Query 013638
Match_columns 439
No_of_seqs 184 out of 1319
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 14:19:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013638.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013638hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 7E-154 2E-158 1207.9 28.8 389 31-439 2-391 (555)
2 1pj3_A NAD-dependent malic enz 100.0 2E-153 7E-158 1207.6 28.1 393 29-439 2-396 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 4E-153 1E-157 1209.0 27.1 396 24-439 31-429 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 7.4E-86 2.5E-90 682.3 21.6 278 95-439 36-323 (487)
5 2a9f_A Putative malic enzyme ( 100.0 8.7E-79 3E-83 622.0 13.2 262 106-439 19-285 (398)
6 1vl6_A Malate oxidoreductase; 100.0 4.9E-75 1.7E-79 593.3 14.8 264 104-439 21-290 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 1.8E-55 6.3E-60 456.0 15.5 262 107-438 18-291 (439)
8 3gvp_A Adenosylhomocysteinase 98.4 4.9E-07 1.7E-11 93.9 9.8 150 243-432 112-299 (435)
9 1x13_A NAD(P) transhydrogenase 98.4 2.5E-07 8.6E-12 94.4 5.8 216 155-432 25-284 (401)
10 3h9u_A Adenosylhomocysteinase; 98.2 8.3E-07 2.8E-11 92.2 5.5 108 289-432 173-290 (436)
11 3ond_A Adenosylhomocysteinase; 97.5 0.0001 3.5E-09 77.6 6.9 108 289-432 227-344 (488)
12 1l7d_A Nicotinamide nucleotide 97.4 0.0013 4.5E-08 66.2 12.8 228 155-432 18-286 (384)
13 3n58_A Adenosylhomocysteinase; 97.1 0.00093 3.2E-08 69.9 7.8 108 289-432 209-326 (464)
14 4dio_A NAD(P) transhydrogenase 96.5 0.0011 3.6E-08 68.4 2.8 95 323-432 190-304 (405)
15 1a4i_A Methylenetetrahydrofola 96.4 0.0036 1.2E-07 62.2 6.3 130 253-428 79-228 (301)
16 3p2o_A Bifunctional protein fo 96.2 0.0068 2.3E-07 59.8 6.9 130 253-428 77-223 (285)
17 3l07_A Bifunctional protein fo 96.2 0.0067 2.3E-07 59.9 6.8 83 300-428 141-224 (285)
18 4a5o_A Bifunctional protein fo 96.1 0.0083 2.8E-07 59.2 6.6 83 300-428 141-224 (286)
19 1b0a_A Protein (fold bifunctio 96.0 0.0067 2.3E-07 60.0 5.5 130 253-428 77-222 (288)
20 3p2y_A Alanine dehydrogenase/p 95.9 0.0025 8.7E-08 65.1 2.0 94 324-432 185-294 (381)
21 3ngx_A Bifunctional protein fo 95.8 0.01 3.5E-07 58.3 6.0 128 253-428 70-213 (276)
22 3k92_A NAD-GDH, NAD-specific g 95.8 0.06 2E-06 55.8 11.8 172 242-430 125-316 (424)
23 4fcc_A Glutamate dehydrogenase 95.7 0.33 1.1E-05 50.7 16.9 169 241-432 139-340 (450)
24 4a26_A Putative C-1-tetrahydro 95.7 0.012 4.2E-07 58.4 6.0 130 253-428 81-230 (300)
25 3d4o_A Dipicolinate synthase s 95.5 0.028 9.5E-07 54.2 7.8 136 262-432 93-236 (293)
26 3aoe_E Glutamate dehydrogenase 95.4 0.096 3.3E-06 54.2 11.6 117 243-374 123-258 (419)
27 1edz_A 5,10-methylenetetrahydr 95.3 0.011 3.7E-07 59.2 4.1 102 303-428 151-266 (320)
28 2c2x_A Methylenetetrahydrofola 95.2 0.02 6.9E-07 56.4 5.4 132 253-428 76-223 (281)
29 3r3j_A Glutamate dehydrogenase 95.1 0.28 9.7E-06 51.3 14.3 169 242-431 144-344 (456)
30 3aog_A Glutamate dehydrogenase 95.1 0.12 4.1E-06 53.8 11.3 169 243-430 140-331 (440)
31 2yfq_A Padgh, NAD-GDH, NAD-spe 94.9 0.16 5.6E-06 52.4 11.6 171 243-430 116-313 (421)
32 2bma_A Glutamate dehydrogenase 93.5 0.68 2.3E-05 48.6 12.9 168 243-432 158-358 (470)
33 2tmg_A Protein (glutamate dehy 93.4 0.66 2.3E-05 47.9 12.5 171 243-430 114-306 (415)
34 3d64_A Adenosylhomocysteinase; 93.3 0.12 4.1E-06 54.5 6.8 99 298-432 258-356 (494)
35 1v8b_A Adenosylhomocysteinase; 93.0 0.17 5.8E-06 53.1 7.4 103 294-432 234-336 (479)
36 2o4c_A Erythronate-4-phosphate 93.0 0.54 1.9E-05 47.8 11.0 88 263-367 56-148 (380)
37 3fbt_A Chorismate mutase and s 92.9 0.1 3.5E-06 50.9 5.3 49 305-367 107-155 (282)
38 3jyo_A Quinate/shikimate dehyd 92.9 0.12 4.1E-06 50.2 5.7 141 252-418 51-204 (283)
39 3tnl_A Shikimate dehydrogenase 92.8 0.13 4.3E-06 51.1 5.8 50 304-367 138-187 (315)
40 1pjc_A Protein (L-alanine dehy 92.7 0.053 1.8E-06 53.9 3.0 90 321-432 165-259 (361)
41 3t4e_A Quinate/shikimate dehyd 92.7 0.13 4.3E-06 51.0 5.6 49 305-367 133-181 (312)
42 3o8q_A Shikimate 5-dehydrogena 92.5 0.12 4.1E-06 50.2 5.0 97 252-367 50-159 (281)
43 3tum_A Shikimate dehydrogenase 92.4 0.14 4.9E-06 49.6 5.5 48 305-366 110-157 (269)
44 3don_A Shikimate dehydrogenase 92.3 0.082 2.8E-06 51.4 3.6 57 289-367 94-150 (277)
45 3ce6_A Adenosylhomocysteinase; 92.2 0.39 1.3E-05 50.5 9.0 88 312-432 266-353 (494)
46 1lu9_A Methylene tetrahydromet 92.2 0.72 2.5E-05 43.8 10.1 86 266-367 60-152 (287)
47 3pwz_A Shikimate dehydrogenase 91.9 0.12 4.2E-06 49.9 4.3 99 252-367 44-153 (272)
48 2ekl_A D-3-phosphoglycerate de 91.4 1.2 4E-05 43.7 10.8 93 261-367 64-174 (313)
49 2eez_A Alanine dehydrogenase; 90.9 0.42 1.4E-05 47.5 7.2 91 320-432 163-258 (369)
50 1nyt_A Shikimate 5-dehydrogena 90.9 0.27 9.1E-06 46.8 5.5 49 304-367 103-151 (271)
51 2egg_A AROE, shikimate 5-dehyd 90.9 0.23 7.9E-06 48.2 5.2 49 305-367 125-174 (297)
52 2hk9_A Shikimate dehydrogenase 90.7 0.31 1.1E-05 46.4 5.8 48 305-367 114-161 (275)
53 1bgv_A Glutamate dehydrogenase 90.6 6 0.00021 41.2 15.7 172 244-432 136-336 (449)
54 3oet_A Erythronate-4-phosphate 90.4 0.75 2.6E-05 46.9 8.6 64 289-367 85-151 (381)
55 1p77_A Shikimate 5-dehydrogena 90.4 0.23 7.9E-06 47.3 4.6 49 304-367 103-151 (272)
56 1wwk_A Phosphoglycerate dehydr 90.2 1 3.5E-05 44.0 9.1 93 261-367 62-174 (307)
57 3kkj_A Amine oxidase, flavin-c 90.0 0.17 5.8E-06 43.0 2.9 32 324-367 3-34 (336)
58 3k5p_A D-3-phosphoglycerate de 89.8 1.7 5.7E-05 44.8 10.6 92 262-367 77-188 (416)
59 3rui_A Ubiquitin-like modifier 89.6 0.15 5.2E-06 51.3 2.8 38 321-369 32-69 (340)
60 1c1d_A L-phenylalanine dehydro 89.5 6.7 0.00023 39.5 14.6 109 243-367 90-207 (355)
61 3h8v_A Ubiquitin-like modifier 88.3 0.33 1.1E-05 47.7 4.0 37 321-368 34-70 (292)
62 2vhw_A Alanine dehydrogenase; 88.1 0.29 1E-05 49.0 3.6 91 320-432 165-260 (377)
63 1sc6_A PGDH, D-3-phosphoglycer 87.8 2.7 9.4E-05 42.8 10.6 92 262-367 66-177 (404)
64 2rir_A Dipicolinate synthase, 87.8 0.5 1.7E-05 45.4 4.9 90 312-432 149-238 (300)
65 1jw9_B Molybdopterin biosynthe 87.7 0.27 9.1E-06 46.5 2.8 34 324-368 32-65 (249)
66 1leh_A Leucine dehydrogenase; 87.5 0.74 2.5E-05 46.5 6.1 100 249-366 93-204 (364)
67 2j6i_A Formate dehydrogenase; 87.5 2.5 8.4E-05 42.4 9.9 96 261-367 80-197 (364)
68 3mw9_A GDH 1, glutamate dehydr 87.2 2 6.9E-05 45.4 9.4 119 242-374 135-284 (501)
69 1zud_1 Adenylyltransferase THI 87.1 0.25 8.6E-06 46.8 2.3 101 324-439 29-147 (251)
70 2qrj_A Saccharopine dehydrogen 87.1 1.2 4E-05 45.8 7.3 71 323-430 214-289 (394)
71 3h5n_A MCCB protein; ubiquitin 86.6 0.39 1.3E-05 48.0 3.5 100 324-439 119-238 (353)
72 4b4u_A Bifunctional protein fo 86.1 1.2 4.3E-05 44.1 6.7 131 253-429 97-243 (303)
73 1npy_A Hypothetical shikimate 86.0 0.69 2.4E-05 44.6 4.7 48 305-367 105-152 (271)
74 1nvt_A Shikimate 5'-dehydrogen 85.9 0.73 2.5E-05 44.0 4.8 49 303-367 111-159 (287)
75 1v9l_A Glutamate dehydrogenase 85.8 4 0.00014 42.1 10.6 116 243-374 115-250 (421)
76 3vrd_B FCCB subunit, flavocyto 85.5 0.59 2E-05 45.7 4.1 35 323-367 2-36 (401)
77 4gsl_A Ubiquitin-like modifier 85.4 0.37 1.3E-05 52.1 2.8 35 324-369 327-361 (615)
78 3ba1_A HPPR, hydroxyphenylpyru 85.3 2 6.9E-05 42.5 7.9 67 289-367 111-196 (333)
79 1pzg_A LDH, lactate dehydrogen 85.2 0.43 1.5E-05 47.1 2.9 97 324-437 10-126 (331)
80 1y8q_A Ubiquitin-like 1 activa 85.2 0.48 1.6E-05 47.2 3.3 34 324-368 37-70 (346)
81 3u62_A Shikimate dehydrogenase 84.9 0.52 1.8E-05 45.0 3.3 79 306-417 97-175 (253)
82 3gvx_A Glycerate dehydrogenase 84.8 2.8 9.6E-05 40.8 8.5 38 319-368 118-155 (290)
83 3vh1_A Ubiquitin-like modifier 84.8 0.35 1.2E-05 52.1 2.2 36 322-368 326-361 (598)
84 1hyu_A AHPF, alkyl hydroperoxi 84.4 0.3 1E-05 50.5 1.5 103 251-367 134-244 (521)
85 2dbq_A Glyoxylate reductase; D 83.7 3.6 0.00012 40.5 8.8 93 261-367 63-182 (334)
86 4g2n_A D-isomer specific 2-hyd 83.7 2.2 7.6E-05 42.6 7.4 69 288-368 117-206 (345)
87 3jtm_A Formate dehydrogenase, 83.3 2.6 8.8E-05 42.2 7.7 93 262-367 83-196 (351)
88 2gcg_A Glyoxylate reductase/hy 83.2 2.1 7.1E-05 42.0 6.9 90 264-367 75-187 (330)
89 2rcy_A Pyrroline carboxylate r 83.1 2.4 8.3E-05 38.9 6.9 36 324-367 5-40 (262)
90 3hg7_A D-isomer specific 2-hyd 83.0 1.6 5.4E-05 43.3 5.9 58 299-368 103-173 (324)
91 2d5c_A AROE, shikimate 5-dehyd 83.0 1.4 4.7E-05 41.4 5.2 47 305-367 102-148 (263)
92 1gtm_A Glutamate dehydrogenase 81.9 8.9 0.0003 39.3 11.2 168 243-430 114-309 (419)
93 4hy3_A Phosphoglycerate oxidor 81.7 2.2 7.4E-05 43.1 6.5 58 298-367 133-208 (365)
94 4dgs_A Dehydrogenase; structur 81.4 4.1 0.00014 40.6 8.2 67 289-367 117-203 (340)
95 3u95_A Glycoside hydrolase, fa 81.2 0.67 2.3E-05 48.3 2.6 80 325-415 2-83 (477)
96 2yq5_A D-isomer specific 2-hyd 81.0 6.1 0.00021 39.4 9.4 111 289-432 94-228 (343)
97 1tt5_B Ubiquitin-activating en 80.8 0.69 2.3E-05 47.8 2.5 34 324-368 41-74 (434)
98 1gpj_A Glutamyl-tRNA reductase 80.7 2.9 9.9E-05 42.1 7.0 119 277-429 129-249 (404)
99 4fgw_A Glycerol-3-phosphate de 80.4 1.9 6.4E-05 44.1 5.5 97 324-435 35-142 (391)
100 4hb9_A Similarities with proba 80.3 0.96 3.3E-05 43.3 3.2 32 324-367 2-33 (412)
101 3phh_A Shikimate dehydrogenase 80.3 0.96 3.3E-05 43.8 3.2 43 306-367 108-150 (269)
102 2cuk_A Glycerate dehydrogenase 80.1 4.5 0.00015 39.5 8.0 67 289-367 89-176 (311)
103 3evt_A Phosphoglycerate dehydr 79.8 4.3 0.00015 40.1 7.8 94 261-368 57-170 (324)
104 3fbs_A Oxidoreductase; structu 79.5 1.1 3.8E-05 40.8 3.2 32 324-367 3-34 (297)
105 4e21_A 6-phosphogluconate dehy 79.5 2.6 8.9E-05 42.1 6.1 82 324-434 23-105 (358)
106 3kb6_A D-lactate dehydrogenase 79.0 11 0.00038 37.2 10.5 94 260-367 59-173 (334)
107 3d1c_A Flavin-containing putat 79.0 1.2 4E-05 42.5 3.3 34 324-368 5-38 (369)
108 4a9w_A Monooxygenase; baeyer-v 79.0 0.91 3.1E-05 42.4 2.5 33 324-368 4-36 (357)
109 1t2d_A LDH-P, L-lactate dehydr 78.8 0.42 1.4E-05 47.0 0.1 96 324-437 5-120 (322)
110 1qp8_A Formate dehydrogenase; 78.6 4.2 0.00014 39.6 7.2 93 262-368 47-157 (303)
111 1mld_A Malate dehydrogenase; o 78.2 1.8 6.1E-05 42.3 4.4 95 325-438 2-112 (314)
112 3f8d_A Thioredoxin reductase ( 78.1 1.3 4.5E-05 40.8 3.3 36 324-371 16-53 (323)
113 1y8q_B Anthracycline-, ubiquit 78.0 1.1 3.7E-05 48.8 3.0 34 324-368 18-51 (640)
114 3pp8_A Glyoxylate/hydroxypyruv 77.4 3.4 0.00012 40.6 6.2 93 264-368 58-172 (315)
115 3iwa_A FAD-dependent pyridine 77.2 1.4 4.9E-05 44.3 3.5 36 324-369 4-39 (472)
116 2zbw_A Thioredoxin reductase; 77.1 1.4 4.9E-05 41.3 3.3 33 324-368 6-38 (335)
117 3lzw_A Ferredoxin--NADP reduct 77.1 1.4 4.7E-05 41.0 3.1 33 324-368 8-40 (332)
118 3m6i_A L-arabinitol 4-dehydrog 76.8 3.1 0.00011 40.4 5.7 58 294-366 155-212 (363)
119 3h8l_A NADH oxidase; membrane 76.8 1.6 5.5E-05 42.8 3.7 36 324-368 2-37 (409)
120 2nac_A NAD-dependent formate d 76.7 2.8 9.7E-05 42.7 5.5 92 263-367 111-223 (393)
121 2g1u_A Hypothetical protein TM 76.7 1.9 6.6E-05 36.8 3.7 32 324-367 20-51 (155)
122 4ej6_A Putative zinc-binding d 76.5 4.7 0.00016 39.6 7.0 58 294-366 158-215 (370)
123 1obb_A Maltase, alpha-glucosid 76.3 1.1 3.7E-05 47.0 2.3 80 323-416 3-85 (480)
124 2hjr_A Malate dehydrogenase; m 76.1 0.59 2E-05 46.0 0.3 96 324-437 15-125 (328)
125 3itj_A Thioredoxin reductase 1 75.9 1.2 4.1E-05 41.5 2.3 31 324-366 23-53 (338)
126 2hmt_A YUAA protein; RCK, KTN, 75.8 1.4 4.9E-05 35.9 2.6 32 324-367 7-38 (144)
127 4eez_A Alcohol dehydrogenase 1 75.6 4.8 0.00016 38.6 6.6 48 304-366 149-196 (348)
128 3hyw_A Sulfide-quinone reducta 75.4 2 7E-05 42.9 4.0 34 324-367 3-36 (430)
129 3fg2_P Putative rubredoxin red 75.2 2.5 8.7E-05 41.6 4.6 35 324-368 2-36 (404)
130 2ywl_A Thioredoxin reductase r 75.0 1.9 6.6E-05 37.0 3.3 35 324-370 2-37 (180)
131 3oj0_A Glutr, glutamyl-tRNA re 74.9 0.75 2.6E-05 38.9 0.6 77 324-426 22-99 (144)
132 3oz2_A Digeranylgeranylglycero 74.8 1.6 5.4E-05 41.3 2.9 31 325-367 6-36 (397)
133 1pl8_A Human sorbitol dehydrog 74.7 4.2 0.00014 39.5 6.0 49 303-366 156-204 (356)
134 3axb_A Putative oxidoreductase 74.4 2.7 9.1E-05 41.6 4.5 32 324-366 24-55 (448)
135 3c85_A Putative glutathione-re 74.2 2.4 8.1E-05 37.0 3.7 34 323-367 39-72 (183)
136 2q7v_A Thioredoxin reductase; 73.9 1.9 6.6E-05 40.4 3.3 32 324-367 9-40 (325)
137 3r9u_A Thioredoxin reductase; 73.6 1.8 6.1E-05 39.8 2.9 32 324-367 5-37 (315)
138 1lss_A TRK system potassium up 73.6 2.4 8.3E-05 34.4 3.4 32 324-367 5-36 (140)
139 2jae_A L-amino acid oxidase; o 73.4 1.7 5.8E-05 43.6 2.9 34 324-369 12-45 (489)
140 3kd9_A Coenzyme A disulfide re 73.3 2.5 8.5E-05 42.3 4.1 37 323-369 3-39 (449)
141 3llv_A Exopolyphosphatase-rela 73.3 2.2 7.6E-05 35.5 3.1 32 324-367 7-38 (141)
142 3alj_A 2-methyl-3-hydroxypyrid 73.2 2.1 7.1E-05 41.5 3.4 34 324-369 12-45 (379)
143 3rp8_A Flavoprotein monooxygen 73.1 2.2 7.5E-05 41.7 3.5 34 323-368 23-56 (407)
144 1hdo_A Biliverdin IX beta redu 73.1 4.9 0.00017 34.6 5.4 88 324-433 4-101 (206)
145 3cgv_A Geranylgeranyl reductas 73.1 1.6 5.6E-05 41.7 2.6 34 324-369 5-38 (397)
146 3ic5_A Putative saccharopine d 73.1 2.1 7.4E-05 33.7 2.9 87 324-433 6-92 (118)
147 2vdc_G Glutamate synthase [NAD 73.0 2.3 7.7E-05 43.5 3.7 34 323-368 122-155 (456)
148 2xdo_A TETX2 protein; tetracyc 73.0 2 6.8E-05 42.0 3.2 33 324-368 27-59 (398)
149 3cty_A Thioredoxin reductase; 72.9 2.1 7.3E-05 40.0 3.3 32 324-367 17-48 (319)
150 3s5w_A L-ornithine 5-monooxyge 72.8 2.6 8.9E-05 41.9 4.0 38 324-368 31-68 (463)
151 1ryi_A Glycine oxidase; flavop 72.8 2 6.8E-05 41.1 3.1 34 324-369 18-51 (382)
152 2zyd_A 6-phosphogluconate dehy 72.7 3 0.0001 43.2 4.6 33 323-367 15-47 (480)
153 1yvv_A Amine oxidase, flavin-c 72.6 2.1 7E-05 40.1 3.1 33 324-368 3-35 (336)
154 1id1_A Putative potassium chan 72.4 2.6 9E-05 35.8 3.5 33 323-367 3-35 (153)
155 1y6j_A L-lactate dehydrogenase 72.4 5.3 0.00018 39.0 6.1 93 324-437 8-117 (318)
156 3dme_A Conserved exported prot 72.4 2.3 7.8E-05 40.0 3.3 32 324-367 5-36 (369)
157 3lxd_A FAD-dependent pyridine 71.8 3.5 0.00012 40.6 4.7 36 324-369 10-45 (415)
158 3fwz_A Inner membrane protein 71.7 3 0.0001 35.0 3.7 32 324-367 8-39 (140)
159 2gf3_A MSOX, monomeric sarcosi 71.6 2.2 7.6E-05 40.8 3.1 35 324-370 4-38 (389)
160 1y56_B Sarcosine oxidase; dehy 71.6 2.2 7.5E-05 40.9 3.1 33 324-368 6-38 (382)
161 3ab1_A Ferredoxin--NADP reduct 71.5 2.4 8.2E-05 40.5 3.3 33 324-368 15-47 (360)
162 3k7m_X 6-hydroxy-L-nicotine ox 71.5 2.3 8E-05 41.5 3.3 34 324-369 2-35 (431)
163 4e5n_A Thermostable phosphite 71.3 3.9 0.00013 40.4 4.8 93 263-368 65-178 (330)
164 1pqw_A Polyketide synthase; ro 71.1 7.4 0.00025 34.1 6.2 50 303-367 22-72 (198)
165 3ics_A Coenzyme A-disulfide re 70.9 2.8 9.5E-05 43.5 3.9 36 324-369 37-72 (588)
166 1lqt_A FPRA; NADP+ derivative, 70.8 2.7 9.2E-05 42.8 3.7 38 323-367 3-42 (456)
167 2vou_A 2,6-dihydroxypyridine h 70.7 2.7 9.3E-05 41.0 3.6 33 324-368 6-38 (397)
168 4g6h_A Rotenone-insensitive NA 70.7 1.5 5E-05 45.4 1.7 32 324-367 43-74 (502)
169 3ef6_A Toluene 1,2-dioxygenase 70.6 4.6 0.00016 40.0 5.2 36 324-369 3-38 (410)
170 1tt5_A APPBP1, amyloid protein 70.6 1.5 5.2E-05 46.3 1.8 34 324-368 33-66 (531)
171 3pdi_B Nitrogenase MOFE cofact 70.5 5.1 0.00017 41.3 5.7 183 149-417 177-384 (458)
172 3qsg_A NAD-binding phosphogluc 70.4 6.3 0.00022 37.9 6.0 33 324-367 25-57 (312)
173 4a2c_A Galactitol-1-phosphate 70.3 8.4 0.00029 36.8 6.9 55 297-366 139-193 (346)
174 4e12_A Diketoreductase; oxidor 70.1 2.6 9E-05 39.9 3.2 32 324-367 5-36 (283)
175 3c96_A Flavin-containing monoo 70.1 2.7 9.1E-05 41.3 3.4 34 324-368 5-38 (410)
176 3abi_A Putative uncharacterize 70.0 1.4 4.8E-05 43.4 1.3 84 324-433 17-100 (365)
177 2uzz_A N-methyl-L-tryptophan o 70.0 2.4 8.3E-05 40.3 3.0 35 324-370 3-37 (372)
178 2g76_A 3-PGDH, D-3-phosphoglyc 69.9 12 0.00039 37.1 7.9 94 261-367 85-197 (335)
179 2gag_B Heterotetrameric sarcos 69.8 2.7 9.3E-05 40.4 3.3 35 324-368 22-56 (405)
180 2x3n_A Probable FAD-dependent 69.8 2.5 8.7E-05 41.0 3.1 33 324-368 7-39 (399)
181 3nix_A Flavoprotein/dehydrogen 69.7 2.2 7.4E-05 41.6 2.6 33 324-368 6-38 (421)
182 3lk7_A UDP-N-acetylmuramoylala 69.6 2.9 9.9E-05 42.5 3.6 36 320-367 6-41 (451)
183 3i6d_A Protoporphyrinogen oxid 69.6 3.6 0.00012 40.3 4.2 38 324-367 6-43 (470)
184 1zk7_A HGII, reductase, mercur 69.5 3 0.0001 41.9 3.6 32 324-367 5-36 (467)
185 2xve_A Flavin-containing monoo 69.5 2.5 8.6E-05 42.9 3.1 39 324-368 3-41 (464)
186 3k96_A Glycerol-3-phosphate de 69.4 5 0.00017 39.9 5.2 87 324-434 30-123 (356)
187 2pi1_A D-lactate dehydrogenase 69.3 10 0.00034 37.5 7.3 95 259-367 58-173 (334)
188 1s6y_A 6-phospho-beta-glucosid 69.2 0.92 3.2E-05 46.9 -0.2 102 324-438 8-147 (450)
189 1c0p_A D-amino acid oxidase; a 69.2 3.4 0.00011 39.6 3.8 33 324-368 7-39 (363)
190 2weu_A Tryptophan 5-halogenase 69.2 2.9 0.0001 42.3 3.5 37 324-369 3-39 (511)
191 3c4a_A Probable tryptophan hyd 69.2 3.3 0.00011 40.2 3.8 34 325-368 2-35 (381)
192 2oln_A NIKD protein; flavoprot 69.1 2.8 9.6E-05 40.6 3.3 35 324-370 5-39 (397)
193 1vdc_A NTR, NADPH dependent th 69.1 2.2 7.5E-05 40.0 2.4 31 324-366 9-39 (333)
194 2bc0_A NADH oxidase; flavoprot 68.9 4 0.00014 41.5 4.5 36 324-368 36-71 (490)
195 3ado_A Lambda-crystallin; L-gu 68.9 2.7 9.3E-05 41.6 3.1 31 324-366 7-37 (319)
196 1u8x_X Maltose-6'-phosphate gl 68.9 0.89 3E-05 47.4 -0.4 102 324-438 29-166 (472)
197 3oc4_A Oxidoreductase, pyridin 68.8 3.1 0.00011 41.7 3.6 36 324-369 3-38 (452)
198 2gqw_A Ferredoxin reductase; f 68.6 3.6 0.00012 40.8 4.0 37 324-370 8-44 (408)
199 4eqs_A Coenzyme A disulfide re 68.6 2.7 9.3E-05 42.3 3.1 34 325-368 2-35 (437)
200 2cul_A Glucose-inhibited divis 68.5 3.1 0.00011 37.8 3.3 32 324-367 4-35 (232)
201 3g3e_A D-amino-acid oxidase; F 68.1 4.5 0.00015 38.5 4.4 38 325-368 2-39 (351)
202 2pv7_A T-protein [includes: ch 68.0 5.5 0.00019 38.0 5.0 32 324-367 22-54 (298)
203 1k0i_A P-hydroxybenzoate hydro 68.0 3.3 0.00011 40.0 3.5 33 324-368 3-35 (394)
204 3uox_A Otemo; baeyer-villiger 67.8 3.1 0.00011 43.5 3.4 33 324-368 10-42 (545)
205 3ntd_A FAD-dependent pyridine 67.7 3.4 0.00012 42.4 3.6 36 324-369 2-37 (565)
206 3fpz_A Thiazole biosynthetic e 67.7 4.6 0.00016 38.4 4.4 34 324-367 66-99 (326)
207 1m6i_A Programmed cell death p 67.6 5 0.00017 41.0 4.9 35 324-368 12-46 (493)
208 2q0l_A TRXR, thioredoxin reduc 67.5 3.2 0.00011 38.4 3.2 33 324-367 2-34 (311)
209 3fpc_A NADP-dependent alcohol 67.5 3.4 0.00012 40.0 3.5 49 303-366 151-199 (352)
210 1f0y_A HCDH, L-3-hydroxyacyl-C 67.4 3.2 0.00011 39.4 3.2 32 324-367 16-47 (302)
211 2nvu_B Maltose binding protein 67.4 2 6.7E-05 47.0 1.9 37 322-369 410-446 (805)
212 3h28_A Sulfide-quinone reducta 67.4 3.1 0.00011 41.3 3.2 35 324-368 3-37 (430)
213 3ka7_A Oxidoreductase; structu 67.3 3.4 0.00011 40.2 3.4 33 325-369 2-34 (425)
214 4gcm_A TRXR, thioredoxin reduc 67.2 3.2 0.00011 38.8 3.1 31 325-367 8-38 (312)
215 2d0i_A Dehydrogenase; structur 67.1 5.4 0.00019 39.2 4.9 37 319-367 142-178 (333)
216 2zqz_A L-LDH, L-lactate dehydr 67.1 2.7 9.1E-05 41.4 2.6 95 324-437 10-119 (326)
217 1e3j_A NADP(H)-dependent ketos 67.0 6.9 0.00024 37.8 5.5 37 303-343 153-189 (352)
218 1trb_A Thioredoxin reductase; 66.9 2.3 7.8E-05 39.5 2.0 32 324-367 6-37 (320)
219 3hdj_A Probable ornithine cycl 66.9 13 0.00045 36.3 7.5 81 324-427 122-203 (313)
220 1xdi_A RV3303C-LPDA; reductase 66.8 3.7 0.00013 41.8 3.7 36 324-368 3-38 (499)
221 3ihm_A Styrene monooxygenase A 66.8 3.4 0.00012 41.2 3.4 32 324-367 23-54 (430)
222 3cmm_A Ubiquitin-activating en 66.8 3.2 0.00011 47.3 3.5 34 324-368 28-61 (1015)
223 3c4n_A Uncharacterized protein 66.8 3.8 0.00013 40.3 3.7 35 324-368 37-71 (405)
224 3nrn_A Uncharacterized protein 66.7 3.5 0.00012 40.4 3.4 33 325-369 2-34 (421)
225 3i3l_A Alkylhalidase CMLS; fla 66.7 3.5 0.00012 43.7 3.6 33 323-367 23-55 (591)
226 1dxl_A Dihydrolipoamide dehydr 66.6 4 0.00014 40.9 3.9 33 324-368 7-39 (470)
227 1xdw_A NAD+-dependent (R)-2-hy 66.5 5.9 0.0002 38.9 5.0 87 267-367 72-178 (331)
228 2a87_A TRXR, TR, thioredoxin r 66.4 3 0.0001 39.4 2.8 32 324-367 15-46 (335)
229 3s2u_A UDP-N-acetylglucosamine 66.4 4.6 0.00016 39.4 4.2 35 324-369 3-42 (365)
230 4egb_A DTDP-glucose 4,6-dehydr 66.3 5.3 0.00018 37.7 4.5 81 323-419 24-109 (346)
231 2cdu_A NADPH oxidase; flavoenz 66.3 4.1 0.00014 40.7 3.9 34 325-368 2-35 (452)
232 1nhp_A NADH peroxidase; oxidor 66.2 4.2 0.00014 40.6 3.9 34 325-368 2-35 (447)
233 2e4g_A Tryptophan halogenase; 66.1 3.3 0.00011 42.9 3.2 37 324-369 26-62 (550)
234 3k30_A Histamine dehydrogenase 65.9 4.1 0.00014 43.6 4.0 33 324-368 392-424 (690)
235 3klj_A NAD(FAD)-dependent dehy 65.9 4.3 0.00015 40.3 3.9 35 324-370 10-44 (385)
236 2p4q_A 6-phosphogluconate dehy 65.8 6.5 0.00022 40.9 5.4 32 324-367 11-42 (497)
237 2dq4_A L-threonine 3-dehydroge 65.8 5.1 0.00017 38.6 4.3 48 303-366 149-197 (343)
238 3sx6_A Sulfide-quinone reducta 65.8 3.3 0.00011 41.3 3.0 36 324-368 5-40 (437)
239 3cgb_A Pyridine nucleotide-dis 65.8 4.1 0.00014 41.3 3.8 36 324-369 37-72 (480)
240 2ewd_A Lactate dehydrogenase,; 65.7 4.8 0.00016 38.9 4.1 33 324-367 5-37 (317)
241 3urh_A Dihydrolipoyl dehydroge 65.5 3.6 0.00012 41.7 3.3 33 324-368 26-58 (491)
242 1mo9_A ORF3; nucleotide bindin 65.4 3.6 0.00012 42.3 3.3 33 324-368 44-76 (523)
243 1x0v_A GPD-C, GPDH-C, glycerol 65.3 5.2 0.00018 38.5 4.3 40 324-368 9-48 (354)
244 4ap3_A Steroid monooxygenase; 65.3 3.4 0.00011 43.3 3.1 33 324-368 22-54 (549)
245 2a8x_A Dihydrolipoyl dehydroge 65.2 3.2 0.00011 41.6 2.9 32 324-367 4-35 (464)
246 3dje_A Fructosyl amine: oxygen 65.2 3.9 0.00013 40.2 3.4 36 324-370 7-42 (438)
247 2eq6_A Pyruvate dehydrogenase 65.0 3.4 0.00012 41.7 3.0 33 324-368 7-39 (464)
248 2r9z_A Glutathione amide reduc 64.9 4 0.00014 41.3 3.5 32 324-367 5-36 (463)
249 1zmd_A Dihydrolipoyl dehydroge 64.9 3.7 0.00013 41.3 3.3 33 324-368 7-39 (474)
250 1ez4_A Lactate dehydrogenase; 64.8 3 0.0001 40.9 2.4 95 324-437 6-115 (318)
251 3fys_A Protein DEGV; fatty aci 64.8 4 0.00014 40.3 3.4 135 170-357 33-178 (315)
252 2yqu_A 2-oxoglutarate dehydrog 64.6 3.8 0.00013 41.0 3.3 33 324-368 2-34 (455)
253 2qae_A Lipoamide, dihydrolipoy 64.5 4 0.00014 41.0 3.4 33 324-368 3-35 (468)
254 3lov_A Protoporphyrinogen oxid 64.3 5.2 0.00018 39.8 4.1 36 324-369 5-40 (475)
255 2hqm_A GR, grase, glutathione 64.2 3.6 0.00012 41.6 3.1 33 324-368 12-44 (479)
256 1fl2_A Alkyl hydroperoxide red 64.2 3.5 0.00012 38.2 2.7 32 324-367 2-33 (310)
257 1ebd_A E3BD, dihydrolipoamide 64.2 3.6 0.00012 41.2 3.0 32 324-367 4-35 (455)
258 3v76_A Flavoprotein; structura 64.1 3.6 0.00012 41.5 3.0 34 324-369 28-61 (417)
259 3qj4_A Renalase; FAD/NAD(P)-bi 64.0 2.6 8.9E-05 40.1 1.8 35 324-367 2-36 (342)
260 2gv8_A Monooxygenase; FMO, FAD 63.8 4.6 0.00016 40.3 3.7 35 324-368 7-41 (447)
261 2raf_A Putative dinucleotide-b 63.8 4.4 0.00015 36.7 3.2 33 323-367 19-51 (209)
262 2d8a_A PH0655, probable L-thre 63.7 4.8 0.00017 38.9 3.7 48 303-366 153-200 (348)
263 3dtt_A NADP oxidoreductase; st 63.6 4.8 0.00016 37.3 3.5 35 321-367 17-51 (245)
264 1mx3_A CTBP1, C-terminal bindi 63.5 17 0.00059 36.0 7.8 94 261-367 81-200 (347)
265 2aqj_A Tryptophan halogenase, 63.5 4 0.00014 41.9 3.2 36 324-368 6-41 (538)
266 2qcu_A Aerobic glycerol-3-phos 63.2 4.1 0.00014 41.6 3.2 33 324-368 4-36 (501)
267 3dfz_A SIRC, precorrin-2 dehyd 63.0 3.3 0.00011 39.0 2.3 26 320-345 28-53 (223)
268 2cdc_A Glucose dehydrogenase g 62.7 13 0.00046 36.0 6.7 33 323-367 181-213 (366)
269 1ges_A Glutathione reductase; 62.7 3.7 0.00013 41.3 2.7 32 324-367 5-36 (450)
270 1b8p_A Protein (malate dehydro 62.7 3.4 0.00012 40.4 2.4 100 324-436 6-126 (329)
271 2bry_A NEDD9 interacting prote 62.6 4.8 0.00016 41.3 3.6 34 324-369 93-126 (497)
272 1w4x_A Phenylacetone monooxyge 62.1 4.3 0.00015 41.9 3.2 33 324-368 17-49 (542)
273 1rsg_A FMS1 protein; FAD bindi 62.1 3.9 0.00013 41.6 2.8 22 324-345 9-30 (516)
274 1onf_A GR, grase, glutathione 62.1 4.4 0.00015 41.4 3.2 33 324-368 3-35 (500)
275 1j4a_A D-LDH, D-lactate dehydr 62.1 8 0.00027 38.0 5.0 68 288-367 93-178 (333)
276 1lvl_A Dihydrolipoamide dehydr 61.9 4.5 0.00015 40.7 3.2 32 324-367 6-37 (458)
277 4a5l_A Thioredoxin reductase; 61.5 3.7 0.00013 38.0 2.3 31 325-367 6-36 (314)
278 3nrc_A Enoyl-[acyl-carrier-pro 61.5 3.4 0.00012 38.6 2.1 38 319-368 22-62 (280)
279 1v59_A Dihydrolipoamide dehydr 61.4 5 0.00017 40.3 3.4 33 324-368 6-38 (478)
280 2bi7_A UDP-galactopyranose mut 61.4 4.6 0.00016 40.0 3.1 33 324-368 4-36 (384)
281 3l8k_A Dihydrolipoyl dehydroge 61.2 4.7 0.00016 40.6 3.2 34 324-369 5-38 (466)
282 1yqd_A Sinapyl alcohol dehydro 61.2 12 0.00041 36.5 6.1 47 305-366 173-219 (366)
283 2e1m_A L-glutamate oxidase; L- 61.1 4.9 0.00017 40.4 3.3 32 324-367 45-76 (376)
284 1q1r_A Putidaredoxin reductase 60.5 5.4 0.00018 39.9 3.5 36 324-369 5-40 (431)
285 1o94_A Tmadh, trimethylamine d 60.5 5 0.00017 43.3 3.5 33 324-368 390-422 (729)
286 3gwf_A Cyclohexanone monooxyge 60.5 3.9 0.00014 42.6 2.6 34 324-368 9-42 (540)
287 4gwg_A 6-phosphogluconate dehy 60.4 11 0.00037 39.4 5.9 87 324-434 5-93 (484)
288 1cjc_A Protein (adrenodoxin re 60.3 5.6 0.00019 40.5 3.6 34 324-367 7-40 (460)
289 2o7s_A DHQ-SDH PR, bifunctiona 60.2 6.8 0.00023 40.8 4.3 35 321-367 362-396 (523)
290 1ojt_A Surface protein; redox- 59.8 5.3 0.00018 40.4 3.4 32 324-367 7-38 (482)
291 2pgd_A 6-phosphogluconate dehy 59.7 8.5 0.00029 39.6 4.9 32 324-367 3-34 (482)
292 4fk1_A Putative thioredoxin re 59.7 5.3 0.00018 37.3 3.1 32 324-367 7-38 (304)
293 2dph_A Formaldehyde dismutase; 59.7 14 0.00047 36.5 6.3 48 304-366 171-218 (398)
294 2i6t_A Ubiquitin-conjugating e 59.6 6.7 0.00023 38.2 3.9 92 324-438 15-120 (303)
295 1dxy_A D-2-hydroxyisocaproate 59.5 9 0.00031 37.7 4.8 69 288-368 91-178 (333)
296 3o0h_A Glutathione reductase; 59.5 5.5 0.00019 40.3 3.4 32 324-367 27-58 (484)
297 2pyx_A Tryptophan halogenase; 59.4 5.2 0.00018 41.0 3.2 38 324-368 8-52 (526)
298 2ew2_A 2-dehydropantoate 2-red 59.3 5.6 0.00019 37.0 3.2 32 324-367 4-35 (316)
299 1x7d_A Ornithine cyclodeaminas 59.1 19 0.00065 35.7 7.2 87 306-417 117-203 (350)
300 3nyc_A D-arginine dehydrogenas 59.0 3.7 0.00013 38.9 1.9 32 324-368 10-41 (381)
301 1ks9_A KPA reductase;, 2-dehyd 58.8 5.8 0.0002 36.5 3.2 31 325-367 2-32 (291)
302 1rp0_A ARA6, thiazole biosynth 58.8 4.8 0.00016 37.8 2.6 34 324-368 40-73 (284)
303 1z82_A Glycerol-3-phosphate de 58.6 6 0.00021 38.1 3.4 32 324-367 15-46 (335)
304 1s3e_A Amine oxidase [flavin-c 58.5 5.6 0.00019 40.3 3.3 35 324-370 5-39 (520)
305 2gqf_A Hypothetical protein HI 58.5 4.3 0.00015 40.5 2.3 34 324-369 5-38 (401)
306 2qa1_A PGAE, polyketide oxygen 58.3 5.6 0.00019 40.8 3.2 33 324-368 12-44 (500)
307 1kol_A Formaldehyde dehydrogen 58.3 13 0.00044 36.5 5.8 48 304-366 171-218 (398)
308 4dgk_A Phytoene dehydrogenase; 58.3 5.3 0.00018 39.9 3.0 22 324-345 2-23 (501)
309 2wpf_A Trypanothione reductase 58.2 7.1 0.00024 39.9 4.0 31 324-365 8-38 (495)
310 3lad_A Dihydrolipoamide dehydr 58.1 6.8 0.00023 39.3 3.8 33 324-368 4-36 (476)
311 4gde_A UDP-galactopyranose mut 58.1 9.6 0.00033 37.9 4.8 33 324-367 11-43 (513)
312 3ihg_A RDME; flavoenzyme, anth 58.0 5 0.00017 41.0 2.8 35 324-370 6-40 (535)
313 2b9w_A Putative aminooxidase; 58.0 5.8 0.0002 38.7 3.2 34 324-368 7-40 (424)
314 4gbj_A 6-phosphogluconate dehy 58.0 7.2 0.00025 37.5 3.8 31 324-366 6-36 (297)
315 3e1t_A Halogenase; flavoprotei 57.9 4.7 0.00016 41.2 2.6 33 324-368 8-40 (512)
316 3dk9_A Grase, GR, glutathione 57.8 5.6 0.00019 40.0 3.1 33 324-368 21-53 (478)
317 2dpo_A L-gulonate 3-dehydrogen 57.6 5.9 0.0002 38.8 3.1 32 324-367 7-38 (319)
318 1wly_A CAAR, 2-haloacrylate re 57.6 13 0.00043 35.6 5.4 51 302-367 128-179 (333)
319 2qa2_A CABE, polyketide oxygen 57.4 6.3 0.00022 40.4 3.5 33 324-368 13-45 (499)
320 2iid_A L-amino-acid oxidase; f 57.3 7.8 0.00027 38.8 4.0 32 324-367 34-65 (498)
321 2i0z_A NAD(FAD)-utilizing dehy 57.2 5.4 0.00018 40.0 2.8 34 324-369 27-60 (447)
322 1v0j_A UDP-galactopyranose mut 57.1 6.5 0.00022 38.9 3.4 33 324-367 8-40 (399)
323 1o6z_A MDH, malate dehydrogena 57.0 3.5 0.00012 39.8 1.4 95 325-438 2-114 (303)
324 2vvm_A Monoamine oxidase N; FA 56.9 6.4 0.00022 39.4 3.3 32 324-367 40-71 (495)
325 1ps9_A 2,4-dienoyl-COA reducta 56.8 5.8 0.0002 42.2 3.1 33 324-368 374-406 (671)
326 2i99_A MU-crystallin homolog; 56.7 15 0.00052 35.4 5.9 33 324-366 136-168 (312)
327 1hyh_A L-hicdh, L-2-hydroxyiso 56.7 7.8 0.00027 37.1 3.8 34 324-367 2-35 (309)
328 2yg5_A Putrescine oxidase; oxi 56.6 6.1 0.00021 38.9 3.1 33 324-368 6-38 (453)
329 1kyq_A Met8P, siroheme biosynt 56.6 4.7 0.00016 39.1 2.2 35 321-367 11-45 (274)
330 2w2k_A D-mandelate dehydrogena 56.6 12 0.0004 37.0 5.1 37 320-367 160-196 (348)
331 3l4b_C TRKA K+ channel protien 56.5 6.7 0.00023 35.2 3.1 31 325-367 2-32 (218)
332 4b63_A L-ornithine N5 monooxyg 56.5 5.7 0.00019 40.8 2.9 23 325-347 41-63 (501)
333 4h08_A Putative hydrolase; GDS 55.9 15 0.00051 31.8 5.2 47 207-270 70-116 (200)
334 3evn_A Oxidoreductase, GFO/IDH 55.9 24 0.00081 33.8 7.1 90 324-438 6-100 (329)
335 3uko_A Alcohol dehydrogenase c 55.9 13 0.00046 36.2 5.4 32 324-366 195-226 (378)
336 1xhc_A NADH oxidase /nitrite r 55.5 7 0.00024 38.2 3.3 33 324-369 9-41 (367)
337 2ph5_A Homospermidine synthase 55.4 15 0.0005 38.7 5.8 36 324-367 14-49 (480)
338 1gdh_A D-glycerate dehydrogena 55.3 10 0.00035 37.0 4.4 67 288-366 90-177 (320)
339 1lld_A L-lactate dehydrogenase 55.1 7.6 0.00026 36.9 3.4 35 324-368 8-42 (319)
340 3ghy_A Ketopantoate reductase 55.1 6.8 0.00023 37.9 3.1 31 324-366 4-34 (335)
341 3ps9_A TRNA 5-methylaminomethy 54.9 6.5 0.00022 41.7 3.1 33 324-368 273-305 (676)
342 1yj8_A Glycerol-3-phosphate de 54.9 9.2 0.00031 37.5 4.0 40 324-368 22-61 (375)
343 1bg6_A N-(1-D-carboxylethyl)-L 54.9 7.6 0.00026 37.1 3.3 32 324-367 5-36 (359)
344 3ek2_A Enoyl-(acyl-carrier-pro 54.8 3.8 0.00013 37.4 1.1 36 320-367 11-49 (271)
345 2r0c_A REBC; flavin adenine di 54.7 6.6 0.00023 40.7 3.1 33 324-368 27-59 (549)
346 4id9_A Short-chain dehydrogena 54.7 14 0.00049 34.7 5.2 71 320-418 16-87 (347)
347 2rgh_A Alpha-glycerophosphate 54.6 6.5 0.00022 41.2 3.1 34 324-369 33-66 (571)
348 3tri_A Pyrroline-5-carboxylate 54.5 12 0.0004 35.5 4.6 36 323-367 3-38 (280)
349 3atr_A Conserved archaeal prot 54.5 3.6 0.00012 41.1 1.1 34 324-369 7-40 (453)
350 1smk_A Malate dehydrogenase, g 54.4 4.5 0.00015 39.6 1.7 95 324-438 9-120 (326)
351 2v3a_A Rubredoxin reductase; a 54.3 6 0.00021 38.5 2.6 34 324-367 5-38 (384)
352 1fec_A Trypanothione reductase 54.2 8.9 0.00031 39.0 3.9 31 324-365 4-34 (490)
353 1gte_A Dihydropyrimidine dehyd 54.2 6.7 0.00023 44.2 3.2 34 324-368 188-221 (1025)
354 2ivd_A PPO, PPOX, protoporphyr 54.1 5.8 0.0002 39.4 2.5 33 324-368 17-49 (478)
355 2zb4_A Prostaglandin reductase 54.1 15 0.00051 35.4 5.3 56 298-366 137-194 (357)
356 4fs3_A Enoyl-[acyl-carrier-pro 54.1 9.2 0.00032 35.5 3.7 35 321-367 4-41 (256)
357 2vns_A Metalloreductase steap3 54.0 7.8 0.00027 35.1 3.1 32 324-367 29-60 (215)
358 4b7c_A Probable oxidoreductase 54.0 16 0.00056 34.7 5.6 51 301-366 131-182 (336)
359 3k6j_A Protein F01G10.3, confi 53.9 7.3 0.00025 40.5 3.2 32 324-367 55-86 (460)
360 1piw_A Hypothetical zinc-type 53.8 20 0.00067 34.8 6.2 45 306-366 167-211 (360)
361 2v6b_A L-LDH, L-lactate dehydr 53.7 8.2 0.00028 37.2 3.4 33 325-367 2-34 (304)
362 3pvc_A TRNA 5-methylaminomethy 53.6 6.2 0.00021 42.1 2.7 33 324-368 265-297 (689)
363 4dna_A Probable glutathione re 53.6 6.8 0.00023 39.3 2.9 32 324-367 6-37 (463)
364 3da1_A Glycerol-3-phosphate de 53.5 6 0.00021 41.3 2.6 32 324-367 19-50 (561)
365 2x5o_A UDP-N-acetylmuramoylala 53.2 5.9 0.0002 40.0 2.4 35 322-368 4-38 (439)
366 1ygy_A PGDH, D-3-phosphoglycer 53.1 25 0.00086 36.7 7.2 93 262-367 63-174 (529)
367 3two_A Mannitol dehydrogenase; 52.9 16 0.00055 35.1 5.3 32 307-342 165-196 (348)
368 1a5z_A L-lactate dehydrogenase 52.8 16 0.00053 35.4 5.2 33 325-367 2-34 (319)
369 3hdq_A UDP-galactopyranose mut 52.7 8.2 0.00028 39.0 3.3 32 324-367 30-61 (397)
370 1f8f_A Benzyl alcohol dehydrog 52.6 20 0.00068 34.8 6.0 32 324-366 192-223 (371)
371 2cf5_A Atccad5, CAD, cinnamyl 52.5 21 0.00072 34.6 6.1 34 307-343 168-201 (357)
372 2h6e_A ADH-4, D-arabinose 1-de 52.4 18 0.00063 34.7 5.6 20 324-343 172-191 (344)
373 3g17_A Similar to 2-dehydropan 52.4 7.6 0.00026 36.8 2.9 22 324-345 3-24 (294)
374 1tt7_A YHFP; alcohol dehydroge 52.2 27 0.00091 33.2 6.7 21 324-344 152-173 (330)
375 3ec7_A Putative dehydrogenase; 52.1 12 0.00041 36.5 4.4 96 320-438 20-120 (357)
376 2gmh_A Electron transfer flavo 52.0 14 0.00048 38.7 5.1 37 324-368 36-74 (584)
377 1y56_A Hypothetical protein PH 51.9 4.1 0.00014 41.6 1.0 32 324-368 109-140 (493)
378 3i83_A 2-dehydropantoate 2-red 51.6 8.7 0.0003 36.9 3.2 32 324-367 3-34 (320)
379 2x8g_A Thioredoxin glutathione 51.4 8.4 0.00029 40.1 3.3 31 324-366 108-138 (598)
380 3nks_A Protoporphyrinogen oxid 51.4 9.2 0.00032 37.8 3.4 35 324-368 3-37 (477)
381 3cmm_A Ubiquitin-activating en 51.1 9.6 0.00033 43.5 3.8 41 323-369 425-465 (1015)
382 1yqg_A Pyrroline-5-carboxylate 51.1 10 0.00035 34.7 3.5 32 325-367 2-33 (263)
383 2j3h_A NADP-dependent oxidored 51.1 15 0.00052 35.0 4.8 40 302-344 138-178 (345)
384 1zcj_A Peroxisomal bifunctiona 51.0 7.4 0.00025 39.9 2.7 32 324-367 38-69 (463)
385 1h2b_A Alcohol dehydrogenase; 51.0 20 0.00067 34.8 5.6 32 307-342 173-206 (359)
386 1pjq_A CYSG, siroheme synthase 50.9 9.9 0.00034 39.0 3.6 34 321-366 10-43 (457)
387 3r6d_A NAD-dependent epimerase 50.7 6.4 0.00022 34.9 1.9 88 324-434 6-99 (221)
388 2fzw_A Alcohol dehydrogenase c 50.6 20 0.00068 34.7 5.6 32 324-366 192-223 (373)
389 1p0f_A NADP-dependent alcohol 50.6 20 0.00068 34.8 5.6 32 324-366 193-224 (373)
390 3ip1_A Alcohol dehydrogenase, 50.5 18 0.0006 35.8 5.3 32 324-366 215-246 (404)
391 3gg9_A D-3-phosphoglycerate de 50.3 14 0.00049 36.7 4.6 69 287-367 97-192 (352)
392 1txg_A Glycerol-3-phosphate de 50.3 10 0.00035 35.9 3.4 30 325-366 2-31 (335)
393 2gjc_A Thiazole biosynthetic e 50.1 10 0.00034 37.6 3.4 36 324-369 66-101 (326)
394 3ic9_A Dihydrolipoamide dehydr 50.0 7.5 0.00026 39.6 2.6 32 324-367 9-40 (492)
395 3ggo_A Prephenate dehydrogenas 50.0 17 0.00058 35.2 5.0 34 324-367 34-67 (314)
396 2b5w_A Glucose dehydrogenase; 49.9 12 0.00042 36.2 4.0 33 324-366 174-207 (357)
397 1qor_A Quinone oxidoreductase; 49.5 22 0.00075 33.7 5.6 49 303-366 124-173 (327)
398 3eag_A UDP-N-acetylmuramate:L- 49.5 9.5 0.00033 36.9 3.1 32 324-367 5-37 (326)
399 1zej_A HBD-9, 3-hydroxyacyl-CO 49.4 9.7 0.00033 37.0 3.1 21 324-345 13-33 (293)
400 1guz_A Malate dehydrogenase; o 49.4 9.5 0.00033 36.8 3.1 33 325-367 2-34 (310)
401 3o38_A Short chain dehydrogena 49.3 10 0.00035 34.7 3.1 36 320-367 19-56 (266)
402 1i8t_A UDP-galactopyranose mut 49.2 7.6 0.00026 38.0 2.4 32 324-367 2-33 (367)
403 3goh_A Alcohol dehydrogenase, 49.2 22 0.00076 33.6 5.6 39 302-344 126-164 (315)
404 1uuf_A YAHK, zinc-type alcohol 49.1 21 0.00073 34.9 5.6 34 305-342 181-214 (369)
405 3s2e_A Zinc-containing alcohol 48.9 16 0.00055 34.9 4.6 44 307-366 155-198 (340)
406 1qo8_A Flavocytochrome C3 fuma 48.9 11 0.00039 39.0 3.8 35 324-370 122-156 (566)
407 1xa0_A Putative NADPH dependen 48.9 25 0.00085 33.4 5.9 20 324-343 151-171 (328)
408 1v3u_A Leukotriene B4 12- hydr 48.8 19 0.00065 34.3 5.0 43 299-344 125-168 (333)
409 2bcg_G Secretory pathway GDP d 48.8 9.5 0.00032 38.3 3.1 35 324-370 12-46 (453)
410 1ldn_A L-lactate dehydrogenase 48.7 20 0.00067 34.8 5.2 95 324-436 7-116 (316)
411 3m2p_A UDP-N-acetylglucosamine 48.7 19 0.00066 33.4 5.0 70 324-419 3-73 (311)
412 3gvi_A Malate dehydrogenase; N 48.4 12 0.0004 37.0 3.6 96 324-437 8-118 (324)
413 3e18_A Oxidoreductase; dehydro 48.2 24 0.00084 34.3 5.9 89 323-438 5-98 (359)
414 3slg_A PBGP3 protein; structur 48.2 22 0.00076 33.8 5.5 77 321-418 22-101 (372)
415 3e8x_A Putative NAD-dependent 48.2 13 0.00043 33.2 3.5 37 319-367 17-54 (236)
416 4gut_A Lysine-specific histone 48.2 13 0.00044 40.9 4.2 35 324-370 337-371 (776)
417 3hn2_A 2-dehydropantoate 2-red 48.1 7.8 0.00027 37.1 2.2 32 324-367 3-34 (312)
418 2qyt_A 2-dehydropantoate 2-red 47.8 11 0.00039 35.2 3.3 22 324-345 9-30 (317)
419 4eye_A Probable oxidoreductase 47.7 14 0.00049 35.5 4.0 48 304-366 144-192 (342)
420 3nlc_A Uncharacterized protein 47.6 6.9 0.00024 41.3 1.9 32 324-367 108-139 (549)
421 1rjw_A ADH-HT, alcohol dehydro 47.6 20 0.00067 34.4 5.0 44 307-366 153-196 (339)
422 3d1l_A Putative NADP oxidoredu 47.5 14 0.00049 33.9 3.9 33 324-367 11-43 (266)
423 3mog_A Probable 3-hydroxybutyr 47.4 9.7 0.00033 39.5 3.0 32 324-367 6-37 (483)
424 3nx4_A Putative oxidoreductase 47.4 27 0.00093 32.9 5.9 31 310-343 137-168 (324)
425 1sez_A Protoporphyrinogen oxid 47.4 9.1 0.00031 38.3 2.7 32 324-367 14-45 (504)
426 1y0p_A Fumarate reductase flav 47.3 15 0.00052 38.0 4.4 35 324-370 127-161 (571)
427 2d4a_B Malate dehydrogenase; a 47.0 13 0.00044 36.1 3.6 95 325-437 1-110 (308)
428 1pn0_A Phenol 2-monooxygenase; 47.0 10 0.00035 40.6 3.1 38 324-368 9-46 (665)
429 3p7m_A Malate dehydrogenase; p 46.9 13 0.00045 36.4 3.7 34 323-367 5-38 (321)
430 1iz0_A Quinone oxidoreductase; 46.8 29 0.00099 32.5 6.0 48 303-366 110-158 (302)
431 1e3i_A Alcohol dehydrogenase, 46.8 21 0.00071 34.7 5.1 32 324-366 197-228 (376)
432 3dhn_A NAD-dependent epimerase 46.7 11 0.00037 33.2 2.8 71 324-417 5-76 (227)
433 1jay_A Coenzyme F420H2:NADP+ o 46.7 11 0.00038 33.3 2.8 31 325-367 2-33 (212)
434 3fmw_A Oxygenase; mithramycin, 46.5 10 0.00035 39.8 3.0 33 324-368 50-82 (570)
435 3qfa_A Thioredoxin reductase 1 46.5 10 0.00036 38.9 3.0 32 324-367 33-64 (519)
436 1vj0_A Alcohol dehydrogenase, 46.3 16 0.00055 35.8 4.2 49 303-366 179-228 (380)
437 2f1k_A Prephenate dehydrogenas 46.2 12 0.00042 34.6 3.2 31 325-367 2-32 (279)
438 2dkh_A 3-hydroxybenzoate hydro 46.2 8 0.00027 41.0 2.1 34 324-368 33-66 (639)
439 1jvb_A NAD(H)-dependent alcoho 46.1 27 0.00091 33.5 5.7 34 306-343 158-192 (347)
440 1pj5_A N,N-dimethylglycine oxi 46.1 11 0.00037 41.1 3.2 36 324-370 5-40 (830)
441 3fef_A Putative glucosidase LP 46.1 17 0.00058 37.7 4.5 76 323-416 5-83 (450)
442 2p2s_A Putative oxidoreductase 46.0 26 0.00088 33.5 5.5 90 323-438 4-99 (336)
443 2jhf_A Alcohol dehydrogenase E 45.9 22 0.00076 34.5 5.1 32 324-366 193-224 (374)
444 2izz_A Pyrroline-5-carboxylate 45.7 13 0.00045 35.8 3.4 36 324-367 23-58 (322)
445 3g0o_A 3-hydroxyisobutyrate de 45.7 13 0.00044 35.3 3.3 32 324-367 8-39 (303)
446 2zxi_A TRNA uridine 5-carboxym 45.6 8.4 0.00029 41.7 2.2 32 324-367 28-59 (637)
447 1qsg_A Enoyl-[acyl-carrier-pro 45.6 6.6 0.00023 36.1 1.2 35 322-368 8-45 (265)
448 3nkl_A UDP-D-quinovosamine 4-d 45.5 15 0.00053 30.3 3.4 22 323-344 4-25 (141)
449 4fb5_A Probable oxidoreductase 45.4 14 0.00049 35.4 3.6 40 397-438 83-127 (393)
450 3dgz_A Thioredoxin reductase 2 45.4 11 0.00036 38.2 2.8 31 324-366 7-37 (488)
451 3ego_A Probable 2-dehydropanto 45.4 12 0.00041 35.8 3.1 20 324-343 3-22 (307)
452 4dsg_A UDP-galactopyranose mut 45.3 13 0.00044 37.9 3.4 33 324-367 10-42 (484)
453 3grf_A Ornithine carbamoyltran 45.2 35 0.0012 34.0 6.4 131 261-414 98-240 (328)
454 1yb5_A Quinone oxidoreductase; 45.0 29 0.001 33.6 5.8 40 302-344 153-193 (351)
455 1cdo_A Alcohol dehydrogenase; 44.7 24 0.00081 34.3 5.1 32 324-366 194-225 (374)
456 4at0_A 3-ketosteroid-delta4-5a 44.6 12 0.00041 38.2 3.1 35 324-370 42-76 (510)
457 3jsk_A Cypbp37 protein; octame 44.4 15 0.00051 36.7 3.7 27 407-433 238-264 (344)
458 1e6u_A GDP-fucose synthetase; 44.3 9.1 0.00031 35.6 2.0 63 323-419 3-66 (321)
459 3b1f_A Putative prephenate deh 44.1 18 0.00062 33.7 4.0 34 324-367 7-40 (290)
460 1y7t_A Malate dehydrogenase; N 44.1 5.8 0.0002 38.3 0.6 98 324-434 5-120 (327)
461 4gqa_A NAD binding oxidoreduct 44.0 20 0.0007 35.3 4.6 107 313-438 18-129 (412)
462 2gag_A Heterotetrameric sarcos 44.0 12 0.0004 42.0 3.1 32 324-367 129-160 (965)
463 3dgh_A TRXR-1, thioredoxin red 43.8 12 0.00041 37.7 2.9 31 324-366 10-40 (483)
464 3qwb_A Probable quinone oxidor 43.5 33 0.0011 32.6 5.9 31 324-366 150-181 (334)
465 3doj_A AT3G25530, dehydrogenas 43.2 17 0.00057 34.7 3.7 32 324-367 22-53 (310)
466 1b37_A Protein (polyamine oxid 43.2 14 0.00048 36.9 3.3 34 324-368 5-38 (472)
467 1oju_A MDH, malate dehydrogena 42.9 17 0.00058 35.3 3.7 97 325-438 2-113 (294)
468 2h78_A Hibadh, 3-hydroxyisobut 42.9 13 0.00043 35.0 2.8 32 324-367 4-35 (302)
469 3pef_A 6-phosphogluconate dehy 42.7 16 0.00054 34.3 3.4 32 324-367 2-33 (287)
470 3lup_A DEGV family protein; PS 42.6 3.1 0.00011 40.3 -1.6 134 172-358 4-148 (285)
471 3qvo_A NMRA family protein; st 42.4 13 0.00043 33.5 2.5 90 324-434 24-116 (236)
472 2uyy_A N-PAC protein; long-cha 42.1 14 0.00047 35.0 2.9 32 324-367 31-62 (316)
473 2z3y_A Lysine-specific histone 42.0 16 0.00055 38.9 3.7 32 324-367 108-139 (662)
474 3vtz_A Glucose 1-dehydrogenase 41.8 53 0.0018 30.3 6.9 36 321-367 12-47 (269)
475 3rkr_A Short chain oxidoreduct 41.4 19 0.00065 33.0 3.6 40 316-367 22-62 (262)
476 3obb_A Probable 3-hydroxyisobu 41.2 21 0.00071 34.5 4.0 31 324-366 4-34 (300)
477 1np3_A Ketol-acid reductoisome 41.2 12 0.00042 36.5 2.4 33 323-367 16-48 (338)
478 3d0o_A L-LDH 1, L-lactate dehy 41.1 34 0.0012 33.1 5.6 96 324-437 7-117 (317)
479 2hcy_A Alcohol dehydrogenase 1 41.0 29 0.001 33.2 5.1 44 307-366 158-202 (347)
480 3uog_A Alcohol dehydrogenase; 41.0 25 0.00086 34.1 4.7 31 324-366 191-221 (363)
481 3l6d_A Putative oxidoreductase 41.0 16 0.00056 34.8 3.2 32 324-367 10-41 (306)
482 2wdq_A Succinate dehydrogenase 41.0 16 0.00053 38.5 3.4 35 324-370 8-42 (588)
483 2yjz_A Metalloreductase steap4 46.9 5.8 0.0002 36.0 0.0 22 324-345 20-41 (201)
484 3tl2_A Malate dehydrogenase; c 40.7 18 0.00063 35.3 3.6 96 324-437 9-121 (315)
485 3ces_A MNMG, tRNA uridine 5-ca 40.6 15 0.00052 39.8 3.2 32 324-367 29-60 (651)
486 2q1w_A Putative nucleotide sug 40.6 23 0.00077 33.4 4.1 80 321-419 19-100 (333)
487 4h3v_A Oxidoreductase domain p 40.5 21 0.00071 34.2 3.9 99 321-438 4-108 (390)
488 3euw_A MYO-inositol dehydrogen 40.4 30 0.001 33.1 5.1 89 324-438 5-98 (344)
489 3oqb_A Oxidoreductase; structu 40.2 19 0.00064 35.2 3.6 40 397-438 72-116 (383)
490 4dll_A 2-hydroxy-3-oxopropiona 40.0 16 0.00055 35.1 3.0 32 324-367 32-63 (320)
491 1kdg_A CDH, cellobiose dehydro 40.0 15 0.00052 37.7 3.0 33 324-368 8-40 (546)
492 3pdu_A 3-hydroxyisobutyrate de 40.0 16 0.00056 34.2 3.0 32 324-367 2-33 (287)
493 1ur5_A Malate dehydrogenase; o 40.0 18 0.00061 35.0 3.3 33 324-367 3-35 (309)
494 2z2v_A Hypothetical protein PH 39.9 15 0.00052 36.5 2.9 80 324-429 17-96 (365)
495 3cky_A 2-hydroxymethyl glutara 39.8 16 0.00054 34.2 2.9 32 324-367 5-36 (301)
496 1evy_A Glycerol-3-phosphate de 39.7 10 0.00035 36.8 1.6 31 325-367 17-47 (366)
497 2axq_A Saccharopine dehydrogen 39.5 12 0.00041 38.7 2.1 39 315-367 18-56 (467)
498 2gf2_A Hibadh, 3-hydroxyisobut 39.4 14 0.00048 34.4 2.4 31 325-367 2-32 (296)
499 1vpd_A Tartronate semialdehyde 39.3 15 0.00052 34.2 2.7 32 324-367 6-37 (299)
500 3e9m_A Oxidoreductase, GFO/IDH 39.2 26 0.00089 33.6 4.4 90 324-438 6-100 (330)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=7.2e-154 Score=1207.88 Aligned_cols=389 Identities=44% Similarity=0.835 Sum_probs=382.9
Q ss_pred CccccccCCCCCcCCCCChHHhhhcCCCCCCCCccccHHHHHHHHHHHHhchhcccCCCCCCcCchhHHHHHHHhhcccc
Q 013638 31 RGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNE 110 (439)
Q Consensus 31 ~G~~~l~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~t~e~Q~~R~~~~~~~~~~~~~~~~~~~~~l~k~~~L~~L~~~Ne 110 (439)
+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||++||++||
T Consensus 2 ~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~Ne 71 (555)
T 1gq2_A 2 KGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLT----------SDLDRYILLMSLQDRNE 71 (555)
T ss_dssp CTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCC----------CHHHHHHHHHHHHHHCH
T ss_pred ChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhcCcce
Confidence 69999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred hhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 013638 111 TLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLG 190 (439)
Q Consensus 111 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 190 (439)
+||||++.+|++|+|||+||||||++|++||++||+|+|||||++|+|+++++++|||.++|++||||||||||||||||
T Consensus 72 ~Lfy~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G 151 (555)
T 1gq2_A 72 KLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLG 151 (555)
T ss_dssp HHHHHHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCG
T ss_pred eeehhhHhhhHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhC-CceEEE
Q 013638 191 VQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAIVQ 269 (439)
Q Consensus 191 ~~Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~~-P~~~Iq 269 (439)
++||+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.+| |+++||
T Consensus 152 ~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~ 231 (555)
T 1gq2_A 152 CYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQ 231 (555)
T ss_dssp GGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCccccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred EecCCCchHHHHHHHHhhcccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHH
Q 013638 270 FEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (439)
Q Consensus 270 fEDf~~~naf~iL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~ 349 (439)
||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+||+++|+ +
T Consensus 232 ~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAg~gia~ll~~~~~-~ 307 (555)
T 1gq2_A 232 FEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSD---HTVLFQGAGEAALGIANLIVMAMQ-K 307 (555)
T ss_dssp ECSCCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGG---CCEEEECCSHHHHHHHHHHHHHHH-H
T ss_pred ecccCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999 6
Q ss_pred cCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHH
Q 013638 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTY 429 (439)
Q Consensus 350 ~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~ 429 (439)
+|+|+|||+++|||||++|||+++|++|+++|++||+++++ .++|+|||+++|||||||+|++||+||||||++
T Consensus 308 ~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~ 381 (555)
T 1gq2_A 308 EGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCE------MKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQD 381 (555)
T ss_dssp HTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCC------CCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHH
T ss_pred cCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 89999999999999999999999998999999999998642 468999999999999999999999999999999
Q ss_pred HhccCCCCCC
Q 013638 430 FLCFIPCFIF 439 (439)
Q Consensus 430 Ma~~~~~pi~ 439 (439)
||++|++|||
T Consensus 382 Ma~~~~~PII 391 (555)
T 1gq2_A 382 MAAFNKRPII 391 (555)
T ss_dssp HHHHCSSCEE
T ss_pred HHhcCCCCEE
Confidence 9999999997
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=2e-153 Score=1207.57 Aligned_cols=393 Identities=41% Similarity=0.780 Sum_probs=384.9
Q ss_pred ccCccccccCCCCCcCCCCChHHhhhcCCCCCCCCccccHHHHHHHHHHHHhchhcccCCCCCCcCchhHHHHHHHhhcc
Q 013638 29 HKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDR 108 (439)
Q Consensus 29 ~~~G~~~l~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~t~e~Q~~R~~~~~~~~~~~~~~~~~~~~~l~k~~~L~~L~~~ 108 (439)
..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||++||++
T Consensus 2 ~~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~ 71 (564)
T 1pj3_A 2 KEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT----------SPLEKYIYIMGIQER 71 (564)
T ss_dssp CCCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCC----------SHHHHHHHHHHHHTT
T ss_pred CCchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhhcc
Confidence 3689999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred cchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeeccCC
Q 013638 109 NETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGD 188 (439)
Q Consensus 109 Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGD 188 (439)
||+||||++.+|++|+|||+||||||++|++||++||+|+|+|||++|+++++++++|||.++|+|||||||||||||||
T Consensus 72 Ne~Lfy~ll~~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD 151 (564)
T 1pj3_A 72 NEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGD 151 (564)
T ss_dssp CHHHHHHHHHHCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCC
T ss_pred cceeehhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhC-CceE
Q 013638 189 LGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAI 267 (439)
Q Consensus 189 lG~~Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~~-P~~~ 267 (439)
||++||+|||||++|||+||||||++|||||||+||||++||+||+||||||+|++|++||+|+||||++|+++| |+++
T Consensus 152 ~G~~gm~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~ 231 (564)
T 1pj3_A 152 LGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTL 231 (564)
T ss_dssp CGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCCcccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 8999
Q ss_pred EEEecCCCchHHHHHHHHhhcccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHH
Q 013638 268 VQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (439)
Q Consensus 268 IqfEDf~~~naf~iL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~ 347 (439)
||||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+||+++|+
T Consensus 232 I~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia~ll~~~m~ 308 (564)
T 1pj3_A 232 IQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISE---HKILFLGAGEAALGIANLIVMSMV 308 (564)
T ss_dssp EEECSCCHHHHHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHHHHHHHHHH
T ss_pred EeehhcCCccHHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhH---cEEEEeCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHcCCChhhhcCeEEEEecccccccCC-CCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHH
Q 013638 348 RMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEV 426 (439)
Q Consensus 348 ~~~Gls~eeA~~~i~lvDs~GLl~~~r-~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~Fteev 426 (439)
++|+|+|||+++|||||++|||+++| ++|+++|++||++++++ ..++|+|||+++|||||||+|++||+|||||
T Consensus 309 -~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~----~~~~L~eav~~vkp~vlIG~S~~~g~ft~ev 383 (564)
T 1pj3_A 309 -ENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPES----IPDTFEDAVNILKPSTIIGVAGAGRLFTPDV 383 (564)
T ss_dssp -HTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSS----CCSSHHHHHHHHCCSEEEECCCSSCCSCHHH
T ss_pred -HcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCcc----ccCCHHHHHhhcCCCEEEEeCCCCCCCCHHH
Confidence 68999999999999999999999999 78999999999987642 1368999999999999999999999999999
Q ss_pred HHHHhccCCCCCC
Q 013638 427 KTYFLCFIPCFIF 439 (439)
Q Consensus 427 V~~Ma~~~~~pi~ 439 (439)
|++||++|++|||
T Consensus 384 v~~Ma~~~~~PII 396 (564)
T 1pj3_A 384 IRAMASINERPVI 396 (564)
T ss_dssp HHHHHHHCSSCEE
T ss_pred HHHHHhcCCCCEE
Confidence 9999999999997
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=3.7e-153 Score=1208.98 Aligned_cols=396 Identities=45% Similarity=0.797 Sum_probs=387.5
Q ss_pred CceeeccCccccccCCCCCcCCCCChHHhhhcCCCCCCCCccccHHHHHHHHHHHHhchhcccCCCCCCcCchhHHHHHH
Q 013638 24 GPCMVHKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILN 103 (439)
Q Consensus 24 ~~~~~~~~G~~~l~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~t~e~Q~~R~~~~~~~~~~~~~~~~~~~~~l~k~~~L~ 103 (439)
.++.+..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||+
T Consensus 31 ~~~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~ 100 (605)
T 1o0s_A 31 ERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQP----------NDLARYIQLD 100 (605)
T ss_dssp CCCCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSS----------SHHHHHHHHH
T ss_pred CccccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCC----------CcHHHHHHHH
Confidence 345567899999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred HhhcccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCCh--hhHHHHHhcCCCCCeeEEEEecCc
Q 013638 104 RLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDK--GEMMSMIYNWPAQQVDMIVLTDGS 181 (439)
Q Consensus 104 ~L~~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyls~~d~--g~i~~~l~nwp~~~v~viVVTDG~ 181 (439)
+||++||+||||++.+|++|+|||+||||||++|++||++||+|+|+|||++|+ |+++++++|||.++|+||||||||
T Consensus 101 ~L~~~Ne~Lfyrll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~ 180 (605)
T 1o0s_A 101 GLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGE 180 (605)
T ss_dssp HHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSS
T ss_pred HhhcccchhhhhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccc
Confidence 999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred eeeccCCCCCCcccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHH
Q 013638 182 RILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHA 261 (439)
Q Consensus 182 rILGLGDlG~~Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~ 261 (439)
|||||||||++||+|||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.
T Consensus 181 ~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~ 260 (605)
T 1o0s_A 181 RILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTK 260 (605)
T ss_dssp CBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHH
T ss_pred cceecCCCCCCcCcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hC-CceEEEEecCCCchHHHHHHHHhhcccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHH
Q 013638 262 RW-PKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLK 340 (439)
Q Consensus 262 ~~-P~~~IqfEDf~~~naf~iL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~ 340 (439)
+| |+++||||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+
T Consensus 261 ~fGp~~~I~~EDf~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia~ 337 (605)
T 1o0s_A 261 KYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQ---EKYLFFGAGAASTGIAE 337 (605)
T ss_dssp HHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHHH
T ss_pred HhCCCcEeeHhhcCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHH
Confidence 99 999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCC
Q 013638 341 MAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGG 420 (439)
Q Consensus 341 li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G 420 (439)
||+++|+ ++|+|+|||+++|||||++|||+++|++|+++|++||+++++ .++|+|||+++|||||||+|++||
T Consensus 338 ll~~~m~-~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkpdVlIG~S~~~g 410 (605)
T 1o0s_A 338 MIVHQMQ-NEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPE------TTSILEVIRAARPGALIGASTVRG 410 (605)
T ss_dssp HHHHHHH-TTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSSCC------CCCHHHHHHHHCCSEEEECSSCTT
T ss_pred HHHHHHH-HcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCCC
Confidence 9999999 789999999999999999999999998999999999998642 468999999999999999999999
Q ss_pred CCCHHHHHHHhccCCCCCC
Q 013638 421 VFNEEVKTYFLCFIPCFIF 439 (439)
Q Consensus 421 ~FteevV~~Ma~~~~~pi~ 439 (439)
+||||||++||++|++|||
T Consensus 411 ~ft~evv~~Ma~~~~~PII 429 (605)
T 1o0s_A 411 AFNEEVIRAMAEINERPII 429 (605)
T ss_dssp CSCHHHHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHhcCCCCEE
Confidence 9999999999999999997
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=7.4e-86 Score=682.33 Aligned_cols=278 Identities=23% Similarity=0.323 Sum_probs=251.0
Q ss_pred chhHHHHHHHhhcccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeE
Q 013638 95 SLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDM 174 (439)
Q Consensus 95 ~l~k~~~L~~L~~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyls~~d~g~i~~~l~nwp~~~v~v 174 (439)
.|+-|.+ -..+-++. .++.+++.++ ||++||||||++|++|+ +|++++++++.+| ++|
T Consensus 36 al~~h~~---~~GKi~v~-~~~~~~~~~d-LslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~V 93 (487)
T 3nv9_A 36 AEKVHKF---YKGKIQIM-PKCTLAGFNW-FNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFV 93 (487)
T ss_dssp HHHHHHH---HTSSEEEE-ECSCCSSGGG-HHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEE
T ss_pred HHHHhhh---CCCeEEEE-ecCCCCCHHH-CeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEE
Confidence 3554433 26777775 8889999988 79999999999999998 6899999999877 689
Q ss_pred EEEecCceeeccCCCCC-CcccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHH
Q 013638 175 IVLTDGSRILGLGDLGV-QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVD 253 (439)
Q Consensus 175 iVVTDG~rILGLGDlG~-~Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vd 253 (439)
||||||||||||||+|+ +||||||||++|||+||||| |||||||+||+| +++| +|
T Consensus 94 aVVTDG~aILGLGDiG~~agmpImeGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d-------------------~d 149 (487)
T 3nv9_A 94 GVVSDSTRVLGDGDVTPPGGLGVMEGKALLMKYLGGID---AVPICIDSKNKE--GKND-------------------PD 149 (487)
T ss_dssp EEEECSSSBGGGBCCCGGGGHHHHHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBC-------------------HH
T ss_pred EEEEcCceeeeccccccccCCchhhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCC-------------------HH
Confidence 99999999999999999 79999999999999999999 999999999766 4677 59
Q ss_pred HHHHHHHHhCCce-EEEEecCCCchHHHHHHHHhh--cccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeC
Q 013638 254 EFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRK--RFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVG 330 (439)
Q Consensus 254 efv~av~~~~P~~-~IqfEDf~~~naf~iL~ryr~--~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~G 330 (439)
|||++|+++||++ +||||||++||||+||+|||+ .||||||||||||+|+||||+||+|++|++|+| |||||+|
T Consensus 150 efve~v~~~~P~fG~InlEDf~ap~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d---~riV~~G 226 (487)
T 3nv9_A 150 AVIEFVQRIQHTFGAINLEDISQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHE---CRMVFIG 226 (487)
T ss_dssp HHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGG---CCEEEEC
T ss_pred HHHHHHHHhCCCCCeecHhhcCCchHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhh---cEEEEEC
Confidence 9999999999998 999999999999999999999 489999999999999999999999999999999 9999999
Q ss_pred chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCC-----hhhhccccccCCcCCCCCCCCHHHHhc
Q 013638 331 AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD-----PAAAPFAKDPGDFMGLREGASLLEVVR 405 (439)
Q Consensus 331 AGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~-----~~k~~fA~~~~~~~~~~~~~sL~eaV~ 405 (439)
||+||+|||+||+. .|+|+ ++|||||++|||+++|++|+ ++|.+||+.+++ ...+||+|||+
T Consensus 227 AGaAGigia~ll~~-----~G~~~----~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~----~~~~~L~eav~ 293 (487)
T 3nv9_A 227 AGSSNTTCLRLIVT-----AGADP----KKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNP----SKFGSIAEACV 293 (487)
T ss_dssp CSHHHHHHHHHHHH-----TTCCG----GGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCT----TCCCSHHHHHT
T ss_pred CCHHHHHHHHHHHH-----cCCCc----ccEEEEeccccccCCcchhhhhcccHHHHHHHHhccc----ccCCCHHHHHh
Confidence 99999999999974 59986 89999999999999997774 466788887542 24579999999
Q ss_pred cCCCcEEEeccCC-CCCCCHHHHHHHhccCCCCCC
Q 013638 406 KVKPHVLLGLSGV-GGVFNEEVKTYFLCFIPCFIF 439 (439)
Q Consensus 406 ~vkPtvLIG~S~~-~G~FteevV~~Ma~~~~~pi~ 439 (439)
+ +|||||+|++ ||+||||||++|+ ++|||
T Consensus 294 ~--adVlIG~S~~~pg~ft~e~V~~Ma---~~PII 323 (487)
T 3nv9_A 294 G--ADVLISLSTPGPGVVKAEWIKSMG---EKPIV 323 (487)
T ss_dssp T--CSEEEECCCSSCCCCCHHHHHTSC---SSCEE
T ss_pred c--CCEEEEecccCCCCCCHHHHHhhc---CCCEE
Confidence 9 7999999976 8999999999997 68986
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=8.7e-79 Score=622.02 Aligned_cols=262 Identities=29% Similarity=0.449 Sum_probs=239.5
Q ss_pred hcccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeec
Q 013638 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (439)
Q Consensus 106 ~~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (439)
..+-+. ++++.+++.++ |||+||||||++|++|+ +||++++ +|+.++++|+||||||||||
T Consensus 19 ~gk~~~-~~~~~~~~~~~-l~i~YtP~V~~~c~~i~-------------~~p~~v~----~~t~~~~~V~VvTdG~~iLG 79 (398)
T 2a9f_A 19 GGKLEV-QPKVDIKTKHD-LSIAYTPGVASVSSAIA-------------KDKTLAY----DLTTKKNTVAVISDGTAVLG 79 (398)
T ss_dssp TSSEEE-EESSCCSSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHH----HHSGGGTEEEEEECSSSCTT
T ss_pred CCeEEE-EEecccCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----HhcccCCEEEEEECCccccC
Confidence 677665 69999999865 79999999999999998 4888776 56767899999999999999
Q ss_pred cCCCCCC-cccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCC
Q 013638 186 LGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (439)
Q Consensus 186 LGDlG~~-Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~~P 264 (439)
|||+|++ |||||+||+.|||+||||| |+|||||+|| +||||++|+++||
T Consensus 80 LGD~G~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~p 129 (398)
T 2a9f_A 80 LGDIGPEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALAP 129 (398)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHGG
T ss_pred CCCcccccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcCC
Confidence 9999996 9999999999999999999 9999999985 8999999999999
Q ss_pred ce-EEEEecCCCchHHHHHHHHhhc--ccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHH
Q 013638 265 KA-IVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (439)
Q Consensus 265 ~~-~IqfEDf~~~naf~iL~ryr~~--~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~l 341 (439)
++ +||||||+++|||++|+|||++ +|||||||||||+|+|||++||+|++|++++| +||||+|||+||+|||++
T Consensus 130 ~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d---~kVVi~GAGaAG~~iA~l 206 (398)
T 2a9f_A 130 TFGGINLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDE---VSIVVNGGGSAGLSITRK 206 (398)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTS---CEEEEECCSHHHHHHHHH
T ss_pred ceeEeccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCc---cEEEEECCCHHHHHHHHH
Confidence 94 9999999999999999999998 99999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHcCCChhhhcCeEEEEecccccccCC-CCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCC
Q 013638 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGG 420 (439)
Q Consensus 342 i~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r-~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G 420 (439)
++.+ |. ++||++|++|||+++| ++|+++|++||++++.. ....+|+|+|++ +|+|||+|+ ||
T Consensus 207 l~~~-----Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~---~~~~~L~eav~~--ADV~IG~Sa-pg 269 (398)
T 2a9f_A 207 LLAA-----GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNRE---FKSGTLEDALEG--ADIFIGVSA-PG 269 (398)
T ss_dssp HHHH-----TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCT---TCCCSCSHHHHT--TCSEEECCS-TT
T ss_pred HHHc-----CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcc---cchhhHHHHhcc--CCEEEecCC-CC
Confidence 9875 54 7999999999999999 88999999999986542 235789999999 899999998 99
Q ss_pred CCCHHHHHHHhccCCCCCC
Q 013638 421 VFNEEVKTYFLCFIPCFIF 439 (439)
Q Consensus 421 ~FteevV~~Ma~~~~~pi~ 439 (439)
+||||+|++|+ ++|||
T Consensus 270 l~T~EmVk~Ma---~~pII 285 (398)
T 2a9f_A 270 VLKAEWISKMA---ARPVI 285 (398)
T ss_dssp CCCHHHHHTSC---SSCEE
T ss_pred CCCHHHHHhhC---CCCEE
Confidence 99999999999 67775
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=4.9e-75 Score=593.33 Aligned_cols=264 Identities=23% Similarity=0.364 Sum_probs=241.5
Q ss_pred HhhcccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCcee
Q 013638 104 RLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRI 183 (439)
Q Consensus 104 ~L~~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rI 183 (439)
....+-+. ++++.+++.++ |||+||||||++|++|+ .||++++ +|+.++++|+||||||||
T Consensus 21 ~~~gk~~~-~~~~~~~~~~~-l~i~YtP~V~~~c~~~~-------------~~p~~v~----~~t~~~~~V~VvTdg~~v 81 (388)
T 1vl6_A 21 FLKGKIRT-ALPVEKVDRET-LSLLYTPGVADVARACA-------------EDPEKTY----VYTSRWNTVAVVSDGSAV 81 (388)
T ss_dssp HHTCSCEE-ECSCSCCCHHH-HHHHSTTTHHHHHHHHH-------------HCGGGHH----HHSGGGGEEEEEECSTTB
T ss_pred cCCCeEEE-EEeeecCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----hhcccCCeEEEEECCccc
Confidence 34667665 69999999977 79999999999999998 3777766 567788999999999999
Q ss_pred eccCCCCCC-cccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHh
Q 013638 184 LGLGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHAR 262 (439)
Q Consensus 184 LGLGDlG~~-Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~ 262 (439)
|||||+|++ |||||+||++||++||||| |+|||||+|| +||||++|+++
T Consensus 82 LGlGD~G~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~ 131 (388)
T 1vl6_A 82 LGLGNIGPYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSL 131 (388)
T ss_dssp TTTBSCCHHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHT
T ss_pred cCCCccccccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHc
Confidence 999999995 9999999999999999999 9999999985 89999999999
Q ss_pred CCce-EEEEecCCCchHHHHHHHHhhc--ccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHH
Q 013638 263 WPKA-IVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVL 339 (439)
Q Consensus 263 ~P~~-~IqfEDf~~~naf~iL~ryr~~--~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA 339 (439)
||++ .||||||+++|||++|+|||++ ||||||||||||+|++||++||+|++|+++++ +||||+|||+||+++|
T Consensus 132 ~p~f~~i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~---~kVVv~GAGaAG~~iA 208 (388)
T 1vl6_A 132 EPSFGGINLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEE---VKVVVNGIGAAGYNIV 208 (388)
T ss_dssp GGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CEEEEECCSHHHHHHH
T ss_pred CCcceEeCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCC---cEEEEECCCHHHHHHH
Confidence 9994 9999999999999999999997 99999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCC--CChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccC
Q 013638 340 KMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN--LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (439)
Q Consensus 340 ~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~--L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~ 417 (439)
++++.+ |. ++||++|++|||+.+|.+ |+++|++||++.+.+ ....+|+|+|+. +|+|||+|+
T Consensus 209 kll~~~-----G~------~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~eav~~--ADVlIG~Sa 272 (388)
T 1vl6_A 209 KFLLDL-----GV------KNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLETALEG--ADFFIGVSR 272 (388)
T ss_dssp HHHHHH-----TC------CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHHHHHTT--CSEEEECSC
T ss_pred HHHHhC-----CC------CeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHHHHHcc--CCEEEEeCC
Confidence 999875 42 799999999999999976 999999999986532 235789999999 999999999
Q ss_pred CCCCCCHHHHHHHhccCCCCCC
Q 013638 418 VGGVFNEEVKTYFLCFIPCFIF 439 (439)
Q Consensus 418 ~~G~FteevV~~Ma~~~~~pi~ 439 (439)
||+||+|+|++|+ ++|||
T Consensus 273 -p~l~t~emVk~Ma---~~pII 290 (388)
T 1vl6_A 273 -GNILKPEWIKKMS---RKPVI 290 (388)
T ss_dssp -SSCSCHHHHTTSC---SSCEE
T ss_pred -CCccCHHHHHhcC---CCCEE
Confidence 8999999999998 46764
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=1.8e-55 Score=455.96 Aligned_cols=262 Identities=27% Similarity=0.474 Sum_probs=232.4
Q ss_pred cccchhhheeeccCcccccceecccchHHHHHHHhhhccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCceeecc
Q 013638 107 DRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGL 186 (439)
Q Consensus 107 ~~Ne~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyls~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGL 186 (439)
.+-++ ++++.+++.++ |||+||||||++|++|+ +|++++++ |+.++|+++|||||+|||||
T Consensus 18 gk~~~-~~~~~~~~~~~-l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGl 78 (439)
T 2dvm_A 18 GKIEV-IPKVSLESREE-LTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGL 78 (439)
T ss_dssp SSEEE-EESSCCCSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTT
T ss_pred CEEEE-EEeeccCCHHH-CeeEECchhHHHHHHHH-------------HCHHHHHh----hcccCcEEEEEECCCeEecc
Confidence 44454 59999999975 79999999999999999 59998887 66677999999999999999
Q ss_pred CCCCCC-cccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCc
Q 013638 187 GDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPK 265 (439)
Q Consensus 187 GDlG~~-Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~~P~ 265 (439)
||+|.+ ++|+|+||++||++||||| ++|++||+ +| +|||+++|+.++|+
T Consensus 79 G~iG~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv--------~d-------------------~de~~~~v~~l~~~ 128 (439)
T 2dvm_A 79 GNIGPLAGLPVMEGKALLFKRFGGVD---AFPIMIKE--------QE-------------------PNKFIDIVKAIAPT 128 (439)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHHCCE---EEEEECSC--------CS-------------------HHHHHHHHHHTGGG
T ss_pred cceeccccCHHHHHHHHHHHHhCCCC---Ceeeeeec--------CC-------------------HHHHHHHHHHhCcc
Confidence 999995 9999999999999999999 99999999 23 79999999999999
Q ss_pred e-EEEEecCCCchHHHHHHHHhhc--ccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHH
Q 013638 266 A-IVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMA 342 (439)
Q Consensus 266 ~-~IqfEDf~~~naf~iL~ryr~~--~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li 342 (439)
+ +||||||+.|+||++|++|++. +||||||+||||++.++|+++|++..|+++++ +|+||+|||+||.+||.+|
T Consensus 129 f~GinvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~---~rvlvlGAGgAg~aia~~L 205 (439)
T 2dvm_A 129 FGGINLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISE---ITLALFGAGAAGFATLRIL 205 (439)
T ss_dssp CSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CCEEEECCSHHHHHHHHHH
T ss_pred CcEEEEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccC---CEEEEECccHHHHHHHHHH
Confidence 5 9999999999999999999985 89999999999999999999999999999999 9999999999999999998
Q ss_pred HHHHHHHcCCChhhhcCeEEEEe----cccccccCCCC---CChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEec
Q 013638 343 VQAAARMAGNNDAFARNKFFLLD----KDGLITKERKN---LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL 415 (439)
Q Consensus 343 ~~~~~~~~Gls~eeA~~~i~lvD----s~GLl~~~r~~---L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~ 415 (439)
.+ .|+++ ++||++| ++||++++ ++ |.+++++|++..+.. ....+|.|+++. +|++||+
T Consensus 206 ~~-----~G~~~----~~I~vvd~~~~R~G~~~~a-~~~~~L~~~~~~~a~~~~~~---~~~~~L~e~l~~--aDVlIna 270 (439)
T 2dvm_A 206 TE-----AGVKP----ENVRVVELVNGKPRILTSD-LDLEKLFPYRGWLLKKTNGE---NIEGGPQEALKD--ADVLISF 270 (439)
T ss_dssp HH-----TTCCG----GGEEEEEEETTEEEECCTT-SCHHHHSTTCHHHHTTSCTT---CCCSSHHHHHTT--CSEEEEC
T ss_pred HH-----cCCCc----CeEEEEEccCCCcCccccc-cchhHHHHHHHHHhhccccc---cccccHHHHhcc--CCEEEEc
Confidence 76 47763 6899999 99999887 45 788888888754321 124579999998 9999999
Q ss_pred cCCC-CCCCHHHHHHHhccCCCCC
Q 013638 416 SGVG-GVFNEEVKTYFLCFIPCFI 438 (439)
Q Consensus 416 S~~~-G~FteevV~~Ma~~~~~pi 438 (439)
|+.+ |+|++++++.|+ ++||
T Consensus 271 T~~~~G~~~~e~v~~m~---~~~i 291 (439)
T 2dvm_A 271 TRPGPGVIKPQWIEKMN---EDAI 291 (439)
T ss_dssp SCCCSSSSCHHHHTTSC---TTCE
T ss_pred CCCccCCCChHHHHhcC---CCCE
Confidence 9975 999999999887 4454
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.44 E-value=4.9e-07 Score=93.88 Aligned_cols=150 Identities=19% Similarity=0.213 Sum_probs=108.1
Q ss_pred CChhhhhHhHHHHHHHHHHhCCceEEEEecCCCchHHHHH---------------------HHHhh-------ccccc--
Q 013638 243 LEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETL---------------------ERYRK-------RFCMF-- 292 (439)
Q Consensus 243 ~~g~~y~~~vdefv~av~~~~P~~~IqfEDf~~~naf~iL---------------------~ryr~-------~~~~F-- 292 (439)
-+.+||+..++..+.+ ...-|+.+| |-+..=...+- .||+. .+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~-~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~v 187 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV-EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNV 187 (435)
T ss_dssp CCHHHHHHHHHHHHCB-TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEEC
T ss_pred CCHHHHHHHHHHHHhc-cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEEe
Confidence 3667888877776642 112367666 65654444332 34443 28999
Q ss_pred --------ccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEE
Q 013638 293 --------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLL 364 (439)
Q Consensus 293 --------NDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lv 364 (439)
.|++.||+-++++|+.++ ++..+.. .+++|+|+|..|.++|+.+... |. +++.+
T Consensus 188 nds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~G---ktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~ 249 (435)
T 3gvp_A 188 NDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGG---KQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVT 249 (435)
T ss_dssp TTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHh---hCceecC---CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEE
Confidence 899999999999999865 6888888 9999999999999999887654 43 68888
Q ss_pred ecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 365 DKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 365 Ds~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
|++.. +...|.... ....+|.|+++. .|++|.+++..++++++.++.|.+
T Consensus 250 D~dp~-----------ra~~A~~~G-----~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK~ 299 (435)
T 3gvp_A 250 EIDPI-----------CALQACMDG-----FRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMKN 299 (435)
T ss_dssp CSCHH-----------HHHHHHHTT-----CEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSCT
T ss_pred eCChh-----------hhHHHHHcC-----CEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcCC
Confidence 87431 112222110 012479999998 999999988889999999999975
No 9
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.38 E-value=2.5e-07 Score=94.42 Aligned_cols=216 Identities=16% Similarity=0.244 Sum_probs=126.7
Q ss_pred CChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCC--CcccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccC
Q 013638 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLED 232 (439)
Q Consensus 155 ~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~--~Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~D 232 (439)
-+|+.++++... ..+|+|.++++..+|++|.+. .|..|+.+ ..+|. | +++|.+. +
T Consensus 25 ltP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk--------~ 81 (401)
T 1x13_A 25 ATPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVN--------A 81 (401)
T ss_dssp CCHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSS--------C
T ss_pred CCHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeC--------C
Confidence 467778888773 468999999999999999997 49999998 67775 1 5677653 2
Q ss_pred cccccccccCCChhhhhHhHHHHHHHHHHhCCce-EEEEecCCCchHHHHHHHHhhc-ccccc-cCc------c----hh
Q 013638 233 RLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR-FCMFN-DDI------Q----GT 299 (439)
Q Consensus 233 p~YlG~r~~R~~g~~y~~~vdefv~av~~~~P~~-~IqfEDf~~~naf~iL~ryr~~-~~~FN-DDi------Q----GT 299 (439)
| .++.++. .-|+. +|.+=..+.. -..++.++++ +.+|+ +.+ | .+
T Consensus 82 p------------------~~~~i~~---l~~~~~li~~~~~~~d--~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 82 P------------------LDDEIAL---LNPGTTLVSFIWPAQN--PELMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp C------------------CHHHHTT---CCTTCEEEECCCGGGC--HHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred C------------------CHHHHHH---hcCCCcEEEEecCCCC--HHHHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 2 1233322 22543 5544443322 2355566554 77773 222 2 45
Q ss_pred HHHHHHHHHHHHHHhCCCc-----------cCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 300 AGVALAGLLGTVRAQGLSL-----------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 300 aaV~LAgll~A~r~~g~~l-----------~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
....+|| .+|++..+..+ .++...+|+|+|+|.+|.++|+.+... |. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCH
Confidence 5556665 44444432211 123448999999999999999877543 42 689999865
Q ss_pred ccccCCCCCCh------------hhhccccccCC-cCCCCCCCCHHHHhccCCCcEEEeccCC-----CCCCCHHHHHHH
Q 013638 369 LITKERKNLDP------------AAAPFAKDPGD-FMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVKTYF 430 (439)
Q Consensus 369 Ll~~~r~~L~~------------~k~~fA~~~~~-~~~~~~~~sL~eaV~~vkPtvLIG~S~~-----~G~FteevV~~M 430 (439)
-.......+.. .+..|++...+ +. .....+|.++++. .|++|++... +.+++++.++.|
T Consensus 206 ~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFI-KAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHHHHTTCEECCC--------CCHHHHHHSHHHH-HHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHHHHcCCEEEEecccccccccccchhhccHHHH-HHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 32110000100 00001110000 00 0000147888887 9999998544 367999999999
Q ss_pred hc
Q 013638 431 LC 432 (439)
Q Consensus 431 a~ 432 (439)
.+
T Consensus 283 k~ 284 (401)
T 1x13_A 283 KA 284 (401)
T ss_dssp CT
T ss_pred CC
Confidence 74
No 10
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.22 E-value=8.3e-07 Score=92.24 Aligned_cols=108 Identities=18% Similarity=0.223 Sum_probs=84.3
Q ss_pred cccc----------ccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhc
Q 013638 289 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 358 (439)
Q Consensus 289 ~~~F----------NDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~ 358 (439)
+|+| .|++.||+.+++++++. .++..+.. .+|+|+|.|..|.++|+.+..+ |.
T Consensus 173 iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~G---ktVgIiG~G~IG~~vA~~Lka~-----Ga------ 235 (436)
T 3h9u_A 173 IPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAG---KTACVCGYGDVGKGCAAALRGF-----GA------ 235 (436)
T ss_dssp SCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccC---CEEEEEeeCHHHHHHHHHHHHC-----CC------
Confidence 8999 89999999999999965 46888888 9999999999999999988664 43
Q ss_pred CeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 359 NKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 359 ~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
+++.+|++. .+...|.... ....+|.|+++. +|++|.+++..++++++.++.|.+
T Consensus 236 -~Viv~D~~p-----------~~a~~A~~~G-----~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK~ 290 (436)
T 3h9u_A 236 -RVVVTEVDP-----------INALQAAMEG-----YQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMRD 290 (436)
T ss_dssp -EEEEECSCH-----------HHHHHHHHTT-----CEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCCT
T ss_pred -EEEEECCCh-----------hhhHHHHHhC-----CeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcCC
Confidence 688888732 2222222111 012479999998 999998887779999999988865
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.53 E-value=0.0001 Score=77.63 Aligned_cols=108 Identities=22% Similarity=0.293 Sum_probs=75.1
Q ss_pred cccc----------ccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhc
Q 013638 289 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 358 (439)
Q Consensus 289 ~~~F----------NDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~ 358 (439)
+|+| .|++.||+..++.++. |.++..|.. .+++|.|+|..|.++|+.+... |.
T Consensus 227 iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~G---KtVvVtGaGgIG~aiA~~Laa~-----GA------ 289 (488)
T 3ond_A 227 FPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAG---KVAVVAGYGDVGKGCAAALKQA-----GA------ 289 (488)
T ss_dssp SCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccC---CEEEEECCCHHHHHHHHHHHHC-----CC------
Confidence 8999 6899999999999887 678888877 9999999998888888776553 43
Q ss_pred CeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 359 NKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 359 ~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
+++++|++.. +...+.... ....++.++++. .|+++-.++..++++.+.++.|..
T Consensus 290 -~Viv~D~~~~-----------~a~~Aa~~g-----~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk~ 344 (488)
T 3ond_A 290 -RVIVTEIDPI-----------CALQATMEG-----LQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMKN 344 (488)
T ss_dssp -EEEEECSCHH-----------HHHHHHHTT-----CEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSCT
T ss_pred -EEEEEcCCHH-----------HHHHHHHhC-----CccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcCC
Confidence 7888887431 111111000 011345666665 777777776667777777776643
No 12
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.40 E-value=0.0013 Score=66.17 Aligned_cols=228 Identities=15% Similarity=0.163 Sum_probs=115.3
Q ss_pred CChhhHHHHHhcCCCCCeeEEEEecCceeeccCCCCC--CcccccchhhhHHHhhcCCCCCceecEEeeccCC-----ch
Q 013638 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTN-----NQ 227 (439)
Q Consensus 155 ~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~--~Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTn-----n~ 227 (439)
-+|..++++.. .+.+|+|.++++...|+.|... .|..|+.++..++ ++. .++|.+.+- ++
T Consensus 18 l~P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~a------diil~v~~p~~~~~~~ 84 (384)
T 1l7d_A 18 ISPEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQA------DVVWKVQRPMTAEEGT 84 (384)
T ss_dssp CCHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSC------SEEEEEECCCCGGGSC
T ss_pred CCHHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCC------CEEEEecCcccccCCH
Confidence 46777777777 3578999999999999999886 5899988877666 333 356665321 11
Q ss_pred hcc----cCcccccccccCCChhhhhHhHHHHHHHHHHhCCceEEEEecCCCchHHHHHHHHhhcccccccCcchhHHHH
Q 013638 228 KLL----EDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVA 303 (439)
Q Consensus 228 ~Ll----~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~~P~~~IqfEDf~~~naf~iL~ryr~~~~~FNDDiQGTaaV~ 303 (439)
+.+ ..-.+++.-+.- ++ .+.+++++++-.. ++.+|-.....+ ...+++|+ ....
T Consensus 85 ~~i~~l~~~~~~i~~~~~~-----~~---~~~~~~~~~~gi~-~~~~e~~~~~~~-------~~~l~~l~------~~a~ 142 (384)
T 1l7d_A 85 DEVALIKEGAVLMCHLGAL-----TN---RPVVEALTKRKIT-AYAMELMPRISR-------AQSMDILS------SQSN 142 (384)
T ss_dssp CGGGGSCTTCEEEEECCGG-----GC---HHHHHHHHHTTCE-EEEGGGCCCSGG-------GGGGCHHH------HHHH
T ss_pred HHHHhhccCCEEEEEeccc-----CC---HHHHHHHHHCCCE-EEEecccccccc-------ccccchhh------HHHH
Confidence 111 011112222210 00 1122233322221 222222211000 00122222 1112
Q ss_pred HH---HHHHHHHHhCCCc-------cCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC
Q 013638 304 LA---GLLGTVRAQGLSL-------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (439)
Q Consensus 304 LA---gll~A~r~~g~~l-------~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~ 373 (439)
+| +++.+.+..++.. .++...+|+|+|+|.+|.+++..+... |. +++.+|++.--...
T Consensus 143 ~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 143 LAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRL-----GA-------VVMATDVRAATKEQ 210 (384)
T ss_dssp HHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCSTTHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHH
Confidence 22 5556666555411 234459999999999999998876543 42 58899975321000
Q ss_pred CCCCC-------h-------hhhccccccC-CcCCCCCCCCHHHHhccCCCcEEEeccCC-----CCCCCHHHHHHHhc
Q 013638 374 RKNLD-------P-------AAAPFAKDPG-DFMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVKTYFLC 432 (439)
Q Consensus 374 r~~L~-------~-------~k~~fA~~~~-~~~~~~~~~sL~eaV~~vkPtvLIG~S~~-----~G~FteevV~~Ma~ 432 (439)
...+. . .+-.|++... ++.. .....+.+.++. .|++|.++.. +.+++++.++.|.+
T Consensus 211 ~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk~ 286 (384)
T 1l7d_A 211 VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRK-KQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMKP 286 (384)
T ss_dssp HHHTTCEECCC-----------------------C-CHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSCT
T ss_pred HHHcCCeEEeecccccccccccccchhhcCHHHHh-hhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCCC
Confidence 00000 0 0001111100 0000 000127788886 9999998832 35789999999864
No 13
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.07 E-value=0.00093 Score=69.92 Aligned_cols=108 Identities=19% Similarity=0.221 Sum_probs=82.0
Q ss_pred cccc----------ccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhc
Q 013638 289 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 358 (439)
Q Consensus 289 ~~~F----------NDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~ 358 (439)
+|+| .|...||+-.++.|+. |.++..+.. .+++|+|.|..|.++|+.+... |+
T Consensus 209 ~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~G---KTVgVIG~G~IGr~vA~~lraf-----Ga------ 271 (464)
T 3n58_A 209 FPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAG---KVAVVCGYGDVGKGSAQSLAGA-----GA------ 271 (464)
T ss_dssp SCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccC---CEEEEECcCHHHHHHHHHHHHC-----CC------
Confidence 7999 6788999999998886 456888877 9999999999999999887654 43
Q ss_pred CeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 359 NKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 359 ~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
+++.+|.+. .....|.... -...+|.|+++. +|+++-+++..++|+++.++.|.+
T Consensus 272 -~Viv~d~dp-----------~~a~~A~~~G-----~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK~ 326 (464)
T 3n58_A 272 -RVKVTEVDP-----------ICALQAAMDG-----FEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMKD 326 (464)
T ss_dssp -EEEEECSSH-----------HHHHHHHHTT-----CEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSCT
T ss_pred -EEEEEeCCc-----------chhhHHHhcC-----ceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCCC
Confidence 688887532 1111111100 012469999998 999999887789999999999975
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.48 E-value=0.0011 Score=68.42 Aligned_cols=95 Identities=21% Similarity=0.283 Sum_probs=58.4
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCC--------------hhhhcccccc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD--------------PAAAPFAKDP 388 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~--------------~~k~~fA~~~ 388 (439)
..||+|+|+|.+|.++|+.+... |. +++++|++.-..+....+. +.+..|++..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHHTTCEECCCCC----------------
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhc
Confidence 38999999999999999987654 42 6899998764211100010 0011233311
Q ss_pred CC-cCCCCCCCCHHHHhccCCCcEEEeccCC-----CCCCCHHHHHHHhc
Q 013638 389 GD-FMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVKTYFLC 432 (439)
Q Consensus 389 ~~-~~~~~~~~sL~eaV~~vkPtvLIG~S~~-----~G~FteevV~~Ma~ 432 (439)
.+ +. ..+..+|.|+++. .|++|++... |.+||+|+|+.|.+
T Consensus 258 s~~~~-~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk~ 304 (405)
T 4dio_A 258 SGEYQ-VKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMKP 304 (405)
T ss_dssp -CHHH-HHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSCT
T ss_pred chhhh-hhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCCC
Confidence 10 00 0012369999998 9999998433 46899999999975
No 15
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.44 E-value=0.0036 Score=62.25 Aligned_cols=130 Identities=17% Similarity=0.135 Sum_probs=90.6
Q ss_pred HHHHHHHHHhC--Cce---EEEEecCCC--chHHHHHHHHhh--cccccc---------cC-cchhHHHHHHHHHHHHHH
Q 013638 253 DEFMEAVHARW--PKA---IVQFEDFQM--KWAFETLERYRK--RFCMFN---------DD-IQGTAGVALAGLLGTVRA 313 (439)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~--~naf~iL~ryr~--~~~~FN---------DD-iQGTaaV~LAgll~A~r~ 313 (439)
+|+.+.+.+.- |++ ++|+==.+. -+..++++.-.- .+=.|| .+ ..+-.-+|-.|++-.++.
T Consensus 79 ~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~ 158 (301)
T 1a4i_A 79 SEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKE 158 (301)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHH
Confidence 55666666654 643 666543333 455566654321 222222 11 123445678889999999
Q ss_pred hCCCccCCCCceEEEeCch-hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcC
Q 013638 314 QGLSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFM 392 (439)
Q Consensus 314 ~g~~l~dl~~~riv~~GAG-sAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~ 392 (439)
.+.++.. .++||+|+| ..|.-+|.++... | ..+++++++
T Consensus 159 ~~i~l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------------------- 198 (301)
T 1a4i_A 159 TGVPIAG---RHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------------------- 198 (301)
T ss_dssp TTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------------------------
T ss_pred cCCCCCC---CEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC-------------------------
Confidence 9998888 999999999 5799999888653 3 268888642
Q ss_pred CCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHH
Q 013638 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKT 428 (439)
Q Consensus 393 ~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~ 428 (439)
..+|.+.++. +|++|+..+.|+.+|++||+
T Consensus 199 ----t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 228 (301)
T 1a4i_A 199 ----TAHLDEEVNK--GDILVVATGQPEMVKGEWIK 228 (301)
T ss_dssp ----CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----cccHHHHhcc--CCEEEECCCCcccCCHHHcC
Confidence 1359999998 99999999999999999986
No 16
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.24 E-value=0.0068 Score=59.82 Aligned_cols=130 Identities=16% Similarity=0.192 Sum_probs=89.2
Q ss_pred HHHHHHHHHhC--Cce---EEEEecCCCchHHHHHHHHh--hcccccc---------cCcchhHHHHHHHHHHHHHHhCC
Q 013638 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFN---------DDIQGTAGVALAGLLGTVRAQGL 316 (439)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~~naf~iL~ryr--~~~~~FN---------DDiQGTaaV~LAgll~A~r~~g~ 316 (439)
+|+.+.+.+.. |++ ++|+==.+.-+..++++.-. +.+=.|| .+-.|-.-+|-.|++..++..+.
T Consensus 77 ~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDg~~~~N~g~l~~g~~~g~~PcTp~gv~~lL~~~~i 156 (285)
T 3p2o_A 77 NELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEI 156 (285)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTTCCSSCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcccccccCCHhhhhhhhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 56666666664 553 55553223334444554432 2222222 22222345788889999999999
Q ss_pred CccCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCC
Q 013638 317 SLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLR 395 (439)
Q Consensus 317 ~l~dl~~~riv~~GAGs-AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~ 395 (439)
+++. .++|++|+|. .|..+|.++... |. .+++++++
T Consensus 157 ~l~G---k~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~---------------------------- 193 (285)
T 3p2o_A 157 DLEG---KDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK---------------------------- 193 (285)
T ss_dssp CCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT----------------------------
T ss_pred CCCC---CEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC----------------------------
Confidence 9888 9999999876 899999988763 32 57787652
Q ss_pred CCCCHHHHhccCCCcEEEeccCCCCCCCHHHHH
Q 013638 396 EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKT 428 (439)
Q Consensus 396 ~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~ 428 (439)
..+|.+.++. +|++|...+.|+.+++|||+
T Consensus 194 -t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 223 (285)
T 3p2o_A 194 -TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK 223 (285)
T ss_dssp -CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC
T ss_pred -chhHHHHhhc--CCEEEECCCCCCcCCHHHcC
Confidence 1248899998 99999999999999999885
No 17
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.23 E-value=0.0067 Score=59.87 Aligned_cols=83 Identities=18% Similarity=0.243 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHhCCCccCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCC
Q 013638 300 AGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD 378 (439)
Q Consensus 300 aaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGs-AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~ 378 (439)
.-+|-.|++..++..+.+++. .++|++|+|. .|..+|.++... |. .+++++|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~----------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEG---AYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF----------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-----------
T ss_pred CCCCHHHHHHHHHHhCCCCCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-----------
Confidence 346777889999999998888 9999999876 899999988653 32 57777642
Q ss_pred hhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHH
Q 013638 379 PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKT 428 (439)
Q Consensus 379 ~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~ 428 (439)
..+|.+.++. +|++|...+.|+.+++|||+
T Consensus 195 ------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 ------------------TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp ------------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred ------------------chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1248999998 99999999999999999885
No 18
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.08 E-value=0.0083 Score=59.24 Aligned_cols=83 Identities=18% Similarity=0.232 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHhCCCccCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCC
Q 013638 300 AGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD 378 (439)
Q Consensus 300 aaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGs-AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~ 378 (439)
.-+|-.|++..++..+.+++. .++|++|+|. .|..+|.++... |. .+++++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~G---k~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~----------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYG---MDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF----------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTT---CEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-----------
T ss_pred CCCCHHHHHHHHHHhCCCCCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-----------
Confidence 346778899999999998888 9999999875 899999988653 32 57777541
Q ss_pred hhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHH
Q 013638 379 PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKT 428 (439)
Q Consensus 379 ~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~ 428 (439)
..+|.+.++. +|++|...+.|+.+++|||+
T Consensus 195 ------------------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (286)
T 4a5o_A 195 ------------------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK 224 (286)
T ss_dssp ------------------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC
T ss_pred ------------------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC
Confidence 1248899998 99999999999999999885
No 19
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.99 E-value=0.0067 Score=59.98 Aligned_cols=130 Identities=16% Similarity=0.122 Sum_probs=87.9
Q ss_pred HHHHHHHHHhC--Cce---EEEEecCCCchHHHHHHHHhh--ccccccc--------CcchhHHHHHHHHHHHHHHhCCC
Q 013638 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYRK--RFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (439)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~~naf~iL~ryr~--~~~~FND--------DiQGTaaV~LAgll~A~r~~g~~ 317 (439)
+|+.+.+.+.- |++ ++|+==.+.-+..++++.-.- .+=.||. ...+-.-+|-.|++-.++..+.+
T Consensus 77 ~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~ 156 (288)
T 1b0a_A 77 AELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNID 156 (288)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhHHhCCCCCCCCCcHHHHHHHHHHcCCC
Confidence 56666666664 643 667643334444444443211 1111111 01234556788899999999998
Q ss_pred ccCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCC
Q 013638 318 LTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (439)
Q Consensus 318 l~dl~~~riv~~GAGs-AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~ 396 (439)
+.. .++||+|+|. .|.-+|.++... | ..+++++++
T Consensus 157 l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~----------------------------- 192 (288)
T 1b0a_A 157 TFG---LNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF----------------------------- 192 (288)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS-----------------------------
T ss_pred CCC---CEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-----------------------------
Confidence 888 9999999995 699998887653 3 368888631
Q ss_pred CCCHHHHhccCCCcEEEeccCCCCCCCHHHHH
Q 013638 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVKT 428 (439)
Q Consensus 397 ~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~ 428 (439)
..+|.+.++. +|++|+..+.|+.+|+|||+
T Consensus 193 t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk 222 (288)
T 1b0a_A 193 TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK 222 (288)
T ss_dssp CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC
T ss_pred chhHHHHhcc--CCEEEECCCCcCcCCHHHcC
Confidence 1358999998 99999999999999999874
No 20
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.89 E-value=0.0025 Score=65.12 Aligned_cols=94 Identities=17% Similarity=0.216 Sum_probs=56.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCC-------C---hhhhccccccCC-cC
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-------D---PAAAPFAKDPGD-FM 392 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L-------~---~~k~~fA~~~~~-~~ 392 (439)
.||+|+|+|.+|..+|+.+... |. +++++|++.-..+.-..+ . .....|++...+ +.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHH
Confidence 8999999999999999988764 32 689999875321100000 0 000111111000 00
Q ss_pred CCCCCCCHHHHhccCCCcEEEeccCC-----CCCCCHHHHHHHhc
Q 013638 393 GLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVKTYFLC 432 (439)
Q Consensus 393 ~~~~~~sL~eaV~~vkPtvLIG~S~~-----~G~FteevV~~Ma~ 432 (439)
.....+|.|+++. .|++|++... |.+||+++++.|.+
T Consensus 253 -~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mkp 294 (381)
T 3p2y_A 253 -AQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQP 294 (381)
T ss_dssp -HHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSCT
T ss_pred -hhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCCC
Confidence 0012358899988 9999997433 46899999999975
No 21
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.83 E-value=0.01 Score=58.29 Aligned_cols=128 Identities=10% Similarity=0.124 Sum_probs=88.4
Q ss_pred HHHHHHHHHhC--Cce---EEEEecCCCchHHHHHHHHh--hcccccccC--------cchhHHHHHHHHHHHHHHhCCC
Q 013638 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFNDD--------IQGTAGVALAGLLGTVRAQGLS 317 (439)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~~naf~iL~ryr--~~~~~FNDD--------iQGTaaV~LAgll~A~r~~g~~ 317 (439)
+|+.+.+++.. |++ ++|+==.+.-+..++++.-. +.+=.||.- ..+-.-+|-.|++..++..+
T Consensus 70 ~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~~-- 147 (276)
T 3ngx_A 70 KDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIMDYYG-- 147 (276)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchhhhhcCCCCCCCCcHHHHHHHHHHhC--
Confidence 66777777665 653 66654333344455555432 223333321 12334567889999999998
Q ss_pred ccCCCCceEEEeCch-hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCC
Q 013638 318 LTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (439)
Q Consensus 318 l~dl~~~riv~~GAG-sAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~ 396 (439)
++. .++|++|+| ..|..+|.++... |. .+++++++
T Consensus 148 l~G---k~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~----------------------------- 183 (276)
T 3ngx_A 148 YHE---NTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK----------------------------- 183 (276)
T ss_dssp CCS---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-----------------------------
T ss_pred cCC---CEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC-----------------------------
Confidence 666 999999997 5899999988763 32 57888652
Q ss_pred CCCHHHHhccCCCcEEEeccCCCCCCCHHHHH
Q 013638 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVKT 428 (439)
Q Consensus 397 ~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~ 428 (439)
..+|.+.++. +|++|...+.|+.++++||+
T Consensus 184 t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 213 (276)
T 3ngx_A 184 TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT 213 (276)
T ss_dssp CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC
T ss_pred cccHHHhhcc--CCEEEECCCCCccccHhhcc
Confidence 1348999999 99999999999999999874
No 22
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=95.80 E-value=0.06 Score=55.82 Aligned_cols=172 Identities=15% Similarity=0.150 Sum_probs=111.2
Q ss_pred CCChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCchH-H-HHHHHHhhcc-----ccc----------ccCcchhHHHH
Q 013638 242 RLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA-F-ETLERYRKRF-----CMF----------NDDIQGTAGVA 303 (439)
Q Consensus 242 R~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~na-f-~iL~ryr~~~-----~~F----------NDDiQGTaaV~ 303 (439)
..+..|-..|...|++++...- |+.-|-=+|++..-. . -+.+.|+... .|+ .+--.-||-=+
T Consensus 125 ~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 125 TMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp GSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 3556777888999999998876 877888899987422 2 2557775421 122 23345588888
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhh-h
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA-A 382 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k-~ 382 (439)
..++-.+++..|.+++. .||+|-|.|..|...|+++.+. |. +-+.+.|++|-|.+.. .|+... +
T Consensus 205 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~-GlD~~~l~ 269 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQN---ARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD-GLDIPYLL 269 (424)
T ss_dssp HHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCccc---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHH
Confidence 88889999999998887 9999999999999999998764 42 3467999999998754 233221 1
Q ss_pred ccccccCCcCCC-CCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHH
Q 013638 383 PFAKDPGDFMGL-REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYF 430 (439)
Q Consensus 383 ~fA~~~~~~~~~-~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~M 430 (439)
.+........+- ...-+-.+ +-.++.||||=++. .+.+|++-++.+
T Consensus 270 ~~~~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~-~n~I~~~~a~~l 316 (424)
T 3k92_A 270 DKRDSFGMVTNLFTDVITNEE-LLEKDCDILVPAAI-SNQITAKNAHNI 316 (424)
T ss_dssp HHCCSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSC-SSCBCTTTGGGC
T ss_pred HHHHHhCCCCCCCcEEecCcc-ceeccccEEeecCc-ccccChhhHhhc
Confidence 111111000000 01112233 33457888887766 477777655543
No 23
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=95.70 E-value=0.33 Score=50.72 Aligned_cols=169 Identities=14% Similarity=0.167 Sum_probs=115.0
Q ss_pred cCCChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCchH--HHHHHHHhh---cc-ccc----------ccCcchhHHHH
Q 013638 241 PRLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRK---RF-CMF----------NDDIQGTAGVA 303 (439)
Q Consensus 241 ~R~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~na--f~iL~ryr~---~~-~~F----------NDDiQGTaaV~ 303 (439)
+..+..|-..|...|+..+.+.. |..-|--.|++..-- --+...|+. .. +|| .+.-.-||-=+
T Consensus 139 k~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv 218 (450)
T 4fcc_A 139 KGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGL 218 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeH
Confidence 34577888899999999987766 889999999976432 124445543 32 232 13333477777
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhc
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP 383 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~ 383 (439)
.-++-.+++..|.+|+. .||+|-|.|..|...|+.+.+. |. +=|.+-|++|-|.+.. .++..+..
T Consensus 219 ~~~~~~~~~~~~~~l~G---k~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~-Gid~e~l~ 283 (450)
T 4fcc_A 219 VYFTEAMLKRHGMGFEG---MRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES-GFTKEKLA 283 (450)
T ss_dssp HHHHHHHHHHTTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCcCC---CEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC-CCCHHHHH
Confidence 77888899999998888 9999999999999999988764 43 3566789999988754 24332211
Q ss_pred ---------------cccccC-CcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 384 ---------------FAKDPG-DFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 384 ---------------fA~~~~-~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
|+.... .+ -.... +-.++.|||+=+.. .+.+|++-++.+.+
T Consensus 284 ~l~e~k~~~~g~v~~~~~~~g~~~---~~~~~----i~~~~~DI~iPcAl-~~~I~~~~a~~L~a 340 (450)
T 4fcc_A 284 RLIEIKSSRDGRVADYAKEFGLVY---LEGQQ----PWSVPVDIALPCAT-QNELDVDAAHQLIA 340 (450)
T ss_dssp HHHHHHTSTTCCHHHHHHHHTCEE---EETCC----GGGSCCSEEEECSC-TTCBCHHHHHHHHH
T ss_pred HHHHHhcccCCccccccccCCcEE---ecCcc----cccCCccEEeeccc-cccccHHHHHHHHh
Confidence 111000 00 00111 23468999998887 68999999998864
No 24
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.70 E-value=0.012 Score=58.41 Aligned_cols=130 Identities=14% Similarity=0.178 Sum_probs=88.9
Q ss_pred HHHHHHHHHhC--Cce---EEEEecCCCchHHHHHHHHh--hcccccc----------cCcchhHHHHHHHHHHHHHHhC
Q 013638 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFN----------DDIQGTAGVALAGLLGTVRAQG 315 (439)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~~naf~iL~ryr--~~~~~FN----------DDiQGTaaV~LAgll~A~r~~g 315 (439)
+|+.+.+.+.. |++ ++|+==.+.-+..++++.-. +.+=.|| +...|-.-+|-.|++..++-.+
T Consensus 81 ~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~ 160 (300)
T 4a26_A 81 EVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCG 160 (300)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcC
Confidence 66777777765 553 55553223334444444332 1122222 1234445577888999999999
Q ss_pred CCccCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCC
Q 013638 316 LSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 394 (439)
Q Consensus 316 ~~l~dl~~~riv~~GAGs-AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~ 394 (439)
.+++. .++|++|+|. .|..+|.++... |. .+++++++
T Consensus 161 i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~--------------------------- 198 (300)
T 4a26_A 161 IEMAG---KRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG--------------------------- 198 (300)
T ss_dssp CCCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT---------------------------
T ss_pred CCCCC---CEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC---------------------------
Confidence 99888 9999999876 899999988763 32 58888761
Q ss_pred CCCCCHH--HHhccCCCcEEEeccCCCCCCCHHHHH
Q 013638 395 REGASLL--EVVRKVKPHVLLGLSGVGGVFNEEVKT 428 (439)
Q Consensus 395 ~~~~sL~--eaV~~vkPtvLIG~S~~~G~FteevV~ 428 (439)
..+|. +.++. +|++|...+.|+.++++||+
T Consensus 199 --T~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk 230 (300)
T 4a26_A 199 --TSTEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK 230 (300)
T ss_dssp --SCHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC
T ss_pred --CCCchhhhhhcc--CCEEEECCCCCCCCcHHhcC
Confidence 01366 88988 99999999999999999874
No 25
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.54 E-value=0.028 Score=54.15 Aligned_cols=136 Identities=13% Similarity=0.089 Sum_probs=83.4
Q ss_pred hCCce-EEEEecCCCchHHHHHHHHhhc-ccccccC------cchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchh
Q 013638 262 RWPKA-IVQFEDFQMKWAFETLERYRKR-FCMFNDD------IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS 333 (439)
Q Consensus 262 ~~P~~-~IqfEDf~~~naf~iL~ryr~~-~~~FNDD------iQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGs 333 (439)
..|+. .|. .+..| ..+.+..+++ +.++|=. .-.+-+|+=.++..++...+..+.. .+++|+|+|.
T Consensus 93 ~~~~l~~i~---~G~d~-id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g---~~v~IiG~G~ 165 (293)
T 3d4o_A 93 KTPNHCVVY---SGISN-TYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHG---ANVAVLGLGR 165 (293)
T ss_dssp TSCTTCEEE---ESSCC-HHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTT---CEEEEECCSH
T ss_pred hCCCCCEEE---ecCCC-HHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCC---CEEEEEeeCH
Confidence 34654 343 33333 4454555554 8888843 3355566656666666667777777 9999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEE
Q 013638 334 AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLL 413 (439)
Q Consensus 334 AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLI 413 (439)
.|..+|+.+... |. +++.+|+..- + +...+..-++.. ...+|.|+++. .|++|
T Consensus 166 iG~~~a~~l~~~-----G~-------~V~~~dr~~~----~--~~~~~~~g~~~~-------~~~~l~~~l~~--aDvVi 218 (293)
T 3d4o_A 166 VGMSVARKFAAL-----GA-------KVKVGARESD----L--LARIAEMGMEPF-------HISKAAQELRD--VDVCI 218 (293)
T ss_dssp HHHHHHHHHHHT-----TC-------EEEEEESSHH----H--HHHHHHTTSEEE-------EGGGHHHHTTT--CSEEE
T ss_pred HHHHHHHHHHhC-----CC-------EEEEEECCHH----H--HHHHHHCCCeec-------ChhhHHHHhcC--CCEEE
Confidence 999999987543 43 6888887421 0 000000000000 01357888876 89988
Q ss_pred eccCCCCCCCHHHHHHHhc
Q 013638 414 GLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 414 G~S~~~G~FteevV~~Ma~ 432 (439)
-... .+.++++.++.|.+
T Consensus 219 ~~~p-~~~i~~~~l~~mk~ 236 (293)
T 3d4o_A 219 NTIP-ALVVTANVLAEMPS 236 (293)
T ss_dssp ECCS-SCCBCHHHHHHSCT
T ss_pred ECCC-hHHhCHHHHHhcCC
Confidence 7653 58888888887754
No 26
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.40 E-value=0.096 Score=54.16 Aligned_cols=117 Identities=18% Similarity=0.195 Sum_probs=87.1
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCch--HHHHHHHHhhcc-----ccc----------ccCcchhHHHHH
Q 013638 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKRF-----CMF----------NDDIQGTAGVAL 304 (439)
Q Consensus 243 ~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~n--af~iL~ryr~~~-----~~F----------NDDiQGTaaV~L 304 (439)
.+..|-..|...|+.++...- |..-|-=+|++..- ---+.+.|+... .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 455677888999999998877 88888999998753 223567774321 122 233344766666
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEecccccccCC
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKER 374 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLl~~~r 374 (439)
-++-.+++..|.+|+. .||+|.|.|..|...|+++.+. |. +++ +.|++|-|.+..
T Consensus 203 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~~a~~L~~~-----Ga-------kVVavsD~~G~i~dp~ 258 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRG---ARVVVQGLGQVGAAVALHAERL-----GM-------RVVAVATSMGGMYAPE 258 (419)
T ss_dssp HHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEEETTEEEECTT
T ss_pred HHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEcCCCeEECCC
Confidence 7788888889988777 9999999999999999888653 43 566 999999988754
No 27
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.32 E-value=0.011 Score=59.17 Aligned_cols=102 Identities=15% Similarity=0.176 Sum_probs=68.4
Q ss_pred HHHHHHHHHHH---------hCCCccCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccccc
Q 013638 303 ALAGLLGTVRA---------QGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITK 372 (439)
Q Consensus 303 ~LAgll~A~r~---------~g~~l~dl~~~riv~~GAGs-AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~ 372 (439)
|-.|.+-.++. .|.++.. .+++|+|+|. .|.-+|.++... | .+++++|+...-..
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~g---k~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~ 215 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYG---KKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKF 215 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTT---CEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEE
T ss_pred cHHHHHHHHHhhcccccccccCCCCCC---CEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHH
Confidence 33444566665 5667777 9999999995 598888887653 3 26999998766555
Q ss_pred CCC-CCChhhhccccccCCcCCCCCC--CCHHHHhccCCCcEEEeccCCCCC-CCHHHHH
Q 013638 373 ERK-NLDPAAAPFAKDPGDFMGLREG--ASLLEVVRKVKPHVLLGLSGVGGV-FNEEVKT 428 (439)
Q Consensus 373 ~r~-~L~~~k~~fA~~~~~~~~~~~~--~sL~eaV~~vkPtvLIG~S~~~G~-FteevV~ 428 (439)
.|. .+... ++..... ... .+|.++++. +|++|+..+.++. +|+|+|+
T Consensus 216 ~ra~~la~~----~~~~t~~---~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk 266 (320)
T 1edz_A 216 TRGESLKLN----KHHVEDL---GEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK 266 (320)
T ss_dssp ESCCCSSCC----CCEEEEE---EECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC
T ss_pred hHHHHHhhh----ccccccc---ccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC
Confidence 542 23210 1110000 001 359999999 9999999999997 9999875
No 28
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.16 E-value=0.02 Score=56.39 Aligned_cols=132 Identities=16% Similarity=0.208 Sum_probs=87.9
Q ss_pred HHHHHHHHHhC--Cce---EEEEecCCCchHHHHHHHHhh--ccccccc--------CcchhHHHHHHHHHHHHHHhCCC
Q 013638 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYRK--RFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (439)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~~naf~iL~ryr~--~~~~FND--------DiQGTaaV~LAgll~A~r~~g~~ 317 (439)
+|+.+.+.+.- |++ ++|+==.+.-+..++++.-.- .+=.||. ...+-.-+|-.|++-.++..+.+
T Consensus 76 ~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~ 155 (281)
T 2c2x_A 76 ATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLGTPAPLPCTPRGIVHLLRRYDIS 155 (281)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHTCCCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 55666666554 643 777644444455555554321 1222221 01233456777788888999888
Q ss_pred ccCCCCceEEEeCchh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCC
Q 013638 318 LTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (439)
Q Consensus 318 l~dl~~~riv~~GAGs-AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~ 396 (439)
++. .+++++|+|. .|.-+|.++.. .|- -..+++++|+
T Consensus 156 l~g---k~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~----------------------------- 193 (281)
T 2c2x_A 156 IAG---AHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG----------------------------- 193 (281)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT-----------------------------
T ss_pred CCC---CEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc-----------------------------
Confidence 887 9999999996 58888877654 210 1367777431
Q ss_pred CCCHHHHhccCCCcEEEeccCCCCCCCHHHHH
Q 013638 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVKT 428 (439)
Q Consensus 397 ~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~ 428 (439)
..+|.+.++. +|++|+..+.|+.+|+|||+
T Consensus 194 t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 223 (281)
T 2c2x_A 194 TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR 223 (281)
T ss_dssp CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC
T ss_pred hhHHHHHHhh--CCEEEECCCCCcccCHHHcC
Confidence 1359999998 99999999999999999985
No 29
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.15 E-value=0.28 Score=51.26 Aligned_cols=169 Identities=15% Similarity=0.164 Sum_probs=111.2
Q ss_pred CCChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCch--HHHHHHHHhhc---cc-cc----------ccCcchhHHHHH
Q 013638 242 RLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR---FC-MF----------NDDIQGTAGVAL 304 (439)
Q Consensus 242 R~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~n--af~iL~ryr~~---~~-~F----------NDDiQGTaaV~L 304 (439)
-.+..|...|...||+.+.+.. |..-|-=+|++..- ---+.+.|+.. .+ |+ ..--.-||-=+.
T Consensus 144 ~~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~ 223 (456)
T 3r3j_A 144 GKSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVV 223 (456)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHH
Confidence 3466788888888999986555 88889999998743 22256677643 21 11 112234666666
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhc-
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP- 383 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~- 383 (439)
-++-.+++..|.+|+. .||+|-|.|..|...|+.+.+. |. +=+.+.|++|-|.+.. .|+..+..
T Consensus 224 ~~~~~~~~~~g~~l~g---~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~-Gld~~~l~~ 288 (456)
T 3r3j_A 224 YFAENVLKDLNDNLEN---KKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN-GFTKEQLNY 288 (456)
T ss_dssp HHHHHHHHTTTCCSTT---CCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT-CCCHHHHHH
T ss_pred HHHHHHHHHcCCCccC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHHH
Confidence 7777888888888777 9999999999999999988764 32 2345899999888754 34322211
Q ss_pred --------------cccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHh
Q 013638 384 --------------FAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFL 431 (439)
Q Consensus 384 --------------fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma 431 (439)
|+...+... .-.... +-.++.||||=+.. ++.+|++-++.+-
T Consensus 289 ~~~~k~~~~~~v~~~~~~~~~a~-~v~~~~----i~~~~~DI~iPcA~-~~~I~~~na~~l~ 344 (456)
T 3r3j_A 289 IMDIKNNQRLRLKEYLKYSKTAK-YFENQK----PWNIPCDIAFPCAT-QNEINENDADLFI 344 (456)
T ss_dssp HHHHHHTSCCCGGGGGGTCSSCE-EECSCC----GGGSCCSEEEECSC-TTCBCHHHHHHHH
T ss_pred HHHHHHhcCcchhhhhhcCCCce-EeCCcc----ccccCccEEEeCCC-ccchhhHHHHHHH
Confidence 111000000 001112 23467999998887 7999999999983
No 30
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.11 E-value=0.12 Score=53.78 Aligned_cols=169 Identities=12% Similarity=0.118 Sum_probs=108.0
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCc--hHHHHHHHHhhc-----cccc----------ccCcchhHHHHH
Q 013638 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMK--WAFETLERYRKR-----FCMF----------NDDIQGTAGVAL 304 (439)
Q Consensus 243 ~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~--naf~iL~ryr~~-----~~~F----------NDDiQGTaaV~L 304 (439)
.+..|-..|...|+.++...- |..-|-=+|++.. .---+.+.|+.. -.|+ .+.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 455677888999999999877 8888888999874 222356677432 0222 233344666666
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEecccccccCCC-C---CCh
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERK-N---LDP 379 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLl~~~r~-~---L~~ 379 (439)
-++-.+++..|.+++. .||+|.|.|..|...|++|.+. |. +++ +.|++|-+.+... + |..
T Consensus 220 ~~~~~~~~~~g~~l~g---~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~Gld~~~l~~ 284 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEG---ARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEAGIDPYDLLR 284 (440)
T ss_dssp HHHHHHHHHHTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTTCCCHHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCCCCCHHHHHH
Confidence 6778888888988777 9999999999999999888663 42 455 9999999887642 1 222
Q ss_pred hhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHH
Q 013638 380 AAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYF 430 (439)
Q Consensus 380 ~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~M 430 (439)
++..+-. -.++.+ ....+-.| +-.+++||||=++. ++.+|++-++.+
T Consensus 285 ~~~~~g~-i~~y~~-a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l 331 (440)
T 3aog_A 285 HVQEFGG-VRGYPK-AEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI 331 (440)
T ss_dssp HHHHTSS-STTCTT-SEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC
T ss_pred HHHhcCC-cccCCC-ceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc
Confidence 2222110 000000 01112334 34577888887765 577776655543
No 31
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.90 E-value=0.16 Score=52.41 Aligned_cols=171 Identities=15% Similarity=0.133 Sum_probs=102.2
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCch--HHHHHHHHhhcc------ccc----------ccCcchhHHHH
Q 013638 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKRF------CMF----------NDDIQGTAGVA 303 (439)
Q Consensus 243 ~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~n--af~iL~ryr~~~------~~F----------NDDiQGTaaV~ 303 (439)
.+..|-..|...|+.++...- |..-|-=+|++..- ---+.+.|+... .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 455677888999999998877 88889999999752 224667776321 122 22223466666
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc-----cccccCCCCCC
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD-----GLITKERKNLD 378 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~-----GLl~~~r~~L~ 378 (439)
.-++-.+++..|.+++. .||+|.|.|..|...|++|.+. |. +=+-+.|++ |-|.+... |+
T Consensus 196 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~~~~~~G~i~d~~G-ld 260 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMED---AKIAVQGFGNVGTFTVKNIERQ-----GG------KVCAIAEWDRNEGNYALYNENG-ID 260 (421)
T ss_dssp HHHHHHHHHHTTCCGGG---SCEEEECCSHHHHHHHHHHHHT-----TC------CEEECCBCCSSSCSBCCBCSSC-CC
T ss_pred HHHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----CC------EEEEEEecCCCccceEEECCCC-CC
Confidence 66777888888988777 9999999999999999888653 53 234489999 99887642 32
Q ss_pred hhh-hccccccCCcCCCC--CCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHH
Q 013638 379 PAA-APFAKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYF 430 (439)
Q Consensus 379 ~~k-~~fA~~~~~~~~~~--~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~M 430 (439)
... ..+......+..-+ ...+-.+ +-.+++||||=++. ++.+|++-.+.+
T Consensus 261 ~~~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l 313 (421)
T 2yfq_A 261 FKELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI 313 (421)
T ss_dssp HHHHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC
T ss_pred HHHHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc
Confidence 211 11111000000000 0011122 23467888887664 677887766654
No 32
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=93.52 E-value=0.68 Score=48.57 Aligned_cols=168 Identities=14% Similarity=0.118 Sum_probs=109.1
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCch--HHHHHHHHhhc--c--ccc----------ccCcchhHHHHHH
Q 013638 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR--F--CMF----------NDDIQGTAGVALA 305 (439)
Q Consensus 243 ~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~n--af~iL~ryr~~--~--~~F----------NDDiQGTaaV~LA 305 (439)
.+..|...|...||+.+.+.. |..-|-=+|++..- ---+.+.|+.. . .|+ .++-.-||-=+.-
T Consensus 158 ~S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~ 237 (470)
T 2bma_A 158 KSDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVY 237 (470)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHH
Confidence 356677788888999888654 88888899998742 22356777642 1 111 1122346666666
Q ss_pred HHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEecccccccCCCCCChh----
Q 013638 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPA---- 380 (439)
Q Consensus 306 gll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLl~~~r~~L~~~---- 380 (439)
++-.+++..|.+|+. .||+|-|.|..|...|+.+.+. |. +++ +.|++|-|.+.. .++..
T Consensus 238 ~~~~~l~~~G~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~-Gid~edl~~ 301 (470)
T 2bma_A 238 FVLEVLKSLNIPVEK---QTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN-GFTHENLEF 301 (470)
T ss_dssp HHHHHHHTTTCCGGG---CEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS-CCCHHHHHH
T ss_pred HHHHHHHhccCCcCC---CEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC-CCCHHHHHH
Confidence 777888888877777 9999999999999999988664 43 455 899999888754 24222
Q ss_pred ----h-------hccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 381 ----A-------APFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 381 ----k-------~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
+ ..|+...+.. ...+-.+. -.++.||||=+.. ++.+|++-++.+-+
T Consensus 302 l~~~k~~~~g~v~~~~~~~~~a----~~v~~~~~-~~~~~DI~iPcA~-~~~I~~~na~~l~~ 358 (470)
T 2bma_A 302 LIDLKEEKKGRIKEYLNHSSTA----KYFPNEKP-WGVPCTLAFPCAT-QNDVDLDQAKLLQK 358 (470)
T ss_dssp HHHHHTTTTCCGGGGGGTCSSC----EECSSCCT-TSSCCSEEEECSS-TTCBCSHHHHHHHH
T ss_pred HHHHHHhcCCcHHHHHhhcCCc----EEecCcCe-eecCccEEEeccc-cCcCCHHHHHHHHh
Confidence 1 1122100000 00000122 2568999998885 79999999998843
No 33
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=93.43 E-value=0.66 Score=47.85 Aligned_cols=171 Identities=15% Similarity=0.161 Sum_probs=106.3
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCch--HHHHHHHHhhc-----cccccc----------CcchhHHHHH
Q 013638 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR-----FCMFND----------DIQGTAGVAL 304 (439)
Q Consensus 243 ~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~n--af~iL~ryr~~-----~~~FND----------DiQGTaaV~L 304 (439)
.+.+|-..|...|+.++...- |..-|-=+|++..- ---+.+.|+.. ..++-- --.-||-=+.
T Consensus 114 ~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 193 (415)
T 2tmg_A 114 LSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVK 193 (415)
T ss_dssp SCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHH
Confidence 345677788999999998877 88888889998752 22355666432 123322 2233555556
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEecccccccCCCCCChhh-h
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA-A 382 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLl~~~r~~L~~~k-~ 382 (439)
-++-.+++..|.+++. .||+|.|.|..|...|++|.+ +.|. +++ +.|++|-+.+.. .|+... .
T Consensus 194 ~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~e----~~Ga-------kvVavsD~~G~i~dp~-Gld~~~l~ 258 (415)
T 2tmg_A 194 VCAGLAMDVLGIDPKK---ATVAVQGFGNVGQFAALLISQ----ELGS-------KVVAVSDSRGGIYNPE-GFDVEELI 258 (415)
T ss_dssp HHHHHHHHHTTCCTTT---CEEEEECCSHHHHHHHHHHHH----TTCC-------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHcCCCcCC---CEEEEECCcHHHHHHHHHHHH----hcCC-------EEEEEEeCCCeEECCC-CCCHHHHH
Confidence 6677788888988777 999999999999999988765 1343 455 999999988764 233221 1
Q ss_pred ccccccCCcCCCC--CCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHH
Q 013638 383 PFAKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYF 430 (439)
Q Consensus 383 ~fA~~~~~~~~~~--~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~M 430 (439)
.+......+..-+ ...+-.| +-.++.|+||=++. ++.+|++-.+.+
T Consensus 259 ~~~~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l 306 (415)
T 2tmg_A 259 RYKKEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI 306 (415)
T ss_dssp HHHHHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC
T ss_pred HHHHhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc
Confidence 1111110110000 0112333 44567888887665 577777666544
No 34
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=93.29 E-value=0.12 Score=54.48 Aligned_cols=99 Identities=18% Similarity=0.221 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCC
Q 013638 298 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL 377 (439)
Q Consensus 298 GTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L 377 (439)
|+......|+ .+.+|..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~-------- 311 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAG---KIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI-------- 311 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH--------
T ss_pred hhhhhhhhhh---hhccccccCC---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH--------
Confidence 3333344552 2567877777 9999999999999999987643 43 6888887521
Q ss_pred ChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 378 DPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 378 ~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
+..-+... . ....+|.|+++. .|+++......++|+++.++.|.+
T Consensus 312 ---~~~~a~~~-G----~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK~ 356 (494)
T 3d64_A 312 ---CALQAAME-G----YRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMRH 356 (494)
T ss_dssp ---HHHHHHTT-T----CEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCCT
T ss_pred ---hHHHHHHc-C----CEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCCC
Confidence 10000000 0 012469999988 999999877789999999999965
No 35
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=93.03 E-value=0.17 Score=53.13 Aligned_cols=103 Identities=21% Similarity=0.309 Sum_probs=70.3
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC
Q 013638 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (439)
Q Consensus 294 DDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~ 373 (439)
+.+.|+......|+ .+.++..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++..-
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~~--- 292 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISG---KIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPIC--- 292 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTT---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHHH---
T ss_pred hchHhHHHHHhhhh---hhccccccCC---CEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChhh---
Confidence 34455555555663 2457777777 9999999999999999998764 43 78888875210
Q ss_pred CCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 374 RKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 374 r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
.. ..+... . ...+|.|+++. .|++|.+....++++++.++.|.+
T Consensus 293 ------~~-~a~~~g--~----~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK~ 336 (479)
T 1v8b_A 293 ------AI-QAVMEG--F----NVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMKN 336 (479)
T ss_dssp ------HH-HHHTTT--C----EECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCCT
T ss_pred ------HH-HHHHcC--C----EecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcCC
Confidence 00 011000 0 12469999987 999999877789999998888865
No 36
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.02 E-value=0.54 Score=47.80 Aligned_cols=88 Identities=18% Similarity=0.207 Sum_probs=66.3
Q ss_pred CCce-EEEEecCCCchHHHHHHHHh-hcccccccCcc---hhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHH
Q 013638 263 WPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLG 337 (439)
Q Consensus 263 ~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQ---GTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiG 337 (439)
.|+. .|+--..+..|- .+ +..+ ..+++.|.--- .+|=-+++.+++..|..|..+.+ .+|.|+|.|..|-.
T Consensus 56 ~~~Lk~I~~~~~G~D~i-D~-~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g---~tvGIIGlG~IG~~ 130 (380)
T 2o4c_A 56 GSPVRFVGTCTIGTDHL-DL-DYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAE---RTYGVVGAGQVGGR 130 (380)
T ss_dssp TSCCCEEEECSSCSTTB-CH-HHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGG---CEEEEECCSHHHHH
T ss_pred CCCceEEEEcCcccchh-hH-HHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCC---CEEEEEeCCHHHHH
Confidence 5887 899888888773 11 2223 34888886433 34445899999999998988777 99999999999999
Q ss_pred HHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 338 VLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 338 iA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+|+.+... |+ +++.+|+.
T Consensus 131 vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 131 LVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp HHHHHHHT-----TC-------EEEEECHH
T ss_pred HHHHHHHC-----CC-------EEEEEcCC
Confidence 99988654 43 68888864
No 37
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.92 E-value=0.1 Score=50.91 Aligned_cols=49 Identities=16% Similarity=0.309 Sum_probs=39.5
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.|++.+++..|.+++. .+++|+|||.||.+++..+.. .|. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~---k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKN---NICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTT---SEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccC---CEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 6889999888888777 999999999888888776654 354 479988874
No 38
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=92.91 E-value=0.12 Score=50.25 Aligned_cols=141 Identities=16% Similarity=0.182 Sum_probs=76.5
Q ss_pred HHHHHHHHHHhCCce-EEEEecCCCchHHHHHHHHhhc------c-ccccc-C--cchhHHHHHHHHHHHHHHhCCCccC
Q 013638 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFND-D--IQGTAGVALAGLLGTVRAQGLSLTD 320 (439)
Q Consensus 252 vdefv~av~~~~P~~-~IqfEDf~~~naf~iL~ryr~~------~-~~FND-D--iQGTaaV~LAgll~A~r~~g~~l~d 320 (439)
+++|++.++. +++ +++.-==-...++++|++.-+. + ++.++ | ..|.-.= -.|++.+++..+..++.
T Consensus 51 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~lD~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~l~~~~~~l~~ 127 (283)
T 3jyo_A 51 LKTLLDAALY--LGFNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDATGHTTGHNTD-VSGFGRGMEEGLPNAKL 127 (283)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCTTTTGGGSSEECHHHHHHTCCCEEEECTTSCEEEECHH-HHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHhh--CCCCEEEECcccHHHHHHHhhhCCHHHHHhCcceEEEECCCCeEEEecCC-HHHHHHHHHHhCcCcCC
Confidence 5667776664 332 4433322233455555543332 1 34444 4 2332111 35788888888877777
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccC--CcCCCCCCC
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG--DFMGLREGA 398 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~--~~~~~~~~~ 398 (439)
.+++|+|||.+|.+++..+.. .|. ++|+++|+. .++ .....+.+..... .... ....
T Consensus 128 ---k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~--a~~la~~~~~~~~~~~i~~-~~~~ 186 (283)
T 3jyo_A 128 ---DSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR--AQALADVINNAVGREAVVG-VDAR 186 (283)
T ss_dssp ---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH--HHHHHHHHHHHHTSCCEEE-ECST
T ss_pred ---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH--HHHHHHHHHhhcCCceEEE-cCHH
Confidence 999999999777776665544 454 479988874 111 1111111111100 0000 0123
Q ss_pred CHHHHhccCCCcEEEeccCC
Q 013638 399 SLLEVVRKVKPHVLLGLSGV 418 (439)
Q Consensus 399 sL~eaV~~vkPtvLIG~S~~ 418 (439)
+|.++++. +|++|-++..
T Consensus 187 ~l~~~l~~--~DiVInaTp~ 204 (283)
T 3jyo_A 187 GIEDVIAA--ADGVVNATPM 204 (283)
T ss_dssp THHHHHHH--SSEEEECSST
T ss_pred HHHHHHhc--CCEEEECCCC
Confidence 68888887 9999977653
No 39
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.81 E-value=0.13 Score=51.07 Aligned_cols=50 Identities=18% Similarity=0.397 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.|++.+++..+..++. .+++|+|||.+|.+||..+.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~g---k~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIG---KKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTT---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccC---CEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 35688888888887777 999999999777776666544 454 489999885
No 40
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.73 E-value=0.053 Score=53.94 Aligned_cols=90 Identities=23% Similarity=0.315 Sum_probs=54.9
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCH
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL 400 (439)
+...+++|+|||.+|.+++..+... |. +++++|+.- ++ +...+..++....-.. ....++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~-----Ga-------~V~v~dr~~----~r--~~~~~~~~~~~~~~~~--~~~~~~ 224 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL-----GA-------QVQIFDINV----ER--LSYLETLFGSRVELLY--SNSAEI 224 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----HH--HHHHHHHHGGGSEEEE--CCHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----HH--HHHHHHhhCceeEeee--CCHHHH
Confidence 4458999999999999998876543 42 688888741 11 1111222221100000 011247
Q ss_pred HHHhccCCCcEEEeccCCCC-----CCCHHHHHHHhc
Q 013638 401 LEVVRKVKPHVLLGLSGVGG-----VFNEEVKTYFLC 432 (439)
Q Consensus 401 ~eaV~~vkPtvLIG~S~~~G-----~FteevV~~Ma~ 432 (439)
.+.++. .|++|.+++.++ +++++.++.|.+
T Consensus 225 ~~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~~ 259 (361)
T 1pjc_A 225 ETAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMRT 259 (361)
T ss_dssp HHHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSCT
T ss_pred HHHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCCC
Confidence 777876 999999887655 258888887754
No 41
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.69 E-value=0.13 Score=50.99 Aligned_cols=49 Identities=20% Similarity=0.460 Sum_probs=37.8
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.|++.+++..+.+++. .+++|+|||.||.++|..+.. .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~g---k~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRG---KTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 4678888877877777 999999999777777666654 454 479999884
No 42
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.46 E-value=0.12 Score=50.23 Aligned_cols=97 Identities=25% Similarity=0.260 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhCCce-EEEEecCCCchHHHHHHHHhhc------c-c-ccccC--cch--hHHHHHHHHHHHHHHhCCCc
Q 013638 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-C-MFNDD--IQG--TAGVALAGLLGTVRAQGLSL 318 (439)
Q Consensus 252 vdefv~av~~~~P~~-~IqfEDf~~~naf~iL~ryr~~------~-~-~FNDD--iQG--TaaV~LAgll~A~r~~g~~l 318 (439)
+.++++.++. +++ +++.--=-...+++++++.-+. + + +|++| ..| |- -.|++.+++..|.++
T Consensus 50 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD---~~G~~~~L~~~~~~l 124 (281)
T 3o8q_A 50 FTEAAKHFFA--QGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD---GEGLVQDLLAQQVLL 124 (281)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH---HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHh--CCCCEEEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH---HHHHHHHHHHhCCCc
Confidence 5666776664 333 5544332333456665544332 1 2 34444 234 33 357888888888887
Q ss_pred cCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 319 ~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+. .+++|+|||.+|.++|..+.. .|. ++|+++++.
T Consensus 125 ~~---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 125 KG---ATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp TT---CEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred cC---CEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 77 999999999777777665544 454 478888874
No 43
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.40 E-value=0.14 Score=49.55 Aligned_cols=48 Identities=27% Similarity=0.507 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.|++.+++..|.+++. .|++++|||.|+-+|+-.+.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~---~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAG---KRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCccc---CeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 3577888888888887 999999999999888766554 454 57999886
No 44
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.26 E-value=0.082 Score=51.41 Aligned_cols=57 Identities=18% Similarity=0.299 Sum_probs=41.9
Q ss_pred ccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 289 FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 289 ~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.-+|=| -.|++.+++..+.+++. .+++|+|||.+|.++|..+.. .|. ++|+++++.
T Consensus 94 l~G~NTD--------~~G~~~~L~~~~~~l~~---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 150 (277)
T 3don_A 94 WIGYNTD--------GIGYVNGLKQIYEGIED---AYILILGAGGASKGIANELYK-----IVR------PTLTVANRT 150 (277)
T ss_dssp EEEECCH--------HHHHHHHHHHHSTTGGG---CCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC
T ss_pred EEEECCh--------HHHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4555555 34577788888888777 999999999887777766654 454 478888875
No 45
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.25 E-value=0.39 Score=50.49 Aligned_cols=88 Identities=17% Similarity=0.233 Sum_probs=59.5
Q ss_pred HHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCc
Q 013638 312 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 391 (439)
Q Consensus 312 r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~ 391 (439)
|..+..+.. .+|+|+|+|..|.++|..+... |. +++.+|++ +.+...|+...
T Consensus 266 r~~~~~l~G---ktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~-----------~~~~~~A~~~G-- 317 (494)
T 3ce6_A 266 RGTDALIGG---KKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEID-----------PINALQAMMEG-- 317 (494)
T ss_dssp HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT--
T ss_pred hccCCCCCc---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------HHHHHHHHHcC--
Confidence 345555666 9999999999999999877643 42 68888863 12222222110
Q ss_pred CCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 392 ~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
....++.|+++. .|++|-+++..++++++.++.|.+
T Consensus 318 ---a~~~~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk~ 353 (494)
T 3ce6_A 318 ---FDVVTVEEAIGD--ADIVVTATGNKDIIMLEHIKAMKD 353 (494)
T ss_dssp ---CEECCHHHHGGG--CSEEEECSSSSCSBCHHHHHHSCT
T ss_pred ---CEEecHHHHHhC--CCEEEECCCCHHHHHHHHHHhcCC
Confidence 012357788876 899998877778888888888754
No 46
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.24 E-value=0.72 Score=43.85 Aligned_cols=86 Identities=21% Similarity=0.250 Sum_probs=58.7
Q ss_pred eEEEEecCCCchHHHHHHHHhhc-c----cccccCcchhHHHHHHHHHHHHHHh-CCCccCCCCceEEEeC-chhHHHHH
Q 013638 266 AIVQFEDFQMKWAFETLERYRKR-F----CMFNDDIQGTAGVALAGLLGTVRAQ-GLSLTDFADQKIVVVG-AGSAGLGV 338 (439)
Q Consensus 266 ~~IqfEDf~~~naf~iL~ryr~~-~----~~FNDDiQGTaaV~LAgll~A~r~~-g~~l~dl~~~riv~~G-AGsAgiGi 338 (439)
..+.++-+.-..+.+++++-+.. + ++...|..|.- ..-.|++.+++.. +.+++. .+++|.| +|.+|.++
T Consensus 60 t~~~~~G~~~~~~~~~~~~~~~~~~gavnt~~~~~~~G~n-Td~~g~~~~l~~~~~~~l~g---k~vlVtGaaGGiG~ai 135 (287)
T 1lu9_A 60 TAIFVGGGDMAAGERVFEAVKKRFFGPFRVSCMLDSNGSN-TTAAAGVALVVKAAGGSVKG---KKAVVLAGTGPVGMRS 135 (287)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCBTTBCCEEEECSTTHH-HHHHHHHHHHHHHTTSCCTT---CEEEEETCSSHHHHHH
T ss_pred ceEEEccchHHHHHHHHHHHHHhcCCCeEEEEecCCCcCC-chHHHHHHHHHHhhccCCCC---CEEEEECCCcHHHHHH
Confidence 35566766666888999988754 2 22234555532 2346677777766 666666 9999999 89888888
Q ss_pred HHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 339 LKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 339 A~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
|..+.+ .|. +++++|++
T Consensus 136 a~~L~~-----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 136 AALLAG-----EGA-------EVVLCGRK 152 (287)
T ss_dssp HHHHHH-----TTC-------EEEEEESS
T ss_pred HHHHHH-----CcC-------EEEEEECC
Confidence 877765 342 48888874
No 47
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=91.86 E-value=0.12 Score=49.95 Aligned_cols=99 Identities=22% Similarity=0.262 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhCCce-EEEEecCCCchHHHHHHHHhhc------c-cccccC--cchhHHHHHHHHHHH-HHHhCCCccC
Q 013638 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFNDD--IQGTAGVALAGLLGT-VRAQGLSLTD 320 (439)
Q Consensus 252 vdefv~av~~~~P~~-~IqfEDf~~~naf~iL~ryr~~------~-~~FNDD--iQGTaaV~LAgll~A-~r~~g~~l~d 320 (439)
++++++.++. +++ +++.--=-...+++++++..+. + ++.++| ..|.-.= -.|++.+ ++..|.+++.
T Consensus 44 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~~ 120 (272)
T 3pwz_A 44 FEAQVLQFRS--EGGKGMNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLRN 120 (272)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCTT
T ss_pred HHHHHHHHhh--CCCCEEEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCccC
Confidence 5667776664 343 5654443334566666554332 1 234433 3442221 3578888 7777777777
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+++|+|||.+|.++|..+.+ .|. ++|+++++.
T Consensus 121 ---k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 121 ---RRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp ---SEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred ---CEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 999999999777777666544 454 478888873
No 48
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=91.38 E-value=1.2 Score=43.66 Aligned_cols=93 Identities=17% Similarity=0.194 Sum_probs=62.3
Q ss_pred HhCCce-EEEEecCCCchHHHHHHHHh-hcccccccCcch---hHHHHHHHHHHHHHHh---------C----CCccCCC
Q 013638 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQG---TAGVALAGLLGTVRAQ---------G----LSLTDFA 322 (439)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQG---TaaV~LAgll~A~r~~---------g----~~l~dl~ 322 (439)
...|+. .|+.--.+..|- . ++..+ ..+++.|----. +|=-+++.+++..|-. | ..-.+|.
T Consensus 64 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~ 141 (313)
T 2ekl_A 64 EKGKKLKIIARAGIGLDNI-D-TEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELA 141 (313)
T ss_dssp HHCTTCCEEEECSSCCTTB-C-HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCT
T ss_pred hhCCCCeEEEEcCCCCCcc-C-HHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCC
Confidence 346887 888877777663 2 23333 348888754333 3445788888888742 1 1113445
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.+|.|+|.|..|..+|+.+... |. +++.+|+.
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~ 174 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAM-----GM-------KVLAYDIL 174 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 59999999999999999987653 43 68888874
No 49
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.93 E-value=0.42 Score=47.51 Aligned_cols=91 Identities=21% Similarity=0.330 Sum_probs=53.9
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCC
Q 013638 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (439)
Q Consensus 320 dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~s 399 (439)
++...+++|+|+|..|..+|+.+... |. +++++|++- ++ +...+..+..... .. .....+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~-----Ga-------~V~~~d~~~----~~--~~~~~~~~g~~~~-~~-~~~~~~ 222 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGM-----GA-------QVTILDVNH----KR--LQYLDDVFGGRVI-TL-TATEAN 222 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----HH--HHHHHHHTTTSEE-EE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH--HHHHHHhcCceEE-Ee-cCCHHH
Confidence 35559999999999999998877543 42 688888742 11 1111111110000 00 001235
Q ss_pred HHHHhccCCCcEEEeccCCCC-----CCCHHHHHHHhc
Q 013638 400 LLEVVRKVKPHVLLGLSGVGG-----VFNEEVKTYFLC 432 (439)
Q Consensus 400 L~eaV~~vkPtvLIG~S~~~G-----~FteevV~~Ma~ 432 (439)
+.++++. .|++|.+.+.++ +++++.++.|.+
T Consensus 223 l~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk~ 258 (369)
T 2eez_A 223 IKKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMKE 258 (369)
T ss_dssp HHHHHHH--CSEEEECCC-------CCSCHHHHTTSCT
T ss_pred HHHHHhC--CCEEEECCCCCccccchhHHHHHHHhhcC
Confidence 7888886 999998776543 478999888853
No 50
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.93 E-value=0.27 Score=46.80 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.|++.+++..|.+++. .+++|+|||.+|.++|..+.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~---k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPG---LRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCC---CEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 55777788877877777 999999999887777776654 34 268888774
No 51
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.90 E-value=0.23 Score=48.22 Aligned_cols=49 Identities=16% Similarity=0.410 Sum_probs=37.6
Q ss_pred HHHHHHHHHhC-CCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 305 AGLLGTVRAQG-LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 305 Agll~A~r~~g-~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.|++.+++..+ ..+.. .+++|+|||.+|.++|..+.. .|. ++|+++|+.
T Consensus 125 ~G~~~~l~~~~~~~l~~---~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~ 174 (297)
T 2egg_A 125 LGYVQALEEEMNITLDG---KRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT 174 (297)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS
T ss_pred HHHHHHHHHhCCCCCCC---CEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 67888888776 66666 999999999888888776654 354 478888874
No 52
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.70 E-value=0.31 Score=46.40 Aligned_cols=48 Identities=29% Similarity=0.527 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.|++.+++..|..++. .+++|+|+|.+|.++|..+... |. +++++|+.
T Consensus 114 ~G~~~~l~~~~~~~~~---~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~ 161 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKE---KSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT 161 (275)
T ss_dssp HHHHHHHHHHCTTGGG---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC
Confidence 4788888887877777 9999999999999998887653 42 68888874
No 53
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=90.55 E-value=6 Score=41.18 Aligned_cols=172 Identities=13% Similarity=0.116 Sum_probs=106.8
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCchH--HHHHHHHhh---c--cccccc----------CcchhHHHHHH
Q 013638 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRK---R--FCMFND----------DIQGTAGVALA 305 (439)
Q Consensus 244 ~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~na--f~iL~ryr~---~--~~~FND----------DiQGTaaV~LA 305 (439)
+..|-..|...||..+.+.. |..-|-=+|++..-. --+.+.|++ . .-|+-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 44677788888999886655 888899999987621 124455554 1 122221 11336555566
Q ss_pred HHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCC-Chhh---
Q 013638 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-DPAA--- 381 (439)
Q Consensus 306 gll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L-~~~k--- 381 (439)
++-.+++..|.+++. .||+|.|.|..|...|+++.+. |. +=+-+.|++|-+.+.. .+ ++.+
T Consensus 216 ~~~~~~~~~G~~l~g---~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~-Gi~d~edi~~ 280 (449)
T 1bgv_A 216 YVEAVMKHENDTLVG---KTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE-GITTEEKINY 280 (449)
T ss_dssp HHHHHHHHTTCCSTT---CEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT-CSCSHHHHHH
T ss_pred HHHHHHHHccCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC-cCCCHHHHHH
Confidence 777788888987777 9999999999999999888664 33 2344799999988753 24 2210
Q ss_pred -hcccccc-CCcCCC-----CCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 382 -APFAKDP-GDFMGL-----REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 382 -~~fA~~~-~~~~~~-----~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
..+.... ..|..- ....+-.+ +-.++.|+|+=+.. ++.+|++-++.+.+
T Consensus 281 l~~~k~~~~g~v~~y~~~~~a~~i~~~e-~~~~~~Dil~P~A~-~~~I~~~na~~l~a 336 (449)
T 1bgv_A 281 MLEMRASGRNKVQDYADKFGVQFFPGEK-PWGQKVDIIMPCAT-QNDVDLEQAKKIVA 336 (449)
T ss_dssp HHHHHHHCCCCTHHHHHHHTCEEEETCC-GGGSCCSEEECCSC-TTCBCHHHHHHHHH
T ss_pred HHHHHhccCCChhhcccccCCEEeCchh-hhcCCcceeecccc-ccccchhhHHHHHh
Confidence 0010000 000000 00000011 22568999998775 79999999998864
No 54
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=90.43 E-value=0.75 Score=46.86 Aligned_cols=64 Identities=22% Similarity=0.255 Sum_probs=50.3
Q ss_pred ccccccCc---chhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 013638 289 FCMFNDDI---QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (439)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvD 365 (439)
+.+.|--- +.+|=-+++.+++..|..|..+.. .+|.|+|.|..|-.+|+.+... |+ +++.+|
T Consensus 85 I~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~g---ktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d 149 (381)
T 3oet_A 85 IGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRD---RTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCD 149 (381)
T ss_dssp CEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred EEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCC---CEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEEC
Confidence 55555432 345556899999999999988888 9999999999999999998754 44 688888
Q ss_pred cc
Q 013638 366 KD 367 (439)
Q Consensus 366 s~ 367 (439)
+.
T Consensus 150 ~~ 151 (381)
T 3oet_A 150 PP 151 (381)
T ss_dssp HH
T ss_pred CC
Confidence 63
No 55
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.42 E-value=0.23 Score=47.31 Aligned_cols=49 Identities=27% Similarity=0.394 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.|++.+++..|..++. .+++|+|||.+|.++|..+.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~---~~vlvlGaGg~g~a~a~~L~~-----~G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPN---QHVLILGAGGATKGVLLPLLQ-----AQ-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHTTHHHHHH-----TT-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 46788888887777777 999999999888888777654 34 378888874
No 56
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=90.18 E-value=1 Score=43.96 Aligned_cols=93 Identities=20% Similarity=0.275 Sum_probs=62.5
Q ss_pred HhCCce-EEEEecCCCchHHHHHHHHh-hcccccccCcch---hHHHHHHHHHHHHHHh---------C------CCccC
Q 013638 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQG---TAGVALAGLLGTVRAQ---------G------LSLTD 320 (439)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQG---TaaV~LAgll~A~r~~---------g------~~l~d 320 (439)
...|+. .|+.--.+..|- .+ +..+ ..+++.|----. +|=-+++.+|+..|-. | ..-.+
T Consensus 62 ~~~~~Lk~I~~~~~G~d~i-d~-~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~ 139 (307)
T 1wwk_A 62 ESAPKLKVIARAGVGLDNI-DV-EAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIE 139 (307)
T ss_dssp TTCTTCCEEEESSSCCTTB-CH-HHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCC
T ss_pred hhCCCCeEEEECCcccccc-CH-HHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcc
Confidence 456887 888888777773 22 3333 348777754333 4445788888887731 1 11134
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~ 174 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILLYDPY 174 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 5569999999999999999987653 43 68888874
No 57
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.96 E-value=0.17 Score=43.00 Aligned_cols=32 Identities=34% Similarity=0.605 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
..|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 359999999999999988765 465 58888864
No 58
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.75 E-value=1.7 Score=44.80 Aligned_cols=92 Identities=18% Similarity=0.203 Sum_probs=59.5
Q ss_pred hCCce-EEEEecCCCchHHHHHHHHhh-cccccccCcc---hhHHHHHHHHHHHHHHh---------C---C---CccCC
Q 013638 262 RWPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G---L---SLTDF 321 (439)
Q Consensus 262 ~~P~~-~IqfEDf~~~naf~iL~ryr~-~~~~FNDDiQ---GTaaV~LAgll~A~r~~---------g---~---~l~dl 321 (439)
..|+. .|+.-=.+..| ..+ +..++ -+++||---- .+|=-++|.+++..|-. | + .-.+|
T Consensus 77 ~~p~Lk~I~~~~~G~d~-IDl-~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el 154 (416)
T 3k5p_A 77 AANRLIAVGCFSVGTNQ-VEL-KAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREV 154 (416)
T ss_dssp HCTTCCEEEECSSCCTT-BCH-HHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCS
T ss_pred hCCCcEEEEECccccCc-cCH-HHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccC
Confidence 35665 55554455444 223 33333 4888887533 35556788888887631 1 0 11345
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+.++.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 155 ~gktvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~yd~~ 188 (416)
T 3k5p_A 155 RGKTLGIVGYGNIGSQVGNLAESL-----GM-------TVRYYDTS 188 (416)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECTT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCc
Confidence 669999999999999999987654 44 78889975
No 59
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.64 E-value=0.15 Score=51.26 Aligned_cols=38 Identities=24% Similarity=0.437 Sum_probs=31.8
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
|++.||+++|||..|..+|+.|+.+ |+ ++|.++|.+=+
T Consensus 32 L~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D~V 69 (340)
T 3rui_A 32 IKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGTV 69 (340)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCBC
T ss_pred HhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCCEe
Confidence 3449999999999999999998876 44 69999998643
No 60
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=89.46 E-value=6.7 Score=39.45 Aligned_cols=109 Identities=19% Similarity=0.180 Sum_probs=70.6
Q ss_pred CChhhhhHhHHHHHHHHHHhCCceEEEEecCCCchH--HHHHHHHhhc--cc-cc---ccCcchhHHHHHHHHHHHHHHh
Q 013638 243 LEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWA--FETLERYRKR--FC-MF---NDDIQGTAGVALAGLLGTVRAQ 314 (439)
Q Consensus 243 ~~g~~y~~~vdefv~av~~~~P~~~IqfEDf~~~na--f~iL~ryr~~--~~-~F---NDDiQGTaaV~LAgll~A~r~~ 314 (439)
++..+-++++..|.+++..+.-. -|-=+|++..-. --+.++|+-- -| .+ .|=-.-||-=+.-++-.+++..
T Consensus 90 ~s~~~~e~~~r~~~~~~~~l~g~-~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 90 IDPSTWARILRIHAENIDKLSGN-YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTS-EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cChhhHHHHHHHHHHHHHHhcCC-cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 34455667888888888887522 578889976431 1234444311 01 11 1111235555566777788888
Q ss_pred CC-CccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 315 GL-SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 315 g~-~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
|. .|+. .+++|.|.|..|..+|+.+... |. ++++.|++
T Consensus 169 G~~~L~G---ktV~I~G~GnVG~~~A~~l~~~-----Ga-------kVvvsD~~ 207 (355)
T 1c1d_A 169 GLGSLDG---LTVLVQGLGAVGGSLASLAAEA-----GA-------QLLVADTD 207 (355)
T ss_dssp TCCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCCCCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 86 6777 9999999999999999877543 53 67788874
No 61
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.33 E-value=0.33 Score=47.68 Aligned_cols=37 Identities=24% Similarity=0.422 Sum_probs=31.5
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
|++.||+|+|||..|..+|..|+.+.+ .+|.++|.+=
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGV-----------G~i~lvD~D~ 70 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGI-----------GKLLLFDYDK 70 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCCB
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCC-----------CEEEEECCCc
Confidence 344999999999999999999988744 6999999864
No 62
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.13 E-value=0.29 Score=49.01 Aligned_cols=91 Identities=20% Similarity=0.242 Sum_probs=55.4
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCC
Q 013638 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (439)
Q Consensus 320 dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~s 399 (439)
++.+.+++|+|+|..|..+|+.+... |. +++.+|++.- .+...+..+..... .. .....+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~~------~l~~~~~~~g~~~~-~~-~~~~~~ 224 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINID------KLRQLDAEFCGRIH-TR-YSSAYE 224 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCHH------HHHHHHHHTTTSSE-EE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCHH------HHHHHHHhcCCeeE-ec-cCCHHH
Confidence 45569999999999999998877653 43 6888887411 01111111111000 00 001124
Q ss_pred HHHHhccCCCcEEEeccCCC-----CCCCHHHHHHHhc
Q 013638 400 LLEVVRKVKPHVLLGLSGVG-----GVFNEEVKTYFLC 432 (439)
Q Consensus 400 L~eaV~~vkPtvLIG~S~~~-----G~FteevV~~Ma~ 432 (439)
+.+.++. .|++|.+...| .+++++.++.|.+
T Consensus 225 l~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk~ 260 (377)
T 2vhw_A 225 LEGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMKP 260 (377)
T ss_dssp HHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSCT
T ss_pred HHHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCCC
Confidence 7788876 89999876544 4578998888864
No 63
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=87.78 E-value=2.7 Score=42.77 Aligned_cols=92 Identities=18% Similarity=0.234 Sum_probs=59.5
Q ss_pred hCCce-EEEEecCCCchHHHHHHHHhh-cccccccCcc---hhHHHHHHHHHHHHHHh---------CC------CccCC
Q 013638 262 RWPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL------SLTDF 321 (439)
Q Consensus 262 ~~P~~-~IqfEDf~~~naf~iL~ryr~-~~~~FNDDiQ---GTaaV~LAgll~A~r~~---------g~------~l~dl 321 (439)
..|+. .|+.-=.+..|- . ++..++ -++|||---- .+|=-++|.+|+..|-. |. .-.+|
T Consensus 66 ~~~~Lk~I~~~~~G~d~i-D-~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el 143 (404)
T 1sc6_A 66 AAEKLVAIGAFAIGTNQV-D-LDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEA 143 (404)
T ss_dssp HCSSCCEEEECSSCCTTB-C-HHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCS
T ss_pred hCCCCcEEEECCcccCcc-C-HHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCcccc
Confidence 35665 565555555542 1 223333 4888886543 44555788898888731 10 11345
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+.++.|+|-|..|..+|+.+... |+ +++.+|+.
T Consensus 144 ~gktlGiIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 177 (404)
T 1sc6_A 144 RGKKLGIIGYGHIGTQLGILAESL-----GM-------YVYFYDIE 177 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 569999999999999999987654 43 68888874
No 64
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.77 E-value=0.5 Score=45.39 Aligned_cols=90 Identities=12% Similarity=0.156 Sum_probs=56.5
Q ss_pred HHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCc
Q 013638 312 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 391 (439)
Q Consensus 312 r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~ 391 (439)
+..+..+.. .+++|+|+|..|..+|+.+... |. +++.+|+.- .+ +...+..-++..
T Consensus 149 ~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~--~~~~~~~g~~~~--- 204 (300)
T 2rir_A 149 QHTDYTIHG---SQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH--LARITEMGLVPF--- 204 (300)
T ss_dssp HTCSSCSTT---SEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH--HHHHHHTTCEEE---
T ss_pred HhcCCCCCC---CEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH--HHHHHHCCCeEE---
Confidence 345666666 9999999999999999887643 43 688888742 00 000000000000
Q ss_pred CCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc
Q 013638 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC 432 (439)
Q Consensus 392 ~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~ 432 (439)
...++.|+++. .|++|-... .+.++++.++.|.+
T Consensus 205 ----~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk~ 238 (300)
T 2rir_A 205 ----HTDELKEHVKD--IDICINTIP-SMILNQTVLSSMTP 238 (300)
T ss_dssp ----EGGGHHHHSTT--CSEEEECCS-SCCBCHHHHTTSCT
T ss_pred ----chhhHHHHhhC--CCEEEECCC-hhhhCHHHHHhCCC
Confidence 01357787776 888887654 57888887776653
No 65
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.70 E-value=0.27 Score=46.50 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=29.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|+|..|..+|+.|+.+ |+ ++|.++|.+-
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 8999999999999999998776 44 5899999974
No 66
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=87.54 E-value=0.74 Score=46.45 Aligned_cols=100 Identities=15% Similarity=0.141 Sum_probs=63.3
Q ss_pred hHhHHHHHHHHHHhCCceEEEEecCCCchHHHHHHHHhhccccc-ccC---------cchhHHHHHHHHHHHHHHh-CC-
Q 013638 249 LSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMF-NDD---------IQGTAGVALAGLLGTVRAQ-GL- 316 (439)
Q Consensus 249 ~~~vdefv~av~~~~P~~~IqfEDf~~~naf~iL~ryr~~~~~F-NDD---------iQGTaaV~LAgll~A~r~~-g~- 316 (439)
++++..|.+++..+.-. -|-=+|++..- +.+...-+++.++ --- ---||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~-~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~~ 169 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR-YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSD 169 (364)
T ss_dssp HHHHHHHHHHHHTTTTS-EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHhcCc-eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhcccc
Confidence 45677777777777622 56777887543 3555555555221 111 1234444444555556653 64
Q ss_pred CccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 317 ~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
+|+. .+|+|.|+|..|..+|+.+... |. ++++.|+
T Consensus 170 ~L~G---ktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~ 204 (364)
T 1leh_A 170 SLEG---LAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDV 204 (364)
T ss_dssp CCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred CCCc---CEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcC
Confidence 5666 9999999999999999988654 43 5778885
No 67
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=87.50 E-value=2.5 Score=42.37 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=62.2
Q ss_pred HhCCce-EEEEecCCCchH-HHHHHHHhhcccccccCc---chhHHHHHHHHHHHHHHh---------C--------CCc
Q 013638 261 ARWPKA-IVQFEDFQMKWA-FETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G--------LSL 318 (439)
Q Consensus 261 ~~~P~~-~IqfEDf~~~na-f~iL~ryr~~~~~FNDDi---QGTaaV~LAgll~A~r~~---------g--------~~l 318 (439)
...|+. .|+.--.+..|- ..-+.+.+..+.+.|--- ..+|=-+++.+|+..|-. | ..-
T Consensus 80 ~~~~~Lk~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~ 159 (364)
T 2j6i_A 80 DKAKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDA 159 (364)
T ss_dssp HHCTTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTC
T ss_pred hhCCCCeEEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCc
Confidence 456887 889888888774 223333222577776432 334555788888887621 0 011
Q ss_pred cCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 319 ~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|.+.+|.|+|.|..|..+|+.+... |+ ++++.+|+.
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~-----G~------~~V~~~d~~ 197 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPF-----NP------KELLYYDYQ 197 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGG-----CC------SEEEEECSS
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhC-----CC------cEEEEECCC
Confidence 245559999999999999999987643 43 238888864
No 68
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=87.24 E-value=2 Score=45.42 Aligned_cols=119 Identities=18% Similarity=0.237 Sum_probs=80.0
Q ss_pred CCChhhhhHhHHHHHHHHHH-hC--CceEEEEecCCCchH--HHHHHHHhhccc---------ccccCc---------ch
Q 013638 242 RLEGEEYLSIVDEFMEAVHA-RW--PKAIVQFEDFQMKWA--FETLERYRKRFC---------MFNDDI---------QG 298 (439)
Q Consensus 242 R~~g~~y~~~vdefv~av~~-~~--P~~~IqfEDf~~~na--f~iL~ryr~~~~---------~FNDDi---------QG 298 (439)
..+..|-..|...||+.+.+ .+ |..-|-=+|++..-. --+.+.|+...- +--.-+ .-
T Consensus 135 ~~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 135 NYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 34667888999999999985 24 888888999987532 237788874321 111111 22
Q ss_pred hHHHHHHHHHH------HHHHhCCC--ccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 299 TAGVALAGLLG------TVRAQGLS--LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 299 TaaV~LAgll~------A~r~~g~~--l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
||-=+.-++-+ +++..|.+ |+. .||+|-|.|..|...|+.+.+. |. +-+-+.|++|-|
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g---~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~i 280 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGD---KTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSI 280 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEE
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceE
Confidence 44333333333 34456753 556 9999999999999999988763 43 345689999999
Q ss_pred ccCC
Q 013638 371 TKER 374 (439)
Q Consensus 371 ~~~r 374 (439)
.+..
T Consensus 281 yd~~ 284 (501)
T 3mw9_A 281 WNPD 284 (501)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 8754
No 69
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.12 E-value=0.25 Score=46.81 Aligned_cols=101 Identities=16% Similarity=0.295 Sum_probs=57.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccccc--CCC------CCChhhhccc----cccCC-
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITK--ERK------NLDPAAAPFA----KDPGD- 390 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~--~r~------~L~~~k~~fA----~~~~~- 390 (439)
.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+=+=.. .|. ++-..|..-+ +..++
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 97 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD 97 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred CcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC
Confidence 8999999999999999888765 54 58999998743211 121 1111121111 00010
Q ss_pred --cCCCCC---CCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhccCCCCCC
Q 013638 391 --FMGLRE---GASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLCFIPCFIF 439 (439)
Q Consensus 391 --~~~~~~---~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~~~~~pi~ 439 (439)
+..... ..++.+.++. .|++|.++. ..-++..+...+....+|+|
T Consensus 98 ~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d--~~~~r~~l~~~~~~~~~p~i 147 (251)
T 1zud_1 98 IQLTALQQRLTGEALKDAVAR--ADVVLDCTD--NMATRQEINAACVALNTPLI 147 (251)
T ss_dssp SEEEEECSCCCHHHHHHHHHH--CSEEEECCS--SHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEEeccCCHHHHHHHHhc--CCEEEECCC--CHHHHHHHHHHHHHhCCCEE
Confidence 000000 1235667776 899997654 33355666666666667753
No 70
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=87.12 E-value=1.2 Score=45.79 Aligned_cols=71 Identities=15% Similarity=0.299 Sum_probs=47.5
Q ss_pred CceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHH
Q 013638 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (439)
Q Consensus 323 ~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ 401 (439)
..|++|+|| |-+|.|.++.+... |..+ .++..+|.+= ..+ . ..+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~~----~~V~v~D~~~---~~~------------g----------~~~- 258 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIPD----ANILKWDIKE---TSR------------G----------GPF- 258 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCCG----GGEEEECHHH---HTT------------C----------SCC-
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCCc----CceEEeeccc---ccc------------C----------Cch-
Confidence 368999999 99999998887653 4321 1466666531 000 0 001
Q ss_pred HHhccCCCcEEEeccCC----CCCCCHHHHHHH
Q 013638 402 EVVRKVKPHVLLGLSGV----GGVFNEEVKTYF 430 (439)
Q Consensus 402 eaV~~vkPtvLIG~S~~----~G~FteevV~~M 430 (439)
+.++. .|++||+--. |-++|+|+|+.|
T Consensus 259 ~~i~~--aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 259 DEIPQ--ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp THHHH--SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred hhHhh--CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 23444 8999997654 789999999999
No 71
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=86.63 E-value=0.39 Score=48.00 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=58.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC--CC------CCChhhhcccc----ccCC-
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE--RK------NLDPAAAPFAK----DPGD- 390 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~--r~------~L~~~k~~fA~----~~~~- 390 (439)
.||+|+|+|..|..+|..|+.+.+ ++|.++|.+=+=..+ |. ++-..|..-+. ..++
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGv-----------g~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 187 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGI-----------GEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE 187 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-----------CeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC
Confidence 899999999999999999887644 689999986432111 11 11111211111 1111
Q ss_pred --cCCCC---CCCC-HHHHhccCCCcEEEeccCCCCCC-CHHHHHHHhccCCCCCC
Q 013638 391 --FMGLR---EGAS-LLEVVRKVKPHVLLGLSGVGGVF-NEEVKTYFLCFIPCFIF 439 (439)
Q Consensus 391 --~~~~~---~~~s-L~eaV~~vkPtvLIG~S~~~G~F-teevV~~Ma~~~~~pi~ 439 (439)
+.... ...+ +.+ ++. .|++|-++- ..- +..++...+....+|+|
T Consensus 188 v~v~~~~~~i~~~~~~~~-~~~--~DlVvd~~D--n~~~~r~~ln~~c~~~~~p~i 238 (353)
T 3h5n_A 188 ISVSEIALNINDYTDLHK-VPE--ADIWVVSAD--HPFNLINWVNKYCVRANQPYI 238 (353)
T ss_dssp SEEEEEECCCCSGGGGGG-SCC--CSEEEECCC--CSTTHHHHHHHHHHHTTCCEE
T ss_pred CeEEEeecccCchhhhhH-hcc--CCEEEEecC--ChHHHHHHHHHHHHHhCCCEE
Confidence 00000 0112 555 655 899887653 333 67778788877777764
No 72
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=86.08 E-value=1.2 Score=44.15 Aligned_cols=131 Identities=13% Similarity=0.189 Sum_probs=86.3
Q ss_pred HHHHHHHHHhC--Cce---EEEEecCCCchHHHHHHHHhh--ccccccc--------CcchhHHHHHHHHHHHHHHhCCC
Q 013638 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYRK--RFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (439)
Q Consensus 253 defv~av~~~~--P~~---~IqfEDf~~~naf~iL~ryr~--~~~~FND--------DiQGTaaV~LAgll~A~r~~g~~ 317 (439)
+|+++.+.+.- |++ ++|+==.+.-+..++++.-.- .+=.||. ...+-.-+|-.|++--++..+.+
T Consensus 97 ~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g~~~~~PcTp~gv~~lL~~~~i~ 176 (303)
T 4b4u_A 97 EQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMGEAAYGSATPAGIMTILKENNIE 176 (303)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTTCCCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHHHhcCCCCcccCccHHHHHHHHHHHCCC
Confidence 56666666654 543 666544444455555544322 1211110 12233456778999999999998
Q ss_pred ccCCCCceEEEeCch-hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCC
Q 013638 318 LTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (439)
Q Consensus 318 l~dl~~~riv~~GAG-sAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~ 396 (439)
++- .++|++|.+ -.|.-+|.++.. +|. .+.+|.|+
T Consensus 177 l~G---k~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~----------------------------- 212 (303)
T 4b4u_A 177 IAG---KHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR----------------------------- 212 (303)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-----------------------------
T ss_pred CCC---CEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-----------------------------
Confidence 887 999999975 568888877654 232 35544331
Q ss_pred CCCHHHHhccCCCcEEEeccCCCCCCCHHHHHH
Q 013638 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTY 429 (439)
Q Consensus 397 ~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~ 429 (439)
..+|.+.++. +|++|...+.|+.++.|||+.
T Consensus 213 T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk~ 243 (303)
T 4b4u_A 213 TQNLPELVKQ--ADIIVGAVGKAELIQKDWIKQ 243 (303)
T ss_dssp CSSHHHHHHT--CSEEEECSCSTTCBCGGGSCT
T ss_pred CCCHHHHhhc--CCeEEeccCCCCccccccccC
Confidence 2458999998 999999999999999999874
No 73
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.99 E-value=0.69 Score=44.55 Aligned_cols=48 Identities=17% Similarity=0.336 Sum_probs=34.5
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.|+..+++..|.. .. .+++|+|||.||-+++..+.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~---~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KN---AKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TT---SCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4466666655543 34 799999999999999877654 354 478888873
No 74
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=85.85 E-value=0.73 Score=44.05 Aligned_cols=49 Identities=18% Similarity=0.218 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 303 ~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
...|++.+++..+.+++. .+++|+|||.+|.++|..+.. .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~---k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKD---KNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCS---CEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678899999888877777 999999998666666555433 33 57777764
No 75
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=85.81 E-value=4 Score=42.13 Aligned_cols=116 Identities=14% Similarity=0.121 Sum_probs=82.7
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCchHH---HHHHHHhhc-----ccccccC----------cchhHHHH
Q 013638 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAF---ETLERYRKR-----FCMFNDD----------IQGTAGVA 303 (439)
Q Consensus 243 ~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~naf---~iL~ryr~~-----~~~FNDD----------iQGTaaV~ 303 (439)
.+.+|-..|...|+.++...- |..-|-=+|++.. +. -+.+.|+.. ..++.-+ -.-||-=+
T Consensus 115 ~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv 193 (421)
T 1v9l_A 115 LSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGV 193 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHH
Confidence 345677888999999999887 8888899999973 22 244666432 1223222 12355555
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEE-EEecccccccCC
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKER 374 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~-lvDs~GLl~~~r 374 (439)
.-++-.+++..|.+++. .+|+|.|.|..|...|+++.+ .|. +++ +.|++|-+.+..
T Consensus 194 ~~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~ 250 (421)
T 1v9l_A 194 AVATREMAKKLWGGIEG---KTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKE 250 (421)
T ss_dssp HHHHHHHHHHHHSCCTT---CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCC
Confidence 55677778888888777 999999999999999987755 343 555 999999988754
No 76
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=85.47 E-value=0.59 Score=45.66 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=27.7
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.||||+|||.||+..|..|... |-+ -+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~~-----~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DPS-----IEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----CcC-----CeEEEEeCC
Confidence 47999999999999999988654 221 278889875
No 77
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=85.38 E-value=0.37 Score=52.12 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=30.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.||+|+|||..|..+|+.|+.+++ ++|.++|.+=+
T Consensus 327 arVLIVGaGGLGs~vA~~La~aGV-----------G~ItLvD~D~V 361 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNGTV 361 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCCBC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEcCCCC
Confidence 999999999999999999888644 69999998753
No 78
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=85.34 E-value=2 Score=42.55 Aligned_cols=67 Identities=21% Similarity=0.292 Sum_probs=43.4
Q ss_pred ccccccCcc---hhHHHHHHHHHHHHHHh---------C----CC---ccCCCCceEEEeCchhHHHHHHHHHHHHHHHH
Q 013638 289 FCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G----LS---LTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (439)
Q Consensus 289 ~~~FNDDiQ---GTaaV~LAgll~A~r~~---------g----~~---l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~ 349 (439)
+.+.|---- .+|=-+++-+|+..|-. | .. -.+|.+.+|.|+|+|..|..+|+.+...
T Consensus 111 I~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~---- 186 (333)
T 3ba1_A 111 VRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEAF---- 186 (333)
T ss_dssp CEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred cEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHHC----
Confidence 555554332 34444677777776531 1 00 1245559999999999999999987643
Q ss_pred cCCChhhhcCeEEEEecc
Q 013638 350 AGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 350 ~Gls~eeA~~~i~lvDs~ 367 (439)
|+ +++.+|+.
T Consensus 187 -G~-------~V~~~dr~ 196 (333)
T 3ba1_A 187 -DC-------PISYFSRS 196 (333)
T ss_dssp -TC-------CEEEECSS
T ss_pred -CC-------EEEEECCC
Confidence 43 58888875
No 79
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=85.21 E-value=0.43 Score=47.08 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=57.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC-CCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~-r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||.|+|||+.|.++|..+... |+- +++++|.+-=..+. ..++.+...++..+. .. ....++.|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~~------~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~-~i---~~t~d~~e 74 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----ELA------DVVLYDVVKGMPEGKALDLSHVTSVVDTNV-SV---RAEYSYEA 74 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSSSHHHHHHHHHHHHHHHTTCCC-CE---EEECSHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEECChhHHHHHHHHHHhhhhccCCCC-EE---EEeCCHHH
Confidence 5899999999999999888763 441 49999985210000 011111111111110 00 11257988
Q ss_pred HhccCCCcEEEeccCCC---CC----------------CCHHHHHHHhccCCCC
Q 013638 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVKTYFLCFIPCF 437 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~---G~----------------FteevV~~Ma~~~~~p 437 (439)
++++ +|++|=+.+.| |. +-+++.+.|.++++.-
T Consensus 75 a~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a 126 (331)
T 1pzg_A 75 ALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKT 126 (331)
T ss_dssp HHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 9998 99998655433 33 2477888888888654
No 80
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=85.17 E-value=0.48 Score=47.18 Aligned_cols=34 Identities=21% Similarity=0.399 Sum_probs=29.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+++|+|..|.-||+.|+.+.+ ++|.++|.+=
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gv-----------g~itlvD~d~ 70 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGV-----------KGLTMLDHEQ 70 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEECCC
Confidence 899999999999999999988744 6999999763
No 81
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=84.94 E-value=0.52 Score=44.97 Aligned_cols=79 Identities=27% Similarity=0.410 Sum_probs=49.6
Q ss_pred HHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccc
Q 013638 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA 385 (439)
Q Consensus 306 gll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA 385 (439)
|++.+++.. ++.+ +++|+|||.+|.+++..+.. .|. ++|+++|+. .++ -+.++
T Consensus 97 G~~~~l~~~-----~~~~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~k------a~~la 149 (253)
T 3u62_A 97 GVVKSLEGV-----EVKE-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IER------AKALD 149 (253)
T ss_dssp HHHHHTTTC-----CCCS-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHH------HHTCC
T ss_pred HHHHHHHhc-----CCCC-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHH------HHHHH
Confidence 577777543 3566 99999999999888777655 354 479999884 111 11222
Q ss_pred cccCCcCCCCCCCCHHHHhccCCCcEEEeccC
Q 013638 386 KDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (439)
Q Consensus 386 ~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~ 417 (439)
+.-... ...++.++++. +|++|-++.
T Consensus 150 ~~~~~~----~~~~~~~~~~~--aDiVInatp 175 (253)
T 3u62_A 150 FPVKIF----SLDQLDEVVKK--AKSLFNTTS 175 (253)
T ss_dssp SSCEEE----EGGGHHHHHHT--CSEEEECSS
T ss_pred HHcccC----CHHHHHhhhcC--CCEEEECCC
Confidence 211000 11347788887 899996554
No 82
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=84.85 E-value=2.8 Score=40.84 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=30.9
Q ss_pred cCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 319 ~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~ 155 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSS 155 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSC
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEeccc
Confidence 456669999999999999999998765 43 688888753
No 83
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=84.84 E-value=0.35 Score=52.15 Aligned_cols=36 Identities=25% Similarity=0.435 Sum_probs=30.5
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
++.||+|+|||..|..+|..|+.+ |+ ++|.++|.+=
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D~ 361 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 361 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCSB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCCc
Confidence 339999999999999999998876 44 6999999763
No 84
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=84.44 E-value=0.3 Score=50.53 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHhCCceEEEEecCCCchHHHHHHHHhhc-cccc--ccCcchhHHHHHHHHHHHHHHhCC-----CccCCC
Q 013638 251 IVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKR-FCMF--NDDIQGTAGVALAGLLGTVRAQGL-----SLTDFA 322 (439)
Q Consensus 251 ~vdefv~av~~~~P~~~IqfEDf~~~naf~iL~ryr~~-~~~F--NDDiQGTaaV~LAgll~A~r~~g~-----~l~dl~ 322 (439)
.+..+++.+...+|++-+.--|. ....++-++|.-. +|++ |+..-+.++....-+...+..... ++.+-.
T Consensus 134 ~~~~~l~~~a~~~~~v~~~~vd~--~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 134 DVVQALNLMAVLNPRIKHTAIDG--GTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEET--TTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHHhHcCceEEEEEec--hhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 35556666666778643333344 3445677888654 6644 666667777776777765432210 111111
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
..+|+|+|||.||+..|..+.. .|+ ++.++|++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 2689999999999999988654 354 57777753
No 85
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=83.69 E-value=3.6 Score=40.45 Aligned_cols=93 Identities=23% Similarity=0.205 Sum_probs=61.8
Q ss_pred HhCCce-EEEEecCCCchHHHHHHHHh-hcccccccCcch---hHHHHHHHHHHHHHHh-----------------CC-C
Q 013638 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQG---TAGVALAGLLGTVRAQ-----------------GL-S 317 (439)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQG---TaaV~LAgll~A~r~~-----------------g~-~ 317 (439)
...|+. .|+.--.+..|- . ++..+ ..+++.|----. +|=-+++.+|+..|-. +. +
T Consensus 63 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~ 140 (334)
T 2dbq_A 63 ENAPKLRIVANYAVGYDNI-D-IEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP 140 (334)
T ss_dssp HTCTTCCEEEESSSCCTTB-C-HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCT
T ss_pred hhCCCceEEEECCcccccc-c-HHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccccccc
Confidence 456887 888777776662 2 23333 348888864433 3444788888887732 10 0
Q ss_pred ----ccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 318 ----LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 318 ----l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.+|.+.+|.|+|+|..|..+|+.+... |. +++.+|+.
T Consensus 141 ~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~-----G~-------~V~~~d~~ 182 (334)
T 2dbq_A 141 KWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGF-----NM-------RILYYSRT 182 (334)
T ss_dssp TTTCCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred ccccccCCCCCEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEECCC
Confidence 1345669999999999999999987653 43 68888874
No 86
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=83.66 E-value=2.2 Score=42.61 Aligned_cols=69 Identities=14% Similarity=0.193 Sum_probs=46.6
Q ss_pred cccccccCc---chhHHHHHHHHHHHHHHh---------CC---------CccCCCCceEEEeCchhHHHHHHHHHHHHH
Q 013638 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAA 346 (439)
Q Consensus 288 ~~~~FNDDi---QGTaaV~LAgll~A~r~~---------g~---------~l~dl~~~riv~~GAGsAgiGiA~li~~~~ 346 (439)
.+++.|--- +.+|=-+++-+|+..|-. |. .-.+|.+.+|.|+|.|..|-.+|+.+...
T Consensus 117 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~- 195 (345)
T 4g2n_A 117 GIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF- 195 (345)
T ss_dssp TCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT-
T ss_pred CEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC-
Confidence 366666432 335556788888877632 10 01345569999999999999999988653
Q ss_pred HHHcCCChhhhcCeEEEEeccc
Q 013638 347 ARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 347 ~~~~Gls~eeA~~~i~lvDs~G 368 (439)
|+ +++.+|+..
T Consensus 196 ----G~-------~V~~~dr~~ 206 (345)
T 4g2n_A 196 ----GL-------AIHYHNRTR 206 (345)
T ss_dssp ----TC-------EEEEECSSC
T ss_pred ----CC-------EEEEECCCC
Confidence 43 688888753
No 87
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=83.31 E-value=2.6 Score=42.21 Aligned_cols=93 Identities=16% Similarity=0.117 Sum_probs=55.9
Q ss_pred hCCce-EEEEecCCCchHHHHHHHHhhcccccccCc---chhHHHHHHHHHHHHHHh---------C--------CCccC
Q 013638 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G--------LSLTD 320 (439)
Q Consensus 262 ~~P~~-~IqfEDf~~~naf~iL~ryr~~~~~FNDDi---QGTaaV~LAgll~A~r~~---------g--------~~l~d 320 (439)
..|+. .|+.-=.+..|- .+-.--+..+.+.|--- ..+|=-+++-+|+..|-. | ..-.+
T Consensus 83 ~~p~Lk~i~~~g~G~d~i-d~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~ 161 (351)
T 3jtm_A 83 KAKNLKLLLTAGIGSDHI-DLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYD 161 (351)
T ss_dssp HCSSCCEEEESSSCCTTB-CHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCC
T ss_pred hCCCCeEEEEeCeeeccc-CHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCccc
Confidence 35765 666655555442 22111223366665322 234555788888877621 1 11123
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~ 196 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPF-----GC-------NLLYHDRL 196 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG-----CC-------EEEEECSS
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHC-----CC-------EEEEeCCC
Confidence 4459999999999999999987653 44 58888875
No 88
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=83.21 E-value=2.1 Score=42.00 Aligned_cols=90 Identities=17% Similarity=0.192 Sum_probs=61.6
Q ss_pred Cce-EEEEecCCCchHHHHHHHHh-hcccccccCcc---hhHHHHHHHHHHHHHHh---------CC-----C----ccC
Q 013638 264 PKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL-----S----LTD 320 (439)
Q Consensus 264 P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQ---GTaaV~LAgll~A~r~~---------g~-----~----l~d 320 (439)
|+. .|+.--.+..|- . ++..+ ..+++.|---- .+|=-+++.+|+..|-. |. + -.+
T Consensus 75 ~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~ 152 (330)
T 2gcg_A 75 ANLKVISTMSVGIDHL-A-LDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYG 152 (330)
T ss_dssp TTCCEEEESSSCCTTB-C-HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCC
T ss_pred CCceEEEECCcccccc-c-HHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcC
Confidence 777 888888887773 2 33333 34888886433 34445788899887732 11 0 135
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
|.+.+|.|+|+|..|..+|+.+.. .|. +++.+|+.
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~ 187 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGR 187 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGG-----GTC-------CEEEEESS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEECCC
Confidence 666999999999999999998754 343 58888864
No 89
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=83.10 E-value=2.4 Score=38.95 Aligned_cols=36 Identities=17% Similarity=0.259 Sum_probs=26.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+... |... ..+++++|+.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~-----g~~~---~~~v~~~~~~ 40 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA-----NIIK---KENLFYYGPS 40 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-----TSSC---GGGEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CCCC---CCeEEEEeCC
Confidence 6899999999999999988664 4200 0268888874
No 90
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=83.00 E-value=1.6 Score=43.35 Aligned_cols=58 Identities=17% Similarity=0.332 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHHHHHh---------C----CCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 013638 299 TAGVALAGLLGTVRAQ---------G----LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (439)
Q Consensus 299 TaaV~LAgll~A~r~~---------g----~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvD 365 (439)
+|=-+++.+|+..|-. | .+..+|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3444677777766521 1 122345559999999999999999998654 44 688888
Q ss_pred ccc
Q 013638 366 KDG 368 (439)
Q Consensus 366 s~G 368 (439)
+..
T Consensus 171 r~~ 173 (324)
T 3hg7_A 171 RSG 173 (324)
T ss_dssp SSC
T ss_pred CCh
Confidence 865
No 91
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=82.95 E-value=1.4 Score=41.36 Aligned_cols=47 Identities=28% Similarity=0.508 Sum_probs=35.8
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.|++.+++..+. ++++ +++|+|+|.+|..+|..+.. .|. +++++|++
T Consensus 102 ~g~~~~l~~~~~---~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~ 148 (263)
T 2d5c_A 102 PGFLEALKAGGI---PLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT 148 (263)
T ss_dssp HHHHHHHHHTTC---CCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred HHHHHHHHHhCC---CCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 478888887665 4566 99999999999999887654 342 58888875
No 92
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=81.90 E-value=8.9 Score=39.33 Aligned_cols=168 Identities=19% Similarity=0.225 Sum_probs=101.5
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CceEEEEecCCCchHHH---HHHHHhhc---c-c---ccccC----------cchhHH
Q 013638 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAFE---TLERYRKR---F-C---MFNDD----------IQGTAG 301 (439)
Q Consensus 243 ~~g~~y~~~vdefv~av~~~~-P~~~IqfEDf~~~naf~---iL~ryr~~---~-~---~FNDD----------iQGTaa 301 (439)
.+.+|-..|...|+.++...- |..-|-=+|++.. +.. +.+.|.+. . + ++--+ -.-||-
T Consensus 114 ~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~ 192 (419)
T 1gtm_A 114 LSDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATAR 192 (419)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhh
Confidence 345677888999999998877 8888888999874 222 34555432 1 2 33322 123665
Q ss_pred HHHHHHHHHHHHhCCC-ccCCCCceEEEeCchhHHHHHHHHHHH-HHHHHcCCChhhhcCeEEEE-ecccccccCCC-CC
Q 013638 302 VALAGLLGTVRAQGLS-LTDFADQKIVVVGAGSAGLGVLKMAVQ-AAARMAGNNDAFARNKFFLL-DKDGLITKERK-NL 377 (439)
Q Consensus 302 V~LAgll~A~r~~g~~-l~dl~~~riv~~GAGsAgiGiA~li~~-~~~~~~Gls~eeA~~~i~lv-Ds~GLl~~~r~-~L 377 (439)
=+.-++..+++..|.+ |+. .++.|+|.|..|..+|+++.. . |+ +++.+ |+.|-+..... ++
T Consensus 193 Gv~~~~~~~~~~~G~~~l~g---ktvgI~G~G~VG~~vA~~l~~~~-----G~-------kVv~~sD~~g~~~~~~gvdl 257 (419)
T 1gtm_A 193 GASYTIREAAKVLGWDTLKG---KTIAIQGYGNAGYYLAKIMSEDF-----GM-------KVVAVSDSKGGIYNPDGLNA 257 (419)
T ss_dssp HHHHHHHHHHHHTTCSCSTT---CEEEEECCSHHHHHHHHHHHHTT-----CC-------EEEEEECSSCEEEEEEEECH
T ss_pred HHHHHHHHHHHHhCCcccCC---CEEEEEcCCHHHHHHHHHHHHhc-----CC-------EEEEEeCCCccccCccCCCH
Confidence 5666777888888987 777 999999999999999998765 3 43 45544 78765433210 11
Q ss_pred Chhhhcccccc---CCcCCCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHH
Q 013638 378 DPAAAPFAKDP---GDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYF 430 (439)
Q Consensus 378 ~~~k~~fA~~~---~~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~M 430 (439)
.+-. .++... .+... ....+ .+.+...|+|+||=++. +++++++-++++
T Consensus 258 ~~L~-~~~d~~~~l~~l~~-t~~i~-~~~l~~mk~dilIn~Ar-G~~Vde~a~~aL 309 (419)
T 1gtm_A 258 DEVL-KWKNEHGSVKDFPG-ATNIT-NEELLELEVDVLAPAAI-EEVITKKNADNI 309 (419)
T ss_dssp HHHH-HHHHHHSSSTTCTT-SEEEC-HHHHHHSCCSEEEECSC-SCCBCTTGGGGC
T ss_pred HHHH-HHHHhcCEeecCcc-CeeeC-HHHHHhCCCCEEEECCC-cccCCHHHHHHh
Confidence 1111 000000 00000 00011 23355678899998775 788888765543
No 93
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=81.70 E-value=2.2 Score=43.09 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHHH---------hCC---------CccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcC
Q 013638 298 GTAGVALAGLLGTVRA---------QGL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARN 359 (439)
Q Consensus 298 GTaaV~LAgll~A~r~---------~g~---------~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~ 359 (439)
.+|=-+++-+|+..|- .|. .-.+|.+.++.|+|.|..|-.+|+.+... |+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~f-----G~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGF-----RA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTS-----CC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhC-----CC-------
Confidence 3455567777777662 122 12456669999999999999999976543 44
Q ss_pred eEEEEecc
Q 013638 360 KFFLLDKD 367 (439)
Q Consensus 360 ~i~lvDs~ 367 (439)
+++.+|+.
T Consensus 201 ~V~~~d~~ 208 (365)
T 4hy3_A 201 RIRVFDPW 208 (365)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 68888864
No 94
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=81.38 E-value=4.1 Score=40.64 Aligned_cols=67 Identities=19% Similarity=0.215 Sum_probs=43.7
Q ss_pred ccccccCc---chhHHHHHHHHHHHHHHh---------C----C-Cc---cCCCCceEEEeCchhHHHHHHHHHHHHHHH
Q 013638 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------G----L-SL---TDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (439)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~A~r~~---------g----~-~l---~dl~~~riv~~GAGsAgiGiA~li~~~~~~ 348 (439)
|++.|--- ..+|=-++|-+|+..|-. | . .. .+|.+.+|.|+|.|..|..+|+.+...
T Consensus 117 I~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~--- 193 (340)
T 4dgs_A 117 IDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAF--- 193 (340)
T ss_dssp CEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTT---
T ss_pred EEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHC---
Confidence 55555322 234555677777777531 1 0 11 356669999999999999999987643
Q ss_pred HcCCChhhhcCeEEEEecc
Q 013638 349 MAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 349 ~~Gls~eeA~~~i~lvDs~ 367 (439)
|+ +++.+|+.
T Consensus 194 --G~-------~V~~~dr~ 203 (340)
T 4dgs_A 194 --GM-------SVRYWNRS 203 (340)
T ss_dssp --TC-------EEEEECSS
T ss_pred --CC-------EEEEEcCC
Confidence 44 68888874
No 95
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=81.21 E-value=0.67 Score=48.28 Aligned_cols=80 Identities=21% Similarity=0.265 Sum_probs=38.8
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCC-Chhhhccccc-cCCcCCCCCCCCHHH
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-DPAAAPFAKD-PGDFMGLREGASLLE 402 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L-~~~k~~fA~~-~~~~~~~~~~~sL~e 402 (439)
||+|+||||.|.. ..|+..+....-++.. -..|+|+|.+- +|-+. ...-+.++.. ..++.- ....++.|
T Consensus 2 KI~iIGaGs~~~t--~~l~~~~~~~~~l~~~--~~ei~L~Di~~----~rl~~~~~~~~~~~~~~~~~~~i-~~t~d~~e 72 (477)
T 3u95_A 2 KISIVGAGSVRFA--LQLVEDIAQTDELSRE--DTHIYLMDVHE----RRLNASYILARKYVEELNSPVKV-VKTESLDE 72 (477)
T ss_dssp EEEEETTTSHHHH--HHHHHHHHTCTTTCST--TCEEEEECSCH----HHHHHHHHHHHHHHHHHTCCCEE-EEESCHHH
T ss_pred EEEEECCCchhhH--HHHHHHHHhhHhcCCC--CCEEEEECCCH----HHHHHHHHHHHHHHHHcCCCeEE-EEeCCHHH
Confidence 8999999997633 2333333211222211 14799999742 22000 0000111111 111110 12467999
Q ss_pred HhccCCCcEEEec
Q 013638 403 VVRKVKPHVLLGL 415 (439)
Q Consensus 403 aV~~vkPtvLIG~ 415 (439)
|+++ +|++|=.
T Consensus 73 Al~g--AD~Vi~~ 83 (477)
T 3u95_A 73 AIEG--ADFIINT 83 (477)
T ss_dssp HHTT--CSEEEEC
T ss_pred HhCC--CCEEEEC
Confidence 9999 9998843
No 96
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=80.97 E-value=6.1 Score=39.39 Aligned_cols=111 Identities=13% Similarity=0.137 Sum_probs=65.3
Q ss_pred ccccccCc---chhHHHHHHHHHHHHHH----------hCC-------CccCCCCceEEEeCchhHHHHHHHHHHHHHHH
Q 013638 289 FCMFNDDI---QGTAGVALAGLLGTVRA----------QGL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (439)
Q Consensus 289 ~~~FNDDi---QGTaaV~LAgll~A~r~----------~g~-------~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~ 348 (439)
+++.|--- +.+|=-+++-+|+..|- .|. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 94 I~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~--- 170 (343)
T 2yq5_A 94 LLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM--- 170 (343)
T ss_dssp CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC---
Confidence 55555422 23455567888877761 231 12345569999999999999999988654
Q ss_pred HcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccC----CCCCCCH
Q 013638 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 424 (439)
Q Consensus 349 ~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~----~~G~Fte 424 (439)
|+ +++.+|+..- + .....+ ...+|.|+++. .|+++=..- ..++|++
T Consensus 171 --G~-------~V~~~d~~~~-----~----~~~~~~----------~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~ 220 (343)
T 2yq5_A 171 --GA-------KVIAYDVAYN-----P----EFEPFL----------TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGE 220 (343)
T ss_dssp --TC-------EEEEECSSCC-----G----GGTTTC----------EECCHHHHHHH--CSEEEECCCCCTTTTTCBCH
T ss_pred --CC-------EEEEECCChh-----h----hhhccc----------cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhH
Confidence 44 6888887531 0 000000 11256676666 666664321 1366677
Q ss_pred HHHHHHhc
Q 013638 425 EVKTYFLC 432 (439)
Q Consensus 425 evV~~Ma~ 432 (439)
+.+..|.+
T Consensus 221 ~~l~~mk~ 228 (343)
T 2yq5_A 221 KQLKEMKK 228 (343)
T ss_dssp HHHHHSCT
T ss_pred HHHhhCCC
Confidence 76666643
No 97
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=80.78 E-value=0.69 Score=47.77 Aligned_cols=34 Identities=32% Similarity=0.532 Sum_probs=29.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+=
T Consensus 41 ~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D~ 74 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 74 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECCB
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCCE
Confidence 8999999999999999998876 54 6899999763
No 98
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=80.69 E-value=2.9 Score=42.08 Aligned_cols=119 Identities=24% Similarity=0.302 Sum_probs=65.2
Q ss_pred hHHHHHHHHhhcccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhh
Q 013638 277 WAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAF 356 (439)
Q Consensus 277 naf~iL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~ee 356 (439)
.++.+-++.+...... .++.+++.+++--+-+..+ ++.. .+|+|+|||..|..+|..+... |.
T Consensus 129 ~a~~~~k~v~~~~~~~----~~~~s~a~~av~~a~~~~~-~l~g---~~VlIiGaG~iG~~~a~~l~~~-----G~---- 191 (404)
T 1gpj_A 129 RAINLGKRAREETRIS----EGAVSIGSAAVELAERELG-SLHD---KTVLVVGAGEMGKTVAKSLVDR-----GV---- 191 (404)
T ss_dssp HHHHHHHHHHHHSSTT----CSCCSHHHHHHHHHHHHHS-CCTT---CEEEEESCCHHHHHHHHHHHHH-----CC----
T ss_pred HHhhhhccCcchhhhc----CCCccHHHHHHHHHHHHhc-cccC---CEEEEEChHHHHHHHHHHHHHC-----CC----
Confidence 3677777766553221 1222233333322222222 3445 8999999999999998887653 54
Q ss_pred hcCeEEEEecccccccCCCCCChhhhccccccC-CcCCCCCCCCHHHHhccCCCcEEEeccCCC-CCCCHHHHHH
Q 013638 357 ARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG-DFMGLREGASLLEVVRKVKPHVLLGLSGVG-GVFNEEVKTY 429 (439)
Q Consensus 357 A~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~-~~~~~~~~~sL~eaV~~vkPtvLIG~S~~~-G~FteevV~~ 429 (439)
++|+++|+.. .+ . ..+|+... .. -...++.++++. +|++|-+++.+ ..++++.++.
T Consensus 192 --~~V~v~~r~~----~r--a----~~la~~~g~~~---~~~~~l~~~l~~--aDvVi~at~~~~~~~~~~~l~~ 249 (404)
T 1gpj_A 192 --RAVLVANRTY----ER--A----VELARDLGGEA---VRFDELVDHLAR--SDVVVSATAAPHPVIHVDDVRE 249 (404)
T ss_dssp --SEEEEECSSH----HH--H----HHHHHHHTCEE---CCGGGHHHHHHT--CSEEEECCSSSSCCBCHHHHHH
T ss_pred --CEEEEEeCCH----HH--H----HHHHHHcCCce---ecHHhHHHHhcC--CCEEEEccCCCCceecHHHHHH
Confidence 4799888731 11 0 12222100 00 011347777765 88888766544 3567777776
No 99
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=80.44 E-value=1.9 Score=44.05 Aligned_cols=97 Identities=13% Similarity=0.291 Sum_probs=57.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChh-hhcCeEEEEeccc-------ccccCCC---CCChhhhccccccCCcC
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDA-FARNKFFLLDKDG-------LITKERK---NLDPAAAPFAKDPGDFM 392 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~e-eA~~~i~lvDs~G-------Ll~~~r~---~L~~~k~~fA~~~~~~~ 392 (439)
.||.|+|||+=|+++|..+.+... +.+.- +-.=++|..|..= .+...+. .|+..+.| .+ .
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~---~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp----~~-i- 105 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCK---GYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP----DN-L- 105 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH---HCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC----SS-E-
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC---CccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC----CC-c-
Confidence 599999999999999999988643 11100 0012467555421 1222221 23333221 00 0
Q ss_pred CCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhccCC
Q 013638 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLCFIP 435 (439)
Q Consensus 393 ~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~~~~ 435 (439)
.-..+|.|+++. +|++|= ++|-.|-+++++.+..+.+
T Consensus 106 --~~t~dl~~al~~--ad~ii~--avPs~~~r~~l~~l~~~~~ 142 (391)
T 4fgw_A 106 --VANPDLIDSVKD--VDIIVF--NIPHQFLPRICSQLKGHVD 142 (391)
T ss_dssp --EEESCHHHHHTT--CSEEEE--CSCGGGHHHHHHHHTTTSC
T ss_pred --EEeCCHHHHHhc--CCEEEE--ECChhhhHHHHHHhccccC
Confidence 123579999998 888763 2366688899999887654
No 100
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=80.28 E-value=0.96 Score=43.29 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=25.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-||+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 589999999999999988765 465 57777754
No 101
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=80.27 E-value=0.96 Score=43.83 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=30.4
Q ss_pred HHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 306 gll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
|++.+++..| . .+++|+|||.||.++|..+.+. | .+|+++++.
T Consensus 108 Gf~~~L~~~~----~---k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt 150 (269)
T 3phh_A 108 GFYLSLKQKN----Y---QNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS 150 (269)
T ss_dssp HHHHHCC-------C---CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHcC----C---CEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 4666665433 5 8999999999988888777653 4 378888874
No 102
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=80.07 E-value=4.5 Score=39.46 Aligned_cols=67 Identities=27% Similarity=0.283 Sum_probs=44.7
Q ss_pred ccccccCcc---hhHHHHHHHHHHHHHHh---------CC---------CccCCCCceEEEeCchhHHHHHHHHHHHHHH
Q 013638 289 FCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (439)
Q Consensus 289 ~~~FNDDiQ---GTaaV~LAgll~A~r~~---------g~---------~l~dl~~~riv~~GAGsAgiGiA~li~~~~~ 347 (439)
+.+.|---- .+|=-+++.+|+..|-. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 89 i~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~-- 166 (311)
T 2cuk_A 89 IRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF-- 166 (311)
T ss_dssp CEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred cEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC--
Confidence 666664322 34445688888876632 10 01345669999999999999999987653
Q ss_pred HHcCCChhhhcCeEEEEecc
Q 013638 348 RMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 348 ~~~Gls~eeA~~~i~lvDs~ 367 (439)
|+ +++.+|+.
T Consensus 167 ---G~-------~V~~~d~~ 176 (311)
T 2cuk_A 167 ---GM-------RVVYHART 176 (311)
T ss_dssp ---TC-------EEEEECSS
T ss_pred ---CC-------EEEEECCC
Confidence 43 68888875
No 103
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=79.76 E-value=4.3 Score=40.08 Aligned_cols=94 Identities=17% Similarity=0.231 Sum_probs=60.2
Q ss_pred HhCCce-EEEEecCCCchHHHHHHHHh-hcccccccCcc---hhHHHHHHHHHHHHHHh----------C----C-CccC
Q 013638 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRAQ----------G----L-SLTD 320 (439)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQ---GTaaV~LAgll~A~r~~----------g----~-~l~d 320 (439)
+..|+. .|+.-=.+..|- . ++..+ ..+++.|---- .+|=-+++.+|+..|-. | . +-.+
T Consensus 57 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~ 134 (324)
T 3evt_A 57 RPTNQLKFVQVISAGVDYL-P-LKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTST 134 (324)
T ss_dssp STTCCCCEEECSSSCCTTS-C-HHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCC
T ss_pred hhCCCceEEEECCcccccc-C-HHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCcc
Confidence 456776 777665555542 2 23333 34777776532 34445677887776521 0 0 1234
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+..
T Consensus 135 l~gktvGIiGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~ 170 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQSLAAKASAL-----GM-------HVIGVNTTG 170 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSC
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhC-----CC-------EEEEECCCc
Confidence 5559999999999999999988654 44 688888753
No 104
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=79.52 E-value=1.1 Score=40.84 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----ARK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCC
Confidence 589999999999999988765 353 69999963
No 105
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=79.48 E-value=2.6 Score=42.05 Aligned_cols=82 Identities=16% Similarity=0.246 Sum_probs=48.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
.||.|+|+|..|..+|..+... |. +++++|+.-- .-..++...- ....++.|+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-----G~-------~V~v~dr~~~----------~~~~l~~~g~-----~~~~s~~e~ 75 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-----GH-------ECVVYDLNVN----------AVQALEREGI-----AGARSIEEF 75 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCHH----------HHHHHHTTTC-----BCCSSHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCCHH----------HHHHHHHCCC-----EEeCCHHHH
Confidence 7999999999999999888764 42 6777776310 0111211110 123467777
Q ss_pred hccC-CCcEEEeccCCCCCCCHHHHHHHhccC
Q 013638 404 VRKV-KPHVLLGLSGVGGVFNEEVKTYFLCFI 434 (439)
Q Consensus 404 V~~v-kPtvLIG~S~~~G~FteevV~~Ma~~~ 434 (439)
++.. +||++|=+- .++ -.+++++.+.++.
T Consensus 76 ~~~a~~~DvVi~~v-p~~-~v~~vl~~l~~~l 105 (358)
T 4e21_A 76 CAKLVKPRVVWLMV-PAA-VVDSMLQRMTPLL 105 (358)
T ss_dssp HHHSCSSCEEEECS-CGG-GHHHHHHHHGGGC
T ss_pred HhcCCCCCEEEEeC-CHH-HHHHHHHHHHhhC
Confidence 7663 457666322 223 6667777666553
No 106
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=79.02 E-value=11 Score=37.20 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=60.3
Q ss_pred HHhCCce-EEEEecCCCchHHHHHHHHhh-cccccccCcch---hHHHHHHHHHHHHHHh---------CC-------Cc
Q 013638 260 HARWPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDIQG---TAGVALAGLLGTVRAQ---------GL-------SL 318 (439)
Q Consensus 260 ~~~~P~~-~IqfEDf~~~naf~iL~ryr~-~~~~FNDDiQG---TaaV~LAgll~A~r~~---------g~-------~l 318 (439)
-+..|+. .|+.-=.+..|- . ++..++ .+.+.|----. +|=-++|.+++..|-. |. .-
T Consensus 59 l~~~p~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~ 136 (334)
T 3kb6_A 59 LSKMPRLKLIHTRSVGFDHI-D-LDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILA 136 (334)
T ss_dssp HHTCTTCCEEEESSSCCTTB-C-HHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCB
T ss_pred HhcCCCCcEEEECCcccchh-c-HHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhcccccccccccccccccccccc
Confidence 3456887 777766666653 1 333333 48888865443 4444577777766521 11 11
Q ss_pred cCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 319 ~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~ 173 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV 173 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred ceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc
Confidence 345559999999999999999887664 33 67777763
No 107
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=78.96 E-value=1.2 Score=42.45 Aligned_cols=34 Identities=29% Similarity=0.588 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.. .|. .++.++|+..
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 689999999999999998754 353 1699999874
No 108
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=78.95 E-value=0.91 Score=42.43 Aligned_cols=33 Identities=27% Similarity=0.564 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 689999999999999988754 354 699999874
No 109
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=78.78 E-value=0.42 Score=47.02 Aligned_cols=96 Identities=17% Similarity=0.135 Sum_probs=55.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC-CCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~-r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||.|+|||+.|.++|.++.. .|+- .++++|.+-=..++ ..++.+...+..... .. ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~-~i---~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIVKNMPHGKALDTSHTNVMAYSNC-KV---SGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTHHHHHTCCC-CE---EEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCHHHHHHHHHHHHhhhhhcCCCc-EE---EECCCH-H
Confidence 589999999999999888765 3542 39999975100000 001111111111110 00 012457 8
Q ss_pred HhccCCCcEEEeccCCC---CC----------------CCHHHHHHHhccCCCC
Q 013638 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVKTYFLCFIPCF 437 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~---G~----------------FteevV~~Ma~~~~~p 437 (439)
+++. +|++|=+.+.| |. +-+++.+.|.++++.-
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a 120 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 120 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTS
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 8888 99998554333 32 3577888888887653
No 110
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=78.63 E-value=4.2 Score=39.61 Aligned_cols=93 Identities=19% Similarity=0.232 Sum_probs=56.2
Q ss_pred hCCce-EEEEecCCCchHHHHHHHHhhccccccc-Ccch--hHHHHHHHHHHHHHHh---------C----C-CccCCCC
Q 013638 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFND-DIQG--TAGVALAGLLGTVRAQ---------G----L-SLTDFAD 323 (439)
Q Consensus 262 ~~P~~-~IqfEDf~~~naf~iL~ryr~~~~~FND-DiQG--TaaV~LAgll~A~r~~---------g----~-~l~dl~~ 323 (439)
..|+. .|+.-=.+..|- .+ +..+..+++.|- +... +|=-+++.+|+..|-. | . +..+|.+
T Consensus 47 ~~~~Lk~I~~~~~G~d~i-d~-~~~~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g 124 (303)
T 1qp8_A 47 KMPRLKFIQVVTAGLDHL-PW-ESIPPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQG 124 (303)
T ss_dssp HCTTCCCEEBSSSCCTTS-CC-TTSCTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTT
T ss_pred hCCCCcEEEECCcCcccc-cH-HHHhcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCC
Confidence 45665 565444443332 11 112234666663 3332 3334788888876632 1 1 2235666
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|.|+|.|..|-.+|+.+... |+ +++.+|+..
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~dr~~ 157 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL-----GA-------QVRGFSRTP 157 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT-----TC-------EEEEECSSC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCc
Confidence 9999999999999999987653 43 688888754
No 111
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=78.16 E-value=1.8 Score=42.29 Aligned_cols=95 Identities=17% Similarity=0.182 Sum_probs=56.8
Q ss_pred eEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCC-CCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 325 riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r-~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
||+|+|| |..|..+|..|+. .|+ ...++++|.+-. .+. .+|.+.. .+. .........++.+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~----~~~-~l~~~~~t~d~~~ 64 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIE----TRA-TVKGYLGPEQLPD 64 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSS----SSC-EEEEEESGGGHHH
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccC----cCc-eEEEecCCCCHHH
Confidence 7999998 9999998876543 454 257999998641 100 0121111 000 0000000135889
Q ss_pred HhccCCCcEEEeccCCC---C-----------CCCHHHHHHHhccCCCCC
Q 013638 403 VVRKVKPHVLLGLSGVG---G-----------VFNEEVKTYFLCFIPCFI 438 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~---G-----------~FteevV~~Ma~~~~~pi 438 (439)
++++ +|++|=+.+.| | .+.+++++.|.++++..+
T Consensus 65 a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~ 112 (314)
T 1mld_A 65 CLKG--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAM 112 (314)
T ss_dssp HHTT--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred HhCC--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 9999 99998554443 3 346778888888887654
No 112
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=78.08 E-value=1.3 Score=40.82 Aligned_cols=36 Identities=22% Similarity=0.393 Sum_probs=28.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc--cccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD--GLIT 371 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~--GLl~ 371 (439)
.+|+|+|||.||+..|..+.. .|. ++.++|+. |...
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~gg~~~ 53 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGETPGGQLT 53 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSTTGGGG
T ss_pred cCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEeccCCCeec
Confidence 689999999999999988765 343 69999997 5443
No 113
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=78.04 E-value=1.1 Score=48.77 Aligned_cols=34 Identities=38% Similarity=0.544 Sum_probs=30.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+=
T Consensus 18 s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCCE
Confidence 8999999999999999999876 44 5999999874
No 114
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=77.37 E-value=3.4 Score=40.61 Aligned_cols=93 Identities=14% Similarity=0.054 Sum_probs=57.7
Q ss_pred Cce-EEEEecCCCchHHH-HHH---HHhhcccccc--cC--cchhHHHHHHHHHHHHHHh---------C----CCccCC
Q 013638 264 PKA-IVQFEDFQMKWAFE-TLE---RYRKRFCMFN--DD--IQGTAGVALAGLLGTVRAQ---------G----LSLTDF 321 (439)
Q Consensus 264 P~~-~IqfEDf~~~naf~-iL~---ryr~~~~~FN--DD--iQGTaaV~LAgll~A~r~~---------g----~~l~dl 321 (439)
|+. .|+.-=.+..|-.. +-. -....+++.| +- -+.+|=-+++.+|+..|-. | .+..+|
T Consensus 58 ~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l 137 (315)
T 3pp8_A 58 RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTR 137 (315)
T ss_dssp CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCS
T ss_pred CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCc
Confidence 776 67666666555323 221 1223455554 22 1455666788888877631 1 123445
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~~ 172 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAW-----GF-------PLRCWSRSR 172 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEcCCc
Confidence 559999999999999999988653 44 688888753
No 115
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=77.24 E-value=1.4 Score=44.31 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=27.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||+..|..|.+.. .| .+|.++|+..-
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 68999999999999999887641 13 37899988754
No 116
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=77.12 E-value=1.4 Score=41.31 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.. .|. ++.++|++.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999987754 343 689999864
No 117
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=77.06 E-value=1.4 Score=40.96 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.. .|. ++.++|+..
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 40 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESLP 40 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcCC
Confidence 589999999999999987755 343 689999863
No 118
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=76.82 E-value=3.1 Score=40.42 Aligned_cols=58 Identities=24% Similarity=0.324 Sum_probs=36.2
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 294 DDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++.++.....++..+.|++..+.+.. ++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVRLG----DPVLICGAGPIGLITMLCAKA-----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCTT----CCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33444444455556677776665544 599999998777766544332 454 35887775
No 119
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=76.78 E-value=1.6 Score=42.81 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=27.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..|.+.. ..| .+|.++|+.-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~--~~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLV--GSK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH--GGG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhC--CCC-------CeEEEEeCCC
Confidence 47999999999999999887621 123 3788898765
No 120
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=76.74 E-value=2.8 Score=42.66 Aligned_cols=92 Identities=15% Similarity=0.147 Sum_probs=52.8
Q ss_pred CCce-EEEEecCCCchHHHHHHHHhhcccccccCc---chhHHHHHHHHHHHHHHh---------C--------CCccCC
Q 013638 263 WPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G--------LSLTDF 321 (439)
Q Consensus 263 ~P~~-~IqfEDf~~~naf~iL~ryr~~~~~FNDDi---QGTaaV~LAgll~A~r~~---------g--------~~l~dl 321 (439)
.|+. .|+.-=.+..|- .+-.--+..+.+.|--- +.+|=-+++-+|+..|-. | ....+|
T Consensus 111 ~p~Lk~I~~~g~G~d~i-D~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l 189 (393)
T 2nac_A 111 AKNLKLALTAGIGSDHV-DLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDL 189 (393)
T ss_dssp CTTCCEEEESSSCCTTB-CHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCC
T ss_pred CCCCcEEEEcCcccccc-CHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccC
Confidence 4554 555444444332 12111122366665222 234445677777776521 1 011245
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~ 223 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPF-----DV-------HLHYTDRH 223 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSS
T ss_pred CCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEEcCC
Confidence 559999999999999999987643 43 68888875
No 121
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=76.69 E-value=1.9 Score=36.78 Aligned_cols=32 Identities=28% Similarity=0.547 Sum_probs=26.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|+|..|..+|+.+... | .+++++|++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-----g-------~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-----G-------HSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 7999999999999998887553 4 268889874
No 122
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=76.49 E-value=4.7 Score=39.56 Aligned_cols=58 Identities=26% Similarity=0.402 Sum_probs=36.6
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 294 DDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++.++.....++..+.|++..+.+.. ++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 158 ~~~~aal~~~~~ta~~~l~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 215 (370)
T 4ej6_A 158 DPVHGAFCEPLACCLHGVDLSGIKAG----STVAILGGGVIGLLTVQLARL-----AGA------TTVILSTR 215 (370)
T ss_dssp CTTGGGGHHHHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CHHHHhhhhHHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34455444556666777777766544 599999998777665544332 454 36777765
No 123
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=76.32 E-value=1.1 Score=47.02 Aligned_cols=80 Identities=19% Similarity=0.264 Sum_probs=41.8
Q ss_pred CceEEEeCchhHHHHH--HHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccc-cccCCcCCCCCCCC
Q 013638 323 DQKIVVVGAGSAGLGV--LKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGAS 399 (439)
Q Consensus 323 ~~riv~~GAGsAgiGi--A~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA-~~~~~~~~~~~~~s 399 (439)
..||.|+|||+.|.|. |..|+.. .++ +-..++|+|.+-=..+. .......+. ....+.. .....+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~e~l~~---~~~~~~~~l~~~~~~~~-I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDEERLDA---ILTIAKKYVEEVGADLK-FEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCHHHHHH---HHHHHHHHHHHTTCCCE-EEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCHHHHHH---HHHHHHHHhccCCCCcE-EEEECC
Confidence 3699999999975444 6665531 122 12579999985311111 111111111 0000100 011357
Q ss_pred HHHHhccCCCcEEEecc
Q 013638 400 LLEVVRKVKPHVLLGLS 416 (439)
Q Consensus 400 L~eaV~~vkPtvLIG~S 416 (439)
+.+++++ +|++|=+.
T Consensus 71 ~~eal~d--AD~VIiaa 85 (480)
T 1obb_A 71 LDDVIID--ADFVINTA 85 (480)
T ss_dssp HHHHHTT--CSEEEECC
T ss_pred HHHHhCC--CCEEEECC
Confidence 8899998 99988554
No 124
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=76.08 E-value=0.59 Score=46.03 Aligned_cols=96 Identities=17% Similarity=0.218 Sum_probs=53.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC-CCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~-r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||.|+|||+.|.++|..+.. .|+- +++++|.+-=..+. ..++.+...++.... .. ....++ +
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~~------~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~-~i---~~t~d~-~ 78 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDLG------DVYMFDIIEGVPQGKALDLNHCMALIGSPA-KI---FGENNY-E 78 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSTTHHHHHHHHHHHHHHHHTCCC-CE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCHHHHHHHHHHHHhHhhccCCCC-EE---EECCCH-H
Confidence 589999999999999877654 3541 39999985210000 001111111111110 00 112456 7
Q ss_pred HhccCCCcEEEeccCCC---CC-----------CCHHHHHHHhccCCCC
Q 013638 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVKTYFLCFIPCF 437 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~---G~-----------FteevV~~Ma~~~~~p 437 (439)
+++. +|++|=+.+.| |. +.+++++.+.++++.-
T Consensus 79 al~~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a 125 (328)
T 2hjr_A 79 YLQN--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNA 125 (328)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHCC--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCe
Confidence 8888 99988554333 32 2467788888887653
No 125
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=75.86 E-value=1.2 Score=41.47 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=26.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.+|+|+|||.||+..|..+... |+ ++.++|+
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~ 53 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEG 53 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEec
Confidence 6899999999999999887653 54 5888998
No 126
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=75.83 E-value=1.4 Score=35.91 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=25.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|+|..|..+|+.+.. .|. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 789999999999999887754 342 57788874
No 127
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=75.64 E-value=4.8 Score=38.58 Aligned_cols=48 Identities=23% Similarity=0.287 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
....+.+++..+.+..| +++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 149 ~~ta~~~l~~~~~~~g~----~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 149 GVTTYKAIKVSGVKPGD----WQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHTCCTTC----EEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeeEEeeecccCCCCCC----EEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 34456778877766554 999999998887665544432 23 36888776
No 128
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=75.35 E-value=2 Score=42.86 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||||+|||.||+..|..|... +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999988654 21 1378888876
No 129
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=75.15 E-value=2.5 Score=41.58 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=28.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCC
Confidence 689999999999999988765 3543 3799999865
No 130
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=74.98 E-value=1.9 Score=37.04 Aligned_cols=35 Identities=31% Similarity=0.553 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc-ccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD-GLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~-GLl 370 (439)
-+++|+|||.+|+-.|..+... | .++.++|+. +++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~~~~~ 37 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGGRSKV 37 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSCCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCCCcc
Confidence 4799999999999999887653 4 378899875 344
No 131
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=74.87 E-value=0.75 Score=38.91 Aligned_cols=77 Identities=12% Similarity=0.144 Sum_probs=44.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
.+|+|+|+|..|..+|..+.. .|. + ++++|+. .+ ..+.+++.... . .....++.++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~------~~~~~a~~~~~-~-~~~~~~~~~~ 77 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----ID------HVRAFAEKYEY-E-YVLINDIDSL 77 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HH------HHHHHHHHHTC-E-EEECSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HH------HHHHHHHHhCC-c-eEeecCHHHH
Confidence 799999999999888766543 232 3 8888873 11 11123321100 0 0013468888
Q ss_pred hccCCCcEEEeccCCC-CCCCHHH
Q 013638 404 VRKVKPHVLLGLSGVG-GVFNEEV 426 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~-G~Fteev 426 (439)
++. +|++|-+++.+ ..++.++
T Consensus 78 ~~~--~Divi~at~~~~~~~~~~~ 99 (144)
T 3oj0_A 78 IKN--NDVIITATSSKTPIVEERS 99 (144)
T ss_dssp HHT--CSEEEECSCCSSCSBCGGG
T ss_pred hcC--CCEEEEeCCCCCcEeeHHH
Confidence 887 89988766543 3344443
No 132
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=74.83 E-value=1.6 Score=41.31 Aligned_cols=31 Identities=29% Similarity=0.551 Sum_probs=24.6
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-|+|+|||.||+..|..|.. .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999987755 465 57788864
No 133
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=74.71 E-value=4.2 Score=39.48 Aligned_cols=49 Identities=29% Similarity=0.434 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 303 ~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.++..+.|++..+.+.. ++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVTLG----HKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34445566666555443 599999999877766554432 353 36777764
No 134
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=74.39 E-value=2.7 Score=41.62 Aligned_cols=32 Identities=28% Similarity=0.355 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
..|||+|||.+|+.+|..+.+..- .++.++|+
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~-----------~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSG-----------GSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC-----------SCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC-----------CcEEEEcc
Confidence 789999999999999998877530 37999998
No 135
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.20 E-value=2.4 Score=37.00 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=26.6
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.+|+|+|+|..|..+|+.+... .|. +++++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~----~g~-------~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRAR----YGK-------ISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHH----HCS-------CEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc----cCC-------eEEEEECC
Confidence 37999999999999999887653 142 68888874
No 136
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=73.94 E-value=1.9 Score=40.40 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 689999999999999987755 353 68999987
No 137
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=73.63 E-value=1.8 Score=39.85 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=25.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEE-Eecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~l-vDs~ 367 (439)
.+|+|+|||.||+..|..+... |. ++.+ +|+.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 5899999999999999987663 43 4666 8873
No 138
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=73.62 E-value=2.4 Score=34.44 Aligned_cols=32 Identities=28% Similarity=0.522 Sum_probs=25.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 589999999999999887754 24 268888873
No 139
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=73.41 E-value=1.7 Score=43.56 Aligned_cols=34 Identities=32% Similarity=0.419 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|+|+|||.||+..|..+.+. |. ++.++++..-
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~-----g~-------~v~v~E~~~~ 45 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKA-----GY-------KVTVLEARTR 45 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeccCC
Confidence 7999999999999999887653 42 6778877644
No 140
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=73.35 E-value=2.5 Score=42.27 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=28.7
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
..+|||+|||.||+..|..+.... .| .++.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~---~~-------~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK---PE-------WDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---TT-------SEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC---cC-------CCEEEEECCCc
Confidence 379999999999999998886641 12 37889988753
No 141
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=73.30 E-value=2.2 Score=35.46 Aligned_cols=32 Identities=31% Similarity=0.634 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|+|..|..+|+.+... |. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-----g~-------~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-----GK-------KVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999998887653 43 68888873
No 142
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=73.17 E-value=2.1 Score=41.48 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+.-.
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 789999999999999988765 353 6888887543
No 143
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=73.12 E-value=2.2 Score=41.67 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=27.6
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.-+|+|+|||.||+..|..|... |+ ++.++|+.-
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 37899999999999999887653 54 688888764
No 144
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=73.10 E-value=4.9 Score=34.58 Aligned_cols=88 Identities=25% Similarity=0.286 Sum_probs=49.3
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.+|+|.|| |-.|-.+++.+.+ .| .+++.++++.-- ...+......+..- +. .+..++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~~---~~~~~~~~~~~~~~--D~---~~~~~~~~ 63 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSSR---LPSEGPRPAHVVVG--DV---LQAADVDK 63 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGGG---SCSSSCCCSEEEES--CT---TSHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChhh---cccccCCceEEEEe--cC---CCHHHHHH
Confidence 68999998 8777777777654 34 268888875310 01110011111110 00 12235788
Q ss_pred HhccCCCcEEEeccCCCCC---------CCHHHHHHHhcc
Q 013638 403 VVRKVKPHVLLGLSGVGGV---------FNEEVKTYFLCF 433 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~G~---------FteevV~~Ma~~ 433 (439)
+++. +|++|=+.+.... .+..+++.|.+.
T Consensus 64 ~~~~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~ 101 (206)
T 1hdo_A 64 TVAG--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAH 101 (206)
T ss_dssp HHTT--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHcC--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHh
Confidence 8887 8999977764321 145666666654
No 145
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=73.07 E-value=1.6 Score=41.74 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
-.|+|+|||.||+..|-.+.+ .|+ ++.++|+.-.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 679999999999999988765 354 6888888753
No 146
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=73.05 E-value=2.1 Score=33.68 Aligned_cols=87 Identities=15% Similarity=0.083 Sum_probs=49.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
.+|+|+|+|..|..+++.+.. .|. .+++++|++.- .+...+..-.... ..+ ..+..++.++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~~------~~~~~~~~~~~~~-~~d-~~~~~~~~~~ 66 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDLA------ALAVLNRMGVATK-QVD-AKDEAGLAKA 66 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCHH------HHHHHHTTTCEEE-ECC-TTCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCHH------HHHHHHhCCCcEE-Eec-CCCHHHHHHH
Confidence 699999999999999887755 341 36888887421 1111110000000 000 0112347777
Q ss_pred hccCCCcEEEeccCCCCCCCHHHHHHHhcc
Q 013638 404 VRKVKPHVLLGLSGVGGVFNEEVKTYFLCF 433 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~G~FteevV~~Ma~~ 433 (439)
++. +|++|=+. |..++..+++...+.
T Consensus 67 ~~~--~d~vi~~~--~~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 67 LGG--FDAVISAA--PFFLTPIIAKAAKAA 92 (118)
T ss_dssp TTT--CSEEEECS--CGGGHHHHHHHHHHT
T ss_pred HcC--CCEEEECC--CchhhHHHHHHHHHh
Confidence 775 99999655 445667777666543
No 147
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=73.00 E-value=2.3 Score=43.52 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=28.0
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..+|+|+|||.||+..|..+... |. ++.++|+..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 37899999999999999998664 43 589999853
No 148
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=72.98 E-value=2 Score=41.99 Aligned_cols=33 Identities=24% Similarity=0.560 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 789999999999999988754 354 688898764
No 149
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=72.89 E-value=2.1 Score=39.99 Aligned_cols=32 Identities=38% Similarity=0.593 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 689999999999999988765 353 68999985
No 150
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=72.80 E-value=2.6 Score=41.90 Aligned_cols=38 Identities=26% Similarity=0.457 Sum_probs=28.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.||+..|..+.+... ..+ . -++.++|+..
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~-~~~-----~-~~v~liE~~~ 68 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQ-AQG-----A-LEVLFLDKQG 68 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHH-HHC-----C-CCEEEEESCS
T ss_pred CCEEEECCCHHHHHHHHHHHhccc-ccC-----c-ccEEEEecCC
Confidence 479999999999999999887642 000 0 3788998875
No 151
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=72.78 E-value=2 Score=41.09 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=28.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
..|+|+|||.+|+.+|..+.+ .|+ ++.++|+..+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 689999999999999998765 353 6999998644
No 152
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=72.71 E-value=3 Score=43.19 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=26.5
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.+|.|+|+|..|.++|..+.+. |. +++++|+.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 48999999999999999988653 43 57777763
No 153
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=72.64 E-value=2.1 Score=40.13 Aligned_cols=33 Identities=33% Similarity=0.576 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.+|+..|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988865 354 588888763
No 154
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=72.41 E-value=2.6 Score=35.77 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=26.7
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.+|+|+|+|..|..+|+.+... | .++.++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 47899999999999999888653 4 368888874
No 155
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=72.36 E-value=5.3 Score=38.99 Aligned_cols=93 Identities=18% Similarity=0.184 Sum_probs=52.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccC---CcCCCCCCCCH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG---DFMGLREGASL 400 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~---~~~~~~~~~sL 400 (439)
.||.|+|||+.|...|-.+.. .|+- ..++++|.+ .++ +......+.+..+ ++.- ... -
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~~-----~ev~L~Di~----~~~--~~g~~~dl~~~~~~~~~~~i--~~~-~ 68 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQTA-----NELVLIDVF----KEK--AIGEAMDINHGLPFMGQMSL--YAG-D 68 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCS-----SEEEEECCC---------CCHHHHHHTTSCCCTTCEEE--C---C
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCC----hHH--HHHHHHHHHHhHHhcCCeEE--EEC-C
Confidence 689999999999998877544 3442 479999975 121 2211122222110 0000 112 3
Q ss_pred HHHhccCCCcEEEeccCCC---CC-----------CCHHHHHHHhccCCCC
Q 013638 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVKTYFLCFIPCF 437 (439)
Q Consensus 401 ~eaV~~vkPtvLIG~S~~~---G~-----------FteevV~~Ma~~~~~p 437 (439)
.+++++ +|++|=+.+.| |- +-+++++.|.++++.-
T Consensus 69 ~~a~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a 117 (318)
T 1y6j_A 69 YSDVKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHG 117 (318)
T ss_dssp GGGGTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHhCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCc
Confidence 667887 99988555444 31 1267888888887653
No 156
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=72.35 E-value=2.3 Score=40.00 Aligned_cols=32 Identities=22% Similarity=0.519 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
..|+|+|||.||+.+|-.+.+ .|. ++.++|+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 589999999999999988765 354 69999987
No 157
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=71.79 E-value=3.5 Score=40.62 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=28.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 689999999999999998865 3543 36999988643
No 158
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=71.72 E-value=3 Score=35.05 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|+|..|..+|+.+... |. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----DI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 4899999999999999888653 43 68889874
No 159
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=71.60 E-value=2.2 Score=40.80 Aligned_cols=35 Identities=31% Similarity=0.372 Sum_probs=28.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
..|+|+|||.+|+.+|-.+.+. |. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----GV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCCCC
Confidence 5799999999999999887653 53 69999987544
No 160
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=71.57 E-value=2.2 Score=40.89 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=27.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.+|+.+|..+.+ .|. ++.++|+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999988765 353 699999874
No 161
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=71.53 E-value=2.4 Score=40.47 Aligned_cols=33 Identities=9% Similarity=0.183 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 689999999999999987654 353 689999864
No 162
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=71.46 E-value=2.3 Score=41.53 Aligned_cols=34 Identities=32% Similarity=0.484 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
-+|+|+|||.||+..|..+.++ |. ++.+++++.-
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~~ 35 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGER 35 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCCC
Confidence 3699999999999999988764 53 6888887543
No 163
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=71.27 E-value=3.9 Score=40.40 Aligned_cols=93 Identities=14% Similarity=0.082 Sum_probs=54.9
Q ss_pred CCce-EEEEecCCCchHHHHHHHHhhcccccccCc---chhHHHHHHHHHHHHHHh---------CC--------CccCC
Q 013638 263 WPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL--------SLTDF 321 (439)
Q Consensus 263 ~P~~-~IqfEDf~~~naf~iL~ryr~~~~~FNDDi---QGTaaV~LAgll~A~r~~---------g~--------~l~dl 321 (439)
.|+. .|+.-=.+..|- .+-.--+..+++.|--- +.+|=-+++-+++..|-. |. .-.+|
T Consensus 65 ~~~Lk~I~~~~~G~d~i-d~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l 143 (330)
T 4e5n_A 65 CPELRVIGCALKGFDNF-DVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGL 143 (330)
T ss_dssp CTTCCEEEESSSCCTTB-CHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCS
T ss_pred CCCCcEEEECCCccccc-CHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCcc
Confidence 3655 555544444442 12111223466665432 234556678888776621 10 01345
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+.+|.|+|.|..|-.+|+.+.. .|+ +++.+|+..
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~ 178 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQG-----WGA-------TLQYHEAKA 178 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTT-----SCC-------EEEEECSSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEECCCC
Confidence 56999999999999999988654 354 688888754
No 164
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=71.10 E-value=7.4 Score=34.07 Aligned_cols=50 Identities=14% Similarity=0.282 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 303 ~LAgll~A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.++..+.+++....--.. ++++|.|| |..|..+++++... |. +++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~~-----G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPG---ERVLIHSATGGVGMAAVSIAKMI-----GA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEETTTTSHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCC---CEEEEeeCCChHHHHHHHHHHHc-----CC-------EEEEEeCC
Confidence 444455555433222234 79999994 87788777665442 42 57777753
No 165
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=70.90 E-value=2.8 Score=43.55 Aligned_cols=36 Identities=22% Similarity=0.393 Sum_probs=29.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||+..|..|.... .| .+|.++|+..-
T Consensus 37 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 72 (588)
T 3ics_A 37 RKIVVVGGVAGGASVAARLRRLS---EE-------DEIIMVERGEY 72 (588)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhhC---cC-------CCEEEEECCCC
Confidence 79999999999999998887641 13 37999998765
No 166
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=70.84 E-value=2.7 Score=42.82 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=28.7
Q ss_pred CceEEEeCchhHHHHHHHHHHH-HHHH-HcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQ-AAAR-MAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~-~~~~-~~Gls~eeA~~~i~lvDs~ 367 (439)
..+|+|+|||.||+..|..+.. .... ..| .+|.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 3799999999999999999877 4210 002 379999986
No 167
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=70.73 E-value=2.7 Score=41.01 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 689999999999999988765 354 578888753
No 168
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=70.65 E-value=1.5 Score=45.44 Aligned_cols=32 Identities=13% Similarity=0.296 Sum_probs=25.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||||+|+|.||+..|+.|.. .+ -+|.++|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 589999999999998876532 12 379999986
No 169
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=70.64 E-value=4.6 Score=39.96 Aligned_cols=36 Identities=14% Similarity=0.357 Sum_probs=28.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCC
Confidence 489999999999999988765 3543 46999988654
No 170
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=70.64 E-value=1.5 Score=46.33 Aligned_cols=34 Identities=24% Similarity=0.440 Sum_probs=29.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+=
T Consensus 33 ~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D~ 66 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGNQ 66 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCCE
Confidence 8999999999999999988876 54 6999999764
No 171
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=70.51 E-value=5.1 Score=41.32 Aligned_cols=183 Identities=15% Similarity=0.184 Sum_probs=98.9
Q ss_pred ccccccCChhhHHHHHhcCCCCCeeEEEEec--------------------CceeeccCCCCCCcccccchhhhHHHh--
Q 013638 149 GMYFSAKDKGEMMSMIYNWPAQQVDMIVLTD--------------------GSRILGLGDLGVQGIGIPIGKLDVYVA-- 206 (439)
Q Consensus 149 Glyls~~d~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~Gm~I~iGKl~LY~a-- 206 (439)
|.|++..|...+..+|.. -+++++++.| |+.+=-+-+.|..-.-|.++....+++
T Consensus 177 G~~~~~~D~~eik~lL~~---~Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIES---FGLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHT---TTCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHH---cCCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 777666677777788875 4688888854 344444555555555666666654432
Q ss_pred ---hcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCceEEEEecCCCchHHHHHH
Q 013638 207 ---AAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLE 283 (439)
Q Consensus 207 ---~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~~P~~~IqfEDf~~~naf~iL~ 283 (439)
=-|+. .+-+ |..+|+ +-.|+|+.++.+.+-. + .+ +.++
T Consensus 254 Le~~~GiP---~~~~--------------~~p~G~-----------~~T~~~l~~la~~~g~------~--~~---~~i~ 294 (458)
T 3pdi_B 254 LAERTGVP---DRRF--------------GMLYGL-----------DAVDAWLMALAEISGN------P--VP---DRYK 294 (458)
T ss_dssp HHHHSCCC---EEEE--------------CCSCHH-----------HHHHHHHHHHHHHHSS------C--CC---HHHH
T ss_pred HHHHHCCC---EEec--------------CCCcCH-----------HHHHHHHHHHHHHHCC------c--hH---HHHH
Confidence 13555 2211 111222 2368888888888742 1 11 2345
Q ss_pred HHhhcccccccCcchhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEE
Q 013638 284 RYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL 363 (439)
Q Consensus 284 ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~l 363 (439)
+.|.++ +.++.- ....|.. .|++|+|.+.-..++++.+.+ .|+.. +.+
T Consensus 295 ~er~r~--------------~~~~~d----~~~~l~G---krv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~ 342 (458)
T 3pdi_B 295 RQRAQL--------------QDAMLD----THFMLSS---ARTAIAADPDLLLGFDALLRS-----MGAHT------VAA 342 (458)
T ss_dssp HHHHHH--------------HHHHHH----HHHHHTT---CEEEEECCHHHHHHHHHHHHT-----TTCEE------EEE
T ss_pred HHHHHH--------------HHHHHH----HHHhcCC---CEEEEECCcHHHHHHHHHHHH-----CCCEE------EEE
Confidence 555431 112222 2223444 899999999999999988843 56632 222
Q ss_pred EecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHHhccCCCcEEEeccC
Q 013638 364 LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (439)
Q Consensus 364 vDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~ 417 (439)
.-.. ..+.+... +.. . -+. .+...+++.++..+||++||-|-
T Consensus 343 ~~~~-----~~~~~~~~--~~~-~--v~~--~D~~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 343 VVPA-----RAAALVDS--PLP-S--VRV--GDLEDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp EESS-----CCSCCTTT--TSS-C--EEE--SHHHHHHHHHHHHTCSEEEECTT
T ss_pred EECC-----CChhhhhC--ccC-c--EEe--CCHHHHHHHHHhcCCCEEEEChh
Confidence 2111 11111111 000 0 000 01224778899999999999764
No 172
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=70.37 E-value=6.3 Score=37.92 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.++|..+..+ |. ++++++|+.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 6899999999999999988764 43 378888884
No 173
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=70.32 E-value=8.4 Score=36.83 Aligned_cols=55 Identities=20% Similarity=0.272 Sum_probs=31.8
Q ss_pred chhHHHHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 297 QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 297 QGTaaV~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++...-.++..+.+.+..+.+.. ++++|.|||+.|...+.+... .|. +.++.+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~~~~g----~~VlV~GaG~vG~~aiq~ak~-----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQGCEN----KNVIIIGAGTIGLLAIQCAVA-----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTTCCTT----SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhccCCC----CEEEEECCCCcchHHHHHHHH-----cCC------cEEEEEec
Confidence 33333334444555666555443 599999999887665544332 343 35666664
No 174
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=70.14 E-value=2.6 Score=39.88 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 6899999999999999888764 43 68888874
No 175
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=70.10 E-value=2.7 Score=41.26 Aligned_cols=34 Identities=35% Similarity=0.470 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.. .|++ ++.++|+..
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~-----~G~~------~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQ-----AGIG------KVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCS------EEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCC
Confidence 689999999999999988765 3542 378888754
No 176
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=70.01 E-value=1.4 Score=43.36 Aligned_cols=84 Identities=18% Similarity=0.251 Sum_probs=49.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
-||+++|||-.|--+|+.|.+ ..++.++|... ..+... ++++.... .+ ..+..+|.++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~------~~~~~~-~~~~~~~~-~d-~~d~~~l~~~ 74 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN------ENLEKV-KEFATPLK-VD-ASNFDKLVEV 74 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH------HHHHHH-TTTSEEEE-CC-TTCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH------HHHHHH-hccCCcEE-Ee-cCCHHHHHHH
Confidence 589999999988877776532 13577777532 111111 11221100 00 0123468889
Q ss_pred hccCCCcEEEeccCCCCCCCHHHHHHHhcc
Q 013638 404 VRKVKPHVLLGLSGVGGVFNEEVKTYFLCF 433 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~G~FteevV~~Ma~~ 433 (439)
+++ .|++|-+ .|..+...++++-.+.
T Consensus 75 ~~~--~DvVi~~--~p~~~~~~v~~~~~~~ 100 (365)
T 3abi_A 75 MKE--FELVIGA--LPGFLGFKSIKAAIKS 100 (365)
T ss_dssp HTT--CSEEEEC--CCGGGHHHHHHHHHHH
T ss_pred HhC--CCEEEEe--cCCcccchHHHHHHhc
Confidence 987 8999854 4677888888776554
No 177
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=69.96 E-value=2.4 Score=40.33 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=28.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
..|+|+|||.+|+.+|-.+.+. |+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 5799999999999999887653 53 69999987544
No 178
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=69.86 E-value=12 Score=37.14 Aligned_cols=94 Identities=17% Similarity=0.109 Sum_probs=60.5
Q ss_pred HhCCce-EEEEecCCCchHHHHHHHHhhcccccccCcc---hhHHHHHHHHHHHHHHh---------CC------CccCC
Q 013638 261 ARWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL------SLTDF 321 (439)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr~~~~~FNDDiQ---GTaaV~LAgll~A~r~~---------g~------~l~dl 321 (439)
+..|+. .|+.-=.+..|- .+-.--+..+++.|---- .+|=-+++.+++..|-. |. .-.+|
T Consensus 85 ~~~~~Lk~I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l 163 (335)
T 2g76_A 85 NAAEKLQVVGRAGTGVDNV-DLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTEL 163 (335)
T ss_dssp HHCSSCCEEEESSSSCTTB-CHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCC
T ss_pred hhCCCCcEEEECCCCcchh-ChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCC
Confidence 346886 777666665552 222222345888886433 34455788888887742 10 11345
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 197 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSF-----GM-------KTIGYDPI 197 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred CcCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 559999999999999999987643 43 68888864
No 179
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=69.85 E-value=2.7 Score=40.40 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=28.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.+|+.+|-.+.+. .|. .++.++|+..
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 6899999999999999988761 241 2699999876
No 180
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=69.77 E-value=2.5 Score=41.00 Aligned_cols=33 Identities=12% Similarity=0.345 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+.-
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 689999999999999988765 354 588888753
No 181
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=69.71 E-value=2.2 Score=41.56 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|-.+.+ .|+ ++.++|+.-
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 589999999999999987754 464 688999874
No 182
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=69.61 E-value=2.9 Score=42.52 Aligned_cols=36 Identities=19% Similarity=0.406 Sum_probs=28.0
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 320 dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+++++||+|+|.|.+|+++|+++.+. |. ++...|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~-----G~-------~V~~~D~~ 41 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKL-----GA-------IVTVNDGK 41 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEEESS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 34559999999999999998887663 43 67777764
No 183
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=69.60 E-value=3.6 Score=40.30 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..|.++.. +.+ + ..++.++++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~-~~~-~----~~~V~vlEa~ 43 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIK-EKN-L----PLELTLVEAS 43 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHT-TTT-C----SEEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhcc-ccC-C----CCCEEEEECC
Confidence 589999999999999999988651 011 0 1368888876
No 184
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=69.54 E-value=3 Score=41.94 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=26.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVE-----QGA-------QVTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 689999999999999977654 343 79999987
No 185
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=69.47 E-value=2.5 Score=42.89 Aligned_cols=39 Identities=23% Similarity=0.454 Sum_probs=29.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+.. ..|++. .++.++|+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~~ 41 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQA 41 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcCC
Confidence 48999999999999999987732 146531 1389998863
No 186
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=69.42 E-value=5 Score=39.88 Aligned_cols=87 Identities=23% Similarity=0.232 Sum_probs=49.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccc----cCC---CCCChhhhccccccCCcCCCCC
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLIT----KER---KNLDPAAAPFAKDPGDFMGLRE 396 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~----~~r---~~L~~~k~~fA~~~~~~~~~~~ 396 (439)
.||.|+|+|+-|.++|..+... | .+++++|++--.. ..+ ..++..+ + +. . ..-
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l--~~-~---i~~ 89 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--F--PE-T---LKA 89 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--C--CT-T---EEE
T ss_pred CeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--c--CC-C---eEE
Confidence 6899999999999999888653 4 2577777742110 000 0111110 0 00 0 001
Q ss_pred CCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhccC
Q 013638 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLCFI 434 (439)
Q Consensus 397 ~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~~~ 434 (439)
..++.|+++. +|++| ++ +|--+.+++++.++.+.
T Consensus 90 t~d~~ea~~~--aDvVi-la-Vp~~~~~~vl~~i~~~l 123 (356)
T 3k96_A 90 YCDLKASLEG--VTDIL-IV-VPSFAFHEVITRMKPLI 123 (356)
T ss_dssp ESCHHHHHTT--CCEEE-EC-CCHHHHHHHHHHHGGGC
T ss_pred ECCHHHHHhc--CCEEE-EC-CCHHHHHHHHHHHHHhc
Confidence 2467788776 77766 33 23346677777776654
No 187
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=69.28 E-value=10 Score=37.50 Aligned_cols=95 Identities=16% Similarity=0.214 Sum_probs=63.0
Q ss_pred HHHhCCce-EEEEecCCCchHHHHHHHHh-hcccccccCcc---hhHHHHHHHHHHHHHHh---------C-------CC
Q 013638 259 VHARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G-------LS 317 (439)
Q Consensus 259 v~~~~P~~-~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQ---GTaaV~LAgll~A~r~~---------g-------~~ 317 (439)
+.+..|+. .|+.--.+..|- . ++..+ ..+++.|=--- .+|=-+++-+|+..|-. | ..
T Consensus 58 ~l~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~ 135 (334)
T 2pi1_A 58 LLSKMPRLKLIHTRSVGFDHI-D-LDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEIL 135 (334)
T ss_dssp HHTTCTTCCEEEESSSCCTTB-C-HHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGC
T ss_pred HHhhCCCCeEEEECCcccccc-C-HHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCcc
Confidence 44557887 888777776653 2 23333 34777775322 35556788888887621 1 01
Q ss_pred ccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 318 LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 318 l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.+|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.
T Consensus 136 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~ 173 (334)
T 2pi1_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV 173 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred ceeccCceEEEECcCHHHHHHHHHHHHC-----cC-------EEEEECCC
Confidence 2245559999999999999999988754 43 68888875
No 188
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=69.20 E-value=0.92 Score=46.95 Aligned_cols=102 Identities=12% Similarity=0.054 Sum_probs=56.4
Q ss_pred ceEEEeCchhH-HHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc--ccccCCCCCChhhhcccc-ccCCcCCCCCCCC
Q 013638 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--LITKERKNLDPAAAPFAK-DPGDFMGLREGAS 399 (439)
Q Consensus 324 ~riv~~GAGsA-giGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G--Ll~~~r~~L~~~k~~fA~-~~~~~~~~~~~~s 399 (439)
.||.|+|||+. +.+++..|+.. ..+++ ...++|+|.+- =..+. +.+....+.. -..++.- ....+
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~~e~~~~---~~~~~~~~~~~~~~~~~i-~~t~D 76 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEGKEKLEI---VGALAKRMVEKAGVPIEI-HLTLD 76 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGGHHHHHH---HHHHHHHHHHHTTCCCEE-EEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCChHHHHH---HHHHHHHHHhhcCCCcEE-EEeCC
Confidence 69999999997 44444444331 14553 25799999853 11110 1111112211 0001000 11357
Q ss_pred HHHHhccCCCcEEEeccCCCCC----------------------------------CCHHHHHHHhccCCCCC
Q 013638 400 LLEVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVKTYFLCFIPCFI 438 (439)
Q Consensus 400 L~eaV~~vkPtvLIG~S~~~G~----------------------------------FteevV~~Ma~~~~~pi 438 (439)
+.|++++ +|++|=..++++. +=.++++.|.++||.-+
T Consensus 77 ~~eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ 147 (450)
T 1s6y_A 77 RRRALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAW 147 (450)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeE
Confidence 8999999 9999865554321 23588889999987644
No 189
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=69.19 E-value=3.4 Score=39.57 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.+|+.+|-.+.+ .|. ++.++|+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~-----~G~-------~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILAR-----KGY-------SVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeccC
Confidence 689999999999999988754 353 799999864
No 190
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=69.19 E-value=2.9 Score=42.32 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=27.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||...|-.|..... .|+ ++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999998877431 343 6999998644
No 191
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=69.16 E-value=3.3 Score=40.25 Aligned_cols=34 Identities=35% Similarity=0.402 Sum_probs=25.7
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
+|+|+|||.||+..|-.+... ..|+ ++.++|+.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECCC
Confidence 699999999999999887653 0143 677887653
No 192
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=69.11 E-value=2.8 Score=40.55 Aligned_cols=35 Identities=26% Similarity=0.564 Sum_probs=28.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
..|+|+|||.+|+.+|-.+.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988765 354 69999987654
No 193
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=69.07 E-value=2.2 Score=39.97 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.+|+|+|||.||+..|..+... |. ++.++|+
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 6899999999999999887653 53 5888887
No 194
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=68.94 E-value=4 Score=41.49 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=28.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..+.+... ...++.++|+..
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~---------~~~~V~lie~~~ 71 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYG---------DANEIVVFDQNS 71 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHG---------GGSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCC---------CCCeEEEEECCC
Confidence 689999999999999999877530 014799999864
No 195
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=68.91 E-value=2.7 Score=41.61 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.||.|+|||..|.|||..++.+ |+ ++.++|.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 6899999999999999887664 54 5788885
No 196
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=68.87 E-value=0.89 Score=47.43 Aligned_cols=102 Identities=20% Similarity=0.209 Sum_probs=56.3
Q ss_pred ceEEEeCchhH-HHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccc-cccCCcCCCCCCCCHH
Q 013638 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGASLL 401 (439)
Q Consensus 324 ~riv~~GAGsA-giGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA-~~~~~~~~~~~~~sL~ 401 (439)
.||.|+|||+. +.++|..|+.. ..+++ ...++|+|.+-=..+. +.+....+. .-..+.. .....++.
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~e~~~~---~~~~~~~~l~~~~~~~~-I~~t~D~~ 97 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDKERQDR---IAGACDVFIREKAPDIE-FAATTDPE 97 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCHHHHHH---HHHHHHHHHHHHCTTSE-EEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCHHHHHH---HHHHHHHHhccCCCCCE-EEEECCHH
Confidence 69999999996 44455554431 12553 2579999985311111 111111221 1000100 01135799
Q ss_pred HHhccCCCcEEEeccCCCCC----------------------------------CCHHHHHHHhccCCCCC
Q 013638 402 EVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVKTYFLCFIPCFI 438 (439)
Q Consensus 402 eaV~~vkPtvLIG~S~~~G~----------------------------------FteevV~~Ma~~~~~pi 438 (439)
+++++ +|++|=+.++++. +=+++++.|.++||.-+
T Consensus 98 eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ 166 (472)
T 1u8x_X 98 EAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAW 166 (472)
T ss_dssp HHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeE
Confidence 99998 9999855544221 23588889999988654
No 197
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=68.84 E-value=3.1 Score=41.67 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||+..|..+.+.. .| .+|.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 48999999999999999887641 13 37899988653
No 198
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=68.64 E-value=3.6 Score=40.76 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=29.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
.+|+|+|||.||+..|..+.+. |.+ .+|.++|+..-+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~-----g~~-----~~V~lie~~~~~ 44 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQA-----GYQ-----GLITVVGDEAER 44 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHH-----TCC-----SCEEEEESSCSC
T ss_pred CcEEEECChHHHHHHHHHHHcc-----CCC-----CeEEEEECCCCC
Confidence 6899999999999999988664 432 369999987644
No 199
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=68.59 E-value=2.7 Score=42.27 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=26.6
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
||||+|||.||+..|..+.+. |.+ -+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~~-----~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DKE-----SDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CSS-----SCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CCC-----CcEEEEeCCC
Confidence 799999999999999877553 432 3689998753
No 200
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=68.48 E-value=3.1 Score=37.80 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.|+|+|||.||+..|..+... |+ ++.++++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~-----g~-------~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQK-----GV-------RVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 6899999999999999887653 43 68888875
No 201
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=68.09 E-value=4.5 Score=38.50 Aligned_cols=38 Identities=18% Similarity=0.214 Sum_probs=27.1
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.|+|+|||.+|+.+|-.+.+.. .+. --..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G-----~~~-~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERY-----HSV-LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH-----TTT-SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhc-----ccc-CCCceEEEEECCC
Confidence 5899999999999998887643 000 0003799999873
No 202
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=68.03 E-value=5.5 Score=38.01 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.5
Q ss_pred ceEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~G-AGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4899999 99999999988754 343 58888864
No 203
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=67.98 E-value=3.3 Score=40.03 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|-.+... |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 5799999999999999887654 54 578888754
No 204
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=67.78 E-value=3.1 Score=43.50 Aligned_cols=33 Identities=30% Similarity=0.377 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999998865 354 599999874
No 205
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=67.67 E-value=3.4 Score=42.38 Aligned_cols=36 Identities=14% Similarity=0.351 Sum_probs=28.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||+..|..+.... .| -+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~---~~-------~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS---ET-------AEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCC
Confidence 48999999999999998886631 12 37999998754
No 206
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=67.66 E-value=4.6 Score=38.39 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.-|+|+|||.||+..|..+.+. +.|+ ++.++|+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 6799999999999999888654 3465 68889875
No 207
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=67.61 E-value=5 Score=41.01 Aligned_cols=35 Identities=14% Similarity=0.388 Sum_probs=28.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..|... ..| .+|.++|+..
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~---~~g-------~~V~lie~~~ 46 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRAR---DPG-------ARVLIVSEDP 46 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHH---STT-------CEEEEEESSS
T ss_pred CCEEEECChHHHHHHHHHHHhc---CCC-------CeEEEEeCCC
Confidence 6899999999999999988664 112 4799999874
No 208
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=67.50 E-value=3.2 Score=38.40 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .|. .++.++|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999988754 354 168999985
No 209
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=67.46 E-value=3.4 Score=40.01 Aligned_cols=49 Identities=18% Similarity=0.310 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 303 ~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.++..+.|++..+.+.. ++|+|+|||..|...+.+.. ..|. ++++.+|+
T Consensus 151 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~a~qla~-----~~Ga------~~Vi~~~~ 199 (352)
T 3fpc_A 151 MMTTGFHGAELANIKLG----DTVCVIGIGPVGLMSVAGAN-----HLGA------GRIFAVGS 199 (352)
T ss_dssp HHHHHHHHHHHTTCCTT----CCEEEECCSHHHHHHHHHHH-----TTTC------SSEEEECC
T ss_pred hhHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHH-----HcCC------cEEEEECC
Confidence 34455566766665544 59999999977766654432 2454 36887776
No 210
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=67.40 E-value=3.2 Score=39.42 Aligned_cols=32 Identities=28% Similarity=0.652 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.+||..+..+ |. +++++|+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5799999999999999988653 43 68888874
No 211
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=67.37 E-value=2 Score=46.96 Aligned_cols=37 Identities=30% Similarity=0.512 Sum_probs=31.0
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~v 446 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDTI 446 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCee
Confidence 458999999999999999988765 54 69999998743
No 212
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=67.36 E-value=3.1 Score=41.29 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..+... ..| -+|.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~---~~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL---MPD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH---CTT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC---CCC-------CeEEEECCCC
Confidence 5899999999999999988762 123 3788888864
No 213
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=67.31 E-value=3.4 Score=40.23 Aligned_cols=33 Identities=30% Similarity=0.422 Sum_probs=26.4
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
+|+|+|||.||+..|..+.+. | .++.++++..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~~ 34 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLPI 34 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCCC
Confidence 699999999999999888663 4 36888887643
No 214
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=67.17 E-value=3.2 Score=38.75 Aligned_cols=31 Identities=29% Similarity=0.532 Sum_probs=24.4
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 47999999999999876644 454 68889874
No 215
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=67.12 E-value=5.4 Score=39.21 Aligned_cols=37 Identities=16% Similarity=0.428 Sum_probs=29.2
Q ss_pred cCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 319 ~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~-----G~-------~V~~~d~~ 178 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPF-----GV-------KLYYWSRH 178 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSS
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 355569999999999999999987543 43 68888875
No 216
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=67.05 E-value=2.7 Score=41.43 Aligned_cols=95 Identities=17% Similarity=0.097 Sum_probs=53.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC-CCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~-r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||.|+|||+.|..+|-+|+.. ++ ...++|+|.+-=-..+ ..+|.+.. +|..+.. -..+..+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~------i~~~~~~ 72 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKK------IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeE------EEECCHH
Confidence 6999999999999988876442 43 2589999973100000 00121111 2222110 0113467
Q ss_pred HhccCCCcEEEeccCCCCC--------------CCHHHHHHHhccCCCC
Q 013638 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVKTYFLCFIPCF 437 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~G~--------------FteevV~~Ma~~~~~p 437 (439)
++++ +|++|=+.+.|.. +-+++++.|.++++.-
T Consensus 73 a~~~--aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a 119 (326)
T 2zqz_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNG 119 (326)
T ss_dssp GGGG--CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCS
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 7888 9999855554422 2345667777777654
No 217
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=66.95 E-value=6.9 Score=37.81 Aligned_cols=37 Identities=30% Similarity=0.423 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHH
Q 013638 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAV 343 (439)
Q Consensus 303 ~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~ 343 (439)
.++..+.|++..+.+.. ++|+|.|||..|...+.+..
T Consensus 153 ~~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~a~qla~ 189 (352)
T 1e3j_A 153 PLSVGVHACRRAGVQLG----TTVLVIGAGPIGLVSVLAAK 189 (352)
T ss_dssp HHHHHHHHHHHHTCCTT----CEEEEECCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCCC----CEEEEECCCHHHHHHHHHHH
Confidence 44445566666555443 59999999877766655443
No 218
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=66.90 E-value=2.3 Score=39.54 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 689999999999999988755 343 57788853
No 219
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=66.85 E-value=13 Score=36.30 Aligned_cols=81 Identities=10% Similarity=0.116 Sum_probs=48.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
.+++|+|+|..|-.+++.+... .+. ++|+++|+. + .......+..... .. .... ++.|+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~--a~~la~~l~~~~g-~~-~~~~-~~~ea 180 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------A--SPEILERIGRRCG-VP-ARMA-APADI 180 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------C--CHHHHHHHHHHHT-SC-EEEC-CHHHH
T ss_pred cEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------H--HHHHHHHHHHhcC-Ce-EEEe-CHHHH
Confidence 7999999999998888776653 233 589999986 1 1122222221100 00 0113 79999
Q ss_pred hccCCCcEEEeccCCC-CCCCHHHH
Q 013638 404 VRKVKPHVLLGLSGVG-GVFNEEVK 427 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~-G~FteevV 427 (439)
++. +|++|-++..+ -+|..+++
T Consensus 181 v~~--aDIVi~aT~s~~pvl~~~~l 203 (313)
T 3hdj_A 181 AAQ--ADIVVTATRSTTPLFAGQAL 203 (313)
T ss_dssp HHH--CSEEEECCCCSSCSSCGGGC
T ss_pred Hhh--CCEEEEccCCCCcccCHHHc
Confidence 988 99998665432 34554443
No 220
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=66.81 E-value=3.7 Score=41.75 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=28.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..+.+.- ..|. ++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G~-------~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PETT-------QVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTTE-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCcC-------EEEEEeCCC
Confidence 57999999999999999887640 0142 799999874
No 221
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=66.80 E-value=3.4 Score=41.22 Aligned_cols=32 Identities=28% Similarity=0.356 Sum_probs=26.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|-.+... |+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 4799999999999999887664 54 68888875
No 222
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=66.78 E-value=3.2 Score=47.32 Aligned_cols=34 Identities=18% Similarity=0.384 Sum_probs=30.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.||+++|+|..|.-||+.|+.+++ ++|.++|.+=
T Consensus 28 s~VlIvG~GGlGseiak~La~aGV-----------g~itlvD~D~ 61 (1015)
T 3cmm_A 28 SNVLILGLKGLGVEIAKNVVLAGV-----------KSMTVFDPEP 61 (1015)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC-----------SEEEEECCSB
T ss_pred CEEEEECCChHHHHHHHHHHHcCC-----------CeEEEecCCE
Confidence 999999999999999999988744 6999999863
No 223
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=66.77 E-value=3.8 Score=40.34 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.+|+.+|..+.+. .-|+ ++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~---~pG~-------~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQL---APGR-------SLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhc---CCCC-------eEEEEeCCC
Confidence 5799999999999999887653 0143 688999753
No 224
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=66.68 E-value=3.5 Score=40.40 Aligned_cols=33 Identities=33% Similarity=0.564 Sum_probs=26.3
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
+|+|+|||.||+..|-.|.+. |. ++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G~-------~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----GH-------EIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCCC
Confidence 699999999999999888653 43 6888887543
No 225
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=66.68 E-value=3.5 Score=43.73 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=27.6
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.+|+|+|||.||+..|-.+.. .|+ ++.++|+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~ 55 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERS 55 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCC
Confidence 3899999999999999987755 354 68899987
No 226
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=66.61 E-value=4 Score=40.86 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKRG 39 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 5799999999999999877653 43 699999873
No 227
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=66.54 E-value=5.9 Score=38.94 Aligned_cols=87 Identities=15% Similarity=0.032 Sum_probs=54.0
Q ss_pred EEEEecCCCchHHHHHHHHh-hcccccccCcc---hhHHHHHHHHHHHHHH---------hCC-------CccCCCCceE
Q 013638 267 IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRA---------QGL-------SLTDFADQKI 326 (439)
Q Consensus 267 ~IqfEDf~~~naf~iL~ryr-~~~~~FNDDiQ---GTaaV~LAgll~A~r~---------~g~-------~l~dl~~~ri 326 (439)
.|+.--.+..|- . ++..+ ..+++.|---. .+|=-+++.+++..|- .|. .-.+|.+.+|
T Consensus 72 ~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~v 149 (331)
T 1xdw_A 72 YILTRTAGTDHI-D-KEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTV 149 (331)
T ss_dssp EEEESSSCCTTB-C-HHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEE
T ss_pred EEEEcccccccc-C-HHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEE
Confidence 566555555542 1 22222 34666664332 3444578888887761 121 1134566999
Q ss_pred EEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 327 VVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 327 v~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 150 gIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~ 178 (331)
T 1xdw_A 150 GVVGLGRIGRVAAQIFHGM-----GA-------TVIGEDVF 178 (331)
T ss_dssp EEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred EEECcCHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 9999999999999987653 43 68888874
No 228
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=66.39 E-value=3 Score=39.44 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.. .|+ ++.++|+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 689999999999999988765 354 57788864
No 229
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=66.38 E-value=4.6 Score=39.42 Aligned_cols=35 Identities=17% Similarity=0.388 Sum_probs=23.0
Q ss_pred ceEEEeCchhHH-----HHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAG-----LGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAg-----iGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.||+|.|.|++| +++|+. +. +.|- +=.|+.+.+|+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~----L~-~~g~------~V~~vg~~~g~ 42 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACARE----FQ-ARGY------AVHWLGTPRGI 42 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHH----HH-HTTC------EEEEEECSSST
T ss_pred CcEEEEcCCCHHHHHHHHHHHHH----HH-hCCC------EEEEEECCchH
Confidence 599999999986 444444 44 3453 23567777775
No 230
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=66.34 E-value=5.3 Score=37.70 Aligned_cols=81 Identities=19% Similarity=0.295 Sum_probs=46.9
Q ss_pred CceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCCh----hhhccccccCCcCCCCCC
Q 013638 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP----AAAPFAKDPGDFMGLREG 397 (439)
Q Consensus 323 ~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~----~k~~fA~~~~~~~~~~~~ 397 (439)
..+|+|.|| |-.|..+++.|++. |-. -+++.+|+...-.. ...+.. ....+..- + ..+.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~-----g~~-----~~v~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~--D---l~d~ 87 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQS-----YET-----YKIINFDALTYSGN-LNNVKSIQDHPNYYFVKG--E---IQNG 87 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH-----CTT-----EEEEEEECCCTTCC-GGGGTTTTTCTTEEEEEC--C---TTCH
T ss_pred CCeEEEECCccHHHHHHHHHHHhh-----CCC-----cEEEEEeccccccc-hhhhhhhccCCCeEEEEc--C---CCCH
Confidence 379999998 88888888887764 421 26777776532111 011111 01111111 0 0122
Q ss_pred CCHHHHhccCCCcEEEeccCCC
Q 013638 398 ASLLEVVRKVKPHVLLGLSGVG 419 (439)
Q Consensus 398 ~sL~eaV~~vkPtvLIG~S~~~ 419 (439)
.++.++++..++|++|=+.+..
T Consensus 88 ~~~~~~~~~~~~d~Vih~A~~~ 109 (346)
T 4egb_A 88 ELLEHVIKERDVQVIVNFAAES 109 (346)
T ss_dssp HHHHHHHHHHTCCEEEECCCCC
T ss_pred HHHHHHHhhcCCCEEEECCccc
Confidence 4588888888899999777643
No 231
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=66.29 E-value=4.1 Score=40.72 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=27.4
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
+|+|+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999887641 13 3799999865
No 232
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=66.15 E-value=4.2 Score=40.55 Aligned_cols=34 Identities=15% Similarity=0.338 Sum_probs=27.3
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGD 35 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCC
Confidence 6999999999999999887641 13 4799999865
No 233
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=66.09 E-value=3.3 Score=42.88 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=29.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||...|-.|..... .|+ +|.++|+.-.
T Consensus 26 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~~ 62 (550)
T 2e4g_A 26 DKILIVGGGTAGWMAASYLGKALQ--GTA-------DITLLQAPDI 62 (550)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTT--TSS-------EEEEEECCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhcC--CCC-------cEEEEeCCCC
Confidence 689999999999999998876420 243 7999998644
No 234
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=65.91 E-value=4.1 Score=43.55 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 6899999999999999988664 43 699999863
No 235
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=65.90 E-value=4.3 Score=40.26 Aligned_cols=35 Identities=26% Similarity=0.494 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
-||||+|||.||+..|..| . ..| .+|.++|+.--+
T Consensus 10 ~~~vIvGgG~AGl~aA~~L--~---~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAA--L---GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CSEEEECCSHHHHHHHHHH--T---TTC-------SCEEEECSSSSC
T ss_pred CCEEEEcCcHHHHHHHHHH--h---CCC-------CEEEEEECCCCC
Confidence 6999999999999999998 1 223 379999886543
No 236
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=65.81 E-value=6.5 Score=40.93 Aligned_cols=32 Identities=13% Similarity=0.231 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|.|+|+|..|.++|..|.+. |. +++++|+.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~ 42 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT 42 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 4899999999999999988663 53 57788763
No 237
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=65.79 E-value=5.1 Score=38.61 Aligned_cols=48 Identities=21% Similarity=0.418 Sum_probs=29.9
Q ss_pred HHHHHHHHHH-HhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 303 ALAGLLGTVR-AQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 303 ~LAgll~A~r-~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.++..+.|++ ..+. .. ++|+|+|||..|..++.+... .|. ++++.+|+
T Consensus 149 ~~~ta~~~l~~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 197 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV--SG---KSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDP 197 (343)
T ss_dssp HHHHHHHHHHSTTCC--TT---SCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHHhCCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 3444455665 3333 45 899999998777776654432 354 36777775
No 238
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=65.77 E-value=3.3 Score=41.31 Aligned_cols=36 Identities=22% Similarity=0.466 Sum_probs=28.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..+...+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999877431 23 3688888764
No 239
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=65.76 E-value=4.1 Score=41.31 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 57999999999999999886631 13 37999998754
No 240
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=65.71 E-value=4.8 Score=38.86 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|||+.|.++|..+... |+. +++++|.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~~------~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NLA------DVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCc------eEEEEeCC
Confidence 5899999999999999887654 442 59999975
No 241
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=65.52 E-value=3.6 Score=41.69 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
-+|+|+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~~ 58 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQ-----LGM-------KVAVVEKRS 58 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 579999999999999988765 353 699999754
No 242
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=65.39 E-value=3.6 Score=42.31 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 76 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAM-----GG-------RQLIVDRWP 76 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 6899999999999999887653 43 699999875
No 243
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=65.34 E-value=5.2 Score=38.48 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=28.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.||.|+|+|..|..+|..+..+... .. ....+++++|+..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~-~~----~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQ-LA----QFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH-CT----TEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCc-cc----CCCCeEEEEEcCh
Confidence 6999999999999999998876420 00 0013688888753
No 244
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=65.33 E-value=3.4 Score=43.27 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=27.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999988865 354 699999864
No 245
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=65.21 E-value=3.2 Score=41.65 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 689999999999999977654 354 68999986
No 246
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=65.19 E-value=3.9 Score=40.17 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=28.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
..|||+|||.||+.+|-.+.+ .|. +++.++|+....
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 579999999999999987765 354 269999987654
No 247
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=65.03 E-value=3.4 Score=41.69 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=27.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.-
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~-----~g~-------~V~lie~~~ 39 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQ-----LGL-------KVLAVEAGE 39 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999988754 343 799999863
No 248
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=64.93 E-value=4 Score=41.26 Aligned_cols=32 Identities=28% Similarity=0.568 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~ 36 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAA-----FGK-------RVALIESK 36 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEcCC
Confidence 689999999999999988765 343 69999986
No 249
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=64.91 E-value=3.7 Score=41.31 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQL-----GF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 5799999999999999887653 43 699999874
No 250
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=64.77 E-value=3 Score=40.90 Aligned_cols=95 Identities=19% Similarity=0.140 Sum_probs=53.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC-CCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~-r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||.|+|||+.|..+|-+|+.. ++- ..|+|+|.+-=-..+ ..+|.+.. +|..+.. -..+..+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~------v~~~~~~ 68 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GIA-----EEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKK------IYSGEYS 68 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHGGG-GGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CCC-----CEEEEEeCCchHHHHHHHHHHHHH-HhcCCeE------EEECCHH
Confidence 5999999999999988776543 442 589999973100000 01222211 2322110 0113467
Q ss_pred HhccCCCcEEEeccCCC---C-----------CCCHHHHHHHhccCCCC
Q 013638 403 VVRKVKPHVLLGLSGVG---G-----------VFNEEVKTYFLCFIPCF 437 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~---G-----------~FteevV~~Ma~~~~~p 437 (439)
++++ +|++|=+.+.| | -+-+++++.|.++++.-
T Consensus 69 a~~~--aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a 115 (318)
T 1ez4_A 69 DCKD--ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDG 115 (318)
T ss_dssp GGTT--CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 7888 99998555443 2 12345666777777654
No 251
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=64.77 E-value=4 Score=40.33 Aligned_cols=135 Identities=13% Similarity=0.160 Sum_probs=77.4
Q ss_pred CCeeEEEEecCceeeccCCCCCCcccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhh
Q 013638 170 QQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYL 249 (439)
Q Consensus 170 ~~v~viVVTDG~rILGLGDlG~~Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~ 249 (439)
...+++||||.+.=|- .- +..--||. .+|+.+-+| +++.+++- +
T Consensus 33 ~~Mki~IvTDSt~dL~------------~e----~~~~~~I~---vvPL~v~~~--~~~Y~D~~---------------d 76 (315)
T 3fys_A 33 GSMNIAVVTDSTAYIP------------KE----MREQHQIH---MIPLQVVFR--EETYREEI---------------E 76 (315)
T ss_dssp -CCCEEEEEEGGGCCC------------HH----HHHHHTEE---EECCEEECS--SCEEEBTT---------------T
T ss_pred CCCcEEEEEECCCCCC------------HH----HHHhCCeE---EEeEEEEEC--CEEEECCC---------------C
Confidence 3457999999985441 11 11122666 899888874 44444331 1
Q ss_pred HhHHHHHHHHHH--hCCce-EEEEecCCCchHHHHHHHHhhc---c--cccccCcchhHHHHHHHHHHHHHHhCCCccCC
Q 013638 250 SIVDEFMEAVHA--RWPKA-IVQFEDFQMKWAFETLERYRKR---F--CMFNDDIQGTAGVALAGLLGTVRAQGLSLTDF 321 (439)
Q Consensus 250 ~~vdefv~av~~--~~P~~-~IqfEDf~~~naf~iL~ryr~~---~--~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl 321 (439)
--.+||.+.+++ ..|+. ....+|| .++| +++.++ + .++.-- |.|-+++.+.....+.+
T Consensus 77 i~~~efy~~m~~~~~~p~TSqPs~~~~--~~~f---e~l~~~~~~Ii~I~iSS~--------LSGTy~sA~~Aa~~~~~- 142 (315)
T 3fys_A 77 LDWKSFYEEVKKHNELPTTSQPPIGEL--VALY---EELGKSYDAVISIHLSSG--------ISGTFSSAAAADSMVDN- 142 (315)
T ss_dssp BCHHHHHHHHHTTTCCCEEECCCHHHH--HHHH---HHHTTTCSEEEEEESCTT--------TCSHHHHHHHGGGGCSS-
T ss_pred CCHHHHHHHHHhCCCCcccCCCCHHHH--HHHH---HHHHhcCCcEEEEeCCCc--------HhHHHHHHHHHHHhCCC-
Confidence 235888888875 35865 4444444 2222 222222 1 233333 44445555555555556
Q ss_pred CCceEEEeCchhHHHHHHHHHHHH--HHHHcCC-Chhhh
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQA--AARMAGN-NDAFA 357 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~--~~~~~Gl-s~eeA 357 (439)
.+|-++=..+++.|..-++..+ |. ++|. |.||.
T Consensus 143 --~~I~ViDS~~~s~g~g~lv~~Aa~l~-~~G~~s~eeI 178 (315)
T 3fys_A 143 --IDVYPFDSEISCLAQGFYALKAAELI-KNGASSPEDI 178 (315)
T ss_dssp --CEEEEEECSSCHHHHHHHHHHHHHHH-HTTCCCHHHH
T ss_pred --CCEEEECCchhHHHHHHHHHHHHHHH-HcCCCCHHHH
Confidence 7888888877777776666654 44 6899 88864
No 252
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=64.64 E-value=3.8 Score=41.00 Aligned_cols=33 Identities=30% Similarity=0.429 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
-+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LGM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 479999999999999977654 343 699999873
No 253
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=64.46 E-value=4 Score=41.02 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~~ 35 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKRG 35 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999977655 353 699999873
No 254
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=64.26 E-value=5.2 Score=39.77 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=28.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|+|+|||.+|+..|..|.+. |- ..++.++++..-
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~~ 40 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGER 40 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCCC
Confidence 7899999999999999988764 41 137888888643
No 255
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=64.23 E-value=3.6 Score=41.64 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.-
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~~ 44 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAAS-----YGA-------KTLLVEAKA 44 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TSC-------CEEEEESSC
T ss_pred CCEEEEcCCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 689999999999999988765 343 699999863
No 256
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=64.17 E-value=3.5 Score=38.17 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=24.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.. .|. ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 579999999999999987654 353 57777653
No 257
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.16 E-value=3.6 Score=41.16 Aligned_cols=32 Identities=34% Similarity=0.492 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LGQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 579999999999999977654 343 69999986
No 258
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=64.11 E-value=3.6 Score=41.52 Aligned_cols=34 Identities=29% Similarity=0.537 Sum_probs=27.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 28 ~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 589999999999999977654 353 6889998654
No 259
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=63.97 E-value=2.6 Score=40.08 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.+|+.+|..|.+.. ..|+ ++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G~-------~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGPL-------YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CCE-------EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCCc-------eEEEEECC
Confidence 37999999999999998876510 0343 68889876
No 260
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=63.83 E-value=4.6 Score=40.28 Aligned_cols=35 Identities=29% Similarity=0.533 Sum_probs=28.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.. .|.. .++.++|+..
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERRG 41 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSSS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecCC
Confidence 689999999999999988764 3542 2789999863
No 261
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=63.79 E-value=4.4 Score=36.74 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=26.3
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
..||.|+|+|..|..+|..+... | .+++++|+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 38999999999999999887653 4 268888864
No 262
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=63.65 E-value=4.8 Score=38.85 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 303 ~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.++..+.|++..+. .. ++|+|+|||..|..++.+... .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SG---KSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TT---CCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33334555543332 44 899999998888777665443 353 25777665
No 263
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=63.59 E-value=4.8 Score=37.26 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=27.4
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+...||.|+|+|..|.++|..+... |. +++++|++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~-----G~-------~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL-----GH-------EVTIGTRD 51 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 3349999999999999999888764 42 68888875
No 264
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=63.52 E-value=17 Score=36.05 Aligned_cols=94 Identities=16% Similarity=0.161 Sum_probs=63.0
Q ss_pred HhCCce-EEEEecCCCchHHHHHHHHhhcccccccCc---chhHHHHHHHHHHHHHHh---------CCC----------
Q 013638 261 ARWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GLS---------- 317 (439)
Q Consensus 261 ~~~P~~-~IqfEDf~~~naf~iL~ryr~~~~~FNDDi---QGTaaV~LAgll~A~r~~---------g~~---------- 317 (439)
+.+|+. .|+.--.+..|- .+-.--+..+.+.|--- ..+|=-+++.+++..|-. |.-
T Consensus 81 ~~~~~Lk~I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~ 159 (347)
T 1mx3_A 81 EKFKALRIIVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREV 159 (347)
T ss_dssp TTCSSCCEEEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHH
T ss_pred hhCCCCCEEEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCccccccccccc
Confidence 456887 888888887773 22222223477777533 345555788899888721 210
Q ss_pred ---ccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 318 ---LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 318 ---l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
..+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|++
T Consensus 160 ~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~ 200 (347)
T 1mx3_A 160 ASGAARIRGETLGIIGLGRVGQAVALRAKAF-----GF-------NVLFYDPY 200 (347)
T ss_dssp TTTCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECTT
T ss_pred ccCccCCCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 1356669999999999999999987643 43 68888864
No 265
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=63.47 E-value=4 Score=41.94 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=28.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|-.|..... .|+ ++.++|+.-
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 689999999999999988766310 353 699999854
No 266
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=63.16 E-value=4.1 Score=41.63 Aligned_cols=33 Identities=24% Similarity=0.539 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
-.|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 579999999999999988765 364 589999864
No 267
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=63.04 E-value=3.3 Score=39.03 Aligned_cols=26 Identities=27% Similarity=0.450 Sum_probs=22.1
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHH
Q 013638 320 DFADQKIVVVGAGSAGLGVLKMAVQA 345 (439)
Q Consensus 320 dl~~~riv~~GAGsAgiGiA~li~~~ 345 (439)
+|++.++||+|+|..|..-|+.|..+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~ 53 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE 53 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC
Confidence 35559999999999999999888775
No 268
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=62.74 E-value=13 Score=36.04 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=23.6
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+++|+|.|||..|..++.+.... |. +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-----Ga-------~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-----GL-------EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 38999999988887776665432 42 67877764
No 269
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=62.73 E-value=3.7 Score=41.28 Aligned_cols=32 Identities=25% Similarity=0.500 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 689999999999999988754 34 379999986
No 270
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=62.70 E-value=3.4 Score=40.41 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=56.8
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc--cc---cccCCCCCChhhhccccccCCcCCCCCC
Q 013638 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD--GL---ITKERKNLDPAAAPFAKDPGDFMGLREG 397 (439)
Q Consensus 324 ~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~--GL---l~~~r~~L~~~k~~fA~~~~~~~~~~~~ 397 (439)
.||+|.|| |..|..++..|+. .|+-..+-...++++|.. .. +.....+|.+.-.++..+- ...
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i------~~~ 74 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGM------TAH 74 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEE------EEE
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcE------EEe
Confidence 69999998 9999998876654 243111112379999975 10 0000001111000121111 112
Q ss_pred CCHHHHhccCCCcEEEeccCCC---CC-----------CCHHHHHHHhccC-CC
Q 013638 398 ASLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVKTYFLCFI-PC 436 (439)
Q Consensus 398 ~sL~eaV~~vkPtvLIG~S~~~---G~-----------FteevV~~Ma~~~-~~ 436 (439)
.++.+++++ .|++|=+.+.+ |- .++++++.+.+++ +.
T Consensus 75 ~~~~~al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~ 126 (329)
T 1b8p_A 75 ADPMTAFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRN 126 (329)
T ss_dssp SSHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred cCcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 568999998 89988555544 31 3567888888886 55
No 271
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=62.56 E-value=4.8 Score=41.33 Aligned_cols=34 Identities=32% Similarity=0.414 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..-
T Consensus 93 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~ 126 (497)
T 2bry_A 93 TKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIK 126 (497)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSS
T ss_pred CCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEeccc
Confidence 689999999999999988765 353 6889987643
No 272
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=62.12 E-value=4.3 Score=41.95 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |+ ++.++|+..
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 6899999999999999887653 54 688998764
No 273
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=62.11 E-value=3.9 Score=41.64 Aligned_cols=22 Identities=36% Similarity=0.613 Sum_probs=19.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQA 345 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~ 345 (439)
.+|+|+|||.||+..|..|.++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHhc
Confidence 6899999999999999998764
No 274
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=62.08 E-value=4.4 Score=41.36 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |. ++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----NA-------KVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCC
Confidence 5799999999999999887653 43 699999864
No 275
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=62.07 E-value=8 Score=38.00 Aligned_cols=68 Identities=22% Similarity=0.181 Sum_probs=46.1
Q ss_pred cccccccCcc---hhHHHHHHHHHHHHHH---------hC------CCccCCCCceEEEeCchhHHHHHHHHHHHHHHHH
Q 013638 288 RFCMFNDDIQ---GTAGVALAGLLGTVRA---------QG------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (439)
Q Consensus 288 ~~~~FNDDiQ---GTaaV~LAgll~A~r~---------~g------~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~ 349 (439)
.+.+.|---- .+|=-+++.+|+..|- .| ..-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 93 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~---- 168 (333)
T 1j4a_A 93 GFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF---- 168 (333)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT----
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 4777664333 3444578888887762 12 111345569999999999999999988653
Q ss_pred cCCChhhhcCeEEEEecc
Q 013638 350 AGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 350 ~Gls~eeA~~~i~lvDs~ 367 (439)
|+ +++.+|+.
T Consensus 169 -G~-------~V~~~d~~ 178 (333)
T 1j4a_A 169 -GA-------KVITYDIF 178 (333)
T ss_dssp -TC-------EEEEECSS
T ss_pred -CC-------EEEEECCC
Confidence 43 68888874
No 276
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=61.87 E-value=4.5 Score=40.70 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~V~lie~~ 37 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQL-----GI-------PTVLVEGQ 37 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEccC
Confidence 5799999999999999776553 43 79999983
No 277
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=61.55 E-value=3.7 Score=37.97 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=23.8
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.|+|+|||.||+..|..+.. .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 59999999999999866543 454 57788864
No 278
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=61.46 E-value=3.4 Score=38.56 Aligned_cols=38 Identities=18% Similarity=0.233 Sum_probs=24.4
Q ss_pred cCCCCceEEEeCch-h--HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 319 TDFADQKIVVVGAG-S--AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 319 ~dl~~~riv~~GAG-s--AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|++.++||.||. . .|.++|+.+.+ .|. +++++|+.-
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~ 62 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHR-----EGA-------ELAFTYVGQ 62 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHH-----TTC-------EEEEEECTT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHH-----cCC-------EEEEeeCch
Confidence 34555899999973 3 45555555543 453 688888864
No 279
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=61.45 E-value=5 Score=40.35 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |+ ++.++|+..
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 38 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQL-----GF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 5799999999999999887653 53 699999853
No 280
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=61.38 E-value=4.6 Score=39.96 Aligned_cols=33 Identities=27% Similarity=0.551 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.+|+..|..+.+. | .++.++|+..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEecC
Confidence 6899999999999999887653 4 3688888753
No 281
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=61.20 E-value=4.7 Score=40.57 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=27.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
-.|+|+|||.||+..|..+.+ .|+ ++.++|++.-
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~~ 38 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKGE 38 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTSS
T ss_pred ceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCCC
Confidence 579999999999999988754 354 6999996553
No 282
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=61.18 E-value=12 Score=36.50 Aligned_cols=47 Identities=23% Similarity=0.350 Sum_probs=30.1
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
...+.|++..+..... ++|+|.|||..|..++.+... .|. +++.+|+
T Consensus 173 ~ta~~al~~~~~~~~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 173 ITVYSPLKYFGLDEPG---KHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHhcCcCCCC---CEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3345666665544244 799999999877777655433 342 5777765
No 283
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=61.07 E-value=4.9 Score=40.40 Aligned_cols=32 Identities=34% Similarity=0.617 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..|.++ |. ++.++++.
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 7999999999999999888664 43 68888876
No 284
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=60.52 E-value=5.4 Score=39.88 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=28.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|||+|||.||+..|..+.+ .|.+ .+|.++|+..-
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~~ 40 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDATV 40 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCCS
T ss_pred CcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCCC
Confidence 689999999999999988765 3542 37999987643
No 285
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=60.48 E-value=5 Score=43.33 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+... |. ++.++|+..
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~~-----G~-------~Vtlie~~~ 422 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLMES-----GY-------TVHLTDTAE 422 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 6899999999999999887653 43 699999864
No 286
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=60.48 E-value=3.9 Score=42.64 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=27.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 689999999999999988862 2354 689999864
No 287
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=60.44 E-value=11 Score=39.39 Aligned_cols=87 Identities=16% Similarity=0.222 Sum_probs=48.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhcccccc-CCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDP-GDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~-~~~~~~~~~~sL~e 402 (439)
.+|.|+|+|..|.++|..+... |. +++++|+.-= .-..++... .. .......++.|
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~~----------~~~~l~~~g~~g-~~i~~~~s~~e 61 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTVS----------KVDDFLANEAKG-TKVVGAQSLKE 61 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSTH----------HHHHHHHTTTTT-SSCEECSSHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCHH----------HHHHHHhcccCC-CceeccCCHHH
Confidence 6899999999999999887664 53 5788886311 111111110 00 00001246777
Q ss_pred HhccC-CCcEEEeccCCCCCCCHHHHHHHhccC
Q 013638 403 VVRKV-KPHVLLGLSGVGGVFNEEVKTYFLCFI 434 (439)
Q Consensus 403 aV~~v-kPtvLIG~S~~~G~FteevV~~Ma~~~ 434 (439)
+++.+ +||++| ++-.++..++++++.+.++.
T Consensus 62 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L 93 (484)
T 4gwg_A 62 MVSKLKKPRRII-LLVKAGQAVDDFIEKLVPLL 93 (484)
T ss_dssp HHHTBCSSCEEE-ECSCSSHHHHHHHHHHGGGC
T ss_pred HHhhccCCCEEE-EecCChHHHHHHHHHHHHhc
Confidence 77642 367665 23223445566666666553
No 288
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=60.33 E-value=5.6 Score=40.51 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+... |- ..+|.++|+.
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred ceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 6899999999999999988764 31 1479999986
No 289
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=60.25 E-value=6.8 Score=40.76 Aligned_cols=35 Identities=31% Similarity=0.535 Sum_probs=20.1
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+++.+++|.|||.+|.++|..+.+ .|. +++++++.
T Consensus 362 l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 362 LASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp ----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 334899999998555555555443 453 47777763
No 290
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=59.77 E-value=5.3 Score=40.37 Aligned_cols=32 Identities=25% Similarity=0.441 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 38 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERY 38 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 579999999999999977654 353 69999984
No 291
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=59.73 E-value=8.5 Score=39.62 Aligned_cols=32 Identities=13% Similarity=0.243 Sum_probs=25.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|.|+|+|..|..+|..+... |. +++++|+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999887653 43 57888763
No 292
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=59.69 E-value=5.3 Score=37.33 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=24.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
--++|+|||.||+..|-.+. +.|+ ++.++|+.
T Consensus 7 yDVvIIGaGpAGlsAA~~la-----r~g~-------~v~lie~~ 38 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLG-----RARK-------QIALFDNN 38 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEEECS
T ss_pred cCEEEECCCHHHHHHHHHHH-----HCCC-------CEEEEeCC
Confidence 45899999999998875443 3454 68899974
No 293
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=59.68 E-value=14 Score=36.45 Aligned_cols=48 Identities=19% Similarity=0.192 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++..+.|++..+.+.. ++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 171 ~~ta~~al~~~~~~~g----~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 218 (398)
T 2dph_A 171 LPTGFHGCVSAGVKPG----SHVYIAGAGPVGRCAAAGARL-----LGA------ACVIVGDQ 218 (398)
T ss_dssp HHHHHHHHHHTTCCTT----CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred HHHHHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEEcC
Confidence 3444556655444433 699999999888776655433 243 36777774
No 294
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=59.64 E-value=6.7 Score=38.21 Aligned_cols=92 Identities=18% Similarity=0.200 Sum_probs=54.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCC-CCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r-~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||.|+|||..|.++|..++.. |+- ..++|+|.+-= ..+. .++.+ +..+ .. ....++ +
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~~-----~ev~L~Di~~~-~~g~a~dl~~----~~~~--~i---~~t~d~-~ 73 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GIA-----DRLVLLDLSEG-TKGATMDLEI----FNLP--NV---EISKDL-S 73 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECCC------CHHHHHH----HTCT--TE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CCC-----CEEEEEcCCcc-hHHHHHHHhh----hcCC--Ce---EEeCCH-H
Confidence 6899999999999999988543 442 57999998531 1111 01211 1111 11 012456 7
Q ss_pred HhccCCCcEEEeccCCC--CC-----------CCHHHHHHHhccCCCCC
Q 013638 403 VVRKVKPHVLLGLSGVG--GV-----------FNEEVKTYFLCFIPCFI 438 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~--G~-----------FteevV~~Ma~~~~~pi 438 (439)
+++. +|++|=..+.+ |- +-+++++.|.++++.-|
T Consensus 74 ~l~~--aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~ 120 (303)
T 2i6t_A 74 ASAH--SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSV 120 (303)
T ss_dssp GGTT--CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHCC--CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 7888 99998554432 21 23577888888876543
No 295
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=59.52 E-value=9 Score=37.70 Aligned_cols=69 Identities=22% Similarity=0.197 Sum_probs=45.6
Q ss_pred cccccccCcch---hHHHHHHHHHHHHHH----------------hCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHH
Q 013638 288 RFCMFNDDIQG---TAGVALAGLLGTVRA----------------QGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (439)
Q Consensus 288 ~~~~FNDDiQG---TaaV~LAgll~A~r~----------------~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~ 348 (439)
.+.+.|=--.. +|=-+++.+|+..|- .+..-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 91 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~--- 167 (333)
T 1dxy_A 91 GIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF--- 167 (333)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC---
Confidence 36666643233 344468888877651 11112345559999999999999999988654
Q ss_pred HcCCChhhhcCeEEEEeccc
Q 013638 349 MAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 349 ~~Gls~eeA~~~i~lvDs~G 368 (439)
|+ +++.+|+..
T Consensus 168 --G~-------~V~~~d~~~ 178 (333)
T 1dxy_A 168 --GA-------KVIAYDPYP 178 (333)
T ss_dssp --TC-------EEEEECSSC
T ss_pred --CC-------EEEEECCCc
Confidence 43 688888753
No 296
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=59.49 E-value=5.5 Score=40.30 Aligned_cols=32 Identities=22% Similarity=0.464 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~ 58 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGA-----LGK-------RVAIAEEY 58 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CcC-------EEEEEeCC
Confidence 589999999999999988765 353 69999984
No 297
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=59.42 E-value=5.2 Score=41.02 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=29.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHH-------HcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAAR-------MAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~-------~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||...|-.|...... ..|+ ++.++++.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 6899999999999999988774310 0354 689999864
No 298
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=59.27 E-value=5.6 Score=37.02 Aligned_cols=32 Identities=38% Similarity=0.472 Sum_probs=25.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----GN-------DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEECC
Confidence 4899999999999999887653 42 67777764
No 299
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=59.15 E-value=19 Score=35.67 Aligned_cols=87 Identities=14% Similarity=0.183 Sum_probs=49.4
Q ss_pred HHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccc
Q 013638 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA 385 (439)
Q Consensus 306 gll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA 385 (439)
|.+++..... ... .++.|+|+|..|-.++..+... .+. ++++++|+. .++ .......|.
T Consensus 117 s~laa~~la~--~~~---~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~--a~~la~~~~ 175 (350)
T 1x7d_A 117 SLMAAQALAR--PNA---RKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA--TAKLIANLK 175 (350)
T ss_dssp HHHHHHHHSC--TTC---CEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH--HHHHHHHHT
T ss_pred HHHHHHHhcc--ccC---CeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH--HHHHHHHHH
Confidence 4455544432 345 7999999999999988766542 233 578888873 111 111222221
Q ss_pred cccCCcCCCCCCCCHHHHhccCCCcEEEeccC
Q 013638 386 KDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (439)
Q Consensus 386 ~~~~~~~~~~~~~sL~eaV~~vkPtvLIG~S~ 417 (439)
... ... .....++.|+++. +|++|-++.
T Consensus 176 ~~~-g~~-~~~~~~~~eav~~--aDiVi~aTp 203 (350)
T 1x7d_A 176 EYS-GLT-IRRASSVAEAVKG--VDIITTVTA 203 (350)
T ss_dssp TCT-TCE-EEECSSHHHHHTT--CSEEEECCC
T ss_pred hcc-Cce-EEEeCCHHHHHhc--CCEEEEecc
Confidence 100 000 0113578999987 899987655
No 300
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=58.98 E-value=3.7 Score=38.90 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.+|+.+|-.|. . |. ++.++|+..
T Consensus 10 ~dv~IIGaGi~Gls~A~~La-~-----G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 10 ADYLVIGAGIAGASTGYWLS-A-----HG-------RVVVLEREA 41 (381)
T ss_dssp CSEEEECCSHHHHHHHHHHT-T-----TS-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHh-C-----CC-------CEEEEECCC
Confidence 68999999999999998875 2 43 699999874
No 301
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=58.84 E-value=5.8 Score=36.52 Aligned_cols=31 Identities=26% Similarity=0.267 Sum_probs=25.1
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||.|+|+|..|..+|..+..+ |. +++++|+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----GH-------EVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred eEEEECcCHHHHHHHHHHHhC-----CC-------CEEEEEcC
Confidence 799999999999999888653 42 68888764
No 302
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=58.84 E-value=4.8 Score=37.81 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.||+..|..+.+. .|+ ++.++|+..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~----~G~-------~V~viEk~~ 73 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKN----PNV-------QVAIIEQSV 73 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS----TTS-------CEEEEESSS
T ss_pred cCEEEECccHHHHHHHHHHHHc----CCC-------eEEEEECCC
Confidence 6899999999999999876541 143 688888764
No 303
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=58.65 E-value=6 Score=38.12 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|+.|..+|..+..+ | .+++++|+.
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCC
Confidence 7999999999999999988764 3 268888874
No 304
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=58.52 E-value=5.6 Score=40.34 Aligned_cols=35 Identities=26% Similarity=0.490 Sum_probs=27.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
.+|+|+|||.||+..|..|.+. |. ++.++++..-+
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCCCC
Confidence 5899999999999999988763 43 68888876444
No 305
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=58.51 E-value=4.3 Score=40.53 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
-.|+|+|||.||+..|..+.+ .|. ++.++|+.--
T Consensus 5 ~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 579999999999999987654 353 6889998653
No 306
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=58.32 E-value=5.6 Score=40.84 Aligned_cols=33 Identities=30% Similarity=0.420 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.||+..|-.|.. .|+ ++.++|+.-
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~~ 44 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERLV 44 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESCC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 789999999999999988765 354 577788653
No 307
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=58.29 E-value=13 Score=36.53 Aligned_cols=48 Identities=23% Similarity=0.241 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++..+.|++..+.+. . ++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 171 ~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlAk~-----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 171 LPTGYHGAVTAGVGP-G---STVYVAGAGPVGLAAAASARL-----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHHHHHHcCCCC-C---CEEEEECCcHHHHHHHHHHHH-----CCC------CeEEEEcC
Confidence 344556666444433 3 699999999877766554432 353 36777765
No 308
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=58.29 E-value=5.3 Score=39.91 Aligned_cols=22 Identities=32% Similarity=0.418 Sum_probs=18.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQA 345 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~ 345 (439)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999887654
No 309
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=58.24 E-value=7.1 Score=39.88 Aligned_cols=31 Identities=35% Similarity=0.474 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvD 365 (439)
.+|+|+|||.||+..|..+.+. .|. ++.++|
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 38 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATL----YGK-------RVAVVD 38 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred cCEEEECCChhHHHHHHHHHHh----cCC-------eEEEEe
Confidence 6899999999999999888661 243 799999
No 310
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=58.09 E-value=6.8 Score=39.29 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
-.|+|+|||.||+..|..+.+. |. ++.++|+.-
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~~ 36 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQL-----GL-------KTALIEKYK 36 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECCB
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC-------EEEEEeCCC
Confidence 5799999999999999887653 43 699999863
No 311
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=58.08 E-value=9.6 Score=37.87 Aligned_cols=33 Identities=33% Similarity=0.661 Sum_probs=25.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
--|+|+|||-||+..|..|.++ .|. ++.++++.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~----~G~-------~V~VlE~~ 43 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI----DGP-------SWMIVDSN 43 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----CCS-------CEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHHHhh----CCC-------CEEEEECC
Confidence 4699999999999999988663 353 46666654
No 312
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=58.04 E-value=5 Score=41.01 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=28.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
..|+|+|||.||+..|-.|.. .|+ ++.++|+.--+
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~~~ 40 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRPGL 40 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCCC
Confidence 689999999999999987755 464 58889987543
No 313
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=58.01 E-value=5.8 Score=38.68 Aligned_cols=34 Identities=32% Similarity=0.581 Sum_probs=26.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |. .++.++++..
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~~ 40 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERTD 40 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECCC
Confidence 6899999999999999888653 41 2577777643
No 314
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=57.99 E-value=7.2 Score=37.55 Aligned_cols=31 Identities=23% Similarity=0.550 Sum_probs=24.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
+||-|+|-|..|.++|..|+++ |. +++.+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 5899999999999999998764 43 5777775
No 315
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=57.90 E-value=4.7 Score=41.20 Aligned_cols=33 Identities=21% Similarity=0.590 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|-.+.. .|+ ++.++|+.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 689999999999999987654 454 688999875
No 316
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=57.84 E-value=5.6 Score=40.00 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=26.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |. ++.++|+.-
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~-----G~-------~V~liE~~~ 53 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAEL-----GA-------RAAVVESHK 53 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecCC
Confidence 6899999999999999887653 53 689999653
No 317
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=57.61 E-value=5.9 Score=38.82 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.+||..+..+ |. +++++|.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 6899999999999999988764 54 58888864
No 318
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=57.61 E-value=13 Score=35.59 Aligned_cols=51 Identities=10% Similarity=-0.008 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 302 V~LAgll~A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.++..+.|++....--.. ++++|.|| |..|..++.++.. .|. +++.+|+.
T Consensus 128 ~~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~-----~G~-------~Vi~~~~~ 179 (333)
T 1wly_A 128 LKGMTAQYLLHQTHKVKPG---DYVLIHAAAGGMGHIMVPWARH-----LGA-------TVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEETTTTSTTHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hhHHHHHHHHHHhhCCCCC---CEEEEECCccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 3444555566533322234 79999996 8888877766554 342 57777763
No 319
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=57.39 E-value=6.3 Score=40.41 Aligned_cols=33 Identities=30% Similarity=0.431 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.||+..|-.|.. .|+ ++.++|+.-
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~~ 45 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQLP 45 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESCS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 789999999999999988765 355 577888753
No 320
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=57.26 E-value=7.8 Score=38.81 Aligned_cols=32 Identities=34% Similarity=0.596 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.+|+..|..+.+. |. ++.++++.
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~-----g~-------~v~vlE~~ 65 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGA-----GH-------QVTVLEAS 65 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH-----TC-------EEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 6899999999999999988764 42 57777765
No 321
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=57.23 E-value=5.4 Score=40.02 Aligned_cols=34 Identities=32% Similarity=0.538 Sum_probs=27.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
..|+|+|||.||+..|-.+.+ .|. ++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 579999999999999987654 353 6999998653
No 322
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=57.14 E-value=6.5 Score=38.91 Aligned_cols=33 Identities=21% Similarity=0.436 Sum_probs=25.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+. .|. ++.++++.
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~----~g~-------~v~v~E~~ 40 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQ----LDK-------RVLVLERR 40 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH----SCC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh----CCC-------CEEEEeCC
Confidence 6899999999999999988764 132 56677665
No 323
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=57.02 E-value=3.5 Score=39.84 Aligned_cols=95 Identities=16% Similarity=0.205 Sum_probs=54.2
Q ss_pred eEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec--cc-ccccCCCCCChhhhccccccCCcCCCCCCCCH
Q 013638 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DG-LITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (439)
Q Consensus 325 riv~~G-AGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs--~G-Ll~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL 400 (439)
||+|.| ||..|..++..|+. .|+- ..++|+|. +- .+.....+|.+... +..+.. . ...+
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~-v----~~~~- 64 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDIA-----DEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTR-V----RQGG- 64 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTCC-----SEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCE-E----EECC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcE-E----EeCC-
Confidence 899999 99999998887654 2432 46999997 21 00000012222111 111110 0 0122
Q ss_pred HHHhccCCCcEEEeccCCC---CC-----------CCHHHHHHHhccCCCCC
Q 013638 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVKTYFLCFIPCFI 438 (439)
Q Consensus 401 ~eaV~~vkPtvLIG~S~~~---G~-----------FteevV~~Ma~~~~~pi 438 (439)
.+++++ +|++|=+.+.+ |- .++++++.+.++++..+
T Consensus 65 ~~a~~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~ 114 (303)
T 1o6z_A 65 YEDTAG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYI 114 (303)
T ss_dssp GGGGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCE
T ss_pred HHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcE
Confidence 677887 99988665544 32 46778888888877654
No 324
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=56.92 E-value=6.4 Score=39.40 Aligned_cols=32 Identities=31% Similarity=0.490 Sum_probs=25.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999888663 43 46666665
No 325
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=56.77 E-value=5.8 Score=42.18 Aligned_cols=33 Identities=36% Similarity=0.567 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..+.. .|. ++.++|+..
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~-----~g~-------~V~lie~~~ 406 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAA-----RGH-------QVTLFDAHS 406 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 689999999999999988754 343 699999864
No 326
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=56.75 E-value=15 Score=35.37 Aligned_cols=33 Identities=9% Similarity=0.252 Sum_probs=26.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.+|.|+|+|..|..+|..+... .|. ++++++|+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr 168 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNR 168 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECS
T ss_pred cEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcC
Confidence 7999999999999998887653 243 47888886
No 327
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=56.67 E-value=7.8 Score=37.13 Aligned_cols=34 Identities=24% Similarity=0.536 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|||+.|.++|..+... |+. ..++++|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~~-----~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GVA-----DDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEcCC
Confidence 3899999999999998888653 541 479999985
No 328
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=56.63 E-value=6.1 Score=38.88 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |. ++.++++..
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 38 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARD 38 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 6899999999999999887653 43 577888763
No 329
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=56.59 E-value=4.7 Score=39.11 Aligned_cols=35 Identities=29% Similarity=0.535 Sum_probs=28.1
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
|++.+|||+|+|..|..-|+.|+.+. .++.++|.+
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~G------------a~VtViap~ 45 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTG------------CKLTLVSPD 45 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGT------------CEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCC------------CEEEEEcCC
Confidence 44599999999999999999887753 268888864
No 330
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=56.59 E-value=12 Score=37.04 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=28.8
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 320 dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+|.+.+|.|+|.|..|..+|+.+..+ .|+ +++.+|+.
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~ 196 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVA 196 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCC
Confidence 45559999999999999999987621 243 68888875
No 331
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=56.54 E-value=6.7 Score=35.22 Aligned_cols=31 Identities=13% Similarity=0.382 Sum_probs=25.2
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||+|+|+|..|..+|+.+... |. +++++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----KY-------GVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 799999999999999887653 43 68888863
No 332
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=56.53 E-value=5.7 Score=40.79 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=19.4
Q ss_pred eEEEeCchhHHHHHHHHHHHHHH
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAA 347 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~ 347 (439)
-||++|||.+|+++|-.|.+...
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~ 63 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALD 63 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHC
T ss_pred cEEEEcccHHHHHHHHHHHhcCC
Confidence 38999999999999988876543
No 333
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=55.94 E-value=15 Score=31.78 Aligned_cols=47 Identities=15% Similarity=0.203 Sum_probs=35.4
Q ss_pred hcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCceEEEE
Q 013638 207 AAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQF 270 (439)
Q Consensus 207 ~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~~P~~~Iqf 270 (439)
.+.-+|+- |+|..|||+- ..+-++|.+-++++|+.+++..|++.|-|
T Consensus 70 ~~~~~pd~---Vvi~~G~ND~--------------~~~~~~~~~~l~~ii~~l~~~~p~~~ii~ 116 (200)
T 4h08_A 70 LKNTKFDV---IHFNNGLHGF--------------DYTEEEYDKSFPKLIKIIRKYAPKAKLIW 116 (200)
T ss_dssp HHHSCCSE---EEECCCSSCT--------------TSCHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HhcCCCCe---EEEEeeeCCC--------------CCCHHHHHHHHHHHHHHHhhhCCCccEEE
Confidence 34455543 6889999851 34679999999999999999999874443
No 334
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=55.93 E-value=24 Score=33.79 Aligned_cols=90 Identities=10% Similarity=-0.003 Sum_probs=48.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
.||.|+|+|..|-..++.+... .+. +-+.++|++ .+... .++....- .....++.|+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~----~~~------~~~av~d~~------~~~~~----~~a~~~~~---~~~~~~~~~l 62 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA----GNG------EVVAVSSRT------LESAQ----AFANKYHL---PKAYDKLEDM 62 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH----CSE------EEEEEECSC------SSTTC----C---CCCC---SCEESCHHHH
T ss_pred eEEEEEechHHHHHHHHHHHhC----CCc------EEEEEEcCC------HHHHH----HHHHHcCC---CcccCCHHHH
Confidence 7999999998876655544321 121 123355652 11121 22322110 0124679999
Q ss_pred hccCCCcEEEeccCCCCCCCHHHHHHHhcc-----CCCCC
Q 013638 404 VRKVKPHVLLGLSGVGGVFNEEVKTYFLCF-----IPCFI 438 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~G~FteevV~~Ma~~-----~~~pi 438 (439)
++.-++|+++ +++ |.....++++...+. |+||+
T Consensus 63 l~~~~~D~V~-i~t-p~~~h~~~~~~al~aGk~Vl~EKP~ 100 (329)
T 3evn_A 63 LADESIDVIY-VAT-INQDHYKVAKAALLAGKHVLVEKPF 100 (329)
T ss_dssp HTCTTCCEEE-ECS-CGGGHHHHHHHHHHTTCEEEEESSC
T ss_pred hcCCCCCEEE-ECC-CcHHHHHHHHHHHHCCCeEEEccCC
Confidence 9976789888 444 555666666554432 56665
No 335
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=55.88 E-value=13 Score=36.23 Aligned_cols=32 Identities=28% Similarity=0.501 Sum_probs=22.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999999877766555433 354 36888874
No 336
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.49 E-value=7 Score=38.20 Aligned_cols=33 Identities=30% Similarity=0.530 Sum_probs=26.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.++||+|||.||+..|..+.+ .| ++.++|+.-.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCC
Confidence 589999999999999988743 23 7899998754
No 337
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=55.43 E-value=15 Score=38.69 Aligned_cols=36 Identities=11% Similarity=0.369 Sum_probs=28.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||||+|||+.|-++|.+|++- .++.. .+|.+.|+.
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~----~dv~~----~~I~vaD~~ 49 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK----FDIKP----SQVTIIAAE 49 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH----BCCCG----GGEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHhC----CCCce----eEEEEeccc
Confidence 5999999999999999999773 44432 367888763
No 338
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=55.30 E-value=10 Score=36.98 Aligned_cols=67 Identities=22% Similarity=0.192 Sum_probs=45.3
Q ss_pred cccccccCc---chhHHHHHHHHHHHHHHh---------CC---------CccCCCCceEEEeCchhHHHHHHHHHHHHH
Q 013638 288 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAA 346 (439)
Q Consensus 288 ~~~~FNDDi---QGTaaV~LAgll~A~r~~---------g~---------~l~dl~~~riv~~GAGsAgiGiA~li~~~~ 346 (439)
.+.+.|--- +.+|=-+++.+|+..|-. |. .-.+|.+.+|.|+|.|..|-.+|+.+...
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~- 168 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF- 168 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT-
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC-
Confidence 366666543 334445788888877632 10 11356669999999999999999987643
Q ss_pred HHHcCCChhhhcCeEEEEec
Q 013638 347 ARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 347 ~~~~Gls~eeA~~~i~lvDs 366 (439)
|. +++.+|+
T Consensus 169 ----G~-------~V~~~d~ 177 (320)
T 1gdh_A 169 ----DM-------DIDYFDT 177 (320)
T ss_dssp ----TC-------EEEEECS
T ss_pred ----CC-------EEEEECC
Confidence 42 6888887
No 339
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=55.11 E-value=7.6 Score=36.89 Aligned_cols=35 Identities=31% Similarity=0.406 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.||.|+|||+.|..+|..+.. .|.- ..++++|++-
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~-----~g~~-----~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ-----RGIA-----REIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCh
Confidence 589999999999999887754 3431 3799999863
No 340
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=55.09 E-value=6.8 Score=37.87 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=25.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.||.|+|||+.|..+|..+..+ |. +++++|+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-----g~-------~V~~~~r 34 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-----GE-------AINVLAR 34 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEC
Confidence 6999999999999999888664 32 5777776
No 341
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=54.92 E-value=6.5 Score=41.72 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.||+.+|-.+.+ .|. ++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR-----RGW-------QVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 589999999999999987755 353 799999864
No 342
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=54.91 E-value=9.2 Score=37.49 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=28.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.||.|+|+|..|.++|..+..+... .. .-..+++++|+..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~-~~----~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKN-NY----LFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHH-CT----TBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCc-cC----CCCCeEEEEECCh
Confidence 4899999999999999999876421 00 0003688888753
No 343
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=54.89 E-value=7.6 Score=37.09 Aligned_cols=32 Identities=22% Similarity=0.365 Sum_probs=25.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g~-------~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----GQ-------SVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 6899999999999999887553 42 57778764
No 344
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=54.80 E-value=3.8 Score=37.41 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=23.8
Q ss_pred CCCCceEEEeCch---hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 320 DFADQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 320 dl~~~riv~~GAG---sAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
++++.++||.||+ ..|.++|+.+.+ .|. +++++|+.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~-------~V~~~~r~ 49 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKR-----EGA-------ELAFTYVG 49 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCC-------CEEEEecc
Confidence 3445999999984 345555555543 453 68888876
No 345
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=54.74 E-value=6.6 Score=40.67 Aligned_cols=33 Identities=9% Similarity=0.354 Sum_probs=26.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.||+..|-.+.. .|+ ++.++|+.-
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~~ 59 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQTD 59 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 579999999999999988765 354 588888764
No 346
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=54.73 E-value=14 Score=34.72 Aligned_cols=71 Identities=17% Similarity=0.204 Sum_probs=40.8
Q ss_pred CCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCC
Q 013638 320 DFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (439)
Q Consensus 320 dl~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~ 398 (439)
+++..+|+|.|| |-.|-.+++.|++ .|. +++.+|+.- ....+ .+..- +. .+..
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~~~~~-----~~~~~--Dl---~d~~ 69 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRT-----QGR-------TVRGFDLRP----SGTGG-----EEVVG--SL---EDGQ 69 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEESSC----CSSCC-----SEEES--CT---TCHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCC----CCCCc-----cEEec--Cc---CCHH
Confidence 344589999998 8888888877765 353 688887742 11111 11111 00 1223
Q ss_pred CHHHHhccCCCcEEEeccCC
Q 013638 399 SLLEVVRKVKPHVLLGLSGV 418 (439)
Q Consensus 399 sL~eaV~~vkPtvLIG~S~~ 418 (439)
++.+++++ +|++|=+.+.
T Consensus 70 ~~~~~~~~--~d~vih~A~~ 87 (347)
T 4id9_A 70 ALSDAIMG--VSAVLHLGAF 87 (347)
T ss_dssp HHHHHHTT--CSEEEECCCC
T ss_pred HHHHHHhC--CCEEEECCcc
Confidence 57888885 9999977664
No 347
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=54.64 E-value=6.5 Score=41.16 Aligned_cols=34 Identities=26% Similarity=0.470 Sum_probs=27.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
..|+|+|||.+|+++|..+.. .|+ ++.++|+..+
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~~ 66 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQDF 66 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 579999999999999988765 364 5899997643
No 348
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=54.52 E-value=12 Score=35.54 Aligned_cols=36 Identities=14% Similarity=0.383 Sum_probs=28.1
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
..||.|+|+|..|.++|..+.. .|.+. .+|+++|++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~-----~g~~~----~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA-----NGYDP----NRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH-----TTCCG----GGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHH-----CCCCC----CeEEEEeCC
Confidence 3789999999999999988765 35432 468888874
No 349
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=54.49 E-value=3.6 Score=41.10 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=26.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
.+|+|+|||.||+..|..+.. .|+ ++.++|+.-.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 579999999999999887654 454 5778887543
No 350
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=54.36 E-value=4.5 Score=39.57 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=55.4
Q ss_pred ceEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccC--CcCCCCCCCCH
Q 013638 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG--DFMGLREGASL 400 (439)
Q Consensus 324 ~riv~~G-AGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~--~~~~~~~~~sL 400 (439)
.||+|.| +|..|..++..|.. .|+- ..++++|.+-- .+ ....+.+... .........++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~~-----~ev~l~Di~~~--~~------~~~dL~~~~~~~~v~~~~~t~d~ 70 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPLV-----SVLHLYDVVNA--PG------VTADISHMDTGAVVRGFLGQQQL 70 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTTE-----EEEEEEESSSH--HH------HHHHHHTSCSSCEEEEEESHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEeCCCc--Hh------HHHHhhcccccceEEEEeCCCCH
Confidence 5899999 79999998877643 3431 46999996421 00 0001111000 00000011257
Q ss_pred HHHhccCCCcEEEeccCCC---C-----------CCCHHHHHHHhccCCCCC
Q 013638 401 LEVVRKVKPHVLLGLSGVG---G-----------VFNEEVKTYFLCFIPCFI 438 (439)
Q Consensus 401 ~eaV~~vkPtvLIG~S~~~---G-----------~FteevV~~Ma~~~~~pi 438 (439)
.+++++ +|++|=+.+.+ | -.++++++.+.++++..+
T Consensus 71 ~~al~g--aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~ 120 (326)
T 1smk_A 71 EAALTG--MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 120 (326)
T ss_dssp HHHHTT--CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHcCC--CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 889998 99998555444 3 246778888888876643
No 351
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=54.27 E-value=6 Score=38.49 Aligned_cols=34 Identities=18% Similarity=0.431 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+ .|.+ -+|.++|+.
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~-----~g~~-----~~V~lie~~ 38 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRK-----LDGE-----TPLLMITAD 38 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-----TCSS-----SCEEEECSS
T ss_pred CcEEEECChHHHHHHHHHHHh-----hCCC-----CCEEEEECC
Confidence 689999999999999988754 3532 357778764
No 352
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=54.21 E-value=8.9 Score=39.01 Aligned_cols=31 Identities=32% Similarity=0.429 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEe
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvD 365 (439)
.+|+|+|||.||+..|..+.+. .|. ++.++|
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 34 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASL----HKK-------RVAVID 34 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHH----cCC-------EEEEEe
Confidence 6899999999999999988661 243 699999
No 353
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=54.19 E-value=6.7 Score=44.22 Aligned_cols=34 Identities=24% Similarity=0.477 Sum_probs=27.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.. .|. +++.++|++.
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~-----~G~------~~Vtv~E~~~ 221 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLAR-----LGY------SDITIFEKQE 221 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCC------CcEEEEeCCC
Confidence 689999999999999998765 353 2699999863
No 354
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=54.15 E-value=5.8 Score=39.35 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=25.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.+|+..|..|.+. |. ++.++++..
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~~-----g~-------~v~v~E~~~ 49 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRSR-----GT-------DAVLLESSA 49 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHTT-----TC-------CEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEEcCC
Confidence 5899999999999999887653 43 566777653
No 355
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=54.09 E-value=15 Score=35.43 Aligned_cols=56 Identities=18% Similarity=0.212 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHH-HHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 298 GTAGVALAGLLGTV-RAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 298 GTaaV~LAgll~A~-r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++-...++..+.|+ +..+.+... .++++|.|| |..|..++.++.. .|. ++++.+|+
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~--~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~ 194 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGS--NKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICG 194 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTS--CCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HhcccHHHHHHHHHHHhcCCCCCC--ccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeC
Confidence 33334455556666 444443330 049999998 8888777665543 353 36777776
No 356
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=54.09 E-value=9.2 Score=35.46 Aligned_cols=35 Identities=23% Similarity=0.437 Sum_probs=23.5
Q ss_pred CCCceEEEeCchh---HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 321 FADQKIVVVGAGS---AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 321 l~~~riv~~GAGs---AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
|+++++||-||++ .|.+||+.+.+ +|. +++++|++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~-----~Ga-------~Vvi~~r~ 41 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQ-----LGA-------KLVFTYRK 41 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5559999999853 44445555443 564 78999875
No 357
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=54.04 E-value=7.8 Score=35.12 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=25.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 689999999999999988754 343 57777764
No 358
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=54.02 E-value=16 Score=34.73 Aligned_cols=51 Identities=18% Similarity=0.196 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 301 GVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 301 aV~LAgll~A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.+.++..+.|+.....--.. ++|+|.|| |..|..++.++.. .|. +++.+|+
T Consensus 131 ~~~~~tA~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 182 (336)
T 4b7c_A 131 GMTGMTAYFALLDVGQPKNG---ETVVISGAAGAVGSVAGQIARL-----KGC-------RVVGIAG 182 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 34455566667333332234 69999999 8888777665543 343 5777764
No 359
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=53.89 E-value=7.3 Score=40.50 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.|||..+..+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 5899999999999999888764 44 57777763
No 360
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=53.80 E-value=20 Score=34.76 Aligned_cols=45 Identities=16% Similarity=0.302 Sum_probs=28.5
Q ss_pred HHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 306 gll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
..+.|++..+.+. . ++|+|+|||..|...+.+.... |. +++.+|+
T Consensus 167 ta~~~l~~~~~~~-g---~~VlV~GaG~vG~~~~qlak~~-----Ga-------~Vi~~~~ 211 (360)
T 1piw_A 167 TVYSPLVRNGCGP-G---KKVGIVGLGGIGSMGTLISKAM-----GA-------ETYVISR 211 (360)
T ss_dssp HHHHHHHHTTCST-T---CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEES
T ss_pred HHHHHHHHcCCCC-C---CEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcC
Confidence 3455565544333 3 6999999998887776654432 42 4777774
No 361
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=53.68 E-value=8.2 Score=37.21 Aligned_cols=33 Identities=33% Similarity=0.476 Sum_probs=26.2
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||.|+|||+.|.++|..+.. .|.- ..++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~~-----~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGSC-----SELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCC
Confidence 89999999999999976644 3542 379999985
No 362
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=53.57 E-value=6.2 Score=42.07 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.||+.+|-.+.+ .|. ++.++|+..
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQR-----RGA-------VVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 579999999999999987754 354 699999863
No 363
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=53.57 E-value=6.8 Score=39.32 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 579999999999999987754 353 68999984
No 364
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=53.49 E-value=6 Score=41.33 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 569999999999999987654 465 58899986
No 365
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=53.17 E-value=5.9 Score=40.01 Aligned_cols=35 Identities=20% Similarity=0.402 Sum_probs=26.9
Q ss_pred CCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 322 ~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
+++||+|+|.|-+|++.|+.+.+ .|. ++...|++-
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~ 38 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRM 38 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCC
Confidence 44899999999999999866543 454 577888854
No 366
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=53.11 E-value=25 Score=36.68 Aligned_cols=93 Identities=24% Similarity=0.168 Sum_probs=60.7
Q ss_pred hCCce-EEEEecCCCchHHHHHHHHhhcccccccCcc---hhHHHHHHHHHHHHHHh---------CC----C--ccCCC
Q 013638 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL----S--LTDFA 322 (439)
Q Consensus 262 ~~P~~-~IqfEDf~~~naf~iL~ryr~~~~~FNDDiQ---GTaaV~LAgll~A~r~~---------g~----~--l~dl~ 322 (439)
..|+. .|+.--.+..|- .+-.--+.-+.|.|---- .+|=-++|.+++..|-. |+ + -.+|.
T Consensus 63 ~~~~Lk~i~~~~~G~d~i-d~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~ 141 (529)
T 1ygy_A 63 AAPKLKIVARAGVGLDNV-DVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIF 141 (529)
T ss_dssp TCTTCCEEEESSSCCTTB-CHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCT
T ss_pred hCCCCcEEEECCcCcCcc-CHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccC
Confidence 46876 888877777763 122222334777775433 34555788888877631 10 0 12455
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~ 174 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF-----GA-------YVVAYDPY 174 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECTT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEECCC
Confidence 59999999999999999887653 43 68888874
No 367
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=52.90 E-value=16 Score=35.13 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=21.0
Q ss_pred HHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHH
Q 013638 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMA 342 (439)
Q Consensus 307 ll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li 342 (439)
.+.|++..+.+.. ++|+|+|||+.|...+.+.
T Consensus 165 a~~~l~~~~~~~g----~~VlV~GaG~vG~~a~qla 196 (348)
T 3two_A 165 TYSPLKFSKVTKG----TKVGVAGFGGLGSMAVKYA 196 (348)
T ss_dssp HHHHHHHTTCCTT----CEEEEESCSHHHHHHHHHH
T ss_pred HHHHHHhcCCCCC----CEEEEECCcHHHHHHHHHH
Confidence 3556665544333 6999999997776665544
No 368
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=52.75 E-value=16 Score=35.42 Aligned_cols=33 Identities=30% Similarity=0.426 Sum_probs=26.5
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||.|+|||+.|.++|..+... |.. ..++++|.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~~-----~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GFA-----REMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCC
Confidence 799999999999998887653 431 379999975
No 369
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=52.73 E-value=8.2 Score=39.03 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=25.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 61 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASS-----GQ-------RVLIVDRR 61 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECccHHHHHHHHHHHHC-----CC-------ceEEEecc
Confidence 6899999999999999877553 43 57788875
No 370
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=52.60 E-value=20 Score=34.79 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=21.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 699999999877776655433 243 35777764
No 371
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=52.50 E-value=21 Score=34.56 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=22.4
Q ss_pred HHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHH
Q 013638 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAV 343 (439)
Q Consensus 307 ll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~ 343 (439)
.+.+++..+.+... ++|+|.|||..|...+.+..
T Consensus 168 a~~~l~~~~~~~~g---~~VlV~GaG~vG~~a~qlak 201 (357)
T 2cf5_A 168 VYSPLSHFGLKQPG---LRGGILGLGGVGHMGVKIAK 201 (357)
T ss_dssp HHHHHHHTSTTSTT---CEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCC---CEEEEECCCHHHHHHHHHHH
Confidence 34556655544234 69999999987777765544
No 372
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=52.37 E-value=18 Score=34.67 Aligned_cols=20 Identities=15% Similarity=0.323 Sum_probs=15.1
Q ss_pred ceEEEeCchhHHHHHHHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAV 343 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~ 343 (439)
++|+|+|||..|...+.+..
T Consensus 172 ~~VlV~GaG~vG~~aiqlak 191 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILK 191 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH
Confidence 79999999877766655443
No 373
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=52.36 E-value=7.6 Score=36.80 Aligned_cols=22 Identities=18% Similarity=0.391 Sum_probs=19.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQA 345 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~ 345 (439)
.||.|+|||+-|..+|..|..+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~ 24 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS 24 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHC
Confidence 5899999999999999888764
No 374
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=52.18 E-value=27 Score=33.16 Aligned_cols=21 Identities=29% Similarity=0.408 Sum_probs=16.2
Q ss_pred ceEEEeCc-hhHHHHHHHHHHH
Q 013638 324 QKIVVVGA-GSAGLGVLKMAVQ 344 (439)
Q Consensus 324 ~riv~~GA-GsAgiGiA~li~~ 344 (439)
.+|+|.|| |..|...+.+...
T Consensus 152 ~~VlV~Ga~G~vG~~~~q~a~~ 173 (330)
T 1tt7_A 152 GSVLVTGATGGVGGIAVSMLNK 173 (330)
T ss_dssp CCEEEESTTSHHHHHHHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHH
Confidence 38999998 9888877665543
No 375
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=52.10 E-value=12 Score=36.49 Aligned_cols=96 Identities=11% Similarity=0.070 Sum_probs=52.6
Q ss_pred CCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCC
Q 013638 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (439)
Q Consensus 320 dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~s 399 (439)
++...||.|+|+|..|...++.+... ..|. +-+.++|++ .+.. +.+++.-.. ......+
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~---~~~~------~lvav~d~~------~~~~----~~~a~~~g~--~~~~~~~ 78 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANT---VSGV------EVVAVCDIV------AGRA----QAALDKYAI--EAKDYND 78 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT---CTTE------EEEEEECSS------TTHH----HHHHHHHTC--CCEEESS
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhh---CCCc------EEEEEEeCC------HHHH----HHHHHHhCC--CCeeeCC
Confidence 33448999999999887665554421 1121 123466652 1111 223322110 0012467
Q ss_pred HHHHhccCCCcEEEeccCCCCCCCHHHHHHHhcc-----CCCCC
Q 013638 400 LLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLCF-----IPCFI 438 (439)
Q Consensus 400 L~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~~-----~~~pi 438 (439)
+.|+++.-++|+++ +++ |..+..+++....+. |+||+
T Consensus 79 ~~~ll~~~~~D~V~-i~t-p~~~h~~~~~~al~aGk~Vl~EKPl 120 (357)
T 3ec7_A 79 YHDLINDKDVEVVI-ITA-SNEAHADVAVAALNANKYVFCEKPL 120 (357)
T ss_dssp HHHHHHCTTCCEEE-ECS-CGGGHHHHHHHHHHTTCEEEEESSS
T ss_pred HHHHhcCCCCCEEE-EcC-CcHHHHHHHHHHHHCCCCEEeecCc
Confidence 99999987899988 554 555666666655442 56665
No 376
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=51.98 E-value=14 Score=38.71 Aligned_cols=37 Identities=35% Similarity=0.475 Sum_probs=27.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHc--CCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMA--GNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~--Gls~eeA~~~i~lvDs~G 368 (439)
-.|||+|||.||+..|-.+.+... +. |+ ++.++++..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~-~~~~G~-------~V~vlEk~~ 74 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAA-QHEKDL-------RVCLVEKAA 74 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHH-HTTCCC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhccc-ccCCCC-------cEEEEeCCC
Confidence 469999999999999998877533 23 54 577777653
No 377
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=51.92 E-value=4.1 Score=41.65 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=26.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|||+|||.||+..|..+... .++.++|+.-
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-------------~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-------------LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-------------CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-------------CCEEEEeCCC
Confidence 5899999999999999876542 3799999864
No 378
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=51.63 E-value=8.7 Score=36.88 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=25.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|||+-|..+|..+..+ | .+++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCC
Confidence 5899999999999999888653 3 267777765
No 379
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=51.42 E-value=8.4 Score=40.07 Aligned_cols=31 Identities=39% Similarity=0.547 Sum_probs=25.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.+|+|+|||.||+..|..+.+. |. ++.++|+
T Consensus 108 ~dvvVIG~GpAGl~aA~~l~~~-----g~-------~v~liE~ 138 (598)
T 2x8g_A 108 YDLIVIGGGSGGLAAGKEAAKY-----GA-------KTAVLDY 138 (598)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred ccEEEECCCccHHHHHHHHHhC-----CC-------eEEEEec
Confidence 6899999999999999887653 43 6889985
No 380
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=51.42 E-value=9.2 Score=37.79 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=27.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..|.+ .|.+ .++.++++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCCC
Confidence 589999999999999988865 3532 2688888753
No 381
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=51.10 E-value=9.6 Score=43.47 Aligned_cols=41 Identities=24% Similarity=0.414 Sum_probs=32.0
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
+.||+++|||.-|.-+|+.|+.+++ ..| -..+|.++|.+=+
T Consensus 425 ~~~VlvVGaGGlGsevlk~La~~Gv-~~g-----~~G~i~lvD~D~V 465 (1015)
T 3cmm_A 425 NSKVFLVGSGAIGCEMLKNWALLGL-GSG-----SDGYIVVTDNDSI 465 (1015)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTT-TCS-----TTCEEEEECCCBC
T ss_pred cCeEEEEecCHHHHHHHHHHHHcCc-CcC-----CCCeEEEEeCCEe
Confidence 4899999999999999999988755 122 1268999998643
No 382
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=51.08 E-value=10 Score=34.70 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=25.3
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||.|+|+|..|..+|..+... |. .+++++|+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-----GG------YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----CS------CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-----CC------CeEEEECCC
Confidence 799999999999999887654 42 367888764
No 383
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=51.07 E-value=15 Score=35.02 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHH
Q 013638 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQ 344 (439)
Q Consensus 302 V~LAgll~A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~ 344 (439)
+.++..+.|+......-.. ++++|.|| |..|..++.++..
T Consensus 138 ~~~~ta~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~ 178 (345)
T 2j3h_A 138 MPGMTAYAGFYEVCSPKEG---ETVYVSAASGAVGQLVGQLAKM 178 (345)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhCCCCC---CEEEEECCCcHHHHHHHHHHHH
Confidence 3444455555322222233 79999997 8888877766543
No 384
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=51.04 E-value=7.4 Score=39.91 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.+||..+..+ |. +++++|+.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-----G~-------~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-----GI-------SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999887653 53 57888863
No 385
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=50.99 E-value=20 Score=34.83 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=20.1
Q ss_pred HHHHHHH--hCCCccCCCCceEEEeCchhHHHHHHHHH
Q 013638 307 LLGTVRA--QGLSLTDFADQKIVVVGAGSAGLGVLKMA 342 (439)
Q Consensus 307 ll~A~r~--~g~~l~dl~~~riv~~GAGsAgiGiA~li 342 (439)
.+.|++. .+.+. . ++|+|+|||..|...+.+.
T Consensus 173 a~~al~~~~~~~~~-g---~~VlV~GaG~vG~~avqla 206 (359)
T 1h2b_A 173 AYRAVKKAARTLYP-G---AYVAIVGVGGLGHIAVQLL 206 (359)
T ss_dssp HHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHhhccCCCC-C---CEEEEECCCHHHHHHHHHH
Confidence 4555655 44333 3 6999999987666655443
No 386
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=50.91 E-value=9.9 Score=38.96 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=27.4
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
|++++|||+|+|..|..-++++.++. .++.++|.
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~g------------a~V~vi~~ 43 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAG------------ARLTVNAL 43 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTT------------BEEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCc------------CEEEEEcC
Confidence 44599999999999999999988753 26777775
No 387
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=50.68 E-value=6.4 Score=34.85 Aligned_cols=88 Identities=11% Similarity=0.118 Sum_probs=51.0
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChh-----hhccccccCCcCCCCCC
Q 013638 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA-----AAPFAKDPGDFMGLREG 397 (439)
Q Consensus 324 ~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~-----k~~fA~~~~~~~~~~~~ 397 (439)
.+|+|.|| |-.|..+|+.+.+ +.|. ++++++++.- +.+... +..+..- + ..+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~----~~g~-------~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~--D---~~d~ 64 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLT----YTDM-------HITLYGRQLK-----TRIPPEIIDHERVTVIEG--S---FQNP 64 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHH----HCCC-------EEEEEESSHH-----HHSCHHHHTSTTEEEEEC--C---TTCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHh----cCCc-------eEEEEecCcc-----ccchhhccCCCceEEEEC--C---CCCH
Confidence 35999996 7888888888763 2453 6888877521 011111 0111110 0 0122
Q ss_pred CCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhccC
Q 013638 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLCFI 434 (439)
Q Consensus 398 ~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~~~ 434 (439)
.++.++++. +|++|=+.+..++-++.+++.|.+..
T Consensus 65 ~~~~~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~ 99 (221)
T 3r6d_A 65 GXLEQAVTN--AEVVFVGAMESGSDMASIVKALSRXN 99 (221)
T ss_dssp HHHHHHHTT--CSEEEESCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcC--CCEEEEcCCCCChhHHHHHHHHHhcC
Confidence 457888886 89999776533222778888887654
No 388
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=50.60 E-value=20 Score=34.74 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=22.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 192 ~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999999877777655443 243 36777764
No 389
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=50.59 E-value=20 Score=34.82 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=22.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 699999999888776655443 243 36777764
No 390
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=50.47 E-value=18 Score=35.84 Aligned_cols=32 Identities=28% Similarity=0.576 Sum_probs=21.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|||+.|...+.+.. ..|. ++++.+|+
T Consensus 215 ~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~ 246 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILK-----HAGA------SKVILSEP 246 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECC
Confidence 79999999877766554433 2454 37887774
No 391
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=50.33 E-value=14 Score=36.74 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=46.1
Q ss_pred hccccccc-C-cchhHHHHHHHHHHHHHHh---------C---C-------------CccCCCCceEEEeCchhHHHHHH
Q 013638 287 KRFCMFND-D-IQGTAGVALAGLLGTVRAQ---------G---L-------------SLTDFADQKIVVVGAGSAGLGVL 339 (439)
Q Consensus 287 ~~~~~FND-D-iQGTaaV~LAgll~A~r~~---------g---~-------------~l~dl~~~riv~~GAGsAgiGiA 339 (439)
..+++.|- + -..+|=-+++-+|+..|-. | . .-.+|.+.+|.|+|.|..|..+|
T Consensus 97 ~gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA 176 (352)
T 3gg9_A 97 KGVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVA 176 (352)
T ss_dssp HTCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHH
Confidence 34666662 2 2344555677788776631 1 0 12356669999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 340 KMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 340 ~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+.+... |+ +++.+|+.
T Consensus 177 ~~l~~~-----G~-------~V~~~d~~ 192 (352)
T 3gg9_A 177 GYGRAF-----GM-------NVLVWGRE 192 (352)
T ss_dssp HHHHHT-----TC-------EEEEECSH
T ss_pred HHHHhC-----CC-------EEEEECCC
Confidence 988654 43 68888875
No 392
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=50.30 E-value=10 Score=35.90 Aligned_cols=30 Identities=23% Similarity=0.391 Sum_probs=25.1
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
||.|+|+|..|..+|..+..+ | .+++++|+
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEc
Confidence 799999999999999888654 4 26888887
No 393
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=50.11 E-value=10 Score=37.60 Aligned_cols=36 Identities=22% Similarity=0.426 Sum_probs=27.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL 369 (439)
-+|+|+|+|.||+..|..+.... .|. ++.++|+...
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~---~g~-------~V~v~e~~~~ 101 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNR---PDL-------KVCIIESSVA 101 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC---TTS-------CEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhcC---CCC-------eEEEEecCcc
Confidence 58999999999999998876530 133 6888887543
No 394
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=49.99 E-value=7.5 Score=39.60 Aligned_cols=32 Identities=25% Similarity=0.611 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
..|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~-----~G~-------~V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKK-----HTD-------KVVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TCS-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 479999999999999877654 353 68999975
No 395
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=49.95 E-value=17 Score=35.18 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+..+ |.. .+++.+|++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~~-----~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CCC-----CEEEEEECC
Confidence 6999999999999999887653 542 378888874
No 396
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=49.88 E-value=12 Score=36.18 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=22.3
Q ss_pred ceEEEeCchhHHHHH-HHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGV-LKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGi-A~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|||+.|... +.+...+ .|. ++++.+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~----~Ga------~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD----KGY------ENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT----TCC------CEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHH----cCC------cEEEEEeC
Confidence 699999998877766 4443132 354 35888886
No 397
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=49.55 E-value=22 Score=33.73 Aligned_cols=49 Identities=18% Similarity=0.077 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhCCCccCCCCceEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 303 ALAGLLGTVRAQGLSLTDFADQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 303 ~LAgll~A~r~~g~~l~dl~~~riv~~G-AGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.++..+.|++....--.. ++++|.| +|..|..++.++... |. +++.+|+
T Consensus 124 ~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~~-----G~-------~V~~~~~ 173 (327)
T 1qor_A 124 KGLTVYYLLRKTYEIKPD---EQFLFHAAAGGVGLIACQWAKAL-----GA-------KLIGTVG 173 (327)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEESSTTBHHHHHHHHHHHHH-----TC-------EEEEEES
T ss_pred HHHHHHHHHHHhhCCCCC---CEEEEECCCCHHHHHHHHHHHHc-----CC-------EEEEEeC
Confidence 444455556522222233 7999999 588888777766543 42 5777765
No 398
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=49.50 E-value=9.5 Score=36.95 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=25.0
Q ss_pred ceEEEeCchhHHH-HHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGL-GVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgi-GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+||.|+|.|-+|+ ++|+++.+. |. ++...|.+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~-----G~-------~V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA-----GF-------EVSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT-----TC-------EEEEEESS
T ss_pred cEEEEEEECHHHHHHHHHHHHhC-----CC-------EEEEEcCC
Confidence 6899999999999 488877653 43 67777764
No 399
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=49.43 E-value=9.7 Score=37.02 Aligned_cols=21 Identities=33% Similarity=0.559 Sum_probs=19.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQA 345 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~ 345 (439)
.+|.|+|+|..|-+||..+. +
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a 33 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S 33 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T
T ss_pred CeEEEEeeCHHHHHHHHHHH-c
Confidence 68999999999999999988 6
No 400
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=49.38 E-value=9.5 Score=36.79 Aligned_cols=33 Identities=30% Similarity=0.362 Sum_probs=26.0
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||.|+|||+.|.++|..+... ++ -.+++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC
Confidence 799999999999999876542 21 1479999985
No 401
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=49.33 E-value=10 Score=34.71 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=25.7
Q ss_pred CCCCceEEEeCc-hh-HHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 320 DFADQKIVVVGA-GS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 320 dl~~~riv~~GA-Gs-AgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+|++++++|.|| |+ .|..+|+.+++ +|. +++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCC
Confidence 355599999999 64 77777776654 353 68888874
No 402
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=49.19 E-value=7.6 Score=38.05 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=24.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-+|+|+|||.||+..|..+.+. |. ++.++++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~-----g~-------~v~v~E~~ 33 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL-----NK-------KVLVIEKR 33 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG-----TC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEecC
Confidence 4799999999999999887653 42 56677764
No 403
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=49.16 E-value=22 Score=33.56 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHH
Q 013638 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQ 344 (439)
Q Consensus 302 V~LAgll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~ 344 (439)
..++..+.|++..+.+ .. ++|+|+|||+.|...+.+...
T Consensus 126 ~~~~ta~~al~~~~~~-~g---~~VlV~GaG~vG~~a~qlak~ 164 (315)
T 3goh_A 126 CPLLTAWQAFEKIPLT-KQ---REVLIVGFGAVNNLLTQMLNN 164 (315)
T ss_dssp HHHHHHHHHHTTSCCC-SC---CEEEEECCSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhcCCC-CC---CEEEEECCCHHHHHHHHHHHH
Confidence 4455556666433333 23 699999999888877665543
No 404
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=49.14 E-value=21 Score=34.88 Aligned_cols=34 Identities=26% Similarity=0.279 Sum_probs=21.3
Q ss_pred HHHHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHH
Q 013638 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMA 342 (439)
Q Consensus 305 Agll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li 342 (439)
+..+.|++..+.+. . ++|+|+|||+.|...+.+.
T Consensus 181 ~tA~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqla 214 (369)
T 1uuf_A 181 ITTYSPLRHWQAGP-G---KKVGVVGIGGLGHMGIKLA 214 (369)
T ss_dssp HHHHHHHHHTTCCT-T---CEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHH
Confidence 33455666554433 3 6999999987666665443
No 405
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=48.93 E-value=16 Score=34.92 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=27.4
Q ss_pred HHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 307 ll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.+.+++..+.+.. ++|+|.|||..|...+.+... .|. +++.+|+
T Consensus 155 a~~~l~~~~~~~g----~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 198 (340)
T 3s2e_A 155 VYKGLKVTDTRPG----QWVVISGIGGLGHVAVQYARA-----MGL-------RVAAVDI 198 (340)
T ss_dssp HHHHHHTTTCCTT----SEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHcCCCCC----CEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeC
Confidence 4556655544433 599999998777666544432 353 5777765
No 406
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=48.91 E-value=11 Score=38.95 Aligned_cols=35 Identities=40% Similarity=0.595 Sum_probs=28.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
-.|||+|||.||+..|-.+.+. |+ ++.++++...+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~-----G~-------~V~vlEk~~~~ 156 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKA-----GA-------NVILVDKAPFS 156 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCCCC
Confidence 6899999999999998776553 53 68899987654
No 407
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=48.87 E-value=25 Score=33.35 Aligned_cols=20 Identities=30% Similarity=0.469 Sum_probs=15.2
Q ss_pred ceEEEeCc-hhHHHHHHHHHH
Q 013638 324 QKIVVVGA-GSAGLGVLKMAV 343 (439)
Q Consensus 324 ~riv~~GA-GsAgiGiA~li~ 343 (439)
.+|+|.|| |..|...+.+..
T Consensus 151 ~~VlV~Ga~G~vG~~~~q~a~ 171 (328)
T 1xa0_A 151 GPVLVTGATGGVGSLAVSMLA 171 (328)
T ss_dssp CCEEESSTTSHHHHHHHHHHH
T ss_pred ceEEEecCCCHHHHHHHHHHH
Confidence 38999998 888877765543
No 408
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=48.77 E-value=19 Score=34.27 Aligned_cols=43 Identities=19% Similarity=0.054 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHH
Q 013638 299 TAGVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQ 344 (439)
Q Consensus 299 TaaV~LAgll~A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~ 344 (439)
+-...++..+.|+......-.. ++++|.|| |..|..++.++..
T Consensus 125 ~l~~~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~ 168 (333)
T 1v3u_A 125 TIGMPGLTAYFGLLEVCGVKGG---ETVLVSAAAGAVGSVVGQIAKL 168 (333)
T ss_dssp TTSHHHHHHHHHHHTTSCCCSS---CEEEEESTTBHHHHHHHHHHHH
T ss_pred HhCChHHHHHHHHHHhhCCCCC---CEEEEecCCCcHHHHHHHHHHH
Confidence 3334445555565332222234 79999998 8888777766544
No 409
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=48.77 E-value=9.5 Score=38.33 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=28.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
.+|+|+|||-+|+..|-.|..+ | .++.++|++.-+
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~-----G-------~~V~vlE~~~~~ 46 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVD-----G-------KKVLHIDKQDHY 46 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCCCC
Confidence 6899999999999999887653 5 368899987544
No 410
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=48.72 E-value=20 Score=34.76 Aligned_cols=95 Identities=15% Similarity=0.178 Sum_probs=53.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCC-CCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r-~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||.|+|||..|.++|..+.. .|+- ..++++|.+--..+.. .++.+. .++... ++. -..+..+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~-----~~~~-----~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~--~~~---i~~~~~~ 70 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMN-----QGIA-----DEIVLIDANESKAIGDAMDFNHG-KVFAPK--PVD---IWHGDYD 70 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTCC-----SEEEEECSSHHHHHHHHHHHHHH-TTSSSS--CCE---EEECCGG
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCcchHHHHHhhHHHH-hhhcCC--CeE---EEcCcHH
Confidence 589999999999999876643 2442 4799999852111110 012111 111110 000 0113456
Q ss_pred HhccCCCcEEEeccCCC---C-----------CCCHHHHHHHhccCCC
Q 013638 403 VVRKVKPHVLLGLSGVG---G-----------VFNEEVKTYFLCFIPC 436 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~---G-----------~FteevV~~Ma~~~~~ 436 (439)
++++ +|++|=+.+.+ | .+.+++++.|.++++.
T Consensus 71 al~~--aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~ 116 (316)
T 1ldn_A 71 DCRD--ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQ 116 (316)
T ss_dssp GTTT--CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCC
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCC
Confidence 7877 89988554433 2 2346677888887764
No 411
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=48.72 E-value=19 Score=33.38 Aligned_cols=70 Identities=20% Similarity=0.292 Sum_probs=41.1
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.+|+|.|| |-.|..+++.|++. |. +++.+++. .+...+. ...+..- + .. ..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g~-------~V~~~~r~----~~~~~~~--~~~~~~~--D---l~-~~~~~~ 58 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND-----GN-------TPIILTRS----IGNKAIN--DYEYRVS--D---YT-LEDLIN 58 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----TC-------EEEEEESC----CC-------CCEEEEC--C---CC-HHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----CC-------EEEEEeCC----CCcccCC--ceEEEEc--c---cc-HHHHHH
Confidence 58999996 88888888777653 42 68888886 1111122 1111111 0 01 234777
Q ss_pred HhccCCCcEEEeccCCC
Q 013638 403 VVRKVKPHVLLGLSGVG 419 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~ 419 (439)
++++ +|++|=+.+..
T Consensus 59 ~~~~--~d~Vih~a~~~ 73 (311)
T 3m2p_A 59 QLND--VDAVVHLAATR 73 (311)
T ss_dssp HTTT--CSEEEECCCCC
T ss_pred hhcC--CCEEEEccccC
Confidence 8874 99999777643
No 412
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=48.40 E-value=12 Score=36.96 Aligned_cols=96 Identities=18% Similarity=0.248 Sum_probs=52.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC-CCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~-r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||.|+|||..|.++|..+.. .|+. .+.++|.+-=..++ ..+|.+.. +|....... ....+. +
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~-----~~~~------~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v---~~t~d~-~ 71 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGL-----KELG------DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKF---TGANDY-A 71 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCE---EEESSG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEE---EEeCCH-H
Confidence 799999999999999887765 3552 59999974311110 01222211 111111010 011334 7
Q ss_pred HhccCCCcEEEeccCC---CCC-----C------CHHHHHHHhccCCCC
Q 013638 403 VVRKVKPHVLLGLSGV---GGV-----F------NEEVKTYFLCFIPCF 437 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~---~G~-----F------teevV~~Ma~~~~~p 437 (439)
++++ +|++|=+.+. +|- | -+++++.|.++++.-
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a 118 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEA 118 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCe
Confidence 8888 8988744443 342 1 256667777777653
No 413
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=48.22 E-value=24 Score=34.31 Aligned_cols=89 Identities=18% Similarity=0.118 Sum_probs=50.1
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
..||.|+|+|..|...+..+.. ..+. +=+.++|++ +.+..+++... .....++.|
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~-----------~~~~~~a~~~g----~~~~~~~~~ 59 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASA----ADNL------EVHGVFDIL-----------AEKREAAAQKG----LKIYESYEA 59 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT----STTE------EEEEEECSS-----------HHHHHHHHTTT----CCBCSCHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHh----CCCc------EEEEEEcCC-----------HHHHHHHHhcC----CceeCCHHH
Confidence 3799999999888766554322 1121 122355552 12222332211 123568999
Q ss_pred HhccCCCcEEEeccCCCCCCCHHHHHHHhc-----cCCCCC
Q 013638 403 VVRKVKPHVLLGLSGVGGVFNEEVKTYFLC-----FIPCFI 438 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~G~FteevV~~Ma~-----~~~~pi 438 (439)
+++.-++|+++ +++ |...-.++++...+ .|+||+
T Consensus 60 ll~~~~~D~V~-i~t-p~~~h~~~~~~al~aGkhVl~EKP~ 98 (359)
T 3e18_A 60 VLADEKVDAVL-IAT-PNDSHKELAISALEAGKHVVCEKPV 98 (359)
T ss_dssp HHHCTTCCEEE-ECS-CGGGHHHHHHHHHHTTCEEEEESSC
T ss_pred HhcCCCCCEEE-EcC-CcHHHHHHHHHHHHCCCCEEeeCCC
Confidence 99977789988 555 55555566555443 256665
No 414
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=48.18 E-value=22 Score=33.80 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=43.4
Q ss_pred CCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCCh-hhhccccccCCcCCCC-CC
Q 013638 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLR-EG 397 (439)
Q Consensus 321 l~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~-~k~~fA~~~~~~~~~~-~~ 397 (439)
+...+|+|.|| |-.|..+++.|++. .| -+++.+|+.. .....+.. ....+..- + .. +.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~---~~~~~~~~~~~v~~~~~--D---l~~d~ 82 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT---DRLGDLVKHERMHFFEG--D---ITINK 82 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC---TTTGGGGGSTTEEEEEC--C---TTTCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh---hhhhhhccCCCeEEEeC--c---cCCCH
Confidence 34489999996 88888888877653 23 3788888742 00011110 11112111 0 01 22
Q ss_pred CCHHHHhccCCCcEEEeccCC
Q 013638 398 ASLLEVVRKVKPHVLLGLSGV 418 (439)
Q Consensus 398 ~sL~eaV~~vkPtvLIG~S~~ 418 (439)
.++.+++++ +|++|=+.+.
T Consensus 83 ~~~~~~~~~--~d~Vih~A~~ 101 (372)
T 3slg_A 83 EWVEYHVKK--CDVILPLVAI 101 (372)
T ss_dssp HHHHHHHHH--CSEEEECBCC
T ss_pred HHHHHHhcc--CCEEEEcCcc
Confidence 357788886 9999976653
No 415
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=48.18 E-value=13 Score=33.25 Aligned_cols=37 Identities=22% Similarity=0.330 Sum_probs=25.4
Q ss_pred cCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 319 TDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 319 ~dl~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|++.+|+|.|| |-.|..+++.+++ .|. ++++++++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~R~ 54 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KGH-------EPVAMVRN 54 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4455599999998 8888888877765 342 68888774
No 416
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=48.17 E-value=13 Score=40.93 Aligned_cols=35 Identities=29% Similarity=0.522 Sum_probs=27.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
.+|+|+|||.||+..|..+... |. ++.++++..-+
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~~~ 371 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNF-----GI-------KVTVLEAKDRI 371 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecccce
Confidence 6899999999999999887664 43 68888875443
No 417
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=48.15 E-value=7.8 Score=37.05 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=24.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|||+-|..+|..+..+ | .+++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcC
Confidence 5899999999999999887653 4 257777764
No 418
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=47.81 E-value=11 Score=35.17 Aligned_cols=22 Identities=32% Similarity=0.225 Sum_probs=19.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQA 345 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~ 345 (439)
.||.|+|+|+.|..+|..|.++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~ 30 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALR 30 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC
Confidence 4899999999999999988765
No 419
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=47.69 E-value=14 Score=35.54 Aligned_cols=48 Identities=19% Similarity=0.313 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 304 LAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 304 LAgll~A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++..+.|+.....--.. ++|+|.|| |..|..++.+... .|. +++.+|+
T Consensus 144 ~~ta~~~l~~~~~~~~g---~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 192 (342)
T 4eye_A 144 YHTMYFAYARRGQLRAG---ETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVN 192 (342)
T ss_dssp HHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 34444555322322234 69999998 8888877665543 343 5777776
No 420
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=47.65 E-value=6.9 Score=41.29 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|-.+.. .|+ ++.++|+.
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~-----~G~-------kV~VlEr~ 139 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQ-----MGF-------NPIIVERG 139 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHH-----TTC-------CCEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEEcc
Confidence 689999999999999987765 454 57888876
No 421
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=47.57 E-value=20 Score=34.45 Aligned_cols=44 Identities=16% Similarity=0.254 Sum_probs=27.7
Q ss_pred HHHHHHHhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 307 ll~A~r~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.+.|++..+.+. . ++|+|.|||..|..++.+... .|. +++.+|+
T Consensus 153 a~~~l~~~~~~~-g---~~VlV~GaG~vG~~~~~~a~~-----~Ga-------~Vi~~~~ 196 (339)
T 1rjw_A 153 TYKALKVTGAKP-G---EWVAIYGIGGLGHVAVQYAKA-----MGL-------NVVAVDI 196 (339)
T ss_dssp HHHHHHHHTCCT-T---CEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred HHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 355565554433 3 699999998877766655432 342 5777774
No 422
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=47.45 E-value=14 Score=33.89 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+... |. +.++++|++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCC
Confidence 7999999999999999887653 43 237777764
No 423
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=47.45 E-value=9.7 Score=39.52 Aligned_cols=32 Identities=31% Similarity=0.674 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 37 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-----GH-------QVLLYDIS 37 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988764 54 58888864
No 424
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=47.37 E-value=27 Score=32.93 Aligned_cols=31 Identities=26% Similarity=0.481 Sum_probs=19.8
Q ss_pred HHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHH
Q 013638 310 TVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAV 343 (439)
Q Consensus 310 A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~ 343 (439)
+++..+.+..+ .+|+|.|| |+.|...+.+..
T Consensus 137 ~~~~~~~~~~~---g~VlV~Ga~G~vG~~aiqla~ 168 (324)
T 3nx4_A 137 ALEDAGIRPQD---GEVVVTGASGGVGSTAVALLH 168 (324)
T ss_dssp HHHHTTCCGGG---CCEEESSTTSHHHHHHHHHHH
T ss_pred HhhhcccCCCC---CeEEEECCCcHHHHHHHHHHH
Confidence 33444444443 46999998 888887765544
No 425
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=47.36 E-value=9.1 Score=38.30 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=24.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.+|+..|..+.+. |. ++.++++.
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~ 45 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKIH-----GL-------NVTVFEAE 45 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----SC-------EEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEEeC
Confidence 6899999999999999887653 43 56666665
No 426
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=47.29 E-value=15 Score=38.00 Aligned_cols=35 Identities=37% Similarity=0.652 Sum_probs=28.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
..|||+|||.||+..|-.+.+ .|. ++.++++...+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 689999999999999877654 354 68899987654
No 427
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=47.03 E-value=13 Score=36.14 Aligned_cols=95 Identities=20% Similarity=0.300 Sum_probs=52.8
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC-CCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~-r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
||.|+|||+.|.++|-.++.. |+ ..++|+|.+-=-.++ -.+|.+...++..+. .. ....+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~-~i---~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIARTPGKPQGEALDLAHAAAELGVDI-RI---SGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSSTTHHHHHHHHHHHHHHHHTCCC-CE---EEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCChhhHHHHHHHHHHhhhhcCCCe-EE---EECCCH-HH
Confidence 689999999999999766542 55 279999985100000 001211111111110 00 011344 67
Q ss_pred hccCCCcEEEeccCCCC---C-----------CCHHHHHHHhccCCCC
Q 013638 404 VRKVKPHVLLGLSGVGG---V-----------FNEEVKTYFLCFIPCF 437 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~G---~-----------FteevV~~Ma~~~~~p 437 (439)
+++ +|++|=+.+.|. - +-+++++.|.++++.-
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a 110 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDA 110 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 888 999986554443 1 2457778888877654
No 428
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=47.02 E-value=10 Score=40.60 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=27.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.||+..|-.|.....+..|+ ++.++|++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-------~v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDL-------KVRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTC-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCC-------CEEEEeCCC
Confidence 57999999999999998876621111465 588898764
No 429
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=46.90 E-value=13 Score=36.43 Aligned_cols=34 Identities=29% Similarity=0.410 Sum_probs=27.1
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
..||.|+|||..|.++|..+.. .|+. .+.++|.+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~-----~~~~------~v~l~Di~ 38 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI-----KQLG------DVVLFDIA 38 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCc------eEEEEeCC
Confidence 3799999999999999877655 3542 69999985
No 430
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=46.83 E-value=29 Score=32.53 Aligned_cols=48 Identities=15% Similarity=0.243 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 303 ~LAgll~A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.++..+.|++..+ --.. ++++|.|| |..|..++.+... .|. +++.+|+
T Consensus 110 ~~~ta~~~l~~~~-~~~g---~~vlV~Ga~G~vG~~~~~~a~~-----~Ga-------~Vi~~~~ 158 (302)
T 1iz0_A 110 SFLTAYLALKRAQ-ARPG---EKVLVQAAAGALGTAAVQVARA-----MGL-------RVLAAAS 158 (302)
T ss_dssp HHHHHHHHHHHTT-CCTT---CEEEESSTTBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHHhc-CCCC---CEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3444455665444 2233 79999998 8888877665443 342 5777776
No 431
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=46.81 E-value=21 Score=34.73 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=21.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999999777766554432 353 36777764
No 432
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=46.71 E-value=11 Score=33.20 Aligned_cols=71 Identities=21% Similarity=0.247 Sum_probs=41.0
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||+|.|| |-.|-.+++.+.+ .| .+++.++++.- ....+.. ...+..- +. .+..++.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~-~~~~~~~--Dl---~d~~~~~~ 63 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE---KIKIENE-HLKVKKA--DV---SSLDEVCE 63 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG---GCCCCCT-TEEEECC--CT---TCHHHHHH
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc---cchhccC-ceEEEEe--cC---CCHHHHHH
Confidence 58999996 7777777766654 34 37888888521 1112211 1111111 00 12245788
Q ss_pred HhccCCCcEEEeccC
Q 013638 403 VVRKVKPHVLLGLSG 417 (439)
Q Consensus 403 aV~~vkPtvLIG~S~ 417 (439)
++++ +|++|=+.+
T Consensus 64 ~~~~--~d~vi~~a~ 76 (227)
T 3dhn_A 64 VCKG--ADAVISAFN 76 (227)
T ss_dssp HHTT--CSEEEECCC
T ss_pred HhcC--CCEEEEeCc
Confidence 8886 899997664
No 433
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=46.69 E-value=11 Score=33.31 Aligned_cols=31 Identities=16% Similarity=0.420 Sum_probs=24.5
Q ss_pred eEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~G-AGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||+|+| +|..|..+|..+.+ .|. +++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g~-------~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LGH-------EIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TTC-------EEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 799999 99999999888754 342 68888864
No 434
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=46.52 E-value=10 Score=39.79 Aligned_cols=33 Identities=30% Similarity=0.376 Sum_probs=26.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.+|+..|-.|.. .|+ ++.++|+.-
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~-----~G~-------~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRA-----GGV-------GALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEcCCC
Confidence 579999999999999988765 365 588888753
No 435
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=46.47 E-value=10 Score=38.88 Aligned_cols=32 Identities=38% Similarity=0.606 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.|+|+|||.||+..|..+.+ .|+ ++.++|++
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~-----~G~-------~V~liEk~ 64 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQ-----YGK-------KVMVLDFV 64 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecc
Confidence 689999999999999987755 353 68999973
No 436
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=46.34 E-value=16 Score=35.81 Aligned_cols=49 Identities=18% Similarity=0.201 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhC-CCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 303 ALAGLLGTVRAQG-LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 303 ~LAgll~A~r~~g-~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.++..+.|++..+ .+ .. ++|+|.|+|..|...+.+... .|. .+++.+|+
T Consensus 179 ~~~ta~~al~~~~~~~-~g---~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (380)
T 1vj0_A 179 SGATAYHAFDEYPESF-AG---KTVVIQGAGPLGLFGVVIARS-----LGA------ENVIVIAG 228 (380)
T ss_dssp HHHHHHHHHHTCSSCC-BT---CEEEEECCSHHHHHHHHHHHH-----TTB------SEEEEEES
T ss_pred HHHHHHHHHHhcCCCC-CC---CEEEEECcCHHHHHHHHHHHH-----cCC------ceEEEEcC
Confidence 4445556665443 22 23 699999999887776655433 342 36777774
No 437
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=46.21 E-value=12 Score=34.57 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=24.9
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999887653 43 68888864
No 438
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=46.20 E-value=8 Score=40.97 Aligned_cols=34 Identities=18% Similarity=0.372 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
..|+|+|||.||+..|-.+... .|+ ++.++|+..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~----~G~-------~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAF----PDI-------RTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC----TTS-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHh----CCC-------CEEEEeCCC
Confidence 5799999999999998877540 354 578888753
No 439
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=46.11 E-value=27 Score=33.54 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=21.0
Q ss_pred HHHHHHHHhCCCccCCCCceEEEeCch-hHHHHHHHHHH
Q 013638 306 GLLGTVRAQGLSLTDFADQKIVVVGAG-SAGLGVLKMAV 343 (439)
Q Consensus 306 gll~A~r~~g~~l~dl~~~riv~~GAG-sAgiGiA~li~ 343 (439)
..+.|++..+.+ .. ++++|.||| ..|..++.++.
T Consensus 158 ta~~~l~~~~~~-~g---~~vlV~Gagg~iG~~~~~~a~ 192 (347)
T 1jvb_A 158 TTYRAVRKASLD-PT---KTLLVVGAGGGLGTMAVQIAK 192 (347)
T ss_dssp HHHHHHHHTTCC-TT---CEEEEETTTSHHHHHHHHHHH
T ss_pred HHHHHHHhcCCC-CC---CEEEEECCCccHHHHHHHHHH
Confidence 345566554433 33 699999998 66666655543
No 440
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=46.10 E-value=11 Score=41.11 Aligned_cols=36 Identities=33% Similarity=0.506 Sum_probs=28.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
.+|+|+|||.+|+.+|-.|.+ .|. .++.++|+..+.
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~-----~G~------~~V~vlE~~~~~ 40 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVT-----RGW------NNITVLDQGPLN 40 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSCTT
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC------CcEEEEeCCCCC
Confidence 689999999999999988765 353 269999987653
No 441
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=46.06 E-value=17 Score=37.67 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=43.4
Q ss_pred CceEEEeCchhH--HHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc-ccccCCCCCChhhhccccccCCcCCCCCCCC
Q 013638 323 DQKIVVVGAGSA--GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG-LITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (439)
Q Consensus 323 ~~riv~~GAGsA--giGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G-Ll~~~r~~L~~~k~~fA~~~~~~~~~~~~~s 399 (439)
+.||.|+||||. |.|++..|+.. ..+ + ..|+|+|.+- -+.. +......+.+ .++. .....+
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~e~le~----~~~~~~~l~~--~~~~-I~~TtD 68 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDFEAAQK----NEVIGNHSGN--GRWR-YEAVST 68 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSHHHHHH----HHHHHTTSTT--SCEE-EEEESS
T ss_pred CCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCHHHHHH----HHHHHHHHhc--cCCe-EEEECC
Confidence 379999999995 68898887752 222 1 3899999752 1100 0000000111 1110 012357
Q ss_pred HHHHhccCCCcEEEecc
Q 013638 400 LLEVVRKVKPHVLLGLS 416 (439)
Q Consensus 400 L~eaV~~vkPtvLIG~S 416 (439)
+.||+++ +|.+|=.-
T Consensus 69 ~~eAl~d--ADfVI~ai 83 (450)
T 3fef_A 69 LKKALSA--ADIVIISI 83 (450)
T ss_dssp HHHHHTT--CSEEEECC
T ss_pred HHHHhcC--CCEEEecc
Confidence 9999999 99888433
No 442
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=46.02 E-value=26 Score=33.49 Aligned_cols=90 Identities=11% Similarity=0.040 Sum_probs=49.7
Q ss_pred CceEEEeCchhHHH-HHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHH
Q 013638 323 DQKIVVVGAGSAGL-GVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (439)
Q Consensus 323 ~~riv~~GAGsAgi-GiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ 401 (439)
..||.|+|+|..|. ..+.. +. ..|. +=+.++|++ .+......+.|-. . ....++.
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~----l~-~~~~------~lvav~d~~------~~~~~~~a~~~~~--~-----~~~~~~~ 59 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQ----LI-DAGA------ELAGVFESD------SDNRAKFTSLFPS--V-----PFAASAE 59 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHH----HH-HTTC------EEEEEECSC------TTSCHHHHHHSTT--C-----CBCSCHH
T ss_pred ccEEEEECCChHHHHHhhhh----hc-CCCc------EEEEEeCCC------HHHHHHHHHhcCC--C-----cccCCHH
Confidence 37999999997764 33332 32 2333 123567753 1222223333311 0 1256899
Q ss_pred HHhccCCCcEEEeccCCCCCCCHHHHHH-Hhc----cCCCCC
Q 013638 402 EVVRKVKPHVLLGLSGVGGVFNEEVKTY-FLC----FIPCFI 438 (439)
Q Consensus 402 eaV~~vkPtvLIG~S~~~G~FteevV~~-Ma~----~~~~pi 438 (439)
|+++.-++|+++ +++ |.....+++.. +.+ .|+||+
T Consensus 60 ~ll~~~~~D~V~-i~t-p~~~h~~~~~~al~aGkhVl~EKP~ 99 (336)
T 2p2s_A 60 QLITDASIDLIA-CAV-IPCDRAELALRTLDAGKDFFTAKPP 99 (336)
T ss_dssp HHHTCTTCCEEE-ECS-CGGGHHHHHHHHHHTTCEEEECSSC
T ss_pred HHhhCCCCCEEE-EeC-ChhhHHHHHHHHHHCCCcEEEeCCC
Confidence 999877789888 444 44555555554 433 367775
No 443
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=45.92 E-value=22 Score=34.51 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=21.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|||..|..++.+... .|. ++++.+|+
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 224 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKA-----AGA------ARIIGVDI 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 699999998777766555433 343 36777764
No 444
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=45.75 E-value=13 Score=35.77 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=26.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+..+ |... ..+++++|+.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-----G~~~---~~~V~v~~r~ 58 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-----GVLA---AHKIMASSPD 58 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-----TSSC---GGGEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CCCC---cceEEEECCC
Confidence 6899999999999999887653 4210 1357888764
No 445
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=45.74 E-value=13 Score=35.27 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=26.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988764 43 57788864
No 446
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=45.60 E-value=8.4 Score=41.75 Aligned_cols=32 Identities=28% Similarity=0.437 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.|+|+|||.||+..|-.+.. .|+ ++.++++.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr-----~G~-------kVlLIEk~ 59 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAAR-----MGA-------KTAMFVLN 59 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEec
Confidence 579999999999999877654 354 68888875
No 447
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=45.57 E-value=6.6 Score=36.11 Aligned_cols=35 Identities=17% Similarity=0.389 Sum_probs=22.9
Q ss_pred CCceEEEeCch---hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 322 ADQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 322 ~~~riv~~GAG---sAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
++.++||.||+ -.|..+|+.+.+ +|. +++++|++.
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~-------~V~~~~r~~ 45 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHR-----EGA-------ELAFTYQND 45 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESST
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----CCC-------EEEEEcCcH
Confidence 34899999984 455555555543 453 688888753
No 448
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=45.53 E-value=15 Score=30.26 Aligned_cols=22 Identities=45% Similarity=0.714 Sum_probs=18.2
Q ss_pred CceEEEeCchhHHHHHHHHHHH
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQ 344 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~ 344 (439)
..+++|+|||..|..+++.+..
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~ 25 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQ 25 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh
Confidence 3799999999999888877643
No 449
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=45.41 E-value=14 Score=35.38 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=28.8
Q ss_pred CCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc-----cCCCCC
Q 013638 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC-----FIPCFI 438 (439)
Q Consensus 397 ~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~-----~~~~pi 438 (439)
..++.|.++.-++|+++ +++ |..+-.+++.+-.+ .|+||+
T Consensus 83 y~d~~ell~~~~iDaV~-Iat-P~~~H~~~a~~al~aGkhVl~EKPl 127 (393)
T 4fb5_A 83 TADWRALIADPEVDVVS-VTT-PNQFHAEMAIAALEAGKHVWCEKPM 127 (393)
T ss_dssp ESCHHHHHHCTTCCEEE-ECS-CGGGHHHHHHHHHHTTCEEEECSCS
T ss_pred cCCHHHHhcCCCCcEEE-ECC-ChHHHHHHHHHHHhcCCeEEEccCC
Confidence 46899999988889887 555 66666676666554 368886
No 450
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=45.41 E-value=11 Score=38.24 Aligned_cols=31 Identities=39% Similarity=0.561 Sum_probs=25.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
-.|+|+|||.||+..|..+.+ .|+ ++.++|+
T Consensus 7 ~DvvVIG~G~aGl~aA~~la~-----~G~-------~V~liEk 37 (488)
T 3dgz_A 7 FDLLVIGGGSGGLACAKEAAQ-----LGK-------KVAVADY 37 (488)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEEe
Confidence 579999999999999987754 353 6899996
No 451
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=45.35 E-value=12 Score=35.82 Aligned_cols=20 Identities=35% Similarity=0.418 Sum_probs=18.3
Q ss_pred ceEEEeCchhHHHHHHHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAV 343 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~ 343 (439)
.||.|+|||+-|..+|..|.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~ 22 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS 22 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHh
Confidence 58999999999999998886
No 452
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=45.34 E-value=13 Score=37.89 Aligned_cols=33 Identities=33% Similarity=0.623 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+.+. |. .++.++|+.
T Consensus 10 ~~v~iiG~G~~Gl~~A~~l~~~-----g~------~~v~v~E~~ 42 (484)
T 4dsg_A 10 PKIVIIGAGPTGLGAAVRLTEL-----GY------KNWHLYECN 42 (484)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CSEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHHc-----CC------CCEEEEeCC
Confidence 6899999999999999887653 41 357778776
No 453
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=45.24 E-value=35 Score=33.97 Aligned_cols=131 Identities=12% Similarity=0.030 Sum_probs=76.5
Q ss_pred HhCCceEEEEecCCCchHHHHHHHHhhcccccc--cC-cchhHHHHHHHHHHHHHHhC------CCccCCCCceEEEeCc
Q 013638 261 ARWPKAIVQFEDFQMKWAFETLERYRKRFCMFN--DD-IQGTAGVALAGLLGTVRAQG------LSLTDFADQKIVVVGA 331 (439)
Q Consensus 261 ~~~P~~~IqfEDf~~~naf~iL~ryr~~~~~FN--DD-iQGTaaV~LAgll~A~r~~g------~~l~dl~~~riv~~GA 331 (439)
.+|.+ +|-+--++ +.+.+.+.+|- .+||.| || .|=| =+||=++.-.+..| ++++. .||.++|-
T Consensus 98 s~~~D-~iviR~~~-~~~~~~lA~~~-~vPVINag~~~~HPt--QaLaDl~Ti~e~~g~~~~~~~~l~g---l~va~vGD 169 (328)
T 3grf_A 98 SRMVD-ICTARLAT-KEMMREMAQHA-SVPCINALDDFGHPL--QMVCDFMTIKEKFTAAGEFSNGFKG---IKFAYCGD 169 (328)
T ss_dssp TTTCS-EEEEECSS-HHHHHHHHHHC-SSCEEESSCSSCCHH--HHHHHHHHHHHHHHHTTCCTTTGGG---CCEEEESC
T ss_pred HhhCC-EEEEecCC-hhHHHHHHHhC-CCCEEeCCCCCCCcH--HHHHHHHHHHHHhCCccccccccCC---cEEEEeCC
Confidence 44544 33344443 34455566653 588888 44 2333 34555555555555 25666 99999999
Q ss_pred hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccc--cC-CcCCCCCCCCHHHHhccCC
Q 013638 332 GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD--PG-DFMGLREGASLLEVVRKVK 408 (439)
Q Consensus 332 GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~--~~-~~~~~~~~~sL~eaV~~vk 408 (439)
+. + .+|+-++.++. +-|+ +|.++-.+|+..+-.+++.+.-+.++.. .. .. ....++.|||++
T Consensus 170 ~~-~-~va~Sl~~~~~-~~G~-------~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v---~~~~d~~eav~~-- 234 (328)
T 3grf_A 170 SM-N-NVTYDLMRGCA-LLGM-------ECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSI---KIFHDCKKGCEG-- 234 (328)
T ss_dssp CS-S-HHHHHHHHHHH-HHTC-------EEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEE---EEESSHHHHHTT--
T ss_pred CC-c-chHHHHHHHHH-HcCC-------EEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeE---EEEcCHHHHhcC--
Confidence 85 3 58888888877 5676 6899988888532111121112223322 10 00 123579999999
Q ss_pred CcEEEe
Q 013638 409 PHVLLG 414 (439)
Q Consensus 409 PtvLIG 414 (439)
+||+.-
T Consensus 235 aDvvyt 240 (328)
T 3grf_A 235 VDVVYT 240 (328)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 999974
No 454
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=44.97 E-value=29 Score=33.58 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHH
Q 013638 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQ 344 (439)
Q Consensus 302 V~LAgll~A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~ 344 (439)
+.++..+.|++....--.. ++++|.|| |..|..++.++..
T Consensus 153 ~~~~ta~~al~~~~~~~~g---~~vlV~GasggiG~~~~~~a~~ 193 (351)
T 1yb5_A 153 IPYFTAYRALIHSACVKAG---ESVLVHGASGGVGLAACQIARA 193 (351)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEEETCSSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhCCCCc---CEEEEECCCChHHHHHHHHHHH
Confidence 3455556666532222234 79999998 8888877766543
No 455
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=44.68 E-value=24 Score=34.29 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=21.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 225 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHS-----AGA------KRIIAVDL 225 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEEcC
Confidence 699999998777766554433 353 36777764
No 456
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=44.61 E-value=12 Score=38.19 Aligned_cols=35 Identities=29% Similarity=0.434 Sum_probs=27.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
--|||+|+|.||+..|-.+.+ .|+ ++.++++...+
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~-----~G~-------~V~vlEk~~~~ 76 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAAR-----AGA-------DVLVLERTSGW 76 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 469999999999999877654 354 58899887654
No 457
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=44.37 E-value=15 Score=36.68 Aligned_cols=27 Identities=15% Similarity=0.332 Sum_probs=22.7
Q ss_pred CCCcEEEeccCCCCCCCHHHHHHHhcc
Q 013638 407 VKPHVLLGLSGVGGVFNEEVKTYFLCF 433 (439)
Q Consensus 407 vkPtvLIG~S~~~G~FteevV~~Ma~~ 433 (439)
++++++|.+++..+.|.+..++.+++.
T Consensus 238 i~Ak~VV~ATG~~s~v~~~~~~~l~~~ 264 (344)
T 3jsk_A 238 INAPVIISTTGHDGPFGAFSVKRLVSM 264 (344)
T ss_dssp EECSEEEECCCSSSSSSCHHHHHHHHT
T ss_pred EEcCEEEECCCCCchhhHHHHHHHhhc
Confidence 568889999998888999999988754
No 458
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=44.30 E-value=9.1 Score=35.56 Aligned_cols=63 Identities=14% Similarity=0.219 Sum_probs=39.6
Q ss_pred CceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHH
Q 013638 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (439)
Q Consensus 323 ~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ 401 (439)
..+|+|.|| |-.|-.+++.+++ .|. +++.+++. ..-++. +..++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D~~-----------------d~~~~~ 48 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELNLL-----------------DSRAVH 48 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCCTT-----------------CHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCCcc-----------------CHHHHH
Confidence 378999996 7788887776654 342 46666543 001111 123477
Q ss_pred HHhccCCCcEEEeccCCC
Q 013638 402 EVVRKVKPHVLLGLSGVG 419 (439)
Q Consensus 402 eaV~~vkPtvLIG~S~~~ 419 (439)
++++.+++|++|=+.+..
T Consensus 49 ~~~~~~~~d~vih~a~~~ 66 (321)
T 1e6u_A 49 DFFASERIDQVYLAAAKV 66 (321)
T ss_dssp HHHHHHCCSEEEECCCCC
T ss_pred HHHHhcCCCEEEEcCeec
Confidence 788855699999887654
No 459
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=44.13 E-value=18 Score=33.65 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=26.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+... |.. .+++++|++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-----g~~-----~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-----HPH-----YKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-----CCC-----cEEEEEcCC
Confidence 6899999999999999987654 211 368888864
No 460
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=44.13 E-value=5.8 Score=38.33 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=54.4
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccc---cccCCCCCChhhhccccccCCcCCCCCCCC
Q 013638 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL---ITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (439)
Q Consensus 324 ~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GL---l~~~r~~L~~~k~~fA~~~~~~~~~~~~~s 399 (439)
.||+|.|| |..|..++..|+. .|.-...-...++++|...- +.....++.+...+|..+- ....+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di------~~~~~ 73 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGL------EATDD 73 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE------EEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCe------EeccC
Confidence 58999997 9999999887654 24310000126999997420 0000001111111222111 11246
Q ss_pred HHHHhccCCCcEEEeccCCCCC--------------CCHHHHHHHhccC
Q 013638 400 LLEVVRKVKPHVLLGLSGVGGV--------------FNEEVKTYFLCFI 434 (439)
Q Consensus 400 L~eaV~~vkPtvLIG~S~~~G~--------------FteevV~~Ma~~~ 434 (439)
+.+++++ +|++|=+.+.+.. .|.++++++.+++
T Consensus 74 ~~~a~~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~ 120 (327)
T 1y7t_A 74 PKVAFKD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVA 120 (327)
T ss_dssp HHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHhCC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8899987 9999976665432 3556677777775
No 461
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=44.02 E-value=20 Score=35.33 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=53.1
Q ss_pred HhCCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcC
Q 013638 313 AQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFM 392 (439)
Q Consensus 313 ~~g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~ 392 (439)
+....+++ +.||-|+|+|..|-.-++.+.........+. +.+ +=+-++|++- +.-+.+|+.-+.
T Consensus 18 ~~~~~Ms~--klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~-~~~-elvav~d~~~----------~~a~~~a~~~~~-- 81 (412)
T 4gqa_A 18 LYFQSMSA--RLNIGLIGSGFMGQAHADAYRRAAMFYPDLP-KRP-HLYALADQDQ----------AMAERHAAKLGA-- 81 (412)
T ss_dssp -------C--EEEEEEECCSHHHHHHHHHHHHHHHHCTTSS-SEE-EEEEEECSSH----------HHHHHHHHHHTC--
T ss_pred Cccccccc--cceEEEEcCcHHHHHHHHHHHhccccccccC-CCe-EEEEEEcCCH----------HHHHHHHHHcCC--
Confidence 33344443 3699999999887665555544322000111 011 1133455420 111233332110
Q ss_pred CCCCCCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhcc-----CCCCC
Q 013638 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLCF-----IPCFI 438 (439)
Q Consensus 393 ~~~~~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~~-----~~~pi 438 (439)
..-..++.|.++.-++|+++ +++ |..+-.+++.+-.+. |+||+
T Consensus 82 -~~~y~d~~~ll~~~~vD~V~-I~t-p~~~H~~~~~~al~aGkhVl~EKP~ 129 (412)
T 4gqa_A 82 -EKAYGDWRELVNDPQVDVVD-ITS-PNHLHYTMAMAAIAAGKHVYCEKPL 129 (412)
T ss_dssp -SEEESSHHHHHHCTTCCEEE-ECS-CGGGHHHHHHHHHHTTCEEEEESCS
T ss_pred -CeEECCHHHHhcCCCCCEEE-ECC-CcHHHHHHHHHHHHcCCCeEeecCC
Confidence 01246899999988889887 555 556666666554442 77775
No 462
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=43.99 E-value=12 Score=42.02 Aligned_cols=32 Identities=41% Similarity=0.725 Sum_probs=26.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|||+|||.||+..|..+... |. ++.++|+.
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~-----G~-------~V~lie~~ 160 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRS-----GA-------RVMLLDER 160 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------cEEEEeCC
Confidence 6799999999999999887653 43 69999985
No 463
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=43.84 E-value=12 Score=37.72 Aligned_cols=31 Identities=42% Similarity=0.594 Sum_probs=25.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
-.|+|+|||.||+..|..+.+ .|. ++.++|+
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk 40 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVL-----NGA-------RVACLDF 40 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEe
Confidence 689999999999999987765 353 6899983
No 464
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=43.50 E-value=33 Score=32.60 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=22.0
Q ss_pred ceEEEeC-chhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~G-AGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++++|.| +|..|..++.+... .|. +++.+|+
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKM-----KGA-------HTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 7999999 68888777665543 343 5777776
No 465
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=43.21 E-value=17 Score=34.75 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=26.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.++|..+..+ |. +++++|+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 6899999999999999988764 43 67888874
No 466
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=43.20 E-value=14 Score=36.87 Aligned_cols=34 Identities=29% Similarity=0.598 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
.+|+|+|||.||+..|..+.+. |. .++.++++..
T Consensus 5 ~~~~iiG~G~~g~~~a~~l~~~-----g~------~~v~~~e~~~ 38 (472)
T 1b37_A 5 PRVIVVGAGMSGISAAKRLSEA-----GI------TDLLILEATD 38 (472)
T ss_dssp CCEEEECCBHHHHHHHHHHHHT-----TC------CCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhc-----CC------CceEEEeCCC
Confidence 6899999999999998887653 43 2577777754
No 467
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=42.94 E-value=17 Score=35.26 Aligned_cols=97 Identities=20% Similarity=0.251 Sum_probs=54.3
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC-CCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~-r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
||.|+|||+.|.++|..|... |+- ..+.++|.+-=..++ .-+|.+...+|-.+. .. ....+ .++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~~-----~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~-~i---~~t~d-~~a 66 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYP-KI---VGGAD-YSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCC-EE---EEESC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECChHHHHHHHHHHHhhhhhcCCCC-EE---EEeCC-HHH
Confidence 799999999999999876553 432 479999974311110 001222221121111 00 01234 788
Q ss_pred hccCCCcEEEeccCCC---CC-----------CCHHHHHHHhccCCCCC
Q 013638 404 VRKVKPHVLLGLSGVG---GV-----------FNEEVKTYFLCFIPCFI 438 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~---G~-----------FteevV~~Ma~~~~~pi 438 (439)
+++ +|++|=+.+.| |- +-+++++.+.++++.-+
T Consensus 67 ~~~--aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~ 113 (294)
T 1oju_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESK 113 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCE
T ss_pred hCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 888 89887444433 32 12466677777776543
No 468
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=42.93 E-value=13 Score=35.04 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988763 43 68888874
No 469
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=42.69 E-value=16 Score=34.27 Aligned_cols=32 Identities=28% Similarity=0.409 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5899999999999999988664 42 67778874
No 470
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=42.60 E-value=3.1 Score=40.32 Aligned_cols=134 Identities=12% Similarity=0.100 Sum_probs=73.9
Q ss_pred eeEEEEecCceeeccCCCCCCcccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCcccccccccCCChhhhhHh
Q 013638 172 VDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSI 251 (439)
Q Consensus 172 v~viVVTDG~rILGLGDlG~~Gm~I~iGKl~LY~a~aGI~P~~~LPV~LDvGTnn~~Ll~Dp~YlG~r~~R~~g~~y~~~ 251 (439)
.++.||||.+.=|---..-- -||. .+|+.+-+| ++..+++ . +--
T Consensus 4 Mki~IvtDSt~dl~~e~~~~----------------~~I~---vvPl~v~~~--~~~y~D~-------------~--di~ 47 (285)
T 3lup_A 4 MKLALITDTSAYLPEAIENH----------------EDVY---VLDIPIIID--GKTYIEG-------------Q--NLT 47 (285)
T ss_dssp CCEEEEEETTBCCCTTTTTC----------------TTEE---EECCCEESS--SSCCCBT-------------T--TBC
T ss_pred CCEEEEEECCCCCCHHHHHH----------------CCeE---EEEEEEEEC--CEEEecC-------------C--CCC
Confidence 47999999986553222111 1344 677777664 3333332 1 123
Q ss_pred HHHHHHHHHH--hCCce-EEEEecCCCchHHHHHHHHhh----cc--cccccCcchhHHHHHHHHHHHHHHhCCCccCCC
Q 013638 252 VDEFMEAVHA--RWPKA-IVQFEDFQMKWAFETLERYRK----RF--CMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFA 322 (439)
Q Consensus 252 vdefv~av~~--~~P~~-~IqfEDf~~~naf~iL~ryr~----~~--~~FNDDiQGTaaV~LAgll~A~r~~g~~l~dl~ 322 (439)
.+||.+.+++ ..|+. ....+|| .++| +++.+ .+ -++.--.=||-..+. .......+
T Consensus 48 ~~efy~~~~~~~~~p~TSqps~~~~--~~~f---~~l~~~g~d~ii~i~iSs~LSGTy~sA~--------~a~~~~~~-- 112 (285)
T 3lup_A 48 LDQYYDKLAASKELPKTSQPSLAEL--DDLL---CQLEKEGYTHVLGLFIAAGISGFWQNIQ--------FLIEEHPN-- 112 (285)
T ss_dssp HHHHHHHHHHCSSCCEECCCCHHHH--HHHH---HHHHHTTCCEEEECCSCGGGCTHHHHHT--------THHHHCTT--
T ss_pred HHHHHHHHHhCCCCceeCCCCHHHH--HHHH---HHHHHcCCCeEEEEeCCCchhHHHHHHH--------HHHHhCCC--
Confidence 5888888875 35765 4444444 2333 22222 22 344555555533322 11123344
Q ss_pred CceEEEeCchhHHHHHHHHHHHH--HHHHcCCChhhhc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQA--AARMAGNNDAFAR 358 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~--~~~~~Gls~eeA~ 358 (439)
.+|-++=..+++.|..-+...+ |. ++|.|.||..
T Consensus 113 -~~I~ViDS~~~s~g~g~~v~~A~~l~-~~G~s~eeI~ 148 (285)
T 3lup_A 113 -LTIAFPDTKITSAPQGNLVRNALMCS-REGMDFDVIV 148 (285)
T ss_dssp -SEEECCCCCCCHHHHHHHHHHHHHHH-TTTCCHHHHH
T ss_pred -CCEEEEcCCchHHHHHHHHHHHHHHH-HcCCCHHHHH
Confidence 6888888877777777666664 44 6899988743
No 471
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=42.39 E-value=13 Score=33.50 Aligned_cols=90 Identities=12% Similarity=0.134 Sum_probs=48.6
Q ss_pred ceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.+|+|.|| |-.|..+++.+++ .|- -++++++++.- .-..+......+..- +. .+..++.+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~~---~~~~~~~~~~~~~~~--Dl---~d~~~~~~ 84 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQPA---KIHKPYPTNSQIIMG--DV---LNHAALKQ 84 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSGG---GSCSSCCTTEEEEEC--CT---TCHHHHHH
T ss_pred cEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcChh---hhcccccCCcEEEEe--cC---CCHHHHHH
Confidence 68999995 7777777766654 341 26777776421 001111111111110 00 12245788
Q ss_pred HhccCCCcEEEeccCCCCC--CCHHHHHHHhccC
Q 013638 403 VVRKVKPHVLLGLSGVGGV--FNEEVKTYFLCFI 434 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~G~--FteevV~~Ma~~~ 434 (439)
+++. .|++|=+.+.... -++.+++.|.+..
T Consensus 85 ~~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~ 116 (236)
T 3qvo_A 85 AMQG--QDIVYANLTGEDLDIQANSVIAAMKACD 116 (236)
T ss_dssp HHTT--CSEEEEECCSTTHHHHHHHHHHHHHHTT
T ss_pred HhcC--CCEEEEcCCCCchhHHHHHHHHHHHHcC
Confidence 8887 7999865543222 2566777776643
No 472
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=42.08 E-value=14 Score=35.01 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=25.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 6899999999999999887643 43 57788764
No 473
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=42.01 E-value=16 Score=38.87 Aligned_cols=32 Identities=25% Similarity=0.508 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.+|+|+|||.||+..|..+... |. ++.++++.
T Consensus 108 ~~v~viG~G~~gl~~a~~l~~~-----g~-------~v~~~e~~ 139 (662)
T 2z3y_A 108 GKVIIIGSGVSGLAAARQLQSF-----GM-------DVTLLEAR 139 (662)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEecC
Confidence 7999999999999999888653 43 57777765
No 474
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=41.81 E-value=53 Score=30.31 Aligned_cols=36 Identities=31% Similarity=0.411 Sum_probs=23.1
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
++++++||.||++ ||...|+..+. ++|. +++++|++
T Consensus 12 ~~~k~vlVTGas~---GIG~aia~~l~-~~G~-------~V~~~~r~ 47 (269)
T 3vtz_A 12 FTDKVAIVTGGSS---GIGLAVVDALV-RYGA-------KVVSVSLD 47 (269)
T ss_dssp TTTCEEEESSTTS---HHHHHHHHHHH-HTTC-------EEEEEESC
T ss_pred CCCCEEEEeCCCC---HHHHHHHHHHH-HCCC-------EEEEEeCC
Confidence 4449999999854 34444555555 3564 68888764
No 475
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=41.35 E-value=19 Score=33.01 Aligned_cols=40 Identities=23% Similarity=0.389 Sum_probs=23.7
Q ss_pred CCccCCCCceEEEeCch-hHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 316 LSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 316 ~~l~dl~~~riv~~GAG-sAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+++.+|++.++||.||+ ..|.++|+.+ . +.|. +++++|++
T Consensus 22 ~~m~~l~~k~vlITGas~gIG~~la~~l----~-~~G~-------~V~~~~r~ 62 (262)
T 3rkr_A 22 KHMSSLSGQVAVVTGASRGIGAAIARKL----G-SLGA-------RVVLTARD 62 (262)
T ss_dssp ---CTTTTCEEEESSTTSHHHHHHHHHH----H-HTTC-------EEEEEESC
T ss_pred chhhccCCCEEEEECCCChHHHHHHHHH----H-HCCC-------EEEEEECC
Confidence 44555666999999974 3444444444 4 3453 68888874
No 476
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=41.21 E-value=21 Score=34.51 Aligned_cols=31 Identities=23% Similarity=0.393 Sum_probs=25.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
+||-|+|-|..|.++|+.|+++ |. +++.+|+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~-----G~-------~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred CEEEEeeehHHHHHHHHHHHhC-----CC-------eEEEEcC
Confidence 4899999999999999998764 43 5777776
No 477
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=41.21 E-value=12 Score=36.48 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=25.8
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 323 ~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
..+|.|+|+|..|..+|..+... |. +++++|+.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~ 48 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRS 48 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCT
T ss_pred CCEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECC
Confidence 37999999999999999887653 43 57777764
No 478
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=41.08 E-value=34 Score=33.13 Aligned_cols=96 Identities=14% Similarity=0.144 Sum_probs=53.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccC-CCCCChhhhccccccCCcCCCCCCCCHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~-r~~L~~~k~~fA~~~~~~~~~~~~~sL~e 402 (439)
.||.|+|||+.|..+|-.|.. .|+- ..++++|.+-=..++ ..+|.+. .++... ++. -..+..+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~-----~~~~-----~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~--~~~---v~~~~~~ 70 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVN-----QSIV-----DELVIIDLDTEKVRGDVMDLKHA-TPYSPT--TVR---VKAGEYS 70 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HCSC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSSS--CCE---EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHhhhhhhhHHhh-hhhcCC--CeE---EEeCCHH
Confidence 699999999999998887654 2442 579999975200000 0122222 233311 000 0113477
Q ss_pred HhccCCCcEEEeccCCCCC--------------CCHHHHHHHhccCCCC
Q 013638 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVKTYFLCFIPCF 437 (439)
Q Consensus 403 aV~~vkPtvLIG~S~~~G~--------------FteevV~~Ma~~~~~p 437 (439)
++++ +|++|=+.+.|.. +=+++++.|.++++.-
T Consensus 71 a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a 117 (317)
T 3d0o_A 71 DCHD--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDG 117 (317)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 7887 8988855544421 1245666666676543
No 479
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=41.02 E-value=29 Score=33.25 Aligned_cols=44 Identities=18% Similarity=0.330 Sum_probs=27.9
Q ss_pred HHHHHHHhCCCccCCCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 307 LLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 307 ll~A~r~~g~~l~dl~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
.+.|++..+.+ .. ++++|.|| |..|..++.++.. .|. +++.+|+
T Consensus 158 a~~~l~~~~~~-~g---~~vlV~Ga~ggiG~~~~~~a~~-----~Ga-------~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSANLM-AG---HWVAISGAAGGLGSLAVQYAKA-----MGY-------RVLGIDG 202 (347)
T ss_dssp HHHHHHTTTCC-TT---CEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEEC
T ss_pred HHHHHHhcCCC-CC---CEEEEECCCchHHHHHHHHHHH-----CCC-------cEEEEcC
Confidence 35555544332 23 69999999 7778777765543 342 6777775
No 480
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=41.02 E-value=25 Score=34.08 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=21.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEec
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs 366 (439)
++|+|+|+|..|...+.+... .|. +++.+|+
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSS 221 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEec
Confidence 699999999777766554432 353 5777775
No 481
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=41.01 E-value=16 Score=34.82 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=26.1
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 7999999999999999988664 43 57777764
No 482
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=41.00 E-value=16 Score=38.53 Aligned_cols=35 Identities=34% Similarity=0.350 Sum_probs=27.4
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl 370 (439)
-.|||+|||.||+..|-.+.+ .|+ ++.++++....
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~-----~G~-------~V~vlEK~~~~ 42 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQ-----SGQ-------TCALLSKVFPT 42 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCGG
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEecCCCC
Confidence 579999999999999877654 353 68999987543
No 483
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=46.94 E-value=5.8 Score=36.02 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=19.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQA 345 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~ 345 (439)
.||.|+|+|..|..+|..+...
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~ 41 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQC 41 (201)
Confidence 7999999999999999988764
No 484
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=40.72 E-value=18 Score=35.35 Aligned_cols=96 Identities=20% Similarity=0.220 Sum_probs=54.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc--ccccCC-CCCChhhhccccccCCcCCCCCCCCH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--LITKER-KNLDPAAAPFAKDPGDFMGLREGASL 400 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G--Ll~~~r-~~L~~~k~~fA~~~~~~~~~~~~~sL 400 (439)
.||.|+|||..|.++|..+.. .|+ ..+.++|.+- -..++. .+|.+. .++....... ...+-
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i----~~t~d 72 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANI----IGTSD 72 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCE----EEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEE----EEcCC
Confidence 799999999999999988765 354 2799999862 111111 122221 1332211110 00112
Q ss_pred HHHhccCCCcEEEeccCCC---CC-----------CCHHHHHHHhccCCCC
Q 013638 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVKTYFLCFIPCF 437 (439)
Q Consensus 401 ~eaV~~vkPtvLIG~S~~~---G~-----------FteevV~~Ma~~~~~p 437 (439)
.+++++ +|++|=+.+.| |- +-+++++.++++++.-
T Consensus 73 ~~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a 121 (315)
T 3tl2_A 73 YADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNA 121 (315)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 467777 89887544433 31 2356777777777653
No 485
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=40.59 E-value=15 Score=39.81 Aligned_cols=32 Identities=25% Similarity=0.524 Sum_probs=25.8
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
-.|+|+|||.||+..|-.+.. .|+ ++.++|+.
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr-----~G~-------kVlLIEk~ 60 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAAR-----MGQ-------QTLLLTHN 60 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECChHHHHHHHHHHHh-----CCC-------CEEEEeec
Confidence 579999999999999877654 354 68889875
No 486
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=40.58 E-value=23 Score=33.41 Aligned_cols=80 Identities=15% Similarity=0.299 Sum_probs=43.6
Q ss_pred CCCceEEEeCc-hhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCCh-hhhccccccCCcCCCCCCC
Q 013638 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGA 398 (439)
Q Consensus 321 l~~~riv~~GA-GsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~-~k~~fA~~~~~~~~~~~~~ 398 (439)
+...+|+|.|| |-.|..+++.+++ .| .+++.+|+..- .....+.. .+..+..- +. .+..
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~l~~~~~~~~~~~--Dl---~d~~ 79 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFAT--GRREHLKDHPNLTFVEG--SI---ADHA 79 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS--CCGGGSCCCTTEEEEEC--CT---TCHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCCc--cchhhHhhcCCceEEEE--eC---CCHH
Confidence 44489999996 7777777776654 34 26888887421 00011111 01111110 00 1223
Q ss_pred CHHHHhccCCCcEEEeccCCC
Q 013638 399 SLLEVVRKVKPHVLLGLSGVG 419 (439)
Q Consensus 399 sL~eaV~~vkPtvLIG~S~~~ 419 (439)
++.++++..++|++|=+.+..
T Consensus 80 ~~~~~~~~~~~D~vih~A~~~ 100 (333)
T 2q1w_A 80 LVNQLIGDLQPDAVVHTAASY 100 (333)
T ss_dssp HHHHHHHHHCCSEEEECCCCC
T ss_pred HHHHHHhccCCcEEEECceec
Confidence 577788777899999777643
No 487
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=40.54 E-value=21 Score=34.19 Aligned_cols=99 Identities=12% Similarity=0.029 Sum_probs=53.0
Q ss_pred CCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCe-EEEEecccccccCCCCCChhhhccccccCCcCCCCCCCC
Q 013638 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNK-FFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (439)
Q Consensus 321 l~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~-i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~s 399 (439)
+++.||-|+|+|..|-.-++.+...-. -..+. ..-+ ..++|++ .+.-+.+|+.-.. ..-..+
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~-~~~~~---~~~~l~av~d~~----------~~~a~~~a~~~g~---~~~~~d 66 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPR-FFDLP---LHPDLNVLCGRD----------AEAVRAAAGKLGW---STTETD 66 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHH-HSCCS---SEEEEEEEECSS----------HHHHHHHHHHHTC---SEEESC
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCcc-ccccc---cCceEEEEEcCC----------HHHHHHHHHHcCC---CcccCC
Confidence 344899999999887655554443211 01111 0112 3345542 0111233332110 012467
Q ss_pred HHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc-----cCCCCC
Q 013638 400 LLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC-----FIPCFI 438 (439)
Q Consensus 400 L~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~-----~~~~pi 438 (439)
+.|.++.-++|+++ +++ |..+-.+++.+-.+ .|+||+
T Consensus 67 ~~~ll~~~~iDaV~-I~t-P~~~H~~~~~~al~aGkhVl~EKPl 108 (390)
T 4h3v_A 67 WRTLLERDDVQLVD-VCT-PGDSHAEIAIAALEAGKHVLCEKPL 108 (390)
T ss_dssp HHHHTTCTTCSEEE-ECS-CGGGHHHHHHHHHHTTCEEEEESSS
T ss_pred HHHHhcCCCCCEEE-EeC-ChHHHHHHHHHHHHcCCCceeecCc
Confidence 99999988888887 554 56666666655444 367775
No 488
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=40.37 E-value=30 Score=33.11 Aligned_cols=89 Identities=17% Similarity=0.046 Sum_probs=49.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
.||.|+|+|..|...++.+... .+. +-+.++|++- +..+.+++.-.. ....++.|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~----~~~------~l~av~d~~~----------~~~~~~a~~~g~----~~~~~~~~~ 60 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN----PDL------ELVVIADPFI----------EGAQRLAEANGA----EAVASPDEV 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----TTE------EEEEEECSSH----------HHHHHHHHTTTC----EEESSHHHH
T ss_pred eEEEEECCcHHHHHHHHHHHhC----CCc------EEEEEECCCH----------HHHHHHHHHcCC----ceeCCHHHH
Confidence 6999999999887766554331 121 1233566521 111233332110 124679999
Q ss_pred hccCCCcEEEeccCCCCCCCHHHHHHHhcc-----CCCCC
Q 013638 404 VRKVKPHVLLGLSGVGGVFNEEVKTYFLCF-----IPCFI 438 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~G~FteevV~~Ma~~-----~~~pi 438 (439)
++.-++|+++ +++ |.....++++...+. |+||+
T Consensus 61 l~~~~~D~V~-i~t-p~~~h~~~~~~al~~gk~v~~EKP~ 98 (344)
T 3euw_A 61 FARDDIDGIV-IGS-PTSTHVDLITRAVERGIPALCEKPI 98 (344)
T ss_dssp TTCSCCCEEE-ECS-CGGGHHHHHHHHHHTTCCEEECSCS
T ss_pred hcCCCCCEEE-EeC-CchhhHHHHHHHHHcCCcEEEECCC
Confidence 9976789888 444 455556666555432 55664
No 489
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=40.17 E-value=19 Score=35.16 Aligned_cols=40 Identities=8% Similarity=-0.029 Sum_probs=28.4
Q ss_pred CCCHHHHhccCCCcEEEeccCCCCCCCHHHHHHHhc-----cCCCCC
Q 013638 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVKTYFLC-----FIPCFI 438 (439)
Q Consensus 397 ~~sL~eaV~~vkPtvLIG~S~~~G~FteevV~~Ma~-----~~~~pi 438 (439)
..++.|+++.-.+|+++ +++ |.....++++...+ .|+||+
T Consensus 72 ~~~~~~ll~~~~iD~V~-i~t-p~~~h~~~~~~al~~Gk~V~~EKP~ 116 (383)
T 3oqb_A 72 TTDLDAALADKNDTMFF-DAA-TTQARPGLLTQAINAGKHVYCEKPI 116 (383)
T ss_dssp ESCHHHHHHCSSCCEEE-ECS-CSSSSHHHHHHHHTTTCEEEECSCS
T ss_pred cCCHHHHhcCCCCCEEE-ECC-CchHHHHHHHHHHHCCCeEEEcCCC
Confidence 46899999988899888 555 45666777665554 366675
No 490
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=40.04 E-value=16 Score=35.09 Aligned_cols=32 Identities=28% Similarity=0.515 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 6999999999999999988764 43 57777764
No 491
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=40.04 E-value=15 Score=37.73 Aligned_cols=33 Identities=33% Similarity=0.622 Sum_probs=26.2
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEeccc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~G 368 (439)
-.++|+|+|+||+-+|..|.+. |+ ++.++++.+
T Consensus 8 ~D~iIvG~G~aG~~~A~~L~~~-----g~-------~VlvlE~g~ 40 (546)
T 1kdg_A 8 YDYIIVGAGPGGIIAADRLSEA-----GK-------KVLLLERGG 40 (546)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSC
T ss_pred eeEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 4689999999999999887653 43 688887754
No 492
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=39.97 E-value=16 Score=34.15 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=26.0
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----GF-------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 3799999999999999988765 42 57778874
No 493
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=39.97 E-value=18 Score=34.97 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=25.9
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|||..|.++|..+.. .|+- .++++|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~~------~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KELG------DIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCS------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCCC------eEEEEeCC
Confidence 589999999999999987644 3531 39999974
No 494
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=39.90 E-value=15 Score=36.49 Aligned_cols=80 Identities=18% Similarity=0.213 Sum_probs=45.6
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
.||+|+|||.+|-.+|+.|.+. .++.++|+. .++ +......+....-+. .+..+|.++
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~--a~~la~~~~~~~~d~---~~~~~l~~l 74 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN--LEKVKEFATPLKVDA---SNFDKLVEV 74 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH--HHHHTTTSEEEECCT---TCHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH--HHHHHhhCCeEEEec---CCHHHHHHH
Confidence 7999999999999998877542 268888873 111 111111110000000 112468888
Q ss_pred hccCCCcEEEeccCCCCCCCHHHHHH
Q 013638 404 VRKVKPHVLLGLSGVGGVFNEEVKTY 429 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~G~FteevV~~ 429 (439)
+++ +|++|-+. |..+..+++++
T Consensus 75 l~~--~DvVIn~~--P~~~~~~v~~a 96 (365)
T 2z2v_A 75 MKE--FELVIGAL--PGFLGFKSIKA 96 (365)
T ss_dssp HTT--CSCEEECC--CHHHHHHHHHH
T ss_pred HhC--CCEEEECC--ChhhhHHHHHH
Confidence 886 89998763 33345555554
No 495
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=39.79 E-value=16 Score=34.15 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=25.5
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 6899999999999999887643 43 57788864
No 496
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=39.68 E-value=10 Score=36.80 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=25.0
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||.|+|+|..|..+|..+..+ | .+++++|+.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-----C-------REVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-----E-------EEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEECC
Confidence 899999999999999887653 3 267888874
No 497
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=39.47 E-value=12 Score=38.68 Aligned_cols=39 Identities=8% Similarity=0.106 Sum_probs=25.9
Q ss_pred CCCccCCCCceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 315 GLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 315 g~~l~dl~~~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
+..++. .+|+|+|||.+|-.+|..|.+. .| .+|+++|+.
T Consensus 18 ~~~l~~---k~VlIiGAGgiG~aia~~L~~~----~g-------~~V~v~~R~ 56 (467)
T 2axq_A 18 EGRHMG---KNVLLLGSGFVAQPVIDTLAAN----DD-------INVTVACRT 56 (467)
T ss_dssp -----C---EEEEEECCSTTHHHHHHHHHTS----TT-------EEEEEEESS
T ss_pred ccCCCC---CEEEEECChHHHHHHHHHHHhC----CC-------CeEEEEECC
Confidence 344455 8999999999999988876542 12 258888874
No 498
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=39.35 E-value=14 Score=34.40 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=24.8
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 325 riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 799999999999999887653 43 57888864
No 499
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=39.34 E-value=15 Score=34.19 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=25.3
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecc
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~ 367 (439)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 3899999999999999887653 42 57888864
No 500
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=39.19 E-value=26 Score=33.58 Aligned_cols=90 Identities=8% Similarity=-0.083 Sum_probs=49.7
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHHHcCCChhhhcCeEEEEecccccccCCCCCChhhhccccccCCcCCCCCCCCHHHH
Q 013638 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (439)
Q Consensus 324 ~riv~~GAGsAgiGiA~li~~~~~~~~Gls~eeA~~~i~lvDs~GLl~~~r~~L~~~k~~fA~~~~~~~~~~~~~sL~ea 403 (439)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ .+..+.++..-.. .....++.|+
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----------~~~~~~~~~~~~~---~~~~~~~~~l 62 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRE----SAQA------EVRGIASRR----------LENAQKMAKELAI---PVAYGSYEEL 62 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHH----SSSE------EEEEEBCSS----------SHHHHHHHHHTTC---CCCBSSHHHH
T ss_pred EEEEEECchHHHHHHHHHHHh----CCCc------EEEEEEeCC----------HHHHHHHHHHcCC---CceeCCHHHH
Confidence 799999999988766555432 1121 112345542 1112233332110 0124689999
Q ss_pred hccCCCcEEEeccCCCCCCCHHHHHHHhcc-----CCCCC
Q 013638 404 VRKVKPHVLLGLSGVGGVFNEEVKTYFLCF-----IPCFI 438 (439)
Q Consensus 404 V~~vkPtvLIG~S~~~G~FteevV~~Ma~~-----~~~pi 438 (439)
++.-++|+++ +++ |.....++++...+. |+||+
T Consensus 63 l~~~~~D~V~-i~t-p~~~h~~~~~~al~~gk~vl~EKP~ 100 (330)
T 3e9m_A 63 CKDETIDIIY-IPT-YNQGHYSAAKLALSQGKPVLLEKPF 100 (330)
T ss_dssp HHCTTCSEEE-ECC-CGGGHHHHHHHHHHTTCCEEECSSC
T ss_pred hcCCCCCEEE-EcC-CCHHHHHHHHHHHHCCCeEEEeCCC
Confidence 9877799888 444 444555665554332 56664
Done!