BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013641
(439 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99JW2|ACY1_MOUSE Aminoacylase-1 OS=Mus musculus GN=Acy1 PE=1 SV=1
Length = 408
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/407 (43%), Positives = 246/407 (60%), Gaps = 16/407 (3%)
Query: 28 EREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGS 87
E +T F+QYLR T PNP+Y ++FL +A+ +GL + +E VP I +LTWPG+
Sbjct: 9 EHPSVTLFRQYLRICTVQPNPDYGGAITFLEERARQLGLSCQKIEVVPGFVITVLTWPGT 68
Query: 88 DPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRN 147
+PSLPSIL NSH D VP + W H PF AF E G I+ARGSQD K ++IQY+EA+R
Sbjct: 69 NPSLPSILLNSHTDVVPVFKEHWHHDPFEAFKDSE-GYIYARGSQDMKSVSIQYLEAVRR 127
Query: 148 LILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRV 207
L + P RT+H ++VPDEE+GG GM FV+ EF+ L GF +DEG A+ D F V
Sbjct: 128 LKSEGHRFP-RTIHMTFVPDEEVGGHKGMELFVKRPEFQALRAGFALDEGLANPTDAFTV 186
Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG-RAANS 266
FY++RSPW + + + G PGH SR ++ A E L K + I FRE + ++A
Sbjct: 187 FYSERSPWWVRVTSTGKPGHASRFIEDTAAEKLHKVISSILAFREKERQRLQANPHLKEG 246
Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
V SVNL L+ G+ N+ P+ A FD R+ P VD +++ A
Sbjct: 247 AVTSVNLTKLEGGV------AYNVVPATMSASFDFRVAPDVDMKAFEKQLQRWCQEAGEG 300
Query: 327 MSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMR 386
+++E +K P MT TDDS+PWW+ F A + L +PEI + TD+RY+R
Sbjct: 301 VTFEFAQKF------TEPRMTPTDDSDPWWAAFSGACKAMNLTL-EPEIFPAATDSRYIR 353
Query: 387 QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433
+GIP LGFSPM TP+LLHDHNE L + +FL+GV++Y ++S+L+S
Sbjct: 354 AVGIPALGFSPMNRTPVLLHDHNERLHEDIFLRGVDIYTGLLSALAS 400
>sp|Q6PTT0|ACY1B_RAT Aminoacylase-1B OS=Rattus norvegicus GN=Acy1b PE=1 SV=1
Length = 408
Score = 337 bits (864), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/415 (42%), Positives = 247/415 (59%), Gaps = 17/415 (4%)
Query: 20 TSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPI 79
TS G EE +T F+QYLR T P P+Y A V+F A+ +GL + +E P +
Sbjct: 2 TSKGPE-EEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV 60
Query: 80 LLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAI 139
+LTWPG++P+L SIL NSH D VP + WSH PF AF E G I+ RG+QD KC++I
Sbjct: 61 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSE-GYIYTRGAQDMKCVSI 119
Query: 140 QYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 199
QY+EA++ L + + P RT+H ++VPDEE+GG GM FV+ +EF L GF +DEG A
Sbjct: 120 QYLEAVKRLKVEGHRFP-RTIHMTFVPDEEVGGHQGMELFVQRHEFHALRAGFALDEGLA 178
Query: 200 STNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVK 259
+ D F VFY++RSPW + + + G PGH SR ++ A E L K V I FRE ++ ++
Sbjct: 179 NPTDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQ 238
Query: 260 AG-RAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAE 318
+ V SVNL L+ G+ N+ P+ A FD R+ P VD ++
Sbjct: 239 SNPHLKEGSVTSVNLTKLEGGV------AYNVVPATMSACFDFRVAPDVDMKAFEEQLQS 292
Query: 319 EWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS 378
A +++E +K P MT TDD++PWW+ F A L +PEI +
Sbjct: 293 WCQEAGEGVTFEFAQKF------TEPRMTPTDDTDPWWAAFSGACKEMTLTL-EPEIFPA 345
Query: 379 TTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433
TD+RY+R +GIP LGFSPM TP+LLHDHNE L + VFL+GV++Y ++++L+S
Sbjct: 346 ATDSRYIRAVGIPALGFSPMNRTPVLLHDHNERLHEAVFLRGVDIYTRLVAALAS 400
>sp|P37111|ACY1_PIG Aminoacylase-1 OS=Sus scrofa GN=ACY1 PE=1 SV=2
Length = 407
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/413 (41%), Positives = 248/413 (60%), Gaps = 16/413 (3%)
Query: 22 SGKSHEEREP-ITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPIL 80
+ K E P +T F+QYLR T P P+Y A V+FL +A+ +GL + +E VP +
Sbjct: 2 ASKGREGEHPSVTLFRQYLRIRTVQPEPDYGAAVAFLEERARQLGLGCQKVEVVPGHVVT 61
Query: 81 LLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQ 140
+LTWPG++P+L SIL NSH D VP + WSH PF F + G I+ RG+QD KC++IQ
Sbjct: 62 VLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEGFKDAD-GYIYGRGAQDMKCVSIQ 120
Query: 141 YIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQAS 200
Y+EA+R L + + P RT+H ++VPDEE+GG GM FV+ EF+ L GF +DEG AS
Sbjct: 121 YLEAVRRLKVEGHHFP-RTIHMTFVPDEEVGGHQGMELFVKRPEFQALRAGFALDEGLAS 179
Query: 201 TNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKA 260
D F VFY++RSPW L + + G PGHGSR ++ A E L K + I FRE + +++
Sbjct: 180 PTDAFTVFYSERSPWWLRVTSTGKPGHGSRFIEDTAAEKLHKVINSILAFREKEKQRLQS 239
Query: 261 GRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEW 320
+ V SVNL L+ G+ N+ P+ A FD R+ P VD ++
Sbjct: 240 NQLKPGAVTSVNLTMLEGGV------AYNVVPATMSACFDFRVAPDVDLKAFEEQLQSWC 293
Query: 321 APAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTT 380
A +++E ++K +T TDDS+PWW+ F L + EI ++T
Sbjct: 294 QAAGEGVTFEFVQKWM------ETQVTSTDDSDPWWAAFSGVFKDMKLAL-ELEICPAST 346
Query: 381 DARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433
DARY+R G+P LGFSPM +TP+LLHDH+E L + VFL+GV++Y ++S+L+S
Sbjct: 347 DARYIRAAGVPALGFSPMNHTPVLLHDHDERLHEAVFLRGVDIYTQLLSALAS 399
>sp|Q5RFB0|ACY1_PONAB Aminoacylase-1 OS=Pongo abelii GN=ACY1 PE=2 SV=2
Length = 408
Score = 335 bits (860), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/415 (42%), Positives = 246/415 (59%), Gaps = 17/415 (4%)
Query: 20 TSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPI 79
TS G EE +T F+QYLR T P P+Y A V+F +A+ +GL + +E P +
Sbjct: 2 TSKGPE-EEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEERARQLGLGCQKVEVAPGYVV 60
Query: 80 LLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAI 139
+LTWPG++P+L SIL NSH D VP + WSH PF AF E G I+ARG+QD KCI+I
Sbjct: 61 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSE-GYIYARGAQDMKCISI 119
Query: 140 QYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 199
QY+EA+R L + + P RT+H ++VPDEE+GG GM FV+ EF L GF +DEG A
Sbjct: 120 QYLEAVRRLKVEGHRFP-RTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIA 178
Query: 200 STNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVK 259
+ D F VFY++RSPW + + + G PGH SR ++ A E L K V I FRE ++ ++
Sbjct: 179 NPTDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVSSILAFREKEWQRLQ 238
Query: 260 AG-RAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAE 318
+ V SVNL L+ G+ N+ P+ A FD R+ P VD ++
Sbjct: 239 SNPHLKEGSVTSVNLTKLEGGV------AYNVIPATMSASFDFRVAPDVDFKAFEEQLQS 292
Query: 319 EWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS 378
A ++ E +K P +T TDDSNPWW+ F R L +PEI+ +
Sbjct: 293 WCQAAGEGVTLEFAQKW------MHPQVTPTDDSNPWWAAFSRVCKDMKLTL-EPEIMPA 345
Query: 379 TTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433
TD RY+R +GIP LGFSPM TP+LLHDH+E L + VFL+GV++Y ++ +L+S
Sbjct: 346 ATDNRYIRAVGIPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALAS 400
>sp|Q03154|ACY1_HUMAN Aminoacylase-1 OS=Homo sapiens GN=ACY1 PE=1 SV=1
Length = 408
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/415 (42%), Positives = 245/415 (59%), Gaps = 17/415 (4%)
Query: 20 TSSGKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPI 79
TS G EE +T F+QYLR T P P+Y A V+F A+ +GL + +E P +
Sbjct: 2 TSKGPE-EEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVV 60
Query: 80 LLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAI 139
+LTWPG++P+L SIL NSH D VP + WSH PF AF E G I+ARG+QD KC++I
Sbjct: 61 TVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSE-GYIYARGAQDMKCVSI 119
Query: 140 QYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 199
QY+EA+R L V+ + RT+H ++VPDEE+GG GM FV+ EF L GF +DEG A
Sbjct: 120 QYLEAVRRL-KVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIA 178
Query: 200 STNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVK 259
+ D F VFY++RSPW + + + G PGH SR ++ A E L K V I FRE ++ ++
Sbjct: 179 NPTDAFTVFYSERSPWWVRVTSTGRPGHASRFMEDTAAEKLHKVVNSILAFREKEWQRLQ 238
Query: 260 AG-RAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAE 318
+ V SVNL L+ G+ N+ P+ A FD R+ P VD ++
Sbjct: 239 SNPHLKEGSVTSVNLTKLEGGV------AYNVIPATMSASFDFRVAPDVDFKAFEEQLQS 292
Query: 319 EWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS 378
A ++ E +K P +T TDDSNPWW+ F R L +PEI+ +
Sbjct: 293 WCQAAGEGVTLEFAQKW------MHPQVTPTDDSNPWWAAFSRVCKDMNLTL-EPEIMPA 345
Query: 379 TTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433
TD RY+R +G+P LGFSPM TP+LLHDH+E L + VFL+GV++Y ++ +L+S
Sbjct: 346 ATDNRYIRAVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALAS 400
>sp|Q6AYS7|ACY1A_RAT Aminoacylase-1A OS=Rattus norvegicus GN=Acy1a PE=1 SV=1
Length = 408
Score = 332 bits (851), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/407 (42%), Positives = 243/407 (59%), Gaps = 16/407 (3%)
Query: 28 EREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGS 87
E +T F+QYLR T PNP+Y + V+FL +A+ +GL + +E P I +LTWPG+
Sbjct: 9 EHPSVTLFRQYLRICTVQPNPDYGSAVTFLEERARQLGLSCQKIEVAPGYVITVLTWPGT 68
Query: 88 DPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRN 147
+P L SIL NSH D VP + W H PF AF E G I+ARG+QD K ++IQY+EA+R
Sbjct: 69 NPLLHSILLNSHTDVVPVFKEHWHHDPFEAFKDSE-GYIYARGAQDMKSVSIQYLEAVRR 127
Query: 148 LILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRV 207
L + P RT+H ++VPDEE+GG GM FV+ EF+ L GF +DEG A+ D F V
Sbjct: 128 LKSEGHRFP-RTIHMTFVPDEEVGGHKGMELFVKRPEFQALRAGFALDEGLANPTDAFTV 186
Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG-RAANS 266
FY++RSPW + + + G PGH SR ++ A E L K V I FRE + ++A
Sbjct: 187 FYSERSPWWIRVTSTGKPGHASRFIEDTAAEKLHKVVNSILAFREKERQRLQANPHLKEG 246
Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
V SVNL L+ G+ N+ P+ A FD R+ P VD +++ A
Sbjct: 247 AVTSVNLTKLEGGV------AYNVVPATMSACFDFRVAPDVDMKAFEKQLQSWCQEAGEG 300
Query: 327 MSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMR 386
+++E +K P MT TDD++PWW+ F A L +PEI + TD+RY+R
Sbjct: 301 VTFEFAQKF------TEPRMTPTDDTDPWWAAFSGACKEMNLTL-EPEIFPAATDSRYIR 353
Query: 387 QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433
+GIP LGFSPM TP+LLHDHNE L + VFL+GV++Y ++++L+S
Sbjct: 354 AVGIPALGFSPMNRTPVLLHDHNERLHEAVFLRGVDIYTRLVAALAS 400
>sp|Q55DP8|ACY1_DICDI Aminoacylase-1 OS=Dictyostelium discoideum GN=acy1 PE=2 SV=1
Length = 408
Score = 324 bits (830), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 172/414 (41%), Positives = 251/414 (60%), Gaps = 19/414 (4%)
Query: 25 SHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTW 84
S +E E +T F+++L+ T HP P+Y + FL+ +A+ + ++ PI+L+
Sbjct: 3 SIQENEHVTVFREFLKIRTDHPTPDYESSTKFLVEKAKEYNIPYEVYR-ETGTPIVLMKI 61
Query: 85 PGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEA 144
G +P+L ++L NSH+D VPA D W PFSA+ E+G IF RG+QD KC+ +Q++E
Sbjct: 62 EGLEPNLKTVLLNSHVDVVPAVHDSWKVDPFSAWKD-ESGNIFGRGTQDMKCVCMQFLEV 120
Query: 145 IRNLILVKNFKPIRTVHASYVPDEEIGGF-DGMAKFVESNEFRELNVGFVMDEGQASTND 203
R ++ K RT+H S+VPDEEIGG GM KFV + +FR+LN+G +DEG AS +
Sbjct: 121 ARRIVQSGQ-KLKRTLHLSFVPDEEIGGSGKGMEKFVYTEKFRQLNIGLCLDEGLASPTN 179
Query: 204 DFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRA 263
DF VFY +R+PW + I A G GHGSR + A+E LM+++ + FR+ QF+ + G+
Sbjct: 180 DFTVFYGERAPWWVHITAVGNAGHGSRFIEGTAIEKLMRTINKMLAFRQEQFESLHHGQH 239
Query: 264 AN----SEVISVNLVYLKAGIP--SPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIA 317
+V S+NL LKAGIP F N+ P++AEAGFD R+PPTV+ D +I
Sbjct: 240 ECGKKLGDVTSLNLTVLKAGIPIDHSNNFSYNVIPTQAEAGFDIRIPPTVNLDQFLDQI- 298
Query: 318 EEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILA 377
+EW A +S++ P + MT D N WW FK + L EI
Sbjct: 299 KEWT-AEEGLSFKFASYIPKNE------MTKLDSDNKWWENFKESCKKMDINL-VTEIFP 350
Query: 378 STTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
+ TD+R++R LGIP GFSP+ NTPILLHDHNEFL + V+L+G++++ +I +L
Sbjct: 351 AATDSRFIRNLGIPAFGFSPINNTPILLHDHNEFLNEKVYLRGIDIFMGIIPNL 404
>sp|P27614|CBPS_YEAST Carboxypeptidase S OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=CPS1 PE=1 SV=2
Length = 576
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 80 LLLTWPGSDPSLPSILFNSHLDSVPAEPD---KWSHPPFSAFHSPETGQIFARGSQDDKC 136
LL TW GSDP L +L +H D VP + W PPFS + PET ++ RGS D K
Sbjct: 149 LLYTWEGSDPDLKPLLLMAHQDVVPVNNETLSSWKFPPFSGHYDPETDFVWGRGSNDCKN 208
Query: 137 IAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGF--VM 194
+ I EAI L L+ FKP RT+ S DEE G G A R + G ++
Sbjct: 209 LLIAEFEAIEQL-LIDGFKPNRTIVMSLGFDEEASGTLGAASLASFLHERYGDDGIYSII 267
Query: 195 DEGQASTNDDFRVFY-----ADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITK 249
DEG+ D VF A++ + G GH S D+ + + E+IT+
Sbjct: 268 DEGEGIMEVDKDVFVATPINAEKGYVDFEVSILGHGGHSSVPPDHTT---IGIASELITE 324
Query: 250 FRESQFD 256
F + FD
Sbjct: 325 FEANPFD 331
>sp|Q08BT9|P20D1_XENTR Probable carboxypeptidase PM20D1 OS=Xenopus tropicalis GN=pm20d1
PE=2 SV=1
Length = 512
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 145/364 (39%), Gaps = 72/364 (19%)
Query: 86 GSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAI 145
GSD +L + +H+D VPA P+ W PPFS G I+ RG+ DDK I ++++
Sbjct: 121 GSDHNLLPYMLLAHIDVVPAPPESWEVPPFSG--EERDGYIYGRGTLDDKNCVIGILQSL 178
Query: 146 RNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDF 205
+L + KP R+ + DEEI G G K VE + + + + FV+DEG A +
Sbjct: 179 E-FLLKRGHKPRRSFYIGLGHDEEISGHKGAQKIVEKLQSQGVKLAFVLDEGLAVLDGVI 237
Query: 206 R--------VFYADRSPWHLIIRAKGAPGHGS------------------------RMFD 233
+ V ++ L + PGH S MF
Sbjct: 238 QGISQPVALVGTTEKGSVTLDLTVNRLPGHSSMPPSETSIGILAAAVSRLEQNMMPNMFG 297
Query: 234 NGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVIS----------------VNLVYLK 277
NG +++ + + TKF + +++ A S ++S L K
Sbjct: 298 NGPEQDMFEHLS--TKF-DFPLNIIMANLWLFSPILSRILELSPSTNAIVRTTTALTIFK 354
Query: 278 AGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN-MSYEIIEKGP 336
AGI S N+ P A A + RL P + +E ++N + E +E
Sbjct: 355 AGIKS------NVIPPTATATVNFRLHPA--------QTVQEVLDIVQNTIKDERVELSV 400
Query: 337 IRDYKGRPLMTLTDDSNPWWSVFKRAVTSA-GGKLGKPEILASTTDARYMRQLGIPVLGF 395
+ + PL +D + + + +R + G P + TD+R+ L + F
Sbjct: 401 LNSFD--PLPVSPNDMSLGYHILQRTIHDVFSGPPVAPGVCVGNTDSRHFVNLTNSIYRF 458
Query: 396 SPMA 399
SP+
Sbjct: 459 SPVV 462
>sp|Q55FR8|CBPS2_DICDI Probable carboxypeptidase S-like 2 OS=Dictyostelium discoideum
GN=DDB_G0267984 PE=3 SV=1
Length = 519
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 9/122 (7%)
Query: 80 LLLTWPGSDPSLPSILFNSHLDSVPAE-PDKWSHPPFSAFHSPETGQIFARGSQDDKCIA 138
L+ W G D SL IL H+D VP DKW+HPPFS H +T I+ RG+ DDK
Sbjct: 132 LVYNWKGLDESLKPILLAGHIDVVPTLFLDKWTHPPFSG-HIDDT-YIWGRGTMDDKGSV 189
Query: 139 IQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDG---MAKFVESNEFRELNVGFVMD 195
+ +E++ +L L + FKP R+++ ++ DEE+GG +G + K+ ++NE F++D
Sbjct: 190 MAILESVEDL-LSQGFKPQRSIYFAFGHDEELGGNNGAFNINKYFDTNEIGPFE--FILD 246
Query: 196 EG 197
EG
Sbjct: 247 EG 248
>sp|Q5ZL18|P20D1_CHICK Probable carboxypeptidase PM20D1 OS=Gallus gallus GN=PM20D1 PE=2
SV=1
Length = 517
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 81 LLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQ 140
L T GSD + + +H+D VPA P+ W PPFSA + G I+ RG+ D+K AI
Sbjct: 119 LFTVQGSDSEMMPYMLLAHMDVVPAPPEGWDFPPFSA--AEHEGFIYGRGTLDNKNSAIG 176
Query: 141 YIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 199
++A+ +L +N++P R+ + DEE+ G G K E R + + F++DEG A
Sbjct: 177 ILQAL-EFLLRRNYRPRRSFYVGIGHDEEVFGQKGALKIAALLESRGVKLSFLLDEGSA 234
>sp|Q55DL1|CBPS1_DICDI Probable carboxypeptidase S-like 1 OS=Dictyostelium discoideum
GN=DDB_G0270582 PE=3 SV=1
Length = 485
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 74 VPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQD 133
V NK LL W GSD +L +L NSH D VP +W+ P+ + I+ RGS D
Sbjct: 86 VINKYSLLFEWTGSDKTLKPLLLNSHYDVVPVTESEWTFNPWGEIRN---DNIYGRGSID 142
Query: 134 DKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRE--LNVG 191
+K I + +E+I ++ +PIRT++ + DEE+GG +G + FRE +
Sbjct: 143 NKVIVMATMESIEAILANNYTQPIRTIYLCFGHDEELGGLNGHRMI--ARHFRENLVRAE 200
Query: 192 FVMDEG 197
+ DEG
Sbjct: 201 AIFDEG 206
>sp|Q2T9M7|P20D1_BOVIN Probable carboxypeptidase PM20D1 OS=Bos taurus GN=PM20D1 PE=2 SV=1
Length = 503
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 81 LLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQ 140
L T GSDPS+ + +H+D VPA W PPFS G I+ RG+ D+K +
Sbjct: 107 LFTIKGSDPSMQPYILLAHIDVVPAPDKGWDVPPFSGLE--RDGFIYGRGTLDNKNYLMA 164
Query: 141 YIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEG 197
++A+ L+L++N+ P R+ + DEEI G +G K + R + + FV+DEG
Sbjct: 165 ILQALE-LLLIRNYIPRRSFFIALGHDEEISGINGAQKISALLQARGVQLAFVVDEG 220
>sp|Q8C165|P20D1_MOUSE Probable carboxypeptidase PM20D1 OS=Mus musculus GN=Pm20d1 PE=2
SV=1
Length = 503
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 81 LLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQ 140
L T GSDPSL + +H+D VPA + W PPFS G I+ RG+ D+K +
Sbjct: 107 LFTIQGSDPSLQPYMLMAHIDVVPAPEEGWEVPPFSGLE--RNGFIYGRGALDNKNSVMA 164
Query: 141 YIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEG 197
+ A+ L+L++N+ P R+ + DEE+ G G K + R + + F++DEG
Sbjct: 165 ILHALE-LLLIRNYSPKRSFFIALGHDEEVSGEKGAQKISALLQARGVQLAFLVDEG 220
>sp|O13968|YE48_SCHPO Uncharacterized carboxypeptidase C24C9.08 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC24C9.08 PE=3 SV=1
Length = 596
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 15/173 (8%)
Query: 68 FKTL--EFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP---AEPDKWSHPPFSAFHSPE 122
FK L E+V N LL+T GS+ L ++ H D VP A D+W PPFSA +
Sbjct: 165 FKKLKVEYV-NTYGLLITLEGSNKDLKPLVLMGHQDVVPVNQASLDRWYFPPFSATY--H 221
Query: 123 TGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVES 182
G +++RG+ DDK + +EA+ ++ + ++KP +TV AS+ DEE+ G+ G
Sbjct: 222 NGHVYSRGAADDKNSVVAILEALE-ILAISDYKPEQTVIASFGFDEEVSGYRGALPLAHK 280
Query: 183 --NEFRELNVGFVMDEGQASTNDDFRVF----YADRSPWHLIIRAKGAPGHGS 229
+ + V ++DEG + N +F A++ + ++ K GH S
Sbjct: 281 LYERYGKDGVALILDEGGFTINLFGTLFATVCVAEKGYMDVHLKLKTPGGHAS 333
>sp|P0C155|CBPS2_YEAST Putative carboxypeptidase YOL153C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOL153C PE=5 SV=1
Length = 581
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 76 NKPILLLTWPGSDPSLPSILFNSHLDSVPAEP---DKWSHPPFSAFHSPETGQIFARGSQ 132
N+ LL TW G+DPSL ILF +H D VP D W +PP S + ET ++ RGS
Sbjct: 147 NQLGLLYTWEGTDPSLKPILFMAHQDVVPVNREIWDSWQYPPLSGHYDQETDYVWGRGSN 206
Query: 133 DDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDG 175
D K + + +E I L L ++ RTV S DEE GF G
Sbjct: 207 DCKNLMLAELEGIEQL-LADGYQTERTVILSLGFDEESSGFMG 248
>sp|A5UFQ7|DAPE_HAEIG Succinyl-diaminopimelate desuccinylase OS=Haemophilus influenzae
(strain PittGG) GN=dapE PE=3 SV=1
Length = 377
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 166/412 (40%), Gaps = 48/412 (11%)
Query: 29 REPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSD 88
RE + Q L + + +PN + + + +G Q +E++P L L W
Sbjct: 2 REKVVSLAQDL-IHRSSISPNDEGCQKIIAERLEKLGFQ---IEWMPFNDTLNL-WAKHG 56
Query: 89 PSLPSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRN 147
S P I F H D VP + ++WS PPFSA G ++ RG+ D K I A
Sbjct: 57 TSEPVIAFAGHTDVVPTGDENQWSSPPFSA--EIIDGMLYGRGAADMKGSLAAMIVAAEE 114
Query: 148 LILVK-NFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVM-DEGQASTNDDF 205
+ N K I + DEE DG + VE+ R+ + + M E ++ N
Sbjct: 115 YVKANPNHKGI--IALLITSDEEAAAKDGTIRVVETLMTRDEKITYCMVGEPSSAKNLGD 172
Query: 206 RVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAAN 265
V R + +G GH + + + A + K+ + + Q+D
Sbjct: 173 VVKNGRRGSITGNLYIQGIQGHVA--YPHLAENPIHKAALFLQELTTYQWD-------KG 223
Query: 266 SEVI---SVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAP 322
+E S+ + + AG S N+ P+E F+ R V ++I++++AE
Sbjct: 224 NEFFPPTSLQIANIHAGTGSN-----NVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK 278
Query: 323 AIRNMSYEI---IEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAST 379
N+ Y I + P G+ L ++T A+ G K E T
Sbjct: 279 --HNLKYRIEWNLSGNPFLTKPGKLLDSITS-----------AIEETIGITPKAETGGGT 325
Query: 380 TDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
+D R++ +G V+ F P+ +T +H NE + K E+Y ++ +L
Sbjct: 326 SDGRFIALMGAEVVEFGPLNST---IHKVNECVSVEDLGKCGEIYHKMLVNL 374
>sp|Q4QP83|DAPE_HAEI8 Succinyl-diaminopimelate desuccinylase OS=Haemophilus influenzae
(strain 86-028NP) GN=dapE PE=3 SV=1
Length = 377
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 164/409 (40%), Gaps = 42/409 (10%)
Query: 29 REPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSD 88
RE + Q L +PN + + + +G Q +E++P L L W
Sbjct: 2 REKVVSLAQDL-IRRPSISPNDEGCQQIIAERLEKLGFQ---IEWMPFNDTLNL-WAKHG 56
Query: 89 PSLPSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFARGSQDDK-CIAIQYIEAIR 146
S P I F H D VP + ++WS PPFSA G ++ RG+ D K +A + A
Sbjct: 57 TSEPVIAFAGHTDVVPTGDENQWSSPPFSA--EIIDGMLYGRGAADMKGSLAAMIVAAEE 114
Query: 147 NLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVM-DEGQASTNDDF 205
+ N K T+ DEE DG + VE+ R+ + + M E ++ N
Sbjct: 115 YVKANPNHKG--TIALLITSDEEAAAKDGTIRVVETLMARDEKITYCMVGEPSSAKNLGD 172
Query: 206 RVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAAN 265
V R + KG GH + + + A + K+ + + Q+D
Sbjct: 173 VVKNGRRGSITGNLYIKGIQGHVA--YPHLAENPIHKAAPFLQELTTYQWD-------KG 223
Query: 266 SEVI---SVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAP 322
+E S+ + + AG S N+ P+E F+ R V ++I++++AE
Sbjct: 224 NEFFPPTSLQIANIHAGTGSN-----NVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK 278
Query: 323 AIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDA 382
N+ Y I + G+P +T A+ G K E T+D
Sbjct: 279 --HNLKYRIE-----WNLSGKPFLT---KPGKLLDSITSAIEETIGITPKAETGGGTSDG 328
Query: 383 RYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
R++ +G V+ F P+ +T +H NE + K E+Y ++ +L
Sbjct: 329 RFIALMGAEVVEFGPLNST---IHKVNECVSIEDLGKCGEIYHKMLVNL 374
>sp|Q08BB2|P2012_DANRE Probable carboxypeptidase PM20D1.2 OS=Danio rerio GN=pm20d1.2 PE=2
SV=1
Length = 522
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 81 LLTWPGSDPSLPSILFNSHLDSVPA-EPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAI 139
L T G+D L + +H+D VPA E D W PPFSA G I+ RG+ D+K +
Sbjct: 124 LFTIAGTDADLEPYMLLAHIDVVPANEADGWDAPPFSA--QEINGFIYGRGTIDNKQSVM 181
Query: 140 QYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 199
++A+ L L K + P RT + DEE+ G G V+ + R + + +V+DEG A
Sbjct: 182 GILQALEYL-LEKGYTPRRTFYIGLGHDEEVNGLHGAVNIVKLLKSRGVKLLYVLDEGLA 240
>sp|A5UB44|DAPE_HAEIE Succinyl-diaminopimelate desuccinylase OS=Haemophilus influenzae
(strain PittEE) GN=dapE PE=3 SV=1
Length = 377
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 159/391 (40%), Gaps = 41/391 (10%)
Query: 47 NPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP-A 105
+PN + + +G Q +E++P L L W S P I F H D VP
Sbjct: 19 SPNDEGCQQIIAEGLEKLGFQ---IEWMPFNDTLNL-WAKHGTSEPVIAFVGHTDVVPTG 74
Query: 106 EPDKWSHPPFSAFHSPETGQIFARGSQDDK-CIAIQYIEAIRNLILVKNFKPIRTVHASY 164
+ ++WS PPFSA G ++ RG+ D K +A + A + N K T+
Sbjct: 75 DENQWSSPPFSA--EIIDGILYGRGAADMKGSLAAMIVAAEEYVKANPNHK--GTIALLI 130
Query: 165 VPDEEIGGFDGMAKFVESNEFRELNVGFVM-DEGQASTNDDFRVFYADRSPWHLIIRAKG 223
DEE DG + VE+ R+ + + M E ++ N V R + +G
Sbjct: 131 TSDEEAAAKDGTIRVVETLMTRDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG 190
Query: 224 APGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVI---SVNLVYLKAGI 280
GH + + + A + K+ + + Q+D +E S+ + + AG
Sbjct: 191 IQGHVA--YPHLAENPIHKAAPFLQELTTYQWD-------KGNEFFPPTSLQIANIHAGT 241
Query: 281 PSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDY 340
S N+ P+E F+ R V ++I++++AE A N+ Y I +
Sbjct: 242 GSN-----NVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLAK--HNLKYRIE-----WNL 289
Query: 341 KGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMAN 400
G+P +T A+ G K E T+D R++ +G V+ F P+ +
Sbjct: 290 SGKPFLT---KPGKLLDSITSAIEEITGITPKAETGGGTSDGRFIALMGAEVVEFGPLNS 346
Query: 401 TPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
+ +H NE + K E+Y ++ +L
Sbjct: 347 S---IHKVNECVSVEDLGKCGEIYHKMLVNL 374
>sp|P44514|DAPE_HAEIN Succinyl-diaminopimelate desuccinylase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=dapE PE=1
SV=1
Length = 377
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 158/391 (40%), Gaps = 41/391 (10%)
Query: 47 NPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP-A 105
+PN + + + +G Q +E++P L L W S P I F H D VP
Sbjct: 19 SPNDEGCQQIIAERLEKLGFQ---IEWMPFNDTLNL-WAKHGTSEPVIAFAGHTDVVPTG 74
Query: 106 EPDKWSHPPFSAFHSPETGQIFARGSQDDK-CIAIQYIEAIRNLILVKNFKPIRTVHASY 164
+ ++WS PPFSA G ++ RG+ D K +A + A + N K T+
Sbjct: 75 DENQWSSPPFSA--EIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKG--TIALLI 130
Query: 165 VPDEEIGGFDGMAKFVESNEFRELNVGFVM-DEGQASTNDDFRVFYADRSPWHLIIRAKG 223
DEE DG VE+ R+ + + M E ++ N V R + +G
Sbjct: 131 TSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG 190
Query: 224 APGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVI---SVNLVYLKAGI 280
GH + + + A + K+ + + Q+D +E S+ + + AG
Sbjct: 191 IQGHVA--YPHLAENPIHKAALFLQELTTYQWD-------KGNEFFPPTSLQIANIHAGT 241
Query: 281 PSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDY 340
S N+ P+E F+ R V ++I++++AE N+ Y I +
Sbjct: 242 GSN-----NVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK--HNLKYRIE-----WNL 289
Query: 341 KGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMAN 400
G+P +T A+ G K E T+D R++ +G V+ F P+ +
Sbjct: 290 SGKPFLT---KPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNS 346
Query: 401 TPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
T +H NE + K E+Y ++ +L
Sbjct: 347 T---IHKVNECVSVEDLGKCGEIYHKMLVNL 374
>sp|Q32LT9|P2011_DANRE Probable carboxypeptidase PM20D1.1 OS=Danio rerio GN=pm20d1.1 PE=2
SV=1
Length = 515
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 81 LLTWPGSDPSLPSILFNSHLDSVPA-EPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAI 139
L T G+D L + +H+D VPA E W PPFSA G I+ RG+ D+K +
Sbjct: 122 LFTVVGADAGLEPYMLLAHIDVVPANEAGGWDAPPFSA--QEIDGFIYGRGTIDNKQSVM 179
Query: 140 QYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEG 197
++A+ L L + + P RT + DEEI G +G K V + R + + +V+DEG
Sbjct: 180 GILQALEYL-LERGYTPRRTFYIGLGHDEEINGEEGAVKIVNLLKSRGVKLLYVLDEG 236
>sp|Q3IL20|DAPE_PSEHT Succinyl-diaminopimelate desuccinylase OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=dapE PE=3 SV=1
Length = 376
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 144/373 (38%), Gaps = 35/373 (9%)
Query: 62 QSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDK-WSHPPFSAFHS 120
Q++G ++L F L TW P F H D VP P+K W +PPFS
Sbjct: 34 QAVGFNIESLFFTDT----LNTWARKGTQSPHFCFAGHTDVVPTGPEKNWQYPPFSGL-- 87
Query: 121 PETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFV 180
E G + RG+ D K + A + K+ ++ DEE +G + +
Sbjct: 88 VENGLLHGRGAADMKGSLAAMLVATERFV-TKHPDHKGSISFLITSDEEGPFINGTTRVI 146
Query: 181 ESNEFRELNVGFVMDEGQASTNDDFR--VFYADRSPWHLIIRAKGAPGHGSRMFDNGAME 238
++ E R + + G+ S+ D V R + KG GH + + A
Sbjct: 147 DTLEARGEKIDMCL-VGEPSSRDVLGDVVKNGRRGSLTGFLTVKGIQGHVA--YPQLAQN 203
Query: 239 NLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAG 298
+ + +T+ ++ +D A S IS I TG N+ P E E
Sbjct: 204 PIHLTTPALTELSQTVWDHGNEYFPATSFQIS--------NINGGTG-AGNVIPGELEVQ 254
Query: 299 FDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSV 358
F+ R V +++R+ N++YE+ G+P +T + P
Sbjct: 255 FNFRFSTEVTHTQLQQRVNAILQQ--HNLNYELSWI-----VNGQPFLT---EHGPLVDA 304
Query: 359 FKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFL 418
+A+ S G E T+D R++ Q G V+ P T +H +E + +
Sbjct: 305 TVKAIKSVTGLTTNLETTGGTSDGRFIAQTGAKVIELGPRNAT---IHKVDECVSTDDLI 361
Query: 419 KGVEVYESVISSL 431
++YE ++ +L
Sbjct: 362 ALCDIYEQILENL 374
>sp|Q9CM22|DAPE_PASMU Succinyl-diaminopimelate desuccinylase OS=Pasteurella multocida
(strain Pm70) GN=dapE PE=3 SV=1
Length = 378
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 157/391 (40%), Gaps = 41/391 (10%)
Query: 47 NPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP-A 105
+P+ + + + +G Q +E++P L L W P I F H D VP
Sbjct: 19 SPDDQGCQQIIAERLERLGFQ---IEWLPFNDTLNL-WAKHGSGSPVIAFAGHTDVVPVG 74
Query: 106 EPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYV 165
+ +W +PPFSA ++ RG+ D K + A + + N + TV
Sbjct: 75 DTTQWQYPPFSAQLVDNV--LYGRGAADMKGSLAAMVVAAEHYVKA-NPEHSGTVALLIT 131
Query: 166 PDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFR--VFYADRSPWHLIIRAKG 223
DEE DG + VE+ R + + + G+ S+ F V R + +G
Sbjct: 132 SDEEAAAKDGTVRVVETLMARGEPIDYCI-VGEPSSAQQFGDIVKNGRRGSITANLYIQG 190
Query: 224 APGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEV--ISVNLVYLKAGIP 281
GH + + + A + K++ +T+ Q+D N S+ + ++AG
Sbjct: 191 IQGHVA--YPHLAQNPVHKALGFLTELTTYQWD------NGNDFFPPTSLQIANIQAGTG 242
Query: 282 SPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKG-PIRDY 340
S N+ P E F+ R V D+I++++AE A N E G P
Sbjct: 243 SN-----NVIPGELYVQFNLRYCTEVTDDIIKKKVAEMLAKHQLNYRIEWHLSGKPFLTA 297
Query: 341 KGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMAN 400
KG+ + TL D R GG T+DAR++ +G V+ F P+
Sbjct: 298 KGKLVDTLLDVVEKITQ--NRPHLDTGG---------GTSDARFIALMGAEVVEFGPLNK 346
Query: 401 TPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
T +H +E + K EVY+ V+ ++
Sbjct: 347 T---IHKVDECVNVDDLAKCGEVYQHVLCNM 374
>sp|Q6GTS8|P20D1_HUMAN Probable carboxypeptidase PM20D1 OS=Homo sapiens GN=PM20D1 PE=2
SV=3
Length = 502
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 81 LLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQ 140
L T GSDPSL L +H D VPA + W PPFS G I+ RG+ DDK ++
Sbjct: 107 LFTIQGSDPSLQPYLLMAHFDVVPAPEEGWEVPPFSGLE--RDGIIYGRGTLDDKN-SVM 163
Query: 141 YIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQAS 200
+ L+L++ + P R+ S DEE G G + + R + + F++DEG
Sbjct: 164 ALLQALELLLIRKYIPRRSFFISLGHDEESSG-TGAQRISALLQSRGVQLAFIVDEGGFI 222
Query: 201 TND---DFR-----VFYADRSPWHLIIRAKGAPGHGS 229
+D +F+ + +++ +L+++ GH S
Sbjct: 223 LDDFIPNFKKPIALIAVSEKGSMNLMLQVNMTSGHSS 259
>sp|A1U3R0|DAPE_MARAV Succinyl-diaminopimelate desuccinylase OS=Marinobacter aquaeolei
(strain ATCC 700491 / DSM 11845 / VT8) GN=dapE PE=3 SV=1
Length = 376
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 154/393 (39%), Gaps = 48/393 (12%)
Query: 48 PNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEP 107
P+ ++S+ +G + L F + W + P + F H D VP P
Sbjct: 21 PDDAGCQELMMSRLAPLGFSGENLRFGETDNL----WARKGNNGPVLAFAGHTDVVPTGP 76
Query: 108 DK-WSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIR-TVHASYV 165
+K W+HPPF + G + RG+ D K +I A V N R ++
Sbjct: 77 EKNWAHPPFDPI--IKDGYLHGRGAADMKGSLAAFITACER--FVANHPNHRGSIALLIT 132
Query: 166 PDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFY-ADRSPWHLIIRAKGA 224
DEE DG K VE+ E R + + + +ST+ V R H + +G
Sbjct: 133 SDEEGPAQDGTVKVVETLEARNEKMDWCLIGEPSSTHQVGDVIKNGRRGSLHGYLTVRGV 192
Query: 225 PGHGS--RMFDNGAMENLMKSVEMITK-FRESQFDVVKAGRAANSEVISVNLVYLKAGIP 281
GH + + +N A+ N+ +++ + K F ++ D + + ++AG+
Sbjct: 193 QGHVAYPHLAEN-AVHNVAPALDALAKEFWDNGNDFFPP--------TTFQITRVEAGVG 243
Query: 282 SPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAI---RNMSYEIIEKGPIR 338
S N+ P E F+ R + + R+ AI N+ Y++
Sbjct: 244 S------NIVPGECLVHFNFRYCTENTAESLEERVV-----AILDRHNLKYDLQWH---- 288
Query: 339 DYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPM 398
GRP +T D S + A+ + G+ + T+D R++ G V+ P+
Sbjct: 289 -LSGRPFLT---DKGALVSAAQNAIRTVTGRETELSTSGGTSDGRFIAPTGAQVVELGPI 344
Query: 399 ANTPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
T +H +E +K E+YE ++ L
Sbjct: 345 NAT---IHKVDECVKAEDLDTLSEIYEQILVEL 374
>sp|Q7VNB3|DAPE_HAEDU Succinyl-diaminopimelate desuccinylase OS=Haemophilus ducreyi
(strain 35000HP / ATCC 700724) GN=dapE PE=3 SV=1
Length = 376
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 142/368 (38%), Gaps = 38/368 (10%)
Query: 70 TLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFA 128
TLE++P L L W P I+F H D VP +P +W +PPFSA E +
Sbjct: 39 TLEWMPFGDTLNL-WATHGNGDPCIVFAGHTDIVPTGDPAQWQYPPFSAIIVDE--MLHG 95
Query: 129 RGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFREL 188
RG+ D K + A N + K + DEE DG AK VE+ R
Sbjct: 96 RGAADMKGSLAALVIAAENFVR-KYPNHSGKIALLITSDEEATAKDGTAKVVETLMARHE 154
Query: 189 NVGF-VMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMI 247
+ + V+ E S + R + +G GH + + + A + S+ +
Sbjct: 155 KIDYAVIGEPSCSKYLGDIIKNGRRGSITAELYIEGVQGHVA--YPHLAQNPIHTSLAFL 212
Query: 248 TKFRESQFDVVKAGRAANSEVI----SVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARL 303
+ Q+D N S+ + +KAG + N+ P E F+ R
Sbjct: 213 NELTTYQWD--------NGNTFFPPTSLQIANIKAGTGNN-----NVIPGELYLQFNLRY 259
Query: 304 PPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAV 363
++ +I++ +A A + Y I G+P ++ + +AV
Sbjct: 260 CTEINDQIIKQTVATMLAK--YGLQYRI-----HWHLSGKPFLS---SEGKLVNATIQAV 309
Query: 364 TSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEV 423
+ + + T+D R++ +G V+ F P+ T +H NE + K ++
Sbjct: 310 ENITKHTPRLDTSGGTSDGRFIALMGAEVVEFGPLNAT---IHKVNECVSTEDLAKCGQI 366
Query: 424 YESVISSL 431
Y ++ L
Sbjct: 367 YYQILEQL 374
>sp|A1WX26|DAPE_HALHL Succinyl-diaminopimelate desuccinylase OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=dapE PE=3 SV=1
Length = 378
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 125/340 (36%), Gaps = 47/340 (13%)
Query: 84 WPGSDPSLPSILFNSHLDSVPAEPDK-WSHPPFSAFHSPETGQIFARGSQDDKCIAIQYI 142
W P F H D VP+ P+ W HPPF E G ++ RG+ D K ++
Sbjct: 51 WAQRGTERPLFCFLGHTDVVPSGPESAWQHPPFQPI--VENGCLYGRGAADMKGSVAAFV 108
Query: 143 EAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVM---DEGQA 199
A+ + ++ + DEE DG + VE+ R + + + QA
Sbjct: 109 AAVERFV-ARHPDHAGAIAVLLTSDEEGPAVDGTRRVVETLAARGAAIDYCLVGEPSSQA 167
Query: 200 STNDDFRVFYADRSPWHLIIRAKGAPGHGS--RMFDNGAMENLMKSVEMITKFRESQFDV 257
D+++V HL + G GH + DN + +++ + Q D
Sbjct: 168 RLGDEYKVGRRGSLTGHLTVH--GEQGHVAYPHQADN-PIHAFAPALQELVATEWDQGD- 223
Query: 258 VKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIA 317
A+ S + ++AG + N+ P E F+ R P V + ++ RI
Sbjct: 224 ------ADFPPTSFQISNIQAGTGAD-----NVIPGAMEVVFNLRYAPAVSAEELQERI- 271
Query: 318 EEWAPAIRNMSYEIIEKGPIRD-----YKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGK 372
I+ + + + G P T ++AVT+ G+ +
Sbjct: 272 -----------ESILHRHGVHHTLHWRHSGAPFAT---REGALIDAVEQAVTAHTGQCPR 317
Query: 373 PEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFL 412
T+D R+M G V+ P+ T +H NE +
Sbjct: 318 RSTSGGTSDGRFMGPTGAQVVELGPLNAT---IHKANEHV 354
>sp|Q98D57|DAPE_RHILO Succinyl-diaminopimelate desuccinylase OS=Rhizobium loti (strain
MAFF303099) GN=dapE PE=3 SV=1
Length = 397
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 130/321 (40%), Gaps = 32/321 (9%)
Query: 92 PSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLIL 150
P ++F H D VP + W+HPPF+A G+++ RG+ D K ++ AI +
Sbjct: 67 PHLMFAGHTDVVPVGDEAAWTHPPFAA--EIANGEMYGRGAVDMKGGIACFVAAIARHV- 123
Query: 151 VKNFKPIRTVHASYVPDEEIGGFDGMAKFVE--SNEFRELNVGFVMDEGQASTNDDFRVF 208
N P +V DEE +G K +E ++ + + V + T D +
Sbjct: 124 ENNGGPKGSVSLLITGDEEGPAINGTVKLLEWAASRGEKWDASIVGEPTNPDTLGDM-IK 182
Query: 209 YADRSPWHLIIRAKGAPGHGS--RMFDNGAMENLMKSVEMITK--FRESQFDVVKAGRAA 264
R I G GH + ++ DN + LM V+ + F + D +
Sbjct: 183 IGRRGSLSGSITVNGRQGHAAYPQLADN-PVRGLMGLVDALLHPVFDKGTKDF----QPT 237
Query: 265 NSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAI 324
N EV S+++ G P+ N+ P++A A F+ R T + ++ I A
Sbjct: 238 NLEVTSIDV-----GNPA-----TNVIPAKATATFNIRFNDTWTAETVQAEIHNRLDQAA 287
Query: 325 RNMSYEIIEKGPIRDY----KGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTT 380
+ Y +K P+ DY + RP + ++ +A GK T+
Sbjct: 288 KRKKYRPGKKTPV-DYDLVWRDRPSHVFLTRDDKLVDTLAGSIKAAVGKEPTLSTSGGTS 346
Query: 381 DARYMRQLGIPVLGFSPMANT 401
DAR+++ PV+ F + T
Sbjct: 347 DARFIKDY-CPVVEFGLVGKT 366
>sp|Q31G37|DAPE_THICR Succinyl-diaminopimelate desuccinylase OS=Thiomicrospira crunogena
(strain XCL-2) GN=dapE PE=3 SV=1
Length = 378
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 144/356 (40%), Gaps = 39/356 (10%)
Query: 84 WPGSDPSLPSILFNSHLDSVPAEP-DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYI 142
W + P I+F H D VP P +KW+HPPFSA H G ++ RG+ D K ++
Sbjct: 51 WARAGKDGPVIVFAGHTDVVPTGPEEKWTHPPFSA-HIDADGIMYGRGTADMKSSIACFM 109
Query: 143 EAIRNLILVKNFKPIRTVHASYV-PDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQAST 201
A + I K + + A + DEE +G K +E+ E R + + +S+
Sbjct: 110 VATKQFI--KQYPDFKGSIAFLITSDEEGPAVNGTVKVIEALEARNEKFEYCLVGEPSSS 167
Query: 202 N---DDFRVFYADRSPWHLIIRAKGAPGHGS--RMFDNGAMENLMKSV-EMITKFRESQF 255
N D + HL I KG GH + ++ +N + L ++ +M+ K +
Sbjct: 168 NTLGDSIKNGRRGSLSGHLTI--KGIQGHIAYPQLAEN-PIHTLSPALSDMVNKVWDKGN 224
Query: 256 DVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRR 315
D + + I S TG N+ P + F+ R P+ ++
Sbjct: 225 DYFPPTS------------FQVSNIHSGTG-ATNVIPGDCVVDFNFRFSTEQTPESLKAG 271
Query: 316 IAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEI 375
I + ++Y++ + G P +T D +A+ G +
Sbjct: 272 IHQILDS--HQLNYDL-----DWNLSGLPFITPAD--GELIQAVSKAIEQEMGTTPELST 322
Query: 376 LASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
T+D R++ Q G V+ P+ +T +H +E + + K ++Y + + +L
Sbjct: 323 GGGTSDGRFIAQTGAQVIELGPLNDT---IHKIDERVSVSDLEKLTQIYRNTLINL 375
>sp|Q2SBP0|DAPE_HAHCH Succinyl-diaminopimelate desuccinylase OS=Hahella chejuensis
(strain KCTC 2396) GN=dapE PE=3 SV=1
Length = 383
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 146/390 (37%), Gaps = 39/390 (10%)
Query: 47 NPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAE 106
P+ L + Q+IG + L F + W P ++F H D VP
Sbjct: 22 TPHDAGCQELLSQRLQTIGFEITDLPFGEVQNF----WARRGSQAPLVVFAGHTDVVPTG 77
Query: 107 PD-KWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYV 165
P+ KW HPPF+A + G + RG+ D K ++ A + K+ ++
Sbjct: 78 PEEKWEHPPFAA--EVKDGVLHGRGAADMKGSLAAFMTACERFVK-KHPNHRGSIGWLIT 134
Query: 166 PDEEIGGFDGMAKFVE--SNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKG 223
DEE +G K VE ++ ++ V + T D + R + KG
Sbjct: 135 SDEEGHAVNGTVKVVEYLVDKGEVIDWCIVGEPSSTHTVGDV-IKNGRRGSIGATLIVKG 193
Query: 224 APGHGS--RMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIP 281
GH + + DN + K+ + + ++D A A S IS I
Sbjct: 194 VQGHVAYPHLADN----PIHKAAPALAELANEKWDEGNAFFPATSLQIS--------NIN 241
Query: 282 SPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYK 341
TG N+ P E F+ R ++ D+I++R E + Y+I R Y
Sbjct: 242 GGTG-ATNVIPGELNIMFNLRFSTELNADVIKQR--SEAILQKHGLDYDI----EWRLY- 293
Query: 342 GRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANT 401
G P +T P ++A+ G T+D R++ G V+ P T
Sbjct: 294 GEPFLT---SKGPLIEATQKAIKHVRGSDTTLSTSGGTSDGRFIAPTGAQVVELGPCNAT 350
Query: 402 PILLHDHNEFLKDTVFLKGVEVYESVISSL 431
+H NE + + + +YE ++ L
Sbjct: 351 ---IHRINEQVLVSEIDQLSSIYEHILEEL 377
>sp|Q65US9|DAPE_MANSM Succinyl-diaminopimelate desuccinylase OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=dapE PE=3 SV=1
Length = 377
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 140/354 (39%), Gaps = 37/354 (10%)
Query: 84 WPGSDPSLPSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYI 142
W + P + F H D VP + ++W++PPFSA + ++ RG+ D K I
Sbjct: 52 WAKHGTTSPVVAFAGHTDVVPTGDENQWNYPPFSAQIVDD--MLYGRGAADMKGSLAAMI 109
Query: 143 EAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTN 202
A + N T+ DEE DG K VES R N+ + + G+ S+
Sbjct: 110 VAAEEYVKA-NPNHAGTIALLITSDEEAAAKDGTVKVVESLMARGENIDYCL-VGEPSSA 167
Query: 203 DDFR--VFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKA 260
V R + +G GH + + + A + K+ + +T+ ++D
Sbjct: 168 KQLGDVVKNGRRGSITGDLYIQGIQGHVA--YPHLAENPVHKATKFLTELTTYEWD---- 221
Query: 261 GRAANSEV---ISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIA 317
+E S+ + + AG S N+ P E F+ R V + I+ ++A
Sbjct: 222 ---NGNEFFPPTSLQIANIHAGTGSN-----NVIPGELYVQFNLRYCTEVTDEFIKNKVA 273
Query: 318 EEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILA 377
E +++Y I + G+P +T + ++ S G K +
Sbjct: 274 EMLQK--HDLTYRI-----DWNLSGKPFLT---KPGKLLNAVVESLESVAGIKPKLDTGG 323
Query: 378 STTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
T+D R++ +G V+ P+ T +H NE + EVY ++ +L
Sbjct: 324 GTSDGRFIALMGAEVVELGPLNAT---IHKVNECVSCRDLATLGEVYRQMLVNL 374
>sp|B8F824|DAPE_HAEPS Succinyl-diaminopimelate desuccinylase OS=Haemophilus parasuis
serovar 5 (strain SH0165) GN=dapE PE=3 SV=1
Length = 377
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 158/391 (40%), Gaps = 41/391 (10%)
Query: 47 NPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP-A 105
+PN + + Q++ +FK LE++P L L W P + F H D VP
Sbjct: 19 SPNDEGCQQLIAERLQAV--RFK-LEWLPFGDTLNL-WATHGEGEPCLAFAGHTDVVPEG 74
Query: 106 EPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYV 165
+ +W++PPFSA + ++ RG+ D K + A + N +
Sbjct: 75 DESQWTYPPFSAEIVDD--MLYGRGAADMKGSLAAMVIACETFV-KNNPNHQGKIALLIT 131
Query: 166 PDEEIGGFDGMAKFVESNEFRELNVGF-VMDEGQASTNDDFRVFYADRSPWHLIIRAKGA 224
DEE DG K VE+ R+ + + V+ E ++ V R + +G
Sbjct: 132 SDEEAAAKDGTVKVVETLMQRQEPIHYCVVGEPSSTKQLGDVVKNGRRGSITANLYIEGI 191
Query: 225 PGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVI---SVNLVYLKAGIP 281
GH + + + A + ++ +++ Q+D +E S+ + +KAG
Sbjct: 192 QGHVA--YPHLAENPVHTALPFLSELTAYQWD-------NGNEFFPPTSLQIANIKAGTG 242
Query: 282 SPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIR-DY 340
S N+ P E F+ R V+ ++I+ ++AE M + K I +
Sbjct: 243 SN-----NVIPGELYVQFNLRYCTEVNDEIIKTKVAE--------MLRKYGLKHRIEWNL 289
Query: 341 KGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMAN 400
G+P + D+ +AV + K + T+D R++ +G V+ F P+
Sbjct: 290 SGKPFLA---DNGKLVQATIQAVENVTQITPKLDTGGGTSDGRFIALMGAEVVEFGPINQ 346
Query: 401 TPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
T +H NE + K EVY ++ S+
Sbjct: 347 T---IHKVNECVNVNDLGKCGEVYYQILCSV 374
>sp|A9CKC4|DAPE_AGRT5 Succinyl-diaminopimelate desuccinylase OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=dapE PE=3 SV=1
Length = 398
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 139/353 (39%), Gaps = 46/353 (13%)
Query: 92 PSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLIL 150
P ++F H D VP + WSHPPFSA G+++ RG+ D K ++ AI I
Sbjct: 66 PHLMFAGHTDVVPVGDEAAWSHPPFSA--DIAGGEMYGRGAVDMKGGIACFVAAIARHI- 122
Query: 151 VKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFR-ELNVGFVMDEGQASTNDDFRVFY 209
K+ KP +V DEE +G +K +E + E V+ E +
Sbjct: 123 GKHGKPQGSVSFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQLGDMIKI 182
Query: 210 ADRSPWHLIIRAKGAPGHGS--RMFDNGAMENLMKSVE--MITKFRESQFDVVKAGRAAN 265
R I +G GH + + DN + L++ M F D + +N
Sbjct: 183 GRRGSLSGRITVQGVQGHAAYPHLADN-PIRGLLQLTHALMHPAFDHGTDDF----QPSN 237
Query: 266 SEVISVNLVYLKAGIPSPTG-FVMNMQPSEAEAGFDARL-----PPTVDPDLIRRRIAE- 318
EV +V+ TG N+ P+ A A F+ R ++ ++IRR A
Sbjct: 238 LEVTTVD-----------TGNAATNVIPARATAAFNIRFNDSWTAESLRAEIIRRLDAAA 286
Query: 319 ---EWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEI 375
E P + YEI+ + RP +N S A+ + GK K
Sbjct: 287 NEGELRPDRAPVKYEIV-------WADRPSHVFLTRNNALISSLSGAIETVTGKEPKLST 339
Query: 376 LASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVI 428
T+DAR+++ PV+ F + T +H +E + +YE+ I
Sbjct: 340 TGGTSDARFIKDY-CPVVEFGLVGQT---MHMVDERVAVADLETLTRIYETFI 388
>sp|Q15TS8|DAPE_PSEA6 Succinyl-diaminopimelate desuccinylase OS=Pseudoalteromonas
atlantica (strain T6c / ATCC BAA-1087) GN=dapE PE=3 SV=1
Length = 376
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 139/353 (39%), Gaps = 35/353 (9%)
Query: 84 WPGSDPSLPSILFNSHLDSVPAEP-DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYI 142
W P F H D VP+ P +KW+ PPF+A + GQ++ RG+ D K +
Sbjct: 52 WARKGTGGPVFCFAGHTDVVPSGPAEKWTFPPFTA--TQHEGQLYGRGAADMKGSLAAML 109
Query: 143 EAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVM-DEGQAST 201
A + + K+ + ++ DEE +G + +++ E R + + + E ++T
Sbjct: 110 VATKAFV-TKHPEHSGSIAFLITSDEEGPFINGTTRVIDTLEARNEKMTWCLVGEPSSTT 168
Query: 202 NDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG 261
V R I KG GH + + A + S + ++ +D A
Sbjct: 169 LIGDVVKNGRRGSLTGDITVKGVQGH--VAYPHLAKNPIHLSAPAFAELAQTHWDSGNAS 226
Query: 262 RAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTV-DPDLIRR--RIAE 318
S +S I S TG N+ P + A F+ R V D LI R I +
Sbjct: 227 FPPTSFQVS--------NINSGTG-AGNVIPGDLSACFNFRFSTEVTDKQLIERVTTILD 277
Query: 319 EWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS 378
++ + Y I + G+P +T DS + A+ G+ +
Sbjct: 278 KY-----DFDYHIDWT-----FNGQPFLT---DSGKLVEATQSAIKDVTGRETELSTAGG 324
Query: 379 TTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSL 431
T+D R++ G V+ P+ N I D N + D L ++YE ++ L
Sbjct: 325 TSDGRFIAPTGAQVIELGPI-NATIHKIDENVNINDLAQL--AKIYEGILQRL 374
>sp|Q1MM75|DAPE_RHIL3 Succinyl-diaminopimelate desuccinylase OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=dapE PE=3 SV=1
Length = 397
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 141/349 (40%), Gaps = 36/349 (10%)
Query: 92 PSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLIL 150
P ++F H D VP + W+HPPF+A S G++F RG+ D K ++ A+ I
Sbjct: 66 PHLMFAGHTDVVPVGDEAAWTHPPFAAEIS--KGELFGRGAVDMKGGIACFVAAVARHI- 122
Query: 151 VKNFKPIRTVHASYVPDEEIGGFDGMAKFVE-SNEFRELNVGFVMDEGQASTNDDFRVFY 209
K+ +P ++ DEE +G K ++ + E E ++ E +
Sbjct: 123 EKSGQPKGSISFLITGDEEGPAINGTIKLLQWAAERGERWDACLVGEPTNPDRLGDMIKI 182
Query: 210 ADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVI 269
R I G GH + + + A + ++M + FD G + +
Sbjct: 183 GRRGSLSGKITVHGVQGHAA--YPHLADNPVRGMLQMTHALMDPPFD----GGTDDFQPS 236
Query: 270 SVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLP-----PTVDPDLIRRRIAE----EW 320
++ + + G P+ N+ P++A A F+ R T+ +++RR A E
Sbjct: 237 NLEVTTVDVGNPA-----TNVIPAKASASFNIRFNDSWTVETLRAEILRRLDAAAGNGEL 291
Query: 321 APAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTT 380
P + Y+I+ + RP +N + AV S G+ K T+
Sbjct: 292 RPGRDPVKYDIV-------WADRPSHVFLTRNNALIASLSSAVESVSGQSPKLSTTGGTS 344
Query: 381 DARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVIS 429
DAR+++ PV+ F + T +H +E + +YE+ I+
Sbjct: 345 DARFIKDY-CPVVEFGLVGQT---MHMVDERVAVADLETLTAIYETFIA 389
>sp|B3H2U3|DAPE_ACTP7 Succinyl-diaminopimelate desuccinylase OS=Actinobacillus
pleuropneumoniae serotype 7 (strain AP76) GN=dapE PE=3
SV=1
Length = 377
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 143/371 (38%), Gaps = 44/371 (11%)
Query: 70 TLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFA 128
TLE++P L L W P ++F H D VP + +W +PPFSA G ++
Sbjct: 39 TLEWLPFGDTLNL-WATHGTQDPCVVFAGHTDVVPVGDETQWQYPPFSA--EIVDGTLYG 95
Query: 129 RGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVP-DEEIGGFDGMAKFVESNEFRE 187
RG+ D K + A VKN + A + DEE G K VE+ R+
Sbjct: 96 RGAADMKGSLAALVIAAETF--VKNNPNHKGKIALLITSDEEAAAKAGTVKVVETLMARQ 153
Query: 188 LNVGF-VMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEM 246
V + V+ E + + R + +G GH + + + A + S+
Sbjct: 154 EAVHYAVVGEPSSGKVLGDVIKNGRRGSITGELYIEGVQGHVA--YPHLAENPVHTSLNF 211
Query: 247 ITKFRESQFDVVKAGRAANSEVI---SVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARL 303
+T+ Q+D +E S+ + +KAG S N+ P E F+ R
Sbjct: 212 LTELTTYQWD-------NGNEFFPPTSLQIANIKAGTGSN-----NVIPGELYVQFNLRY 259
Query: 304 PPTVDPDLIRRRIAEEWAPAIRNMSYEI---IEKGPIRDYKGRPLMTLTDDSNPWWSVFK 360
V ++I+ ++AE A + + I + P G + +
Sbjct: 260 CTEVTDEIIKNKVAEMLAK--HQLKHRISWNLSGQPFLAGNGELVKATVQAVENVTKITP 317
Query: 361 RAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKG 420
R TS G T+D R++ +G V+ F P+ T +H NE + K
Sbjct: 318 RLDTSGG-----------TSDGRFIALMGAEVVEFGPLNAT---IHKVNECVSVEDLGKC 363
Query: 421 VEVYESVISSL 431
EVY ++ L
Sbjct: 364 GEVYYHILERL 374
>sp|A3N3G9|DAPE_ACTP2 Succinyl-diaminopimelate desuccinylase OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=dapE PE=3
SV=1
Length = 377
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 143/371 (38%), Gaps = 44/371 (11%)
Query: 70 TLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFA 128
TLE++P L L W P ++F H D VP + +W +PPFSA G ++
Sbjct: 39 TLEWLPFGDTLNL-WATHGTQDPCVVFAGHTDVVPVGDETQWQYPPFSA--EIVDGTLYG 95
Query: 129 RGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVP-DEEIGGFDGMAKFVESNEFRE 187
RG+ D K + A VKN + A + DEE G K VE+ R+
Sbjct: 96 RGAADMKGSLAALVIAAETF--VKNNPNHKGKIALLITSDEEAAAKAGTVKVVETLMARQ 153
Query: 188 LNVGF-VMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEM 246
V + V+ E + + R + +G GH + + + A + S+
Sbjct: 154 EAVHYAVVGEPSSGKVLGDVIKNGRRGSITGELYIEGVQGHVA--YPHLAENPVHTSLNF 211
Query: 247 ITKFRESQFDVVKAGRAANSEVI---SVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARL 303
+T+ Q+D +E S+ + +KAG S N+ P E F+ R
Sbjct: 212 LTELTTYQWD-------NGNEFFPPTSLQIANIKAGTGSN-----NVIPGELYVQFNLRY 259
Query: 304 PPTVDPDLIRRRIAEEWAPAIRNMSYEI---IEKGPIRDYKGRPLMTLTDDSNPWWSVFK 360
V ++I+ ++AE A + + I + P G + +
Sbjct: 260 CTEVTDEIIKNKVAEMLAK--HQLKHRISWNLSGQPFLAGNGELVKATVQAVENVTKITP 317
Query: 361 RAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKG 420
R TS G T+D R++ +G V+ F P+ T +H NE + K
Sbjct: 318 RLDTSGG-----------TSDGRFIALMGAEVVEFGPLNAT---IHKVNECVSVEDLGKC 363
Query: 421 VEVYESVISSL 431
EVY ++ L
Sbjct: 364 GEVYYHILERL 374
>sp|Q83DN2|DAPE_COXBU Succinyl-diaminopimelate desuccinylase OS=Coxiella burnetii (strain
RSA 493 / Nine Mile phase I) GN=dapE PE=3 SV=1
Length = 374
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 154/410 (37%), Gaps = 79/410 (19%)
Query: 48 PNYTAPVSFLISQAQSIGLQFKTLEF--VPNKPILLLTWPGSDPSLPSILFNSHLDSV-P 104
PN + LI + +S+G Q + L F V N W G P I+F H D V P
Sbjct: 19 PNDAGCQTILIDRLKSVGFQCEHLPFGEVHN----FWAWHGHQS--PFIIFAGHTDVVPP 72
Query: 105 AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASY 164
+ +W PPF+ + + G I+ RG+ D K + A N + +N T+
Sbjct: 73 GDETQWHSPPFTP--TEKNGYIYGRGAADMKSGLAAMVVAAENFV-KQNPDHNGTIGFIV 129
Query: 165 VPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDF--RVFYADRSPWHLIIRAK 222
DEE +G K V+ + + + + + + G+AS+N+ + R H +
Sbjct: 130 TSDEEGPAENGTQKVVDYLQQKNIKLDYCI-VGEASSNEKLGDAIKIGRRGSMHGELTII 188
Query: 223 GAPGHGS--RMFDN------GAMENLMKSVEMITKFRES---------QFDVVKAGRAAN 265
G GH + + DN A E L K TK+ E QF V+AG A
Sbjct: 189 GKQGHIAYPHLADNPIHRSFQAFEALAK-----TKWDEGNEHFTPTSFQFYNVEAGAGA- 242
Query: 266 SEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIR 325
N+ P+ +A F+ R P +++++ E
Sbjct: 243 ----------------------ANVIPATLKAKFNFRFAPIHTTQQLQQKV--ERILNYY 278
Query: 326 NMSYEI---IEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDA 382
++Y+I + P GR L T ++A+ +P T+D
Sbjct: 279 QLNYDIQWNVSSQPFFSGNGR-LATFV----------RQAIQEICHLNTEPNTYGGTSDG 327
Query: 383 RYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLS 432
R++ G V+ P+ T H NE + K ++Y + L+
Sbjct: 328 RFIATTGCEVIELGPVNKTA---HHVNENICIADLEKLTDIYFRTLQLLT 374
>sp|A9KC82|DAPE_COXBN Succinyl-diaminopimelate desuccinylase OS=Coxiella burnetii (strain
Dugway 5J108-111) GN=dapE PE=3 SV=1
Length = 374
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 154/410 (37%), Gaps = 79/410 (19%)
Query: 48 PNYTAPVSFLISQAQSIGLQFKTLEF--VPNKPILLLTWPGSDPSLPSILFNSHLDSV-P 104
PN + LI + +S+G Q + L F V N W G P I+F H D V P
Sbjct: 19 PNDAGCQTILIDRLKSVGFQCEHLPFGEVHN----FWAWHGHQS--PFIIFAGHTDVVPP 72
Query: 105 AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASY 164
+ +W PPF+ + + G I+ RG+ D K + A N + +N T+
Sbjct: 73 GDETQWHSPPFTP--TEKNGYIYGRGAADMKSGLAAMVVAAENFV-KQNPDHNGTIGFIV 129
Query: 165 VPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDF--RVFYADRSPWHLIIRAK 222
DEE +G K V+ + + + + + + G+AS+N+ + R H +
Sbjct: 130 TSDEEGPAENGTQKVVDYLQQKNIKLDYCI-VGEASSNEKLGDAIKIGRRGSMHGELTII 188
Query: 223 GAPGHGS--RMFDN------GAMENLMKSVEMITKFRES---------QFDVVKAGRAAN 265
G GH + + DN A E L K TK+ E QF V+AG A
Sbjct: 189 GKQGHIAYPHLADNPIHRSFQAFEALAK-----TKWDEGNEHFTPTSFQFYNVEAGAGA- 242
Query: 266 SEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIR 325
N+ P+ +A F+ R P +++++ E
Sbjct: 243 ----------------------ANVIPATLKAKFNFRFAPIHTTQQLQQKV--ERILNYY 278
Query: 326 NMSYEI---IEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDA 382
++Y+I + P GR L T ++A+ +P T+D
Sbjct: 279 QLNYDIQWNVSSQPFFSGNGR-LATFV----------RQAIQEICHLNTEPNTYGGTSDG 327
Query: 383 RYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLS 432
R++ G V+ P+ T H NE + K ++Y + L+
Sbjct: 328 RFIATTGCEVIELGPVNKTA---HHVNENICIADLEKLTDIYFRTLQLLT 374
>sp|B6J120|DAPE_COXB2 Succinyl-diaminopimelate desuccinylase OS=Coxiella burnetii (strain
CbuG_Q212) GN=dapE PE=3 SV=1
Length = 374
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 154/410 (37%), Gaps = 79/410 (19%)
Query: 48 PNYTAPVSFLISQAQSIGLQFKTLEF--VPNKPILLLTWPGSDPSLPSILFNSHLDSV-P 104
PN + LI + +S+G Q + L F V N W G P I+F H D V P
Sbjct: 19 PNDAGCQTILIDRLKSVGFQCEHLPFGEVHN----FWAWHGHQS--PFIIFAGHTDVVPP 72
Query: 105 AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASY 164
+ +W PPF+ + + G I+ RG+ D K + A N + +N T+
Sbjct: 73 GDETQWHSPPFTP--TEKNGYIYGRGAADMKSGLAAMVVAAENFV-KQNPDHNGTIGFIV 129
Query: 165 VPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDF--RVFYADRSPWHLIIRAK 222
DEE +G K V+ + + + + + + G+AS+N+ + R H +
Sbjct: 130 TSDEEGPAENGTQKVVDYLQQKNIKLDYCI-VGEASSNEKLGDAIKIGRRGSMHGELTII 188
Query: 223 GAPGHGS--RMFDN------GAMENLMKSVEMITKFRES---------QFDVVKAGRAAN 265
G GH + + DN A E L K TK+ E QF V+AG A
Sbjct: 189 GKQGHIAYPHLADNPIHRSFQAFEALAK-----TKWDEGNEHFTPTSFQFYNVEAGAGA- 242
Query: 266 SEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIR 325
N+ P+ +A F+ R P +++++ E
Sbjct: 243 ----------------------ANVIPATLKAKFNFRFAPIHTTQQLQQKV--ERILNYY 278
Query: 326 NMSYEI---IEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDA 382
++Y+I + P GR L T ++A+ +P T+D
Sbjct: 279 QLNYDIQWNVSSQPFFSGNGR-LATFV----------RQAIQEICHLNTEPNTYGGTSDG 327
Query: 383 RYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLS 432
R++ G V+ P+ T H NE + K ++Y + L+
Sbjct: 328 RFIATTGCEVIELGPVNKTA---HHVNENICIADLEKLTDIYFRTLQLLT 374
>sp|B6J929|DAPE_COXB1 Succinyl-diaminopimelate desuccinylase OS=Coxiella burnetii (strain
CbuK_Q154) GN=dapE PE=3 SV=1
Length = 374
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 154/410 (37%), Gaps = 79/410 (19%)
Query: 48 PNYTAPVSFLISQAQSIGLQFKTLEF--VPNKPILLLTWPGSDPSLPSILFNSHLDSV-P 104
PN + LI + +S+G Q + L F V N W G P I+F H D V P
Sbjct: 19 PNDAGCQTILIDRLKSVGFQCEHLPFGEVHN----FWAWHGHQS--PFIIFAGHTDVVPP 72
Query: 105 AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASY 164
+ +W PPF+ + + G I+ RG+ D K + A N + +N T+
Sbjct: 73 GDETQWHSPPFTP--TEKNGYIYGRGAADMKSGLAAMVVAAENFV-KQNPDHNGTIGFIV 129
Query: 165 VPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDF--RVFYADRSPWHLIIRAK 222
DEE +G K V+ + + + + + + G+AS+N+ + R H +
Sbjct: 130 TSDEEGPAENGTQKVVDYLQQKNIKLDYCI-VGEASSNEKLGDAIKIGRRGSMHGELTII 188
Query: 223 GAPGHGS--RMFDN------GAMENLMKSVEMITKFRES---------QFDVVKAGRAAN 265
G GH + + DN A E L K TK+ E QF V+AG A
Sbjct: 189 GKQGHIAYPHLADNPIHRSFQAFEALAK-----TKWDEGNEHFTPTSFQFYNVEAGAGA- 242
Query: 266 SEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIR 325
N+ P+ +A F+ R P +++++ E
Sbjct: 243 ----------------------ANVIPATLKAKFNFRFAPIHTTQQLQQKV--ERILNYY 278
Query: 326 NMSYEI---IEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDA 382
++Y+I + P GR L T ++A+ +P T+D
Sbjct: 279 QLNYDIQWNVSSQPFFSGNGR-LATFV----------RQAIQEICHLNTEPNTYGGTSDG 327
Query: 383 RYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLS 432
R++ G V+ P+ T H NE + K ++Y + L+
Sbjct: 328 RFIATTGCEVIELGPVNKTA---HHVNENICIADLEKLTDIYFRTLQLLT 374
>sp|A9NCE9|DAPE_COXBR Succinyl-diaminopimelate desuccinylase OS=Coxiella burnetii (strain
RSA 331 / Henzerling II) GN=dapE PE=3 SV=1
Length = 374
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 151/402 (37%), Gaps = 79/402 (19%)
Query: 48 PNYTAPVSFLISQAQSIGLQFKTLEF--VPNKPILLLTWPGSDPSLPSILFNSHLDSV-P 104
PN + LI + +S+G Q + L F V N W G P I+F H D V P
Sbjct: 19 PNDAGCQTILIDRLKSVGFQCEHLPFGEVHN----FWAWHGHQS--PFIIFAGHTDVVPP 72
Query: 105 AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASY 164
+ +W PPF+ + + G I+ RG+ D K + A N + +N T+
Sbjct: 73 GDETQWHSPPFTP--TEKNGYIYGRGAADMKSGLAAMVVAAENFV-KQNPDHNGTIGFIV 129
Query: 165 VPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDF--RVFYADRSPWHLIIRAK 222
DEE +G K V+ + + + + + + G+AS+N+ + R H +
Sbjct: 130 TSDEEGPAENGTQKVVDYLQQKNIKLDYCI-VGEASSNEKLGDAIKIGRRGSMHGELTII 188
Query: 223 GAPGHGS--RMFDN------GAMENLMKSVEMITKFRES---------QFDVVKAGRAAN 265
G GH + + DN A E L K TK+ E QF V+AG A
Sbjct: 189 GKQGHIAYPHLADNPIHRSFQAFEALAK-----TKWDEGNEHFTPTSFQFYNVEAGAGA- 242
Query: 266 SEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIR 325
N+ P+ +A F+ R P +++++ E
Sbjct: 243 ----------------------ANVIPATLKAKFNFRFAPIHTTQQLQQKV--ERILNYY 278
Query: 326 NMSYEI---IEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDA 382
++Y+I + P GR L T ++A+ +P T+D
Sbjct: 279 QLNYDIQWNVSSQPFFSGNGR-LATFV----------RQAIQEICHLNTEPNTYGGTSDG 327
Query: 383 RYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVY 424
R++ G V+ P+ T H NE + K ++Y
Sbjct: 328 RFIATTGCEVIELGPVNKTA---HHVNENICIADLEKLTDIY 366
>sp|B9J8D0|DAPE_AGRRK Succinyl-diaminopimelate desuccinylase OS=Agrobacterium radiobacter
(strain K84 / ATCC BAA-868) GN=dapE PE=3 SV=1
Length = 397
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 130/353 (36%), Gaps = 46/353 (13%)
Query: 92 PSILFNSHLDSVP-AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLIL 150
P ++F H D VP + WSHPPF+A G++F RG+ D K + A+ I
Sbjct: 66 PHLMFAGHTDVVPVGDAASWSHPPFAA--DIAGGELFGRGAVDMKGGIACFAAAVARHI- 122
Query: 151 VKNFKPIRTVHASYVPDEEIGGFDGMAKFVE--SNEFRELNVGFVMDEGQASTNDDF--R 206
K+ P ++ DEE +G K ++ + + + V G+ + D
Sbjct: 123 EKHGPPAGSISFLITGDEEGPAINGTVKLLQWAAERGEQWDASLV---GEPTNPDQLGDM 179
Query: 207 VFYADRSPWHLIIRAKGAPGHGS--RMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAA 264
+ R I G GH + + DN V I K E+ D
Sbjct: 180 IKIGRRGSISGFITVHGVQGHAAYPHLADN--------PVRSIVKLTEALLDPPFDAGTD 231
Query: 265 NSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRI-------- 316
N + ++ + + G N+ P++A A F+ R T + +R I
Sbjct: 232 NFQPSNLEVTTIDVG-----NAATNVIPAKATAAFNIRFNDTWTVETLRAEILARLDAAA 286
Query: 317 -AEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEI 375
+ P Y+I + RP +N + AV + G K
Sbjct: 287 ADQTLRPGREPTKYDIT-------WSDRPSQVFLTRNNALIASLSSAVENVTGHTPKLST 339
Query: 376 LASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVI 428
T+DAR+++ PV+ F + T +H +E + E+YE+ I
Sbjct: 340 TGGTSDARFIKDY-CPVVEFGLVGQT---MHMVDERVAVADLETLTEIYETFI 388
>sp|Q8YDB0|DAPE_BRUME Succinyl-diaminopimelate desuccinylase OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=dapE
PE=3 SV=1
Length = 395
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 146/349 (41%), Gaps = 35/349 (10%)
Query: 92 PSILFNSHLDSVPAEPDK-WSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAI-RNLI 149
P ++F H D VP +K W HPPF+A + E G ++ RG+ D K ++ A+ R++
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAA--AIEDGVMYGRGAVDMKGGIACFVAAVARHIE 124
Query: 150 LVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFR--ELNVGFVMDEGQASTNDDFRV 207
N K ++ DEE +G K +E + R + V + + D +
Sbjct: 125 KHGNIKG--SISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDM-I 181
Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG-RAANS 266
R I G GH + + + A + V ++ FD A +A+N
Sbjct: 182 KIGRRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLCPAFDEGTANFQASNL 239
Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
EV +++ V KA N+ P++A A F+ R T + ++ I A R+
Sbjct: 240 EVTTID-VGNKA---------TNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARD 289
Query: 327 MSYEIIEKGPIR---DYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS--TTD 381
+ PI+ ++ RP +V + GK +PE+ S T+D
Sbjct: 290 NRLRQGRETPIKYELTWRERPSHVFLTHDEKLIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGV-EVYESVIS 429
AR+++ PV+ F T + + D L D L+G+ ++YE I+
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT-MHMVDERVALAD---LEGLTQIYERFIA 391
>sp|C0RMH0|DAPE_BRUMB Succinyl-diaminopimelate desuccinylase OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=dapE PE=3 SV=1
Length = 395
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 146/351 (41%), Gaps = 35/351 (9%)
Query: 92 PSILFNSHLDSVPAEPDK-WSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAI-RNLI 149
P ++F H D VP +K W HPPF+A + E G ++ RG+ D K ++ A+ R++
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAA--AIEDGVMYGRGAVDMKGGIACFVAAVARHIE 124
Query: 150 LVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFR--ELNVGFVMDEGQASTNDDFRV 207
N K ++ DEE +G K +E + R + V + + D +
Sbjct: 125 KHGNIKG--SISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDM-I 181
Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG-RAANS 266
R I G GH + + + A + V ++ FD A +A+N
Sbjct: 182 KIGRRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLYPAFDEGTANFQASNL 239
Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
EV +++ V KA N+ P++A A F+ R T + ++ I A R+
Sbjct: 240 EVTTID-VGNKA---------TNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARD 289
Query: 327 MSYEIIEKGPIR---DYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS--TTD 381
+ PI+ ++ RP +V + GK +PE+ S T+D
Sbjct: 290 NRLRQGRETPIKYELTWRERPSHVFLTHDEKLIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGV-EVYESVISSL 431
AR+++ PV+ F T + + D L D L+G+ ++YE I+
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT-MHMVDERVALAD---LEGLTQIYERFIADF 393
>sp|Q8FV22|DAPE_BRUSU Succinyl-diaminopimelate desuccinylase OS=Brucella suis biovar 1
(strain 1330) GN=dapE PE=3 SV=1
Length = 395
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 146/351 (41%), Gaps = 35/351 (9%)
Query: 92 PSILFNSHLDSVPAEPDK-WSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAI-RNLI 149
P ++F H D VP +K W HPPF+A + E G ++ RG+ D K ++ A+ R++
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAA--AIEDGVMYGRGAVDMKGGIACFVAAVARHIE 124
Query: 150 LVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFR--ELNVGFVMDEGQASTNDDFRV 207
N K ++ DEE +G K +E + R + V + + D +
Sbjct: 125 KHGNIKG--SISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDM-I 181
Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG-RAANS 266
R I G GH + + + A + V ++ FD A +A+N
Sbjct: 182 KIGRRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLYPAFDEGTANFQASNL 239
Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
EV +++ V KA N+ P++A A F+ R T + ++ I A R+
Sbjct: 240 EVTTID-VGNKA---------TNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARD 289
Query: 327 MSYEIIEKGPIR---DYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS--TTD 381
+ PI+ ++ RP +V + GK +PE+ S T+D
Sbjct: 290 NRLRQGRETPIKYELTWRERPSHVFLTHDEKLIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGV-EVYESVISSL 431
AR+++ PV+ F T + + D L D L+G+ ++YE I+
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT-MHMVDERVALAD---LEGLTQIYERFIADF 393
>sp|A9WW41|DAPE_BRUSI Succinyl-diaminopimelate desuccinylase OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=dapE PE=3 SV=1
Length = 395
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 146/351 (41%), Gaps = 35/351 (9%)
Query: 92 PSILFNSHLDSVPAEPDK-WSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAI-RNLI 149
P ++F H D VP +K W HPPF+A + E G ++ RG+ D K ++ A+ R++
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAA--AIEDGVMYGRGAVDMKGGIACFVAAVARHIE 124
Query: 150 LVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFR--ELNVGFVMDEGQASTNDDFRV 207
N K ++ DEE +G K +E + R + V + + D +
Sbjct: 125 KHGNIKG--SISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDM-I 181
Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG-RAANS 266
R I G GH + + + A + V ++ FD A +A+N
Sbjct: 182 KIGRRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLYPAFDEGTANFQASNL 239
Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
EV +++ V KA N+ P++A A F+ R T + ++ I A R+
Sbjct: 240 EVTTID-VGNKA---------TNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARD 289
Query: 327 MSYEIIEKGPIR---DYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS--TTD 381
+ PI+ ++ RP +V + GK +PE+ S T+D
Sbjct: 290 NRLRQGRETPIKYELTWRERPSHVFLTHDEKLIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGV-EVYESVISSL 431
AR+++ PV+ F T + + D L D L+G+ ++YE I+
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT-MHMVDERVALAD---LEGLTQIYERFIADF 393
>sp|A5VVT7|DAPE_BRUO2 Succinyl-diaminopimelate desuccinylase OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=dapE PE=3 SV=1
Length = 395
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 146/351 (41%), Gaps = 35/351 (9%)
Query: 92 PSILFNSHLDSVPAEPDK-WSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAI-RNLI 149
P ++F H D VP +K W HPPF+A + E G ++ RG+ D K ++ A+ R++
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAA--AIEDGVMYGRGAVDMKGGIACFVAAVARHIE 124
Query: 150 LVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFR--ELNVGFVMDEGQASTNDDFRV 207
N K ++ DEE +G K +E + R + V + + D +
Sbjct: 125 KHGNIKG--SISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDM-I 181
Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG-RAANS 266
R I G GH + + + A + V ++ FD A +A+N
Sbjct: 182 KIGRRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLYPAFDEGTANFQASNL 239
Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
EV +++ V KA N+ P++A A F+ R T + ++ I A R+
Sbjct: 240 EVTTID-VGNKA---------TNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARD 289
Query: 327 MSYEIIEKGPIR---DYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS--TTD 381
+ PI+ ++ RP +V + GK +PE+ S T+D
Sbjct: 290 NRLRQGRETPIKYELTWRERPSHVFLTHDEKLIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGV-EVYESVISSL 431
AR+++ PV+ F T + + D L D L+G+ ++YE I+
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT-MHMVDERVALAD---LEGLTQIYERFIADF 393
>sp|A9MCV6|DAPE_BRUC2 Succinyl-diaminopimelate desuccinylase OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=dapE PE=3 SV=1
Length = 395
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 146/351 (41%), Gaps = 35/351 (9%)
Query: 92 PSILFNSHLDSVPAEPDK-WSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAI-RNLI 149
P ++F H D VP +K W HPPF+A + E G ++ RG+ D K ++ A+ R++
Sbjct: 67 PHLMFAGHTDVVPPGDEKDWKHPPFAA--AIEDGVMYGRGAVDMKGGIACFVAAVARHIE 124
Query: 150 LVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFR--ELNVGFVMDEGQASTNDDFRV 207
N K ++ DEE +G K +E + R + V + + D +
Sbjct: 125 KHGNIKG--SISFLITGDEEGPAVNGTVKLLEWAKQRGESWDASIVGEPTNPNALGDM-I 181
Query: 208 FYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAG-RAANS 266
R I G GH + + + A + V ++ FD A +A+N
Sbjct: 182 KIGRRGSLSGTITVHGVQGHAA--YPHLAENPVRGIVTLVDSLLYPAFDEGTANFQASNL 239
Query: 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRN 326
EV +++ V KA N+ P++A A F+ R T + ++ I A R+
Sbjct: 240 EVTTID-VGNKA---------TNVIPNKATASFNIRFNDTWTAESLQAEIISRLERAARD 289
Query: 327 MSYEIIEKGPIR---DYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAS--TTD 381
+ PI+ ++ RP +V + GK +PE+ S T+D
Sbjct: 290 NRLRQGRETPIKYELTWRERPSHVFLTHDEKLIGTLTASVEAVTGK--RPELSTSGGTSD 347
Query: 382 ARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGV-EVYESVISSL 431
AR+++ PV+ F T + + D L D L+G+ ++YE I+
Sbjct: 348 ARFIKDY-CPVVEFGLTGQT-MHMVDERVALAD---LEGLTQIYERFIADF 393
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,367,519
Number of Sequences: 539616
Number of extensions: 7410401
Number of successful extensions: 16634
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 16451
Number of HSP's gapped (non-prelim): 335
length of query: 439
length of database: 191,569,459
effective HSP length: 121
effective length of query: 318
effective length of database: 126,275,923
effective search space: 40155743514
effective search space used: 40155743514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)