 60

Query:    61 SRKSGPITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVXXXXXXXXXXXXXMKKTNSGPL 120
             SRKSGPITG  SR+G+       SG +PNA GR   N+             MKKTNSGPL
Sbjct:    61 SRKSGPITGGSSRSGA------QSGPVPNATGRMSGNLASAGSNS------MKKTNSGPL 108

Query:   121 NKHGEPIKKSSGPQSGGATRQNSGPIPPSLPATGLITSGPISSGPLNSSGAPRKLSGSLD 180
             +KHGEP+KKSSGPQSGG TRQNSGPIP  LP TGLITSGPI+SGPLNSSGAPRK+SG LD
Sbjct:   109 SKHGEPLKKSSGPQSGGVTRQNSGPIP-ILPTTGLITSGPITSGPLNSSGAPRKISGPLD 167

Query:   181 XXXXXXXXXXXIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFIL 236
                        +  NQAVTT+  EDD+S  K+FPKPVLWLVILIFVMGF+AGGFIL
Sbjct:   168 YSGSMKTHMPSVVHNQAVTTLAPEDDFSCMKSFPKPVLWLVILIFVMGFLAGGFIL 223


>TAIR|locus:2132075 [details] [associations]
            symbol:AT4G22290 "AT4G22290" species:3702 "Arabidopsis
            thaliana" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=ISS] EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0006508 GO:GO:0008233 UniGene:At.47267 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY140104 EMBL:BT006592 IPI:IPI00534218
            RefSeq:NP_193960.2 UniGene:At.71029 PRIDE:Q8L6X7
            EnsemblPlants:AT4G22290.1 GeneID:828324 KEGG:ath:AT4G22290
            TAIR:At4g22290 InParanoid:Q8L6X7 OMA:AGRIQSH PhylomeDB:Q8L6X7
            Genevestigator:Q8L6X7 Uniprot:Q8L6X7
        Length = 445

 Score = 729 (261.7 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
 Identities = 131/203 (64%), Positives = 165/203 (81%)

Query:   237 DTDLRTAKSGQFVKVTGVVTCGNVPLESSFRRVPRCVYTSTSLYEYRAWGSKPANPKHRH 296
             D +LR A  GQFVKVTGVVTCG++PLESSF+R PRCVY ST LYEY+ +G K ANPKHR 
Sbjct:   243 DAELRGAIDGQFVKVTGVVTCGSIPLESSFQRTPRCVYVSTELYEYKGFGGKSANPKHRC 302

Query:   297 FTWGLRSLERHVVDFYISDFQSGLRALVKTGSGARVTPFVDDSVVIDIKPENKDLSPEFI 356
             F+WG R  E++V DFYISDFQSGLRALVK G G++V+PFV  + V ++  +NKDLSP F+
Sbjct:   303 FSWGSRHAEKYVSDFYISDFQSGLRALVKAGYGSKVSPFVKPATVANVTTQNKDLSPSFL 362

Query:   357 RWLGQKSLSSDDRLMRLKEGYIKEGSTVSVMGIVQRNDNVLMIVPPPEPIATGWQWTKCI 416
             +WL  ++LS+DDR+MRLKEGYIKEGSTVSVMG+V+R+DNVLMIVPP E +++G +W  C+
Sbjct:   363 KWLSDRNLSADDRVMRLKEGYIKEGSTVSVMGMVRRHDNVLMIVPPAEAVSSGCRWWHCL 422

Query:   417 FPASLEGIILRCEDTSNNDVIPV 439
             FP   +G+I+ C+D  N DVIPV
Sbjct:   423 FPTYADGLIITCDDNQNADVIPV 445

 Score = 231 (86.4 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
 Identities = 70/169 (41%), Positives = 93/169 (55%)

Query:     1 MGSRYPSHQLSNGLFVSGRPEQPKEKAPTMSSVAMPYTGGDIKKSGELGKMFDIPM-DSA 59
             M  R  SHQL NGL+VSG+ EQPKE+ PTM++ A+PYTGGDIKKSGELG+MFDI + DSA
Sbjct:     1 MAGRIQSHQLPNGLYVSGKLEQPKERPPTMAARAVPYTGGDIKKSGELGRMFDISVVDSA 60

Query:    60 KSRKSGP-ITGAPSRTGSFAGAATHSGSIPNAAGRAGYNVXXXXXXXXXXXXXMKKTNSG 118
               +   P I G     G+ +G  +   + P  +G +  N              +KK  SG
Sbjct:    61 SFQGPPPLIVG-----GNSSGGTSRLQAPPRVSGSSS-NPNSGSVRSGPNSGSVKKF-SG 113

Query:   119 PLNKHGEP---IKK----SSGPQSGGATRQNSGPIPPSLPATGLITSGP 160
             PL++  +P   I      SSGP   G+ R  SG +   L  + L +S P
Sbjct:   114 PLSQL-QPTGLITSGSLGSSGPILSGSRR--SGQLDHQL--SNLASSKP 157

 Score = 129 (50.5 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
 Identities = 38/106 (35%), Positives = 55/106 (51%)

Query:   131 SGPQSGGATRQNSGPIPPSLPATGLITSGPI-SSGPLNSSGAPRKLSGSLDXXXXXXXXX 189
             SGP SG + ++ SGP+    P TGLITSG + SSGP+  SG+ R  SG LD         
Sbjct:   101 SGPNSG-SVKKFSGPLSQLQP-TGLITSGSLGSSGPI-LSGSRR--SGQLDHQLSNLASS 155

Query:   190 XXIAQNQAVTTITQEDDYSFRKNFPKPVLWLVILIFVMGFIAGGFI 235
                    +VT++   D        PK ++W V+++  MG + G F+
Sbjct:   156 KP-KYGSSVTSLNV-DPVRVGFKVPKAMVWAVLIVAAMGLLVGAFL 199

 Score = 61 (26.5 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
 Identities = 20/57 (35%), Positives = 28/57 (49%)

Query:   124 GEPIKKSSGPQSGGATRQNSGPIPPSLPATGLI-TSGPISSGPLNSSGAPRKLSGSL 179
             G P     G  SGG +R  +   PP +  +     SG + SGP  +SG+ +K SG L
Sbjct:    64 GPPPLIVGGNSSGGTSRLQA---PPRVSGSSSNPNSGSVRSGP--NSGSVKKFSGPL 115


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.134   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      439       415   0.00081  118 3  11 22  0.44    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  251 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  36.80u 0.13s 36.93t   Elapsed:  00:00:02
  Total cpu time:  36.80u 0.13s 36.93t   Elapsed:  00:00:02
  Start:  Sat May 11 08:28:31 2013   End:  Sat May 11 08:28:33 2013

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