Query 013625
Match_columns 439
No_of_seqs 141 out of 1645
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 14:04:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013625.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013625hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qa2_A CABE, polyketide oxygen 100.0 5E-40 1.7E-44 332.0 38.3 347 4-429 33-384 (499)
2 2qa1_A PGAE, polyketide oxygen 100.0 1.1E-39 3.7E-44 329.7 39.4 347 4-429 32-383 (500)
3 3fmw_A Oxygenase; mithramycin, 100.0 1.8E-40 6.3E-45 339.5 28.2 352 4-429 70-429 (570)
4 2x3n_A Probable FAD-dependent 100.0 1.9E-40 6.5E-45 327.0 27.4 345 4-419 27-384 (399)
5 3rp8_A Flavoprotein monooxygen 100.0 2.7E-39 9.3E-44 319.6 30.5 350 4-424 44-400 (407)
6 4hb9_A Similarities with proba 100.0 2.8E-38 9.6E-43 312.3 21.2 341 4-408 22-400 (412)
7 1pn0_A Phenol 2-monooxygenase; 100.0 4.4E-37 1.5E-41 320.0 29.7 332 5-396 35-426 (665)
8 1k0i_A P-hydroxybenzoate hydro 100.0 2.2E-37 7.6E-42 304.6 25.9 356 5-428 24-388 (394)
9 3ihg_A RDME; flavoenzyme, anth 100.0 8.6E-36 2.9E-40 304.6 26.5 322 4-394 26-374 (535)
10 2r0c_A REBC; flavin adenine di 100.0 3.1E-35 1E-39 300.8 28.6 332 4-413 47-410 (549)
11 2vou_A 2,6-dihydroxypyridine h 100.0 1.5E-35 5E-40 291.8 25.1 314 4-396 26-371 (397)
12 2dkh_A 3-hydroxybenzoate hydro 100.0 1.1E-34 3.8E-39 301.5 32.9 328 5-396 55-417 (639)
13 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.6E-34 5.5E-39 282.7 23.4 300 4-386 32-343 (379)
14 3c96_A Flavin-containing monoo 100.0 8.6E-34 2.9E-38 280.4 24.7 315 4-387 25-366 (410)
15 2xdo_A TETX2 protein; tetracyc 100.0 7.8E-33 2.7E-37 272.5 23.7 328 4-400 47-393 (398)
16 3e1t_A Halogenase; flavoprotei 100.0 1.2E-31 4.1E-36 272.2 31.9 362 4-430 28-402 (512)
17 3oz2_A Digeranylgeranylglycero 100.0 3.3E-30 1.1E-34 252.9 31.9 317 4-394 25-351 (397)
18 3i3l_A Alkylhalidase CMLS; fla 100.0 1.2E-30 4.2E-35 267.3 29.6 328 4-395 44-385 (591)
19 3nix_A Flavoprotein/dehydrogen 100.0 5.6E-30 1.9E-34 253.9 30.1 348 4-429 26-385 (421)
20 3atr_A Conserved archaeal prot 100.0 9.6E-30 3.3E-34 254.5 27.0 312 4-395 27-357 (453)
21 3cgv_A Geranylgeranyl reductas 100.0 2.6E-29 8.9E-34 247.0 28.4 319 4-396 25-353 (397)
22 3c4a_A Probable tryptophan hyd 100.0 1.5E-30 5E-35 254.7 14.5 313 5-410 24-353 (381)
23 2weu_A Tryptophan 5-halogenase 100.0 9.4E-26 3.2E-30 229.1 33.7 240 86-396 164-410 (511)
24 2pyx_A Tryptophan halogenase; 100.0 3.1E-26 1.1E-30 233.2 29.8 313 4-394 40-416 (526)
25 2aqj_A Tryptophan halogenase, 99.9 7.7E-25 2.6E-29 223.6 30.2 235 87-393 157-399 (538)
26 2gmh_A Electron transfer flavo 99.9 5.7E-25 1.9E-29 225.9 28.7 319 6-395 64-427 (584)
27 2e4g_A Tryptophan halogenase; 99.9 1.3E-24 4.3E-29 222.3 30.7 310 5-396 50-433 (550)
28 3ihm_A Styrene monooxygenase A 99.9 1.7E-22 5.8E-27 200.4 19.8 350 4-427 43-408 (430)
29 2bry_A NEDD9 interacting prote 99.7 1.4E-17 4.7E-22 167.9 16.5 294 4-381 113-450 (497)
30 1yvv_A Amine oxidase, flavin-c 99.5 1.1E-12 3.8E-17 125.2 22.7 194 111-358 120-329 (336)
31 1ryi_A Glycine oxidase; flavop 98.5 8.2E-07 2.8E-11 85.8 12.6 70 90-181 159-229 (382)
32 2gag_B Heterotetrameric sarcos 98.3 1.1E-05 3.6E-10 78.6 16.3 116 91-230 170-286 (405)
33 3ps9_A TRNA 5-methylaminomethy 98.3 3.6E-06 1.2E-10 87.8 13.1 63 90-173 412-474 (676)
34 1y56_B Sarcosine oxidase; dehy 98.2 1.6E-05 5.6E-10 76.6 14.2 69 91-181 145-215 (382)
35 3nyc_A D-arginine dehydrogenas 98.1 1.4E-05 4.8E-10 76.9 11.9 70 90-181 149-219 (381)
36 3nlc_A Uncharacterized protein 98.0 1.1E-05 3.8E-10 81.3 8.1 69 92-181 217-290 (549)
37 2qcu_A Aerobic glycerol-3-phos 98.0 0.00045 1.5E-08 69.2 19.3 114 91-225 145-266 (501)
38 2gf3_A MSOX, monomeric sarcosi 97.9 9.3E-05 3.2E-09 71.4 13.7 68 90-179 145-213 (389)
39 2oln_A NIKD protein; flavoprot 97.9 0.0004 1.4E-08 67.2 17.3 68 91-180 149-217 (397)
40 1rp0_A ARA6, thiazole biosynth 97.9 0.0001 3.5E-09 68.0 11.7 66 93-178 117-197 (284)
41 3kkj_A Amine oxidase, flavin-c 97.8 0.0015 5.2E-08 58.7 18.4 37 316-358 293-329 (336)
42 3pvc_A TRNA 5-methylaminomethy 97.8 0.0001 3.5E-09 76.9 10.9 63 90-173 407-470 (689)
43 3jsk_A Cypbp37 protein; octame 97.7 0.00012 4.1E-09 69.0 10.0 138 5-178 103-257 (344)
44 2ywl_A Thioredoxin reductase r 97.6 0.00016 5.3E-09 61.7 8.4 67 92-181 53-119 (180)
45 4dgk_A Phytoene dehydrogenase; 97.6 0.00072 2.5E-08 67.6 14.4 64 95-179 221-285 (501)
46 1qo8_A Flavocytochrome C3 fuma 97.5 0.00028 9.6E-09 71.8 9.3 67 92-178 247-318 (566)
47 3c4n_A Uncharacterized protein 97.4 0.00033 1.1E-08 68.1 8.3 71 90-182 167-248 (405)
48 2i0z_A NAD(FAD)-utilizing dehy 97.4 0.00043 1.5E-08 68.3 8.8 68 94-182 133-212 (447)
49 3ces_A MNMG, tRNA uridine 5-ca 97.3 0.00079 2.7E-08 68.7 10.4 70 90-179 119-188 (651)
50 3v76_A Flavoprotein; structura 97.3 0.00043 1.5E-08 67.5 8.2 68 92-181 129-207 (417)
51 3i6d_A Protoporphyrinogen oxid 97.3 0.011 3.9E-07 58.1 17.8 56 96-174 236-291 (470)
52 3axb_A Putative oxidoreductase 97.3 0.003 1E-07 62.1 13.5 85 90-181 176-264 (448)
53 3da1_A Glycerol-3-phosphate de 97.2 0.0061 2.1E-07 61.8 15.8 70 91-181 166-242 (561)
54 2cul_A Glucose-inhibited divis 97.2 0.00046 1.6E-08 61.5 6.7 67 93-180 66-133 (232)
55 1y0p_A Fumarate reductase flav 97.2 0.00032 1.1E-08 71.5 5.6 64 93-176 253-321 (571)
56 3ab1_A Ferredoxin--NADP reduct 97.2 0.00054 1.9E-08 65.3 6.9 67 92-178 71-137 (360)
57 2gjc_A Thiazole biosynthetic e 97.2 0.0023 8E-08 59.8 10.8 130 5-178 89-245 (326)
58 3dme_A Conserved exported prot 97.1 0.0012 4.1E-08 62.7 8.4 71 90-181 145-220 (369)
59 3cp8_A TRNA uridine 5-carboxym 97.1 0.003 1E-07 64.4 11.5 67 90-177 112-179 (641)
60 2zxi_A TRNA uridine 5-carboxym 97.0 0.003 1E-07 64.3 10.9 68 90-178 118-186 (637)
61 2zbw_A Thioredoxin reductase; 97.0 0.00078 2.7E-08 63.4 6.4 67 92-179 62-128 (335)
62 3nrn_A Uncharacterized protein 96.9 0.031 1.1E-06 54.2 16.9 61 95-179 189-249 (421)
63 1c0p_A D-amino acid oxidase; a 96.8 0.017 5.7E-07 54.9 14.0 51 89-173 136-186 (363)
64 3dje_A Fructosyl amine: oxygen 96.8 0.0018 6.2E-08 63.4 7.4 62 91-173 157-222 (438)
65 2gqf_A Hypothetical protein HI 96.7 0.0037 1.3E-07 60.6 8.2 71 93-181 107-188 (401)
66 3qj4_A Renalase; FAD/NAD(P)-bi 96.6 0.042 1.4E-06 51.6 15.1 50 96-169 113-162 (342)
67 2uzz_A N-methyl-L-tryptophan o 96.6 0.0044 1.5E-07 59.1 8.0 62 90-173 144-205 (372)
68 3lov_A Protoporphyrinogen oxid 96.6 0.026 9E-07 55.7 13.6 54 96-173 237-290 (475)
69 4a9w_A Monooxygenase; baeyer-v 96.2 0.0084 2.9E-07 56.4 7.3 61 91-173 72-133 (357)
70 3ka7_A Oxidoreductase; structu 96.2 0.15 5.1E-06 49.3 16.3 61 95-178 196-257 (425)
71 3nks_A Protoporphyrinogen oxid 96.2 0.12 3.9E-06 51.0 15.7 56 96-173 235-291 (477)
72 2gv8_A Monooxygenase; FMO, FAD 96.0 0.0088 3E-07 58.8 6.4 63 91-174 111-179 (447)
73 3k7m_X 6-hydroxy-L-nicotine ox 96.0 0.15 5.1E-06 49.4 15.2 50 101-171 209-258 (431)
74 3gwf_A Cyclohexanone monooxyge 95.9 0.016 5.5E-07 58.3 8.2 65 91-174 83-149 (540)
75 2q0l_A TRXR, thioredoxin reduc 95.7 0.019 6.5E-07 53.0 7.0 63 91-175 55-117 (311)
76 1w4x_A Phenylacetone monooxyge 95.5 0.026 9E-07 56.9 8.0 66 92-175 91-157 (542)
77 1s3e_A Amine oxidase [flavin-c 95.5 0.35 1.2E-05 48.2 16.1 53 97-173 217-269 (520)
78 2v3a_A Rubredoxin reductase; a 95.5 0.026 8.8E-07 54.1 7.4 66 95-181 187-254 (384)
79 1vdc_A NTR, NADPH dependent th 95.4 0.019 6.5E-07 53.6 5.9 61 91-174 66-126 (333)
80 2ivd_A PPO, PPOX, protoporphyr 95.3 0.19 6.5E-06 49.4 13.1 54 96-173 239-295 (478)
81 2yqu_A 2-oxoglutarate dehydrog 95.2 0.038 1.3E-06 54.3 7.6 59 95-174 208-266 (455)
82 1pj5_A N,N-dimethylglycine oxi 95.0 0.034 1.1E-06 59.2 7.1 70 90-181 146-217 (830)
83 4ap3_A Steroid monooxygenase; 94.9 0.043 1.5E-06 55.3 7.3 64 91-173 95-160 (549)
84 1kf6_A Fumarate reductase flav 94.9 0.044 1.5E-06 55.9 7.3 64 95-178 134-203 (602)
85 1fl2_A Alkyl hydroperoxide red 94.8 0.06 2.1E-06 49.5 7.4 65 92-174 53-117 (310)
86 1d4d_A Flavocytochrome C fumar 94.5 0.071 2.4E-06 54.0 7.6 65 93-177 253-322 (572)
87 3uox_A Otemo; baeyer-villiger 94.4 0.056 1.9E-06 54.5 6.6 66 91-175 83-150 (545)
88 1sez_A Protoporphyrinogen oxid 94.4 0.45 1.5E-05 47.1 13.2 35 318-358 461-495 (504)
89 2rgh_A Alpha-glycerophosphate 94.4 0.23 7.9E-06 50.2 11.1 68 92-180 185-259 (571)
90 3o0h_A Glutathione reductase; 94.2 0.067 2.3E-06 53.0 6.5 59 95-174 232-290 (484)
91 1ges_A Glutathione reductase; 94.1 0.068 2.3E-06 52.4 6.5 59 95-174 208-267 (450)
92 2r9z_A Glutathione amide reduc 93.9 0.1 3.5E-06 51.4 7.3 59 95-174 207-266 (463)
93 3fbs_A Oxidoreductase; structu 93.9 0.12 4.2E-06 46.9 7.3 64 91-175 52-115 (297)
94 3lzw_A Ferredoxin--NADP reduct 93.8 0.16 5.3E-06 47.1 8.1 62 92-174 64-125 (332)
95 2xve_A Flavin-containing monoo 93.8 0.058 2E-06 53.2 5.2 66 91-175 97-169 (464)
96 3d1c_A Flavin-containing putat 93.8 0.15 5.1E-06 48.1 8.0 60 92-173 85-144 (369)
97 2vvm_A Monoamine oxidase N; FA 93.7 0.16 5.5E-06 50.2 8.4 59 95-173 255-313 (495)
98 1m6i_A Programmed cell death p 93.6 0.13 4.5E-06 51.0 7.5 66 95-181 226-293 (493)
99 2q7v_A Thioredoxin reductase; 93.5 0.096 3.3E-06 48.6 6.1 61 91-173 61-124 (325)
100 1xdi_A RV3303C-LPDA; reductase 93.5 0.13 4.4E-06 51.2 7.2 58 96-174 224-281 (499)
101 2eq6_A Pyruvate dehydrogenase 93.5 0.11 3.7E-06 51.2 6.6 60 95-175 210-274 (464)
102 3iwa_A FAD-dependent pyridine 93.4 0.12 4.1E-06 50.9 6.7 67 95-182 202-270 (472)
103 3lxd_A FAD-dependent pyridine 93.3 0.17 5.7E-06 49.0 7.5 66 95-181 194-262 (415)
104 3cty_A Thioredoxin reductase; 93.2 0.15 5.1E-06 47.1 6.8 60 91-173 68-127 (319)
105 3fg2_P Putative rubredoxin red 93.2 0.15 5.1E-06 49.1 7.0 67 95-182 184-253 (404)
106 1hyu_A AHPF, alkyl hydroperoxi 93.1 0.17 5.7E-06 50.7 7.3 64 92-173 264-327 (521)
107 1trb_A Thioredoxin reductase; 93.0 0.13 4.5E-06 47.4 6.1 60 92-174 59-118 (320)
108 3ef6_A Toluene 1,2-dioxygenase 92.9 0.12 4.3E-06 49.8 6.0 67 95-182 185-253 (410)
109 1mo9_A ORF3; nucleotide bindin 92.7 0.16 5.4E-06 50.8 6.5 67 95-182 255-329 (523)
110 3itj_A Thioredoxin reductase 1 92.5 0.21 7.2E-06 46.3 6.8 62 91-174 80-144 (338)
111 1fec_A Trypanothione reductase 92.4 0.23 7.7E-06 49.2 7.1 59 95-174 231-290 (490)
112 2a87_A TRXR, TR, thioredoxin r 92.3 0.2 6.8E-06 46.7 6.3 61 91-174 67-128 (335)
113 2wpf_A Trypanothione reductase 92.3 0.25 8.4E-06 49.1 7.2 60 95-174 235-294 (495)
114 3g3e_A D-amino-acid oxidase; F 92.2 0.55 1.9E-05 43.9 9.3 52 89-173 136-187 (351)
115 1b37_A Protein (polyamine oxid 92.1 0.21 7.3E-06 49.1 6.5 57 96-172 207-270 (472)
116 3p1w_A Rabgdi protein; GDI RAB 92.1 0.28 9.6E-06 48.2 7.2 58 95-171 256-313 (475)
117 2hqm_A GR, grase, glutathione 92.0 0.21 7.1E-06 49.3 6.3 59 95-174 226-287 (479)
118 3f8d_A Thioredoxin reductase ( 92.0 0.38 1.3E-05 44.1 7.8 60 92-173 67-126 (323)
119 1onf_A GR, grase, glutathione 91.7 0.39 1.3E-05 47.7 8.0 60 95-174 217-277 (500)
120 3oc4_A Oxidoreductase, pyridin 91.6 0.44 1.5E-05 46.5 8.2 57 95-173 189-245 (452)
121 2qae_A Lipoamide, dihydrolipoy 91.5 0.28 9.4E-06 48.2 6.5 59 95-174 215-278 (468)
122 3s5w_A L-ornithine 5-monooxyge 91.0 0.24 8.4E-06 48.4 5.6 65 91-173 123-193 (463)
123 1ojt_A Surface protein; redox- 90.8 0.25 8.6E-06 48.8 5.5 59 95-174 226-288 (482)
124 1ebd_A E3BD, dihydrolipoamide 90.7 0.25 8.4E-06 48.4 5.3 59 95-174 211-272 (455)
125 4at0_A 3-ketosteroid-delta4-5a 90.0 0.64 2.2E-05 46.2 7.7 59 96-173 203-265 (510)
126 1dxl_A Dihydrolipoamide dehydr 89.8 0.36 1.2E-05 47.4 5.6 59 95-174 218-281 (470)
127 2a8x_A Dihydrolipoyl dehydroge 89.6 0.28 9.7E-06 48.1 4.7 58 95-176 91-150 (464)
128 1zmd_A Dihydrolipoyl dehydroge 89.6 0.51 1.8E-05 46.3 6.6 59 95-174 220-284 (474)
129 2wdq_A Succinate dehydrogenase 89.5 0.94 3.2E-05 45.9 8.6 61 95-174 143-208 (588)
130 1d5t_A Guanine nucleotide diss 89.5 0.24 8.2E-06 48.2 4.0 58 95-173 234-291 (433)
131 2e5v_A L-aspartate oxidase; ar 89.2 0.23 7.8E-06 49.0 3.6 61 94-177 118-181 (472)
132 4dna_A Probable glutathione re 89.1 0.6 2.1E-05 45.7 6.6 58 95-174 211-270 (463)
133 1q1r_A Putidaredoxin reductase 88.8 0.59 2E-05 45.3 6.3 70 95-182 191-262 (431)
134 2h88_A Succinate dehydrogenase 88.7 1.1 3.8E-05 45.6 8.5 60 95-174 155-219 (621)
135 1chu_A Protein (L-aspartate ox 88.6 0.38 1.3E-05 48.2 4.9 69 95-175 138-211 (540)
136 3ntd_A FAD-dependent pyridine 88.4 0.81 2.8E-05 46.0 7.1 85 95-181 192-278 (565)
137 2a8x_A Dihydrolipoyl dehydroge 88.3 0.78 2.7E-05 44.9 6.8 59 95-174 212-273 (464)
138 2cdu_A NADPH oxidase; flavoenz 88.1 1.2 4E-05 43.4 8.0 59 95-174 191-249 (452)
139 3lad_A Dihydrolipoamide dehydr 87.8 1.1 3.6E-05 44.1 7.4 59 95-174 221-282 (476)
140 1zk7_A HGII, reductase, mercur 87.6 0.92 3.1E-05 44.4 6.8 58 95-174 216-273 (467)
141 3urh_A Dihydrolipoyl dehydroge 87.6 0.8 2.8E-05 45.2 6.5 59 95-174 239-302 (491)
142 2bcg_G Secretory pathway GDP d 87.6 0.64 2.2E-05 45.4 5.6 57 95-173 242-301 (453)
143 1rsg_A FMS1 protein; FAD bindi 87.4 1 3.4E-05 44.8 7.0 47 108-173 212-258 (516)
144 1nhp_A NADH peroxidase; oxidor 87.3 0.94 3.2E-05 44.0 6.7 58 95-174 191-248 (447)
145 2gqw_A Ferredoxin reductase; f 87.1 1.2 4E-05 42.9 7.1 63 95-182 187-251 (408)
146 3h8l_A NADH oxidase; membrane 86.8 0.98 3.4E-05 43.3 6.4 53 95-172 218-270 (409)
147 1trb_A Thioredoxin reductase; 86.8 1.5 5.2E-05 40.0 7.5 58 95-173 184-248 (320)
148 1dxl_A Dihydrolipoamide dehydr 85.7 0.68 2.3E-05 45.4 4.7 59 97-179 98-158 (470)
149 3d1c_A Flavin-containing putat 85.0 1.9 6.5E-05 40.3 7.3 55 99-173 218-273 (369)
150 1v59_A Dihydrolipoamide dehydr 84.5 1.1 3.6E-05 44.1 5.5 62 95-175 224-290 (478)
151 3ics_A Coenzyme A-disulfide re 84.5 1.2 4.2E-05 45.0 6.1 64 95-181 228-293 (588)
152 3s5w_A L-ornithine 5-monooxyge 84.3 2.4 8.1E-05 41.3 7.9 44 109-172 329-377 (463)
153 2bc0_A NADH oxidase; flavoprot 84.0 2.2 7.5E-05 42.0 7.5 58 95-174 236-293 (490)
154 4gut_A Lysine-specific histone 84.0 1.7 5.7E-05 45.6 6.9 40 111-170 544-583 (776)
155 3dgh_A TRXR-1, thioredoxin red 83.9 1.7 5.8E-05 42.7 6.6 59 95-173 227-290 (483)
156 4b1b_A TRXR, thioredoxin reduc 83.8 2 6.9E-05 42.9 7.2 59 95-174 263-321 (542)
157 1q1r_A Putidaredoxin reductase 83.8 0.69 2.3E-05 44.9 3.7 47 106-175 71-117 (431)
158 2bs2_A Quinol-fumarate reducta 82.7 2.4 8.3E-05 43.5 7.4 60 95-174 158-222 (660)
159 3ic9_A Dihydrolipoamide dehydr 82.6 2.6 9.1E-05 41.5 7.5 57 95-173 215-275 (492)
160 2zbw_A Thioredoxin reductase; 82.5 2.2 7.6E-05 39.2 6.6 58 95-173 191-253 (335)
161 4gde_A UDP-galactopyranose mut 82.1 1.2 4E-05 44.0 4.7 53 95-170 222-274 (513)
162 2jae_A L-amino acid oxidase; o 81.8 1.7 5.9E-05 42.6 5.8 54 95-171 239-295 (489)
163 1xhc_A NADH oxidase /nitrite r 81.6 1.4 4.7E-05 41.6 4.8 61 95-181 183-245 (367)
164 1vg0_A RAB proteins geranylger 81.4 3 0.0001 42.5 7.3 58 94-169 377-434 (650)
165 1lvl_A Dihydrolipoamide dehydr 81.1 1.5 5E-05 42.9 4.9 57 95-174 212-270 (458)
166 3cgb_A Pyridine nucleotide-dis 81.1 2.5 8.4E-05 41.5 6.6 57 95-173 227-283 (480)
167 3dk9_A Grase, GR, glutathione 80.2 3.2 0.00011 40.6 7.0 58 95-173 228-294 (478)
168 3vrd_B FCCB subunit, flavocyto 79.7 1.2 4E-05 42.5 3.6 56 95-171 198-257 (401)
169 1ojt_A Surface protein; redox- 79.4 1.3 4.6E-05 43.4 4.0 54 97-174 97-162 (482)
170 1y56_A Hypothetical protein PH 79.3 1.6 5.5E-05 43.1 4.6 58 103-181 265-324 (493)
171 1v59_A Dihydrolipoamide dehydr 78.6 2.1 7.1E-05 42.0 5.1 53 96-172 97-157 (478)
172 4g6h_A Rotenone-insensitive NA 78.3 3.2 0.00011 41.1 6.3 56 95-171 272-331 (502)
173 2yg5_A Putrescine oxidase; oxi 77.9 3.2 0.00011 40.1 6.3 50 97-171 217-267 (453)
174 3ab1_A Ferredoxin--NADP reduct 77.8 2.6 9E-05 39.3 5.4 57 96-173 203-264 (360)
175 3itj_A Thioredoxin reductase 1 77.6 2.7 9.2E-05 38.5 5.4 36 318-357 300-335 (338)
176 1jnr_A Adenylylsulfate reducta 77.3 3.3 0.00011 42.3 6.4 62 93-174 149-220 (643)
177 1ebd_A E3BD, dihydrolipoamide 76.3 2.8 9.7E-05 40.7 5.3 55 97-175 93-148 (455)
178 3f8d_A Thioredoxin reductase ( 75.8 4.9 0.00017 36.4 6.6 53 101-173 195-252 (323)
179 3dgz_A Thioredoxin reductase 2 74.6 5.2 0.00018 39.2 6.8 59 95-173 225-288 (488)
180 4eqs_A Coenzyme A disulfide re 73.8 2.9 0.0001 40.4 4.6 53 95-172 188-240 (437)
181 3klj_A NAD(FAD)-dependent dehy 73.2 4.3 0.00015 38.5 5.5 43 106-171 73-115 (385)
182 2q7v_A Thioredoxin reductase; 72.9 7.5 0.00025 35.4 7.1 37 318-358 277-313 (325)
183 2iid_A L-amino-acid oxidase; f 72.7 6 0.0002 38.8 6.7 52 96-171 242-297 (498)
184 4b63_A L-ornithine N5 monooxyg 72.6 5.2 0.00018 39.4 6.2 67 91-170 141-212 (501)
185 2gqw_A Ferredoxin reductase; f 72.5 2.6 8.8E-05 40.4 3.9 47 105-174 69-115 (408)
186 3fbs_A Oxidoreductase; structu 72.1 4.2 0.00014 36.4 5.1 50 97-171 176-225 (297)
187 3hyw_A Sulfide-quinone reducta 71.8 6.7 0.00023 37.7 6.7 53 96-171 201-255 (430)
188 3iwa_A FAD-dependent pyridine 71.4 8.3 0.00028 37.5 7.3 38 317-354 286-328 (472)
189 2b9w_A Putative aminooxidase; 70.8 5.4 0.00018 38.1 5.7 41 111-172 218-258 (424)
190 2z3y_A Lysine-specific histone 70.4 3.9 0.00013 42.0 4.8 37 318-357 623-659 (662)
191 2q0l_A TRXR, thioredoxin reduc 69.9 8.9 0.0003 34.6 6.8 53 100-172 183-241 (311)
192 3h28_A Sulfide-quinone reducta 69.6 6.5 0.00022 37.7 6.0 52 97-171 202-255 (430)
193 3l8k_A Dihydrolipoyl dehydroge 69.0 7.6 0.00026 37.7 6.4 55 96-174 215-274 (466)
194 3r9u_A Thioredoxin reductase; 68.1 8.3 0.00028 34.7 6.2 36 318-357 277-312 (315)
195 3cty_A Thioredoxin reductase; 68.0 7.3 0.00025 35.4 5.8 36 318-357 281-316 (319)
196 1fl2_A Alkyl hydroperoxide red 67.8 9.1 0.00031 34.5 6.4 37 318-358 270-306 (310)
197 3lzw_A Ferredoxin--NADP reduct 67.7 5.5 0.00019 36.3 4.9 39 318-358 278-316 (332)
198 4fk1_A Putative thioredoxin re 67.6 17 0.00058 32.7 8.2 61 92-172 57-117 (304)
199 3cgb_A Pyridine nucleotide-dis 67.2 6 0.0002 38.7 5.2 44 110-173 107-153 (480)
200 1zmd_A Dihydrolipoyl dehydroge 66.9 7 0.00024 38.1 5.7 56 97-176 99-156 (474)
201 3k30_A Histamine dehydrogenase 66.1 8.2 0.00028 39.7 6.3 53 97-172 569-624 (690)
202 3sx6_A Sulfide-quinone reducta 65.8 5.7 0.0002 38.3 4.7 58 95-176 59-116 (437)
203 3kd9_A Coenzyme A disulfide re 65.0 9.5 0.00032 36.8 6.2 65 95-182 190-256 (449)
204 2xag_A Lysine-specific histone 64.7 5.3 0.00018 42.2 4.5 38 318-358 794-831 (852)
205 3r9u_A Thioredoxin reductase; 64.3 19 0.00065 32.2 7.9 57 91-171 58-117 (315)
206 3hyw_A Sulfide-quinone reducta 61.0 5 0.00017 38.6 3.3 40 110-172 70-109 (430)
207 3sx6_A Sulfide-quinone reducta 60.9 12 0.00042 35.8 6.1 57 97-176 210-275 (437)
208 1vdc_A NTR, NADPH dependent th 60.5 16 0.00055 33.2 6.6 38 318-359 288-325 (333)
209 1ps9_A 2,4-dienoyl-COA reducta 60.4 10 0.00036 38.8 5.8 50 99-172 577-628 (671)
210 3fpz_A Thiazole biosynthetic e 58.7 3.5 0.00012 37.9 1.7 40 318-357 284-325 (326)
211 3gyx_A Adenylylsulfate reducta 56.2 8.6 0.00029 39.4 4.2 67 92-174 163-235 (662)
212 2bc0_A NADH oxidase; flavoprot 55.8 7.8 0.00027 38.0 3.7 38 317-354 318-360 (490)
213 3ef6_A Toluene 1,2-dioxygenase 55.4 12 0.0004 35.7 4.8 40 110-171 71-110 (410)
214 3gwf_A Cyclohexanone monooxyge 53.8 15 0.00052 36.5 5.5 42 108-173 342-385 (540)
215 3lxd_A FAD-dependent pyridine 53.3 17 0.00059 34.5 5.7 42 107-171 77-118 (415)
216 1m6i_A Programmed cell death p 52.5 13 0.00044 36.5 4.7 42 110-173 104-145 (493)
217 3g5s_A Methylenetetrahydrofola 52.4 37 0.0013 32.4 7.4 32 90-122 93-124 (443)
218 3qfa_A Thioredoxin reductase 1 50.4 29 0.001 34.1 6.9 62 95-173 250-316 (519)
219 1xhc_A NADH oxidase /nitrite r 50.1 13 0.00046 34.7 4.2 39 110-171 74-112 (367)
220 2a87_A TRXR, TR, thioredoxin r 50.0 16 0.00054 33.4 4.7 36 318-357 281-316 (335)
221 3h8l_A NADH oxidase; membrane 49.9 14 0.00047 35.0 4.3 39 317-358 299-337 (409)
222 3h28_A Sulfide-quinone reducta 49.3 10 0.00035 36.3 3.3 43 317-359 286-335 (430)
223 2qae_A Lipoamide, dihydrolipoy 48.2 25 0.00084 34.0 5.9 53 97-173 95-149 (468)
224 3l8k_A Dihydrolipoyl dehydroge 46.8 38 0.0013 32.7 7.0 49 99-171 93-143 (466)
225 2cdu_A NADPH oxidase; flavoenz 46.6 12 0.00042 36.0 3.4 38 317-354 274-316 (452)
226 1hyu_A AHPF, alkyl hydroperoxi 46.3 30 0.001 34.0 6.3 53 99-171 394-452 (521)
227 3uox_A Otemo; baeyer-villiger 45.2 7 0.00024 39.0 1.4 55 92-172 335-391 (545)
228 2x8g_A Thioredoxin glutathione 44.6 48 0.0017 33.1 7.6 68 95-174 326-397 (598)
229 1nhp_A NADH peroxidase; oxidor 44.3 28 0.00097 33.3 5.6 45 108-173 69-116 (447)
230 1lqt_A FPRA; NADP+ derivative, 42.9 20 0.00068 34.7 4.2 36 318-357 352-387 (456)
231 2yqu_A 2-oxoglutarate dehydrog 42.6 16 0.00054 35.2 3.5 50 100-174 94-143 (455)
232 2hqm_A GR, grase, glutathione 41.5 36 0.0012 33.0 5.9 52 97-172 107-160 (479)
233 3oc4_A Oxidoreductase, pyridin 39.1 28 0.00097 33.4 4.7 46 106-172 69-115 (452)
234 4dsg_A UDP-galactopyranose mut 38.5 39 0.0013 32.8 5.6 56 95-175 216-273 (484)
235 3kd9_A Coenzyme A disulfide re 38.4 23 0.00079 34.0 3.9 40 110-171 73-113 (449)
236 1cjc_A Protein (adrenodoxin re 37.9 31 0.0011 33.3 4.8 36 318-358 360-396 (460)
237 1xdi_A RV3303C-LPDA; reductase 37.8 56 0.0019 31.8 6.7 59 97-173 97-157 (499)
238 1n4w_A CHOD, cholesterol oxida 36.5 40 0.0014 33.0 5.4 55 100-171 226-287 (504)
239 3vrd_B FCCB subunit, flavocyto 35.7 42 0.0014 31.4 5.3 41 111-174 70-110 (401)
240 1kdg_A CDH, cellobiose dehydro 34.7 58 0.002 32.1 6.3 57 97-172 197-261 (546)
241 1o94_A Tmadh, trimethylamine d 34.2 57 0.002 33.6 6.3 25 99-124 575-599 (729)
242 4ap3_A Steroid monooxygenase; 33.0 49 0.0017 32.8 5.4 40 109-173 356-397 (549)
243 3ayj_A Pro-enzyme of L-phenyla 32.7 25 0.00087 36.2 3.2 39 317-359 644-682 (721)
244 2eq6_A Pyruvate dehydrogenase 32.6 42 0.0014 32.3 4.8 33 317-354 301-333 (464)
245 1coy_A Cholesterol oxidase; ox 32.4 52 0.0018 32.2 5.4 55 99-171 230-292 (507)
246 2v3a_A Rubredoxin reductase; a 32.1 30 0.001 32.4 3.5 44 106-173 71-114 (384)
247 3nk4_C ZONA pellucida 3; ferti 31.9 24 0.00082 18.7 1.5 12 155-166 6-17 (30)
248 4a5l_A Thioredoxin reductase; 31.6 1.5E+02 0.0053 26.0 8.3 59 92-172 63-121 (314)
249 3fg2_P Putative rubredoxin red 31.4 56 0.0019 30.7 5.3 39 110-171 71-109 (404)
250 3ics_A Coenzyme A-disulfide re 28.8 87 0.003 31.1 6.5 44 107-171 105-151 (588)
251 2gag_A Heterotetrameric sarcos 25.2 59 0.002 34.8 4.7 51 102-173 323-384 (965)
252 3lxy_A 4-hydroxythreonine-4-ph 24.6 69 0.0024 29.4 4.3 38 317-359 204-241 (334)
253 1w4x_A Phenylacetone monooxyge 24.3 93 0.0032 30.6 5.6 22 151-173 371-392 (542)
254 3qvp_A Glucose oxidase; oxidor 24.2 84 0.0029 31.4 5.3 55 104-173 235-295 (583)
255 2ivd_A PPO, PPOX, protoporphyr 23.4 91 0.0031 29.8 5.3 34 318-357 441-474 (478)
256 2l2d_A OTU domain-containing p 23.0 51 0.0018 21.8 2.2 21 359-379 41-61 (73)
257 1y56_A Hypothetical protein PH 22.8 98 0.0033 30.0 5.4 58 93-172 159-219 (493)
258 2jbv_A Choline oxidase; alcoho 22.0 93 0.0032 30.7 5.1 57 98-172 211-274 (546)
259 1sez_A Protoporphyrinogen oxid 21.9 62 0.0021 31.3 3.8 44 111-174 256-310 (504)
260 1zk7_A HGII, reductase, mercur 21.6 96 0.0033 29.7 5.1 46 104-172 103-150 (467)
261 2xve_A Flavin-containing monoo 21.2 85 0.0029 30.2 4.5 23 150-172 254-276 (464)
262 3ntd_A FAD-dependent pyridine 20.3 1E+02 0.0035 30.3 5.0 38 317-354 295-337 (565)
No 1
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=5e-40 Score=331.97 Aligned_cols=347 Identities=18% Similarity=0.212 Sum_probs=267.7
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+||||.+.+ ...++++.|+++++++|+++|+++++.+. . +.... .+ .+. .++....
T Consensus 33 ~~G~~v~vlE~~~~~----------~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~-~~~~~-~~--~~~---~~~~~~~ 94 (499)
T 2qa2_A 33 LGGVDVMVLEQLPQR----------TGESRGLGFTARTMEVFDQRGILPAFGPV-E-TSTQG-HF--GGR---PVDFGVL 94 (499)
T ss_dssp HTTCCEEEEESCSSC----------CCCCCSEEECHHHHHHHHHTTCGGGGCSC-C-EESEE-EE--TTE---EEEGGGS
T ss_pred HCCCCEEEEECCCCC----------CCCCceeEECHHHHHHHHHCCCHHHHHhc-c-ccccc-ee--cce---ecccccC
Confidence 369999999999887 34567999999999999999999998775 2 22222 12 111 2333222
Q ss_pred C-CccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc---EE
Q 013625 84 N-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT---SL 159 (439)
Q Consensus 84 ~-~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~---~~ 159 (439)
. ..++++.++|..|+++|.+.+.+.+ ++|+++++|++++. ++++++|++++|+ ++
T Consensus 95 ~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~--------------------~~~~v~v~~~~~~g~~~~ 153 (499)
T 2qa2_A 95 EGAHYGVKAVPQSTTESVLEEWALGRG-AELLRGHTVRALTD--------------------EGDHVVVEVEGPDGPRSL 153 (499)
T ss_dssp TTCCCEEEEEEHHHHHHHHHHHHHHTT-CEEEESCEEEEEEE--------------------CSSCEEEEEECSSCEEEE
T ss_pred CCCCCceEecCHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------------eCCEEEEEEEcCCCcEEE
Confidence 2 2345688999999999999999986 99999999999987 4467889998876 89
Q ss_pred EecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeecCCceeEEEEecCCceEEeecCCCceEEEEEcCccC-hhH
Q 013625 160 YAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKD-ASD 238 (439)
Q Consensus 160 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~-~~~ 238 (439)
+||+||||||.+|.||+.+|+......+...++.+.+............+.++++++++|++++..++++...... ...
T Consensus 154 ~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~ 233 (499)
T 2qa2_A 154 TTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRR 233 (499)
T ss_dssp EEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCCCCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCC
T ss_pred EeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECCCCcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccc
Confidence 9999999999999999999988777667677788877765433333445678889999999988877777653321 111
Q ss_pred hhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccccccccccC
Q 013625 239 CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSK 318 (439)
Q Consensus 239 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (439)
....+.+++.+.+...+..... +.+ ..+...|++..+.+++|.+|
T Consensus 234 ~~~~~~~~~~~~l~~~~~~~~~----------------------------------~~~-~~~~~~~~~~~~~a~~~~~g 278 (499)
T 2qa2_A 234 TGPPPYQEVAAAWQRLTGQDIS----------------------------------HGE-PVWVSAFGDPARQVSAYRRG 278 (499)
T ss_dssp SSSCCHHHHHHHHHHHHSCCCT----------------------------------TCE-EEEEEEECCCEEECSCSEET
T ss_pred cCCCCHHHHHHHHHHHhCCCCC----------------------------------ccc-eeEEEEEeCCcEEcccccCC
Confidence 2235667777777764431000 000 11223466666778999999
Q ss_pred CEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcCCCC
Q 013625 319 RVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVDFG 398 (439)
Q Consensus 319 rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~~~~~~ 398 (439)
||+|+|||||.|+|++|||+|+||+||..|+++|...++.. + ...+|+.|+++|+++...++..++.+..++.. ++
T Consensus 279 rv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~-~--~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~-~~ 354 (499)
T 2qa2_A 279 RVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGR-A--PAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS-GD 354 (499)
T ss_dssp TEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTS-S--CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CG
T ss_pred CEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCC-C--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence 99999999999999999999999999999999999987633 2 36899999999999999999999999998874 67
Q ss_pred hHHHHHHHHHHhhccChhHHHHHHHHHhcCC
Q 013625 399 PLNILRAAAFHGAQYISPLKRNIISYASGEQ 429 (439)
Q Consensus 399 ~~~~~r~~~~~~~~~~~~l~~~~~~~~~g~~ 429 (439)
....+|+.++.++ ..|.+++.+...++|..
T Consensus 355 ~~~~~R~~~~~~~-~~~~~~~~~~~~~~~~~ 384 (499)
T 2qa2_A 355 EMQPLRDVLSELI-RYDEVSRHLAGMVSGLD 384 (499)
T ss_dssp GGHHHHHHHHHHH-TSSHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHhh-cCHHHHHHHHHHHhCCC
Confidence 7788999888777 67899999998888765
No 2
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=1.1e-39 Score=329.66 Aligned_cols=347 Identities=17% Similarity=0.188 Sum_probs=266.7
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+||||.+.+ ...++++.|+++++++|+++|+++++.+. . ..... .+. +. .++....
T Consensus 32 ~~G~~v~vlE~~~~~----------~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~-~~~~~-~~~--~~---~~~~~~~ 93 (500)
T 2qa1_A 32 LAGVEVVVLERLVER----------TGESRGLGFTARTMEVFDQRGILPRFGEV-E-TSTQG-HFG--GL---PIDFGVL 93 (500)
T ss_dssp HTTCCEEEEESCCC-----------CCCCCSEEECHHHHHHHHTTTCGGGGCSC-C-BCCEE-EET--TE---EEEGGGS
T ss_pred HCCCCEEEEeCCCCC----------CCCCCcceECHHHHHHHHHCCCHHHHHhc-c-ccccc-ccc--ce---ecccccC
Confidence 469999999999887 34567999999999999999999998775 2 33322 121 11 2333222
Q ss_pred C-CccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc---EE
Q 013625 84 N-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT---SL 159 (439)
Q Consensus 84 ~-~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~---~~ 159 (439)
. ..++++.++|..|+++|.+.+.+.+ ++|+++++|++++. ++++++|++++++ ++
T Consensus 94 ~~~~~~~~~i~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~--------------------~~~~v~v~~~~~~g~~~~ 152 (500)
T 2qa1_A 94 EGAWQAAKTVPQSVTETHLEQWATGLG-ADIRRGHEVLSLTD--------------------DGAGVTVEVRGPEGKHTL 152 (500)
T ss_dssp TTGGGCEEEEEHHHHHHHHHHHHHHTT-CEEEETCEEEEEEE--------------------ETTEEEEEEEETTEEEEE
T ss_pred CCCCCceeecCHHHHHHHHHHHHHHCC-CEEECCcEEEEEEE--------------------cCCeEEEEEEcCCCCEEE
Confidence 2 2345688999999999999999987 99999999999987 4567889988876 89
Q ss_pred EecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeecCCceeEEEEecCCceEEeecCCCceEEEEEcCccC-hhH
Q 013625 160 YAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKD-ASD 238 (439)
Q Consensus 160 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~-~~~ 238 (439)
+||+||||||.+|.||+.+|+......+...++.+.+............+.++++++++|++++..++++...... ...
T Consensus 153 ~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~ 232 (500)
T 2qa1_A 153 RAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRR 232 (500)
T ss_dssp EESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCCCCCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC---
T ss_pred EeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCCCCCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccc
Confidence 9999999999999999999988777677777788877765433333445678889999999988777777653322 122
Q ss_pred hhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccccccccccC
Q 013625 239 CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSK 318 (439)
Q Consensus 239 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (439)
....+.+++.+.+...+..... +.+ ..+...|++..+.+++|.+|
T Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~----------------------------------~~~-~~~~~~~~~~~~~a~~~~~g 277 (500)
T 2qa1_A 233 ETPPSWHEVADAWKRLTGDDIA----------------------------------HAE-PVWVSAFGNATRQVTEYRRG 277 (500)
T ss_dssp --CCCHHHHHHHHHHHHSCCCT----------------------------------TSE-EEEEEEEECCEEECSCSEET
T ss_pred cCCCCHHHHHHHHHHhcCCCCC----------------------------------ccc-eeEEEEeccCcEEccccccC
Confidence 2345677777777764431000 000 11223467777778999999
Q ss_pred CEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcCCCC
Q 013625 319 RVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVDFG 398 (439)
Q Consensus 319 rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~~~~~~ 398 (439)
||+|+|||||.|+|++|||+|+||+||..|+++|...++.. ..+.+|+.|+++|+++...++..++.+..++.. .+
T Consensus 278 rv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~---~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~-~~ 353 (500)
T 2qa1_A 278 RVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGT---ATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS-GP 353 (500)
T ss_dssp TEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTS---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CG
T ss_pred CEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCC---CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence 99999999999999999999999999999999999987632 237899999999999999999999999998874 67
Q ss_pred hHHHHHHHHHHhhccChhHHHHHHHHHhcCC
Q 013625 399 PLNILRAAAFHGAQYISPLKRNIISYASGEQ 429 (439)
Q Consensus 399 ~~~~~r~~~~~~~~~~~~l~~~~~~~~~g~~ 429 (439)
....+|+.++.++ ..|.+++.+...++|..
T Consensus 354 ~~~~~R~~~~~~~-~~~~~~~~~~~~~~g~~ 383 (500)
T 2qa1_A 354 EVQPLRDVLTELI-QYGEVARHLAGMVSGLE 383 (500)
T ss_dssp GGHHHHHHHHHHH-TSHHHHHHHHHHHHSTT
T ss_pred hHHHHHHHHHHhh-cCHHHHHHHhhhhccCC
Confidence 7788999888777 68999999999888865
No 3
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=1.8e-40 Score=339.53 Aligned_cols=352 Identities=18% Similarity=0.199 Sum_probs=267.8
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+||||.+.+ ...++++.|+++++++|+++|+++++.+.+...... .+. +.....++....
T Consensus 70 ~~G~~V~VlEr~~~~----------~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~--~~~--~~~~~~~~~~~~ 135 (570)
T 3fmw_A 70 AGGVGALVLEKLVEP----------VGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGL--PFA--GIFTQGLDFGLV 135 (570)
T ss_dssp HTTCCEEEEBSCSSC----------CCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBC--CBT--TBCTTCCBGGGS
T ss_pred HCCCCEEEEcCCCCC----------CCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCc--eeC--Cccccccccccc
Confidence 369999999999987 455679999999999999999999998876633211 111 111112222222
Q ss_pred C-CccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe--CCC-cEE
Q 013625 84 N-KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL--SDG-TSL 159 (439)
Q Consensus 84 ~-~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~dg-~~~ 159 (439)
. ..++++.++|..|++.|.+.+.+.+ ++|+++++|++++. ++++++|++ .+| +++
T Consensus 136 ~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~i~~~~~v~~l~~--------------------~~~~v~v~~~~~~G~~~~ 194 (570)
T 3fmw_A 136 DTRHPYTGLVPQSRTEALLAEHAREAG-AEIPRGHEVTRLRQ--------------------DAEAVEVTVAGPSGPYPV 194 (570)
T ss_dssp CCSCCSBBCCCHHHHHHHHHHHHHHHT-EECCBSCEEEECCB--------------------CSSCEEEEEEETTEEEEE
T ss_pred CCCCCeeEEeCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------------cCCeEEEEEEeCCCcEEE
Confidence 2 2345678999999999999999886 99999999999987 446677877 788 799
Q ss_pred EecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeecCCceeEE-EEecCCceEE-eecCCCce-EEEEEcCccCh
Q 013625 160 YAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQ-RFLPAGPIAL-LPIGDNFS-NIVWTMNPKDA 236 (439)
Q Consensus 160 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~-~p~~~~~~-~~~~~~~~~~~ 236 (439)
+||+||+|||.+|.||+.+|+......+...++.+.+....+. ..+. .+.+.|++++ +|++++.. +++|.......
T Consensus 195 ~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~ 273 (570)
T 3fmw_A 195 RARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE-VPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSP 273 (570)
T ss_dssp EESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS-SCCCCCCCCSSCEEECCCC------CEEEEEESCC-
T ss_pred EeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC-cceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCc
Confidence 9999999999999999999998888888888888877665444 1222 3457778877 79988877 77777653332
Q ss_pred -hHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeeccccccccc
Q 013625 237 -SDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNY 315 (439)
Q Consensus 237 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (439)
......+.+++.+.+...+. .. ++ ......+...|++..+.+++|
T Consensus 274 ~~~~~~~~~~~~~~~l~~~~~----~~---------------~~---------------~~~~~~~~~~~~~~~~~a~~~ 319 (570)
T 3fmw_A 274 AADEGPVTLEDLGAAVARVRG----TP---------------LT---------------LTEPVSWLSRFGDASRQAKRY 319 (570)
T ss_dssp ----CCCCHHHHHHHTTSSSS----CC---------------CC---------------CCSCCEEEEEECCCCEECSCS
T ss_pred cccccCCCHHHHHHHHHHHhh----cc---------------cc---------------cceeeeeeEEeeccccccccc
Confidence 22234566666665544221 00 00 011112344688888889999
Q ss_pred ccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcC
Q 013625 316 VSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSV 395 (439)
Q Consensus 316 ~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~~~ 395 (439)
..|||+|+|||||.++|++|||+|+||+||..|+++|...++.. ....+|+.|+++|+++...++..++.+..+++.
T Consensus 320 ~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~---~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~ 396 (570)
T 3fmw_A 320 RSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGW---GSEELLDTYHDERHPVAERVLLNTRAQLALMRP 396 (570)
T ss_dssp EETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred ccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999988643 248899999999999999999999999999988
Q ss_pred CCChHHHHHHHHHHhhccChhHHHHHHHHHhcCC
Q 013625 396 DFGPLNILRAAAFHGAQYISPLKRNIISYASGEQ 429 (439)
Q Consensus 396 ~~~~~~~~r~~~~~~~~~~~~l~~~~~~~~~g~~ 429 (439)
..++...+|+.++.++ ..|.+++.+++.++|..
T Consensus 397 ~~~~~~~lR~~~~~l~-~~~~~~~~~~~~~~g~~ 429 (570)
T 3fmw_A 397 DEQHTTPLRGFVEELL-GTDEVNRYFTGMITGTD 429 (570)
T ss_dssp CTTTHHHHHHHHHHHT-TSHHHHHHHHHHHHSTT
T ss_pred CchHHHHHHHHHHHHh-cCHHHHHHHHHHHhCCC
Confidence 6665899999999999 79999999999999987
No 4
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.9e-40 Score=327.01 Aligned_cols=345 Identities=18% Similarity=0.192 Sum_probs=252.7
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+||||++.++ ..++++.++++++++|+++|+++++...+. +...+.+++.++.....++....
T Consensus 27 ~~G~~V~viE~~~~~~----------~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 95 (399)
T 2x3n_A 27 RQGHRVVVVEQARRER----------AINGADLLKPAGIRVVEAAGLLAEVTRRGG-RVRHELEVYHDGELLRYFNYSSV 95 (399)
T ss_dssp HTTCCEEEECSSCCC-------------CCCCEECHHHHHHHHHTTCHHHHHHTTC-EEECEEEEEETTEEEEEEETTSS
T ss_pred hCCCcEEEEeCCCCCC----------ccCceeeECchHHHHHHHcCcHHHHHHhCC-CcceeEEEeCCCCEEEecchHHh
Confidence 3699999999998763 345699999999999999999999887665 56677788877765666665443
Q ss_pred CCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCcee--EEEeCCCcEEEe
Q 013625 84 NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA--KLDLSDGTSLYA 161 (439)
Q Consensus 84 ~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v--~v~~~dg~~~~a 161 (439)
..+.+++.++|..|.+.|.+.+.+.++++|+++++|++++. +++++ .|+++||++++|
T Consensus 96 ~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~--------------------~~~~v~g~v~~~~g~~~~a 155 (399)
T 2x3n_A 96 DARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQR--------------------DERHAIDQVRLNDGRVLRP 155 (399)
T ss_dssp CGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEE--------------------CTTSCEEEEEETTSCEEEE
T ss_pred cccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEE--------------------cCCceEEEEEECCCCEEEC
Confidence 34566789999999999999999884499999999999987 44567 899999999999
Q ss_pred cEEEEecCCCchhhhhhCCCCCCC--cCCC--eEEEEEEEeecCCceeEEEEec-CCceEEeecCCCceEEEEEc--Ccc
Q 013625 162 KLVVGADGGKSRVRELAGFKTTGW--SYSQ--NAIICTVEHNKENYCAWQRFLP-AGPIALLPIGDNFSNIVWTM--NPK 234 (439)
Q Consensus 162 dlvVgADG~~S~vR~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~--~~~ 234 (439)
|+||+|||.+|.||+.++...... .++. .++.+.++.+.+.. . .++.+ +++++++|++++. +.|.+ +..
T Consensus 156 d~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~ 231 (399)
T 2x3n_A 156 RVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERN-R-LYVDSQGGLAYFYPIGFDR--ARLVVSFPRE 231 (399)
T ss_dssp EEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHCE-E-EEECTTSCEEEEEEETTTE--EEEEEECCHH
T ss_pred CEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCCc-c-EEEcCCCcEEEEEEcCCCE--EEEEEEeCcc
Confidence 999999999999999998776555 5666 66666665432223 3 66678 8999999998744 44544 333
Q ss_pred ChhHhh-CCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecc--cceeeeccc-c
Q 013625 235 DASDCK-SMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLAS--ERMVFPLSL-K 310 (439)
Q Consensus 235 ~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~ 310 (439)
...... ..+.+.+.+.+. .|.+... ... + +... ....||+.. .
T Consensus 232 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~---------~~~------------------~-~~~~~~~~~~~~~~~~~ 278 (399)
T 2x3n_A 232 EARELMADTRGESLRRRLQ-----RFVGDES---------AEA------------------I-AAVTGTSRFKGIPIGYL 278 (399)
T ss_dssp HHHHHHHSTTSHHHHHHHH-----TTCCGGG---------HHH------------------H-HTCCCSTTCEECCCCCE
T ss_pred ccccccccCCHHHHHHHHh-----hcCCcch---------hhH------------------H-hcCCccceEEechhhcc
Confidence 222211 134445554443 2221100 000 0 1111 334577777 5
Q ss_pred cccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013625 311 HANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQ 390 (439)
Q Consensus 311 ~~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~ 390 (439)
..++|..|||+|+|||||.|+|++|||+|+||+||..|+++|...++.+.++ ..+|+.|+++|++++..++..++.+.
T Consensus 279 ~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~--~~~l~~Y~~~r~~~~~~~~~~s~~~~ 356 (399)
T 2x3n_A 279 NLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACAL--EDALAGYQAERFPVNQAIVSYGHALA 356 (399)
T ss_dssp ECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchH--HHHHHHHHHHhccHHHHHHHHHHHhh
Confidence 6789999999999999999999999999999999999999999987644443 78999999999999999999999999
Q ss_pred HhhcCCCChHHHHHHHHHHhhccChhHHH
Q 013625 391 KAYSVDFGPLNILRAAAFHGAQYISPLKR 419 (439)
Q Consensus 391 ~~~~~~~~~~~~~r~~~~~~~~~~~~l~~ 419 (439)
++++..+++..++ +..++.+...|.+..
T Consensus 357 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 384 (399)
T 2x3n_A 357 TSLEDRQRFAGVF-DTALQGSSRTPEALG 384 (399)
T ss_dssp HHTTCHHHHHHHH-HC-------------
T ss_pred hhhcccCchHHHH-HHHHhhhcCCCcccC
Confidence 9999888888888 999998887775443
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=2.7e-39 Score=319.59 Aligned_cols=350 Identities=16% Similarity=0.175 Sum_probs=261.0
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCC-CcceeEEeccC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYT-GLGYTKYNARD 82 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 82 (439)
.+|++|+||||.+.+. ..++++.|+|+++++|+++|+++++.+.+. +...+.+++.. +.....++...
T Consensus 44 ~~G~~V~v~E~~~~~~----------~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 112 (407)
T 3rp8_A 44 QSGIDCDVYEAVKEIK----------PVGAAISVWPNGVKCMAHLGMGDIMETFGG-PLRRMAYRDFRSGENMTQFSLAP 112 (407)
T ss_dssp HTTCEEEEEESSSCC--------------CEEEECHHHHHHHHHTTCHHHHHHHSC-CCCEEEEEETTTCCEEEEEECHH
T ss_pred hCCCCEEEEeCCCCCC----------CcCeeEEECHHHHHHHHHCCCHHHHHhhcC-CCcceEEEECCCCCEeEEecchh
Confidence 4699999999998873 345699999999999999999999998877 67888899887 66666665322
Q ss_pred CC--CccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEE
Q 013625 83 VN--KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLY 160 (439)
Q Consensus 83 ~~--~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~ 160 (439)
.. ....++.++|..|++.|.+.+.+ ++|+++++|++++. ++++++|++.||+++.
T Consensus 113 ~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~--------------------~~~~v~v~~~~g~~~~ 169 (407)
T 3rp8_A 113 LIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEE--------------------DADGVTVWFTDGSSAS 169 (407)
T ss_dssp HHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEE--------------------ETTEEEEEETTSCEEE
T ss_pred hhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEe--------------------cCCcEEEEEcCCCEEe
Confidence 11 12456889999999999999975 79999999999987 5578999999999999
Q ss_pred ecEEEEecCCCchhhhhh-CCCCCCCcCCCeEEEEEEEeecC--C-ceeEEEEecCCceEEeecCCCceEEEEEcCccCh
Q 013625 161 AKLVVGADGGKSRVRELA-GFKTTGWSYSQNAIICTVEHNKE--N-YCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDA 236 (439)
Q Consensus 161 adlvVgADG~~S~vR~~l-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~ 236 (439)
||+||+|||.+|.||+.+ +........+...+.+.++.+.. . ......+.++++++++|++++...+++.......
T Consensus 170 a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 249 (407)
T 3rp8_A 170 GDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAG 249 (407)
T ss_dssp ESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT
T ss_pred eCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcC
Confidence 999999999999999999 66545545555666666654422 2 3333444688899999999988777776643321
Q ss_pred hHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccccccccc
Q 013625 237 SDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYV 316 (439)
Q Consensus 237 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (439)
...+.+.+.+.+.+.+. +|.+. +..++..... ... .....+++.. ..+|.
T Consensus 250 ---~~~~~~~~~~~l~~~~~-~~~~~-----------~~~~~~~~~~---------~~~----~~~~~~~~~~--~~~~~ 299 (407)
T 3rp8_A 250 ---LAEDRDTLRADLSRYFA-GWAPP-----------VQKLIAALDP---------QTT----NRIEIHDIEP--FSRLV 299 (407)
T ss_dssp ---CSCCTTTHHHHHHHHTT-TCCHH-----------HHHHHHHSCG---------GGC----EEEEEEECCC--CSCCE
T ss_pred ---CCCCchhHHHHHHHHhc-CCChH-----------HHHHHHcCCc---------cce----eEEeeEecCC--CCcee
Confidence 12344556666666554 23221 1111110000 000 0011233322 38899
Q ss_pred cCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcCC
Q 013625 317 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 396 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~~~~ 396 (439)
.+||+|||||||.++|++|||+|+||+||..|+++|... + ....+|+.|+++|++++..++..++.+..+++..
T Consensus 300 ~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~---~---~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 373 (407)
T 3rp8_A 300 RGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT---R---DIAAALREYEAQRCDRVRDLVLKARKRCDITHGK 373 (407)
T ss_dssp ETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---C---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---C---CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC
Confidence 999999999999999999999999999999999999853 2 3488999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhccChhHHHHHHHH
Q 013625 397 FGPLNILRAAAFHGAQYISPLKRNIISY 424 (439)
Q Consensus 397 ~~~~~~~r~~~~~~~~~~~~l~~~~~~~ 424 (439)
++...+.|+..++... .+.+.+.+...
T Consensus 374 ~~~~~~~R~~~l~~~~-~~~~~~~~~~~ 400 (407)
T 3rp8_A 374 DMQLTEAWYQELREET-GERIINGMCDT 400 (407)
T ss_dssp THHHHHHHHHHHHSCC-SHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcc-HHHHHHhhhhh
Confidence 9999999999998775 34454554443
No 6
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=2.8e-38 Score=312.26 Aligned_cols=341 Identities=14% Similarity=0.139 Sum_probs=216.6
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhc---CccceEEEEeCCCcceeEEe-
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRH---AYFDKMQVWDYTGLGYTKYN- 79 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~- 79 (439)
.+|++|+||||.+.+.. ...+.++.|+|+++++|+++|+.+.+..... .......+++..+.......
T Consensus 22 ~~G~~v~v~Er~~~~~~--------~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (412)
T 4hb9_A 22 KHGIKVTIYERNSAASS--------ILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYNERMRLLAVHGG 93 (412)
T ss_dssp HTTCEEEEECSSCSSCS--------SCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEECTTSCEEEC---
T ss_pred hCCCCEEEEecCCCCCc--------CCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEecCCcceecccCC
Confidence 46999999999998732 1234588999999999999999887654321 11223334444433221111
Q ss_pred ccC---CCCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC
Q 013625 80 ARD---VNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG 156 (439)
Q Consensus 80 ~~~---~~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg 156 (439)
... .......+.++|..|+++|.+.+ + .+|+++++|++++. .+++.++|+++||
T Consensus 94 ~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~-~~v~~~~~v~~~~~-------------------~~~~~v~v~~~dG 150 (412)
T 4hb9_A 94 ISPMAGKIISEQRLSISRTELKEILNKGL---A-NTIQWNKTFVRYEH-------------------IENGGIKIFFADG 150 (412)
T ss_dssp -----------CEEEEEHHHHHHHHHTTC---T-TTEECSCCEEEEEE-------------------CTTSCEEEEETTS
T ss_pred ccccccccccccceEeeHHHHHHHHHhhc---c-ceEEEEEEEEeeeE-------------------cCCCeEEEEECCC
Confidence 000 01122336799999999998876 3 57999999999986 1336799999999
Q ss_pred cEEEecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeecCC---------ceeEEEEe--------------cCC
Q 013625 157 TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN---------YCAWQRFL--------------PAG 213 (439)
Q Consensus 157 ~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~--------------~~g 213 (439)
++++||+||||||++|.||+.+++......++...+.+.+...... ......+. +.+
T Consensus 151 ~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (412)
T 4hb9_A 151 SHENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVN 230 (412)
T ss_dssp CEEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESC
T ss_pred CEEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCc
Confidence 9999999999999999999999888777777777777766544211 00011111 111
Q ss_pred ceEEeecCCCceEEEEEcC---ccChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCcccccccccc
Q 013625 214 PIALLPIGDNFSNIVWTMN---PKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFE 290 (439)
Q Consensus 214 ~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (439)
....++.......+.|... ..........+.+...+.+...+. +|.+. +..+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~-----------~~~li~~---------- 288 (412)
T 4hb9_A 231 IHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMI-SWDPS-----------LHTLVQQ---------- 288 (412)
T ss_dssp TTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTT-TSCHH-----------HHHHHHT----------
T ss_pred eeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhc-cCChH-----------HHHHHHh----------
Confidence 1112222222222333321 122223344566777777777654 44332 1111111
Q ss_pred CCcceeeecccceeee--ccc-ccccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHH
Q 013625 291 VPPRVVKLASERMVFP--LSL-KHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASL 367 (439)
Q Consensus 291 ~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~ 367 (439)
......++ +.. ....+|.+|||+|+|||||.|+|++|||+|+||+||..|+++|.......+++ ..+
T Consensus 289 --------~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~--~~a 358 (412)
T 4hb9_A 289 --------SDMENISPLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEEL--VKA 358 (412)
T ss_dssp --------SCTTCCEEEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCH--HHH
T ss_pred --------cccceeccchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCH--HHH
Confidence 11111222 222 23578999999999999999999999999999999999999999988766544 789
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHH--hhcCCCChHHHHHHHHH
Q 013625 368 LKKYEAERKPANIVMMAVLDGFQK--AYSVDFGPLNILRAAAF 408 (439)
Q Consensus 368 l~~Ye~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~ 408 (439)
|+.||++|++++.+++..++.... +++...+.. ..|+..+
T Consensus 359 L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~r~~~~ 400 (412)
T 4hb9_A 359 ISDYEQQMRAYANEIVGISLRSAQNAVIHFSIPPL-KQRHLSI 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchH-HHHHHHH
Confidence 999999999999999999887664 334444432 3344444
No 7
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=4.4e-37 Score=320.03 Aligned_cols=332 Identities=19% Similarity=0.257 Sum_probs=239.1
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCccee----EEec
Q 013625 5 KHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYT----KYNA 80 (439)
Q Consensus 5 ~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~ 80 (439)
.|++|+||||++.+ ...+++++|+++++++|+++|+++++.+.+. ++..+.+|+.+....+ .++.
T Consensus 35 ~Gi~v~viE~~~~~----------~~~gra~~l~~~tle~l~~lGl~~~l~~~~~-~~~~~~~~~~~~~g~i~~~~~~~~ 103 (665)
T 1pn0_A 35 PDLKVRIIDKRSTK----------VYNGQADGLQCRTLESLKNLGLADKILSEAN-DMSTIALYNPDENGHIRRTDRIPD 103 (665)
T ss_dssp TTCCEEEECSSSSC----------CCSCSCCEECHHHHHHHHTTTCHHHHHTTCB-CCCEEEEEEECTTSCEEEEEEEES
T ss_pred CCCCEEEEeCCCCC----------CCCCceeEEChHHHHHHHHCCCHHHHHHhcc-ccceEEEEeCCCCcceEeecccCc
Confidence 79999999999876 4567799999999999999999999998776 6778888886532211 1221
Q ss_pred cCC-CCccceeeeehHHHHHHHHHHhhcCC--CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC---
Q 013625 81 RDV-NKEILGCVVENKVLHSSLLSCMQNTE--FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS--- 154 (439)
Q Consensus 81 ~~~-~~~~~~~~i~R~~l~~~L~~~~~~~~--~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--- 154 (439)
... ......+.++|..|+++|.+.+.+.+ +++|+++++|++++.+..... +. ++..|+|++.
T Consensus 104 ~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~-----~~-------~~~~V~v~~~~~~ 171 (665)
T 1pn0_A 104 TLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAE-----DP-------EAYPVTMTLRYMS 171 (665)
T ss_dssp SCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTT-----CT-------TCCCEEEEEEECC
T ss_pred ccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccc-----cC-------CCCCEEEEEEecc
Confidence 111 12334577999999999999999875 589999999999987210000 00 1235666553
Q ss_pred ---------------------------------------CC--cEEEecEEEEecCCCchhhhhhCCCCCCCcCCCeEEE
Q 013625 155 ---------------------------------------DG--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAII 193 (439)
Q Consensus 155 ---------------------------------------dg--~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~ 193 (439)
+| ++++||+||||||.+|.||+.+|+...+..+...+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~~~~v 251 (665)
T 1pn0_A 172 EDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDYIWGV 251 (665)
T ss_dssp GGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccEEEEE
Confidence 45 4799999999999999999999987765555443333
Q ss_pred EEEEe--ecCC-ceeEEEE-ecCCceEEeecCCCceEEEEEcCccChh----HhhCCCHHHHHHHHHHhccCCCCCCCCC
Q 013625 194 CTVEH--NKEN-YCAWQRF-LPAGPIALLPIGDNFSNIVWTMNPKDAS----DCKSMNEDDFVKILNHALDYGYGPHPKS 265 (439)
Q Consensus 194 ~~~~~--~~~~-~~~~~~~-~~~g~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 265 (439)
..+.. ..+. ......+ .+.++++++|++++..++++........ .....+.+++.+.+...+. +..
T Consensus 252 ~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~----~~~-- 325 (665)
T 1pn0_A 252 LDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFH----PYT-- 325 (665)
T ss_dssp EEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHT----TSC--
T ss_pred EEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhC----ccc--
Confidence 33322 2222 1122222 2678899999999888888777554311 2234567777777766443 000
Q ss_pred CCCCcccchhccccCccccccccccCCcceeeecccceeeecccccccccc-cCCEEEEcccccccCCcccccchhcHHH
Q 013625 266 ISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYV-SKRVVLIGDAAHTVHPLAGQGVNLGFGD 344 (439)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~rvvLvGDAAh~~~P~~g~G~~~al~d 344 (439)
..+ ....+...|++..+.+++|. .|||+|+|||||.|+|++|||+|+||+|
T Consensus 326 ---------------------------~~~-~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~D 377 (665)
T 1pn0_A 326 ---------------------------FDV-QQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMD 377 (665)
T ss_dssp ---------------------------CEE-EEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHH
T ss_pred ---------------------------Cce-eeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHH
Confidence 001 11223345777777789998 7999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcCC
Q 013625 345 ASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 396 (439)
Q Consensus 345 a~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~~~~ 396 (439)
|..|+++|...++.. ..+.+|+.|+++|++++..++..++.+.+++...
T Consensus 378 A~nLawkLa~vl~g~---a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~ 426 (665)
T 1pn0_A 378 TYNLGWKLGLVLTGR---AKRDILKTYEEERQPFAQALIDFDHQFSRLFSGR 426 (665)
T ss_dssp HHHHHHHHHHHHTTC---BCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999988632 2367999999999999999999999999998754
No 8
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=2.2e-37 Score=304.55 Aligned_cols=356 Identities=14% Similarity=0.088 Sum_probs=251.7
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCCC
Q 013625 5 KHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVN 84 (439)
Q Consensus 5 ~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (439)
+|++|+||||.+.+. .....++..|+|+++++|+++|+++++.+.+. +...+.+++.+.. ..++.....
T Consensus 24 ~G~~v~v~E~~~~~~--------~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~ 92 (394)
T 1k0i_A 24 AGIDNVILERQTPDY--------VLGRIRAGVLEQGMVDLLREAGVDRRMARDGL-VHEGVEIAFAGQR--RRIDLKRLS 92 (394)
T ss_dssp HTCCEEEECSSCHHH--------HHTCCCCCEECHHHHHHHHHTTCCHHHHHHCE-EESCEEEEETTEE--EEECHHHHH
T ss_pred CCCCEEEEeCCCCCc--------ccCCCceEeECHHHHHHHHHcCCcHHHHhcCC-ccceEEEEECCce--EEecccccc
Confidence 589999999988530 01123355799999999999999999988766 5666777765432 233321111
Q ss_pred CccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe-CCCc--EEEe
Q 013625 85 KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL-SDGT--SLYA 161 (439)
Q Consensus 85 ~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~dg~--~~~a 161 (439)
....++.++|..+.+.|.+.+.+.+ ++|+++++|++++. ++++.+.|++ .||+ +++|
T Consensus 93 ~~~~~~~~~~~~l~~~L~~~~~~~g-~~i~~~~~v~~i~~-------------------~~~~~~~v~~~~~g~~~~~~a 152 (394)
T 1k0i_A 93 GGKTVTVYGQTEVTRDLMEAREACG-ATTVYQAAEVRLHD-------------------LQGERPYVTFERDGERLRLDC 152 (394)
T ss_dssp TSCCEEECCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEC-------------------TTSSSCEEEEEETTEEEEEEC
T ss_pred CCCceEEechHHHHHHHHHHHHhcC-CeEEeceeEEEEEE-------------------ecCCceEEEEecCCcEEEEEe
Confidence 2345678999999999999998876 99999999999976 0124577887 7887 7999
Q ss_pred cEEEEecCCCchhhhhhCCCCCCCcCCC--eEEEEEEEeecC-CceeEEEEecCCceEEeecCCCceEEEEEcCccChhH
Q 013625 162 KLVVGADGGKSRVRELAGFKTTGWSYSQ--NAIICTVEHNKE-NYCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASD 238 (439)
Q Consensus 162 dlvVgADG~~S~vR~~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~ 238 (439)
|+||+|||.+|.||+.++.......... ..+.+.+....+ .........+++++++.+.+++..++++...... .
T Consensus 153 ~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~ 230 (394)
T 1k0i_A 153 DYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSQYYVQVPLSE--K 230 (394)
T ss_dssp SEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEECCTTCCEEEEEEETTEEEEEEEECTTC--C
T ss_pred CEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEEEcCCceEEEEecCCCcEEEEEEeCCCC--C
Confidence 9999999999999999975432111111 122222221111 1222222345666666666666667766664432 1
Q ss_pred hhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccccccccccC
Q 013625 239 CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSK 318 (439)
Q Consensus 239 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (439)
...++.+.+.+.+.+.+.. ...+... ..+ .. ....+|+......+|.+|
T Consensus 231 ~~~~~~~~~~~~l~~~~~~---------------~~~~~~~-----------~~~-~~----~~~~~~~~~~~~~~~~~g 279 (394)
T 1k0i_A 231 VEDWSDERFWTELKARLPS---------------EVAEKLV-----------TGP-SL----EKSIAPLRSFVVEPMQHG 279 (394)
T ss_dssp GGGCCHHHHHHHHHHTSCH---------------HHHHHCC-----------CCC-EE----EEEEEEEEEEEEECSEET
T ss_pred ccccCHHHHHHHHHHhhCc---------------ccccccc-----------cCc-ce----eeEEEEhhhhhccccccC
Confidence 2235666777777764430 0000000 000 00 112456666667889999
Q ss_pred CEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcC---
Q 013625 319 RVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSV--- 395 (439)
Q Consensus 319 rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~~~--- 395 (439)
||+|+|||||.|+|++|||+|+||+||..|+++|...+..+. ..+|+.|+++|++++..++..++.+..+++.
T Consensus 280 rv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~----~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~ 355 (394)
T 1k0i_A 280 RLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGR----GELLERYSAICLRRIWKAERFSWWMTSVLHRFPD 355 (394)
T ss_dssp TEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCC----GGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccCc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999999999999999999999999998765432 5689999999999999999999998888763
Q ss_pred CCChHHHHHHHHHHhhccChhHHHHHHHHHhcC
Q 013625 396 DFGPLNILRAAAFHGAQYISPLKRNIISYASGE 428 (439)
Q Consensus 396 ~~~~~~~~r~~~~~~~~~~~~l~~~~~~~~~g~ 428 (439)
..++.+++|+..|..+...|.+++.+++.++|.
T Consensus 356 ~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~ 388 (394)
T 1k0i_A 356 TDAFSQRIQQTELEYYLGSEAGLATIAENYVGL 388 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHSCC
T ss_pred CChHHHHHHHHHHHhhcCCHHHHHHHHHHhcCC
Confidence 357888999999999999999999999999997
No 9
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=8.6e-36 Score=304.62 Aligned_cols=322 Identities=20% Similarity=0.223 Sum_probs=237.5
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCcc--ceE---EEEeCCCcceeEE
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYF--DKM---QVWDYTGLGYTKY 78 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~--~~~---~~~~~~~~~~~~~ 78 (439)
..|++|+||||.+.. ...+++..++++++++|+++|+++++.+.+.... ..+ .+....+.....+
T Consensus 26 ~~G~~v~viEr~~~~----------~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 95 (535)
T 3ihg_A 26 RQGVRVLVVERRPGL----------SPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAESVRGEILRTV 95 (535)
T ss_dssp TTTCCEEEECSSSSC----------CCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEESSSSSCEEEEE
T ss_pred HCCCCEEEEeCCCCC----------CCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEeccCCceeeec
Confidence 469999999999987 4567799999999999999999999998776321 122 2223333333211
Q ss_pred ----ecc----CCCCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc---
Q 013625 79 ----NAR----DVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH--- 147 (439)
Q Consensus 79 ----~~~----~~~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--- 147 (439)
+.. ....+..++.++|..|++.|.+.+.+.+ ++|+++++|++++. +++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~g-v~i~~~~~v~~i~~--------------------~~~~~~ 154 (535)
T 3ihg_A 96 SESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHG-GAIRFGTRLLSFRQ--------------------HDDDAG 154 (535)
T ss_dssp ESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEE--------------------ECGGGC
T ss_pred cccccccccccccCCCCcccccCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------------CCCCcc
Confidence 110 0012333578999999999999999986 99999999999987 334
Q ss_pred -eeEEEeCCC---cEEEecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeecCC-----c-eeEEEEecCCceEE
Q 013625 148 -LAKLDLSDG---TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN-----Y-CAWQRFLPAGPIAL 217 (439)
Q Consensus 148 -~v~v~~~dg---~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~g~~~~ 217 (439)
++++++.++ .+++||+||+|||.+|.||+.+|+......+....+...+..+.+. . ..+..+.+.+..++
T Consensus 155 ~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 234 (535)
T 3ihg_A 155 AGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTF 234 (535)
T ss_dssp SEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEE
T ss_pred ccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEE
Confidence 888988877 6899999999999999999999988766555444444444433221 1 22333457777888
Q ss_pred eecCC-CceEEEEEcCccChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCccee
Q 013625 218 LPIGD-NFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVV 296 (439)
Q Consensus 218 ~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (439)
+|+.+ +...+.|.............+.+.+.+.+...+.... .+..+
T Consensus 235 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~-------------------------------~~~~~- 282 (535)
T 3ihg_A 235 GPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPE-------------------------------VKPEL- 282 (535)
T ss_dssp EECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSS-------------------------------CCCEE-
T ss_pred EEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCC-------------------------------CceeE-
Confidence 89886 5666666665544333445677788887777543000 00111
Q ss_pred eecccceeeecccccccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhc
Q 013625 297 KLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERK 376 (439)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~ 376 (439)
.....|++....+++|.+|||+|+|||||.|+|++|||+|+||+||..|+++|...++... .+.+|+.|+++|+
T Consensus 283 ---~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~---~~~lL~~Ye~eR~ 356 (535)
T 3ihg_A 283 ---VDIQGWEMAARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQA---GAGLLDTYEDERK 356 (535)
T ss_dssp ---EEEEEEEEEEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSS---CTTHHHHHHHHHH
T ss_pred ---EEeeEeeeeEEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCC---cHHHHHhhHHHHH
Confidence 1234578877788999999999999999999999999999999999999999999876432 3678999999999
Q ss_pred hhhHHHHHHHHHHHHhhc
Q 013625 377 PANIVMMAVLDGFQKAYS 394 (439)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~ 394 (439)
+++..++..+......+.
T Consensus 357 p~a~~~~~~s~~~~~~~~ 374 (535)
T 3ihg_A 357 VAAELVVAEALAIYAQRM 374 (535)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhHhhc
Confidence 999999999988876653
No 10
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=3.1e-35 Score=300.75 Aligned_cols=332 Identities=19% Similarity=0.224 Sum_probs=231.0
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccc--eEEEE-eCCCcceeEEec
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFD--KMQVW-DYTGLGYTKYNA 80 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~--~~~~~-~~~~~~~~~~~~ 80 (439)
.+|++|+||||.+.+ ...+++..++++++++|+++|+.+++.+.+.+... ...++ +..+.....++.
T Consensus 47 ~~G~~V~vlEr~~~~----------~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 116 (549)
T 2r0c_A 47 HRQVGHLVVEQTDGT----------ITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRVGGHEVYRIPL 116 (549)
T ss_dssp HTTCCEEEECSSCSC----------CSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSBTSCEEEEECC
T ss_pred HCCCCEEEEeCCCCC----------CCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccCCCceeEeecc
Confidence 369999999999877 44567999999999999999999999887663211 22222 233433333332
Q ss_pred cCC-------CCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe
Q 013625 81 RDV-------NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL 153 (439)
Q Consensus 81 ~~~-------~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~ 153 (439)
... ..+..++.++|..|+++|.+.+.+. |+++++|++++. ++++|++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~--------------------~~~~v~v~~ 172 (549)
T 2r0c_A 117 GTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQ--------------------RDDHVRATI 172 (549)
T ss_dssp CBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEE--------------------CSSCEEEEE
T ss_pred cccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEE--------------------eCCEEEEEE
Confidence 111 1233457899999999999999854 999999999987 446688887
Q ss_pred CC---C--cEEEecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeecC------C-ceeEEEEecC-CceEEeec
Q 013625 154 SD---G--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKE------N-YCAWQRFLPA-GPIALLPI 220 (439)
Q Consensus 154 ~d---g--~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~-g~~~~~p~ 220 (439)
.+ | .+++||+||||||.+|.||+.+|+......+...++.+.++.+.. . ...+..+.++ ++++++|+
T Consensus 173 ~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~ 252 (549)
T 2r0c_A 173 TDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRAL 252 (549)
T ss_dssp EETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEES
T ss_pred EECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEE
Confidence 65 6 479999999999999999999998877766666666666665411 1 1222333566 67888998
Q ss_pred CCCceEEEEEcCccChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecc
Q 013625 221 GDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLAS 300 (439)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (439)
+++. .+.+.++. ... ..+.+.+.+.+...+... ++..+.
T Consensus 253 ~~~~-~~~~~~~~-~~~---~~~~~~~~~~l~~~~~~~--------------------------------~~~~~~---- 291 (549)
T 2r0c_A 253 DGRG-LYRLTVGV-DDA---SKSTMDSFELVRRAVAFD--------------------------------TEIEVL---- 291 (549)
T ss_dssp SSSS-EEEEEEEC-STT---CCSCCCHHHHHHHHBCSC--------------------------------CCCEEE----
T ss_pred CCCc-EEEEEecC-CCC---CCCHHHHHHHHHHHhCCC--------------------------------CceeEE----
Confidence 6633 23333321 111 144555666666544300 000111
Q ss_pred cceeeecccccccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhH
Q 013625 301 ERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANI 380 (439)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~ 380 (439)
+...|++..+.+++|..|||+|+|||||.++|++|||+|+||+||..|+++|...++.. ..+.+|+.|+++|++++.
T Consensus 292 ~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~---a~~~lL~~Y~~eR~~~a~ 368 (549)
T 2r0c_A 292 SDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGW---AGPGLLATYEEERRPVAI 368 (549)
T ss_dssp EEEEEEECCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTC---SCTTTTHHHHHHHHHHHH
T ss_pred EEecchhHhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCC---CCHHHHHHHHHHHHHHHH
Confidence 22357777777899999999999999999999999999999999999999999988643 225789999999999999
Q ss_pred HHHHHHHHHHHhhcCC---------CChHHHHHHHHHHhhcc
Q 013625 381 VMMAVLDGFQKAYSVD---------FGPLNILRAAAFHGAQY 413 (439)
Q Consensus 381 ~~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~~~~~ 413 (439)
.++..+..+..++... ++....+|+.+.+.+..
T Consensus 369 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 410 (549)
T 2r0c_A 369 TSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAAVAEKLER 410 (549)
T ss_dssp HHHHC----------CCCCTTTTCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccccccCcchHHHHHHHHHHHHh
Confidence 9999999988887642 45566788887777643
No 11
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=1.5e-35 Score=291.84 Aligned_cols=314 Identities=19% Similarity=0.180 Sum_probs=220.7
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeC-CCcceeEEeccC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDY-TGLGYTKYNARD 82 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (439)
.+|++|+||||.+.+. ...++++.++|+++++|+++|+++ ...+. +...+.+++. ++......+.
T Consensus 26 ~~G~~v~v~E~~~~~~---------~~~~~g~~l~~~~~~~l~~~g~~~--~~~~~-~~~~~~~~~~~~g~~~~~~~~-- 91 (397)
T 2vou_A 26 DAGVDVDVYERSPQPL---------SGFGTGIVVQPELVHYLLEQGVEL--DSISV-PSSSMEYVDALTGERVGSVPA-- 91 (397)
T ss_dssp HTTCEEEEECSSSSSC---------CCCSCEEECCHHHHHHHHHTTCCG--GGTCB-CCCEEEEEETTTCCEEEEEEC--
T ss_pred hCCCCEEEEecCCCCC---------CccccccccChhHHHHHHHcCCcc--ccccc-cccceEEEecCCCCccccccC--
Confidence 3699999999998752 234568999999999999999987 33344 5677878887 6654443331
Q ss_pred CCCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEec
Q 013625 83 VNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAK 162 (439)
Q Consensus 83 ~~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~ad 162 (439)
+ ...++|..|.+.|.+.+. +++|+++++|++++. +++.++|+++||+++.||
T Consensus 92 ---~--~~~~~~~~l~~~L~~~~~---~~~i~~~~~v~~i~~--------------------~~~~v~v~~~~g~~~~ad 143 (397)
T 2vou_A 92 ---D--WRFTSYDSIYGGLYELFG---PERYHTSKCLVGLSQ--------------------DSETVQMRFSDGTKAEAN 143 (397)
T ss_dssp ---C--CCEEEHHHHHHHHHHHHC---STTEETTCCEEEEEE--------------------CSSCEEEEETTSCEEEES
T ss_pred ---c--ccccCHHHHHHHHHHhCC---CcEEEcCCEEEEEEe--------------------cCCEEEEEECCCCEEECC
Confidence 1 134789999999999873 489999999999987 456799999999999999
Q ss_pred EEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeecCC--------ceeEEEEecCCceEEeecCCC------ceEEE
Q 013625 163 LVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN--------YCAWQRFLPAGPIALLPIGDN------FSNIV 228 (439)
Q Consensus 163 lvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~p~~~~------~~~~~ 228 (439)
+||+|||.+|.||+.++ .......+...+.+.++..... ......+.+++++.++|++++ ..+++
T Consensus 144 ~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (397)
T 2vou_A 144 WVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQ 222 (397)
T ss_dssp EEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEE
T ss_pred EEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEE
Confidence 99999999999999998 5433333334555555422111 122233456667888888753 45677
Q ss_pred EEcCccChhHhh----CC-------------CHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccC
Q 013625 229 WTMNPKDASDCK----SM-------------NEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEV 291 (439)
Q Consensus 229 ~~~~~~~~~~~~----~~-------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (439)
|+.+........ .. ..+...+.+.+.+...|++ +..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~--------------- 275 (397)
T 2vou_A 223 WYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP------------FRD--------------- 275 (397)
T ss_dssp EEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH------------HHH---------------
T ss_pred EEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH------------HHH---------------
Confidence 877544311100 00 0122233333322111111 000
Q ss_pred CcceeeecccceeeecccccccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHH
Q 013625 292 PPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKY 371 (439)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Y 371 (439)
+.........+|+....+++|.+|||+|+|||||.|+|++|||+|+||+||..||++|.. ..+ ...+|+.|
T Consensus 276 ---~~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~----~~~--~~~~L~~Y 346 (397)
T 2vou_A 276 ---LVLNASSPFVTVVADATVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK----NHD--LRGSLQSW 346 (397)
T ss_dssp ---HHHHCSSCEEEEEEEBCCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH----CSC--HHHHHHHH
T ss_pred ---HHhccCCcceeeeeeecCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc----CCC--HHHHHHHH
Confidence 111111223467766667899999999999999999999999999999999999999975 223 37899999
Q ss_pred HHhhchhhHHHHHHHHHHHHhhcCC
Q 013625 372 EAERKPANIVMMAVLDGFQKAYSVD 396 (439)
Q Consensus 372 e~~r~~~~~~~~~~~~~~~~~~~~~ 396 (439)
+++|++++..++..++.+..+++..
T Consensus 347 e~~R~~~~~~~~~~s~~~~~~~~~~ 371 (397)
T 2vou_A 347 ETRQLQQGHAYLNKVKKMASRLQHG 371 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998764
No 12
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=1.1e-34 Score=301.46 Aligned_cols=328 Identities=19% Similarity=0.262 Sum_probs=229.8
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCC----Cccee--EE
Q 013625 5 KHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYT----GLGYT--KY 78 (439)
Q Consensus 5 ~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~----~~~~~--~~ 78 (439)
.|++|+||||.+.+ ...+++++|+++++++|+++|+.+++.+.+. +...+.+|+.+ +.... .+
T Consensus 55 ~G~~V~viEr~~~~----------~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~ 123 (639)
T 2dkh_A 55 PDIRTCIVEQKEGP----------MELGQADGIACRTMEMFEAFEFADSILKEAC-WINDVTFWKPDPGQPGRIARHGRV 123 (639)
T ss_dssp TTSCEEEECSSSSC----------CSSCSCCEECHHHHHHHHHTTCHHHHHHHSE-EECEEEEEEECTTSTTCEEEEEEE
T ss_pred CCCCEEEEeCCCCC----------CCCCceeeeCHHHHHHHHHcCcHHHHHHhcc-cccceEEECCCCCCCcceEeeccc
Confidence 69999999999887 3456799999999999999999999988776 56677778743 32211 12
Q ss_pred eccC-CCCccceeeeehHHHHHHHHHHhhcCC-CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC--
Q 013625 79 NARD-VNKEILGCVVENKVLHSSLLSCMQNTE-FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-- 154 (439)
Q Consensus 79 ~~~~-~~~~~~~~~i~R~~l~~~L~~~~~~~~-~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-- 154 (439)
+... .......+.++|..|+++|.+.+.+.| +++|+++++|++++.+ .+. .+..++|+++
T Consensus 124 ~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~---------~~~-------~~~~v~v~~~~~ 187 (639)
T 2dkh_A 124 QDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVD---------HGA-------ADYPVTVTLERC 187 (639)
T ss_dssp ESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEEC---------TTC-------SSCCEEEEEEEC
T ss_pred CcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEEC---------CCC-------CcCCEEEEEEec
Confidence 2111 112334578999999999999999997 4599999999999871 100 1135777765
Q ss_pred ----CC--cEEEecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEE--eecCC-ceeEEEEecCCceEEeecCCC-c
Q 013625 155 ----DG--TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVE--HNKEN-YCAWQRFLPAGPIALLPIGDN-F 224 (439)
Q Consensus 155 ----dg--~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~g~~~~~p~~~~-~ 224 (439)
+| .+++||+||||||.+|.||+.+|+...+..+...+....+. ...+. ........+.++++++|.+++ .
T Consensus 188 ~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~P~~~~~~ 267 (639)
T 2dkh_A 188 DAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREGGHL 267 (639)
T ss_dssp SGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEEEETTEEEEEEECTTSSC
T ss_pred cccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEEEcCCceEEEEEcCCCcE
Confidence 46 48999999999999999999999877655554443333322 12222 111222227888999999887 7
Q ss_pred eEEEEEcCcc--C-hhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeeccc
Q 013625 225 SNIVWTMNPK--D-ASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASE 301 (439)
Q Consensus 225 ~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (439)
.++++..... . .......+.+++.+.+...+. .+. ..+ ....+
T Consensus 268 ~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~--------------------------------~~~-~~~~~ 313 (639)
T 2dkh_A 268 VRFYVEMDKLDADERVASRNITVEQLIATAQRVLH-PYK--------------------------------LEV-KNVPW 313 (639)
T ss_dssp EEEEEECC-----------CCCHHHHHHHHHHHHT-TSC--------------------------------EEE-EEEEE
T ss_pred EEEEEECCCcCcccccccCCCCHHHHHHHHHHHhC-ccc--------------------------------Ccc-eeeeE
Confidence 7777776541 1 111233566777776665432 000 001 11122
Q ss_pred ceeeecccccccccc------------cCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHH
Q 013625 302 RMVFPLSLKHANNYV------------SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLK 369 (439)
Q Consensus 302 ~~~~~~~~~~~~~~~------------~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~ 369 (439)
...|++..+.+++|. .|||+|+|||||.++|++|||+|+||+||..|+++|...++.. ..+.+|+
T Consensus 314 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~---a~~~lL~ 390 (639)
T 2dkh_A 314 WSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQ---CAPELLH 390 (639)
T ss_dssp EEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTS---BCGGGGH
T ss_pred EEecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCC---CcHHHHH
Confidence 334666666677777 8999999999999999999999999999999999999988633 2367899
Q ss_pred HHHHhhchhhHHHHHHHHHHHHhhcCC
Q 013625 370 KYEAERKPANIVMMAVLDGFQKAYSVD 396 (439)
Q Consensus 370 ~Ye~~r~~~~~~~~~~~~~~~~~~~~~ 396 (439)
.|+++|++++..++..++.+..++...
T Consensus 391 ~Ye~eR~~~a~~~~~~s~~~~~~~~~~ 417 (639)
T 2dkh_A 391 TYSSERQVVAQQLIDFDREWAKMFSDP 417 (639)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999988888654
No 13
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=1.6e-34 Score=282.70 Aligned_cols=300 Identities=19% Similarity=0.188 Sum_probs=216.2
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+||||.+.+. ..++++.++++++++|+++|+++++...+. +...+.+++. |.....++..
T Consensus 32 ~~G~~v~viE~~~~~~----------~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~~~-g~~~~~~~~~-- 97 (379)
T 3alj_A 32 QNGWDVRLHEKSSELR----------AFGAGIYLWHNGLRVLEGLGALDDVLQGSH-TPPTYETWMH-NKSVSKETFN-- 97 (379)
T ss_dssp HTTCEEEEECSSSSCC----------CCSSEEEEEHHHHHHHHHTTCHHHHHTTCB-CCSCEEEEET-TEEEEEECGG--
T ss_pred HCCCCEEEEecCCCCC----------CCCceEEeCccHHHHHHHcCCHHHHHhhCC-CccceEEEeC-CceeeeccCC--
Confidence 3689999999998873 345699999999999999999999988776 6677888887 6554444321
Q ss_pred CCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecE
Q 013625 84 NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKL 163 (439)
Q Consensus 84 ~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adl 163 (439)
...++.++|..|.+.|.+.+.+.+ ++|+++++|++++. ++ +|+++||++++||+
T Consensus 98 --~~~~~~~~r~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~----------------------~~-~v~~~~g~~~~ad~ 151 (379)
T 3alj_A 98 --GLPWRIMTRSHLHDALVNRARALG-VDISVNSEAVAADP----------------------VG-RLTLQTGEVLEADL 151 (379)
T ss_dssp --GCCEEEEEHHHHHHHHHHHHHHTT-CEEESSCCEEEEET----------------------TT-EEEETTSCEEECSE
T ss_pred --CCceEEECHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEe----------------------CC-EEEECCCCEEEcCE
Confidence 223588999999999999999886 99999999999964 23 78889999999999
Q ss_pred EEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEee-----cC-CceeEE---EEecCCceEEeecCCCceEEEEEcCcc
Q 013625 164 VVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN-----KE-NYCAWQ---RFLPAGPIALLPIGDNFSNIVWTMNPK 234 (439)
Q Consensus 164 vVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~---~~~~~g~~~~~p~~~~~~~~~~~~~~~ 234 (439)
||+|||.+|.||+.++........+..++.+.++.. .. ...... .+.++++++++|++++...+++.....
T Consensus 152 vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 231 (379)
T 3alj_A 152 IVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAA 231 (379)
T ss_dssp EEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTT
T ss_pred EEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCC
Confidence 999999999999999875433334445566666553 12 122333 456788899999998877776665431
Q ss_pred ChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeec--ccceeeecccc-c
Q 013625 235 DASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLA--SERMVFPLSLK-H 311 (439)
Q Consensus 235 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~ 311 (439)
+.. ++.+.+.+..... . .. .+.. +.... .....|++... .
T Consensus 232 ~~~------~~~l~~~~~~~~~-----~-------~~-~~~~------------------~l~~~~~~~~~~~~~~~~~~ 274 (379)
T 3alj_A 232 DPR------GSSVPIDLEVWVE-----M-------FP-FLEP------------------CLIEAAKLKTARYDKYETTK 274 (379)
T ss_dssp CTT------TTCSSCCHHHHHH-----H-------CG-GGHH------------------HHHHHHTCTTCCEEEEEEEE
T ss_pred CCC------HHHHHHHHhcCCc-----h-------hc-cHHH------------------HHhhCCccceEEecccccCC
Confidence 110 0000000000000 0 00 0000 00000 12224555543 3
Q ss_pred ccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHH
Q 013625 312 ANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVL 386 (439)
Q Consensus 312 ~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~ 386 (439)
+++|.+|||+|||||||.++|++|||+|+||+||..|+++|... .+ ...+|+.|+++|++++..++..+
T Consensus 275 ~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~----~~--~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 275 LDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG----SS--VEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp ESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS----SC--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc----cC--HHHHHHHHHHHHHHHHHHHHHHh
Confidence 68899999999999999999999999999999999999999752 23 37899999999999999999887
No 14
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=8.6e-34 Score=280.40 Aligned_cols=315 Identities=17% Similarity=0.164 Sum_probs=215.0
Q ss_pred CCCcE-EEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccC
Q 013625 4 TKHLS-VAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARD 82 (439)
Q Consensus 4 ~~G~~-V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (439)
.+|++ |+||||.+.++ ..++++.|+|+++++|+++|+++++.+.+. +...+.+++..|......+...
T Consensus 25 ~~G~~~v~v~E~~~~~~----------~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~-~~~~~~~~~~~g~~~~~~~~~~ 93 (410)
T 3c96_A 25 QAGIGKVTLLESSSEIR----------PLGVGINIQPAAVEALAELGLGPALAATAI-PTHELRYIDQSGATVWSEPRGV 93 (410)
T ss_dssp HTTCSEEEEEESSSSCC----------CCSCEEEECHHHHHHHHHTTCHHHHHHHSE-EECEEEEECTTSCEEEEEECGG
T ss_pred hCCCCeEEEEECCCCcc----------cceeEEEEChHHHHHHHHCCChHHHHhhCC-CcceEEEEcCCCCEEeeccCCc
Confidence 36899 99999998873 345699999999999999999999988776 5667888887776554443211
Q ss_pred -CCCccceeeeehHHHHHHHHHHhhcC-CCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC---C-
Q 013625 83 -VNKEILGCVVENKVLHSSLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---G- 156 (439)
Q Consensus 83 -~~~~~~~~~i~R~~l~~~L~~~~~~~-~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g- 156 (439)
.......+.++|..|++.|.+.+.+. +.++|+++++|++++. +++++|++.+ |
T Consensus 94 ~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~---------------------~~~v~v~~~~~~~g~ 152 (410)
T 3c96_A 94 EAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE---------------------RDGRVLIGARDGHGK 152 (410)
T ss_dssp GGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE---------------------ETTEEEEEEEETTSC
T ss_pred cccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec---------------------CCccEEEEecCCCCC
Confidence 11223357899999999999999863 5468999999999964 1447787765 7
Q ss_pred -cEEEecEEEEecCCCchhhhhhCCCCCCCcCC-CeEEEEEEEeecC-CceeEEEEe--cCCceEEeecCC-----CceE
Q 013625 157 -TSLYAKLVVGADGGKSRVRELAGFKTTGWSYS-QNAIICTVEHNKE-NYCAWQRFL--PAGPIALLPIGD-----NFSN 226 (439)
Q Consensus 157 -~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~--~~g~~~~~p~~~-----~~~~ 226 (439)
.+++||+||||||.+|.||+.++.......+. ...+.+.++.... .......+. +.++++++|+.+ +...
T Consensus 153 ~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 232 (410)
T 3c96_A 153 PQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKTMIVANDEHWSRLVAYPISARHAAEGKSL 232 (410)
T ss_dssp EEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCTTSSEEEEEECTTCCEEEEEECCHHHHTTTCEE
T ss_pred ceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccccCCCeEEEecCCCCcEEEEEecCCcccCCCCcE
Confidence 58999999999999999999997654332232 2334444443321 223333344 367788999863 4556
Q ss_pred EEEEcCccChhH-----hh----CCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceee
Q 013625 227 IVWTMNPKDASD-----CK----SMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVK 297 (439)
Q Consensus 227 ~~~~~~~~~~~~-----~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (439)
+.|.+....... .. ....+++.+. +. +|..... .+. .+..
T Consensus 233 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~-~~~~~~~--------~~~------------------~~i~ 281 (410)
T 3c96_A 233 VNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPF----FA-DWDLGWF--------DIR------------------DLLT 281 (410)
T ss_dssp EEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHH----HT-TCCBTTB--------CHH------------------HHHH
T ss_pred EEEEEEecCcccccCCCccccCCCCCHHHHHHH----hc-CCCCchh--------HHH------------------HHHh
Confidence 666654322110 00 1122333322 22 2211000 000 0111
Q ss_pred ecccceeeecccc-cccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhc
Q 013625 298 LASERMVFPLSLK-HANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERK 376 (439)
Q Consensus 298 ~~~~~~~~~~~~~-~~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~ 376 (439)
.......||+... .+++|..|||+|||||||.|+|++|||+|+||+||..|+++|... .+ ...+|+.|+++|+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~----~~--~~~~L~~Ye~~r~ 355 (410)
T 3c96_A 282 RNQLILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN----AD--VAAALREYEEARR 355 (410)
T ss_dssp TCSEEEEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC----SS--HHHHHHHHHHHHH
T ss_pred cCcccceeecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc----CC--HHHHHHHHHHHHH
Confidence 1122234565543 368899999999999999999999999999999999999999873 22 3789999999999
Q ss_pred hhhHHHHHHHH
Q 013625 377 PANIVMMAVLD 387 (439)
Q Consensus 377 ~~~~~~~~~~~ 387 (439)
+++..++..++
T Consensus 356 ~~~~~~~~~s~ 366 (410)
T 3c96_A 356 PTANKIILANR 366 (410)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhH
Confidence 99999988776
No 15
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=7.8e-33 Score=272.46 Aligned_cols=328 Identities=17% Similarity=0.160 Sum_probs=218.4
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCH-hHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTP-ATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARD 82 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p-~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (439)
.+|++|+||||.+.+... ..+.++.+.+ +++++|+++|+++++...+. +... .+++.+|..........
T Consensus 47 ~~G~~v~v~E~~~~~~~~--------~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~-~~~~-~~~~~~g~~~~~~~~~~ 116 (398)
T 2xdo_A 47 QNGIDVSVYERDNDREAR--------IFGGTLDLHKGSGQEAMKKAGLLQTYYDLAL-PMGV-NIADEKGNILSTKNVKP 116 (398)
T ss_dssp TTTCEEEEEECSSSTTCC--------CCSCCEECCTTTHHHHHHHTTCHHHHHHHCB-CCCE-EEECSSSEEEEECCCGG
T ss_pred HCCCCEEEEeCCCCcccc--------ccCCeeeeCCccHHHHHHhcChHHHHHHhhc-ccce-EEECCCCCchhhccccc
Confidence 469999999999876321 1234566665 67999999999999988766 4444 67777665444331011
Q ss_pred CCCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEec
Q 013625 83 VNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAK 162 (439)
Q Consensus 83 ~~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~ad 162 (439)
. .......++|..|++.|.+.+.+ ++|+++++|++++. ++++++|+++||++++||
T Consensus 117 ~-~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~--------------------~~~~v~v~~~~g~~~~ad 172 (398)
T 2xdo_A 117 E-NRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEP--------------------GKKKWTLTFENKPSETAD 172 (398)
T ss_dssp G-TTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEE--------------------CSSSEEEEETTSCCEEES
T ss_pred c-CCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEE--------------------CCCEEEEEECCCcEEecC
Confidence 0 11223469999999999998852 68999999999987 446789999999999999
Q ss_pred EEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeec---C------CceeEEEEecCCceEEeecCCCceEEEEEcCc
Q 013625 163 LVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNK---E------NYCAWQRFLPAGPIALLPIGDNFSNIVWTMNP 233 (439)
Q Consensus 163 lvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~ 233 (439)
+||+|||.+|.||+.++.. .....+..++.+.++... + .......+.++..++++|.+++..++++....
T Consensus 173 ~vV~AdG~~S~vR~~l~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 251 (398)
T 2xdo_A 173 LVILANGGMSKVRKFVTDT-EVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKT 251 (398)
T ss_dssp EEEECSCTTCSCCTTTCCC-CCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEECCCcchhHHhhccCC-CceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEec
Confidence 9999999999999998642 222223344555554211 1 11222334566666677888777777666533
Q ss_pred cChh-H---hhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeeccc
Q 013625 234 KDAS-D---CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSL 309 (439)
Q Consensus 234 ~~~~-~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (439)
.... . ....+++.+.+.+.+.+. .|.+. +...+. .......+++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----------~~~~~~------------------~~~~~~~~~~~~ 301 (398)
T 2xdo_A 252 PDEWKNQTQVDFQNRNSVVDFLLKEFS-DWDER-----------YKELIH------------------TTLSFVGLATRI 301 (398)
T ss_dssp CTTC---CCSCTTCHHHHHHHHHHHTT-TSCHH-----------HHHHHH------------------HCSCCEEEEEEE
T ss_pred CcccccccccCcCCHHHHHHHHHHHHc-CCChH-----------HHHHHh------------------CcccceeeeeEe
Confidence 2211 1 112355667777776554 23221 111100 001111233332
Q ss_pred cc-cccccc-C--CEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHH
Q 013625 310 KH-ANNYVS-K--RVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAV 385 (439)
Q Consensus 310 ~~-~~~~~~-~--rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~ 385 (439)
.. ..+|.. + ||+|+|||||.|+|++|||+|+||+||..|+++|... +.+. ...+|+.|+++|++++..++..
T Consensus 302 ~~~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~-~~~~L~~Y~~~r~~~~~~~~~~ 377 (398)
T 2xdo_A 302 FPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG---KFNS-IEEAVKNYEQQMFIYGKEAQEE 377 (398)
T ss_dssp CCCCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC---CSSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc---cCch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 22 346764 5 9999999999999999999999999999999999874 2231 3789999999999999999998
Q ss_pred HHHHHH-hhcCCCChH
Q 013625 386 LDGFQK-AYSVDFGPL 400 (439)
Q Consensus 386 ~~~~~~-~~~~~~~~~ 400 (439)
+..... ++....++.
T Consensus 378 s~~~~~~~~~~~~~~~ 393 (398)
T 2xdo_A 378 STQNEIEMFKPDFTFQ 393 (398)
T ss_dssp HHHHHHHHHSTTCCC-
T ss_pred HHHHHHHHhCCCcccc
Confidence 877765 445444443
No 16
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=1.2e-31 Score=272.24 Aligned_cols=362 Identities=13% Similarity=0.091 Sum_probs=245.1
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHH-HHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEec--
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNA-- 80 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~-~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 80 (439)
.+|++|+||||.+.+. ...+..+.|++.. +|+.+|+++.+.+.+........+..........+..
T Consensus 28 ~~G~~V~liE~~~~~~-----------~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (512)
T 3e1t_A 28 MRGHRVLLLEREAFPR-----------HQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEPEPWTFGFTR 96 (512)
T ss_dssp TTTCCEEEECSSCSSC-----------CCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCSSCEEEESSS
T ss_pred hCCCCEEEEccCCCCC-----------CCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCcccccccccc
Confidence 4699999999998662 2236778888776 9999999999888766333333333222222222222
Q ss_pred cCCCCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc---eeEEEeCCCc
Q 013625 81 RDVNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH---LAKLDLSDGT 157 (439)
Q Consensus 81 ~~~~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~v~v~~~dg~ 157 (439)
.......+++.++|..|.+.|.+.+.+.| ++|+++++|+++.. +++ ++++...+|+
T Consensus 97 ~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~~~~V~~v~~--------------------~~~~v~gv~~~~~dG~ 155 (512)
T 3e1t_A 97 HPDDPYGFAYQVERARFDDMLLRNSERKG-VDVRERHEVIDVLF--------------------EGERAVGVRYRNTEGV 155 (512)
T ss_dssp SSSSTTCCEEBCCHHHHHHHHHHHHHHTT-CEEESSCEEEEEEE--------------------ETTEEEEEEEECSSSC
T ss_pred CCCCCcceeeEecHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------------ECCEEEEEEEEeCCCC
Confidence 22233456789999999999999999876 99999999999987 233 3666677885
Q ss_pred --EEEecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEee----cCC-ceeEEEEecCCceEEeecCCCceEEEEE
Q 013625 158 --SLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN----KEN-YCAWQRFLPAGPIALLPIGDNFSNIVWT 230 (439)
Q Consensus 158 --~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~g~~~~~p~~~~~~~~~~~ 230 (439)
++.||+||+|||.+|.+|+.++.......+...++.+.+... .+. ......+.+.|+++++|+.++..+++|.
T Consensus 156 ~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~ 235 (512)
T 3e1t_A 156 ELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAV 235 (512)
T ss_dssp EEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEE
T ss_pred EEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEE
Confidence 899999999999999999999765444445556666666532 122 3445667789999999999988888888
Q ss_pred cCccChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccc
Q 013625 231 MNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLK 310 (439)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (439)
.......... ...++....+....+ .+...+..... . ...........+....
T Consensus 236 ~~~~~~~~~~-~~~~~~~~~~l~~~p----------------~~~~~l~~~~~-------~---~~~~~~~i~~~~~~~~ 288 (512)
T 3e1t_A 236 VSREAAEAIK-DGHEAALLRYIDRCP----------------IIKEYLAPATR-------V---TTGDYGEIRIRKDYSY 288 (512)
T ss_dssp EEHHHHTTTS-SCHHHHHHHHHHTSH----------------HHHHHHTTCEE-------C---CSSTTSSCEEEESCCE
T ss_pred ecHHHhhhhc-CCHHHHHHHHHHhCc----------------hHHHHHhcCcc-------c---cccccccceeeccccc
Confidence 7554332221 223334333333111 11111110000 0 0000000001111122
Q ss_pred cccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHH
Q 013625 311 HANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQ 390 (439)
Q Consensus 311 ~~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~ 390 (439)
...+|..+||+|||||||.++|+.|||+|+|++||..|+++|...+.... ....+|+.|++.|+++...+..+...++
T Consensus 289 ~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~--~~~~aL~~Ye~~~~~~~~~~~~~~~~~y 366 (512)
T 3e1t_A 289 CNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEM--SEQRCFEEFERRYRREYGNFYQFLVAFY 366 (512)
T ss_dssp EESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778889999999999999999999999999999999999999876443 3478999999999999999999998888
Q ss_pred HhhcCCCChHHHHHHHHHHhhccChhHHHHHHHHHhcCCC
Q 013625 391 KAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQR 430 (439)
Q Consensus 391 ~~~~~~~~~~~~~r~~~~~~~~~~~~l~~~~~~~~~g~~~ 430 (439)
.+....+.+.... .+.+...+....+++..+.|..+
T Consensus 367 ~~~~r~ds~fW~~----~~~~~~~~~~~~~f~~~~~g~~~ 402 (512)
T 3e1t_A 367 DMNQDTDSYFWSA----RKIINTEERANEAFVRLIAGRSN 402 (512)
T ss_dssp HHCCCTTCHHHHT----SSCCCSHHHHHHHHHHHHTTCCC
T ss_pred hhhcCCCCHHHHH----HhhhccCcHHHHHHHHHHcCCCC
Confidence 8776444332211 12233457788888888888764
No 17
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.98 E-value=3.3e-30 Score=252.91 Aligned_cols=317 Identities=15% Similarity=0.135 Sum_probs=209.9
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+||||++.+. .+..+|.+|+++ +|+++|+..+...... .+.+..++.+++.....+... .
T Consensus 25 ~~G~~V~v~Er~~~~~---------~~~~~g~~l~~~---~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~ 90 (397)
T 3oz2_A 25 KYGLKTLMIEKRPEIG---------SPVRCGEGLSKG---ILNEADIKADRSFIAN-EVKGARIYGPSEKRPIILQSE-K 90 (397)
T ss_dssp HTTCCEEEECSSSSTT---------CSCCSCCEEETH---HHHHTTCCCCTTTEEE-EESEEEEECTTCSSCEEEECS-S
T ss_pred HCCCcEEEEeCCCCCC---------CCCceecccCHH---HHHHcCCCchhhhhhc-ccceEEEEeCCCceEeecccc-c
Confidence 4799999999998763 233447778764 6777887654433333 467788888777655554432 2
Q ss_pred CCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeE-EEe-CCC--cEE
Q 013625 84 NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDL-SDG--TSL 159 (439)
Q Consensus 84 ~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~-~dg--~~~ 159 (439)
.....+|.++|..|++.|.+.+.+.| ++++++++|+++.. +++.+. +.. .+| .++
T Consensus 91 ~~~~~~~~i~R~~~~~~L~~~a~~~G-~~~~~~~~v~~~~~--------------------~~~~~~~v~~~~~~~~~~~ 149 (397)
T 3oz2_A 91 AGNEVGYVLERDKFDKHLAALAAKAG-ADVWVKSPALGVIK--------------------ENGKVAGAKIRHNNEIVDV 149 (397)
T ss_dssp SSCCCEEEECHHHHHHHHHHHHHHHT-CEEESSCCEEEEEE--------------------ETTEEEEEEEEETTEEEEE
T ss_pred cCCceeEEEEHHHHHHHHHHHHHhcC-cEEeeeeeeeeeee--------------------ccceeeeeeecccccceEE
Confidence 34567899999999999999999987 99999999999977 223332 322 233 379
Q ss_pred EecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeec---CCceeEEEE---ecCCceEEeecCCCceEEEEEcCc
Q 013625 160 YAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNK---ENYCAWQRF---LPAGPIALLPIGDNFSNIVWTMNP 233 (439)
Q Consensus 160 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~g~~~~~p~~~~~~~~~~~~~~ 233 (439)
+||+||||||.+|.||+.++.......+........+.... ........+ .+.+++|++|.+++..++.+....
T Consensus 150 ~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~ 229 (397)
T 3oz2_A 150 RAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSI 229 (397)
T ss_dssp EEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEET
T ss_pred EEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeecc
Confidence 99999999999999999998776555554444443333222 222222222 366788999998888777776544
Q ss_pred cChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeeccccccc
Q 013625 234 KDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHAN 313 (439)
Q Consensus 234 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (439)
+.. .......+.+...+. .+ ..+.. . ...... ....|+. ....
T Consensus 230 ~~~-----~~~~~~~~~l~~~~~-~~------------~~l~~---~-------------~~~~~~--~~~~~~~-~~~~ 272 (397)
T 3oz2_A 230 NWI-----HNRFELKNYLDRFIE-NH------------PGLKK---G-------------QDIQLV--TGGVSVS-KVKM 272 (397)
T ss_dssp TTS-----CSHHHHHHHHHHHHH-TC------------HHHHT---S-------------EEEEEE--EEEEECC-CCCS
T ss_pred chh-----hhhhhHHHHHHHHHH-hC------------ccccc---c-------------ceeeee--ecccccc-Cccc
Confidence 321 112222222222111 00 00000 0 000000 0011221 2235
Q ss_pred ccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhh
Q 013625 314 NYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAY 393 (439)
Q Consensus 314 ~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~ 393 (439)
+|..+||+|+|||||.++|++|||+|+||+||..||++|.++++.++ ..+++|+.|++.++.++.+.+.......+.+
T Consensus 273 ~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~--~~~~~L~~Ye~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 273 PITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESND--YSPQMMQKYEKLIKERFERKHLRNWVAKEKL 350 (397)
T ss_dssp CCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999999999999999999999999999998774 3488999999999988877666655555544
Q ss_pred c
Q 013625 394 S 394 (439)
Q Consensus 394 ~ 394 (439)
.
T Consensus 351 ~ 351 (397)
T 3oz2_A 351 A 351 (397)
T ss_dssp H
T ss_pred H
Confidence 4
No 18
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.98 E-value=1.2e-30 Score=267.33 Aligned_cols=328 Identities=14% Similarity=0.137 Sum_probs=231.1
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+|||+.+.+. ...|..+.|.+.++|+.+|+++.+.+.+........+..........+.....
T Consensus 44 r~G~~V~LiEr~~~~~-----------~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (591)
T 3i3l_A 44 KLGHDVTIYERSAFPR-----------YRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQAPWTFSFAAP 112 (591)
T ss_dssp HTTCEEEEECSSCSSC-----------CCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSCCCEEEECCCC
T ss_pred cCCCCEEEEcCCCCCC-----------CceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCCccceeecccc
Confidence 3699999999998763 23478999999999999999999888765333333333332222222322211
Q ss_pred C----CccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC-CC--
Q 013625 84 N----KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-DG-- 156 (439)
Q Consensus 84 ~----~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg-- 156 (439)
. ..+.++.++|..|.+.|.+.+.+.| ++|+++++|+++.. +++..+.|+++ +|
T Consensus 113 ~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~V~~v~~-------------------~~g~~~~V~~~~~G~~ 172 (591)
T 3i3l_A 113 KVAPWVFDHAVQVKREEFDKLLLDEARSRG-ITVHEETPVTDVDL-------------------SDPDRVVLTVRRGGES 172 (591)
T ss_dssp --CTTCCSCEEECCHHHHHHHHHHHHHHTT-CEEETTCCEEEEEC-------------------CSTTCEEEEEEETTEE
T ss_pred cccccccCeeEEEcHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-------------------cCCCEEEEEEecCCce
Confidence 1 2345789999999999999999876 99999999999986 12466778876 77
Q ss_pred cEEEecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEee----cC-CceeEEEEecCCceEEeecCCCceEEEEEc
Q 013625 157 TSLYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHN----KE-NYCAWQRFLPAGPIALLPIGDNFSNIVWTM 231 (439)
Q Consensus 157 ~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~ 231 (439)
.++.||+||+|||.+|.+|+.++.......+....+.+.+... .+ ....+..+.+.|++|++|+.++..++.|..
T Consensus 173 ~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~ 252 (591)
T 3i3l_A 173 VTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVV 252 (591)
T ss_dssp EEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEE
T ss_pred EEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEc
Confidence 5899999999999999999999876443333334444444322 11 245566677999999999999888888887
Q ss_pred CccChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeeccccc
Q 013625 232 NPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKH 311 (439)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (439)
...........+.+++.+.+...++ .+...+... ........++.....
T Consensus 253 ~~~~~~~l~~~~~~~~~~~l~~~~p----------------~l~~~l~~~---------------~~~~~~~~~~~~~~~ 301 (591)
T 3i3l_A 253 DRSKSAEVREQGADAFYSSTLAKCA----------------KAMDILGGA---------------EQVDEVRIVQDWSYD 301 (591)
T ss_dssp EGGGHHHHHHHCHHHHHHHHHTTCH----------------HHHHHHTTC---------------EECSCCEEEEEEEEE
T ss_pred CHHHHhhhccCCHHHHHHHHHHhCH----------------HHHHHHhcC---------------ccccCceEecccccc
Confidence 6655443333445555555544221 111111100 001111122222334
Q ss_pred ccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHH-
Q 013625 312 ANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQ- 390 (439)
Q Consensus 312 ~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~- 390 (439)
..+|..+|++|||||||.++|+.|||+|+|++||..||++|...+..+. ....+++.|++.|++++.++..+...++
T Consensus 302 ~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~--~~~~al~~Y~~~~~~~~~~i~~~~~~~Y~ 379 (591)
T 3i3l_A 302 TEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGD--EKDAVHAWYNRTYREAYEQYHQFLASFYT 379 (591)
T ss_dssp ESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788899999999999999999999999999999999999999877543 2367899999999999999999988887
Q ss_pred -HhhcC
Q 013625 391 -KAYSV 395 (439)
Q Consensus 391 -~~~~~ 395 (439)
.....
T Consensus 380 ~~~~~r 385 (591)
T 3i3l_A 380 FASFTE 385 (591)
T ss_dssp HHHTTS
T ss_pred HhhccC
Confidence 44444
No 19
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.97 E-value=5.6e-30 Score=253.86 Aligned_cols=348 Identities=12% Similarity=0.111 Sum_probs=238.5
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+||||.+.++ ...|..+.|+++++|+.+|+++.+.+.+.....++.+...+......+.....
T Consensus 26 ~~G~~V~v~E~~~~~~-----------~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (421)
T 3nix_A 26 KSGFKVKIVEKQKFPR-----------FVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIADFNFSDQFS 94 (421)
T ss_dssp TTTCCEEEECSSCSSC-----------CCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEEEEETTSCSS
T ss_pred hCCCCEEEEeCCCCCC-----------CcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeEEEeehhhcC
Confidence 4699999999998763 24588999999999999999999988776445556665543322223222222
Q ss_pred CCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc--eeEEEeCCCc--EE
Q 013625 84 NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH--LAKLDLSDGT--SL 159 (439)
Q Consensus 84 ~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~v~v~~~dg~--~~ 159 (439)
.....++.++|..|++.|.+.+.+.| ++|+++++|++++. +++ .+.+...+|+ ++
T Consensus 95 ~~~~~~~~~~r~~~~~~L~~~a~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~v~~~~g~~~~~ 153 (421)
T 3nix_A 95 NGWNWTWQVPRGNFDKTLADEAARQG-VDVEYEVGVTDIKF--------------------FGTDSVTTIEDINGNKREI 153 (421)
T ss_dssp CSCCCEEECCHHHHHHHHHHHHHHHT-CEEECSEEEEEEEE--------------------ETTEEEEEEEETTSCEEEE
T ss_pred CCCCceeEECHHHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------------eCCEEEEEEEcCCCCEEEE
Confidence 23456789999999999999999886 99999999999987 223 3566678898 79
Q ss_pred EecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEeecCC-----ceeEEE---EecCCceEEeecCCCceEEEEEc
Q 013625 160 YAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEHNKEN-----YCAWQR---FLPAGPIALLPIGDNFSNIVWTM 231 (439)
Q Consensus 160 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~g~~~~~p~~~~~~~~~~~~ 231 (439)
+||+||+|||.+|.+|+.++.......+...++...+...... ...... ..+.+++|++|.+++...+.+..
T Consensus 154 ~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~ 233 (421)
T 3nix_A 154 EARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVG 233 (421)
T ss_dssp EEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEE
T ss_pred EcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEe
Confidence 9999999999999999999887666556666666666543211 111112 23678899999999988888877
Q ss_pred CccChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeeccccc
Q 013625 232 NPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKH 311 (439)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (439)
........ ..+.+++.+.+...++ .+...+... ........++.....
T Consensus 234 ~~~~~~~~-~~~~~~~l~~~~~~~p----------------~~~~~l~~~---------------~~~~~~~~~~~~~~~ 281 (421)
T 3nix_A 234 EPSYFDEY-TGTPEERMRAMIANEG----------------HIAERFKSE---------------EFLFEPRTIEGYAIS 281 (421)
T ss_dssp CHHHHTTS-CSCHHHHHHHHHHTCT----------------TTHHHHTTC---------------CBSSCCEEEECCCBE
T ss_pred cHHHhhhc-CCCHHHHHHHHHHhCc----------------HHHHHHhcC---------------ccccCceeeccccee
Confidence 55332221 1245555555554221 111111110 001122234555555
Q ss_pred ccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHH
Q 013625 312 ANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQK 391 (439)
Q Consensus 312 ~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~ 391 (439)
..+|..++++|||||||.++|+.|+|+++|++||..|+++|.+.+..+. ...+..|++.++........+....
T Consensus 282 ~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~----~~~~~~y~~~~~~~~~~~~~~~~~~-- 355 (421)
T 3nix_A 282 ASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEE----VNWEKDFVEHMMQGIDTFRSFVTGW-- 355 (421)
T ss_dssp ESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCC----CCHHHHTHHHHHHHHHHHHHHHHHH--
T ss_pred eeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCc----hhHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 6788889999999999999999999999999999999999999876442 2467789888877665554443222
Q ss_pred hhcCCCChHHHHHHHHHHhhccChhHHHHHHHHHhcCC
Q 013625 392 AYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASGEQ 429 (439)
Q Consensus 392 ~~~~~~~~~~~~r~~~~~~~~~~~~l~~~~~~~~~g~~ 429 (439)
+.. .+ +.++......|.+++.+.+.+.|+.
T Consensus 356 -~~~------~~-~~~~~~~~~~~~~~~~i~~~l~g~~ 385 (421)
T 3nix_A 356 -YDG------TL-HAVFFAKNPDPDHKRMICSVLAGYV 385 (421)
T ss_dssp -HHS------HH-HHHHTCSSCCHHHHHHHHHHHTTCT
T ss_pred -cch------hh-hhhhhCcCCChhHHHHHHHHhhhhh
Confidence 111 11 2233333455777888888877775
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.97 E-value=9.6e-30 Score=254.51 Aligned_cols=312 Identities=15% Similarity=0.116 Sum_probs=211.9
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+||||.+.++. ....++..+ +.++|+++|+.+.+.........++.++++++.....+
T Consensus 27 ~~G~~V~vlE~~~~~~~--------g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 90 (453)
T 3atr_A 27 RRGLKILLVDSKPWNRI--------GDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYSPDMQTVWTV----- 90 (453)
T ss_dssp SSSCCEEEECSSCGGGT--------TCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSCEEEE-----
T ss_pred HCCCCEEEEECCCCCCC--------Ccccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEECCCCceEEeE-----
Confidence 56999999999987521 112235555 57889999987655332222345666776665433332
Q ss_pred CCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeE-EEeC---CCc--
Q 013625 84 NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLS---DGT-- 157 (439)
Q Consensus 84 ~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~---dg~-- 157 (439)
+..++.++|..|++.|.+.+.+.| ++|+++++|+++.. +++.+. |++. +|+
T Consensus 91 --~~~~~~i~r~~l~~~L~~~a~~~g-v~i~~~~~v~~i~~--------------------~~~~v~gv~~~~~~~G~~~ 147 (453)
T 3atr_A 91 --NGEGFELNAPLYNQRVLKEAQDRG-VEIWDLTTAMKPIF--------------------EDGYVKGAVLFNRRTNEEL 147 (453)
T ss_dssp --EEEEEEECHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE--------------------ETTEEEEEEEEETTTTEEE
T ss_pred --CCCcEEEcHHHHHHHHHHHHHHcC-CEEEeCcEEEEEEE--------------------ECCEEEEEEEEEcCCCceE
Confidence 224688999999999999999876 99999999999987 334443 4443 776
Q ss_pred EEEecEEEEecCCCchhhhhhCCCCC--CCcC---CCeEEEEEEEeecCC---ceeEEEE----ecCCceEEeecCCCce
Q 013625 158 SLYAKLVVGADGGKSRVRELAGFKTT--GWSY---SQNAIICTVEHNKEN---YCAWQRF----LPAGPIALLPIGDNFS 225 (439)
Q Consensus 158 ~~~adlvVgADG~~S~vR~~l~~~~~--~~~~---~~~~~~~~~~~~~~~---~~~~~~~----~~~g~~~~~p~~~~~~ 225 (439)
+++||+||+|||.+|.+|+.++.... ...+ ...++.+.+....+. .....++ .+++++|++|.+++..
T Consensus 148 ~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~ 227 (453)
T 3atr_A 148 TVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKV 227 (453)
T ss_dssp EEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEE
T ss_pred EEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeE
Confidence 89999999999999999999976542 1111 134455555544322 2222222 2678999999998888
Q ss_pred EEEEEcCccChhHhhCCC-HHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeeccccee
Q 013625 226 NIVWTMNPKDASDCKSMN-EDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMV 304 (439)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (439)
++.+....... ..+ .+.+.+.+....+ .| . +. .+.... ...
T Consensus 228 ~vg~~~~~~~~----~~~~~~~~~~~l~~~~~-~~---------------~---~~-------------~~~~~~--~~~ 269 (453)
T 3atr_A 228 NVGLGIQGGMG----YPSIHEYYKKYLDKYAP-DV---------------D---KS-------------KLLVKG--GAL 269 (453)
T ss_dssp EEEEEEESSSC----CCCHHHHHHHHHHHHCT-TE---------------E---EE-------------EEEEEE--EEE
T ss_pred EEEEEecCCCC----CCCHHHHHHHHHHhhhh-hc---------------C---CC-------------eEEecc--cee
Confidence 88777643321 112 2333433332111 00 0 00 011111 011
Q ss_pred eecccccccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHH
Q 013625 305 FPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMA 384 (439)
Q Consensus 305 ~~~~~~~~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~ 384 (439)
.|. ....++|..+||+|+|||||.++|++|||+|+||+||..||++|...++.++ . ..++|+.|+++|++++...+.
T Consensus 270 ~p~-~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~-~-~~~~L~~Y~~~r~~~~~~~~~ 346 (453)
T 3atr_A 270 VPT-RRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGD-F-SASGLWDMNICYVNEYGAKQA 346 (453)
T ss_dssp EEC-SSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC-C-STTTTTHHHHHHHHHTHHHHH
T ss_pred ccC-CCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCC-c-cHHHHHHHHHHHHHHHHHHHH
Confidence 233 3446789899999999999999999999999999999999999999876543 2 256899999999999999999
Q ss_pred HHHHHHHhhcC
Q 013625 385 VLDGFQKAYSV 395 (439)
Q Consensus 385 ~~~~~~~~~~~ 395 (439)
.++.+.+++..
T Consensus 347 ~~~~~~~~~~~ 357 (453)
T 3atr_A 347 SLDIFRRFLQK 357 (453)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 99888888754
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.97 E-value=2.6e-29 Score=246.98 Aligned_cols=319 Identities=15% Similarity=0.132 Sum_probs=216.3
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+||||.+.+.. ...++..++ .++|+.+|+++....... .+.++.+++.++.....++....
T Consensus 25 ~~G~~V~l~E~~~~~g~---------~~~~~~~~~---~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 91 (397)
T 3cgv_A 25 KYGLKTLMIEKRPEIGS---------PVRCGEGLS---KGILNEADIKADRSFIAN-EVKGARIYGPSEKRPIILQSEKA 91 (397)
T ss_dssp HTTCCEEEECSSSSTTC---------SCCSCCEEE---THHHHHTTCCCCTTTEEE-EESEEEEECTTCSSCEEEC----
T ss_pred HCCCCEEEEeCCCCCCC---------CcccccccC---HHHHHHcCCCCChHHhhh-hcceEEEEcCCCCEEEEEecccc
Confidence 36999999999986521 223355554 467899998766333222 56788888887655344443222
Q ss_pred CCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeE-EEe---CCCcEE
Q 013625 84 NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDL---SDGTSL 159 (439)
Q Consensus 84 ~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~---~dg~~~ 159 (439)
....++.++|..|++.|.+.+.+.| ++|+++++|++++. +++.+. |++ .++.++
T Consensus 92 -~~~~~~~~~~~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~--------------------~~~~v~gv~~~~~~~~~~~ 149 (397)
T 3cgv_A 92 -GNEVGYVLERDKFDKHLAALAAKAG-ADVWVKSPALGVIK--------------------ENGKVAGAKIRHNNEIVDV 149 (397)
T ss_dssp --CCCEEEECHHHHHHHHHHHHHHHT-CEEESSCCEEEEEE--------------------ETTEEEEEEEEETTEEEEE
T ss_pred -CCceeEEEeHHHHHHHHHHHHHhCC-CEEEECCEEEEEEE--------------------eCCEEEEEEEEECCeEEEE
Confidence 2456799999999999999999876 99999999999987 345555 666 355699
Q ss_pred EecEEEEecCCCchhhhhhCCCC-CCCcC-CCeEEEEEEEee-cCCceeEEEE---ecCCceEEeecCCCceEEEEEcCc
Q 013625 160 YAKLVVGADGGKSRVRELAGFKT-TGWSY-SQNAIICTVEHN-KENYCAWQRF---LPAGPIALLPIGDNFSNIVWTMNP 233 (439)
Q Consensus 160 ~adlvVgADG~~S~vR~~l~~~~-~~~~~-~~~~~~~~~~~~-~~~~~~~~~~---~~~g~~~~~p~~~~~~~~~~~~~~ 233 (439)
+||+||+|||.+|.+|+.++... ..... ....+...+... .+.......+ .+.+++|++|.+++..++.|....
T Consensus 150 ~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~ 229 (397)
T 3cgv_A 150 RAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSI 229 (397)
T ss_dssp EEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEET
T ss_pred EcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEecc
Confidence 99999999999999999998765 32111 112222333322 2223333332 467889999999988888887755
Q ss_pred cChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeeccccccc
Q 013625 234 KDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHAN 313 (439)
Q Consensus 234 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (439)
... .......+.+...+. .. + .+. . ..+.. .....+|+. ....
T Consensus 230 ~~~-----~~~~~~~~~l~~~~~-~~-~-----------~~~---------------~-~~~~~--~~~~~~p~~-~~~~ 272 (397)
T 3cgv_A 230 NWI-----HNRFELKNYLDRFIE-NH-P-----------GLK---------------K-GQDIQ--LVTGGVSVS-KVKM 272 (397)
T ss_dssp TTC-----SCHHHHHHHHHHHHH-TC-H-----------HHH---------------T-SEEEE--EEEEEEECC-CCCS
T ss_pred ccc-----cCCCCHHHHHHHHHH-hC-c-----------CCC---------------C-CeEEe--eeeeeeecC-CCcc
Confidence 432 111222222222111 00 0 000 0 00111 112234553 3367
Q ss_pred ccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhh
Q 013625 314 NYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAY 393 (439)
Q Consensus 314 ~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~ 393 (439)
+|..+|++|+|||||.++|++|||+|+|++||..|+++|.+.+..++. ...+|+.|++.|+++..+.+..+..+.+++
T Consensus 273 ~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 3cgv_A 273 PITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDY--SPQMMQKYEKLIKERFERKHLRNWVAKEKL 350 (397)
T ss_dssp CCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999998865542 478999999999999999999999988887
Q ss_pred cCC
Q 013625 394 SVD 396 (439)
Q Consensus 394 ~~~ 396 (439)
...
T Consensus 351 ~~~ 353 (397)
T 3cgv_A 351 AML 353 (397)
T ss_dssp TTC
T ss_pred HhC
Confidence 653
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.97 E-value=1.5e-30 Score=254.72 Aligned_cols=313 Identities=12% Similarity=0.072 Sum_probs=201.2
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCc-hh-hhhhhcCccceEEEEeCCCcceeEEeccC
Q 013625 5 KHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAW-QY-VQQHRHAYFDKMQVWDYTGLGYTKYNARD 82 (439)
Q Consensus 5 ~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~-~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (439)
+|++|+||||.+.++ ..++++.+++++++.+...+++ +. +..... ....+.+++ .|... . .
T Consensus 24 ~G~~V~v~E~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~~~-~--~-- 86 (381)
T 3c4a_A 24 PLWAIDIVEKNDEQE----------VLGWGVVLPGRPGQHPANPLSYLDAPERLNPQ-FLEDFKLVH-HNEPS-L--M-- 86 (381)
T ss_dssp TTSEEEEECSSCTTC----------CCCSEEEEESCTTTCTTCGGGGSSCGGGGCCE-EECCEEEEE-SSSEE-E--C--
T ss_pred CCCCEEEEECCCCCC----------cceeEEEeCcHHHHhhcCcchhhhhhHHHhhc-cccceEEEe-CCeeE-E--e--
Confidence 399999999998874 3455999999988843333454 44 444333 445666666 33322 1 1
Q ss_pred CCCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEec
Q 013625 83 VNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAK 162 (439)
Q Consensus 83 ~~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~ad 162 (439)
......+.++|..|++.|.+.+.+.+ ++|+++++|++++. . +++.||
T Consensus 87 -~~~~~~~~~~r~~l~~~L~~~~~~~g-v~i~~~~~v~~i~~--------------------~-----------~~~~ad 133 (381)
T 3c4a_A 87 -STGVLLCGVERRGLVHALRDKCRSQG-IAIRFESPLLEHGE--------------------L-----------PLADYD 133 (381)
T ss_dssp -CCCSCEEEEEHHHHHHHHHHHHHHTT-CEEETTCCCCSGGG--------------------C-----------CGGGCS
T ss_pred -cCCCceeeecHHHHHHHHHHHHHHCC-CEEEeCCEeccchh--------------------c-----------ccccCC
Confidence 11223468999999999999999886 99999999999854 1 135799
Q ss_pred EEEEecCCCchhhhhhC----CCCCCCcCCCeEEEEEEEeecCCceeEEEEecCCceE--EeecCCCceEEEEEcCccCh
Q 013625 163 LVVGADGGKSRVRELAG----FKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIA--LLPIGDNFSNIVWTMNPKDA 236 (439)
Q Consensus 163 lvVgADG~~S~vR~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~p~~~~~~~~~~~~~~~~~ 236 (439)
+||+|||.+|. |+.+. +.... ......+.+.... .+....+..+.+.|+++ ++|++++...+ |+....+.
T Consensus 134 ~vV~AdG~~S~-R~~l~~~~g~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~-~~~~~~~~ 209 (381)
T 3c4a_A 134 LVVLANGVNHK-TAHFTEALVPQVDY-GRNKYIWYGTSQL-FDQMNLVFRTHGKDIFIAHAYKYSDTMSTF-IVECSEET 209 (381)
T ss_dssp EEEECCGGGGG-TCCSSGGGCCCCEE-EEEEEEEEEESSC-CSSEEEEEEEETTEEEEEEEEECSSSCEEE-EEEECHHH
T ss_pred EEEECCCCCch-HHhhhhhcCCCccc-CCccEEEEecCCC-CCcceeeEeeCCCcEEEEEEEEecCCeEEE-EEECCccc
Confidence 99999999999 99873 22111 0112223222211 11112222234566644 58988776543 33322211
Q ss_pred ---hHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeeccc-ccc
Q 013625 237 ---SDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSL-KHA 312 (439)
Q Consensus 237 ---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 312 (439)
......+.+...+.+.+.+. +|.+.. .+..... ..|++.. ..+
T Consensus 210 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~------------------------------~l~~~~~--~~~~~~~~~~~ 256 (381)
T 3c4a_A 210 YARARLGEMSEEASAEYVAKVFQ-AELGGH------------------------------GLVSQPG--LGWRNFMTLSH 256 (381)
T ss_dssp HHHTTSSSSCHHHHHHHHHHHTH-HHHTTC------------------------------CCBCCTT--TCSEEEEECCC
T ss_pred cccCCcccCChHHHHHHHHHHhc-ccCCCc------------------------------hhhcCCC--cceeeeccccC
Confidence 11123456667777766553 111100 0000000 1244432 346
Q ss_pred cccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHh
Q 013625 313 NNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKA 392 (439)
Q Consensus 313 ~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~ 392 (439)
++|.+|||+|||||||+|+|++|||+|+||+||..||++|... .+ ...+|+.|+++|++++..++..++.+..+
T Consensus 257 ~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~----~~--~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~ 330 (381)
T 3c4a_A 257 DRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE----DG--VPAALKRFEERALPLVQLFRGHADNSRVW 330 (381)
T ss_dssp SCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS----SS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc----cc--HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 8899999999999999999999999999999999999999874 23 37899999999999999999999998855
Q ss_pred hcCC-----CChHHHHHHHHHHh
Q 013625 393 YSVD-----FGPLNILRAAAFHG 410 (439)
Q Consensus 393 ~~~~-----~~~~~~~r~~~~~~ 410 (439)
+... .++....|+..++.
T Consensus 331 ~~~~~~~~~~~~~~~~r~~~~~~ 353 (381)
T 3c4a_A 331 FETVEERMHLSSAEFVQSFDARR 353 (381)
T ss_dssp HHTCSCC------CHHHHGGGTT
T ss_pred hhchhhhhcCCHHHHHHHHhhcc
Confidence 4332 24556677777665
No 23
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.95 E-value=9.4e-26 Score=229.09 Aligned_cols=240 Identities=11% Similarity=0.073 Sum_probs=165.8
Q ss_pred ccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEE
Q 013625 86 EILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVV 165 (439)
Q Consensus 86 ~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvV 165 (439)
..+++.++|..|.+.|.+.+.+.| ++++++ +|++++. ++ ++..+.|++++|++++||+||
T Consensus 164 ~~~~~~~~~~~l~~~L~~~a~~~g-v~~~~~-~v~~i~~-----------~~-------~~~~~~v~~~~g~~~~ad~vV 223 (511)
T 2weu_A 164 FPYAYHFDADEVARYLSEYAIARG-VRHVVD-DVQHVGQ-----------DE-------RGWISGVHTKQHGEISGDLFV 223 (511)
T ss_dssp CSCEEEECHHHHHHHHHHHHHHTT-CEEEEC-CEEEEEE-----------CT-------TSCEEEEEESSSCEEECSEEE
T ss_pred CCeeEEEcHHHHHHHHHHHHHHCC-CEEEEC-eEeEEEE-----------cC-------CCCEEEEEECCCCEEEcCEEE
Confidence 345788999999999999999876 999999 9999976 00 123477888999999999999
Q ss_pred EecCCCchhhh-hhCCCCCC---CcCCCeEEEEEEEeecC---CceeEEEEecCCceEEeecCCCceEEEEEcCccChhH
Q 013625 166 GADGGKSRVRE-LAGFKTTG---WSYSQNAIICTVEHNKE---NYCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASD 238 (439)
Q Consensus 166 gADG~~S~vR~-~l~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~ 238 (439)
+|||.+|.+|+ .++..... .......+...++...+ .......+.+.|++|++|+.+ ...+.+.....
T Consensus 224 ~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~---- 298 (511)
T 2weu_A 224 DCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYSDE---- 298 (511)
T ss_dssp ECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEECTT----
T ss_pred ECCCcchHHHHHHhCCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEECCC----
Confidence 99999999964 55655321 12223334333433222 122334456788999999987 34444443221
Q ss_pred hhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccccccccccC
Q 013625 239 CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSK 318 (439)
Q Consensus 239 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (439)
..+.++..+.+...+. +.+. + ......++.....++|..+
T Consensus 299 --~~~~~~~~~~l~~~~~--~~~~--------------------------------~----~~~~~~~~~~~~~~~~~~~ 338 (511)
T 2weu_A 299 --FISPEEAERELRSTVA--PGRD--------------------------------D----LEANHIQMRIGRNERTWIN 338 (511)
T ss_dssp --TSCHHHHHHHHHHHHC--TTCT--------------------------------T----SCCEEEECCCEEESCSEET
T ss_pred --CCCHHHHHHHHHHHhC--cccc--------------------------------c----ccceeEEeeccccccccCC
Confidence 1345556666665442 1110 0 0011123333335667789
Q ss_pred CEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcCC
Q 013625 319 RVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 396 (439)
Q Consensus 319 rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~~~~ 396 (439)
||+|||||||.++|+.|+|+|+|++||..|+++|.. +.+ .+.+|+.|++.|++++.++..+......+....
T Consensus 339 rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~----~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~ 410 (511)
T 2weu_A 339 NCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG----ERW--DPVLISAYNERMAHMVDGVKEFLVLHYKGAQRE 410 (511)
T ss_dssp TEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CEEEEechhhccCccccccHHHHHHHHHHHHHHhcc----CCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 999999999999999999999999999999998864 222 378999999999999999998877777765433
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.95 E-value=3.1e-26 Score=233.17 Aligned_cols=313 Identities=14% Similarity=0.118 Sum_probs=203.8
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchh--hhhhhcCccceEEEEeCCC-------cc
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQY--VQQHRHAYFDKMQVWDYTG-------LG 74 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~--l~~~~~~~~~~~~~~~~~~-------~~ 74 (439)
.+|++|+|||+.+.++ .+.|+++.|+++++|+.+|+.+. +.+.+.....++.+.+... ..
T Consensus 40 ~~G~~V~liE~~~~~~-----------~g~g~~~~p~~~~~l~~lGi~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 108 (526)
T 2pyx_A 40 SPKLNITLIESPDVAT-----------IGVGEGTWPSMRSTLSKIGIDENDFIRQCDASFKQGSRFINWCKDPQSNVADS 108 (526)
T ss_dssp SCSCEEEEEECSSCCC-----------CCSCEECCTHHHHHHHHHTCCHHHHHHHTTCEEECEEEEESCSSCCBTTBCCE
T ss_pred CCCCeEEEEeCCCCCC-----------cceeeechHhHHHHHHHcCCCHHHHHHHcCCEEECCCcccCCCccccCCCCCc
Confidence 3799999999977652 22388999999999999999986 5554442233444432111 10
Q ss_pred ee------------EEec---------------------------------cCC-CCccceeeeehHHHHHHHHHHhhc-
Q 013625 75 YT------------KYNA---------------------------------RDV-NKEILGCVVENKVLHSSLLSCMQN- 107 (439)
Q Consensus 75 ~~------------~~~~---------------------------------~~~-~~~~~~~~i~R~~l~~~L~~~~~~- 107 (439)
.. .+.. ..+ .....++.++|..|.+.|.+.+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~ 188 (526)
T 2pyx_A 109 YLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQNNYGYHLNAAKFSQLLTEHCTQK 188 (526)
T ss_dssp EEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCSSCCEEEECHHHHHHHHHHHHHHT
T ss_pred eecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCCCCCeeEEEcHHHHHHHHHHHHHhc
Confidence 00 0100 000 112356889999999999999998
Q ss_pred CCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh-hhhhCCCCCCCc
Q 013625 108 TEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV-RELAGFKTTGWS 186 (439)
Q Consensus 108 ~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v-R~~l~~~~~~~~ 186 (439)
.| ++++++ +|++++. ++ ++..+.|.+++|.++.||+||+|||.+|.+ |+.++.......
T Consensus 189 ~G-v~i~~~-~v~~i~~-----------~~-------~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~~~~ 248 (526)
T 2pyx_A 189 LG-VTHIRD-HVSQIIN-----------NQ-------HGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFLSQK 248 (526)
T ss_dssp SC-CEEEEC-CEEEEEE-----------CT-------TSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEEECH
T ss_pred CC-CEEEEe-EEEEEEe-----------cC-------CCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCccccc
Confidence 66 999999 6999976 00 123457888888889999999999999999 667776542211
Q ss_pred ---CCCeEEEEEEEeec----CCceeEEEEecCCceEEeecCCCceEEEEEcCccChhHhhCCCHHHHHHHHHHhccCCC
Q 013625 187 ---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGY 259 (439)
Q Consensus 187 ---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 259 (439)
....++...+.... ........+.+.|++|++|+.++. .+.++..... .+.+...+.+...+. .+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~-~~~~v~~~~~------~~~~~~~~~l~~~l~-~~ 320 (526)
T 2pyx_A 249 SVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRK-GVGYVYSSSH------TNDIDAQKTLFNYLG-VD 320 (526)
T ss_dssp HHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEE-EEEEEECTTT------CCHHHHHHHHHHHHT-CC
T ss_pred ccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCce-EEEEEecCCC------CChHHHHHHHHHHHH-hc
Confidence 12234444444321 112223335578899999998743 3344433221 233444455554332 11
Q ss_pred CCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccccccccccCCEEEEcccccccCCcccccch
Q 013625 260 GPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVN 339 (439)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAh~~~P~~g~G~~ 339 (439)
++ .++ . .....+++......+|..|||+|||||||.++|+.|||+|
T Consensus 321 ~~-----------~l~----------------------~-~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~ 366 (526)
T 2pyx_A 321 GA-----------AAD----------------------K-LEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALA 366 (526)
T ss_dssp HH-----------HHH----------------------H-CCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHH
T ss_pred Cc-----------ccc----------------------c-CCceEEecccCccccccCCCEEEEEhhhcccCccccccHH
Confidence 00 000 0 0111345555556778889999999999999999999999
Q ss_pred hcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhc
Q 013625 340 LGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYS 394 (439)
Q Consensus 340 ~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~~ 394 (439)
+|++||..|+++|.... . ..+.+++.|+++|++++.++.++....+.+..
T Consensus 367 ~ai~da~~La~~L~~~~---~--~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~ 416 (526)
T 2pyx_A 367 LIEWTASTLAQQLPPNR---M--VMDTISARVNERYQQHWQQIIDFLKLHYVISQ 416 (526)
T ss_dssp HHHHHHHHHHHTCCSCH---H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhhhcC---C--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999886321 1 13678999999999999999887766665543
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.94 E-value=7.7e-25 Score=223.59 Aligned_cols=235 Identities=11% Similarity=0.076 Sum_probs=161.3
Q ss_pred cceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEE
Q 013625 87 ILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVG 166 (439)
Q Consensus 87 ~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVg 166 (439)
++++.++|..|.+.|.+.+.+.| ++++++ +|+++.. ++ ++..+.|.+++|+++.||+||+
T Consensus 157 ~~~~~i~~~~l~~~L~~~a~~~g-v~~~~~-~v~~i~~-----------~~-------~g~~~~v~~~~g~~i~ad~vV~ 216 (538)
T 2aqj_A 157 SHAWHFDAHLVADFLKRWAVERG-VNRVVD-EVVDVRL-----------NN-------RGYISNLLTKEGRTLEADLFID 216 (538)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTT-CEEEEC-CEEEEEE-----------CT-------TSCEEEEEETTSCEECCSEEEE
T ss_pred CccEEEeHHHHHHHHHHHHHHCC-CEEEEe-eEeEEEE-----------cC-------CCcEEEEEECCCcEEEeCEEEE
Confidence 45688999999999999999876 999999 8999976 00 1234678889998999999999
Q ss_pred ecCCCchhhh-hhCCCCCCCc---CCCeEEEEEEEeec----CCceeEEEEecCCceEEeecCCCceEEEEEcCccChhH
Q 013625 167 ADGGKSRVRE-LAGFKTTGWS---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASD 238 (439)
Q Consensus 167 ADG~~S~vR~-~l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~ 238 (439)
|||.+|.+|+ .++....... ....++...++... ........+.+.|++|++|+.++ ..+.++....
T Consensus 217 A~G~~s~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~~~---- 291 (538)
T 2aqj_A 217 CSGMRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFSSH---- 291 (538)
T ss_dssp CCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEECTT----
T ss_pred CCCCchhhHHHHhCCCccccccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEEcCC----
Confidence 9999999965 4555432211 12234443443221 11122233567889999999874 3344443221
Q ss_pred hhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccccccccccC
Q 013625 239 CKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSK 318 (439)
Q Consensus 239 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (439)
..+.+...+.+...+.. . + + .....+++......+|..|
T Consensus 292 --~~~~~~~~~~l~~~~~~-~-~---------------------------------~----~~~~~~~~~~~~~~~~~~g 330 (538)
T 2aqj_A 292 --FTSRDQATADFLKLWGL-S-D---------------------------------N----QPLNQIKFRVGRNKRAWVN 330 (538)
T ss_dssp --TSCHHHHHHHHHHHHTC-C-T---------------------------------T----CCCEEEECCCEEESCSEET
T ss_pred --CCChHHHHHHHHHHhcC-C-C---------------------------------C----CCceEEeeccccccccccC
Confidence 12445566666664430 0 0 0 0011234444445677789
Q ss_pred CEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhh
Q 013625 319 RVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAY 393 (439)
Q Consensus 319 rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~ 393 (439)
||+|||||||.++|+.|||+|+|++||..|+++|.. +.+ .+.+|+.|+++|++++.++..+.......-
T Consensus 331 rvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~----~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~ 399 (538)
T 2aqj_A 331 NCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD----TSF--DPRLSDAFNAEIVHMFDDCRDFVQAHYFTT 399 (538)
T ss_dssp TEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc----cCC--CHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999988752 222 378999999999999988888766665543
No 26
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.94 E-value=5.7e-25 Score=225.87 Aligned_cols=319 Identities=9% Similarity=0.023 Sum_probs=193.4
Q ss_pred CcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCcc------ceEEEEeCCCcceeEEe
Q 013625 6 HLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYF------DKMQVWDYTGLGYTKYN 79 (439)
Q Consensus 6 G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~ 79 (439)
|++|+||||++.+.. ...+|..|.|++++.| ++ ++.+.+. ++ ..+.+.+..+. ..++
T Consensus 64 G~~V~vlEk~~~~g~---------~~~~g~~l~~~~l~~l--l~---~~~~~g~-~~~~~~~~~~~~~~~~~~~--~~~~ 126 (584)
T 2gmh_A 64 DLRVCLVEKAAHIGA---------HTLSGACLDPRAFEEL--FP---DWKEKGA-PLNTPVTEDRFGILTEKYR--IPVP 126 (584)
T ss_dssp CCCEEEECSSSSTTT---------TCCCCCEECTHHHHHH--CT---THHHHTC-CCCEECCEEEEEEECSSCE--EECC
T ss_pred CCcEEEEeCCCCCCC---------ccccccccCHHHHHHH--HH---HHHhcCC-ceeeeechhheeeeccCCC--cccc
Confidence 899999999987632 1234677899988876 33 2333232 21 22434444322 2222
Q ss_pred c-cC-CCCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCcee-EEEeC--
Q 013625 80 A-RD-VNKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDLS-- 154 (439)
Q Consensus 80 ~-~~-~~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~-- 154 (439)
. .. ......++.++|..|+++|.+.+.+.| ++|+++++|+++..+ .++.+ .|.+.
T Consensus 127 ~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~v~~l~~~-------------------~~g~V~gV~~~~~ 186 (584)
T 2gmh_A 127 ILPGLPMNNHGNYVVRLGHLVSWMGEQAEALG-VEVYPGYAAAEILFH-------------------EDGSVKGIATNDV 186 (584)
T ss_dssp CCTTSTTCCTTCEECCHHHHHHHHHHHHHHTT-CEEETTCCEEEEEEC-------------------TTSSEEEEEECCE
T ss_pred ccCccccccCCCEEEeHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEEc-------------------CCCCEEEEEeCCc
Confidence 1 01 112233588999999999999999986 999999999999871 11223 36554
Q ss_pred ----C---------CcEEEecEEEEecCCCchhhhhh----CCCCCCCcCC-CeEEEEEEEeec--CC-ceeEEEEe---
Q 013625 155 ----D---------GTSLYAKLVVGADGGKSRVRELA----GFKTTGWSYS-QNAIICTVEHNK--EN-YCAWQRFL--- 210 (439)
Q Consensus 155 ----d---------g~~~~adlvVgADG~~S~vR~~l----~~~~~~~~~~-~~~~~~~~~~~~--~~-~~~~~~~~--- 210 (439)
| |.+++||+||+|||.+|.||+.+ ++........ ...+...+..+. .. ......+.
T Consensus 187 g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~ 266 (584)
T 2gmh_A 187 GIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL 266 (584)
T ss_dssp EECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTS
T ss_pred cccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccc
Confidence 3 46899999999999999999987 5443211111 112222332222 11 22222221
Q ss_pred ---cCCceEEeecC--CCceEEEEEcCccChhHhhCCCHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccc
Q 013625 211 ---PAGPIALLPIG--DNFSNIVWTMNPKDASDCKSMNEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSA 285 (439)
Q Consensus 211 ---~~g~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (439)
..+..+++|.. ++..+++|......... ..++. +.+..... ++ .+..++...
T Consensus 267 ~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~--~~~~~---~~l~~~~~---~p-----------~i~~~l~~~---- 323 (584)
T 2gmh_A 267 DRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNP--YLSPF---REFQRWKH---HP-----------SIKPTLEGG---- 323 (584)
T ss_dssp CTTSCEEEEEEECCSSSCEEEEEEEEETTCCCT--TCCHH---HHHHHHTT---ST-----------TTHHHHTTC----
T ss_pred cCCcCCceEEEEecCCCCeEEEEEEEecCcccc--cCChH---HHHHHHHh---Ch-----------HHHHHhCCC----
Confidence 12335677887 67888888765433211 11221 12222110 00 111111100
Q ss_pred cccccCCcceeeecccceeeecccccccccccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCC-CCCh
Q 013625 286 KECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGA-DIGE 364 (439)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~-~~~~ 364 (439)
+... ......++.....+++|..+|++|||||||.++|+.|||+|+||+||..||++|..+++.++ +.
T Consensus 324 --------~~~~-~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~-- 392 (584)
T 2gmh_A 324 --------KRIA-YGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQS-- 392 (584)
T ss_dssp --------EEEE-EEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCC--
T ss_pred --------eEEE-ecceEccCCCcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcch--
Confidence 0110 01111234444456889999999999999999999999999999999999999999876442 21
Q ss_pred HHH---HHHHHHhhchh-hHHHHHHHHHHHHhhcC
Q 013625 365 ASL---LKKYEAERKPA-NIVMMAVLDGFQKAYSV 395 (439)
Q Consensus 365 ~~~---l~~Ye~~r~~~-~~~~~~~~~~~~~~~~~ 395 (439)
..+ |+.|+++|+++ +.+.+..++.+..+++.
T Consensus 393 ~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~~ 427 (584)
T 2gmh_A 393 KTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHG 427 (584)
T ss_dssp SSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGGS
T ss_pred hhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHHH
Confidence 343 89999999998 67777777777776643
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.94 E-value=1.3e-24 Score=222.32 Aligned_cols=310 Identities=12% Similarity=0.129 Sum_probs=200.8
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHH-HHHHCCCchh--hhhhhcCccceEEE--EeCC--------
Q 013625 5 KHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATIS-FFKEIGAWQY--VQQHRHAYFDKMQV--WDYT-------- 71 (439)
Q Consensus 5 ~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~-~L~~lGl~~~--l~~~~~~~~~~~~~--~~~~-------- 71 (439)
+|++|+|||+.+.++ ...|.++.|++.+ +|+.+|+.+. +.+.+.....++.+ |+..
T Consensus 50 ~G~~V~liE~~~~~~-----------~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~ 118 (550)
T 2e4g_A 50 GTADITLLQAPDIPT-----------LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAIKFINWRTAGEGTSEAR 118 (550)
T ss_dssp TSSEEEEEECCCCCC-----------CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEEEEESSSSCCCCCSSCC
T ss_pred CCCcEEEEeCCCCCc-----------cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEeeeEeecccccccccccc
Confidence 799999999977652 2237899999999 9999999876 55433311123322 2211
Q ss_pred -----Ccce-eEEe------------------------------------ccCCC----------CccceeeeehHHHHH
Q 013625 72 -----GLGY-TKYN------------------------------------ARDVN----------KEILGCVVENKVLHS 99 (439)
Q Consensus 72 -----~~~~-~~~~------------------------------------~~~~~----------~~~~~~~i~R~~l~~ 99 (439)
+... ..+. ..+.. ...+++.++|..|.+
T Consensus 119 l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (550)
T 2e4g_A 119 ELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGSKVTNYAWHFDAHLVAD 198 (550)
T ss_dssp EETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSCBCSCCEEEECHHHHHH
T ss_pred cccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCCCCCCcceEEcHHHHHH
Confidence 0000 0000 00000 134568899999999
Q ss_pred HHHHHhhcC-CCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh-hhh
Q 013625 100 SLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV-REL 177 (439)
Q Consensus 100 ~L~~~~~~~-~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v-R~~ 177 (439)
.|.+.+.+. | ++|+++ +|+++.. ++ ++..+.|.+++|+++.||+||+|||.+|.+ ++.
T Consensus 199 ~L~~~~~~~~G-v~i~~~-~V~~i~~-----------~~-------~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~ 258 (550)
T 2e4g_A 199 FLRRFATEKLG-VRHVED-RVEHVQR-----------DA-------NGNIESVRTATGRVFDADLFVDCSGFRGLLINKA 258 (550)
T ss_dssp HHHHHHHHHSC-CEEEEC-CEEEEEE-----------CT-------TSCEEEEEETTSCEEECSEEEECCGGGCCCCCCC
T ss_pred HHHHHHHhcCC-cEEEEC-eEeEEEE-----------cC-------CCCEEEEEECCCCEEECCEEEECCCCchhhHHHH
Confidence 999999988 6 999999 9999976 00 123477888999999999999999999999 556
Q ss_pred hCCCCCCCc---CCCeEEEEEEEeec----CCceeEEEEecCCceEEeecCCCceEEEEEcCccChhHhhCCCHHHHHHH
Q 013625 178 AGFKTTGWS---YSQNAIICTVEHNK----ENYCAWQRFLPAGPIALLPIGDNFSNIVWTMNPKDASDCKSMNEDDFVKI 250 (439)
Q Consensus 178 l~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (439)
++....... .....+...+.... ..........+.++++++|+.+. ..+.+..... ..+.++..+.
T Consensus 259 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~~~------~~~~~~~~~~ 331 (550)
T 2e4g_A 259 MEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVYSSR------FATEDEAVRE 331 (550)
T ss_dssp TCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEECTT------TSCHHHHHHH
T ss_pred hCCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEEecC------CCChHHHHHH
Confidence 665532211 12223333333221 11222233457788899998773 3333333221 1244555666
Q ss_pred HHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccccccccccCCEEEEccccccc
Q 013625 251 LNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHANNYVSKRVVLIGDAAHTV 330 (439)
Q Consensus 251 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvvLvGDAAh~~ 330 (439)
+...+. .. +. + .....+++.....++|..+|++|||||||.+
T Consensus 332 l~~~~~-~~-p~--------------------------------l----~~~~~i~~~~~~~~~~~~~rvvliGDAAh~~ 373 (550)
T 2e4g_A 332 FCEMWH-LD-PE--------------------------------T----QPLNRIRFRVGRNRRAWVGNCVSIGTSSCFV 373 (550)
T ss_dssp HHHHTT-CC-TT--------------------------------T----SCCEEEECCCEEESCSEETTEEECSTTTEEC
T ss_pred HHHhhC-cC-cc--------------------------------c----CCCceEEecCCCccccccCCEEEEehhhccc
Confidence 665442 00 00 0 0001123333335666789999999999999
Q ss_pred CCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhchhhHHHHHHHHHHHHhhcCC
Q 013625 331 HPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERKPANIVMMAVLDGFQKAYSVD 396 (439)
Q Consensus 331 ~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~~~~~~~~~~~~~~~~~~~~~ 396 (439)
+|+.|||+|+|++||..|+++|.. +.. .+.+|+.|+++|++++..+.++......+-...
T Consensus 374 ~P~~GqGi~~a~~da~~La~~L~~----~~~--~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~~~r~ 433 (550)
T 2e4g_A 374 EPLESTGIYFVYAALYQLVKHFPD----KSL--NPVLTARFNREIETMFDDTRDFIQAHFYFSPRT 433 (550)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTCCC----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CccchhhHHHHHHHHHHHHHhccc----cCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999988753 222 378999999999999999999888877765443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.89 E-value=1.7e-22 Score=200.40 Aligned_cols=350 Identities=11% Similarity=0.023 Sum_probs=199.7
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
.+|++|+|||+++.+.... .....+..+.+.++..++.+|+.. ..... .++.++.++..+.. ...+...
T Consensus 43 ~~G~~V~viE~~~~~~~~~------g~~~~~~~~~~~~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~-~~~~~~~-- 111 (430)
T 3ihm_A 43 QHDVDVTVYTDRKPDEYSG------LRLLNTVAHNAVTVQREVALDVNE-WPSEE-FGYFGHYYYVGGPQ-PMRFYGD-- 111 (430)
T ss_dssp HTTCEEEEEESCCGGGSTT------SCCCCCCCBCHHHHHHHHHTTCCC-SCHHH-HCEEEEEEEECSSS-CEEEEEE--
T ss_pred HCCCeEEEEcCCChHhhcc------cccccchhccchhhhhhhhcChhh-hhhhc-ccccceeEEECCCC-ccccchh--
Confidence 4699999999998542110 111123456778899999997621 11112 24566666554432 3333211
Q ss_pred CCccceeeeehHHHHHHHHHHhhcCCCcEEEcCC-eeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEec
Q 013625 84 NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPS-RLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAK 162 (439)
Q Consensus 84 ~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~-~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~ad 162 (439)
....++.+++..+...|.+.+.+.| +++++.. .+.+++. ....+|
T Consensus 112 -~~~~~~~v~~~~l~~~L~~~~~~~G-v~v~~~~v~~~~l~~--------------------------------~~~~ad 157 (430)
T 3ihm_A 112 -LKAPSRAVDYRLYQPMLMRALEARG-GKFCYDAVSAEDLEG--------------------------------LSEQYD 157 (430)
T ss_dssp -EEEEEBEECHHHHHHHHHHHHHHTT-CEEEECCCCGGGHHH--------------------------------HHTTSS
T ss_pred -cCCcceeecHHHHHHHHHHHHHHcC-CEEEEEecchhhhhh--------------------------------hcccCC
Confidence 1335678999999999999999887 8888732 1222211 012489
Q ss_pred EEEEecCCCchhhhhhCC-CCCCCcCCC-eEEEEEEEe-ec--CCceeEEEEecCCceEEeecC--CCce--EEEEEcCc
Q 013625 163 LVVGADGGKSRVRELAGF-KTTGWSYSQ-NAIICTVEH-NK--ENYCAWQRFLPAGPIALLPIG--DNFS--NIVWTMNP 233 (439)
Q Consensus 163 lvVgADG~~S~vR~~l~~-~~~~~~~~~-~~~~~~~~~-~~--~~~~~~~~~~~~g~~~~~p~~--~~~~--~~~~~~~~ 233 (439)
+||+|||.+|.+|..... ......... ......+.. .. .....+..+...|.++++|.. ++.. .++|..+.
T Consensus 158 ~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~~ 237 (430)
T 3ihm_A 158 LLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHIG 237 (430)
T ss_dssp EEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECTT
T ss_pred EEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccCCCcceEEEEEEecCC
Confidence 999999999999743311 111222221 222222221 11 123344555566778888852 2222 33445444
Q ss_pred cChhHhhCC----CHHHHHHHHHHhccCCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeeccc
Q 013625 234 KDASDCKSM----NEDDFVKILNHALDYGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSL 309 (439)
Q Consensus 234 ~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (439)
.....+... +++++.+.+.+.+. .|.+. +...+....+. ..+.+..+. ....||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~~~~---~~d~~~~~~----~~~~~~~~~ 298 (430)
T 3ihm_A 238 SDLEVLAHTKYDDDPRAFLDLMLEKLG-KHHPS-----------VAERIDPAEFD---LANSSLDIL----QGGVVPAFR 298 (430)
T ss_dssp SSSGGGGTSCTTTCHHHHHHHHHHHHH-HHCHH-----------HHTTBCTTTCE---ESSSTTSEE----EECCCCEEB
T ss_pred CcHHHhccccCCCCHHHHHHHHHHHHH-HhCcc-----------HHHHHhhchhc---cccCcccee----ecceeeccc
Confidence 333333333 66766666665443 11111 00111100000 000000000 001345445
Q ss_pred ccccccccCCEEE-EcccccccCCcccccchhcHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHhhc-hhhHHHHHHHH
Q 013625 310 KHANNYVSKRVVL-IGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVGADIGEASLLKKYEAERK-PANIVMMAVLD 387 (439)
Q Consensus 310 ~~~~~~~~~rvvL-vGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~~~~~~~~~l~~Ye~~r~-~~~~~~~~~~~ 387 (439)
....+|..||++| +|||||.++|+.|||+|+||+||..|+++|... + +. ..+|..|+.+|+ .+...+...++
T Consensus 299 ~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~-~~--~~~~~~~~~~r~~~~~~~~~~~~~ 372 (430)
T 3ihm_A 299 DGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---S-VY--DLRFSEHLERRRQDRVLCATRWTN 372 (430)
T ss_dssp CSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---S-CC--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---C-CH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5578899999998 999999999999999999999999999999985 2 33 689999999998 55666655555
Q ss_pred HHHHhhcCCCChHHHHHHHHHHhhccChhHHHHHHHHHhc
Q 013625 388 GFQKAYSVDFGPLNILRAAAFHGAQYISPLKRNIISYASG 427 (439)
Q Consensus 388 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l~~~~~~~~~g 427 (439)
.+..-+....+ ....+++.+...|.+.+.+...++.
T Consensus 373 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (430)
T 3ihm_A 373 FTLSALSALPP----EFLAFLQILSQSREMADEFTDNFNY 408 (430)
T ss_dssp HHHHHHHHCCH----HHHHHHHHHHHCHHHHHHHHHGGGC
T ss_pred HHhCCCCCCcH----HHHHHHHHHhhCHHHHHHHHHhCCC
Confidence 54322111111 1233566677888888888877653
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.75 E-value=1.4e-17 Score=167.87 Aligned_cols=294 Identities=17% Similarity=0.158 Sum_probs=164.7
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCC
Q 013625 4 TKHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDV 83 (439)
Q Consensus 4 ~~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (439)
..|++|+|||+.+... ..+...+.|++++.|+.+|+++.... +.
T Consensus 113 ~~G~~V~liEk~~~~g-----------~~~~~~~~~~~~~~l~~~g~~~~~~~-----~~-------------------- 156 (497)
T 2bry_A 113 LLGARVVLVEKRIKFS-----------RHNVLHLWPFTIHDLRALGAKKFYGR-----FC-------------------- 156 (497)
T ss_dssp HTTCEEEEEESCSSCC-----------CCCEEECCHHHHHHHHTTTHHHHCTT-----TT--------------------
T ss_pred HCCCeEEEEEeccccC-----------CCCcccCChhHHHHHHHcCCcccccc-----cc--------------------
Confidence 3689999999998752 12467889999999999998643211 00
Q ss_pred CCccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe--C-CC--cE
Q 013625 84 NKEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL--S-DG--TS 158 (439)
Q Consensus 84 ~~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~-dg--~~ 158 (439)
.. ....+++..|.+.|.+.+.+.+ ++|+++++|++++. ++. ++..+.|.+ . +| .+
T Consensus 157 -~~-~~~~~~~~~l~~~L~~~~~~~g-v~v~~~~~v~~i~~---------~~~--------~~~~~~v~~~~~~~g~~~~ 216 (497)
T 2bry_A 157 -TG-TLDHISIRQLQLLLLKVALLLG-VEIHWGVKFTGLQP---------PPR--------KGSGWRAQLQPNPPAQLAS 216 (497)
T ss_dssp -CT-TCCEEEHHHHHHHHHHHHHHTT-CEEEESCEEEEEEC---------CCS--------TTCCBEEEEESCCCHHHHT
T ss_pred -cc-ccccCCHHHHHHHHHHHHHhCC-CEEEeCCEEEEEEE---------ecC--------CCCEEEEEEEECCCCCEEE
Confidence 00 0135788999999999999876 99999999999976 100 124566666 4 66 58
Q ss_pred EEecEEEEecCCCchhhhhhCCCCCCCcCCCeEEEEEEEe---e--c--CC-ceeEE---EEec-----CC-ce-EEeec
Q 013625 159 LYAKLVVGADGGKSRVRELAGFKTTGWSYSQNAIICTVEH---N--K--EN-YCAWQ---RFLP-----AG-PI-ALLPI 220 (439)
Q Consensus 159 ~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~---~--~--~~-~~~~~---~~~~-----~g-~~-~~~p~ 220 (439)
+.||+||+|||.+|.+|+..+....+... .......+.. . . +. ...+. .+++ .| .. .+.|.
T Consensus 217 i~ad~VV~A~G~~S~~r~~~~~~~~g~~~-~~~~~~l~~~~~~~~~~~~~~~G~~~~~~~~~f~~~~~~~Gi~~~~~~~~ 295 (497)
T 2bry_A 217 YEFDVLISAAGGKFVPEGFTIREMRGKLA-IGITANFVNGRTVEETQVPEISGVARIYNQKFFQSLLKATGIDLENIVYY 295 (497)
T ss_dssp CCBSEEEECCCTTCCCTTCEEEEEECSCC-EEEEEEEECCCCHHHHTSCCBCC----CCSSHHHHHHHHHCCCEEEEEEE
T ss_pred EEcCEEEECCCCCcccccccchhhcCcee-EeeeeeeeeeccccccchhhcCceEEecChhhhHhHHhhcCCCccccccc
Confidence 99999999999999999876554433221 1111122222 0 0 00 11110 0000 11 11 13333
Q ss_pred CCCceEEEEEcC-------------ccChhHhh---CCCHHHHHHHHH--HhccCCCCCCCCCCCCCcccchhccccCcc
Q 013625 221 GDNFSNIVWTMN-------------PKDASDCK---SMNEDDFVKILN--HALDYGYGPHPKSISSGSVDMFSWFRGDAT 282 (439)
Q Consensus 221 ~~~~~~~~~~~~-------------~~~~~~~~---~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (439)
+++...++.... ........ ..+.+++...-. ..|..... ...++.....
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-- 363 (497)
T 2bry_A 296 KDETHYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADFATHGK----------LGKLEFAQDA-- 363 (497)
T ss_dssp ESSEEEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHHHTTTT----------TCSCCBCBCT--
T ss_pred CCCeEEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhccccccchhhc----------cccchhhhhc--
Confidence 333222211111 00000000 112223221110 11110000 0001100000
Q ss_pred ccccccccCCcce-eeecccceeeecccccccccccCC-EEEEccccc-ccCCcccccchhcHHHHHHHHHHHHHhhhcC
Q 013625 283 LSAKECFEVPPRV-VKLASERMVFPLSLKHANNYVSKR-VVLIGDAAH-TVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 359 (439)
Q Consensus 283 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r-vvLvGDAAh-~~~P~~g~G~~~al~da~~La~~L~~~~~~~ 359 (439)
+.. +.+ .........|++..+.+++|.+|| ++|+||||| .+.| .|||+|++|+||..|+++|...++ +
T Consensus 364 ------~g~-~~~~~~~~~~~~~~~~~~r~a~~~~~gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~l~~~l~~~~~-g 434 (497)
T 2bry_A 364 ------RGR-PDVAAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPFWP-LGTGVARGFLAAFDAAWMVKRWAE-G 434 (497)
T ss_dssp ------TSS-BCEEEEECSEEEEESCSEEEEEETTEEEEEEECGGGTBCCCGG-GCCHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred ------cCC-CCCceeeeEEEEecchhhHHHHhcCCcccceEeccccccCcCc-cccchhhHHHHHHHHHHHHHHHhC-C
Confidence 000 011 101233556888889999999998 999999999 4555 999999999999999999999854 3
Q ss_pred CCCChHHHHHHHHHhhchhhHH
Q 013625 360 ADIGEASLLKKYEAERKPANIV 381 (439)
Q Consensus 360 ~~~~~~~~l~~Ye~~r~~~~~~ 381 (439)
. ...++| .+|++.+..
T Consensus 435 ~--~~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 435 A--GPLEVL----AERESLYQL 450 (497)
T ss_dssp C--CHHHHH----HHHHHHHTT
T ss_pred C--Cccchh----hhHHHHhhh
Confidence 2 235555 666665543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.53 E-value=1.1e-12 Score=125.19 Aligned_cols=194 Identities=12% Similarity=0.047 Sum_probs=119.8
Q ss_pred cEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEE-ecEEEEecCCCchhhhhhCCC-----CCC
Q 013625 111 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLY-AKLVVGADGGKSRVRELAGFK-----TTG 184 (439)
Q Consensus 111 v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~-adlvVgADG~~S~vR~~l~~~-----~~~ 184 (439)
++|+++++|++++. ++++++|++++|+... +|+||+|||.+|.+|...... ...
T Consensus 120 ~~i~~~~~v~~i~~--------------------~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~ 179 (336)
T 1yvv_A 120 MPVSFSCRITEVFR--------------------GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAG 179 (336)
T ss_dssp CCEECSCCEEEEEE--------------------CSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTT
T ss_pred CcEEecCEEEEEEE--------------------eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhh
Confidence 89999999999987 4567999999998764 999999999999998653221 112
Q ss_pred CcCCCeEEEEEEEeecCC-ceeEEEEecCCceEEe------ecCCCc-eEEEEEcCccChhHhhCCCHHHHHHHHHHhcc
Q 013625 185 WSYSQNAIICTVEHNKEN-YCAWQRFLPAGPIALL------PIGDNF-SNIVWTMNPKDASDCKSMNEDDFVKILNHALD 256 (439)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~------p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 256 (439)
..|. ..+...+..+.+. ......+.+.+...++ |...+. ..++|.............+++++.+.+.+.+.
T Consensus 180 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (336)
T 1yvv_A 180 VKMD-PTWAVALAFETPLQTPMQGCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFA 258 (336)
T ss_dssp CCEE-EEEEEEEEESSCCSCCCCEEEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred cCcc-ceeEEEEEecCCCCCCCCeEEeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2222 2333333333322 2222334556665554 433343 56788776544445556788888888887665
Q ss_pred CCCCCCCCCCCCCcccchhccccCccccccccccCCcceeeecccceeeecccccc-ccc-ccCCEEEEcccccccCCcc
Q 013625 257 YGYGPHPKSISSGSVDMFSWFRGDATLSAKECFEVPPRVVKLASERMVFPLSLKHA-NNY-VSKRVVLIGDAAHTVHPLA 334 (439)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~rvvLvGDAAh~~~P~~ 334 (439)
.-++.... .+.......+...+|.+.... ..| ..+|++|+|||+|.
T Consensus 259 ~~lg~~~~---------------------------~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g----- 306 (336)
T 1yvv_A 259 ELIDCTMP---------------------------APVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS----- 306 (336)
T ss_dssp TTCSSCCC---------------------------CCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT-----
T ss_pred HHhCCCCC---------------------------CCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC-----
Confidence 33332100 011111222222233332221 112 24899999999974
Q ss_pred cccchhcHHHHHHHHHHHHHhhhc
Q 013625 335 GQGVNLGFGDASTLSRIIAEGIAV 358 (439)
Q Consensus 335 g~G~~~al~da~~La~~L~~~~~~ 358 (439)
.|++.|+.||..||+.|.+.+..
T Consensus 307 -~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 307 -GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp -SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred -CCHHHHHHHHHHHHHHHHHHhhh
Confidence 49999999999999999998754
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.50 E-value=8.2e-07 Score=85.81 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=59.2
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecC
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 169 (439)
..++...+.+.|.+.+.+.| ++|+++++|++++. +++.+.|.+++| ++.||.||.|+|
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g-~~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~a~~vV~A~G 216 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLG-AEIFEHTPVLHVER--------------------DGEALFIKTPSG-DVWANHVVVASG 216 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTT-CEEETTCCCCEEEC--------------------SSSSEEEEETTE-EEEEEEEEECCG
T ss_pred eEEcHHHHHHHHHHHHHHCC-CEEEcCCcEEEEEE--------------------ECCEEEEEcCCc-eEEcCEEEECCC
Confidence 45677899999999999887 99999999999986 345567888877 899999999999
Q ss_pred CCch-hhhhhCCC
Q 013625 170 GKSR-VRELAGFK 181 (439)
Q Consensus 170 ~~S~-vR~~l~~~ 181 (439)
.+|. +.+.++..
T Consensus 217 ~~s~~l~~~~~~~ 229 (382)
T 1ryi_A 217 VWSGMFFKQLGLN 229 (382)
T ss_dssp GGTHHHHHHTTCC
T ss_pred hhHHHHHHhcCCC
Confidence 9987 77777654
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.35 E-value=1.1e-05 Score=78.56 Aligned_cols=116 Identities=12% Similarity=0.050 Sum_probs=75.1
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
.++-..+.+.|.+.+.+.| ++|+++++|+++.. +.+..+.|.+.+| ++.||.||.|+|.
T Consensus 170 ~~~~~~~~~~l~~~~~~~g-~~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g-~~~a~~vV~a~G~ 228 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMG-VDIIQNCEVTGFIK-------------------DGEKVTGVKTTRG-TIHAGKVALAGAG 228 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------SSSBEEEEEETTC-CEEEEEEEECCGG
T ss_pred cCCHHHHHHHHHHHHHHCC-CEEEcCCeEEEEEE-------------------eCCEEEEEEeCCc-eEECCEEEECCch
Confidence 3556689999999999887 99999999999987 0123456788888 7999999999999
Q ss_pred Cc-hhhhhhCCCCCCCcCCCeEEEEEEEeecCCceeEEEEecCCceEEeecCCCceEEEEE
Q 013625 171 KS-RVRELAGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPAGPIALLPIGDNFSNIVWT 230 (439)
Q Consensus 171 ~S-~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~ 230 (439)
+| .+++.++.......+....+... +........ .+.....+++.|..++...+...
T Consensus 229 ~s~~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~y~~p~~~g~~~ig~~ 286 (405)
T 2gag_B 229 HSSVLAEMAGFELPIQSHPLQALVSE-LFEPVHPTV--VMSNHIHVYVSQAHKGELVMGAG 286 (405)
T ss_dssp GHHHHHHHHTCCCCEEEEEEEEEEEE-EBCSCCCSE--EEETTTTEEEEECTTSEEEEEEE
T ss_pred hHHHHHHHcCCCCCccccceeEEEec-CCccccCce--EEeCCCcEEEEEcCCCcEEEEec
Confidence 98 68888876543222211111111 111111111 12344667778877666555444
No 33
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.32 E-value=3.6e-06 Score=87.83 Aligned_cols=63 Identities=17% Similarity=0.155 Sum_probs=56.5
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecC
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 169 (439)
..++...+...|.+.+.+.| ++|+++++|++++. +++++.|.+.+|.++.||.||.|+|
T Consensus 412 g~v~p~~l~~aL~~~a~~~G-v~i~~~t~V~~l~~--------------------~~~~v~V~t~~G~~i~Ad~VVlAtG 470 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQG-LQIYYQYQLQNFSR--------------------KDDCWLLNFAGDQQATHSVVVLANG 470 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECCG
T ss_pred eeeCHHHHHHHHHHHHHhCC-CEEEeCCeeeEEEE--------------------eCCeEEEEECCCCEEECCEEEECCC
Confidence 45778899999999999987 99999999999987 4567899999988999999999999
Q ss_pred CCch
Q 013625 170 GKSR 173 (439)
Q Consensus 170 ~~S~ 173 (439)
.+|.
T Consensus 471 ~~s~ 474 (676)
T 3ps9_A 471 HQIS 474 (676)
T ss_dssp GGGG
T ss_pred cchh
Confidence 9986
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.21 E-value=1.6e-05 Score=76.58 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=58.2
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeE-EEeCCCcEEEecEEEEecC
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~dg~~~~adlvVgADG 169 (439)
.++...+.+.|.+.+.+.| ++|+++++|++++. +++.+. |.+.+| ++.||.||.|+|
T Consensus 145 ~~~~~~l~~~l~~~~~~~G-v~i~~~~~v~~i~~--------------------~~~~v~gv~~~~g-~i~a~~VV~A~G 202 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYG-AKLLEYTEVKGFLI--------------------ENNEIKGVKTNKG-IIKTGIVVNATN 202 (382)
T ss_dssp EECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------SSSBEEEEEETTE-EEECSEEEECCG
T ss_pred eECHHHHHHHHHHHHHHCC-CEEECCceEEEEEE--------------------ECCEEEEEEECCc-EEECCEEEECcc
Confidence 4778899999999999887 99999999999987 335566 888887 899999999999
Q ss_pred CCc-hhhhhhCCC
Q 013625 170 GKS-RVRELAGFK 181 (439)
Q Consensus 170 ~~S-~vR~~l~~~ 181 (439)
.+| .+.+.++..
T Consensus 203 ~~s~~l~~~~g~~ 215 (382)
T 1y56_B 203 AWANLINAMAGIK 215 (382)
T ss_dssp GGHHHHHHHHTCC
T ss_pred hhHHHHHHHcCCC
Confidence 999 567777654
No 35
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.14 E-value=1.4e-05 Score=76.89 Aligned_cols=70 Identities=17% Similarity=0.266 Sum_probs=60.0
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecC
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 169 (439)
..++...+.+.|.+.+++.| ++|+++++|++++. +++.+.|++++| ++.||.||.|+|
T Consensus 149 ~~~~~~~~~~~l~~~a~~~G-v~i~~~~~V~~i~~--------------------~~~~~~V~t~~g-~i~a~~VV~A~G 206 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQ-GQVLCNHEALEIRR--------------------VDGAWEVRCDAG-SYRAAVLVNAAG 206 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEESSCCCCEEEE--------------------ETTEEEEECSSE-EEEESEEEECCG
T ss_pred ceECHHHHHHHHHHHHHHCC-CEEEcCCEEEEEEE--------------------eCCeEEEEeCCC-EEEcCEEEECCC
Confidence 45778899999999999997 99999999999987 445688988888 899999999999
Q ss_pred CCc-hhhhhhCCC
Q 013625 170 GKS-RVRELAGFK 181 (439)
Q Consensus 170 ~~S-~vR~~l~~~ 181 (439)
.+| .+.+.++..
T Consensus 207 ~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 207 AWCDAIAGLAGVR 219 (381)
T ss_dssp GGHHHHHHHHTCC
T ss_pred hhHHHHHHHhCCC
Confidence 998 466777654
No 36
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.99 E-value=1.1e-05 Score=81.32 Aligned_cols=69 Identities=14% Similarity=0.255 Sum_probs=56.2
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC-ceeEEEeCCCcEEEecEEEEecCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG-HLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
.....+.+.|.+.+.+.| ++|+++++|+++.. ++ ....|.+.+|+++.||+||.|||.
T Consensus 217 ~~~~~l~~~L~~~l~~~G-v~I~~~t~V~~I~~--------------------~~~~v~gV~l~~G~~i~Ad~VVlA~G~ 275 (549)
T 3nlc_A 217 FKLVTMIEKMRATIIELG-GEIRFSTRVDDLHM--------------------EDGQITGVTLSNGEEIKSRHVVLAVGH 275 (549)
T ss_dssp HHHHHHHHHHHHHHHHTT-CEEESSCCEEEEEE--------------------SSSBEEEEEETTSCEEECSCEEECCCT
T ss_pred chHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEE--------------------eCCEEEEEEECCCCEEECCEEEECCCC
Confidence 355788888999998886 99999999999987 22 345588999999999999999999
Q ss_pred Cch----hhhhhCCC
Q 013625 171 KSR----VRELAGFK 181 (439)
Q Consensus 171 ~S~----vR~~l~~~ 181 (439)
+|. ..+.+|..
T Consensus 276 ~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 276 SARDTFEMLHERGVY 290 (549)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred ChhhHHHHHHHcCCC
Confidence 995 44455555
No 37
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.96 E-value=0.00045 Score=69.18 Aligned_cols=114 Identities=16% Similarity=0.050 Sum_probs=72.0
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe---CCCc--EEEecEEE
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGT--SLYAKLVV 165 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~--~~~adlvV 165 (439)
.++...|...|.+.+.+.| ++|+++++|+++.. ++..+.|.+ .+|+ ++.||.||
T Consensus 145 ~v~~~~l~~~l~~~a~~~G-v~i~~~~~V~~l~~--------------------~~~~~~V~~~d~~~G~~~~i~A~~VV 203 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKG-GEVLTRTRATSARR--------------------ENGLWIVEAEDIDTGKKYSWQARGLV 203 (501)
T ss_dssp EECHHHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------ETTEEEEEEEETTTCCEEEEEESCEE
T ss_pred EEcHHHHHHHHHHHHHHcC-CEEEcCcEEEEEEE--------------------eCCEEEEEEEECCCCCEEEEECCEEE
Confidence 4788999999999999987 99999999999987 335556666 3675 89999999
Q ss_pred EecCCCch-hhhh-hCCCCCCCcCCCeEEEEEEEeecCCceeEEEEecC-CceEEeecCCCce
Q 013625 166 GADGGKSR-VREL-AGFKTTGWSYSQNAIICTVEHNKENYCAWQRFLPA-GPIALLPIGDNFS 225 (439)
Q Consensus 166 gADG~~S~-vR~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~p~~~~~~ 225 (439)
.|+|.+|. +++. ++......-.........++...+.......-.++ +.++++|..++..
T Consensus 204 ~AtG~~s~~l~~~~l~~~~~~~i~p~rG~~~~~~~~~~~~~~~~~~~~dg~~~~~~P~~~g~~ 266 (501)
T 2qcu_A 204 NATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFS 266 (501)
T ss_dssp ECCGGGHHHHHHHHTCCCCSSCBCCEEEEEEEEECSSSCSCEEEEECTTSCEEEEEEETTTEE
T ss_pred ECCChhHHHHHHHhccCCcccccccceeEEEEECCCCCCceEEEeecCCCCEEEEEEcCCCcE
Confidence 99999996 4554 54321111122222233333222222221111233 3467788876543
No 38
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.95 E-value=9.3e-05 Score=71.37 Aligned_cols=68 Identities=12% Similarity=0.120 Sum_probs=56.0
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecC
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 169 (439)
..++...+.+.|.+.+.+.| ++|+++++|++++. +++++.|.+.+| ++.||.||.|+|
T Consensus 145 ~~~~~~~~~~~l~~~~~~~G-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~a~~vV~A~G 202 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARG-AKVLTHTRVEDFDI--------------------SPDSVKIETANG-SYTADKLIVSMG 202 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSCEEEEETTE-EEEEEEEEECCG
T ss_pred cEEeHHHHHHHHHHHHHHCC-CEEEcCcEEEEEEe--------------------cCCeEEEEeCCC-EEEeCEEEEecC
Confidence 34677899999999999987 99999999999987 345577888776 799999999999
Q ss_pred CCch-hhhhhC
Q 013625 170 GKSR-VRELAG 179 (439)
Q Consensus 170 ~~S~-vR~~l~ 179 (439)
.+|. +.+.++
T Consensus 203 ~~~~~l~~~~g 213 (389)
T 2gf3_A 203 AWNSKLLSKLN 213 (389)
T ss_dssp GGHHHHGGGGT
T ss_pred ccHHHHhhhhc
Confidence 9875 445554
No 39
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.90 E-value=0.0004 Score=67.18 Aligned_cols=68 Identities=16% Similarity=0.098 Sum_probs=57.1
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
.++...+.+.|.+.+.+.| ++|+++++|++++. +++.+.|...+| +++||.||.|+|.
T Consensus 149 ~~~~~~~~~~l~~~a~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~t~~g-~i~a~~VV~A~G~ 206 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAG-ATLRAGETVTELVP--------------------DADGVSVTTDRG-TYRAGKVVLACGP 206 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------ETTEEEEEESSC-EEEEEEEEECCGG
T ss_pred EEcHHHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------cCCeEEEEECCC-EEEcCEEEEcCCc
Confidence 5677889999999998887 99999999999987 445688877666 7999999999999
Q ss_pred C-chhhhhhCC
Q 013625 171 K-SRVRELAGF 180 (439)
Q Consensus 171 ~-S~vR~~l~~ 180 (439)
+ +.+++.++.
T Consensus 207 ~s~~l~~~~g~ 217 (397)
T 2oln_A 207 YTNDLLEPLGA 217 (397)
T ss_dssp GHHHHHGGGTC
T ss_pred ChHHHhhhcCC
Confidence 8 567777765
No 40
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.86 E-value=0.0001 Score=68.03 Aligned_cols=66 Identities=15% Similarity=0.166 Sum_probs=49.9
Q ss_pred ehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc---eeEEEe-----C--CC-----c
Q 013625 93 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH---LAKLDL-----S--DG-----T 157 (439)
Q Consensus 93 ~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~v~v~~-----~--dg-----~ 157 (439)
++..+...|.+.+.+..+++++++++|+++.. +++ ++.+.. . +| .
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~--------------------~~~~v~gv~~~~~~~~~~~~~g~~g~~~ 176 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIV--------------------KGNRVGGVVTNWALVAQNHHTQSCMDPN 176 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEE--------------------ETTEEEEEEEEEHHHHTCTTTSSCCCCE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEe--------------------cCCeEEEEEEeccccccccCccccCceE
Confidence 66788889999887744499999999999976 223 233321 1 32 5
Q ss_pred EEEecEEEEecCCCchhhhhh
Q 013625 158 SLYAKLVVGADGGKSRVRELA 178 (439)
Q Consensus 158 ~~~adlvVgADG~~S~vR~~l 178 (439)
++.||.||.|+|.+|.++...
T Consensus 177 ~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 177 VMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp EEEEEEEEECCCSSSTTTTHH
T ss_pred EEECCEEEECCCCchHHHHHH
Confidence 799999999999999988654
No 41
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.80 E-value=0.0015 Score=58.75 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=32.9
Q ss_pred ccCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhc
Q 013625 316 VSKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 358 (439)
Q Consensus 316 ~~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 358 (439)
..+||+|+|||+ .|.|++.||.||..+|+.|.+.|+.
T Consensus 293 ~~~~v~l~GDa~------~g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWC------LSGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGG------TTSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeccc------CCcCHHHHHHHHHHHHHHHHHHhhc
Confidence 468999999995 4789999999999999999998863
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.75 E-value=0.0001 Score=76.94 Aligned_cols=63 Identities=14% Similarity=0.082 Sum_probs=54.7
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc-EEEecEEEEec
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-SLYAKLVVGAD 168 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~-~~~adlvVgAD 168 (439)
..++...+.+.|.+.+.+.| ++|+++++|++++. +++++.|.+.+|. ++.||.||.|+
T Consensus 407 g~v~p~~l~~aL~~~a~~~G-v~i~~~t~V~~l~~--------------------~~~~v~V~t~~G~~~i~Ad~VVlAt 465 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNG-MTCHYQHELQRLKR--------------------IDSQWQLTFGQSQAAKHHATVILAT 465 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEEESCCEEEEEE--------------------CSSSEEEEEC-CCCCEEESEEEECC
T ss_pred eEECHHHHHHHHHHHHHhCC-CEEEeCCeEeEEEE--------------------eCCeEEEEeCCCcEEEECCEEEECC
Confidence 44677899999999999987 99999999999987 4456889999987 89999999999
Q ss_pred CCCch
Q 013625 169 GGKSR 173 (439)
Q Consensus 169 G~~S~ 173 (439)
|.+|.
T Consensus 466 G~~s~ 470 (689)
T 3pvc_A 466 GHRLP 470 (689)
T ss_dssp GGGTT
T ss_pred Ccchh
Confidence 99986
No 43
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.74 E-value=0.00012 Score=68.99 Aligned_cols=138 Identities=14% Similarity=0.178 Sum_probs=78.4
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCCC
Q 013625 5 KHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVN 84 (439)
Q Consensus 5 ~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (439)
.|++|+|||+.+.+....+ ..........+.+...+.|+++|+. +.. .+. +
T Consensus 103 ~G~~V~LiEk~~~~GGg~~---~~g~~~~~~~~~~~~~~~L~~~Gv~----------~~~------~G~----~------ 153 (344)
T 3jsk_A 103 PDLRITIVEAGVAPGGGAW---LGGQLFSAMVMRKPADVFLDEVGVP----------YED------EGD----Y------ 153 (344)
T ss_dssp TTSCEEEEESSSSCCTTTT---CCBTTCCCEEEETTTHHHHHHHTCC----------CEE------CSS----E------
T ss_pred CCCEEEEEeCCCccCCccc---cCCccchhhhcchHHHHHHHHcCCc----------ccc------cCC----e------
Confidence 4899999999987632111 0011222344557778888888862 110 010 0
Q ss_pred CccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCc-ccCCCCCcccccccC----ceeEEEe----C-
Q 013625 85 KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSI-SVDSTPSATTLFTKG----HLAKLDL----S- 154 (439)
Q Consensus 85 ~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~-~~~~~~~~~~~~~~~----~~v~v~~----~- 154 (439)
-+..+..++.+.|.+.+.+.++++|+++++|+++..+.+.... +...+... . +.+ .++.+.. .
T Consensus 154 ----~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~--~-~~g~~rV~GVv~~~~~v~~~ 226 (344)
T 3jsk_A 154 ----VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEA--E-DEAKVRIAGVVTNWTLVSMH 226 (344)
T ss_dssp ----EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC-------------------CCEEEEEEEEEEHHHHTT
T ss_pred ----EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccccccc--c-cCCCceEeEEEeeeeeeecc
Confidence 0112457788999999988656999999999999873210000 00000000 0 001 1233321 1
Q ss_pred -------CCcEEEecEEEEecCCCchhhhhh
Q 013625 155 -------DGTSLYAKLVVGADGGKSRVRELA 178 (439)
Q Consensus 155 -------dg~~~~adlvVgADG~~S~vR~~l 178 (439)
++.+++|++||.|+|..|+|++.+
T Consensus 227 g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 227 HDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp SSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred CCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 234799999999999999976554
No 44
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.63 E-value=0.00016 Score=61.71 Aligned_cols=67 Identities=10% Similarity=0.070 Sum_probs=57.8
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+....+.+.|.+.+.+.+ ++++++ +|++++. +++.+.|.+++| ++.+|+||.|+|.+
T Consensus 53 ~~~~~~~~~l~~~~~~~g-v~v~~~-~v~~i~~--------------------~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYG-AEVRPG-VVKGVRD--------------------MGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp CCHHHHHHHHHHHHHHTT-CEEEEC-CCCEEEE--------------------CSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEeC-EEEEEEE--------------------cCCEEEEEECCC-EEEECEEEECCCCC
Confidence 456788999999999887 999999 9999986 345588889888 89999999999999
Q ss_pred chhhhhhCCC
Q 013625 172 SRVRELAGFK 181 (439)
Q Consensus 172 S~vR~~l~~~ 181 (439)
|.+++.+++.
T Consensus 110 ~~~~~~~g~~ 119 (180)
T 2ywl_A 110 PTLPSLLGLT 119 (180)
T ss_dssp CHHHHHHTCC
T ss_pred CCccccCCCC
Confidence 9998888754
No 45
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.62 E-value=0.00072 Score=67.56 Aligned_cols=64 Identities=17% Similarity=0.297 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCcee-EEEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..|-+.|.+.+++.| ++|+++++|++|+. +++.+ .|+++||+++.||.||.+-+..-.
T Consensus 221 ~~l~~aL~~~~~~~G-g~I~~~~~V~~I~~--------------------~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 221 GALVQGMIKLFQDLG-GEVVLNARVSHMET--------------------TGNKIEAVHLEDGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEETTSCEEECSCEEECCC----
T ss_pred cchHHHHHHHHHHhC-CceeeecceeEEEe--------------------eCCeEEEEEecCCcEEEcCEEEECCCHHHH
Confidence 467788889999998 89999999999987 34444 489999999999999987777766
Q ss_pred hhhhhC
Q 013625 174 VRELAG 179 (439)
Q Consensus 174 vR~~l~ 179 (439)
.++.++
T Consensus 280 ~~~Ll~ 285 (501)
T 4dgk_A 280 YRDLLS 285 (501)
T ss_dssp ------
T ss_pred HHHhcc
Confidence 666653
No 46
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.48 E-value=0.00028 Score=71.83 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=52.6
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCccccccc-Cc--eeEEEeCCCc--EEEecEEEE
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GH--LAKLDLSDGT--SLYAKLVVG 166 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~--~v~v~~~dg~--~~~adlvVg 166 (439)
+....+.+.|.+.+.+.+ ++|+++++|+++..+ + +. +|.+...+|+ ++.||.||.
T Consensus 247 ~~~~~l~~~L~~~~~~~g-v~i~~~~~v~~l~~~-------------------~~g~v~Gv~~~~~~g~~~~i~A~~VVl 306 (566)
T 1qo8_A 247 SSGPEIIDTLRKAAKEQG-IDTRLNSRVVKLVVN-------------------DDHSVVGAVVHGKHTGYYMIGAKSVVL 306 (566)
T ss_dssp CHHHHHHHHHHHHHHHTT-CCEECSEEEEEEEEC-------------------TTSBEEEEEEEETTTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcC-CEEEeCCEEEEEEEC-------------------CCCcEEEEEEEeCCCcEEEEEcCEEEE
Confidence 456789999999999887 999999999999870 1 22 2444444775 799999999
Q ss_pred ecCCCchhhhhh
Q 013625 167 ADGGKSRVRELA 178 (439)
Q Consensus 167 ADG~~S~vR~~l 178 (439)
|+|.+|.+|+.+
T Consensus 307 AtGg~s~~~~~~ 318 (566)
T 1qo8_A 307 ATGGYGMNKEMI 318 (566)
T ss_dssp CCCCCTTCHHHH
T ss_pred ecCCcccCHHHH
Confidence 999999876544
No 47
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.40 E-value=0.00033 Score=68.14 Aligned_cols=71 Identities=11% Similarity=0.063 Sum_probs=54.8
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeE---------EeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEE
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLT---------SMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLY 160 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~---------~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~ 160 (439)
..++...|.+.|.+.+.+.| ++|+++++|+ ++.. +++.+.|.+.+| ++.
T Consensus 167 g~v~~~~l~~~L~~~~~~~G-v~i~~~~~v~~~~g~~~~~~i~~--------------------~~~~v~v~~~~g-~i~ 224 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQG-AGLLLNTRAELVPGGVRLHRLTV--------------------TNTHQIVVHETR-QIR 224 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTT-CEEECSCEEEEETTEEEEECBCC---------------------------CBCCE-EEE
T ss_pred EEEcHHHHHHHHHHHHHHCC-CEEEcCCEEEeccccccccceEe--------------------eCCeEEEEECCc-EEE
Confidence 45788899999999999887 9999999999 8865 334566767666 899
Q ss_pred ecEEEEecCCCc-hhhh-hhCCCC
Q 013625 161 AKLVVGADGGKS-RVRE-LAGFKT 182 (439)
Q Consensus 161 adlvVgADG~~S-~vR~-~l~~~~ 182 (439)
||.||.|+|.+| .+++ .++...
T Consensus 225 a~~VV~A~G~~s~~l~~~~~g~~~ 248 (405)
T 3c4n_A 225 AGVIIVAAGAAGPALVEQGLGLHT 248 (405)
T ss_dssp EEEEEECCGGGHHHHHHHHHCCCC
T ss_pred CCEEEECCCccHHHHHHHhcCCCC
Confidence 999999999999 7888 777643
No 48
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.37 E-value=0.00043 Score=68.27 Aligned_cols=68 Identities=24% Similarity=0.239 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce-eEEEeCCCcEEEecEEEEecCCCc
Q 013625 94 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 94 R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~S 172 (439)
...+.+.|.+.+.+.+ ++|+++++|+++.. +++. +.|.+.+|+++.||.||.|+|.+|
T Consensus 133 ~~~l~~~L~~~~~~~G-V~i~~~~~V~~i~~--------------------~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLG-VKIRTNTPVETIEY--------------------ENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCC-CEEEeCcEEEEEEe--------------------cCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 5788899999999886 99999999999986 2344 788889998899999999999999
Q ss_pred -----------hhhhhhCCCC
Q 013625 173 -----------RVRELAGFKT 182 (439)
Q Consensus 173 -----------~vR~~l~~~~ 182 (439)
.+++.+|...
T Consensus 192 ~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 192 VPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp SGGGSCSSHHHHHHHHTTCCE
T ss_pred CCCCCCCcHHHHHHHHCCCCc
Confidence 8888887654
No 49
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.34 E-value=0.00079 Score=68.71 Aligned_cols=70 Identities=11% Similarity=0.106 Sum_probs=56.2
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecC
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 169 (439)
..++|..+.+.|.+.+.+..+++| ++.+|+++.. +++..+.|.+.+|.++.||.||.|+|
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-------------------e~g~V~GV~t~dG~~I~Ad~VVLATG 178 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIV-------------------ENDRVVGAVTQMGLKFRAKAVVLTVG 178 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEE-------------------SSSBEEEEEETTSEEEEEEEEEECCS
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEe-------------------cCCEEEEEEECCCCEEECCEEEEcCC
Confidence 468899999999999988545999 5779999976 02233478888999999999999999
Q ss_pred CCchhhhhhC
Q 013625 170 GKSRVRELAG 179 (439)
Q Consensus 170 ~~S~vR~~l~ 179 (439)
.+|..+...|
T Consensus 179 t~s~~~~i~G 188 (651)
T 3ces_A 179 TFLDGKIHIG 188 (651)
T ss_dssp TTTCCEEECC
T ss_pred CCccCccccC
Confidence 9998776543
No 50
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.33 E-value=0.00043 Score=67.53 Aligned_cols=68 Identities=22% Similarity=0.252 Sum_probs=58.4
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
..+..+.+.|.+.+.+.+ ++|+++++|+++.. +++.+.|.+.+| ++.||.||.|+|.+
T Consensus 129 ~~~~~l~~~L~~~l~~~G-v~i~~~~~V~~i~~--------------------~~~~~~V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAG-VQLRLETSIGEVER--------------------TASGFRVTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp SCHHHHHHHHHHHHHHHT-CEEECSCCEEEEEE--------------------ETTEEEEEETTE-EEEESEEEECCCCS
T ss_pred CCHHHHHHHHHHHHHHCC-CEEEECCEEEEEEE--------------------eCCEEEEEECCc-EEEeeEEEECCCCc
Confidence 456889999999999887 99999999999987 446788999888 89999999999999
Q ss_pred c-----------hhhhhhCCC
Q 013625 172 S-----------RVRELAGFK 181 (439)
Q Consensus 172 S-----------~vR~~l~~~ 181 (439)
| .+.+.+|..
T Consensus 187 S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 187 SIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp SCGGGTCCCHHHHHHHHTTCC
T ss_pred cCCCCCCCcHHHHHHHHCCCC
Confidence 9 566777654
No 51
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.26 E-value=0.011 Score=58.07 Aligned_cols=56 Identities=20% Similarity=0.278 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
.|.+.|.+.+. .++|+++++|++|+. ++++++|++++|+++.||.||.|-......
T Consensus 236 ~l~~~l~~~l~---~~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 236 TLVEEIEKQLK---LTKVYKGTKVTKLSH--------------------SGSCYSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHTCC---SEEEECSCCEEEEEE--------------------CSSSEEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHhcC---CCEEEeCCceEEEEE--------------------cCCeEEEEECCCCEEECCEEEECCCHHHHH
Confidence 45555555543 269999999999987 446699999999999999999999876643
No 52
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.26 E-value=0.003 Score=62.06 Aligned_cols=85 Identities=16% Similarity=0.105 Sum_probs=58.2
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCcee-EEEeCCCcEE--EecEEEE
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDLSDGTSL--YAKLVVG 166 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~dg~~~--~adlvVg 166 (439)
..++...+.+.|.+.+.+.| ++|+++++|++++.++..+.....+... .+++.+ .|.+.+| ++ .||.||.
T Consensus 176 ~~~~~~~l~~~L~~~~~~~G-v~i~~~~~V~~i~~~~~~~~~~~~~~~~-----~~~~~v~~V~t~~g-~i~~~Ad~VV~ 248 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAG-VEFIFGRRVVGVELKPRVELGIEGEPLP-----WQEARASAAVLSDG-TRVEVGEKLVV 248 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTT-CEEEESCCEEEEEEEESSCCCCTTSSCT-----TSCEEEEEEEETTS-CEEEEEEEEEE
T ss_pred eEEcHHHHHHHHHHHHHhCC-CEEEcCCeEEEEEecccccccccccccc-----cCCCceEEEEeCCC-EEeecCCEEEE
Confidence 34677899999999999987 9999999999997521110000000000 012333 6778888 68 9999999
Q ss_pred ecCCCch-hhhhhCCC
Q 013625 167 ADGGKSR-VRELAGFK 181 (439)
Q Consensus 167 ADG~~S~-vR~~l~~~ 181 (439)
|.|.+|. +.+.++..
T Consensus 249 AtG~~s~~l~~~~g~~ 264 (448)
T 3axb_A 249 AAGVWSNRLLNPLGID 264 (448)
T ss_dssp CCGGGHHHHHGGGTCC
T ss_pred CCCcCHHHHHHHcCCC
Confidence 9999987 67776644
No 53
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.24 E-value=0.0061 Score=61.82 Aligned_cols=70 Identities=19% Similarity=0.164 Sum_probs=56.5
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce-eEEEeCC---C--cEEEecEE
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSD---G--TSLYAKLV 164 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~d---g--~~~~adlv 164 (439)
.++...|...|.+.+.+.| ++|+++++|+++.. +++. ..|.+.| | .++.||.|
T Consensus 166 ~vd~~~l~~~L~~~a~~~G-~~i~~~~~V~~l~~--------------------~~g~v~gV~~~d~~tg~~~~i~A~~V 224 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARG-AVALNYMKVESFIY--------------------DQGKVVGVVAKDRLTDTTHTIYAKKV 224 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTT-CEEEESEEEEEEEE--------------------ETTEEEEEEEEETTTCCEEEEEEEEE
T ss_pred eEcHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE--------------------cCCeEEEEEEEEcCCCceEEEECCEE
Confidence 5778899999999999987 99999999999987 3333 3455543 4 37999999
Q ss_pred EEecCCCc-hhhhhhCCC
Q 013625 165 VGADGGKS-RVRELAGFK 181 (439)
Q Consensus 165 VgADG~~S-~vR~~l~~~ 181 (439)
|.|+|.+| .+++.++..
T Consensus 225 V~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 225 VNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp EECCGGGHHHHHHTTTCC
T ss_pred EECCCcchHHHHHhcCCC
Confidence 99999999 678877665
No 54
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.24 E-value=0.00046 Score=61.53 Aligned_cols=67 Identities=16% Similarity=0.100 Sum_probs=55.7
Q ss_pred ehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce-eEEEeCCCcEEEecEEEEecCCC
Q 013625 93 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 93 ~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+|..+.+.|.+.+.+.++++++ +++|+++.. +++. ..|.+.+|+++.||+||.|+|.+
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~--------------------~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLL--------------------EGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--------------------ETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEE--------------------eCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 7889999999999987459998 579999976 3344 46788899999999999999999
Q ss_pred chhhhhhCC
Q 013625 172 SRVRELAGF 180 (439)
Q Consensus 172 S~vR~~l~~ 180 (439)
|..+..+|.
T Consensus 125 s~~~~~~G~ 133 (232)
T 2cul_A 125 LGARLFLGG 133 (232)
T ss_dssp SSCEEEETT
T ss_pred hhhceecCC
Confidence 998876654
No 55
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.18 E-value=0.00032 Score=71.49 Aligned_cols=64 Identities=14% Similarity=-0.020 Sum_probs=49.7
Q ss_pred ehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCccccccc-Cc--eeEEEeCCCc--EEEecEEEEe
Q 013625 93 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GH--LAKLDLSDGT--SLYAKLVVGA 167 (439)
Q Consensus 93 ~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~--~v~v~~~dg~--~~~adlvVgA 167 (439)
....+.+.|.+.+.+.+ ++|+++++|+++..+ + +. ++.+...+|+ ++.||.||.|
T Consensus 253 ~g~~l~~~L~~~~~~~g-v~i~~~~~v~~l~~~-------------------~~g~v~Gv~~~~~~g~~~~i~a~~VVlA 312 (571)
T 1y0p_A 253 VGAHVVQVLYDNAVKRN-IDLRMNTRGIEVLKD-------------------DKGTVKGILVKGMYKGYYWVKADAVILA 312 (571)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEESSEEEEEEEEC-------------------TTSCEEEEEEEETTTEEEEEECSEEEEC
T ss_pred CHHHHHHHHHHHHHhcC-CEEEeCCEeeEeEEc-------------------CCCeEEEEEEEeCCCcEEEEECCeEEEe
Confidence 34788999999999887 999999999999860 1 12 2344444676 7899999999
Q ss_pred cCCCchhhh
Q 013625 168 DGGKSRVRE 176 (439)
Q Consensus 168 DG~~S~vR~ 176 (439)
+|.+|..++
T Consensus 313 tGg~~~n~~ 321 (571)
T 1y0p_A 313 TGGFAKNNE 321 (571)
T ss_dssp CCCCTTCHH
T ss_pred CCCcccCHH
Confidence 999997554
No 56
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.18 E-value=0.00054 Score=65.27 Aligned_cols=67 Identities=15% Similarity=0.059 Sum_probs=56.0
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+.+..+...|.+.+.+.+ ++++++++|+++..+ .+..+.|.+.+|.++.+|.||.|+|.+
T Consensus 71 ~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~~-------------------~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYN-PDVVLNETVTKYTKL-------------------DDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp EEHHHHHHHHHHHHHTTC-CEEECSCCEEEEEEC-------------------TTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCHHHHHHHHHHHHHHhC-CEEEcCCEEEEEEEC-------------------CCceEEEEECCCcEEEeeEEEEccCCC
Confidence 677889999999998876 899999999999860 123688899999999999999999999
Q ss_pred chhhhhh
Q 013625 172 SRVRELA 178 (439)
Q Consensus 172 S~vR~~l 178 (439)
|.+++.+
T Consensus 131 ~~~~~~~ 137 (360)
T 3ab1_A 131 AFEPRKL 137 (360)
T ss_dssp SCCBCCC
T ss_pred cCCCCCC
Confidence 8766554
No 57
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.16 E-value=0.0023 Score=59.76 Aligned_cols=130 Identities=14% Similarity=0.138 Sum_probs=76.0
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCCCCCCcEEeeCHhHHHHHHHCCCchhhhhhhcCccceEEEEeCCCcceeEEeccCCC
Q 013625 5 KHLSVAIIDSNPALGKSNFIKKEDPPDPRVSTVTPATISFFKEIGAWQYVQQHRHAYFDKMQVWDYTGLGYTKYNARDVN 84 (439)
Q Consensus 5 ~G~~V~viE~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~L~~lGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (439)
+|++|+|+|+.+.+..... ..........+.+.....|+++|+. +.. .+.
T Consensus 89 ~g~~V~v~e~~~~~ggg~~---~~g~~~~~~~~~~~~~~~L~~~Gv~----------~~~------~g~----------- 138 (326)
T 2gjc_A 89 PDLKVCIIESSVAPGGGSW---LGGQLFSAMVMRKPAHLFLQELEIP----------YED------EGD----------- 138 (326)
T ss_dssp TTSCEEEECSSSSCCTTTT---CCGGGCCCEEEETTTHHHHHHTTCC----------CEE------CSS-----------
T ss_pred CCCeEEEEecCcccccccc---ccCcccchhhhhhHHHHHHHhhCcc----------ccc------CCC-----------
Confidence 3899999999887631111 0001112344556667777777652 110 011
Q ss_pred CccceeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe-----------
Q 013625 85 KEILGCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL----------- 153 (439)
Q Consensus 85 ~~~~~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~----------- 153 (439)
+.+..+...+...|.+.+.+.++++++.+++|+++..+++.+. ... .-.+|.+..
T Consensus 139 ---~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~------g~~-----rV~GVvv~~~~v~~~g~~~~ 204 (326)
T 2gjc_A 139 ---YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEK------GEV-----TVAGVVTNWTLVTQAHGTQC 204 (326)
T ss_dssp ---EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC----------------CEEEEEEEEHHHHTC---CC
T ss_pred ---eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccC------CCc-----EEEEEEecceeeccccccee
Confidence 0011245678999999998876699999999999987211000 000 001233321
Q ss_pred -CCCcEEEe---------------cEEEEecCCCchhhhhh
Q 013625 154 -SDGTSLYA---------------KLVVGADGGKSRVRELA 178 (439)
Q Consensus 154 -~dg~~~~a---------------dlvVgADG~~S~vR~~l 178 (439)
.++.++.| ++||.|+|..|++.+.+
T Consensus 205 ~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 205 CMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp CCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred ccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 13457999 99999999999998776
No 58
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.09 E-value=0.0012 Score=62.73 Aligned_cols=71 Identities=13% Similarity=0.222 Sum_probs=59.5
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC-ceeEEEeCCC--cEEEecEEEE
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG-HLAKLDLSDG--TSLYAKLVVG 166 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~dg--~~~~adlvVg 166 (439)
..++...+.+.|.+.+++.| ++|+++++|++++. ++ +.+.|.+.+| .++.||.||.
T Consensus 145 ~~~~~~~~~~~l~~~~~~~G-v~i~~~~~v~~i~~--------------------~~~~~~~v~~~~g~~~~~~a~~VV~ 203 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDG-AQLVFHTPLIAGRV--------------------RPEGGFELDFGGAEPMTLSCRVLIN 203 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CTTSSEEEEECTTSCEEEEEEEEEE
T ss_pred EEECHHHHHHHHHHHHHHCC-CEEECCCEEEEEEE--------------------cCCceEEEEECCCceeEEEeCEEEE
Confidence 35778899999999999987 99999999999987 22 3478888888 4899999999
Q ss_pred ecCCCc-hhhhhh-CCC
Q 013625 167 ADGGKS-RVRELA-GFK 181 (439)
Q Consensus 167 ADG~~S-~vR~~l-~~~ 181 (439)
|+|.+| .+.+.+ |..
T Consensus 204 A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 204 AAGLHAPGLARRIEGIP 220 (369)
T ss_dssp CCGGGHHHHHHTEETSC
T ss_pred CCCcchHHHHHHhcCCC
Confidence 999999 566767 654
No 59
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.09 E-value=0.003 Score=64.44 Aligned_cols=67 Identities=7% Similarity=0.008 Sum_probs=54.6
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeE-EEeCCCcEEEecEEEEec
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGAD 168 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~dg~~~~adlvVgAD 168 (439)
..++|..+...|.+.+.+.++++|+ +.+|+++.. +++.+. |.+.+|.++.||.||.|+
T Consensus 112 ~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~--------------------d~g~V~GV~t~~G~~i~Ad~VVLAT 170 (641)
T 3cp8_A 112 AQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSA--------------------NSGKFSSVTVRSGRAIQAKAAILAC 170 (641)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE--------------------ETTEEEEEEETTSCEEEEEEEEECC
T ss_pred hhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEe--------------------cCCEEEEEEECCCcEEEeCEEEECc
Confidence 5689999999999999886569995 559999876 335555 888899999999999999
Q ss_pred CCCchhhhh
Q 013625 169 GGKSRVREL 177 (439)
Q Consensus 169 G~~S~vR~~ 177 (439)
|.+|..+-.
T Consensus 171 G~~s~~~i~ 179 (641)
T 3cp8_A 171 GTFLNGLIH 179 (641)
T ss_dssp TTCBTCEEE
T ss_pred CCCCCccce
Confidence 999875543
No 60
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.04 E-value=0.003 Score=64.29 Aligned_cols=68 Identities=13% Similarity=0.071 Sum_probs=55.7
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc-eeEEEeCCCcEEEecEEEEec
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH-LAKLDLSDGTSLYAKLVVGAD 168 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~~dg~~~~adlvVgAD 168 (439)
..++|..+.+.|.+.+.+.++++| ++.+|+++.. +++ ...|.+.+|.++.||.||.|+
T Consensus 118 ~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~--------------------e~g~V~GV~t~dG~~i~AdaVVLAT 176 (637)
T 2zxi_A 118 AQADKKRYREYMKKVCENQENLYI-KQEEVVDIIV--------------------KNNQVVGVRTNLGVEYKTKAVVVTT 176 (637)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEE--------------------SSSBEEEEEETTSCEEECSEEEECC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEe--------------------cCCEEEEEEECCCcEEEeCEEEEcc
Confidence 467899999999999988655999 5779999976 223 346888999999999999999
Q ss_pred CCCchhhhhh
Q 013625 169 GGKSRVRELA 178 (439)
Q Consensus 169 G~~S~vR~~l 178 (439)
|.+|..+...
T Consensus 177 G~~s~~~~~~ 186 (637)
T 2zxi_A 177 GTFLNGVIYI 186 (637)
T ss_dssp TTCBTCEEEE
T ss_pred CCCccCceec
Confidence 9998876543
No 61
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.04 E-value=0.00078 Score=63.38 Aligned_cols=67 Identities=24% Similarity=0.188 Sum_probs=55.7
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+.+..+...|.+.+.+.+ ++++++++|++++. .++.+.|.+.+|.++.+|.||.|+|.+
T Consensus 62 ~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~--------------------~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFN-PVYSLGERAETLER--------------------EGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp EEHHHHHHHHHHHHGGGC-CEEEESCCEEEEEE--------------------ETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEeCCEEEEEEE--------------------CCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 567888888988888776 89999999999976 334688888899899999999999998
Q ss_pred chhhhhhC
Q 013625 172 SRVRELAG 179 (439)
Q Consensus 172 S~vR~~l~ 179 (439)
|...+...
T Consensus 121 ~~~p~~~~ 128 (335)
T 2zbw_A 121 AFEPRRIG 128 (335)
T ss_dssp EEEECCCC
T ss_pred CCCCCCCC
Confidence 86665543
No 62
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.92 E-value=0.031 Score=54.20 Aligned_cols=61 Identities=13% Similarity=0.211 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
..+.+.|.+.+.+.| ++|+++++|++|.. +++++ | ..+|.++.||.||-|-|.+...
T Consensus 189 ~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 189 KAVIDELERIIMENK-GKILTRKEVVEINI--------------------EEKKV-Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHHTTT-CEEESSCCEEEEET--------------------TTTEE-E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHCC-CEEEcCCeEEEEEE--------------------ECCEE-E-EeCCcEEEeCEEEECCCHHHHH
Confidence 467788888888887 99999999999986 44566 5 5678899999999999987654
Q ss_pred hhhhC
Q 013625 175 RELAG 179 (439)
Q Consensus 175 R~~l~ 179 (439)
+.++
T Consensus 246 -~ll~ 249 (421)
T 3nrn_A 246 -KLIG 249 (421)
T ss_dssp -HHHC
T ss_pred -HhcC
Confidence 4554
No 63
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.85 E-value=0.017 Score=54.91 Aligned_cols=51 Identities=22% Similarity=0.092 Sum_probs=43.2
Q ss_pred eeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEec
Q 013625 89 GCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGAD 168 (439)
Q Consensus 89 ~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgAD 168 (439)
+..++...|...|.+.+.+.| ++|+. ++|++++. . .+ .||.||.|+
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~G-~~i~~-~~v~~l~~----------------------~---------~~-~a~~VV~A~ 181 (363)
T 1c0p_A 136 TLSVHAPKYCQYLARELQKLG-ATFER-RTVTSLEQ----------------------A---------FD-GADLVVNAT 181 (363)
T ss_dssp EEECCHHHHHHHHHHHHHHTT-CEEEE-CCCSBGGG----------------------T---------CS-SCSEEEECC
T ss_pred cceecHHHHHHHHHHHHHHCC-CEEEE-EEcccHhh----------------------c---------Cc-CCCEEEECC
Confidence 356889999999999999997 99998 99999865 1 02 799999999
Q ss_pred CCCch
Q 013625 169 GGKSR 173 (439)
Q Consensus 169 G~~S~ 173 (439)
|.+|.
T Consensus 182 G~~s~ 186 (363)
T 1c0p_A 182 GLGAK 186 (363)
T ss_dssp GGGGG
T ss_pred Ccchh
Confidence 99995
No 64
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.85 E-value=0.0018 Score=63.40 Aligned_cols=62 Identities=13% Similarity=0.070 Sum_probs=54.6
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCC---eeEEeeeCCCCCCcccCCCCCcccccccCceeE-EEeCCCcEEEecEEEE
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPS---RLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVG 166 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~---~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~dg~~~~adlvVg 166 (439)
.++...+.+.|.+.+.+.| ++|++++ +|+++.. +++.++ |.+.+|+++.||.||.
T Consensus 157 ~~~~~~~~~~L~~~a~~~G-v~i~~~t~~~~V~~i~~--------------------~~~~v~gV~t~~G~~i~Ad~VV~ 215 (438)
T 3dje_A 157 WAHARNALVAAAREAQRMG-VKFVTGTPQGRVVTLIF--------------------ENNDVKGAVTADGKIWRAERTFL 215 (438)
T ss_dssp EECHHHHHHHHHHHHHHTT-CEEEESTTTTCEEEEEE--------------------ETTEEEEEEETTTEEEECSEEEE
T ss_pred EecHHHHHHHHHHHHHhcC-CEEEeCCcCceEEEEEe--------------------cCCeEEEEEECCCCEEECCEEEE
Confidence 4566789999999999987 9999999 9999987 445676 9999999999999999
Q ss_pred ecCCCch
Q 013625 167 ADGGKSR 173 (439)
Q Consensus 167 ADG~~S~ 173 (439)
|+|.+|.
T Consensus 216 AtG~~s~ 222 (438)
T 3dje_A 216 CAGASAG 222 (438)
T ss_dssp CCGGGGG
T ss_pred CCCCChh
Confidence 9999985
No 65
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.70 E-value=0.0037 Score=60.57 Aligned_cols=71 Identities=17% Similarity=0.168 Sum_probs=55.4
Q ss_pred ehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCc
Q 013625 93 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 93 ~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 172 (439)
++..+.+.|.+.+.+.+ ++|+++++|+++..+ ++. .++.+.|.+++| +++||.||.|+|.+|
T Consensus 107 ~~~~l~~~L~~~~~~~G-v~i~~~~~v~~i~~~---------~~g-------~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYG-AKILLRSEVSQVERI---------QND-------EKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHT-CEEECSCCEEEEEEC---------CSC-------SSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCC-CEEEeCCEEEEEEcc---------cCc-------CCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 56888889999998887 999999999999861 000 034578888877 899999999999999
Q ss_pred -----------hhhhhhCCC
Q 013625 173 -----------RVRELAGFK 181 (439)
Q Consensus 173 -----------~vR~~l~~~ 181 (439)
.+.+.+|..
T Consensus 169 ~p~~g~~G~g~~la~~~G~~ 188 (401)
T 2gqf_A 169 MPGLGATPFGYQIAEQFGIP 188 (401)
T ss_dssp CGGGTCCSHHHHHHHHTTCC
T ss_pred CCCCCCChHHHHHHHHCCCC
Confidence 555666544
No 66
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.64 E-value=0.042 Score=51.62 Aligned_cols=50 Identities=14% Similarity=0.145 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecC
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 169 (439)
.+.+.|.+.+ + ++|+++++|++++. ++++++|++++|+++.+|.||.|-.
T Consensus 113 ~l~~~l~~~~---g-~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g~~~~ad~vV~A~p 162 (342)
T 3qj4_A 113 SIIKHYLKES---G-AEVYFRHRVTQINL--------------------RDDKWEVSKQTGSPEQFDLIVLTMP 162 (342)
T ss_dssp HHHHHHHHHH---T-CEEESSCCEEEEEE--------------------CSSSEEEEESSSCCEEESEEEECSC
T ss_pred HHHHHHHHhc---C-CEEEeCCEEEEEEE--------------------cCCEEEEEECCCCEEEcCEEEECCC
Confidence 4444455544 5 89999999999987 4567999999998899999999976
No 67
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.61 E-value=0.0044 Score=59.08 Aligned_cols=62 Identities=10% Similarity=0.176 Sum_probs=52.8
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecC
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 169 (439)
..++...+.+.|.+.+.+.| ++|+++++|++++. +++.+.|.+.+|+ +.||.||.|+|
T Consensus 144 g~~~~~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g~-~~a~~vV~a~G 201 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAG-CAQLFNCPVTAIRH--------------------DDDGVTIETADGE-YQAKKAIVCAG 201 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSSEEEEESSCE-EEEEEEEECCG
T ss_pred cEEcHHHHHHHHHHHHHHCC-CEEEcCCEEEEEEE--------------------cCCEEEEEECCCe-EEcCEEEEcCC
Confidence 34677889999999999887 99999999999987 3355788888884 99999999999
Q ss_pred CCch
Q 013625 170 GKSR 173 (439)
Q Consensus 170 ~~S~ 173 (439)
.+|.
T Consensus 202 ~~s~ 205 (372)
T 2uzz_A 202 TWVK 205 (372)
T ss_dssp GGGG
T ss_pred ccHH
Confidence 9874
No 68
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=96.57 E-value=0.026 Score=55.67 Aligned_cols=54 Identities=15% Similarity=0.105 Sum_probs=42.0
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
.|.+.|.+.+. .++|+++++|++|+. .+++++|++.+| ++.||.||-|=+....
T Consensus 237 ~l~~~l~~~l~---~~~i~~~~~V~~i~~--------------------~~~~~~v~~~~g-~~~ad~vV~a~p~~~~ 290 (475)
T 3lov_A 237 SLIERLEEVLE---RSEIRLETPLLAISR--------------------EDGRYRLKTDHG-PEYADYVLLTIPHPQV 290 (475)
T ss_dssp HHHHHHHHHCS---SCEEESSCCCCEEEE--------------------ETTEEEEECTTC-CEEESEEEECSCHHHH
T ss_pred HHHHHHHhhcc---CCEEEcCCeeeEEEE--------------------eCCEEEEEECCC-eEECCEEEECCCHHHH
Confidence 34555555553 269999999999987 456799999999 8999999999886544
No 69
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.21 E-value=0.0084 Score=56.44 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=53.3
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeE-EEeCCCcEEEecEEEEecC
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~dg~~~~adlvVgADG 169 (439)
..++..+...|.+.+.+.+ ++++++++|++++. .++.+. |.+++| ++.+|.||.|+|
T Consensus 72 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~i~~--------------------~~~~~~~v~~~~g-~~~~d~vV~AtG 129 (357)
T 4a9w_A 72 YPARAEVLAYLAQYEQKYA-LPVLRPIRVQRVSH--------------------FGERLRVVARDGR-QWLARAVISATG 129 (357)
T ss_dssp SCBHHHHHHHHHHHHHHTT-CCEECSCCEEEEEE--------------------ETTEEEEEETTSC-EEEEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEE--------------------CCCcEEEEEeCCC-EEEeCEEEECCC
Confidence 3678899999999998886 99999999999987 456778 888888 899999999999
Q ss_pred CCch
Q 013625 170 GKSR 173 (439)
Q Consensus 170 ~~S~ 173 (439)
.+|.
T Consensus 130 ~~~~ 133 (357)
T 4a9w_A 130 TWGE 133 (357)
T ss_dssp SGGG
T ss_pred CCCC
Confidence 9874
No 70
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.18 E-value=0.15 Score=49.27 Aligned_cols=61 Identities=15% Similarity=0.114 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeE-EEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAK-LDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..|.+.|.+.+.+.| ++|+++++|++|.. +++.++ |+++ |.++.||.||-|-|.+..
T Consensus 196 ~~l~~~l~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANG-GKIHTGQEVSKILI--------------------ENGKAAGIIAD-DRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEET-TEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcC-CEEEECCceeEEEE--------------------ECCEEEEEEEC-CEEEECCEEEECCCHHHH
Confidence 457788888888887 89999999999987 345555 6664 889999999999998766
Q ss_pred hhhhh
Q 013625 174 VRELA 178 (439)
Q Consensus 174 vR~~l 178 (439)
.+ .+
T Consensus 254 ~~-ll 257 (425)
T 3ka7_A 254 AV-LC 257 (425)
T ss_dssp HH-HT
T ss_pred HH-hc
Confidence 43 44
No 71
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.17 E-value=0.12 Score=50.96 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=44.6
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce-eEEEeCCCcEEEecEEEEecCCCch
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
.|-+.|.+.+.+.| ++|+++++|++|+. ++++ +.|++ +|.++.||.||-|-+....
T Consensus 235 ~l~~~l~~~l~~~g-~~i~~~~~V~~i~~--------------------~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 235 MLPQALETHLTSRG-VSVLRGQPVCGLSL--------------------QAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHHTT-CEEECSCCCCEEEE--------------------CGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcC-CEEEeCCEEEEEEE--------------------cCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 58888899888886 89999999999987 3334 77766 4558999999999876443
No 72
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.99 E-value=0.0088 Score=58.76 Aligned_cols=63 Identities=8% Similarity=-0.068 Sum_probs=52.7
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC---Cc---EEEecEE
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---GT---SLYAKLV 164 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~---~~~adlv 164 (439)
.++|..+.+.|.+.+.+.+ +.|+++++|++++. .++.++|++.+ |+ ++.+|.|
T Consensus 111 ~~~~~~l~~~l~~~~~~~~-~~i~~~t~V~~v~~--------------------~~~~~~V~~~~~~~G~~~~~~~~d~V 169 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLL-PFIKLATDVLDIEK--------------------KDGSWVVTYKGTKAGSPISKDIFDAV 169 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGG-GGEECSEEEEEEEE--------------------ETTEEEEEEEESSTTCCEEEEEESEE
T ss_pred CCCHHHHHHHHHHHHHHhh-CeEEeCCEEEEEEe--------------------CCCeEEEEEeecCCCCeeEEEEeCEE
Confidence 4678999999999998775 78999999999976 44667777765 76 8999999
Q ss_pred EEecCCCchh
Q 013625 165 VGADGGKSRV 174 (439)
Q Consensus 165 VgADG~~S~v 174 (439)
|.|+|.+|.-
T Consensus 170 VvAtG~~s~p 179 (447)
T 2gv8_A 170 SICNGHYEVP 179 (447)
T ss_dssp EECCCSSSSB
T ss_pred EECCCCCCCC
Confidence 9999998853
No 73
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=95.97 E-value=0.15 Score=49.41 Aligned_cols=50 Identities=18% Similarity=0.244 Sum_probs=39.6
Q ss_pred HHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 101 LLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 101 L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
|.+.+.+..+ +|+++++|++|+. ++++++|++++|++++||.||-|-|..
T Consensus 209 l~~~~~~~~g-~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 209 LVDAMSQEIP-EIRLQTVVTGIDQ--------------------SGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHTTCS-CEESSCCEEEEEC--------------------SSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHhhCC-ceEeCCEEEEEEE--------------------cCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 3444444333 9999999999987 456789999999999999999999953
No 74
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.93 E-value=0.016 Score=58.34 Aligned_cols=65 Identities=18% Similarity=0.154 Sum_probs=55.1
Q ss_pred eeehHHHHHHHHHHhhcCCCc--EEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEec
Q 013625 91 VVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGAD 168 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v--~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgAD 168 (439)
..++.++.+.|.+.+.+.+ + +|+++++|++++. + ++...++|++++|+++.+|.||.|+
T Consensus 83 ~~~~~ei~~~l~~~~~~~g-~~~~i~~~~~V~~i~~---------~---------~~~~~~~V~~~~G~~i~ad~lV~At 143 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFD-LRRHFKFGTEVTSALY---------L---------DDENLWEVTTDHGEVYRAKYVVNAV 143 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTT-CGGGEEESCCEEEEEE---------E---------TTTTEEEEEETTSCEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcC-CcceeEeccEEEEEEE---------e---------CCCCEEEEEEcCCCEEEeCEEEECC
Confidence 4788999999999998886 6 8999999999987 1 1235789999999999999999999
Q ss_pred CCCchh
Q 013625 169 GGKSRV 174 (439)
Q Consensus 169 G~~S~v 174 (439)
|..|.-
T Consensus 144 G~~s~p 149 (540)
T 3gwf_A 144 GLLSAI 149 (540)
T ss_dssp CSCCSB
T ss_pred cccccC
Confidence 988753
No 75
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.67 E-value=0.019 Score=53.02 Aligned_cols=63 Identities=19% Similarity=0.128 Sum_probs=52.9
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
.+++..+.+.|.+.+.+.+ +++++ .+|+++.. .++.+.|.+.+|.++.+|.||.|+|.
T Consensus 55 ~~~~~~~~~~l~~~~~~~~-v~~~~-~~v~~i~~--------------------~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFG-LKHEM-TAVQRVSK--------------------KDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTS-CEEEC-SCEEEEEE--------------------ETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred cCCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEE--------------------cCCEEEEEEcCCCEEECCEEEECCCC
Confidence 4778899999999888876 99998 79999976 34567888889999999999999998
Q ss_pred Cchhh
Q 013625 171 KSRVR 175 (439)
Q Consensus 171 ~S~vR 175 (439)
++.+.
T Consensus 113 ~~~~~ 117 (311)
T 2q0l_A 113 SPKRT 117 (311)
T ss_dssp EECCC
T ss_pred CCCCC
Confidence 77543
No 76
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.55 E-value=0.026 Score=56.86 Aligned_cols=66 Identities=14% Similarity=0.161 Sum_probs=52.8
Q ss_pred eehHHHHHHHHHHhhcCC-CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 92 VENKVLHSSLLSCMQNTE-FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~-~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
.++.++.+.|...+.+.+ .++|+++++|++++. ++ +.+.++|++++|+++.||+||.|+|.
T Consensus 91 ~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~---------~~---------~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAF---------DE---------ATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEE---------ET---------TTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEE---------cC---------CCCeEEEEECCCCEEEeCEEEECcCC
Confidence 567888888888777654 268999999999986 11 23568899999999999999999999
Q ss_pred Cchhh
Q 013625 171 KSRVR 175 (439)
Q Consensus 171 ~S~vR 175 (439)
+|.-+
T Consensus 153 ~s~p~ 157 (542)
T 1w4x_A 153 LSVPQ 157 (542)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 88543
No 77
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=95.50 E-value=0.35 Score=48.19 Aligned_cols=53 Identities=8% Similarity=0.035 Sum_probs=42.5
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
|-+.|.+.+ + ++|+++++|++|+. +++++.|++.||+++.||.||.|-+....
T Consensus 217 l~~~l~~~l---g-~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 217 VSERIMDLL---G-DRVKLERPVIYIDQ--------------------TRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHH---G-GGEESSCCEEEEEC--------------------SSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHc---C-CcEEcCCeeEEEEE--------------------CCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 444444444 4 78999999999986 44668899999999999999999998763
No 78
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.50 E-value=0.026 Score=54.13 Aligned_cols=66 Identities=23% Similarity=0.232 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
..+.+.|.+.+++.| ++|+++++|++++. +++.+.|.+.||+++.+|.||.|.|.++..
T Consensus 187 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLG-VRFHLGPVLASLKK--------------------AGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp HHHHHHHHHHHHTTT-CEEEESCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCEEEEEEe--------------------cCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 456788888888887 99999999999976 346688899999999999999999987754
Q ss_pred --hhhhCCC
Q 013625 175 --RELAGFK 181 (439)
Q Consensus 175 --R~~l~~~ 181 (439)
-+.++..
T Consensus 246 ~l~~~~g~~ 254 (384)
T 2v3a_A 246 ELAFAAGLA 254 (384)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHCCCC
Confidence 3445544
No 79
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.38 E-value=0.019 Score=53.62 Aligned_cols=61 Identities=15% Similarity=0.096 Sum_probs=50.5
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
.+++..+...|.+.+.+.+ +++++++ |+++.. .++.++|.+ +|.++.+|.||.|+|.
T Consensus 66 ~~~~~~~~~~l~~~~~~~g-v~~~~~~-v~~i~~--------------------~~~~~~v~~-~~~~~~~~~vv~A~G~ 122 (333)
T 1vdc_A 66 GILGVELTDKFRKQSERFG-TTIFTET-VTKVDF--------------------SSKPFKLFT-DSKAILADAVILAIGA 122 (333)
T ss_dssp CEEHHHHHHHHHHHHHHTT-CEEECCC-CCEEEC--------------------SSSSEEEEC-SSEEEEEEEEEECCCE
T ss_pred CCCHHHHHHHHHHHHHHCC-CEEEEeE-EEEEEE--------------------cCCEEEEEE-CCcEEEcCEEEECCCC
Confidence 3678899999999888886 9999987 999876 335577777 7889999999999999
Q ss_pred Cchh
Q 013625 171 KSRV 174 (439)
Q Consensus 171 ~S~v 174 (439)
++..
T Consensus 123 ~~~~ 126 (333)
T 1vdc_A 123 VAKR 126 (333)
T ss_dssp EECC
T ss_pred CcCC
Confidence 8754
No 80
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=95.26 E-value=0.19 Score=49.41 Aligned_cols=54 Identities=19% Similarity=0.141 Sum_probs=41.5
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe---CCCcEEEecEEEEecCCCc
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~~~~adlvVgADG~~S 172 (439)
.|.+.|.+.+ + ++|+++++|++|.. +++++.|++ .+|.++.||.||-|-+...
T Consensus 239 ~l~~~l~~~l---g-~~i~~~~~V~~i~~--------------------~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 239 VLIDALAASL---G-DAAHVGARVEGLAR--------------------EDGGWRLIIEEHGRRAELSVAQVVLAAPAHA 294 (478)
T ss_dssp HHHHHHHHHH---G-GGEESSEEEEEEEC--------------------C--CCEEEEEETTEEEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHh---h-hhEEcCCEEEEEEe--------------------cCCeEEEEEeecCCCceEEcCEEEECCCHHH
Confidence 4555565555 4 69999999999986 335588888 7888999999999998765
Q ss_pred h
Q 013625 173 R 173 (439)
Q Consensus 173 ~ 173 (439)
.
T Consensus 295 ~ 295 (478)
T 2ivd_A 295 T 295 (478)
T ss_dssp H
T ss_pred H
Confidence 4
No 81
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.17 E-value=0.038 Score=54.25 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
..+.+.|.+.+++.+ ++|+++++|++++. +++.+.+.+++|+++.+|.||.|.|.++..
T Consensus 208 ~~~~~~l~~~l~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 LEVSRAAERVFKKQG-LTIRTGVRVTAVVP--------------------EAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEECCEEEEEEE--------------------eCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 467777888888776 99999999999976 445688888899999999999999998765
No 82
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.02 E-value=0.034 Score=59.20 Aligned_cols=70 Identities=14% Similarity=0.140 Sum_probs=56.3
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCcee-EEEeCCCcEEEecEEEEec
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDLSDGTSLYAKLVVGAD 168 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~dg~~~~adlvVgAD 168 (439)
..++...+.+.|.+.+.+.| ++|+.+++|++++. +++.+ .|.+++| ++.||.||.|+
T Consensus 146 g~v~p~~l~~~L~~~a~~~G-v~i~~~t~V~~i~~--------------------~~~~v~~V~t~~G-~i~Ad~VV~Aa 203 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAG-VTYRGSTTVTGIEQ--------------------SGGRVTGVQTADG-VIPADIVVSCA 203 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEETTE-EEECSEEEECC
T ss_pred ceEcHHHHHHHHHHHHHHcC-CEEECCceEEEEEE--------------------eCCEEEEEEECCc-EEECCEEEECC
Confidence 34688899999999999987 99999999999986 33444 5777777 79999999999
Q ss_pred CCCchh-hhhhCCC
Q 013625 169 GGKSRV-RELAGFK 181 (439)
Q Consensus 169 G~~S~v-R~~l~~~ 181 (439)
|.+|.. .+.++..
T Consensus 204 G~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 204 GFWGAKIGAMIGMA 217 (830)
T ss_dssp GGGHHHHHHTTTCC
T ss_pred ccchHHHHHHhCCC
Confidence 999964 3444543
No 83
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.92 E-value=0.043 Score=55.34 Aligned_cols=64 Identities=20% Similarity=0.231 Sum_probs=53.6
Q ss_pred eeehHHHHHHHHHHhhcCCCc--EEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEec
Q 013625 91 VVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGAD 168 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v--~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgAD 168 (439)
..++.++...|.+.+.+.+ + .++++++|++++. + ++...++|++++|+++.+|+||.|+
T Consensus 95 ~~~~~ei~~yl~~~~~~~g-~~~~i~~~~~V~~i~~---------~---------~~~~~w~V~~~~G~~i~ad~lV~At 155 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFD-LRRDIRFDTRVTSAVL---------D---------EEGLRWTVRTDRGDEVSARFLVVAA 155 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTT-CGGGEECSCCEEEEEE---------E---------TTTTEEEEEETTCCEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcC-CCccEEECCEEEEEEE---------c---------CCCCEEEEEECCCCEEEeCEEEECc
Confidence 3678899999999888876 5 8999999999987 1 1235789999999999999999999
Q ss_pred CCCch
Q 013625 169 GGKSR 173 (439)
Q Consensus 169 G~~S~ 173 (439)
|..|.
T Consensus 156 G~~s~ 160 (549)
T 4ap3_A 156 GPLSN 160 (549)
T ss_dssp CSEEE
T ss_pred CCCCC
Confidence 98764
No 84
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.89 E-value=0.044 Score=55.90 Aligned_cols=64 Identities=17% Similarity=0.118 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc---eeEEE-eCCCc--EEEecEEEEec
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH---LAKLD-LSDGT--SLYAKLVVGAD 168 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~v~v~-~~dg~--~~~adlvVgAD 168 (439)
..+...|.+.+.+.++++|++++.|+++.. +++ ++.+. ..+|+ ++.|+.||.|+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~--------------------~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAt 193 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILV--------------------DDGHVRGLVAMNMMEGTLVQIRANAVVMAT 193 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEE--------------------ETTEEEEEEEEETTTTEEEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEE--------------------eCCEEEEEEEEEcCCCcEEEEEcCeEEECC
Confidence 578899999998887799999999999986 223 23333 36786 79999999999
Q ss_pred CCCchhhhhh
Q 013625 169 GGKSRVRELA 178 (439)
Q Consensus 169 G~~S~vR~~l 178 (439)
|.+|.++...
T Consensus 194 Gg~s~~~~~~ 203 (602)
T 1kf6_A 194 GGAGRVYRYN 203 (602)
T ss_dssp CCCGGGSSSB
T ss_pred CCCcccccCc
Confidence 9999997654
No 85
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.78 E-value=0.06 Score=49.55 Aligned_cols=65 Identities=20% Similarity=0.292 Sum_probs=52.1
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
.++..+...|.+.+.+.+ ++++++++|+.+.. +.. ++..+.|.+++|+++.+|.||.|+|.+
T Consensus 53 ~~~~~~~~~~~~~~~~~~-v~~~~~~~v~~i~~---------~~~--------~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYD-VDVIDSQSASKLIP---------AAV--------EGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp EEHHHHHHHHHHHHHTSC-EEEECSCCEEEEEC---------CSS--------TTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHcC-CeEEccCEEEEEEe---------ccc--------CCceEEEEECCCCEEEeCEEEECcCCC
Confidence 567788888988888876 99999999999975 000 124688889999999999999999987
Q ss_pred chh
Q 013625 172 SRV 174 (439)
Q Consensus 172 S~v 174 (439)
+..
T Consensus 115 ~~~ 117 (310)
T 1fl2_A 115 WRN 117 (310)
T ss_dssp ECC
T ss_pred cCC
Confidence 643
No 86
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=94.47 E-value=0.071 Score=54.05 Aligned_cols=65 Identities=17% Similarity=0.043 Sum_probs=49.9
Q ss_pred ehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCccccccc-Cc--eeEEEeCCCc--EEEecEEEEe
Q 013625 93 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GH--LAKLDLSDGT--SLYAKLVVGA 167 (439)
Q Consensus 93 ~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~--~v~v~~~dg~--~~~adlvVgA 167 (439)
....+...|.+.+.+.+ ++|+++++|+++..+ + +. +|.+...+|+ ++.||.||.|
T Consensus 253 ~g~~l~~~L~~~~~~~g-v~i~~~t~v~~l~~~-------------------~~g~v~GV~~~~~~G~~~~i~A~~VVlA 312 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRG-TDIRLNSRVVRILED-------------------ASGKVTGVLVKGEYTGYYVIKADAVVIA 312 (572)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEESSEEEEEEEEC---------------------CCEEEEEEEETTTEEEEEECSEEEEC
T ss_pred CHHHHHHHHHHHHHHcC-CeEEecCEEEEEEEC-------------------CCCeEEEEEEEeCCCcEEEEEcCEEEEe
Confidence 45688899999999887 999999999999760 1 22 2444434675 7899999999
Q ss_pred cCCCchhhhh
Q 013625 168 DGGKSRVREL 177 (439)
Q Consensus 168 DG~~S~vR~~ 177 (439)
+|.+|..++.
T Consensus 313 tGg~~~~~~~ 322 (572)
T 1d4d_A 313 AGGFAKNNER 322 (572)
T ss_dssp CCCCTTCHHH
T ss_pred CCCCccCHHH
Confidence 9999976543
No 87
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.40 E-value=0.056 Score=54.46 Aligned_cols=66 Identities=12% Similarity=0.181 Sum_probs=52.9
Q ss_pred eeehHHHHHHHHHHhhcCCCc--EEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEec
Q 013625 91 VVENKVLHSSLLSCMQNTEFQ--KTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGAD 168 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v--~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgAD 168 (439)
..++.++...|.+.+.+.+ + .++++++|++++. + ++...++|++++|+++.+|+||.|+
T Consensus 83 ~~~~~ei~~yl~~~~~~~~-l~~~i~~~~~V~~~~~---------~---------~~~~~w~V~~~~G~~~~ad~lV~At 143 (545)
T 3uox_A 83 FASQPEMLRYVNRAADAMD-VRKHYRFNTRVTAARY---------V---------ENDRLWEVTLDNEEVVTCRFLISAT 143 (545)
T ss_dssp SCBHHHHHHHHHHHHHHHT-CGGGEECSCCEEEEEE---------E---------GGGTEEEEEETTTEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcC-CcCcEEECCEEEEEEE---------e---------CCCCEEEEEECCCCEEEeCEEEECc
Confidence 3678889898888888765 5 8999999999976 0 1236789999999999999999999
Q ss_pred CCCchhh
Q 013625 169 GGKSRVR 175 (439)
Q Consensus 169 G~~S~vR 175 (439)
|..|.-+
T Consensus 144 G~~s~p~ 150 (545)
T 3uox_A 144 GPLSASR 150 (545)
T ss_dssp CSCBC--
T ss_pred CCCCCCc
Confidence 9877543
No 88
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=94.39 E-value=0.45 Score=47.09 Aligned_cols=35 Identities=9% Similarity=0.190 Sum_probs=29.5
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhc
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 358 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 358 (439)
+++.++||+.+ |.|++-|+.+|...|+.|...+..
T Consensus 461 ~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 461 PGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp TTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999865 458999999999999999887653
No 89
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.36 E-value=0.23 Score=50.22 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=51.3
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce-eEEEeC---CCc--EEEecEEE
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLS---DGT--SLYAKLVV 165 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~---dg~--~~~adlvV 165 (439)
++-..|...|.+.+.+.| ++|+.+++|+++.. +++. +.|.+. +|. ++.||.||
T Consensus 185 v~~~~l~~~l~~~a~~~G-a~i~~~t~V~~l~~--------------------~~~~v~gV~~~d~~tg~~~~i~A~~VV 243 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDG-AYLVSKMKAVGFLY--------------------EGDQIVGVKARDLLTDEVIEIKAKLVI 243 (571)
T ss_dssp CCHHHHHHHHHHHHHHTT-CEEESSEEEEEEEE--------------------ETTEEEEEEEEETTTCCEEEEEBSCEE
T ss_pred EchHHHHHHHHHHHHHcC-CeEEeccEEEEEEE--------------------eCCEEEEEEEEEcCCCCEEEEEcCEEE
Confidence 566778888889888887 99999999999987 2233 335543 343 79999999
Q ss_pred EecCCCc-hhhhhhCC
Q 013625 166 GADGGKS-RVRELAGF 180 (439)
Q Consensus 166 gADG~~S-~vR~~l~~ 180 (439)
-|.|.+| .+++..+.
T Consensus 244 ~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 244 NTSGPWVDKVRNLNFT 259 (571)
T ss_dssp ECCGGGHHHHHTTCCS
T ss_pred ECCChhHHHHHHhhcc
Confidence 9999998 45555543
No 90
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.17 E-value=0.067 Score=53.01 Aligned_cols=59 Identities=19% Similarity=0.211 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
..+.+.|.+.+++.| ++|+.+++|++++. +++.+.|.+++|+++.+|.||-|.|..+..
T Consensus 232 ~~~~~~l~~~l~~~G-v~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKG-ISIIYEATVSQVQS--------------------TENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHHT-CEEESSCCEEEEEE--------------------CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEe--------------------eCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 356777788887776 99999999999987 446688999999999999999999986654
No 91
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.15 E-value=0.068 Score=52.38 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC-ceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG-HLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..+.+.|.+.+++.| ++++++++|++++. ++ +.+.|.++||+++.+|+||.|.|.++.
T Consensus 208 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 208 PMISETLVEVMNAEG-PQLHTNAIPKAVVK--------------------NTDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHHHHHHHHHHHS-CEEECSCCEEEEEE--------------------CTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------------eCCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 356777888888877 99999999999976 22 347888999999999999999998776
Q ss_pred h
Q 013625 174 V 174 (439)
Q Consensus 174 v 174 (439)
+
T Consensus 267 ~ 267 (450)
T 1ges_A 267 N 267 (450)
T ss_dssp C
T ss_pred C
Confidence 5
No 92
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.91 E-value=0.1 Score=51.36 Aligned_cols=59 Identities=19% Similarity=0.118 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc-EEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-SLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~-~~~adlvVgADG~~S~ 173 (439)
..+.+.|.+.+++.+ ++|+++++|++++. +++++.|.++||+ ++.+|+||-|.|.+..
T Consensus 207 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 207 PLLSATLAENMHAQG-IETHLEFAVAALER--------------------DAQGTTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp HHHHHHHHHHHHHTT-CEEESSCCEEEEEE--------------------ETTEEEEEETTCCEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------------eCCeEEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 356677888888887 99999999999976 3345888999999 8999999999998765
Q ss_pred h
Q 013625 174 V 174 (439)
Q Consensus 174 v 174 (439)
+
T Consensus 266 ~ 266 (463)
T 2r9z_A 266 T 266 (463)
T ss_dssp C
T ss_pred C
Confidence 4
No 93
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.89 E-value=0.12 Score=46.92 Aligned_cols=64 Identities=9% Similarity=-0.076 Sum_probs=52.6
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
.+....+...|.+.+.+.++++++.+ +|+++.. .++.+.|.+++|+++.+|.||.|.|.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~--------------------~~~~~~v~~~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 52 GKAPGEIIAEARRQIERYPTIHWVEG-RVTDAKG--------------------SFGEFIVEIDGGRRETAGRLILAMGV 110 (297)
T ss_dssp TCCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEE--------------------ETTEEEEEETTSCEEEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEE--------------------cCCeEEEEECCCCEEEcCEEEECCCC
Confidence 36678889999999988766887655 9999977 44668899999999999999999999
Q ss_pred Cchhh
Q 013625 171 KSRVR 175 (439)
Q Consensus 171 ~S~vR 175 (439)
++...
T Consensus 111 ~~~~~ 115 (297)
T 3fbs_A 111 TDELP 115 (297)
T ss_dssp EEECC
T ss_pred CCCCC
Confidence 76543
No 94
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.82 E-value=0.16 Score=47.07 Aligned_cols=62 Identities=19% Similarity=0.187 Sum_probs=51.9
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+.+.++...|.+.+.+.+ ++++++++|+++.. +.++.+.|.+.+|+ +.+|.||.|.|.+
T Consensus 64 ~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~-------------------~~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFD-QTICLEQAVESVEK-------------------QADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp EEHHHHHHHHHHHHTTSC-CEEECSCCEEEEEE-------------------CTTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred CCHHHHHHHHHHHHHHhC-CcEEccCEEEEEEE-------------------CCCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 567899999999998886 99999999999987 01236888998887 9999999999997
Q ss_pred chh
Q 013625 172 SRV 174 (439)
Q Consensus 172 S~v 174 (439)
|..
T Consensus 123 ~~~ 125 (332)
T 3lzw_A 123 AFK 125 (332)
T ss_dssp CCE
T ss_pred cCC
Confidence 643
No 95
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.79 E-value=0.058 Score=53.17 Aligned_cols=66 Identities=12% Similarity=0.090 Sum_probs=51.1
Q ss_pred eeehHHHHHHHHHHhhcCCCcE--EEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC---C--cEEEecE
Q 013625 91 VVENKVLHSSLLSCMQNTEFQK--TIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---G--TSLYAKL 163 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~--v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g--~~~~adl 163 (439)
.+++..+.+.|.+.+.+.+ ++ |+++++|++++.. . +.+.++|++.+ | .++.+|.
T Consensus 97 ~~~~~~l~~~l~~~~~~~g-v~~~i~~~~~V~~v~~~---------~---------~~~~~~V~~~~~~~g~~~~~~~d~ 157 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAG-VRKYIRFNTAVRHVEFN---------E---------DSQTFTVTVQDHTTDTIYSEEFDY 157 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHT-CGGGEECSEEEEEEEEE---------T---------TTTEEEEEEEETTTTEEEEEEESE
T ss_pred CCCHHHHHHHHHHHHHHcC-CcceEEeCCEEEEEEEc---------C---------CCCcEEEEEEEcCCCceEEEEcCE
Confidence 4688999999999888776 77 9999999999860 0 12356777654 4 5789999
Q ss_pred EEEecCCCchhh
Q 013625 164 VVGADGGKSRVR 175 (439)
Q Consensus 164 vVgADG~~S~vR 175 (439)
||.|+|.+|.-+
T Consensus 158 VVvAtG~~s~p~ 169 (464)
T 2xve_A 158 VVCCTGHFSTPY 169 (464)
T ss_dssp EEECCCSSSSBC
T ss_pred EEECCCCCCCCc
Confidence 999999877654
No 96
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.78 E-value=0.15 Score=48.11 Aligned_cols=60 Identities=10% Similarity=0.092 Sum_probs=49.6
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+++..+...|.+.+.+.+ ++++++++|+++.. .++.+.|...+| ++.+|.||.|.|.+
T Consensus 85 ~~~~~~~~~l~~~~~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYE-LNIFENTVVTNISA--------------------DDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp CBHHHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred CCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEE--------------------CCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 566788888888888776 99999999999986 334677888777 68999999999998
Q ss_pred ch
Q 013625 172 SR 173 (439)
Q Consensus 172 S~ 173 (439)
+.
T Consensus 143 ~~ 144 (369)
T 3d1c_A 143 NF 144 (369)
T ss_dssp TS
T ss_pred Cc
Confidence 64
No 97
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=93.73 E-value=0.16 Score=50.23 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..+.+.|.+.+.+.|+++|+++++|++|+. .++++.|++.+|+++.||.||-|-|....
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVN--------------------ERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEE--------------------CSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEE--------------------cCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 356677788887775589999999999987 44668999999999999999999997544
No 98
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.60 E-value=0.13 Score=50.99 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch-
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 173 (439)
..+.+.+.+.+++.| |+|+++++|++++. +++.+.|.+.||+++.+|+||-|-|....
T Consensus 226 ~~~~~~~~~~l~~~G-V~v~~~~~V~~i~~--------------------~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 226 EYLSNWTMEKVRREG-VKVMPNAIVQSVGV--------------------SSGKLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp HHHHHHHHHHHHTTT-CEEECSCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHhcC-CEEEeCCEEEEEEe--------------------cCCeEEEEECCCCEEECCEEEECCCCCccH
Confidence 457778888888887 99999999999975 34567889999999999999999997654
Q ss_pred -hhhhhCCC
Q 013625 174 -VRELAGFK 181 (439)
Q Consensus 174 -vR~~l~~~ 181 (439)
+-+.+++.
T Consensus 285 ~l~~~~gl~ 293 (493)
T 1m6i_A 285 ELAKTGGLE 293 (493)
T ss_dssp TTHHHHTCC
T ss_pred HHHHHcCCc
Confidence 44455554
No 99
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.55 E-value=0.096 Score=48.59 Aligned_cols=61 Identities=15% Similarity=0.078 Sum_probs=49.3
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCccccccc--Cce-eEEEeCCCcEEEecEEEEe
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK--GHL-AKLDLSDGTSLYAKLVVGA 167 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~-v~v~~~dg~~~~adlvVgA 167 (439)
.+++..+...|.+.+.+.+ +++++ .+|+++.. . +.. +.|.+.+|.++.+|.||.|
T Consensus 61 ~~~~~~~~~~l~~~~~~~g-v~~~~-~~v~~i~~--------------------~~~~~~~~~v~~~~g~~~~~~~vv~A 118 (325)
T 2q7v_A 61 PIAGMELAQRMHQQAEKFG-AKVEM-DEVQGVQH--------------------DATSHPYPFTVRGYNGEYRAKAVILA 118 (325)
T ss_dssp CBCHHHHHHHHHHHHHHTT-CEEEE-CCEEEEEE--------------------CTTSSSCCEEEEESSCEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHcC-CEEEe-eeEEEEEe--------------------ccCCCceEEEEECCCCEEEeCEEEEC
Confidence 3677889999999888886 89988 58999976 1 222 6777788999999999999
Q ss_pred cCCCch
Q 013625 168 DGGKSR 173 (439)
Q Consensus 168 DG~~S~ 173 (439)
+|.++.
T Consensus 119 tG~~~~ 124 (325)
T 2q7v_A 119 TGADPR 124 (325)
T ss_dssp CCEEEC
T ss_pred cCCCcC
Confidence 998764
No 100
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.50 E-value=0.13 Score=51.15 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=49.1
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
.+.+.|.+.+++.| ++|+++++|++++. +++.+.+.+.+|+++.+|.||-|-|.++..
T Consensus 224 ~~~~~l~~~l~~~G-V~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 224 DAALVLEESFAERG-VRLFKNARAASVTR--------------------TGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHTT-CEEETTCCEEEEEE--------------------CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------------eCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 56778888888887 99999999999976 334588888899999999999999987654
No 101
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.50 E-value=0.11 Score=51.17 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC-C--Cc--EEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-D--GT--SLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d--g~--~~~adlvVgADG 169 (439)
..+.+.|.+.+++.| ++|+++++|++++. +++.+.|.++ + |+ ++.+|+||.|.|
T Consensus 210 ~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~--------------------~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G 268 (464)
T 2eq6_A 210 PETAALLRRALEKEG-IRVRTKTKAVGYEK--------------------KKDGLHVRLEPAEGGEGEEVVVDKVLVAVG 268 (464)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------ETTEEEEEEEETTCCSCEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHhcC-CEEEcCCEEEEEEE--------------------eCCEEEEEEeecCCCceeEEEcCEEEECCC
Confidence 456777888888877 99999999999976 3455778776 6 77 899999999999
Q ss_pred CCchhh
Q 013625 170 GKSRVR 175 (439)
Q Consensus 170 ~~S~vR 175 (439)
.++.+.
T Consensus 269 ~~p~~~ 274 (464)
T 2eq6_A 269 RKPRTE 274 (464)
T ss_dssp EEESCT
T ss_pred cccCCC
Confidence 877653
No 102
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=93.37 E-value=0.12 Score=50.93 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCc--
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS-- 172 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S-- 172 (439)
..+.+.|.+.+++.| ++|+.+++|++++. .++.+++.+.||+++.+|.||-|-|...
T Consensus 202 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 202 KSLSQMLRHDLEKND-VVVHTGEKVVRLEG--------------------ENGKVARVITDKRTLDADLVILAAGVSPNT 260 (472)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------SSSBEEEEEESSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhcC-CEEEeCCEEEEEEc--------------------cCCeEEEEEeCCCEEEcCEEEECCCCCcCH
Confidence 455677777788777 99999999999976 3466788899999999999999999854
Q ss_pred hhhhhhCCCC
Q 013625 173 RVRELAGFKT 182 (439)
Q Consensus 173 ~vR~~l~~~~ 182 (439)
.+-+.+|+..
T Consensus 261 ~l~~~~gl~~ 270 (472)
T 3iwa_A 261 QLARDAGLEL 270 (472)
T ss_dssp HHHHHHTCCB
T ss_pred HHHHhCCccC
Confidence 3445555543
No 103
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.33 E-value=0.17 Score=48.96 Aligned_cols=66 Identities=15% Similarity=0.097 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce-eEEEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..+.+.|.+.+++.| ++|+++++|++++. +++. ..|.++||+++.||+||-|-|....
T Consensus 194 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 194 EALSEFYQAEHRAHG-VDLRTGAAMDCIEG--------------------DGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETCCEEEEEE--------------------SSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred HHHHHHHHHHHHhCC-CEEEECCEEEEEEe--------------------cCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 566777888888887 99999999999976 2333 4788999999999999999998654
Q ss_pred h--hhhhCCC
Q 013625 174 V--RELAGFK 181 (439)
Q Consensus 174 v--R~~l~~~ 181 (439)
. -+..++.
T Consensus 253 ~~l~~~~gl~ 262 (415)
T 3lxd_A 253 VGALISAGAS 262 (415)
T ss_dssp CHHHHHTTCC
T ss_pred hHHHHhCCCC
Confidence 3 3444544
No 104
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.22 E-value=0.15 Score=47.14 Aligned_cols=60 Identities=12% Similarity=0.060 Sum_probs=47.9
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
.+.+..+...|.+.+.+.+ +++++ .+|+++.. .+..+.|.. ++.++.+|.||.|+|.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~--------------------~~~~~~v~~-~~~~~~~~~li~AtG~ 124 (319)
T 3cty_A 68 SIVGSELAKLFADHAANYA-KIREG-VEVRSIKK--------------------TQGGFDIET-NDDTYHAKYVIITTGT 124 (319)
T ss_dssp SBCHHHHHHHHHHHHHTTS-EEEET-CCEEEEEE--------------------ETTEEEEEE-SSSEEEEEEEEECCCE
T ss_pred ccCHHHHHHHHHHHHHHcC-CEEEE-eeEEEEEE--------------------eCCEEEEEE-CCCEEEeCEEEECCCC
Confidence 3567788888888888886 99988 68999976 335566766 6678999999999998
Q ss_pred Cch
Q 013625 171 KSR 173 (439)
Q Consensus 171 ~S~ 173 (439)
++.
T Consensus 125 ~~~ 127 (319)
T 3cty_A 125 THK 127 (319)
T ss_dssp EEC
T ss_pred Ccc
Confidence 654
No 105
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.21 E-value=0.15 Score=49.12 Aligned_cols=67 Identities=27% Similarity=0.311 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC-ceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG-HLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..+.+.|.+.+++.| ++|+++++|++++. ++ ....|.++||+++.||+||-|-|....
T Consensus 184 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 184 PEISSYFHDRHSGAG-IRMHYGVRATEIAA--------------------EGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------ETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCC-cEEEECCEEEEEEe--------------------cCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 456777888888877 99999999999976 22 334688999999999999999998543
Q ss_pred --hhhhhCCCC
Q 013625 174 --VRELAGFKT 182 (439)
Q Consensus 174 --vR~~l~~~~ 182 (439)
+-+.+++..
T Consensus 243 ~~l~~~~gl~~ 253 (404)
T 3fg2_P 243 VEIAAAAGLPT 253 (404)
T ss_dssp CHHHHHTTCCB
T ss_pred HHHHHhCCCCC
Confidence 445555543
No 106
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.07 E-value=0.17 Score=50.65 Aligned_cols=64 Identities=22% Similarity=0.333 Sum_probs=52.3
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
..+..+...|.+.+.+.+ ++++.+++|+++.. +.. .++.++|.+++|.++.+|.||.|+|.+
T Consensus 264 ~~~~~l~~~l~~~~~~~g-v~v~~~~~v~~i~~---------~~~--------~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYD-VDVIDSQSASKLVP---------AAT--------EGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp BCHHHHHHHHHHHHHTSC-EEEECSCCEEEEEC---------CSS--------TTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEcCCEEEEEEe---------ccC--------CCceEEEEECCCCEEEcCEEEECCCCC
Confidence 567888999999998886 99999999999965 000 124688889999999999999999987
Q ss_pred ch
Q 013625 172 SR 173 (439)
Q Consensus 172 S~ 173 (439)
+.
T Consensus 326 ~~ 327 (521)
T 1hyu_A 326 WR 327 (521)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 107
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.04 E-value=0.13 Score=47.42 Aligned_cols=60 Identities=15% Similarity=0.244 Sum_probs=48.5
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+.+..+...|.+.+.+.+ +++++++ |++++. ....+++ +.+|.++.+|.||.|+|.+
T Consensus 59 ~~~~~~~~~~~~~~~~~~-~~~~~~~-v~~i~~--------------------~~~~~~v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFE-TEIIFDH-INKVDL--------------------QNRPFRL-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp CBHHHHHHHHHHHHHHTT-CEEECCC-EEEEEC--------------------SSSSEEE-EESSCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHCC-CEEEEee-eeEEEe--------------------cCCEEEE-EeCCCEEEcCEEEECCCCC
Confidence 567888888888888876 9999996 888875 3355666 6788899999999999987
Q ss_pred chh
Q 013625 172 SRV 174 (439)
Q Consensus 172 S~v 174 (439)
+.+
T Consensus 116 ~~~ 118 (320)
T 1trb_A 116 ARY 118 (320)
T ss_dssp ECC
T ss_pred cCC
Confidence 643
No 108
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=92.95 E-value=0.12 Score=49.80 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch-
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 173 (439)
..+.+.|.+.+++.| ++|+++++|.+++. ++....|.++||+++.+|+||-|-|.+..
T Consensus 185 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 185 RRIGAWLRGLLTELG-VQVELGTGVVGFSG--------------------EGQLEQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEEEC--------------------SSSCCEEEETTSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEec--------------------cCcEEEEEECCCCEEEcCEEEEeeCCeecH
Confidence 445667777777776 99999999999975 33445788999999999999999998654
Q ss_pred -hhhhhCCCC
Q 013625 174 -VRELAGFKT 182 (439)
Q Consensus 174 -vR~~l~~~~ 182 (439)
+-+.+|+..
T Consensus 244 ~l~~~~gl~~ 253 (410)
T 3ef6_A 244 QLARQAGLAC 253 (410)
T ss_dssp HHHHHTTCCB
T ss_pred HHHHhCCCcc
Confidence 445555543
No 109
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.68 E-value=0.16 Score=50.84 Aligned_cols=67 Identities=15% Similarity=0.169 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce----eEEEeCCCc-EEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL----AKLDLSDGT-SLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----v~v~~~dg~-~~~adlvVgADG 169 (439)
..+.+.|.+.+++.| ++|+.+++|++++. .+++ +.|.+++|+ ++.+|.||-|-|
T Consensus 255 ~~~~~~l~~~l~~~G-V~i~~~~~V~~i~~--------------------~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G 313 (523)
T 1mo9_A 255 NETRAYVLDRMKEQG-MEIISGSNVTRIEE--------------------DANGRVQAVVAMTPNGEMRIETDFVFLGLG 313 (523)
T ss_dssp HHHHHHHHHHHHHTT-CEEESSCEEEEEEE--------------------CTTSBEEEEEEEETTEEEEEECSCEEECCC
T ss_pred HHHHHHHHHHHHhCC-cEEEECCEEEEEEE--------------------cCCCceEEEEEEECCCcEEEEcCEEEECcC
Confidence 466778888888887 99999999999976 2223 778888998 899999999999
Q ss_pred CCchhh---hhhCCCC
Q 013625 170 GKSRVR---ELAGFKT 182 (439)
Q Consensus 170 ~~S~vR---~~l~~~~ 182 (439)
.++..- +.+|+..
T Consensus 314 ~~p~~~~~l~~~gl~~ 329 (523)
T 1mo9_A 314 EQPRSAELAKILGLDL 329 (523)
T ss_dssp CEECCHHHHHHHTCCB
T ss_pred CccCCccCHHHcCCcc
Confidence 877653 4455543
No 110
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.51 E-value=0.21 Score=46.29 Aligned_cols=62 Identities=13% Similarity=0.126 Sum_probs=51.7
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe---CCCcEEEecEEEEe
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGTSLYAKLVVGA 167 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~~~~adlvVgA 167 (439)
.+.+..+...|.+.+.+.+ +++++++ |+++.. ....+.+.+ .++.++.+|.||.|
T Consensus 80 ~~~~~~~~~~~~~~~~~~g-v~i~~~~-v~~i~~--------------------~~~~~~v~~~~~~~~~~~~~d~vvlA 137 (338)
T 3itj_A 80 GLTGSELMDRMREQSTKFG-TEIITET-VSKVDL--------------------SSKPFKLWTEFNEDAEPVTTDAIILA 137 (338)
T ss_dssp CEEHHHHHHHHHHHHHHTT-CEEECSC-EEEEEC--------------------SSSSEEEEETTCSSSCCEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcC-CEEEEeE-EEEEEE--------------------cCCEEEEEEEecCCCcEEEeCEEEEC
Confidence 3678899999999999886 9999998 999976 446688877 46789999999999
Q ss_pred cCCCchh
Q 013625 168 DGGKSRV 174 (439)
Q Consensus 168 DG~~S~v 174 (439)
.|.++..
T Consensus 138 tG~~~~~ 144 (338)
T 3itj_A 138 TGASAKR 144 (338)
T ss_dssp CCEEECC
T ss_pred cCCCcCC
Confidence 9986543
No 111
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.39 E-value=0.23 Score=49.24 Aligned_cols=59 Identities=12% Similarity=0.063 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC-ceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG-HLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..+.+.|.+.+++.| ++|+++++|++++. ++ +.+.|.+++|+++.+|.||-|-|.+..
T Consensus 231 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 231 SELRKQLTEQLRANG-INVRTHENPAKVTK--------------------NADGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHHTT-EEEEETCCEEEEEE--------------------CTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCC-CEEEeCCEEEEEEE--------------------cCCCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 356777888888887 99999999999976 22 347888999999999999999998765
Q ss_pred h
Q 013625 174 V 174 (439)
Q Consensus 174 v 174 (439)
.
T Consensus 290 ~ 290 (490)
T 1fec_A 290 S 290 (490)
T ss_dssp C
T ss_pred c
Confidence 4
No 112
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=92.31 E-value=0.2 Score=46.67 Aligned_cols=61 Identities=18% Similarity=0.106 Sum_probs=48.7
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEE-EeCCCcEEEecEEEEecC
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKL-DLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-~~~dg~~~~adlvVgADG 169 (439)
.+.+..+...|.+.+.+.+ +++++++ |++++. .+.++| .+++|.++.+|.||.|+|
T Consensus 67 ~~~~~~~~~~l~~~~~~~~-v~~~~~~-v~~i~~---------------------~~~~~v~~~~~g~~~~~d~lviAtG 123 (335)
T 2a87_A 67 GITGPELMDEMREQALRFG-ADLRMED-VESVSL---------------------HGPLKSVVTADGQTHRARAVILAMG 123 (335)
T ss_dssp CBCHHHHHHHHHHHHHHTT-CEEECCC-EEEEEC---------------------SSSSEEEEETTSCEEEEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcC-CEEEEee-EEEEEe---------------------CCcEEEEEeCCCCEEEeCEEEECCC
Confidence 3677888888888888876 9999997 888853 134666 778888999999999999
Q ss_pred CCchh
Q 013625 170 GKSRV 174 (439)
Q Consensus 170 ~~S~v 174 (439)
.++.+
T Consensus 124 ~~~~~ 128 (335)
T 2a87_A 124 AAARY 128 (335)
T ss_dssp EEECC
T ss_pred CCccC
Confidence 87643
No 113
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.25 E-value=0.25 Score=49.06 Aligned_cols=60 Identities=12% Similarity=0.179 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
.++.+.|.+.+++.| ++|+++++|++++. +.++.+.|.+.+|+++.+|+||-|-|.+..+
T Consensus 235 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~-------------------~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 235 ETIREEVTKQLTANG-IEIMTNENPAKVSL-------------------NTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESCCEEEEEE-------------------CTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-------------------cCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 356677888888887 99999999999976 0123478889999999999999999987654
No 114
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.18 E-value=0.55 Score=43.91 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=43.1
Q ss_pred eeeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEec
Q 013625 89 GCVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGAD 168 (439)
Q Consensus 89 ~~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgAD 168 (439)
+..++...+.+.|.+.+++.| ++|+. ++|++++. .+ .+.||.||.|+
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~G-v~i~~-~~V~~i~~--------------------~~-----------~~~a~~VV~A~ 182 (351)
T 3g3e_A 136 SLILEGKNYLQWLTERLTERG-VKFFQ-RKVESFEE--------------------VA-----------REGADVIVNCT 182 (351)
T ss_dssp EEEECHHHHHHHHHHHHHHTT-CEEEE-CCCCCHHH--------------------HH-----------HTTCSEEEECC
T ss_pred ceEEcHHHHHHHHHHHHHHCC-CEEEE-EEeCCHHH--------------------hh-----------cCCCCEEEECC
Confidence 356888999999999999987 99988 89988864 11 15699999999
Q ss_pred CCCch
Q 013625 169 GGKSR 173 (439)
Q Consensus 169 G~~S~ 173 (439)
|.+|.
T Consensus 183 G~~s~ 187 (351)
T 3g3e_A 183 GVWAG 187 (351)
T ss_dssp GGGGG
T ss_pred CcChH
Confidence 99995
No 115
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=92.12 E-value=0.21 Score=49.06 Aligned_cols=57 Identities=9% Similarity=-0.059 Sum_probs=45.3
Q ss_pred HHHHHHHHHhhcC-------CCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEec
Q 013625 96 VLHSSLLSCMQNT-------EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGAD 168 (439)
Q Consensus 96 ~l~~~L~~~~~~~-------~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgAD 168 (439)
.|.+.|.+.+.+. .+++|+++++|++|+. .+++++|++.+|+++.||.||.|.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~ad~vI~a~ 266 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY--------------------SPGGVTVKTEDNSVYSADYVMVSA 266 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE--------------------CSSCEEEEETTSCEEEESEEEECS
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEE--------------------cCCcEEEEECCCCEEEcCEEEEec
Confidence 5666676666543 1268999999999987 446688999999999999999999
Q ss_pred CCCc
Q 013625 169 GGKS 172 (439)
Q Consensus 169 G~~S 172 (439)
+...
T Consensus 267 ~~~~ 270 (472)
T 1b37_A 267 SLGV 270 (472)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 9643
No 116
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=92.07 E-value=0.28 Score=48.20 Aligned_cols=58 Identities=10% Similarity=0.127 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
..|-+.|.+.+.+.| ++|+.+++|++|.. ++ ++..+.|.+.+|+++.||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~G-g~i~l~t~V~~I~~---------d~---------~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAING-GTFMLNKNVVDFVF---------DD---------DNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC---CEESSCCEEEEEE---------CT---------TSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCeEEEEEE---------ec---------CCeEEEEEECCCcEEECCEEEECCCcc
Confidence 577788888888887 99999999999976 10 234567889999999999999999977
No 117
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=92.00 E-value=0.21 Score=49.33 Aligned_cols=59 Identities=10% Similarity=0.102 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc--eeEEEeCCC-cEEEecEEEEecCCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH--LAKLDLSDG-TSLYAKLVVGADGGK 171 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~v~v~~~dg-~~~~adlvVgADG~~ 171 (439)
..+.+.|.+.+++.| ++|+++++|++++. .++ .+.|.++|| +++.+|.||-|-|.+
T Consensus 226 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 226 ECIQNTITDHYVKEG-INVHKLSKIVKVEK--------------------NVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEEEE--------------------CC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCC-eEEEeCCEEEEEEE--------------------cCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 456777888888777 99999999999976 222 378889999 799999999999986
Q ss_pred chh
Q 013625 172 SRV 174 (439)
Q Consensus 172 S~v 174 (439)
...
T Consensus 285 p~~ 287 (479)
T 2hqm_A 285 SHL 287 (479)
T ss_dssp ECC
T ss_pred Ccc
Confidence 654
No 118
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.98 E-value=0.38 Score=44.09 Aligned_cols=60 Identities=12% Similarity=0.103 Sum_probs=50.8
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+....+...|.+.+.+.+ +++++ .+|+++.. +++.+.+..++|.++.+|.||-|.|..
T Consensus 67 ~~~~~~~~~~~~~~~~~~-v~~~~-~~v~~i~~--------------------~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYE-VPVLL-DIVEKIEN--------------------RGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp EEHHHHHHHHHHHHHTTT-CCEEE-SCEEEEEE--------------------C--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHHcC-CEEEE-EEEEEEEe--------------------cCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 677889999999998886 89999 89999987 446688999999999999999999988
Q ss_pred ch
Q 013625 172 SR 173 (439)
Q Consensus 172 S~ 173 (439)
..
T Consensus 125 ~~ 126 (323)
T 3f8d_A 125 RR 126 (323)
T ss_dssp EC
T ss_pred Cc
Confidence 43
No 119
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.72 E-value=0.39 Score=47.65 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcE-EEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTS-LYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~-~~adlvVgADG~~S~ 173 (439)
..+...|.+.+++.| ++|+++++|++++. +.++.+.|.++||++ +.+|+||-|-|....
T Consensus 217 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNN-INIVTFADVVEIKK-------------------VSDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE-------------------SSTTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCC-CEEEECCEEEEEEE-------------------cCCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 567778888888887 99999999999976 012347888999988 999999999998766
Q ss_pred h
Q 013625 174 V 174 (439)
Q Consensus 174 v 174 (439)
.
T Consensus 277 ~ 277 (500)
T 1onf_A 277 T 277 (500)
T ss_dssp T
T ss_pred C
Confidence 4
No 120
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.64 E-value=0.44 Score=46.51 Aligned_cols=57 Identities=7% Similarity=0.014 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..+.+.|.+.+++.| ++|+.+++|++++. .++.+.|.+++| ++.+|.||-|-|.+..
T Consensus 189 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQA-VIFHFEETVLGIEE--------------------TANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp HHHHHHHHHHHHTTT-EEEEETCCEEEEEE--------------------CSSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCEEEEEEc--------------------cCCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 456677888888887 99999999999975 335568888877 8999999999998643
No 121
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=91.49 E-value=0.28 Score=48.24 Aligned_cols=59 Identities=12% Similarity=0.275 Sum_probs=45.3
Q ss_pred HHHHHHHHHHh-hcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC--CC--cEEEecEEEEecC
Q 013625 95 KVLHSSLLSCM-QNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS--DG--TSLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~-~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg--~~~~adlvVgADG 169 (439)
.++.+.|.+.+ ++.| ++|+++++|++++. +++.+.+.++ +| +++.+|.||-|-|
T Consensus 215 ~~~~~~l~~~l~~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~~~g~~~~i~~D~vv~a~G 273 (468)
T 2qae_A 215 EDVTNALVGALAKNEK-MKFMTSTKVVGGTN--------------------NGDSVSLEVEGKNGKRETVTCEALLVSVG 273 (468)
T ss_dssp HHHHHHHHHHHHHHTC-CEEECSCEEEEEEE--------------------CSSSEEEEEECC---EEEEEESEEEECSC
T ss_pred HHHHHHHHHHHhhcCC-cEEEeCCEEEEEEE--------------------cCCeEEEEEEcCCCceEEEECCEEEECCC
Confidence 35667788888 7776 99999999999976 3344677765 67 6899999999999
Q ss_pred CCchh
Q 013625 170 GKSRV 174 (439)
Q Consensus 170 ~~S~v 174 (439)
.++..
T Consensus 274 ~~p~~ 278 (468)
T 2qae_A 274 RRPFT 278 (468)
T ss_dssp EEECC
T ss_pred cccCC
Confidence 87654
No 122
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=90.97 E-value=0.24 Score=48.43 Aligned_cols=65 Identities=11% Similarity=0.141 Sum_probs=50.0
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc--eeEEEeCCCc----EEEecEE
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH--LAKLDLSDGT----SLYAKLV 164 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~v~v~~~dg~----~~~adlv 164 (439)
...|..+...|...+.+.+ ++|+++++|++++.+ .+ .+. .++|++.+|. ++.+|.|
T Consensus 123 ~~~~~~~~~~l~~~~~~~~-~~i~~~~~V~~i~~~---------~~--------~~~~~~~~V~~~~g~g~~~~~~~d~l 184 (463)
T 3s5w_A 123 YPCRMEFNDYLRWVASHFQ-EQSRYGEEVLRIEPM---------LS--------AGQVEALRVISRNADGEELVRTTRAL 184 (463)
T ss_dssp CCBHHHHHHHHHHHHTTCT-TTEEESEEEEEEEEE---------EE--------TTEEEEEEEEEEETTSCEEEEEESEE
T ss_pred CCCHHHHHHHHHHHHHHcC-CeEEeCCEEEEEEEe---------cC--------CCceEEEEEEEecCCCceEEEEeCEE
Confidence 3578899999988888876 899999999999760 00 012 2577777776 8999999
Q ss_pred EEecCCCch
Q 013625 165 VGADGGKSR 173 (439)
Q Consensus 165 VgADG~~S~ 173 (439)
|.|+|....
T Consensus 185 VlAtG~~p~ 193 (463)
T 3s5w_A 185 VVSPGGTPR 193 (463)
T ss_dssp EECCCCEEC
T ss_pred EECCCCCCC
Confidence 999998544
No 123
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=90.82 E-value=0.25 Score=48.77 Aligned_cols=59 Identities=8% Similarity=-0.024 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC----CcEEEecEEEEecCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD----GTSLYAKLVVGADGG 170 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~~~~adlvVgADG~ 170 (439)
.++.+.|.+.+++.| ++|+++++|++++. +++.+.|.+.| |+++.+|.||-|-|.
T Consensus 226 ~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~--------------------~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 226 RDLVKVWQKQNEYRF-DNIMVNTKTVAVEP--------------------KEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp HHHHHHHHHHHGGGE-EEEECSCEEEEEEE--------------------ETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred HHHHHHHHHHHHhcC-CEEEECCEEEEEEE--------------------cCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 456677788888776 99999999999976 33567788877 788999999999998
Q ss_pred Cchh
Q 013625 171 KSRV 174 (439)
Q Consensus 171 ~S~v 174 (439)
+..+
T Consensus 285 ~p~~ 288 (482)
T 1ojt_A 285 APNG 288 (482)
T ss_dssp EECG
T ss_pred CcCC
Confidence 7654
No 124
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.75 E-value=0.25 Score=48.39 Aligned_cols=59 Identities=7% Similarity=0.090 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC---CCcEEEecEEEEecCCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DGTSLYAKLVVGADGGK 171 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~~~~adlvVgADG~~ 171 (439)
..+.+.|.+.+.+.| ++|+++++|++++. +++.+.+.++ +++++.+|.||-|.|.+
T Consensus 211 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKG-VEVVTNALAKGAEE--------------------REDGVTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESEEEEEEEE--------------------ETTEEEEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------------eCCeEEEEEEeCCceeEEEcCEEEECcCCC
Confidence 356677888888877 99999999999976 3345777765 45689999999999987
Q ss_pred chh
Q 013625 172 SRV 174 (439)
Q Consensus 172 S~v 174 (439)
...
T Consensus 270 p~~ 272 (455)
T 1ebd_A 270 PNT 272 (455)
T ss_dssp ESC
T ss_pred ccc
Confidence 654
No 125
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=90.00 E-value=0.64 Score=46.19 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=44.5
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC-CCc--EEEec-EEEEecCCC
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-DGT--SLYAK-LVVGADGGK 171 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg~--~~~ad-lvVgADG~~ 171 (439)
.+...|.+.+++.+ ++|+++++|+++..+ . ++..+.|... +|. ++.|| .||-|.|..
T Consensus 203 ~l~~~L~~~~~~~G-v~i~~~t~v~~L~~~---------~---------~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLG-VRAEYDMRVQTLVTD---------D---------TGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTT-CEEECSEEEEEEEEC---------T---------TCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcC-CEEEecCEeEEEEEC---------C---------CCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 89999999999886 999999999999871 0 1222334443 332 69995 999999998
Q ss_pred ch
Q 013625 172 SR 173 (439)
Q Consensus 172 S~ 173 (439)
|.
T Consensus 264 ~~ 265 (510)
T 4at0_A 264 AY 265 (510)
T ss_dssp TT
T ss_pred hh
Confidence 84
No 126
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.77 E-value=0.36 Score=47.41 Aligned_cols=59 Identities=15% Similarity=0.226 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC---CC--cEEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DG--TSLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg--~~~~adlvVgADG 169 (439)
..+.+.|.+.+++.| ++|+++++|++++. +++.+.+.++ +| +++.+|.||-|.|
T Consensus 218 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 276 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQG-MKFKLKTKVVGVDT--------------------SGDGVKLTVEPSAGGEQTIIEADVVLVSAG 276 (470)
T ss_dssp HHHHHHHHHHHHHSS-CCEECSEEEEEEEC--------------------SSSSEEEEEEESSSCCCEEEEESEEECCCC
T ss_pred HHHHHHHHHHHHHcC-CEEEeCCEEEEEEE--------------------cCCeEEEEEEecCCCcceEEECCEEEECCC
Confidence 456777888888887 99999999999975 3344667765 55 6899999999999
Q ss_pred CCchh
Q 013625 170 GKSRV 174 (439)
Q Consensus 170 ~~S~v 174 (439)
.....
T Consensus 277 ~~p~~ 281 (470)
T 1dxl_A 277 RTPFT 281 (470)
T ss_dssp EEECC
T ss_pred CCcCC
Confidence 87654
No 127
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=89.62 E-value=0.28 Score=48.07 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC--cEEEecEEEEecCCCc
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKS 172 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S 172 (439)
..+.+.|.+.+.+.+ ++++.++.+. + +...++|.+.+| .++.+|.||.|+|.++
T Consensus 91 ~~l~~~l~~~~~~~g-v~~~~g~~~~-i----------------------d~~~v~V~~~~G~~~~~~~d~lViAtG~~~ 146 (464)
T 2a8x_A 91 EGRVAGVHFLMKKNK-ITEIHGYGTF-A----------------------DANTLLVDLNDGGTESVTFDNAIIATGSST 146 (464)
T ss_dssp HHHHHHHHHHHHHTT-CEEECEEEEE-S----------------------SSSEEEEEETTSCCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCC-CEEEEeEEEE-e----------------------cCCeEEEEeCCCceEEEEcCEEEECCCCCC
Confidence 345566677776665 9999987654 3 236688888888 6899999999999988
Q ss_pred hhhh
Q 013625 173 RVRE 176 (439)
Q Consensus 173 ~vR~ 176 (439)
.+..
T Consensus 147 ~~~~ 150 (464)
T 2a8x_A 147 RLVP 150 (464)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 6543
No 128
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=89.58 E-value=0.51 Score=46.34 Aligned_cols=59 Identities=8% Similarity=0.103 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce-eEEEe-----CCCcEEEecEEEEec
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDL-----SDGTSLYAKLVVGAD 168 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~-----~dg~~~~adlvVgAD 168 (439)
.++.+.|.+.+++.| ++|+++++|++++. +++. +.+.+ .+++++.+|.||-|.
T Consensus 220 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~ 278 (474)
T 1zmd_A 220 MEISKNFQRILQKQG-FKFKLNTKVTGATK--------------------KSDGKIDVSIEAASGGKAEVITCDVLLVCI 278 (474)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------CTTSCEEEEEEETTSCCCEEEEESEEEECS
T ss_pred HHHHHHHHHHHHHCC-CEEEeCceEEEEEE--------------------cCCceEEEEEEecCCCCceEEEcCEEEECc
Confidence 456677888888887 99999999999976 2233 66664 466789999999999
Q ss_pred CCCchh
Q 013625 169 GGKSRV 174 (439)
Q Consensus 169 G~~S~v 174 (439)
|.+...
T Consensus 279 G~~p~~ 284 (474)
T 1zmd_A 279 GRRPFT 284 (474)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 987654
No 129
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=89.52 E-value=0.94 Score=45.89 Aligned_cols=61 Identities=16% Similarity=0.109 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc--eeEEEe-CCCc--EEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH--LAKLDL-SDGT--SLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~v~v~~-~dg~--~~~adlvVgADG 169 (439)
..+...|.+.+.+.+ ++|++++.|+++..+ + ++. ++.+.- .+|+ ++.|+.||.|+|
T Consensus 143 ~~l~~~L~~~~~~~g-v~i~~~~~v~~L~~~---------~---------~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtG 203 (588)
T 2wdq_A 143 HALLHTLYQQNLKNH-TTIFSEWYALDLVKN---------Q---------DGAVVGCTALCIETGEVVYFKARATVLATG 203 (588)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETEEEEEEEEC---------T---------TSCEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhCC-CEEEeCcEEEEEEEC---------C---------CCEEEEEEEEEcCCCeEEEEEcCEEEECCC
Confidence 578888999998886 999999999999860 0 112 233332 5675 689999999999
Q ss_pred CCchh
Q 013625 170 GKSRV 174 (439)
Q Consensus 170 ~~S~v 174 (439)
..|.+
T Consensus 204 g~~~~ 208 (588)
T 2wdq_A 204 GAGRI 208 (588)
T ss_dssp CCGGG
T ss_pred CCccc
Confidence 99875
No 130
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=89.50 E-value=0.24 Score=48.19 Aligned_cols=58 Identities=7% Similarity=-0.051 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..+-+.|.+.+.+.| ++|+++++|++|.. .++.+.....+|.++.||.||.|-|.++.
T Consensus 234 ~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~--------------------~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYG-GTYMLNKPVDDIIM--------------------ENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHT-CCCBCSCCCCEEEE--------------------ETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------eCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 467778888887777 89999999999987 34555544458889999999999999874
No 131
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=89.18 E-value=0.23 Score=48.97 Aligned_cols=61 Identities=16% Similarity=0.071 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCcee-EEEe--CCCcEEEecEEEEecCC
Q 013625 94 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDL--SDGTSLYAKLVVGADGG 170 (439)
Q Consensus 94 R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~--~dg~~~~adlvVgADG~ 170 (439)
...+.+.|.+.+++.+ ++|+.+++| ++.. +++.+ .+.. .+| ++.+|.||.|+|.
T Consensus 118 g~~l~~~L~~~~~~~g-v~i~~~~~v-~l~~--------------------~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg 174 (472)
T 2e5v_A 118 GREIFNFLLKLAREEG-IPIIEDRLV-EIRV--------------------KDGKVTGFVTEKRGL-VEDVDKLVLATGG 174 (472)
T ss_dssp HHHHHHHHHHHHHHTT-CCEECCCEE-EEEE--------------------ETTEEEEEEETTTEE-ECCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHhCC-CEEEECcEE-EEEE--------------------eCCEEEEEEEEeCCC-eEEeeeEEECCCC
Confidence 4678888998886665 999999999 9976 22333 3333 334 5779999999999
Q ss_pred Cchhhhh
Q 013625 171 KSRVREL 177 (439)
Q Consensus 171 ~S~vR~~ 177 (439)
+|.++..
T Consensus 175 ~~~~~~~ 181 (472)
T 2e5v_A 175 YSYLYEY 181 (472)
T ss_dssp CGGGSSS
T ss_pred CcccCcc
Confidence 9998754
No 132
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=89.06 E-value=0.6 Score=45.71 Aligned_cols=58 Identities=14% Similarity=0.168 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCccccccc-CceeEEE-eCCCcEEEecEEEEecCCCc
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GHLAKLD-LSDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~-~~dg~~~~adlvVgADG~~S 172 (439)
..+.+.|.+.+++.| ++|+.+++|.+++. + ++.+.|. +++|+ +.+|.||-|-|.+.
T Consensus 211 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKG-IRILCEDIIQSVSA--------------------DADGRRVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------CTTSCEEEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCC-CEEECCCEEEEEEE--------------------cCCCEEEEEEcCCCe-EEeCEEEEeeCccc
Confidence 456777888888887 99999999999976 2 2336888 89998 99999999999865
Q ss_pred hh
Q 013625 173 RV 174 (439)
Q Consensus 173 ~v 174 (439)
..
T Consensus 269 ~~ 270 (463)
T 4dna_A 269 NT 270 (463)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 133
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=88.82 E-value=0.59 Score=45.32 Aligned_cols=70 Identities=14% Similarity=0.172 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch-
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 173 (439)
..+.+.|.+.+++.| ++|+++++|++++. ..+ ++....|.++||+++.+|+||-|-|....
T Consensus 191 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~---------~~~--------~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 191 PPVSAFYEHLHREAG-VDIRTGTQVCGFEM---------STD--------QQKVTAVLCEDGTRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEEEE---------CTT--------TCCEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHhCC-eEEEeCCEEEEEEe---------ccC--------CCcEEEEEeCCCCEEEcCEEEECCCCCcCc
Confidence 456667778887777 99999999999964 000 12333688899999999999999997543
Q ss_pred -hhhhhCCCC
Q 013625 174 -VRELAGFKT 182 (439)
Q Consensus 174 -vR~~l~~~~ 182 (439)
+-+.+++..
T Consensus 253 ~l~~~~gl~~ 262 (431)
T 1q1r_A 253 ELASAAGLQV 262 (431)
T ss_dssp HHHHHTTCCB
T ss_pred chhhccCCCC
Confidence 445555543
No 134
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=88.74 E-value=1.1 Score=45.62 Aligned_cols=60 Identities=22% Similarity=0.151 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc--eeEEEe-CCCc--EEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH--LAKLDL-SDGT--SLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~v~v~~-~dg~--~~~adlvVgADG 169 (439)
..+...|.+.+.+.+ ++|+.++.|+++.. +++. ++.+.. .+|+ ++.|+.||.|.|
T Consensus 155 ~~l~~~L~~~~~~~g-v~i~~~~~v~~Li~-------------------~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATG 214 (621)
T 2h88_A 155 HSLLHTLYGRSLRYD-TSYFVEYFALDLLM-------------------ENGECRGVIALCIEDGTIHRFRAKNTVIATG 214 (621)
T ss_dssp HHHHHHHHHHHTTSC-CEEEETEEEEEEEE-------------------ETTEEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhCC-CEEEEceEEEEEEE-------------------ECCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 478889999998876 99999999999986 0122 233332 5675 799999999999
Q ss_pred CCchh
Q 013625 170 GKSRV 174 (439)
Q Consensus 170 ~~S~v 174 (439)
..|.+
T Consensus 215 G~~~~ 219 (621)
T 2h88_A 215 GYGRT 219 (621)
T ss_dssp CCGGG
T ss_pred ccccc
Confidence 99975
No 135
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=88.62 E-value=0.38 Score=48.24 Aligned_cols=69 Identities=19% Similarity=0.140 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe---CCCc--EEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGT--SLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~--~~~adlvVgADG 169 (439)
..+.+.|.+.+.+..+++|++++.|+++..+.+.... . .+....|.. .+|+ ++.|+.||.|+|
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~-----~-------~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 205 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLP-----G-------TRRVVGAWVWNRNKETVETCHAKAVVLATG 205 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCC-----S-------SCBEEEEEEEETTTTEEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcc-----c-------CCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 5677788888887445999999999999761000000 0 002222433 3675 799999999999
Q ss_pred CCchhh
Q 013625 170 GKSRVR 175 (439)
Q Consensus 170 ~~S~vR 175 (439)
..|.+-
T Consensus 206 g~~~~~ 211 (540)
T 1chu_A 206 GASKVY 211 (540)
T ss_dssp CCGGGS
T ss_pred Cccccc
Confidence 999863
No 136
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=88.37 E-value=0.81 Score=46.01 Aligned_cols=85 Identities=14% Similarity=0.115 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch-
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 173 (439)
..+...|.+.+++.| ++++++++|++++..+............. .....++.+.+.+.+|+++.+|.||-|-|....
T Consensus 192 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 192 REMAGFAHQAIRDQG-VDLRLGTALSEVSYQVQTHVASDAAGEDT-AHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETCCEEEEEEECCCCCCCGGGTCCC-TTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCeEEEEecccccccccccccccc-ccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 466777888888877 99999999999975211000000000000 000023667888899999999999999998654
Q ss_pred -hhhhhCCC
Q 013625 174 -VRELAGFK 181 (439)
Q Consensus 174 -vR~~l~~~ 181 (439)
+-+.+|+.
T Consensus 270 ~l~~~~g~~ 278 (565)
T 3ntd_A 270 QLARDAGLA 278 (565)
T ss_dssp HHHHHHTCC
T ss_pred HHHHhCCcc
Confidence 33445544
No 137
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=88.33 E-value=0.78 Score=44.89 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC-CC--cEEEecEEEEecCCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-DG--TSLYAKLVVGADGGK 171 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg--~~~~adlvVgADG~~ 171 (439)
.++.+.|.+.+++.| ++|+++++|++++. +++.+.+.++ +| +++.+|.||-|-|..
T Consensus 212 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLG-VTILTATKVESIAD--------------------GGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCEEEEEEE--------------------CSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHcC-CEEEeCcEEEEEEE--------------------cCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 356667777787777 99999999999976 3345777775 67 689999999999986
Q ss_pred chh
Q 013625 172 SRV 174 (439)
Q Consensus 172 S~v 174 (439)
...
T Consensus 271 p~~ 273 (464)
T 2a8x_A 271 PNV 273 (464)
T ss_dssp ECC
T ss_pred ccC
Confidence 543
No 138
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=88.10 E-value=1.2 Score=43.40 Aligned_cols=59 Identities=10% Similarity=0.082 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
..+.+.|.+.+++.| ++|+++++|++++. .++.+.....+|+++.+|.||-|-|.....
T Consensus 191 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 191 KEFTDILAKDYEAHG-VNLVLGSKVAAFEE--------------------VDDEIITKTLDGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESSCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred hhHHHHHHHHHHHCC-CEEEcCCeeEEEEc--------------------CCCeEEEEEeCCCEEECCEEEECcCCCCCH
Confidence 456677888888887 99999999999975 234454333478899999999999986553
No 139
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=87.78 E-value=1.1 Score=44.09 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC---cEEEecEEEEecCCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG---TSLYAKLVVGADGGK 171 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg---~~~~adlvVgADG~~ 171 (439)
..+.+.|.+.+++.| ++|+.+++|++++. +++.+.+.+.++ +++.+|.||-|-|..
T Consensus 221 ~~~~~~l~~~l~~~G-v~v~~~~~v~~i~~--------------------~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 221 EQVAKEAQKILTKQG-LKILLGARVTGTEV--------------------KNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHHHTT-EEEEETCEEEEEEE--------------------CSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCC-CEEEECCEEEEEEE--------------------cCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 456677777787776 99999999999986 445677777755 689999999999976
Q ss_pred chh
Q 013625 172 SRV 174 (439)
Q Consensus 172 S~v 174 (439)
...
T Consensus 280 p~~ 282 (476)
T 3lad_A 280 PVT 282 (476)
T ss_dssp ECC
T ss_pred ccC
Confidence 543
No 140
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=87.63 E-value=0.92 Score=44.42 Aligned_cols=58 Identities=10% Similarity=0.086 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
..+.+.|.+.+++.| ++|+.+++|++++. ++..+.|.++ +.++.+|.||-|-|.++..
T Consensus 216 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEG-IEVLEHTQASQVAH--------------------MDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp HHHHHHHHHHHHHTT-CEEETTCCEEEEEE--------------------ETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCC-CEEEcCCEEEEEEE--------------------eCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 457778888888887 99999999999976 3455667776 4589999999999987764
No 141
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=87.61 E-value=0.8 Score=45.18 Aligned_cols=59 Identities=22% Similarity=0.238 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC---C--cEEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---G--TSLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g--~~~~adlvVgADG 169 (439)
..+.+.|.+.+.+.+ ++|+.+++|++++. +++.+.+.+++ | +++.+|.||-|-|
T Consensus 239 ~~~~~~l~~~l~~~g-V~v~~~~~v~~i~~--------------------~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 239 GEVAKQLQRMLTKQG-IDFKLGAKVTGAVK--------------------SGDGAKVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSEEEEEEEE--------------------ETTEEEEEEEETTSCCCEEEEESEEEECCC
T ss_pred HHHHHHHHHHHHhCC-CEEEECCeEEEEEE--------------------eCCEEEEEEEecCCCceEEEEcCEEEEeeC
Confidence 456777778887776 99999999999986 44667777753 5 5899999999999
Q ss_pred CCchh
Q 013625 170 GKSRV 174 (439)
Q Consensus 170 ~~S~v 174 (439)
.....
T Consensus 298 ~~p~~ 302 (491)
T 3urh_A 298 RKPST 302 (491)
T ss_dssp CEECC
T ss_pred CccCC
Confidence 86544
No 142
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=87.56 E-value=0.64 Score=45.39 Aligned_cols=57 Identities=9% Similarity=-0.042 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCccccccc--Ccee-EEEeCCCcEEEecEEEEecCCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK--GHLA-KLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~v-~v~~~dg~~~~adlvVgADG~~ 171 (439)
..|-+.|.+.+.+.| ++|+++++|++|.. . ++.+ .|.. +|.++.||.||.|-|.+
T Consensus 242 ~~l~~al~~~~~~~G-~~i~~~~~V~~i~~--------------------~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 242 GELPQGFARLSAIYG-GTYMLDTPIDEVLY--------------------KKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp THHHHHHHHHHHHTT-CEEECSCCCCEEEE--------------------ETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred HHHHHHHHHHHHHcC-CEEECCCEEEEEEE--------------------ECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 467788888888887 89999999999987 2 3443 4555 58899999999999998
Q ss_pred ch
Q 013625 172 SR 173 (439)
Q Consensus 172 S~ 173 (439)
+.
T Consensus 300 ~~ 301 (453)
T 2bcg_G 300 PE 301 (453)
T ss_dssp GG
T ss_pred ch
Confidence 64
No 143
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=87.37 E-value=1 Score=44.77 Aligned_cols=47 Identities=13% Similarity=0.023 Sum_probs=37.9
Q ss_pred CCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 108 TEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 108 ~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
.+..+|+++++|++|.. .+++.+.|++.+|+++.||.||.|-+....
T Consensus 212 l~~~~i~~~~~V~~I~~-------------------~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 212 FPQNWLKLSCEVKSITR-------------------EPSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp SCGGGEETTCCEEEEEE-------------------CTTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred CCCCEEEECCEEEEEEE-------------------cCCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 33367999999999986 014679999999999999999999986543
No 144
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=87.31 E-value=0.94 Score=44.05 Aligned_cols=58 Identities=21% Similarity=0.168 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
..+.+.|.+.+++.| ++|+++++|++++. ++....+.+ +|.++.+|.||-|.|.+...
T Consensus 191 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 191 KEFTDVLTEEMEANN-ITIATGETVERYEG--------------------DGRVQKVVT-DKNAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp HHHHHHHHHHHHTTT-EEEEESCCEEEEEC--------------------SSBCCEEEE-SSCEEECSEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCC-CEEEcCCEEEEEEc--------------------cCcEEEEEE-CCCEEECCEEEECcCCCCCh
Confidence 456778888888887 99999999999975 222224555 56789999999999987653
No 145
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=87.09 E-value=1.2 Score=42.85 Aligned_cols=63 Identities=19% Similarity=0.156 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch-
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 173 (439)
..+.+.|.+.+++.| ++|+.+++|++++. + .|.++||+++.+|+||-|-|....
T Consensus 187 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~----------------------~--~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 187 ATLADFVARYHAAQG-VDLRFERSVTGSVD----------------------G--VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESCCEEEEET----------------------T--EEEETTSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHcC-cEEEeCCEEEEEEC----------------------C--EEEECCCCEEEcCEEEECcCCCccH
Confidence 456677888888887 99999999999852 3 677889999999999999997643
Q ss_pred -hhhhhCCCC
Q 013625 174 -VRELAGFKT 182 (439)
Q Consensus 174 -vR~~l~~~~ 182 (439)
+-+.+++..
T Consensus 242 ~l~~~~gl~~ 251 (408)
T 2gqw_A 242 ALARAAGLAC 251 (408)
T ss_dssp HHHHHHTCCB
T ss_pred HHHHhCCCCC
Confidence 445555543
No 146
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=86.84 E-value=0.98 Score=43.27 Aligned_cols=53 Identities=9% Similarity=0.036 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCc
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 172 (439)
..+...+.+.+++.+ |+++.+++|++++. +. |.++||+++.+|+||-|-|...
T Consensus 218 ~~~~~~~~~~l~~~g-V~~~~~~~v~~i~~----------------------~~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 218 PNSRKAVASIYNQLG-IKLVHNFKIKEIRE----------------------HE--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSCCEEEECS----------------------SE--EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHHHCC-CEEEcCCceEEECC----------------------Ce--EEECCCCEEeeeEEEECCCCCc
Confidence 467777888887776 99999999999964 33 7789999999999999988543
No 147
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=86.76 E-value=1.5 Score=40.03 Aligned_cols=58 Identities=19% Similarity=0.093 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce-eEEEeCC----C--cEEEecEEEEe
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSD----G--TSLYAKLVVGA 167 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~d----g--~~~~adlvVgA 167 (439)
..+.+.|.+.+.+.+ ++|+++++|+++.. +++. ..|.+++ | .++.+|.||-|
T Consensus 184 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a 242 (320)
T 1trb_A 184 KILIKRLMDKVENGN-IILHTNRTLEEVTG--------------------DQMGVTGVRLRDTQNSDNIESLDVAGLFVA 242 (320)
T ss_dssp HHHHHHHHHHHHTSS-EEEECSCEEEEEEE--------------------CSSSEEEEEEECCTTCCCCEEEECSEEEEC
T ss_pred HHHHHHHHHhcccCC-eEEEcCceeEEEEc--------------------CCCceEEEEEEeccCCCceEEEEcCEEEEE
Confidence 456677778887776 99999999999976 2222 2355543 4 58999999999
Q ss_pred cCCCch
Q 013625 168 DGGKSR 173 (439)
Q Consensus 168 DG~~S~ 173 (439)
-|....
T Consensus 243 ~G~~p~ 248 (320)
T 1trb_A 243 IGHSPN 248 (320)
T ss_dssp SCEEES
T ss_pred eCCCCC
Confidence 997543
No 148
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.75 E-value=0.68 Score=45.36 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=42.5
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC--cEEEecEEEEecCCCchh
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S~v 174 (439)
+...+.+.+.+.+ ++++.++.+. +. ...+.|.+.+| .++.+|.||.|+|.++.+
T Consensus 98 l~~~~~~~~~~~g-v~~~~g~~~~-~~----------------------~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 98 LTRGIEGLFKKNK-VTYVKGYGKF-VS----------------------PSEISVDTIEGENTVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp HHHHHHHHHHHHT-CEEEESCEEE-EE----------------------TTEEEECCSSSCCEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHhCC-CEEEEeEEEE-ec----------------------CCEEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 4444555565555 9999998664 43 25678887788 689999999999998766
Q ss_pred hhhhC
Q 013625 175 RELAG 179 (439)
Q Consensus 175 R~~l~ 179 (439)
-...+
T Consensus 154 p~~~g 158 (470)
T 1dxl_A 154 LPGVT 158 (470)
T ss_dssp BTTBC
T ss_pred CCCCC
Confidence 54433
No 149
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=84.97 E-value=1.9 Score=40.28 Aligned_cols=55 Identities=9% Similarity=0.066 Sum_probs=41.4
Q ss_pred HHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEE-ecEEEEecCCCch
Q 013625 99 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLY-AKLVVGADGGKSR 173 (439)
Q Consensus 99 ~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~-adlvVgADG~~S~ 173 (439)
+.|.+.+++.++++++.+++|.+++. .++.+.|.+.||+++. +|.||-|-|....
T Consensus 218 ~~l~~~l~~~g~v~~~~~~~v~~i~~--------------------~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 218 QRLGNVIKQGARIEMNVHYTVKDIDF--------------------NNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp HHHHHHHHTTCCEEEECSCCEEEEEE--------------------ETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred HHHHHHHhhCCcEEEecCcEEEEEEe--------------------cCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 55566666553499999999999965 3356788899998775 5999999997654
No 150
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=84.53 E-value=1.1 Score=44.08 Aligned_cols=62 Identities=8% Similarity=0.130 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC-----CCcEEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS-----DGTSLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-----dg~~~~adlvVgADG 169 (439)
..+.+.|.+.+++.| ++|+++++|+++.. .+ +++.+.+.++ +|+++.+|.||-|.|
T Consensus 224 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~---------~~---------~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 284 (478)
T 1v59_A 224 GEVAKATQKFLKKQG-LDFKLSTKVISAKR---------ND---------DKNVVEIVVEDTKTNKQENLEAEVLLVAVG 284 (478)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSEEEEEEEE---------ET---------TTTEEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE---------ec---------CCCeEEEEEEEcCCCCceEEECCEEEECCC
Confidence 356778888888887 99999999999964 00 1244666665 456899999999999
Q ss_pred CCchhh
Q 013625 170 GKSRVR 175 (439)
Q Consensus 170 ~~S~vR 175 (439)
......
T Consensus 285 ~~p~~~ 290 (478)
T 1v59_A 285 RRPYIA 290 (478)
T ss_dssp EEECCT
T ss_pred CCcCCC
Confidence 876653
No 151
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=84.50 E-value=1.2 Score=44.98 Aligned_cols=64 Identities=14% Similarity=0.277 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch-
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 173 (439)
..+.+.|.+.+++.| ++|+.+++|++++. ++. .|.+.+|+++.+|.||-|-|....
T Consensus 228 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~--~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 228 YEMAAYVHEHMKNHD-VELVFEDGVDALEE--------------------NGA--VVRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEG--------------------GGT--EEEETTSCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHcC-CEEEECCeEEEEec--------------------CCC--EEEECCCCEEEcCEEEEccCCCCCh
Confidence 466777888888887 99999999999975 223 477889999999999999998544
Q ss_pred -hhhhhCCC
Q 013625 174 -VRELAGFK 181 (439)
Q Consensus 174 -vR~~l~~~ 181 (439)
.-+.+|+.
T Consensus 285 ~~l~~~g~~ 293 (588)
T 3ics_A 285 SLAKGAGLA 293 (588)
T ss_dssp HHHHHTTCC
T ss_pred HHHHhcCce
Confidence 33444544
No 152
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=84.35 E-value=2.4 Score=41.26 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=35.9
Q ss_pred CCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC---CCc--EEEecEEEEecCCCc
Q 013625 109 EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DGT--SLYAKLVVGADGGKS 172 (439)
Q Consensus 109 ~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~--~~~adlvVgADG~~S 172 (439)
.+++|+.+++|++++. .++.+.|.++ +|+ ++.+|+||-|-|...
T Consensus 329 ~~v~i~~~~~v~~v~~--------------------~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 329 PRHAFRCMTTVERATA--------------------TAQGIELALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp CCSEEETTEEEEEEEE--------------------ETTEEEEEEEETTTCCEEEEEESEEEECCCEEC
T ss_pred CCeEEEeCCEEEEEEe--------------------cCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 3599999999999976 4466777776 676 599999999999753
No 153
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=83.98 E-value=2.2 Score=42.01 Aligned_cols=58 Identities=16% Similarity=0.188 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
.++.+.|.+.+++.| ++|+.+++|++++. ++....+.+ +|+++.+|.||-|-|.....
T Consensus 236 ~~~~~~l~~~l~~~G-V~i~~~~~v~~i~~--------------------~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHG-IQLAFGETVKEVAG--------------------NGKVEKIIT-DKNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp HHHHHHHHHHHHTTT-CEEEETCCEEEEEC--------------------SSSCCEEEE-SSCEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHhCC-eEEEeCCEEEEEEc--------------------CCcEEEEEE-CCcEEECCEEEECCCCCcCh
Confidence 356677788888887 99999999999964 122223444 78899999999999976543
No 154
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=83.98 E-value=1.7 Score=45.58 Aligned_cols=40 Identities=18% Similarity=0.142 Sum_probs=35.7
Q ss_pred cEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 111 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 111 v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
++|+++++|++|+. ++++++|++.+|+++.||.||.|-..
T Consensus 544 l~I~l~t~V~~I~~--------------------~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 544 LDIQLKSPVQCIDY--------------------SGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp SCEESSCCEEEEEC--------------------SSSSEEEEETTCCEEEESEEEECCCH
T ss_pred CcEEcCCeeEEEEE--------------------cCCEEEEEECCCcEEEcCEEEECCCH
Confidence 79999999999987 45679999999999999999999864
No 155
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=83.85 E-value=1.7 Score=42.72 Aligned_cols=59 Identities=10% Similarity=-0.026 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc-----EEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-----SLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~-----~~~adlvVgADG 169 (439)
.++.+.|.+.+++.| ++|+.+++|.+++. +.++.+.|.+.++. ++.+|.||-|-|
T Consensus 227 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~-------------------~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 227 QQMAELVAASMEERG-IPFLRKTVPLSVEK-------------------QDDGKLLVKYKNVETGEESEDVYDTVLWAIG 286 (483)
T ss_dssp HHHHHHHHHHHHHTT-CCEEETEEEEEEEE-------------------CTTSCEEEEEEETTTCCEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHhCC-CEEEeCCEEEEEEE-------------------cCCCcEEEEEecCCCCceeEEEcCEEEECcc
Confidence 456677888888887 99999999999976 02244777776654 799999999999
Q ss_pred CCch
Q 013625 170 GKSR 173 (439)
Q Consensus 170 ~~S~ 173 (439)
....
T Consensus 287 ~~p~ 290 (483)
T 3dgh_A 287 RKGL 290 (483)
T ss_dssp EEEC
T ss_pred cccC
Confidence 7543
No 156
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=83.84 E-value=2 Score=42.94 Aligned_cols=59 Identities=15% Similarity=0.014 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
.++...|.+.+++.+ ++++.+..+.+++. .++.+.|.+.++.++.+|.|+-|-|++-.+
T Consensus 263 ~ei~~~l~~~l~~~g-i~~~~~~~v~~~~~--------------------~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQG-VMFKNGILPKKLTK--------------------MDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETCCEEEEEE--------------------ETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred hhHHHHHHHHHHhhc-ceeecceEEEEEEe--------------------cCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 456677888888887 99999999999987 668899999999999999999999975544
No 157
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=83.82 E-value=0.69 Score=44.86 Aligned_cols=47 Identities=23% Similarity=0.278 Sum_probs=37.3
Q ss_pred hcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchhh
Q 013625 106 QNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRVR 175 (439)
Q Consensus 106 ~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~vR 175 (439)
.+.+ ++++.+++|+.+.. .+ -.|.+++|+++.+|.||.|+|.++.+.
T Consensus 71 ~~~g-v~~~~~~~v~~i~~--------------------~~--~~v~~~~g~~~~~d~lviAtG~~p~~~ 117 (431)
T 1q1r_A 71 AAQN-IQLLGGTQVTAINR--------------------DR--QQVILSDGRALDYDRLVLATGGRPRPL 117 (431)
T ss_dssp HHTT-EEEECSCCEEEEET--------------------TT--TEEEETTSCEEECSEEEECCCEEECCC
T ss_pred HhCC-CEEEeCCEEEEEEC--------------------CC--CEEEECCCCEEECCEEEEcCCCCccCC
Confidence 3445 99999999999975 22 357778899999999999999876543
No 158
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=82.69 E-value=2.4 Score=43.48 Aligned_cols=60 Identities=17% Similarity=0.125 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc--eeEEE-eCCCc--EEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH--LAKLD-LSDGT--SLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~v~v~-~~dg~--~~~adlvVgADG 169 (439)
..+...|.+.+.+.+ ++|+.++.|+++.. +++. ++.+. ..+|+ .+.|+.||-|.|
T Consensus 158 ~~l~~~L~~~a~~~g-v~i~~~~~v~~L~~-------------------~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATG 217 (660)
T 2bs2_A 158 HTMLFAVANECLKLG-VSIQDRKEAIALIH-------------------QDGKCYGAVVRDLVTGDIIAYVAKGTLIATG 217 (660)
T ss_dssp HHHHHHHHHHHHHHT-CEEECSEEEEEEEE-------------------ETTEEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhCC-CEEEECcEEEEEEe-------------------cCCEEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 368888999888776 99999999999976 0122 23333 25676 599999999999
Q ss_pred CCchh
Q 013625 170 GKSRV 174 (439)
Q Consensus 170 ~~S~v 174 (439)
..|.+
T Consensus 218 G~~~~ 222 (660)
T 2bs2_A 218 GYGRI 222 (660)
T ss_dssp CCGGG
T ss_pred cchhh
Confidence 99875
No 159
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=82.59 E-value=2.6 Score=41.45 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC--CC--cEEEecEEEEecCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS--DG--TSLYAKLVVGADGG 170 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg--~~~~adlvVgADG~ 170 (439)
.++.+.|.+.+++. ++|+++++|++++. +++.+.+.+. +| .++.+|.||-|-|.
T Consensus 215 ~~~~~~l~~~l~~~--V~i~~~~~v~~i~~--------------------~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE--FYFDAKARVISTIE--------------------KEDAVEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHHHHHHHHTT--SEEETTCEEEEEEE--------------------CSSSEEEEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHHHHHHHHhhC--cEEEECCEEEEEEE--------------------cCCEEEEEEEeCCCceEEEECCEEEEeeCC
Confidence 45666777777654 99999999999976 3456778775 77 68999999999998
Q ss_pred Cch
Q 013625 171 KSR 173 (439)
Q Consensus 171 ~S~ 173 (439)
...
T Consensus 273 ~p~ 275 (492)
T 3ic9_A 273 KAN 275 (492)
T ss_dssp EES
T ss_pred ccC
Confidence 654
No 160
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=82.47 E-value=2.2 Score=39.21 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC---CC--cEEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS---DG--TSLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg--~~~~adlvVgADG 169 (439)
..+.+.|.+.+.+.+ ++++++++|.+++. ++....|.++ +| .++.+|+||-|-|
T Consensus 191 ~~~~~~l~~~l~~~g-v~v~~~~~v~~i~~--------------------~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2zbw_A 191 EASVKELMKAHEEGR-LEVLTPYELRRVEG--------------------DERVRWAVVFHNQTQEELALEVDAVLILAG 249 (335)
T ss_dssp HHHHHHHHHHHHTTS-SEEETTEEEEEEEE--------------------SSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHHHHHHHhccccCC-eEEecCCcceeEcc--------------------CCCeeEEEEEECCCCceEEEecCEEEEeec
Confidence 456667777777776 99999999999975 2232345554 77 5899999999999
Q ss_pred CCch
Q 013625 170 GKSR 173 (439)
Q Consensus 170 ~~S~ 173 (439)
....
T Consensus 250 ~~p~ 253 (335)
T 2zbw_A 250 YITK 253 (335)
T ss_dssp EEEE
T ss_pred CCCC
Confidence 7653
No 161
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=82.05 E-value=1.2 Score=44.00 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
..|-+.|.+.+.+.+ ++|+.+++|++|.. ++ ..+++.||+++.||.||-+--.
T Consensus 222 ~~l~~~l~~~l~~~g-~~i~~~~~V~~I~~--------------------~~--~~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTLPKEK-TRFGEKGKVTKVNA--------------------NN--KTVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTSCGGG-EEESGGGCEEEEET--------------------TT--TEEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHhcC-eeeecceEEEEEEc--------------------cC--CEEEEcCCCEEECCEEEECCCH
Confidence 456777777777776 89999999999976 22 3467899999999999977543
No 162
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=81.76 E-value=1.7 Score=42.58 Aligned_cols=54 Identities=11% Similarity=0.135 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC---cEEEecEEEEecCCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG---TSLYAKLVVGADGGK 171 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg---~~~~adlvVgADG~~ 171 (439)
..|-+.|.+.+. .++|+++++|++|+. .+++++|++.+| +++.||.||-|-+.+
T Consensus 239 ~~l~~~l~~~l~---~~~i~~~~~V~~i~~--------------------~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIG---TDNIVFGAEVTSMKN--------------------VSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHC---GGGEETTCEEEEEEE--------------------ETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcC---CCeEEECCEEEEEEE--------------------cCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 345566666653 268999999999987 457788998887 689999999998764
No 163
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.63 E-value=1.4 Score=41.63 Aligned_cols=61 Identities=16% Similarity=0.146 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch-
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR- 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~- 173 (439)
.++.+.|.+.+++.| ++++.+++|++++. . .|.++||+ +.+|+||-|-|....
T Consensus 183 ~~~~~~l~~~l~~~g-V~i~~~~~v~~i~~----------------------~--~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 183 EELSNMIKDMLEETG-VKFFLNSELLEANE----------------------E--GVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp HHHHHHHHHHHHHTT-EEEECSCCEEEECS----------------------S--EEEETTEE-EECSCEEEECCEEECC
T ss_pred HHHHHHHHHHHHHCC-CEEEcCCEEEEEEe----------------------e--EEEECCCE-EEcCEEEECcCCCcCH
Confidence 356677888888887 99999999999953 3 36678888 999999999997654
Q ss_pred -hhhhhCCC
Q 013625 174 -VRELAGFK 181 (439)
Q Consensus 174 -vR~~l~~~ 181 (439)
+-+.+++.
T Consensus 237 ~ll~~~gl~ 245 (367)
T 1xhc_A 237 DLARRSGIH 245 (367)
T ss_dssp HHHHHTTCC
T ss_pred HHHHhCCCC
Confidence 33445544
No 164
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=81.35 E-value=3 Score=42.50 Aligned_cols=58 Identities=7% Similarity=-0.049 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecC
Q 013625 94 NKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 94 R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 169 (439)
-..|-+.|.+.+...| ++|++++.|..|..+ .+ .+....|...+|+++.||.||.+..
T Consensus 377 ~g~L~qaL~r~~~~~G-g~i~l~~~V~~I~~~---------~~--------~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFG-GIYCLRHSVQCLVVD---------KE--------SRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHHHTT-CEEESSCCEEEEEEE---------TT--------TCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHHHcC-CEEEeCCEeeEEEEe---------CC--------CCeEEEEEeCCCCEEEcCEEEEChh
Confidence 4788899999999988 899999999999761 00 0233445567899999999998443
No 165
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.07 E-value=1.5 Score=42.88 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC--cEEEecEEEEecCCCc
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKS 172 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S 172 (439)
..+.+.|.+.+.+.+ ++++++++|++++. +.+.+...+| +++.+|.||-|.|.+.
T Consensus 212 ~~~~~~l~~~l~~~g-v~i~~~~~v~~i~~----------------------~~v~v~~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 212 SELTAPVAESLKKLG-IALHLGHSVEGYEN----------------------GCLLANDGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp HHHHHHHHHHHHHHT-CEEETTCEEEEEET----------------------TEEEEECSSSCCCEECCSCEEECCCEEE
T ss_pred HHHHHHHHHHHHHCC-CEEEECCEEEEEEe----------------------CCEEEEECCCceEEEECCEEEECcCCCc
Confidence 456677778787776 99999999999953 2366665567 6899999999999876
Q ss_pred hh
Q 013625 173 RV 174 (439)
Q Consensus 173 ~v 174 (439)
..
T Consensus 269 ~~ 270 (458)
T 1lvl_A 269 RT 270 (458)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 166
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=81.06 E-value=2.5 Score=41.50 Aligned_cols=57 Identities=9% Similarity=0.081 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
..+.+.|.+.+++.| ++|+++++|++++. ++....+.++ +.++.+|.||-|-|....
T Consensus 227 ~~~~~~l~~~l~~~G-v~i~~~~~v~~i~~--------------------~~~v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 227 GDMAEYIYKEADKHH-IEILTNENVKAFKG--------------------NERVEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHHHHHHHHHHHTT-CEEECSCCEEEEEE--------------------SSBEEEEEET-TEEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHHcC-cEEEcCCEEEEEEc--------------------CCcEEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 356677888888887 99999999999975 2222235554 558999999999998654
No 167
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=80.17 E-value=3.2 Score=40.62 Aligned_cols=58 Identities=7% Similarity=-0.059 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC-c-eeEEEeCC---C----cEEEecEEE
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG-H-LAKLDLSD---G----TSLYAKLVV 165 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~-~v~v~~~d---g----~~~~adlvV 165 (439)
..+.+.+.+.+.+.| ++|+.+++|++++. .+ + .+.+.+.+ | .++.+|.||
T Consensus 228 ~~~~~~~~~~l~~~g-v~i~~~~~v~~i~~--------------------~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi 286 (478)
T 3dk9_A 228 SMISTNCTEELENAG-VEVLKFSQVKEVKK--------------------TLSGLEVSMVTAVPGRLPVMTMIPDVDCLL 286 (478)
T ss_dssp HHHHHHHHHHHHHTT-CEEETTEEEEEEEE--------------------CSSSEEEEEEECCTTSCCEEEEEEEESEEE
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE--------------------cCCCcEEEEEEccCCCCcccceEEEcCEEE
Confidence 556777888888877 99999999999976 22 2 47787775 2 679999999
Q ss_pred EecCCCch
Q 013625 166 GADGGKSR 173 (439)
Q Consensus 166 gADG~~S~ 173 (439)
-|-|....
T Consensus 287 ~a~G~~p~ 294 (478)
T 3dk9_A 287 WAIGRVPN 294 (478)
T ss_dssp ECSCEEES
T ss_pred EeeccccC
Confidence 99997544
No 168
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=79.71 E-value=1.2 Score=42.55 Aligned_cols=56 Identities=7% Similarity=-0.050 Sum_probs=42.0
Q ss_pred HHHHHHHHHHh----hcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCC
Q 013625 95 KVLHSSLLSCM----QNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGG 170 (439)
Q Consensus 95 ~~l~~~L~~~~----~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~ 170 (439)
..++..+.+.+ ++.+ ++++.++++..++. ++....+.+++|+++.+|+||.|=|.
T Consensus 198 ~~~~~~~~~~~~~~l~~~g-i~v~~~~~v~~v~~--------------------~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 198 AQFTKGWERLYGFGTENAL-IEWHPGPDAAVVKT--------------------DTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp HHHHHHHHHHSCTTSTTCS-EEEECTTTTCEEEE--------------------ETTTTEEEETTSCEEECSEEEECCCE
T ss_pred ccccHHHHHHHHHHHHhcC-cEEEeCceEEEEEe--------------------cccceEEEcCCCcEEEeeEEEEecCc
Confidence 34444444443 3445 99999999999876 45667889999999999999998775
Q ss_pred C
Q 013625 171 K 171 (439)
Q Consensus 171 ~ 171 (439)
.
T Consensus 257 ~ 257 (401)
T 3vrd_B 257 R 257 (401)
T ss_dssp E
T ss_pred C
Confidence 3
No 169
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=79.38 E-value=1.3 Score=43.43 Aligned_cols=54 Identities=17% Similarity=0.170 Sum_probs=38.5
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC------------cEEEecEE
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG------------TSLYAKLV 164 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg------------~~~~adlv 164 (439)
+.+.+.+.+.+.+ ++++.++.+. +. +..+.|...+| .++.+|.|
T Consensus 97 l~~~~~~~~~~~g-v~~~~g~~~~-~~----------------------~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~l 152 (482)
T 1ojt_A 97 LTGGLAGMAKSRK-VDVIQGDGQF-LD----------------------PHHLEVSLTAGDAYEQAAPTGEKKIVAFKNC 152 (482)
T ss_dssp HHHHHHHHHHHTT-CEEEEEEEEE-EE----------------------TTEEEEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCC-cEEEeeEEEE-cc----------------------CCEEEEEecCCcccccccccCcceEEEcCEE
Confidence 3444555555555 9999998654 32 25677776666 68999999
Q ss_pred EEecCCCchh
Q 013625 165 VGADGGKSRV 174 (439)
Q Consensus 165 VgADG~~S~v 174 (439)
|.|+|.++.+
T Consensus 153 ViAtGs~p~~ 162 (482)
T 1ojt_A 153 IIAAGSRVTK 162 (482)
T ss_dssp EECCCEEECC
T ss_pred EECCCCCCCC
Confidence 9999998754
No 170
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=79.34 E-value=1.6 Score=43.06 Aligned_cols=58 Identities=10% Similarity=0.038 Sum_probs=43.0
Q ss_pred HHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch--hhhhhCC
Q 013625 103 SCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR--VRELAGF 180 (439)
Q Consensus 103 ~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~--vR~~l~~ 180 (439)
+.+++.| ++|+.+++|+++.. ++....+.+.+|+++.+|+||-|-|.++. +-+.+|.
T Consensus 265 ~~l~~~G-V~v~~~~~v~~i~~--------------------~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 265 QELERWG-IDYVHIPNVKRVEG--------------------NEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHHHHT-CEEEECSSEEEEEC--------------------SSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTC
T ss_pred HHHHhCC-cEEEeCCeeEEEec--------------------CCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCC
Confidence 4455556 99999999999975 22344567889999999999999998655 3445554
Q ss_pred C
Q 013625 181 K 181 (439)
Q Consensus 181 ~ 181 (439)
.
T Consensus 324 ~ 324 (493)
T 1y56_A 324 K 324 (493)
T ss_dssp C
T ss_pred C
Confidence 3
No 171
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=78.57 E-value=2.1 Score=41.96 Aligned_cols=53 Identities=13% Similarity=0.106 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC--cE------EEecEEEEe
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TS------LYAKLVVGA 167 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~------~~adlvVgA 167 (439)
.+...+.+.+.+.+ ++++.++.+.. +...++|...+| .+ +.+|.||.|
T Consensus 97 ~l~~~~~~~~~~~g-v~~~~g~~~~~-----------------------~~~~v~V~~~~G~~~~~~~~~~i~~d~lViA 152 (478)
T 1v59_A 97 QLTGGIELLFKKNK-VTYYKGNGSFE-----------------------DETKIRVTPVDGLEGTVKEDHILDVKNIIVA 152 (478)
T ss_dssp HHHHHHHHHHHHTT-CEEEESEEEES-----------------------SSSEEEEECCTTCTTCCSSCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCC-CEEEEEEEEEc-----------------------cCCeEEEEecCCCcccccccceEEeCEEEEC
Confidence 34445556666655 99999987642 235688888777 56 999999999
Q ss_pred cCCCc
Q 013625 168 DGGKS 172 (439)
Q Consensus 168 DG~~S 172 (439)
+|.++
T Consensus 153 tGs~p 157 (478)
T 1v59_A 153 TGSEV 157 (478)
T ss_dssp CCEEE
T ss_pred cCCCC
Confidence 99876
No 172
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=78.34 E-value=3.2 Score=41.07 Aligned_cols=56 Identities=29% Similarity=0.264 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc----EEEecEEEEecCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT----SLYAKLVVGADGG 170 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~----~~~adlvVgADG~ 170 (439)
..+.+.+.+.+++.| |+|+.+++|++++. +...+....+||+ ++.+|+||-|-|.
T Consensus 272 ~~~~~~~~~~L~~~G-V~v~~~~~v~~v~~--------------------~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 272 KKLSSYAQSHLENTS-IKVHLRTAVAKVEE--------------------KQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHHHTT-CEEETTEEEEEECS--------------------SEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhcc-eeeecCceEEEEeC--------------------CceEEEEEecCcccceeeeccCEEEEccCC
Confidence 567777888888887 99999999999965 2233344556774 6999999999996
Q ss_pred C
Q 013625 171 K 171 (439)
Q Consensus 171 ~ 171 (439)
.
T Consensus 331 ~ 331 (502)
T 4g6h_A 331 K 331 (502)
T ss_dssp E
T ss_pred c
Confidence 3
No 173
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=77.94 E-value=3.2 Score=40.08 Aligned_cols=50 Identities=8% Similarity=0.011 Sum_probs=38.5
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce-eEEEeCCCcEEEecEEEEecCCC
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL-AKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+-+.|.+.+ | ++|+++++|++|.. ++++ +.|++ +|.++.||.||-|-+..
T Consensus 217 l~~~l~~~l---g-~~i~~~~~V~~i~~--------------------~~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 217 VSIRMAEAL---G-DDVFLNAPVRTVKW--------------------NESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHH---G-GGEECSCCEEEEEE--------------------ETTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred HHHHHHHhc---C-CcEEcCCceEEEEE--------------------eCCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 334444443 5 79999999999987 4455 77776 77899999999999876
No 174
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=77.75 E-value=2.6 Score=39.27 Aligned_cols=57 Identities=18% Similarity=0.070 Sum_probs=41.1
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCc---eeEEEeCCC--cEEEecEEEEecCC
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGH---LAKLDLSDG--TSLYAKLVVGADGG 170 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~v~v~~~dg--~~~~adlvVgADG~ 170 (439)
.+.+.|.+...+.+ ++|+++++|+++.. +++ .+.+...+| .++.+|.||-|-|.
T Consensus 203 ~~~~~l~~~~~~~g-v~i~~~~~v~~i~~--------------------~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 203 KTAHEVERARANGT-IDVYLETEVASIEE--------------------SNGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp HHHHSSHHHHHHTS-EEEESSEEEEEEEE--------------------ETTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred HHHHHHHHHhhcCc-eEEEcCcCHHHhcc--------------------CCCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 35556666666665 99999999999976 223 344443477 58999999999996
Q ss_pred Cch
Q 013625 171 KSR 173 (439)
Q Consensus 171 ~S~ 173 (439)
...
T Consensus 262 ~p~ 264 (360)
T 3ab1_A 262 KSN 264 (360)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 175
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=77.62 E-value=2.7 Score=38.53 Aligned_cols=36 Identities=8% Similarity=0.014 Sum_probs=28.2
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhh
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 357 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 357 (439)
.+|+.+||++.... ..+..|+.+|..+|..+...++
T Consensus 300 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~ 335 (338)
T 3itj_A 300 PGFFAAGDVQDSKY----RQAITSAGSGCMAALDAEKYLT 335 (338)
T ss_dssp TTEEECGGGGCSSC----CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeeccCCCCc----cceeeehhhhHHHHHHHHHHHh
Confidence 57999999998321 2356789999999999888775
No 176
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=77.32 E-value=3.3 Score=42.31 Aligned_cols=62 Identities=11% Similarity=0.080 Sum_probs=45.2
Q ss_pred ehHHHHHHHHHHhhcC-CCc-EEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC---ceeEEE---eCCCc--EEEec
Q 013625 93 ENKVLHSSLLSCMQNT-EFQ-KTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG---HLAKLD---LSDGT--SLYAK 162 (439)
Q Consensus 93 ~R~~l~~~L~~~~~~~-~~v-~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~v~v~---~~dg~--~~~ad 162 (439)
.-..+.+.|.+.+.+. + + +|+.++.|+++..+ ++ ....|. ..+|+ ++.|+
T Consensus 149 ~g~~~~~~l~~~~~~~~g-v~~i~~~~~v~~L~~~-------------------~~~~g~v~Gv~~~~~~~g~~~~i~A~ 208 (643)
T 1jnr_A 149 HGESYKPIIAEAAKMAVG-EENIYERVFIFELLKD-------------------NNDPNAVAGAVGFSVREPKFYVFKAK 208 (643)
T ss_dssp EETTHHHHHHHHHHHHHC-GGGEECSEEEEEEEEC-------------------TTCTTBEEEEEEEESSSSCEEEEECS
T ss_pred CcHHHHHHHHHHHHhcCC-CcEEEecCEEEEEEEc-------------------CCccceeEEEEEEEecCCcEEEEEcC
Confidence 3445777888888776 5 9 99999999999861 11 222232 35665 68999
Q ss_pred EEEEecCCCchh
Q 013625 163 LVVGADGGKSRV 174 (439)
Q Consensus 163 lvVgADG~~S~v 174 (439)
.||.|+|..|.+
T Consensus 209 ~VVlAtGG~~~~ 220 (643)
T 1jnr_A 209 AVILATGGATLL 220 (643)
T ss_dssp EEEECCCCBCSS
T ss_pred EEEECCCccccc
Confidence 999999999863
No 177
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=76.34 E-value=2.8 Score=40.68 Aligned_cols=55 Identities=9% Similarity=0.080 Sum_probs=41.1
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC-cEEEecEEEEecCCCchhh
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG-TSLYAKLVVGADGGKSRVR 175 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg-~~~~adlvVgADG~~S~vR 175 (439)
+.+.+.+.+.+.+ ++++.++.+. +. ...+.|...+| .++.+|.||.|.|.++..-
T Consensus 93 l~~~~~~~~~~~g-v~~~~g~~~~-id----------------------~~~v~V~~~~G~~~i~~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 93 LTGGVEGLLKGNK-VEIVKGEAYF-VD----------------------ANTVRVVNGDSAQTYTFKNAIIATGSRPIEL 148 (455)
T ss_dssp HHHHHHHHHHTTT-CEEEESEEEE-EE----------------------TTEEEEEETTEEEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHhCC-CEEEEEEEEE-cc----------------------CCeEEEEeCCCcEEEEeCEEEEecCCCCCCC
Confidence 4555666666665 9999998654 42 26688888888 7899999999999866543
No 178
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=75.76 E-value=4.9 Score=36.40 Aligned_cols=53 Identities=9% Similarity=0.049 Sum_probs=38.2
Q ss_pred HHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC---Cc--EEEecEEEEecCCCch
Q 013625 101 LLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---GT--SLYAKLVVGADGGKSR 173 (439)
Q Consensus 101 L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~--~~~adlvVgADG~~S~ 173 (439)
+.+.+.+..+++++++++|+++.. ++....|.+.+ |+ ++.+|+||-|-|....
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~--------------------~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 252 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKG--------------------DKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPP 252 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEE--------------------SSSEEEEEEEETTTCCEEEEECSEEEECCCEECC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEec--------------------cCceeEEEEEECCCCceEEEEcCEEEEEECCCCC
Confidence 344455553499999999999976 33444566654 76 7999999999997543
No 179
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=74.58 E-value=5.2 Score=39.21 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC---Cc--EEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---GT--SLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~--~~~adlvVgADG 169 (439)
.++.+.|.+.+++.+ ++|+.++++.+++. .+++.+.+.+.+ |+ ++.+|.||-|-|
T Consensus 225 ~~~~~~l~~~l~~~g-v~~~~~~~v~~i~~-------------------~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 225 QQMSSLVTEHMESHG-TQFLKGCVPSHIKK-------------------LPTNQLQVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETEEEEEEEE-------------------CTTSCEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCEEEEEEE-------------------cCCCcEEEEEEeCCCCeeEEEECCEEEEccc
Confidence 456777888888887 99999999999975 022446666654 55 578999999999
Q ss_pred CCch
Q 013625 170 GKSR 173 (439)
Q Consensus 170 ~~S~ 173 (439)
....
T Consensus 285 ~~p~ 288 (488)
T 3dgz_A 285 RVPE 288 (488)
T ss_dssp EEES
T ss_pred CCcc
Confidence 7544
No 180
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=73.79 E-value=2.9 Score=40.43 Aligned_cols=53 Identities=8% Similarity=0.167 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCc
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 172 (439)
.++.+.+.+.+.+.+ ++++.+++|.+++. ..+.+++|+++.+|+||-|-|..-
T Consensus 188 ~~~~~~~~~~l~~~g-V~i~~~~~v~~~~~------------------------~~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 188 ADMNQPILDELDKRE-IPYRLNEEINAING------------------------NEITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGGGHHHHHHHHHTT-CCEEESCCEEEEET------------------------TEEEETTSCEEECSEEEECCCEEE
T ss_pred chhHHHHHHHhhccc-eEEEeccEEEEecC------------------------CeeeecCCeEEeeeeEEEEeceec
Confidence 345567777777777 99999999999854 247789999999999999999643
No 181
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=73.16 E-value=4.3 Score=38.50 Aligned_cols=43 Identities=19% Similarity=0.177 Sum_probs=35.4
Q ss_pred hcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 106 QNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 106 ~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
.+.+ ++++.+++|++++. ..-+|++++|+++.+|.||-|-|.+
T Consensus 73 ~~~~-i~~~~~~~V~~id~----------------------~~~~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 73 EKNN-IKVITSEFATSIDP----------------------NNKLVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHTT-CEEECSCCEEEEET----------------------TTTEEEETTSCEEECSEEEECCCEE
T ss_pred HHCC-CEEEeCCEEEEEEC----------------------CCCEEEECCCCEEECCEEEEecCCC
Confidence 3444 99999999999976 2236788999999999999999963
No 182
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=72.90 E-value=7.5 Score=35.43 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=28.1
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhc
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 358 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 358 (439)
.+|..+||++.... .-+..|+.+|..+|..+...+..
T Consensus 277 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 277 PMLFAAGDVSDYIY----RQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp TTEEECSTTTCSSC----CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCccH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56999999987531 23667888888888888887664
No 183
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=72.67 E-value=6 Score=38.75 Aligned_cols=52 Identities=12% Similarity=0.170 Sum_probs=39.2
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc----EEEecEEEEecCCC
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT----SLYAKLVVGADGGK 171 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~----~~~adlvVgADG~~ 171 (439)
.|-+.|.+.+. .+|+++++|++|+. +++++.|++.+|+ +++||.||-|=+..
T Consensus 242 ~l~~~l~~~l~----~~i~~~~~V~~I~~--------------------~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQ----DKVHFNAQVIKIQQ--------------------NDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTG----GGEESSCEEEEEEE--------------------CSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhcc----cccccCCEEEEEEE--------------------CCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 44455555543 28999999999987 4466888887775 58999999998864
No 184
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=72.55 E-value=5.2 Score=39.42 Aligned_cols=67 Identities=16% Similarity=0.120 Sum_probs=49.2
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC-----cEEEecEEE
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG-----TSLYAKLVV 165 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg-----~~~~adlvV 165 (439)
...|.++.+.|...+.+.+ ..|++|++|++++....... . ...+.++|+..|+ .++.|+.||
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~-~~vrf~~~V~~v~~~~~~~~-------~-----~~~~~~~V~~~~~~~g~~~~~~ar~vV 207 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFS-DVVAYGEEVVEVIPGKSDPS-------S-----SVVDFFTVRSRNVETGEISARRTRKVV 207 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTG-GGEEESEEEEEEEEECSSTT-------S-----SCBCEEEEEEEETTTCCEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcC-CceEcceEEEeecccccccc-------c-----cccceEEEEEecCCCceEEEEEeCEEE
Confidence 4779999999999999886 78999999999986211000 0 0124577777654 278999999
Q ss_pred EecCC
Q 013625 166 GADGG 170 (439)
Q Consensus 166 gADG~ 170 (439)
-|-|.
T Consensus 208 latG~ 212 (501)
T 4b63_A 208 IAIGG 212 (501)
T ss_dssp ECCCC
T ss_pred ECcCC
Confidence 99994
No 185
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=72.55 E-value=2.6 Score=40.35 Aligned_cols=47 Identities=23% Similarity=0.220 Sum_probs=36.8
Q ss_pred hhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 105 MQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 105 ~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
+.+.+ ++++.+++|+++.. ...+|.+++|+++.+|.||.|.|.+...
T Consensus 69 ~~~~~-v~~~~~~~v~~i~~----------------------~~~~v~~~~g~~~~~d~lviAtG~~~~~ 115 (408)
T 2gqw_A 69 KRAPE-VEWLLGVTAQSFDP----------------------QAHTVALSDGRTLPYGTLVLATGAAPRA 115 (408)
T ss_dssp TTSCS-CEEEETCCEEEEET----------------------TTTEEEETTSCEEECSEEEECCCEEECC
T ss_pred HHHCC-CEEEcCCEEEEEEC----------------------CCCEEEECCCCEEECCEEEECCCCCCCC
Confidence 33444 99999999999975 2345777889999999999999985543
No 186
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=72.14 E-value=4.2 Score=36.37 Aligned_cols=50 Identities=14% Similarity=0.119 Sum_probs=39.7
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+...+.+.+.+.+ ++++. ++|+++.. .. .|.++||+++.+|+||-|-|..
T Consensus 176 ~~~~~~~~l~~~g-v~i~~-~~v~~i~~----------------------~~-~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 176 PDADQHALLAARG-VRVET-TRIREIAG----------------------HA-DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp CCHHHHHHHHHTT-CEEEC-SCEEEEET----------------------TE-EEEETTSCEEEESEEEECCEEE
T ss_pred CCHHHHHHHHHCC-cEEEc-ceeeeeec----------------------CC-eEEeCCCCEEEEEEEEEccCcc
Confidence 5566677777776 99985 89999865 22 7888999999999999999864
No 187
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=71.79 E-value=6.7 Score=37.72 Aligned_cols=53 Identities=8% Similarity=-0.032 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC--cEEEecEEEEecCCC
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGK 171 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~ 171 (439)
...+.|.+.+++.| |+++.+++|++++. +.+.+...+| +++.+|+||-|=|..
T Consensus 201 ~~~~~l~~~l~~~G-V~~~~~~~v~~v~~----------------------~~~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 201 ASKRLVEDLFAERN-IDWIANVAVKAIEP----------------------DKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp THHHHHHHHHHHTT-CEEECSCEEEEECS----------------------SEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHhCC-eEEEeCceEEEEeC----------------------CceEEEeeCCCceEeecceEEEeccCC
Confidence 34556667777777 99999999999954 6677776665 489999999998854
No 188
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=71.40 E-value=8.3 Score=37.51 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=29.4
Q ss_pred cCCEEEEcccccccCCcccc-----cchhcHHHHHHHHHHHHH
Q 013625 317 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 354 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 354 (439)
..+|..+||++...++..|. =...|...|..+|..|..
T Consensus 286 ~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 286 DPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp STTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred CCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 46899999999877776664 246788888888888754
No 189
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=70.76 E-value=5.4 Score=38.06 Aligned_cols=41 Identities=7% Similarity=-0.035 Sum_probs=34.1
Q ss_pred cEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCc
Q 013625 111 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 111 v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 172 (439)
.+|+.+++|++|+. ++++++|++.+|+ +.||.||-|=+..-
T Consensus 218 ~~v~~~~~V~~i~~--------------------~~~~v~v~~~~g~-~~ad~Vv~a~~~~~ 258 (424)
T 2b9w_A 218 HPAERNVDITRITR--------------------EDGKVHIHTTDWD-RESDVLVLTVPLEK 258 (424)
T ss_dssp SCCBCSCCEEEEEC--------------------CTTCEEEEESSCE-EEESEEEECSCHHH
T ss_pred ceEEcCCEEEEEEE--------------------ECCEEEEEECCCe-EEcCEEEECCCHHH
Confidence 57899999999987 4456888888886 89999999988753
No 190
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=70.42 E-value=3.9 Score=42.01 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=28.7
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhh
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 357 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 357 (439)
||+.+.|++.+...+ .-+.=|+++|...|..|...+.
T Consensus 623 grl~FAGe~ts~~~~---g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCCCC---cCHHHHHHHHHHHHHHHHHHcc
Confidence 899999999886544 3466688888888888877654
No 191
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=69.95 E-value=8.9 Score=34.58 Aligned_cols=53 Identities=11% Similarity=0.007 Sum_probs=36.8
Q ss_pred HHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCcee-EEEeC---CCc--EEEecEEEEecCCCc
Q 013625 100 SLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDLS---DGT--SLYAKLVVGADGGKS 172 (439)
Q Consensus 100 ~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~---dg~--~~~adlvVgADG~~S 172 (439)
.+.+.+.+..+++|+++++++++.. +++.+ .|.++ +|+ ++.+|.||-|-|...
T Consensus 183 ~~~~~l~~~~gv~v~~~~~v~~i~~--------------------~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 183 ITLEHAKNNDKIEFLTPYVVEEIKG--------------------DASGVSSLSIKNTATNEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp HHHHHHHTCTTEEEETTEEEEEEEE--------------------ETTEEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred HHHHHHhhCCCeEEEeCCEEEEEEC--------------------CCCcEeEEEEEecCCCceEEEecCEEEEEecCcc
Confidence 3555565433499999999999976 22222 45554 675 789999999998643
No 192
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=69.57 E-value=6.5 Score=37.75 Aligned_cols=52 Identities=6% Similarity=-0.082 Sum_probs=39.4
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeC--CCcEEEecEEEEecCCC
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLS--DGTSLYAKLVVGADGGK 171 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg~~~~adlvVgADG~~ 171 (439)
+...|.+.+++.+ |+++++++|++++. +.+++... +|+++.+|+||-|-|..
T Consensus 202 ~~~~l~~~l~~~G-V~i~~~~~v~~v~~----------------------~~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 202 SKRLVEDLFAERN-IDWIANVAVKAIEP----------------------DKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHHTT-CEEECSCEEEEECS----------------------SEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHCC-CEEEeCCEEEEEeC----------------------CeEEEEecCCCceEEeeeEEEECCCCc
Confidence 5667777788777 99999999999964 44444432 26789999999998854
No 193
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=69.01 E-value=7.6 Score=37.73 Aligned_cols=55 Identities=24% Similarity=0.301 Sum_probs=41.6
Q ss_pred HHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC-ceeEEEeC--CCc--EEEecEEEEecCC
Q 013625 96 VLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG-HLAKLDLS--DGT--SLYAKLVVGADGG 170 (439)
Q Consensus 96 ~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~--dg~--~~~adlvVgADG~ 170 (439)
++.+.|.+.+. ++|+.+++|++++. .+ +.+.|.++ +|+ ++.+|.||-|-|.
T Consensus 215 ~~~~~l~~~l~----v~i~~~~~v~~i~~--------------------~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 215 DIVNTLLSILK----LNIKFNSPVTEVKK--------------------IKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp HHHHHHHHHHC----CCEECSCCEEEEEE--------------------EETTEEEEEECCTTSCCEEEEESCEEECCCE
T ss_pred HHHHHHHhcCE----EEEEECCEEEEEEE--------------------cCCCcEEEEEEecCCceEEEEcCEEEECcCC
Confidence 44444444442 89999999999976 33 56788887 676 8999999999998
Q ss_pred Cchh
Q 013625 171 KSRV 174 (439)
Q Consensus 171 ~S~v 174 (439)
....
T Consensus 271 ~p~~ 274 (466)
T 3l8k_A 271 RPVI 274 (466)
T ss_dssp EECC
T ss_pred Cccc
Confidence 6554
No 194
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=68.13 E-value=8.3 Score=34.71 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=27.2
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhh
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 357 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 357 (439)
.+|+.+||+++.. -..+..|+.+|..+|..+.+.++
T Consensus 277 ~~v~a~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 277 AGLFAAGDLRKDA----PKQVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp TTEEECGGGBTTC----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCc----hhhhhhHHhhHHHHHHHHHHHHH
Confidence 6799999998632 23456788888888888887765
No 195
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=68.00 E-value=7.3 Score=35.40 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=28.0
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhh
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 357 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 357 (439)
.+|..+||+++.-. ..+..|+.+|..+|..+...+.
T Consensus 281 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 281 PGVYAAGDVTSGNF----AQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp TTEEECSTTBTTCC----CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeecccCcch----hhHHHHHHHHHHHHHHHHHHhh
Confidence 56999999997521 2466789999999998888765
No 196
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=67.78 E-value=9.1 Score=34.47 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=27.3
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhc
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 358 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 358 (439)
.+|..+||++.... .-+..|+.++..+|..+...+..
T Consensus 270 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~ 306 (310)
T 1fl2_A 270 KGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDYLIR 306 (310)
T ss_dssp TTEEECSTTBSCSS----CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCcc----hhhhhhHhhHHHHHHHHHHHHHH
Confidence 56999999987542 23456788888888888877653
No 197
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=67.71 E-value=5.5 Score=36.26 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=28.4
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhc
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 358 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 358 (439)
.+|..+||++... ..-.-+..|+.+|..+|..+...+..
T Consensus 278 ~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 278 EGFFAAGDICTYE--GKVNLIASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp TTEEECGGGEECT--TCCCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCEEEccceecCC--CCcceEeeehhhHHHHHHHHHHhhCh
Confidence 5699999998642 12334567888888888888887754
No 198
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=67.62 E-value=17 Score=32.70 Aligned_cols=61 Identities=13% Similarity=0.053 Sum_probs=43.5
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+.-.+|.....+.+.+.+.+.+. ...++.+.. ...+..++...+|+++.+|.||-|-|.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------------~~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 57 IKPEEFKEIGLNEVMKYPSVHYY-EKTVVMITK-------------------QSTGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp BCHHHHHHHHHHHHTTSTTEEEE-ECCEEEEEE-------------------CTTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHhcCCEEEE-eeEEEEeee-------------------cCCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 44567777777777777645554 445555544 1335678899999999999999999974
Q ss_pred c
Q 013625 172 S 172 (439)
Q Consensus 172 S 172 (439)
.
T Consensus 117 p 117 (304)
T 4fk1_A 117 E 117 (304)
T ss_dssp E
T ss_pred c
Confidence 3
No 199
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=67.19 E-value=6 Score=38.71 Aligned_cols=44 Identities=7% Similarity=-0.021 Sum_probs=35.1
Q ss_pred CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe-CCCc--EEEecEEEEecCCCch
Q 013625 110 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL-SDGT--SLYAKLVVGADGGKSR 173 (439)
Q Consensus 110 ~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~dg~--~~~adlvVgADG~~S~ 173 (439)
+++++.+++|+.+.. ....+.+.. .+|+ ++.+|.||.|.|.+..
T Consensus 107 gv~~~~~~~v~~i~~--------------------~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDT--------------------EKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp CCEEESSEEEEEEET--------------------TTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEEC--------------------CCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 499999999999976 345677765 5676 7999999999997543
No 200
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=66.93 E-value=7 Score=38.07 Aligned_cols=56 Identities=11% Similarity=0.071 Sum_probs=38.8
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC-C-cEEEecEEEEecCCCchh
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD-G-TSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-g-~~~~adlvVgADG~~S~v 174 (439)
+...+.+.+.+.+ ++++.++.+ .+. ...+.|...+ | .++.+|.||.|+|.++.+
T Consensus 99 l~~~~~~~~~~~g-v~~~~g~~~-~~~----------------------~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 99 LTGGIAHLFKQNK-VVHVNGYGK-ITG----------------------KNQVTATKADGGTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp HHHHHHHHHHHTT-CEEEESEEE-EEE----------------------TTEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHhCC-CEEEEEEEE-Eec----------------------CCEEEEEecCCCcEEEEeCEEEECCCCCCCC
Confidence 3334455555555 999998643 342 2668888877 5 589999999999987654
Q ss_pred hh
Q 013625 175 RE 176 (439)
Q Consensus 175 R~ 176 (439)
-.
T Consensus 155 p~ 156 (474)
T 1zmd_A 155 FP 156 (474)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 201
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=66.11 E-value=8.2 Score=39.74 Aligned_cols=53 Identities=8% Similarity=-0.064 Sum_probs=40.6
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe---CCCcEEEecEEEEecCCCc
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL---SDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~~~~adlvVgADG~~S 172 (439)
+...|.+.+++.| |+|+.+++|++++. +.+.+.. .+++++.+|.||-|-|...
T Consensus 569 ~~~~l~~~l~~~G-V~i~~~~~V~~i~~----------------------~~~~v~~~~~~~~~~i~aD~VV~A~G~~p 624 (690)
T 3k30_A 569 EVNRIQRRLIENG-VARVTDHAVVAVGA----------------------GGVTVRDTYASIERELECDAVVMVTARLP 624 (690)
T ss_dssp CHHHHHHHHHHTT-CEEEESEEEEEEET----------------------TEEEEEETTTCCEEEEECSEEEEESCEEE
T ss_pred hHHHHHHHHHHCC-CEEEcCcEEEEEEC----------------------CeEEEEEccCCeEEEEECCEEEECCCCCC
Confidence 3566777777776 99999999999965 4455553 2456899999999999643
No 202
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=65.76 E-value=5.7 Score=38.26 Aligned_cols=58 Identities=12% Similarity=0.147 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
.++...|.+.+.+.+ ++++. .+|++++. ..-.|.+++|.++.+|.||-|.|.++..
T Consensus 59 ~~~~~~l~~~~~~~g-v~~~~-~~v~~id~----------------------~~~~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 59 DDIAFPIRHYVERKG-IHFIA-QSAEQIDA----------------------EAQNITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp HHHEEECHHHHHTTT-CEEEC-SCEEEEET----------------------TTTEEEETTSCEEECSEEEECCCCEECG
T ss_pred HHHHHHHHHHHHHCC-CEEEE-eEEEEEEc----------------------CCCEEEECCCCEEECCEEEECCCCCcCc
Confidence 344444555565565 89875 59999965 2226788899999999999999987654
Q ss_pred hh
Q 013625 175 RE 176 (439)
Q Consensus 175 R~ 176 (439)
-.
T Consensus 115 ~~ 116 (437)
T 3sx6_A 115 EN 116 (437)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 203
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=65.04 E-value=9.5 Score=36.81 Aligned_cols=65 Identities=15% Similarity=0.110 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCc--
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS-- 172 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S-- 172 (439)
..+.+.|.+.+.+. ++++.+++|.+++. .+ .+...+.+|.++.+|.||-|-|...
T Consensus 190 ~~~~~~l~~~l~~~--v~i~~~~~v~~i~~--------------------~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 190 KEVTDILEEKLKKH--VNLRLQEITMKIEG--------------------EE-RVEKVVTDAGEYKAELVILATGIKPNI 246 (449)
T ss_dssp HHHHHHHHHHHTTT--SEEEESCCEEEEEC--------------------SS-SCCEEEETTEEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhC--cEEEeCCeEEEEec--------------------cC-cEEEEEeCCCEEECCEEEEeeCCccCH
Confidence 34556666666654 99999999999975 22 3444456788999999999999853
Q ss_pred hhhhhhCCCC
Q 013625 173 RVRELAGFKT 182 (439)
Q Consensus 173 ~vR~~l~~~~ 182 (439)
..-+.+|+..
T Consensus 247 ~l~~~~gl~~ 256 (449)
T 3kd9_A 247 ELAKQLGVRI 256 (449)
T ss_dssp HHHHHTTCCB
T ss_pred HHHHhCCccC
Confidence 3444555543
No 204
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=64.72 E-value=5.3 Score=42.25 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=28.7
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhc
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 358 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 358 (439)
+|+.+.|++.+...+ .-+.=|++++...|..|...+..
T Consensus 794 grL~FAGE~Ts~~~~---gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 794 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEehhHhCCCC---cCHHHHHHHHHHHHHHHHHHhhC
Confidence 899999999886544 24666788888888888776653
No 205
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=64.27 E-value=19 Score=32.19 Aligned_cols=57 Identities=16% Similarity=0.117 Sum_probs=44.4
Q ss_pred eeehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC--ceeEEEe-CCCcEEEecEEEEe
Q 013625 91 VVENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG--HLAKLDL-SDGTSLYAKLVVGA 167 (439)
Q Consensus 91 ~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~~-~dg~~~~adlvVgA 167 (439)
.+.+..+...|.+.+.+.+ ++++++ +|+++ . ++ ..+.++. .++ ++.+|.||-|
T Consensus 58 ~~~~~~~~~~~~~~~~~~~-v~~~~~-~v~~i-~--------------------~~~~~~~~v~~~~~~-~~~~d~lvlA 113 (315)
T 3r9u_A 58 VMDGISFMAPWSEQCMRFG-LKHEMV-GVEQI-L--------------------KNSDGSFTIKLEGGK-TELAKAVIVC 113 (315)
T ss_dssp CBCHHHHHHHHHHHHTTTC-CEEECC-CEEEE-E--------------------ECTTSCEEEEETTSC-EEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHcC-cEEEEE-EEEEE-e--------------------cCCCCcEEEEEecCC-EEEeCEEEEe
Confidence 3677889999999998887 999998 99998 6 22 4566433 334 9999999999
Q ss_pred cCCC
Q 013625 168 DGGK 171 (439)
Q Consensus 168 DG~~ 171 (439)
.|..
T Consensus 114 tG~~ 117 (315)
T 3r9u_A 114 TGSA 117 (315)
T ss_dssp CCEE
T ss_pred eCCC
Confidence 9973
No 206
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=61.01 E-value=5 Score=38.61 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=32.8
Q ss_pred CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCc
Q 013625 110 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 110 ~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 172 (439)
+++++.+ +|++|+. +.-+|++++|+++.+|+||-|-|.+.
T Consensus 70 gv~~i~~-~v~~Id~----------------------~~~~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 70 NIEFINE-KAESIDP----------------------DANTVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp TEEEECS-CEEEEET----------------------TTTEEEETTCCEEECSEEEECCCCEE
T ss_pred CcEEEEe-EEEEEEC----------------------CCCEEEECCCCEEECCEEEEeCCCCc
Confidence 3898877 7999965 33467889999999999999999753
No 207
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=60.88 E-value=12 Score=35.84 Aligned_cols=57 Identities=9% Similarity=-0.038 Sum_probs=40.8
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe--CC-----CcEEEecEEEEecC
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL--SD-----GTSLYAKLVVGADG 169 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~d-----g~~~~adlvVgADG 169 (439)
....+.+.+.+.+ |+++++++|++++. +.+.+.. .+ ++++.+|+||-|-|
T Consensus 210 ~~~~~~~~l~~~g-I~~~~~~~v~~v~~----------------------~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEG-IEAYTNCKVTKVED----------------------NKMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTT-CEEECSEEEEEEET----------------------TEEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCC-CEEEcCCEEEEEEC----------------------CeEEEEecccCCccccceEEEEeEEEEcCC
Confidence 5566777777776 99999999999965 4454443 34 45789999999987
Q ss_pred C--Cchhhh
Q 013625 170 G--KSRVRE 176 (439)
Q Consensus 170 ~--~S~vR~ 176 (439)
. +..+.+
T Consensus 267 ~~~~~~~~~ 275 (437)
T 3sx6_A 267 FKGVPAVAG 275 (437)
T ss_dssp EECCHHHHT
T ss_pred CcCchhhhc
Confidence 4 344443
No 208
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=60.55 E-value=16 Score=33.18 Aligned_cols=38 Identities=11% Similarity=-0.044 Sum_probs=28.8
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcC
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 359 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~ 359 (439)
.+|..+||++.... ..+..|+.+|..+|..+.+.+...
T Consensus 288 ~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~~ 325 (333)
T 1vdc_A 288 PGVFAAGDVQDKKY----RQAITAAGTGCMAALDAEHYLQEI 325 (333)
T ss_dssp TTEEECGGGGCSSC----CCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEeeeccCCCc----hhHHHHHHhHHHHHHHHHHHHHhc
Confidence 56999999987531 245678888989998888877643
No 209
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=60.43 E-value=10 Score=38.79 Aligned_cols=50 Identities=14% Similarity=0.001 Sum_probs=38.8
Q ss_pred HHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC--cEEEecEEEEecCCCc
Q 013625 99 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKS 172 (439)
Q Consensus 99 ~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S 172 (439)
..+.+.+++.| |+++.+++|++++. +++.+. .+| +++.+|.||-|-|...
T Consensus 577 ~~~~~~l~~~G-V~v~~~~~v~~i~~----------------------~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRG-VKMIPGVSYQKIDD----------------------DGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTT-CEEECSCEEEEEET----------------------TEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcC-CEEEeCcEEEEEeC----------------------CeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 44566667776 99999999999964 455555 677 5899999999999754
No 210
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=58.70 E-value=3.5 Score=37.92 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=33.2
Q ss_pred CCEEEEcccccccCCcccccchh--cHHHHHHHHHHHHHhhh
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNL--GFGDASTLSRIIAEGIA 357 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~--al~da~~La~~L~~~~~ 357 (439)
.+|+.+||||..+++....|... +|.++..+|+.+.++|+
T Consensus 284 pGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 284 DNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp BTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 57999999999999888888543 57789999999988765
No 211
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=56.24 E-value=8.6 Score=39.40 Aligned_cols=67 Identities=16% Similarity=0.150 Sum_probs=47.1
Q ss_pred eehHHHHHHHHHHhhcC-CCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEE---eCCCc--EEEecEEE
Q 013625 92 VENKVLHSSLLSCMQNT-EFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLD---LSDGT--SLYAKLVV 165 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~-~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~---~~dg~--~~~adlvV 165 (439)
+....+.+.|.+.+.+. ++++|+.++.|+++..+ .+. .+..+.|. ..+|+ ++.|+.||
T Consensus 163 ~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~---------~~~-------~g~v~Gv~~~~~~~g~~~~i~Ak~VV 226 (662)
T 3gyx_A 163 INGESYKVIVAEAAKNALGQDRIIERIFIVKLLLD---------KNT-------PNRIAGAVGFNLRANEVHIFKANAMV 226 (662)
T ss_dssp EEETSHHHHHHHHHHHHHCTTTEECSEEECCCEEC---------SSS-------TTBEEEEEEEESSSSCEEEEECSEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEe---------CCc-------cceEEEEEEEEcCCCcEEEEEeCEEE
Confidence 45567888898888876 24999999999999871 000 01223332 24564 68999999
Q ss_pred EecCCCchh
Q 013625 166 GADGGKSRV 174 (439)
Q Consensus 166 gADG~~S~v 174 (439)
-|.|..|.+
T Consensus 227 LATGG~g~~ 235 (662)
T 3gyx_A 227 VACGGAVNV 235 (662)
T ss_dssp ECCCCBCSS
T ss_pred ECCCccccc
Confidence 999998864
No 212
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=55.82 E-value=7.8 Score=37.97 Aligned_cols=38 Identities=13% Similarity=0.013 Sum_probs=29.2
Q ss_pred cCCEEEEcccccccCCcccc-----cchhcHHHHHHHHHHHHH
Q 013625 317 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 354 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 354 (439)
..+|..+||++...++..|. -...|..+|..+|..|..
T Consensus 318 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 318 IPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp STTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 46799999999877665553 356788888888888864
No 213
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=55.42 E-value=12 Score=35.70 Aligned_cols=40 Identities=25% Similarity=0.376 Sum_probs=34.4
Q ss_pred CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 110 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 110 ~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+++++.+++|+.+.. ...+|.+.+|+++.+|.||-|.|.+
T Consensus 71 ~i~~~~~~~v~~id~----------------------~~~~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 71 RIDMLTGPEVTALDV----------------------QTRTISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TCEEEESCCEEEEET----------------------TTTEEEETTSCEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEEC----------------------CCCEEEECCCCEEECCEEEEccCCc
Confidence 399999999999976 3346788899999999999999965
No 214
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=53.81 E-value=15 Score=36.47 Aligned_cols=42 Identities=12% Similarity=0.033 Sum_probs=33.9
Q ss_pred CCCcEEEc--CCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 108 TEFQKTIY--PSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 108 ~~~v~v~~--~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
.++|++.. +..+.+++. ++ |.++||+++.+|+||-|.|....
T Consensus 342 ~~nV~lv~~~~~~I~~it~----------------------~g--v~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 342 RPNVEAVAIKENPIREVTA----------------------KG--VVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp STTEEEEETTTSCEEEECS----------------------SE--EEETTCCEEECSEEEECCCBSCS
T ss_pred CCCEEEEeCCCCCccEEec----------------------Ce--EEcCCCCEEECCEEEECCccCcc
Confidence 45688885 778888854 33 77899999999999999998754
No 215
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=53.31 E-value=17 Score=34.46 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=35.0
Q ss_pred cCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 107 NTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 107 ~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+.+ ++++.+++|+.+.. ....|.+.+|+++.+|.||-|.|.+
T Consensus 77 ~~~-i~~~~~~~v~~id~----------------------~~~~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 77 DKA-VEMKLGAEVVSLDP----------------------AAHTVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp HTT-EEEEETCCEEEEET----------------------TTTEEEETTSCEEEEEEEEECCCEE
T ss_pred HCC-cEEEeCCEEEEEEC----------------------CCCEEEECCCCEEEeeEEEEccCCc
Confidence 344 99999999999976 3346778899999999999999954
No 216
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=52.46 E-value=13 Score=36.48 Aligned_cols=42 Identities=17% Similarity=0.258 Sum_probs=34.8
Q ss_pred CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 110 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 110 ~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
+++++.+++|+++.. ..-+|.+++|+++.+|.||-|.|.+..
T Consensus 104 gv~~~~g~~v~~id~----------------------~~~~V~~~~g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDV----------------------RDNMVKLNDGSQITYEKCLIATGGTPR 145 (493)
T ss_dssp EEEEEETCCEEEEEG----------------------GGTEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CeEEEcCCEEEEEEC----------------------CCCEEEECCCCEEECCEEEECCCCCCC
Confidence 399999999999976 223677889999999999999997543
No 217
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=52.43 E-value=37 Score=32.42 Aligned_cols=32 Identities=3% Similarity=0.144 Sum_probs=27.5
Q ss_pred eeeehHHHHHHHHHHhhcCCCcEEEcCCeeEEe
Q 013625 90 CVVENKVLHSSLLSCMQNTEFQKTIYPSRLTSM 122 (439)
Q Consensus 90 ~~i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i 122 (439)
..++|..+.+.+.+.+.+.++++|+.+ +|+++
T Consensus 93 l~vDR~~f~~~~~~~le~~pni~l~q~-eV~~l 124 (443)
T 3g5s_A 93 LAVDREEFSGYITERLTGHPLLEVVRE-EVREI 124 (443)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEECS-CCCSC
T ss_pred ccCCcHHHHHHHHHHHHcCCCeEEEhh-hhhhh
Confidence 469999999999999999999999854 66665
No 218
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=50.44 E-value=29 Score=34.12 Aligned_cols=62 Identities=10% Similarity=-0.040 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEE--eCCCc---EEEecEEEEecC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLD--LSDGT---SLYAKLVVGADG 169 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~--~~dg~---~~~adlvVgADG 169 (439)
.++.+.+.+.+++.| |+|+.+++++++... .+. .++.+.+. ..+|. ++.+|+||-|-|
T Consensus 250 ~~~~~~~~~~l~~~G-V~v~~~~~v~~v~~~---------~~~-------~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G 312 (519)
T 3qfa_A 250 QDMANKIGEHMEEHG-IKFIRQFVPIKVEQI---------EAG-------TPGRLRVVAQSTNSEEIIEGEYNTVMLAIG 312 (519)
T ss_dssp HHHHHHHHHHHHHTT-CEEEESEEEEEEEEE---------ECC-------TTCEEEEEEEESSSSCEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHCC-CEEEeCCeEEEEEEc---------cCC-------CCceEEEEEEECCCcEEEEEECCEEEEecC
Confidence 467777888888877 999999999888651 000 11344444 45663 578999999999
Q ss_pred CCch
Q 013625 170 GKSR 173 (439)
Q Consensus 170 ~~S~ 173 (439)
....
T Consensus 313 ~~p~ 316 (519)
T 3qfa_A 313 RDAC 316 (519)
T ss_dssp EEES
T ss_pred Cccc
Confidence 7543
No 219
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.14 E-value=13 Score=34.69 Aligned_cols=39 Identities=8% Similarity=-0.066 Sum_probs=31.8
Q ss_pred CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 110 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 110 ~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+++++.+++|+.+.. ...+|. .+|.++.+|.||-|-|.+
T Consensus 74 ~v~~~~g~~v~~id~----------------------~~~~V~-~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDR----------------------GRKVVI-TEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp TEEEECSCCEEEEET----------------------TTTEEE-ESSCEEECSEEEECCCEE
T ss_pred CcEEEECCEEEEEEC----------------------CCCEEE-ECCcEEECCEEEECCCCC
Confidence 399999999999965 234455 678899999999999964
No 220
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=50.03 E-value=16 Score=33.41 Aligned_cols=36 Identities=14% Similarity=0.060 Sum_probs=25.5
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhh
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 357 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 357 (439)
.+|+.+||++.... .-+..|+.++..+|..+...+.
T Consensus 281 ~~iya~GD~~~~~~----~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 281 PGVFAAGDLVDRTY----RQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp TTEEECGGGTCCSC----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeeecCCccH----HHHHHHHHhHHHHHHHHHHHhh
Confidence 56999999997532 2355677778888877776654
No 221
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=49.87 E-value=14 Score=35.03 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=29.3
Q ss_pred cCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhc
Q 013625 317 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAV 358 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~ 358 (439)
..+|+.+||+++.-.|-. +..|...|..+|..|...+..
T Consensus 299 ~~~vfa~GD~~~~~~~~~---~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 299 YDNVYAVGDANSMTVPKL---GYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp CTTEEECGGGBTTCCSCC---HHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEeehhccCCCCcH---HHHHHHHHHHHHHHHHHHhcC
Confidence 368999999998633322 356888889999999887743
No 222
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=49.35 E-value=10 Score=36.30 Aligned_cols=43 Identities=12% Similarity=-0.067 Sum_probs=31.5
Q ss_pred cCCEEEEcccccccCCc-------ccccchhcHHHHHHHHHHHHHhhhcC
Q 013625 317 SKRVVLIGDAAHTVHPL-------AGQGVNLGFGDASTLSRIIAEGIAVG 359 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~-------~g~G~~~al~da~~La~~L~~~~~~~ 359 (439)
..+|+.+||+++..+|. .-.-+..|...|..+|..|...+...
T Consensus 286 ~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 286 YKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp STTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 47899999999876431 11234578889999999998887643
No 223
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=48.16 E-value=25 Score=34.02 Aligned_cols=53 Identities=15% Similarity=0.109 Sum_probs=37.6
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC--cEEEecEEEEecCCCch
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKSR 173 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S~ 173 (439)
+...+.+.+.+.+ ++++.++.+ .+. ...++|...+| .++.+|.||-|.|.+..
T Consensus 95 l~~~~~~~~~~~~-v~~~~g~~~-~i~----------------------~~~~~v~~~~G~~~~~~~d~lviAtG~~p~ 149 (468)
T 2qae_A 95 LTGGVEYLFKKNK-VTYYKGEGS-FET----------------------AHSIRVNGLDGKQEMLETKKTIIATGSEPT 149 (468)
T ss_dssp HHHHHHHHHHHHT-CEEEEEEEE-EEE----------------------TTEEEEEETTSCEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHhCC-CEEEEEEEE-Eee----------------------CCEEEEEecCCceEEEEcCEEEECCCCCcC
Confidence 3334445555555 999998754 343 26688888888 68999999999997544
No 224
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=46.82 E-value=38 Score=32.67 Aligned_cols=49 Identities=8% Similarity=-0.002 Sum_probs=38.0
Q ss_pred HHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcE--EEecEEEEecCCC
Q 013625 99 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTS--LYAKLVVGADGGK 171 (439)
Q Consensus 99 ~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~--~~adlvVgADG~~ 171 (439)
..+.+.+.+.+ ++++.+ +++.+.. ..+.|..++|++ +.+|.||-|-|..
T Consensus 93 ~~~~~~~~~~~-v~~~~g-~v~~id~----------------------~~~~V~~~~g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 93 QHKRNMSQYET-LTFYKG-YVKIKDP----------------------THVIVKTDEGKEIEAETRYMIIASGAE 143 (466)
T ss_dssp HHHHHHTTCTT-EEEESE-EEEEEET----------------------TEEEEEETTSCEEEEEEEEEEECCCEE
T ss_pred chHHHHHHhCC-CEEEEe-EEEEecC----------------------CeEEEEcCCCcEEEEecCEEEECCCCC
Confidence 44555555555 999888 6777744 678888999988 9999999999963
No 225
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=46.64 E-value=12 Score=36.01 Aligned_cols=38 Identities=11% Similarity=0.083 Sum_probs=29.3
Q ss_pred cCCEEEEcccccccCCcccc-----cchhcHHHHHHHHHHHHH
Q 013625 317 SKRVVLIGDAAHTVHPLAGQ-----GVNLGFGDASTLSRIIAE 354 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~~g~-----G~~~al~da~~La~~L~~ 354 (439)
..+|..+||++...++..|. -...|..+|..+|..|..
T Consensus 274 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 274 NRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp STTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCC
Confidence 46899999999987766653 467788888888887753
No 226
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=46.33 E-value=30 Score=34.04 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=36.9
Q ss_pred HHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCcee-EEEeC---CCc--EEEecEEEEecCCC
Q 013625 99 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLA-KLDLS---DGT--SLYAKLVVGADGGK 171 (439)
Q Consensus 99 ~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~~---dg~--~~~adlvVgADG~~ 171 (439)
..|.+.+.+..+++|+.+++++++.. +++.+ .|.+. +|+ ++.+|.||-|-|..
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~--------------------~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKG--------------------DGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEE--------------------CSSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEc--------------------CCCcEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 45666676644599999999999975 22333 45554 354 68899999988843
No 227
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=45.21 E-value=7 Score=39.00 Aligned_cols=55 Identities=5% Similarity=0.098 Sum_probs=40.1
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEc--CCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIY--PSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADG 169 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~--~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG 169 (439)
..|..+..-+++.+.+ ++|+++. +..|.+++. .+ |.+.|| ++.+|+||-|-|
T Consensus 335 ~kR~~~~~~y~~al~~-~nV~lv~~~~~~I~~it~----------------------~g--v~~~dG-~~~~D~IV~ATG 388 (545)
T 3uox_A 335 AKRVPMETNYYETYNR-DNVHLVDIREAPIQEVTP----------------------EG--IKTADA-AYDLDVIIYATG 388 (545)
T ss_dssp SSCCCEESSHHHHTTS-TTEEEEETTTSCEEEEET----------------------TE--EEESSC-EEECSEEEECCC
T ss_pred CCccCCCccHHHHhcC-CCEEEEecCCCCceEEcc----------------------Ce--EEeCCC-eeecCEEEECCc
Confidence 4444444445555554 4699986 789999865 33 667899 999999999999
Q ss_pred CCc
Q 013625 170 GKS 172 (439)
Q Consensus 170 ~~S 172 (439)
...
T Consensus 389 f~~ 391 (545)
T 3uox_A 389 FDA 391 (545)
T ss_dssp CBS
T ss_pred ccc
Confidence 864
No 228
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=44.64 E-value=48 Score=33.13 Aligned_cols=68 Identities=16% Similarity=0.129 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEE--EeCCCcEEE--ecEEEEecCC
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKL--DLSDGTSLY--AKLVVGADGG 170 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v--~~~dg~~~~--adlvVgADG~ 170 (439)
..+...+.+.+.+.| +++++++++.++.... .....+. ..+.+.+ .+.+|+++. +|.||-|-|.
T Consensus 326 ~~~~~~~~~~l~~~g-v~i~~~~~v~~v~~~~----~~~~~~~-------~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 326 QQMAEKVGDYMENHG-VKFAKLCVPDEIKQLK----VVDTENN-------KPGLLLVKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp HHHHHHHHHHHHHTT-CEEEETEEEEEEEEEE----CCBTTTT-------BCCEEEEEEEETTSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCC-CEEEECCeEEEEEecc----ccccccC-------CCceEEEEEEeCCCcEEeccCCEEEEEeCC
Confidence 456667777777776 9999999888885400 0000000 1234444 456887655 9999999997
Q ss_pred Cchh
Q 013625 171 KSRV 174 (439)
Q Consensus 171 ~S~v 174 (439)
....
T Consensus 394 ~p~~ 397 (598)
T 2x8g_A 394 EPQL 397 (598)
T ss_dssp EECG
T ss_pred cccc
Confidence 6543
No 229
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=44.27 E-value=28 Score=33.34 Aligned_cols=45 Identities=11% Similarity=0.080 Sum_probs=34.1
Q ss_pred CCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe-CCCc--EEEecEEEEecCCCch
Q 013625 108 TEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL-SDGT--SLYAKLVVGADGGKSR 173 (439)
Q Consensus 108 ~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~dg~--~~~adlvVgADG~~S~ 173 (439)
.+ ++++.+++|+++.. .+..+.+.. .+|+ ++.+|.||-|.|.+..
T Consensus 69 ~g-v~~~~~~~v~~i~~--------------------~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 69 RG-VNVFSNTEITAIQP--------------------KEHQVTVKDLVSGEERVENYDKLIISPGAVPF 116 (447)
T ss_dssp TT-CEEEETEEEEEEET--------------------TTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred CC-CEEEECCEEEEEeC--------------------CCCEEEEEecCCCceEEEeCCEEEEcCCCCcC
Confidence 44 89999999999976 345566655 4565 4899999999996543
No 230
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=42.89 E-value=20 Score=34.74 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=23.9
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhh
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 357 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 357 (439)
.+|..+||++.. |.. .+..|+.+|..+|..|...+.
T Consensus 352 pgvya~GD~~~g--p~~--~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 352 PNEYVVGWIKRG--PTG--VIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp SSEEECTHHHHC--SCS--CTTHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCC--Cch--hHHHHHHHHHHHHHHHHHHHH
Confidence 468999999863 221 134677888888877766543
No 231
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=42.55 E-value=16 Score=35.24 Aligned_cols=50 Identities=10% Similarity=0.078 Sum_probs=34.4
Q ss_pred HHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 100 SLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 100 ~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
.+.+.+.+.+ ++++.++.+. + +...+.|.. +|.++.+|.||-|.|.+..+
T Consensus 94 ~~~~~~~~~~-v~~~~g~~~~-i----------------------~~~~~~v~~-~g~~~~~d~lviAtG~~p~~ 143 (455)
T 2yqu_A 94 GVEFLFKKNG-IARHQGTARF-L----------------------SERKVLVEE-TGEELEARYILIATGSAPLI 143 (455)
T ss_dssp HHHHHHHHHT-CEEEESCEEE-S----------------------SSSEEEETT-TCCEEEEEEEEECCCEEECC
T ss_pred HHHHHHHhCC-CEEEEeEEEE-e----------------------cCCeEEEee-CCEEEEecEEEECCCCCCCC
Confidence 3444455445 8999987542 3 225566766 78899999999999975543
No 232
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=41.49 E-value=36 Score=33.03 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=36.5
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc--EEEecEEEEecCCCc
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT--SLYAKLVVGADGGKS 172 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~--~~~adlvVgADG~~S 172 (439)
+...+.+.+.+.+ ++++.++ ++.+. ...+.|...+|+ ++.+|.||-|.|.+.
T Consensus 107 ~~~~~~~~~~~~g-v~~~~g~-~~~i~----------------------~~~~~v~~~~g~~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 107 LNGIYQKNLEKEK-VDVVFGW-ARFNK----------------------DGNVEVQKRDNTTEVYSANHILVATGGKA 160 (479)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE-EEECT----------------------TSCEEEEESSSCCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHhCC-CEEEEeE-EEEee----------------------CCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 3344455555555 9998884 55552 255778888887 899999999999643
No 233
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=39.14 E-value=28 Score=33.41 Aligned_cols=46 Identities=9% Similarity=0.133 Sum_probs=34.9
Q ss_pred hcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe-CCCcEEEecEEEEecCCCc
Q 013625 106 QNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL-SDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 106 ~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~dg~~~~adlvVgADG~~S 172 (439)
.+.+ ++++.+++|+++.. ....+.+.. .++.++.+|.||-|.|.+.
T Consensus 69 ~~~g-i~~~~~~~V~~id~--------------------~~~~v~v~~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 69 RRQK-IQLLLNREVVAMDV--------------------ENQLIAWTRKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp HHTT-EEEECSCEEEEEET--------------------TTTEEEEEETTEEEEEECSEEEECCCCCB
T ss_pred HHCC-CEEEECCEEEEEEC--------------------CCCEEEEEecCceEEEEcCEEEECCCccc
Confidence 3345 89999999999976 345666652 3456899999999999854
No 234
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=38.47 E-value=39 Score=32.85 Aligned_cols=56 Identities=9% Similarity=0.170 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEcCC--eeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCc
Q 013625 95 KVLHSSLLSCMQNTEFQKTIYPS--RLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 95 ~~l~~~L~~~~~~~~~v~v~~~~--~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S 172 (439)
..|-+.|.+.+.+ .+|++++ +|++|.. +++++ ++.+|+++.||.||-|=....
T Consensus 216 ~~l~~~la~~l~~---~~i~~~~~~~V~~I~~--------------------~~~~v--~~~~G~~~~ad~VI~a~p~~~ 270 (484)
T 4dsg_A 216 GIIYQAIKEKLPS---EKLTFNSGFQAIAIDA--------------------DAKTI--TFSNGEVVSYDYLISTVPFDN 270 (484)
T ss_dssp HHHHHHHHHHSCG---GGEEECGGGCEEEEET--------------------TTTEE--EETTSCEEECSEEEECSCHHH
T ss_pred HHHHHHHHhhhhh---CeEEECCCceeEEEEe--------------------cCCEE--EECCCCEEECCEEEECCCHHH
Confidence 4455555555532 3789994 5999976 33444 568899999999999887655
Q ss_pred hhh
Q 013625 173 RVR 175 (439)
Q Consensus 173 ~vR 175 (439)
..+
T Consensus 271 ~~~ 273 (484)
T 4dsg_A 271 LLR 273 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 235
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=38.37 E-value=23 Score=33.99 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=33.5
Q ss_pred CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc-EEEecEEEEecCCC
Q 013625 110 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT-SLYAKLVVGADGGK 171 (439)
Q Consensus 110 ~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~-~~~adlvVgADG~~ 171 (439)
+++++.+++|+++.. ....|...+|. ++.+|.||-|-|.+
T Consensus 73 gi~v~~~~~v~~i~~----------------------~~~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 73 GIDLHLNAEVIEVDT----------------------GYVRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp TCEEETTCEEEEECS----------------------SEEEEECSSSEEEEECSEEEECCCEE
T ss_pred CcEEEecCEEEEEec----------------------CCCEEEECCceEEEEcCEEEECCCCC
Confidence 499999999999965 55677777774 89999999999964
No 236
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=37.86 E-value=31 Score=33.33 Aligned_cols=36 Identities=14% Similarity=0.229 Sum_probs=26.2
Q ss_pred CCEEEEcccccccCCccccc-chhcHHHHHHHHHHHHHhhhc
Q 013625 318 KRVVLIGDAAHTVHPLAGQG-VNLGFGDASTLSRIIAEGIAV 358 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G-~~~al~da~~La~~L~~~~~~ 358 (439)
.+|..+||++.. | .| +..|+.+|..+|..|...+..
T Consensus 360 p~vya~Gd~~~g--~---~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 360 PGLYCSGWVKRG--P---TGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp TTEEECTHHHHC--T---TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcC--C---CccHHHHHHHHHHHHHHHHHHHHh
Confidence 458999999853 2 23 457888888888888776654
No 237
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=37.77 E-value=56 Score=31.75 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=39.1
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCc--EEEecEEEEecCCCch
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGT--SLYAKLVVGADGGKSR 173 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~--~~~adlvVgADG~~S~ 173 (439)
+...+.+.+.+.+ ++++.++ ++.+.. ..+. ....+.|..++|+ ++.+|.||-|.|.+..
T Consensus 97 ~~~~~~~~~~~~g-v~~~~g~-~~~i~~---------~~~~-------~~~~~~V~~~~g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 97 QSADITAQLLSMG-VQVIAGR-GELIDS---------TPGL-------ARHRIKATAADGSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp HHHHHHHHHHHTT-CEEEESE-EEECCS---------SSCC-------SSEEEEEECTTSCEEEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHhCC-CEEEEeE-EEEecC---------cccC-------CCCEEEEEeCCCcEEEEEeCEEEEcCCCCCC
Confidence 4444556666665 9999985 655532 0000 1256788888887 8999999999997543
No 238
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=36.52 E-value=40 Score=32.98 Aligned_cols=55 Identities=11% Similarity=0.141 Sum_probs=36.2
Q ss_pred HHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe--CCC-----cEEEecEEEEecCCC
Q 013625 100 SLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL--SDG-----TSLYAKLVVGADGGK 171 (439)
Q Consensus 100 ~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~dg-----~~~~adlvVgADG~~ 171 (439)
.++..+.+.++++|+.+++|++|..+ .+ ....+.|.+ .+| .++.|+-||-|-|..
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~---------~~--------g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQT---------KD--------GGYALTVEQKDTDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEEC---------TT--------SSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEEC---------CC--------CCEEEEEEEeCCCCccceeEEEeeCEEEEccCCC
Confidence 34455556677999999999999871 00 012444555 366 368888777777764
No 239
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=35.70 E-value=42 Score=31.40 Aligned_cols=41 Identities=10% Similarity=-0.016 Sum_probs=33.2
Q ss_pred cEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCchh
Q 013625 111 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 111 v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~v 174 (439)
++++.+ +|++|+. ..-.+.+.+|.++.+|.||-|-|.....
T Consensus 70 v~~i~~-~v~~id~----------------------~~~~v~~~~g~~i~yd~LviAtG~~~~~ 110 (401)
T 3vrd_B 70 IQVVHD-SALGIDP----------------------DKKLVKTAGGAEFAYDRCVVAPGIDLLY 110 (401)
T ss_dssp CEEECS-CEEEEET----------------------TTTEEEETTSCEEECSEEEECCCEEECG
T ss_pred CEEEEe-EEEEEEc----------------------cCcEEEecccceeecceeeeccCCcccc
Confidence 898776 7889865 3446788999999999999999976544
No 240
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=34.66 E-value=58 Score=32.10 Aligned_cols=57 Identities=9% Similarity=-0.003 Sum_probs=38.4
Q ss_pred HHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC---Cc--EE---EecEEEEec
Q 013625 97 LHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---GT--SL---YAKLVVGAD 168 (439)
Q Consensus 97 l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~--~~---~adlvVgAD 168 (439)
-...+++.+.+.++++|+.++.|++|..+ .+....|.+.+ |+ ++ .++-||-|-
T Consensus 197 ~~~~~l~~~~~~~~~~i~~~~~V~~i~~~-------------------~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaa 257 (546)
T 1kdg_A 197 PVATYLQTALARPNFTFKTNVMVSNVVRN-------------------GSQILGVQTNDPTLGPNGFIPVTPKGRVILSA 257 (546)
T ss_dssp HHHTHHHHHHTCTTEEEECSCCEEEEEEE-------------------TTEEEEEEESCTTSSGGGEEEEEEEEEEEECS
T ss_pred HHHHHHHHHhhCCCcEEEeCCEEEEEEEe-------------------CCEEEEEEEEecCCCceeEEEEEeCCEEEEcC
Confidence 33445666666567999999999999870 12334556644 64 33 788899888
Q ss_pred CCCc
Q 013625 169 GGKS 172 (439)
Q Consensus 169 G~~S 172 (439)
|...
T Consensus 258 G~~~ 261 (546)
T 1kdg_A 258 GAFG 261 (546)
T ss_dssp HHHH
T ss_pred Chhc
Confidence 8753
No 241
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=34.21 E-value=57 Score=33.63 Aligned_cols=25 Identities=0% Similarity=0.040 Sum_probs=20.0
Q ss_pred HHHHHHhhcCCCcEEEcCCeeEEeee
Q 013625 99 SSLLSCMQNTEFQKTIYPSRLTSMAL 124 (439)
Q Consensus 99 ~~L~~~~~~~~~v~v~~~~~v~~i~~ 124 (439)
..+.+.+++.| |+++++++|+++..
T Consensus 575 ~~~~~~l~~~G-V~i~~~~~v~~i~~ 599 (729)
T 1o94_A 575 PNMMRRLHELH-VEELGDHFCSRIEP 599 (729)
T ss_dssp HHHHHHHHHTT-CEEECSEEEEEEET
T ss_pred HHHHHHHHhCC-CEEEcCcEEEEEEC
Confidence 45666677776 99999999999964
No 242
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=33.03 E-value=49 Score=32.79 Aligned_cols=40 Identities=10% Similarity=0.049 Sum_probs=30.1
Q ss_pred CCcEEE--cCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 109 EFQKTI--YPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 109 ~~v~v~--~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
++|++. ....|.++.. .+ |.+.|| ++.+|+||-|-|....
T Consensus 356 ~~V~lvd~~~~~I~~it~----------------------~g--v~~~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 356 DNVELVDLRSTPIVGMDE----------------------TG--IVTTGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp TTEEEEETTTSCEEEEET----------------------TE--EEESSC-EEECSEEEECCCEEES
T ss_pred CCEEEEeCCCCCceEEeC----------------------Cc--EEeCCC-ceecCEEEECCccccc
Confidence 467776 2467878754 33 667899 9999999999997643
No 243
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=32.67 E-value=25 Score=36.19 Aligned_cols=39 Identities=18% Similarity=0.150 Sum_probs=29.6
Q ss_pred cCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcC
Q 013625 317 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 359 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~ 359 (439)
.|||.++||+.- . ..|- +--||++|...+..+...+..+
T Consensus 644 ~gri~fAGe~~S-~--~~GW-ieGAl~Sa~~Aa~~i~~~~~~~ 682 (721)
T 3ayj_A 644 DNRFFIASDSYS-H--LGGW-LEGAFMSALNAVAGLIVRANRG 682 (721)
T ss_dssp CCCEEECSGGGS-S--CTTS-HHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEeehhhc-c--CCce-ehHHHHHHHHHHHHHHHHhcCC
Confidence 599999999994 2 2222 6778999999998888876543
No 244
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=32.60 E-value=42 Score=32.33 Aligned_cols=33 Identities=27% Similarity=0.260 Sum_probs=24.1
Q ss_pred cCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHH
Q 013625 317 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAE 354 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~ 354 (439)
..+|..+||++.. |. -...|..+|..+|..|..
T Consensus 301 ~~~Iya~GD~~~~--~~---l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 301 VPGVYAIGDAARP--PL---LAHKAMREGLIAAENAAG 333 (464)
T ss_dssp STTEEECGGGTCS--SC---CHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeccCCC--cc---cHHHHHHHHHHHHHHhcC
Confidence 3689999999864 21 234688888888888764
No 245
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=32.37 E-value=52 Score=32.18 Aligned_cols=55 Identities=18% Similarity=0.097 Sum_probs=36.1
Q ss_pred HHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccC-ceeEEEeC--CC-----cEEEecEEEEecCC
Q 013625 99 SSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKG-HLAKLDLS--DG-----TSLYAKLVVGADGG 170 (439)
Q Consensus 99 ~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~--dg-----~~~~adlvVgADG~ 170 (439)
..++..+.+.++++|+.+++|++|..+ . ++ ..+.|.+. +| .++.|+-||-|-|.
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~---------~---------~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa 291 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPA---------T---------GSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGS 291 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEEC---------S---------SSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEEC---------C---------CCCEEEEEEEeCCCCcccccEEEEeCEEEEccCc
Confidence 344455555677999999999999871 0 11 23445553 56 36888877777776
Q ss_pred C
Q 013625 171 K 171 (439)
Q Consensus 171 ~ 171 (439)
.
T Consensus 292 ~ 292 (507)
T 1coy_A 292 V 292 (507)
T ss_dssp H
T ss_pred c
Confidence 4
No 246
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=32.07 E-value=30 Score=32.38 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=32.0
Q ss_pred hcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCCch
Q 013625 106 QNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 106 ~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~S~ 173 (439)
.+.+ ++++.+++|+.+.. ... +|.+.+ .++.+|.||-|.|.+..
T Consensus 71 ~~~~-v~~~~~~~v~~i~~--------------------~~~--~v~~~~-~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 71 EQLN-ARILTHTRVTGIDP--------------------GHQ--RIWIGE-EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp HHTT-CEEECSCCCCEEEG--------------------GGT--EEEETT-EEEECSEEEECCCEEEC
T ss_pred HhCC-cEEEeCCEEEEEEC--------------------CCC--EEEECC-cEEECCEEEEeCCCCcC
Confidence 3444 99999999999975 223 344544 47999999999997543
No 247
>3nk4_C ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_C*
Probab=31.87 E-value=24 Score=18.68 Aligned_cols=12 Identities=33% Similarity=0.667 Sum_probs=7.6
Q ss_pred CCcEEEecEEEE
Q 013625 155 DGTSLYAKLVVG 166 (439)
Q Consensus 155 dg~~~~adlvVg 166 (439)
.|+++.+|+|||
T Consensus 6 agkevaadvvig 17 (30)
T 3nk4_C 6 AGKEVAADVVIG 17 (30)
T ss_dssp ---CEEEEEEEE
T ss_pred cccceecceEEe
Confidence 366788888887
No 248
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=31.56 E-value=1.5e+02 Score=25.99 Aligned_cols=59 Identities=15% Similarity=0.201 Sum_probs=44.0
Q ss_pred eehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 92 VENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 92 i~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+...+|...+.+.+.+.+ +++..+ .+..... ......+...++.++.+|-||-|-|.+
T Consensus 63 i~~~~l~~~~~~~~~~~~-~~~~~~-~v~~~~~--------------------~~~~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 63 IDGNELMMNMRTQSEKYG-TTIITE-TIDHVDF--------------------STQPFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp EEHHHHHHHHHHHHHHTT-CEEECC-CEEEEEC--------------------SSSSEEEEETTCCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHhhcC-cEEEEe-EEEEeec--------------------CCCceEEEECCCeEEEEeEEEEccccc
Confidence 566778888888888776 676654 4555544 345667778889999999999999974
Q ss_pred c
Q 013625 172 S 172 (439)
Q Consensus 172 S 172 (439)
.
T Consensus 121 ~ 121 (314)
T 4a5l_A 121 A 121 (314)
T ss_dssp E
T ss_pred c
Confidence 3
No 249
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=31.41 E-value=56 Score=30.67 Aligned_cols=39 Identities=28% Similarity=0.261 Sum_probs=32.5
Q ss_pred CcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCCcEEEecEEEEecCCC
Q 013625 110 FQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDGTSLYAKLVVGADGGK 171 (439)
Q Consensus 110 ~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~~~~adlvVgADG~~ 171 (439)
+++++. .+|+++.. ..-.|.+.+|+++.+|.||-|.|.+
T Consensus 71 ~i~~~~-~~v~~id~----------------------~~~~v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 71 AIELIS-DRMVSIDR----------------------EGRKLLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp TEEEEC-CCEEEEET----------------------TTTEEEESSSCEEECSEEEECCCEE
T ss_pred CCEEEE-EEEEEEEC----------------------CCCEEEECCCCEEECCEEEEeeCCC
Confidence 399999 99999976 2336778899999999999999963
No 250
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=28.76 E-value=87 Score=31.13 Aligned_cols=44 Identities=7% Similarity=0.036 Sum_probs=34.5
Q ss_pred cCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe-CCCc--EEEecEEEEecCCC
Q 013625 107 NTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL-SDGT--SLYAKLVVGADGGK 171 (439)
Q Consensus 107 ~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~dg~--~~~adlvVgADG~~ 171 (439)
+.+ ++++++++|+++.. ....+.+.. .+|+ ++.+|.||-|-|.+
T Consensus 105 ~~g-i~v~~~~~V~~id~--------------------~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 105 RFN-LDIRVLSEVVKINK--------------------EEKTITIKNVTTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp HTT-CEEECSEEEEEEET--------------------TTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred hcC-cEEEECCEEEEEEC--------------------CCCEEEEeecCCCCEEEEeCCEEEECCCCC
Confidence 344 99999999999976 446666664 4566 78999999999964
No 251
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=25.19 E-value=59 Score=34.81 Aligned_cols=51 Identities=12% Similarity=0.055 Sum_probs=34.8
Q ss_pred HHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCccccccc-Ccee-EEEeCC-------C--cEEEecEEEEecCC
Q 013625 102 LSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTK-GHLA-KLDLSD-------G--TSLYAKLVVGADGG 170 (439)
Q Consensus 102 ~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~v-~v~~~d-------g--~~~~adlvVgADG~ 170 (439)
.+.+++.| |+|+.+++|+++.. . ++.+ .|++.+ | +++.+|.||-|-|.
T Consensus 323 ~~~l~~~G-V~v~~~~~v~~i~~--------------------~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADG-VQVISGSVVVDTEA--------------------DENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTT-CCEEETEEEEEEEE--------------------CTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCC-eEEEeCCEeEEEec--------------------cCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 34455555 99999999999965 1 1222 344433 5 68999999999997
Q ss_pred Cch
Q 013625 171 KSR 173 (439)
Q Consensus 171 ~S~ 173 (439)
...
T Consensus 382 ~P~ 384 (965)
T 2gag_A 382 NPV 384 (965)
T ss_dssp EEC
T ss_pred CcC
Confidence 443
No 252
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=24.64 E-value=69 Score=29.44 Aligned_cols=38 Identities=21% Similarity=0.418 Sum_probs=33.9
Q ss_pred cCCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhhcC
Q 013625 317 SKRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIAVG 359 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~~~ 359 (439)
..||.++| ++|+.|+|..++-|+...+..+|.+..+.+
T Consensus 204 ~PrIAV~g-----LNPHAGE~G~~G~EE~~iI~PAi~~lr~~G 241 (334)
T 3lxy_A 204 QPQIYVCG-----LNPHAGEGGHMGHEEIDTIIPALNTLRQQG 241 (334)
T ss_dssp SCCEEEEC-----SSGGGGGGGTTCSHHHHTHHHHHHHHHHTT
T ss_pred CCCEEEEe-----cCCCCCCCCCCCchhHHHHHHHHHHHHHCC
Confidence 47899999 999999999999999999999999876544
No 253
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=24.28 E-value=93 Score=30.61 Aligned_cols=22 Identities=18% Similarity=0.057 Sum_probs=19.0
Q ss_pred EEeCCCcEEEecEEEEecCCCch
Q 013625 151 LDLSDGTSLYAKLVVGADGGKSR 173 (439)
Q Consensus 151 v~~~dg~~~~adlvVgADG~~S~ 173 (439)
|.++| +++.+|+||-|-|....
T Consensus 371 v~~~d-~~~~~D~ii~atG~~~~ 392 (542)
T 1w4x_A 371 VRTSE-REYELDSLVLATGFDAL 392 (542)
T ss_dssp EEESS-CEEECSEEEECCCCCCT
T ss_pred EEeCC-eEEecCEEEEcCCcccc
Confidence 66778 89999999999998753
No 254
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=24.20 E-value=84 Score=31.42 Aligned_cols=55 Identities=13% Similarity=0.178 Sum_probs=33.4
Q ss_pred HhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe--CCCc--EEEec--EEEEecCCCch
Q 013625 104 CMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL--SDGT--SLYAK--LVVGADGGKSR 173 (439)
Q Consensus 104 ~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~dg~--~~~ad--lvVgADG~~S~ 173 (439)
.+.+.+|++|+.++.|++|..++..+ ....+.|.+ .+|. ++.|+ +|+.|=+.+|+
T Consensus 235 p~~~r~NL~V~t~a~V~rIl~d~~~~---------------~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SP 295 (583)
T 3qvp_A 235 PNYQRPNLQVLTGQYVGKVLLSQNGT---------------TPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSP 295 (583)
T ss_dssp TTTTCTTEEEECSCEEEEEEEECSSS---------------SCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHH
T ss_pred HhhcCCCcEEEcCCEEEEEEeccCCC---------------CCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCH
Confidence 33445679999999999998821100 112334444 4665 67775 55555556777
No 255
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=23.39 E-value=91 Score=29.79 Aligned_cols=34 Identities=29% Similarity=0.424 Sum_probs=26.0
Q ss_pred CCEEEEcccccccCCcccccchhcHHHHHHHHHHHHHhhh
Q 013625 318 KRVVLIGDAAHTVHPLAGQGVNLGFGDASTLSRIIAEGIA 357 (439)
Q Consensus 318 ~rvvLvGDAAh~~~P~~g~G~~~al~da~~La~~L~~~~~ 357 (439)
+++.++||+. .|.|+.-|+.+|..+|+.|...+.
T Consensus 441 ~~l~~aG~~~------~g~gv~gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 441 PGLHLIGNAY------KGVGLNDCIRNAAQLADALVAGNT 474 (478)
T ss_dssp TTEEECSTTT------SCCSHHHHHHHHHHHHHHHCC---
T ss_pred CCEEEEccCC------CCCCHHHHHHHHHHHHHHHHHhhc
Confidence 7899999984 256789999999999988866543
No 256
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=23.02 E-value=51 Score=21.81 Aligned_cols=21 Identities=24% Similarity=0.343 Sum_probs=16.4
Q ss_pred CCCCChHHHHHHHHHhhchhh
Q 013625 359 GADIGEASLLKKYEAERKPAN 379 (439)
Q Consensus 359 ~~~~~~~~~l~~Ye~~r~~~~ 379 (439)
++++....+|..|++.|+-..
T Consensus 41 GKnWDl~AAL~D~eqLrqvh~ 61 (73)
T 2l2d_A 41 GKNWDLTAALSDYEQLRQVHT 61 (73)
T ss_dssp HTTTCHHHHHHHHHHHHHCCS
T ss_pred cCCccHhHHhhhHHHHHHHHh
Confidence 456667899999999997543
No 257
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=22.83 E-value=98 Score=30.02 Aligned_cols=58 Identities=19% Similarity=0.192 Sum_probs=39.4
Q ss_pred ehHHHHHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEe-CCCc--EEEecEEEEecC
Q 013625 93 ENKVLHSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDL-SDGT--SLYAKLVVGADG 169 (439)
Q Consensus 93 ~R~~l~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~dg~--~~~adlvVgADG 169 (439)
...++...+.+.+ +. +++++.+++|.++.. ....+.+.. .+++ ++.+|.||-|.|
T Consensus 159 ~~~~~~~~l~~~l-~~-~v~~~~~~~v~~i~~--------------------~~~~~~~~~~~~~~~~~~~~d~lvlAtG 216 (493)
T 1y56_A 159 DSRKVVEELVGKL-NE-NTKIYLETSALGVFD--------------------KGEYFLVPVVRGDKLIEILAKRVVLATG 216 (493)
T ss_dssp EHHHHHHHHHHTC-CT-TEEEETTEEECCCEE--------------------CSSSEEEEEEETTEEEEEEESCEEECCC
T ss_pred CHHHHHHHHHHHH-hc-CCEEEcCCEEEEEEc--------------------CCcEEEEEEecCCeEEEEECCEEEECCC
Confidence 3445555566655 44 499999999999976 223344433 4554 799999999999
Q ss_pred CCc
Q 013625 170 GKS 172 (439)
Q Consensus 170 ~~S 172 (439)
...
T Consensus 217 a~~ 219 (493)
T 1y56_A 217 AID 219 (493)
T ss_dssp EEE
T ss_pred CCc
Confidence 754
No 258
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=21.99 E-value=93 Score=30.73 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=36.3
Q ss_pred HHHHHHHhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCC---Cc--EEEec-EEEEecCC-
Q 013625 98 HSSLLSCMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSD---GT--SLYAK-LVVGADGG- 170 (439)
Q Consensus 98 ~~~L~~~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~--~~~ad-lvVgADG~- 170 (439)
...++..+.+..+++|+.++.|++|..+ . ++....|.+.+ |. ++.|+ -||-|-|.
T Consensus 211 ~~a~l~~a~~~~~~~i~~~~~V~~i~~~---------~---------~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 211 SVSYIHPIVEQENFTLLTGLRARQLVFD---------A---------DRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HHHHTGGGTTCTTEEEECSCEEEEEEEC---------T---------TSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCEEEEEEEC---------C---------CCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 3444455544456999999999999871 0 02233455432 54 78898 78877776
Q ss_pred Cc
Q 013625 171 KS 172 (439)
Q Consensus 171 ~S 172 (439)
.|
T Consensus 273 ~s 274 (546)
T 2jbv_A 273 DT 274 (546)
T ss_dssp HH
T ss_pred CC
Confidence 44
No 259
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=21.86 E-value=62 Score=31.28 Aligned_cols=44 Identities=7% Similarity=-0.148 Sum_probs=32.9
Q ss_pred cEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCce------eEEEeC--CC---cEEEecEEEEecCCCchh
Q 013625 111 QKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHL------AKLDLS--DG---TSLYAKLVVGADGGKSRV 174 (439)
Q Consensus 111 v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------v~v~~~--dg---~~~~adlvVgADG~~S~v 174 (439)
++|+++++|++|.. .+++ +.|++. +| +++.||.||-|-...-..
T Consensus 256 ~~i~~~~~V~~I~~--------------------~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~ 310 (504)
T 1sez_A 256 DELRLNSRVLELSC--------------------SCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVK 310 (504)
T ss_dssp TTEETTCCEEEEEE--------------------ECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHH
T ss_pred ceEEcCCeEEEEEe--------------------cCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHH
Confidence 68999999999987 2222 666664 56 678999999998865443
No 260
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=21.62 E-value=96 Score=29.69 Aligned_cols=46 Identities=9% Similarity=0.040 Sum_probs=33.8
Q ss_pred HhhcCCCcEEEcCCeeEEeeeCCCCCCcccCCCCCcccccccCceeEEEeCCC--cEEEecEEEEecCCCc
Q 013625 104 CMQNTEFQKTIYPSRLTSMALLPSSSSISVDSTPSATTLFTKGHLAKLDLSDG--TSLYAKLVVGADGGKS 172 (439)
Q Consensus 104 ~~~~~~~v~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg--~~~~adlvVgADG~~S 172 (439)
.+.+.++++++.+. ++.+.. ..++|...+| .++.+|.||-|.|.+.
T Consensus 103 ~~~~~~~v~~~~g~-~~~~~~----------------------~~~~v~~~~g~~~~~~~d~lviAtGs~p 150 (467)
T 1zk7_A 103 ILGGNPAITVVHGE-ARFKDD----------------------QSLTVRLNEGGERVVMFDRCLVATGASP 150 (467)
T ss_dssp HHTTCTTEEEEEEE-EEEEET----------------------TEEEEEETTSSEEEEECSEEEECCCEEE
T ss_pred HHhccCCeEEEEEE-EEEccC----------------------CEEEEEeCCCceEEEEeCEEEEeCCCCC
Confidence 34444249998874 666643 6788888888 6899999999999643
No 261
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=21.24 E-value=85 Score=30.18 Aligned_cols=23 Identities=17% Similarity=0.176 Sum_probs=19.7
Q ss_pred EEEeCCCcEEEecEEEEecCCCc
Q 013625 150 KLDLSDGTSLYAKLVVGADGGKS 172 (439)
Q Consensus 150 ~v~~~dg~~~~adlvVgADG~~S 172 (439)
.|.++||+++.+|.||-|-|...
T Consensus 254 ~V~~~dG~~i~~D~Vi~atG~~p 276 (464)
T 2xve_A 254 NAYFADGSSEKVDAIILCTGYIH 276 (464)
T ss_dssp EEEETTSCEEECSEEEECCCBCC
T ss_pred EEEECCCCEEeCCEEEECCCCCC
Confidence 47788999999999999999653
No 262
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=20.33 E-value=1e+02 Score=30.33 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=29.2
Q ss_pred cCCEEEEcccccccCCccccc-----chhcHHHHHHHHHHHHH
Q 013625 317 SKRVVLIGDAAHTVHPLAGQG-----VNLGFGDASTLSRIIAE 354 (439)
Q Consensus 317 ~~rvvLvGDAAh~~~P~~g~G-----~~~al~da~~La~~L~~ 354 (439)
..+|..+||++...++..|.- ...|..+|..+|+.|..
T Consensus 295 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 295 DPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp STTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 368999999998777766643 55788888888888754
Done!