Query 013641
Match_columns 439
No_of_seqs 139 out of 1674
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 14:22:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfo_A Putative acetylornithin 100.0 7.2E-56 2.5E-60 447.4 37.1 377 26-434 23-430 (433)
2 1vgy_A Succinyl-diaminopimelat 100.0 6.8E-55 2.3E-59 434.7 38.8 374 27-435 4-381 (393)
3 3isz_A Succinyl-diaminopimelat 100.0 3.5E-54 1.2E-58 427.2 41.6 371 28-433 2-376 (377)
4 3ct9_A Acetylornithine deacety 100.0 3.8E-53 1.3E-57 416.4 33.3 345 27-432 9-355 (356)
5 2f7v_A Aectylcitrulline deacet 100.0 4.3E-53 1.5E-57 418.2 33.7 354 26-430 6-367 (369)
6 3pfe_A Succinyl-diaminopimelat 100.0 2.7E-52 9.3E-57 425.1 37.3 385 29-433 18-470 (472)
7 1cg2_A Carboxypeptidase G2; me 100.0 6.5E-53 2.2E-57 420.4 30.4 367 26-433 16-391 (393)
8 2pok_A Peptidase, M20/M25/M40 100.0 1E-51 3.5E-56 422.3 38.4 387 27-431 41-480 (481)
9 3rza_A Tripeptidase; phosphory 100.0 1.8E-51 6.1E-56 410.4 35.0 364 23-435 18-395 (396)
10 3gb0_A Peptidase T; NP_980509. 100.0 1.9E-51 6.4E-56 407.1 34.3 357 26-431 3-371 (373)
11 2zog_A Cytosolic non-specific 100.0 3.4E-51 1.2E-55 418.4 37.0 392 26-434 17-477 (479)
12 3tx8_A Succinyl-diaminopimelat 100.0 7.2E-51 2.5E-55 402.4 38.0 352 28-429 12-368 (369)
13 3dlj_A Beta-Ala-His dipeptidas 100.0 2.2E-50 7.4E-55 412.6 39.1 392 26-434 22-484 (485)
14 2rb7_A Peptidase, M20/M25/M40 100.0 1E-51 3.6E-56 407.3 26.8 350 27-434 4-361 (364)
15 1ysj_A Protein YXEP; M20 famil 100.0 2.3E-51 7.7E-56 410.5 28.8 367 24-433 27-401 (404)
16 1xmb_A IAA-amino acid hydrolas 100.0 6E-51 2.1E-55 409.2 32.0 365 29-434 28-404 (418)
17 3ife_A Peptidase T; metallopep 100.0 7.1E-52 2.4E-56 418.0 24.6 361 27-433 25-432 (434)
18 3io1_A Aminobenzoyl-glutamate 100.0 8.7E-50 3E-54 403.5 30.1 370 26-436 11-436 (445)
19 3khx_A Putative dipeptidase sa 100.0 3.3E-48 1.1E-52 396.5 34.6 367 26-433 31-490 (492)
20 3mru_A Aminoacyl-histidine dip 100.0 2.2E-48 7.7E-53 397.3 31.8 362 25-433 10-488 (490)
21 2qyv_A XAA-His dipeptidase; YP 100.0 1.8E-48 6.3E-53 398.6 31.1 355 25-433 7-486 (487)
22 1fno_A Peptidase T; metallo pe 100.0 1.1E-47 3.8E-52 385.6 29.6 359 29-434 2-407 (417)
23 1lfw_A PEPV; hydrolase, dipept 100.0 1.2E-46 4.3E-51 383.7 33.8 369 26-435 11-468 (470)
24 2v8h_A Beta-alanine synthase; 100.0 2.2E-43 7.6E-48 359.4 28.7 349 25-434 28-448 (474)
25 1z2l_A Allantoate amidohydrola 100.0 1.1E-43 3.7E-48 357.3 25.9 351 27-435 7-413 (423)
26 3n5f_A L-carbamoylase, N-carba 100.0 4.9E-43 1.7E-47 350.8 29.2 348 27-433 3-407 (408)
27 3ram_A HMRA protein; two-domai 100.0 1.8E-43 6.2E-48 351.8 23.8 346 26-433 13-374 (394)
28 3t68_A Succinyl-diaminopimelat 100.0 1.9E-37 6.6E-42 292.4 26.3 258 26-433 3-268 (268)
29 4h2k_A Succinyl-diaminopimelat 100.0 3.7E-36 1.3E-40 283.7 26.8 260 28-433 5-268 (269)
30 1q7l_A Aminoacylase-1; catalys 100.0 6.7E-36 2.3E-40 268.9 17.5 194 23-219 4-198 (198)
31 2fvg_A Endoglucanase; TM1049, 100.0 2.4E-28 8.3E-33 238.1 12.0 255 34-433 3-335 (340)
32 1vhe_A Aminopeptidase/glucanas 99.9 5.6E-25 1.9E-29 216.9 21.7 262 28-433 6-354 (373)
33 2wyr_A Cobalt-activated peptid 99.9 3.1E-25 1.1E-29 215.4 19.1 247 30-431 3-332 (332)
34 2wzn_A TET3, 354AA long hypoth 99.9 8.8E-28 3E-32 232.9 -8.1 335 32-434 12-350 (354)
35 2gre_A Deblocking aminopeptida 99.9 3.1E-24 1E-28 209.8 16.0 253 26-430 3-344 (349)
36 1y0y_A FRV operon protein FRVX 99.9 2.7E-23 9.2E-28 203.4 17.9 255 31-433 8-350 (353)
37 1vho_A Endoglucanase; structur 99.9 1.7E-21 5.8E-26 190.2 19.6 254 29-434 5-337 (346)
38 3cpx_A Aminopeptidase, M42 fam 99.9 6.8E-22 2.3E-26 190.6 14.1 250 26-431 14-321 (321)
39 1ylo_A Hypothetical protein SF 99.9 2.1E-20 7.1E-25 182.6 22.8 254 33-432 7-337 (348)
40 1tkj_A Aminopeptidase, SGAP; d 99.8 6.7E-20 2.3E-24 173.7 12.3 148 24-196 2-161 (284)
41 1rtq_A Bacterial leucyl aminop 99.8 4.1E-20 1.4E-24 176.5 10.8 154 26-195 17-179 (299)
42 3tc8_A Leucine aminopeptidase; 99.8 3.9E-18 1.3E-22 162.8 15.1 160 23-196 19-201 (309)
43 3kl9_A PEPA, glutamyl aminopep 99.8 3.4E-17 1.2E-21 159.0 20.8 258 30-432 4-345 (355)
44 3gux_A Putative Zn-dependent e 99.7 1E-17 3.4E-22 160.0 14.7 159 24-196 22-204 (314)
45 2afw_A Glutaminyl-peptide cycl 99.7 4.5E-17 1.6E-21 157.3 11.0 137 26-182 28-190 (329)
46 2vpu_A TET3, 354AA long hypoth 99.6 5E-15 1.7E-19 143.5 19.0 255 30-434 10-350 (354)
47 3isx_A Endoglucanase; TM1050, 99.6 1.4E-13 4.9E-18 132.4 18.9 131 30-177 12-217 (343)
48 4fuu_A Leucine aminopeptidase; 99.6 5.5E-14 1.9E-18 134.5 15.7 158 24-195 20-201 (309)
49 3pb6_X Glutaminyl-peptide cycl 99.5 3E-14 1E-18 136.5 10.3 136 26-182 36-194 (330)
50 4f9u_A CG32412; alpha/beta hyd 99.5 2.4E-13 8.3E-18 130.3 14.1 133 30-183 12-164 (312)
51 4fai_A CG5976, isoform B; alph 99.5 1.8E-13 6.2E-18 131.9 12.7 148 27-196 36-205 (330)
52 1q7l_B Aminoacylase-1; catalys 99.4 3.3E-13 1.1E-17 103.9 9.3 81 353-434 1-81 (88)
53 2ek8_A Aminopeptidase; metallo 99.1 2.7E-10 9.2E-15 113.6 13.4 120 51-196 171-302 (421)
54 3iib_A Peptidase M28; YP_92679 99.1 1.3E-10 4.4E-15 116.5 9.6 109 51-183 203-317 (444)
55 3fed_A Glutamate carboxypeptid 98.7 1.8E-08 6.1E-13 105.5 7.7 82 76-183 311-395 (707)
56 3kas_A Transferrin receptor pr 98.7 3.5E-08 1.2E-12 102.3 9.0 82 76-183 265-350 (640)
57 3k9t_A Putative peptidase; str 96.5 0.014 4.9E-07 56.4 10.5 82 79-195 167-252 (435)
58 3vat_A Dnpep, aspartyl aminope 94.5 0.033 1.1E-06 55.5 5.0 79 352-434 405-489 (496)
59 2glf_A Probable M18-family ami 94.3 0.061 2.1E-06 53.2 6.5 77 351-431 368-450 (450)
60 4eme_A M18 aspartyl aminopepti 94.1 0.049 1.7E-06 54.9 5.4 79 352-434 473-563 (571)
61 1y7e_A Probable M18-family ami 94.0 0.031 1.1E-06 55.5 3.7 74 351-428 377-456 (458)
62 2ijz_A Probable M18-family ami 92.5 0.047 1.6E-06 53.7 2.3 75 352-430 344-424 (428)
63 1tkj_A Aminopeptidase, SGAP; d 91.9 0.71 2.4E-05 42.6 9.6 82 353-435 176-279 (284)
64 2glj_A Probable M18-family ami 91.1 0.094 3.2E-06 52.0 2.6 74 351-428 380-459 (461)
65 3fed_A Glutamate carboxypeptid 89.6 1.2 4.2E-05 46.5 9.6 47 26-72 22-69 (707)
66 3iib_A Peptidase M28; YP_92679 88.8 0.37 1.2E-05 47.7 4.8 62 375-436 370-435 (444)
67 2glj_A Probable M18-family ami 88.8 0.28 9.4E-06 48.7 3.9 46 124-176 253-298 (461)
68 1y7e_A Probable M18-family ami 88.3 0.14 4.8E-06 50.8 1.4 49 123-177 246-294 (458)
69 2glf_A Probable M18-family ami 86.6 0.76 2.6E-05 45.3 5.5 77 26-104 11-97 (450)
70 3h8g_F Cytosol aminopeptidase; 84.6 9 0.00031 37.9 11.9 121 31-171 182-324 (497)
71 3tc8_A Leucine aminopeptidase; 84.4 4.4 0.00015 37.7 9.4 76 355-430 222-308 (309)
72 1rtq_A Bacterial leucyl aminop 83.4 2.4 8.1E-05 39.2 7.1 83 353-435 199-290 (299)
73 2ek8_A Aminopeptidase; metallo 83.1 5.2 0.00018 38.9 9.8 73 360-435 328-403 (421)
74 3pei_A Cytosol aminopeptidase; 82.5 9.6 0.00033 37.6 11.1 121 31-171 166-308 (486)
75 2ijz_A Probable M18-family ami 82.2 0.45 1.5E-05 46.7 1.6 46 125-178 228-273 (428)
76 4efd_A Aminopeptidase; structu 81.1 6.4 0.00022 38.9 9.3 127 30-171 205-347 (522)
77 1gyt_A Cytosol aminopeptidase; 79.9 18 0.0006 36.0 12.1 117 32-171 184-327 (503)
78 3kzw_A Cytosol aminopeptidase; 79.4 14 0.00047 36.6 11.0 111 32-171 200-340 (515)
79 4f9u_A CG32412; alpha/beta hyd 79.2 3.5 0.00012 38.4 6.7 56 378-434 242-300 (312)
80 2hc9_A Leucine aminopeptidase 79.0 23 0.0008 34.9 12.5 120 31-171 169-309 (491)
81 1lam_A Leucine aminopeptidase; 77.9 20 0.00069 35.4 11.8 128 31-172 163-308 (484)
82 3jru_B Probable cytosol aminop 77.1 19 0.00066 35.5 11.3 120 31-171 178-319 (490)
83 3vat_A Dnpep, aspartyl aminope 75.5 3.2 0.00011 41.3 5.3 46 124-172 277-326 (496)
84 3pb6_X Glutaminyl-peptide cycl 73.8 6.5 0.00022 36.9 6.9 55 378-433 272-329 (330)
85 4fai_A CG5976, isoform B; alph 69.0 9.5 0.00032 35.7 6.9 54 379-433 268-324 (330)
86 3gux_A Putative Zn-dependent e 68.0 14 0.00046 34.4 7.6 77 354-430 224-312 (314)
87 3kr4_A M17 leucyl aminopeptida 67.9 38 0.0013 33.5 10.9 119 31-171 207-351 (528)
88 4fuu_A Leucine aminopeptidase; 64.4 27 0.00092 32.2 8.9 77 354-430 222-307 (309)
89 2afw_A Glutaminyl-peptide cycl 62.3 16 0.00055 34.1 7.0 54 379-433 272-328 (329)
90 3k9t_A Putative peptidase; str 58.5 33 0.0011 33.1 8.4 57 376-432 293-354 (435)
91 3ij3_A Cytosol aminopeptidase; 53.3 27 0.00092 34.2 6.9 125 30-171 168-307 (482)
92 2jvf_A De novo protein M7; tet 31.9 76 0.0026 21.9 4.5 64 293-369 15-79 (96)
93 4eme_A M18 aspartyl aminopepti 22.8 1.5E+02 0.0053 29.7 6.8 56 48-103 21-91 (571)
94 3kas_A Transferrin receptor pr 20.8 34 0.0011 35.2 1.6 42 27-68 16-60 (640)
No 1
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.2e-56 Score=447.43 Aligned_cols=377 Identities=18% Similarity=0.205 Sum_probs=311.2
Q ss_pred CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEe------------------cCCccEEEEEEcCC
Q 013641 26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEF------------------VPNKPILLLTWPGS 87 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~------------------~~~~~nvi~~~~g~ 87 (439)
.+.+++++++++|++|||+| ++|.++++||+++|+++|++++.+.. .++.+||+++++|.
T Consensus 23 ~~~~~~~~~l~~l~~~ps~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~ 100 (433)
T 3pfo_A 23 RNFNDQVAFLQRMVQFRSVR--GEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSD 100 (433)
T ss_dssp HHHHHHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCC
T ss_pred hhHHHHHHHHHHHhcCCCCC--CCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecC
Confidence 45688999999999999997 78999999999999999999887642 23578999999874
Q ss_pred CCCCCcEEEeeecccccCCC-CCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEec
Q 013641 88 DPSLPSILFNSHLDSVPAEP-DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVP 166 (439)
Q Consensus 88 ~~~~~~vll~aH~Dtvp~~~-~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~ 166 (439)
. ++|+|+|+|||||||.++ +.|+.+||++.++ ||++||||++|||++++++|.|++.|+ +.+.+++++|.|+|++
T Consensus 101 ~-~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~--~g~~~g~G~~D~k~~~a~~l~a~~~l~-~~~~~~~~~v~~~~~~ 176 (433)
T 3pfo_A 101 G-KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVR--DGWMIGRGAQDMKGGVSAMIFALDAIR-TAGYAPDARVHVQTVT 176 (433)
T ss_dssp C-CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEE--TTEEECTTTTTTHHHHHHHHHHHHHHH-HTTEEESSCEEEEEES
T ss_pred C-CCCEEEEEcccCCcCCCCcccCCCCCCCcEEE--CCEEEecchhhhhHHHHHHHHHHHHHH-HcCCCCCccEEEEEEe
Confidence 4 468999999999999986 6899999999998 999999999999999999999999999 8877788999999999
Q ss_pred CcccCcccCHHHHHhcccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHH
Q 013641 167 DEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVE 245 (439)
Q Consensus 167 ~EE~g~~~G~~~~~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~ 245 (439)
+||.|+ .|++.+++++. ++|++++. +|+. ..++++.+|..+++|+++|+++|++.|+.+ ||+..+++++.
T Consensus 177 ~EE~g~-~G~~~~~~~~~--~~d~~i~~-----ep~~-~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~i~ 247 (433)
T 3pfo_A 177 EEESTG-NGALSTLMRGY--RADACLIP-----EPTG-HTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHLIR 247 (433)
T ss_dssp CTTTTC-HHHHHHHHTTC--CCSEEEEC-----CCCS-SCEEEEECEEEEEEEEEECCCCBGGGGGGSCCHHHHHHHHHH
T ss_pred cCccCC-hhHHHHHhcCC--CCCEEEEe-----CCCC-CceEEecceEEEEEEEEEcCCCccCCCCcCcCHHHHHHHHHH
Confidence 999987 79999987653 36766665 4653 578999999999999999999999999888 99999999999
Q ss_pred HHHccccchhHHH--HhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc
Q 013641 246 MITKFRESQFDVV--KAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA 323 (439)
Q Consensus 246 ~l~~~~~~~~~~~--~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~ 323 (439)
.|+.+........ .+.........+++++.++||. +.|+||++|++.+++|++|.++.+++.++|++.+++.
T Consensus 248 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~~ 321 (433)
T 3pfo_A 248 AFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGD------WASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADA 321 (433)
T ss_dssp HHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECS------CTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccCccccccCCCceEEeeeEECCC------CCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 9987643211100 0000001123589999999997 8999999999999999999999999999999888752
Q ss_pred C--------CCceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHH-hCCCEEE
Q 013641 324 I--------RNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQ-LGIPVLG 394 (439)
Q Consensus 324 ~--------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~-~gip~v~ 394 (439)
. ..+++++.. ...|+. .++.|+++++.+.+++++..+..+.+....+++|+++|.+ .|+|++.
T Consensus 322 ~~~~~~~~~~~~~v~~~~-------~~~p~~-~~~~d~~~~~~~~~a~~~~~G~~~~~~~~~g~~D~~~~~~~~giP~v~ 393 (433)
T 3pfo_A 322 QATDSFLSENPAELVWSG-------FQADPA-VCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALC 393 (433)
T ss_dssp HTTCHHHHHSCCEEEEEE-------EEECCE-ECCTTCHHHHHHHHHHHHHHSSCCCEEEESSCCTHHHHHHTTCCCEEE
T ss_pred hhhCcccccCCeEEEEec-------ccCCcc-cCCCCCHHHHHHHHHHHHHhCCCCceeeeeeeccHHHHHhhCCCCEEE
Confidence 1 124555432 122333 2456789999999999987665434556778999999987 5999999
Q ss_pred EccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhcc
Q 013641 395 FSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSF 434 (439)
Q Consensus 395 ~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~~ 434 (439)
|||+.. .+|++||+++++++.+++++|+.++.++++.
T Consensus 394 ~Gp~~~---~~H~~~E~i~~~~l~~~~~~~~~~i~~~~~~ 430 (433)
T 3pfo_A 394 YGPYGQ---GPHAFDERIDLESLRKTTLSIALFVAEWCGL 430 (433)
T ss_dssp CCCCEE---CTTSTTCEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred ECCCCc---cCCCCCceEEHHHHHHHHHHHHHHHHHHhcc
Confidence 999843 7999999999999999999999999999875
No 2
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=6.8e-55 Score=434.73 Aligned_cols=374 Identities=18% Similarity=0.281 Sum_probs=301.4
Q ss_pred CchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccCC
Q 013641 27 EEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAE 106 (439)
Q Consensus 27 ~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~ 106 (439)
+.+++++++++|++|||+| ++|.++++||+++|+++|++++.... ++.+||++++ |+ ++|+|+|+|||||||.+
T Consensus 4 ~~~~~~~~l~~lv~~ps~s--~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~~nv~a~~-g~--~~~~i~l~~H~D~Vp~~ 77 (393)
T 1vgy_A 4 TETQSLELAKELISRPSVT--PDDRDCQKLMAERLHKIGFAAEEMHF-GNTKNIWLRR-GT--KAPVVCFAGHTDVVPTG 77 (393)
T ss_dssp CCSHHHHHHHHHHTSCCBT--TCCTTHHHHHHHHHHTTTCEEEECCB-TTBCEEEEEE-CS--SSSEEEEEEECCBCCCC
T ss_pred chHHHHHHHHHHhcCCCCC--CCcHHHHHHHHHHHHHcCCcEEEEec-CCCcEEEEEE-CC--CCCEEEEEcccCCcCCC
Confidence 4678999999999999998 67889999999999999998876543 2578999999 64 35899999999999998
Q ss_pred C-CCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccc
Q 013641 107 P-DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEF 185 (439)
Q Consensus 107 ~-~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~ 185 (439)
+ ..|+++||++.++ ||++||||++|||++++++|.|++.|+ +.+.+++++|+|+|+++||.++..|++.+++....
T Consensus 78 ~~~~w~~~Pf~~~~~--~g~l~grG~~D~k~~~aa~l~a~~~l~-~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~ 154 (393)
T 1vgy_A 78 PVEKWDSPPFEPAER--DGRLYGRGAADMKTSIACFVTACERFV-AKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKA 154 (393)
T ss_dssp CGGGSSSCTTSCEEE--TTEEESTTTTTTHHHHHHHHHHHHHHH-HHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHH
T ss_pred CcccCCCCCCceEEE--CCEEEecCcccchHHHHHHHHHHHHHH-HhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHh
Confidence 6 6899999999998 999999999999999999999999999 77778899999999999998644799988865432
Q ss_pred c--ccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccccchhHHHHhcc
Q 013641 186 R--ELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFRESQFDVVKAGR 262 (439)
Q Consensus 186 ~--~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~ 262 (439)
. .+|++++.+.+...+.+ ..+..+.+|..+++|+++|+++|++.|+.+ |||..+++++..|+.+.... .
T Consensus 155 ~~~~~d~~i~~e~~~~~~~g-~~i~~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~-------~ 226 (393)
T 1vgy_A 155 RDELIDYCIVGEPTAVDKLG-DMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDE-------G 226 (393)
T ss_dssp TTCCEEEEEECCCCBSSSTT-SEEECEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCC-------C
T ss_pred cCcCCCEEEEeCCCCcccCC-ceeEEeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccc-------c
Confidence 2 24544444322111111 237788999999999999999999999888 99999999999998753210 0
Q ss_pred ccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCC
Q 013641 263 AANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKG 342 (439)
Q Consensus 263 ~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (439)
......++++++.+++|.. +.|+||++|++++++|+++.++.+++.++|+++++.....+++++.. ..
T Consensus 227 ~~~~~~~~~~v~~i~gG~~-----~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~-------~~ 294 (393)
T 1vgy_A 227 NEYFPPTSFQISNINGGTG-----ATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSC-------SG 294 (393)
T ss_dssp CSSCCCCEEEEEEEEECCS-----CTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEEE-------EE
T ss_pred ccccCCCeEEEeeEcCCCC-----CCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHHhCCCeEEEEec-------CC
Confidence 0011235889999998852 78999999999999999999999999999999887543344444332 23
Q ss_pred CCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHH
Q 013641 343 RPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVE 422 (439)
Q Consensus 343 ~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~ 422 (439)
+|+. . +++++++.+.+++++..+..+.+....+++|++++...++|++.|||+.. .+|++||+++++++.++++
T Consensus 295 ~p~~--~-~~~~l~~~~~~~~~~~~g~~~~~~~~~g~~D~~~~~~~~~P~v~~Gp~~~---~~H~~~E~i~~~~l~~~~~ 368 (393)
T 1vgy_A 295 QPFL--T-QAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKAMAQELIELGPSNA---TIHQINENVRLNDIPKLSA 368 (393)
T ss_dssp CCEE--C-CSSHHHHHHHHHHHHHHSSCCEEECCSCCCTHHHHGGGEEEEEECCSBCT---TTTSTTCEEETTHHHHHHH
T ss_pred Cccc--C-CCcHHHHHHHHHHHHHcCCCceEecCCccchHHHHHhCCCCEEEECCCCC---CCCCCCCceeHHHHHHHHH
Confidence 3433 2 47899999999999986654344456688999999888999999999754 5999999999999999999
Q ss_pred HHHHHHHHhhccc
Q 013641 423 VYESVISSLSSFV 435 (439)
Q Consensus 423 ~~~~~l~~~~~~~ 435 (439)
+|+.++.++++..
T Consensus 369 ~~~~~l~~l~~~~ 381 (393)
T 1vgy_A 369 VYEGILVRLLAGN 381 (393)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHHhccC
Confidence 9999999997653
No 3
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=3.5e-54 Score=427.18 Aligned_cols=371 Identities=22% Similarity=0.310 Sum_probs=295.3
Q ss_pred chhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccCCC
Q 013641 28 EREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEP 107 (439)
Q Consensus 28 ~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~~ 107 (439)
.+++++++++|++|||+| ++|.++++||+++|+++|++++.+.. ++.+|+++++ |. ++|+|+|+||||+||.++
T Consensus 2 ~~~~~~~~~~L~~~ps~s--~~e~~~~~~l~~~l~~~g~~~~~~~~-~~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~ 75 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSIS--PNDEGCQQIIAERLEKLGFQIEWMPF-NDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGD 75 (377)
T ss_dssp HHHHHHHHHHHHTSCCBT--TCCTTHHHHHHHHHHHTTCEEEECCB-TTBCEEEEEE-ES--SSCEEEEEEECCBCCCCC
T ss_pred chHHHHHHHHHhcCCCCC--CChhhHHHHHHHHHHHCCCceEEeec-CCCceEEEEe-CC--CCCEEEEeccccccCCCC
Confidence 367899999999999998 68889999999999999999886543 2578999998 64 358999999999999987
Q ss_pred -CCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccc-
Q 013641 108 -DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEF- 185 (439)
Q Consensus 108 -~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~- 185 (439)
+.|+.+||++.++ ||++||||++|||++++++|.|++.|+ +.+.+++++|.|+|+++||.|+..|++.+++....
T Consensus 76 ~~~w~~~pf~~~~~--~g~~~g~G~~D~k~g~~~~l~a~~~l~-~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~ 152 (377)
T 3isz_A 76 ENQWSSPPFSAEII--DGMLYGRGAADMKGSLAAMIVAAEEYV-KANPNHKGTIALLITSDEEATAKDGTIHVVETLMAR 152 (377)
T ss_dssp GGGCSSCTTSCCEE--TTEEESTTTTTTHHHHHHHHHHHHHHH-HHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHT
T ss_pred cccCCCCCCCcEEE--CCEEEeCChhhhhHHHHHHHHHHHHHH-HhCCCCCceEEEEEEcccccCccccHHHHHHHHHhc
Confidence 6899999999998 999999999999999999999999999 77778899999999999999864599988865322
Q ss_pred -cccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccccchhHHHHhccc
Q 013641 186 -RELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFRESQFDVVKAGRA 263 (439)
Q Consensus 186 -~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 263 (439)
..+|++++.+.....+.+ ..+..+.+|..+++++++|+++|++.|+.+ ||+..+++++.+|+.+.... ..
T Consensus 153 ~~~~d~~~~~e~~~~~~~g-~~i~~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~-------~~ 224 (377)
T 3isz_A 153 DEKITYCMVGEPSSAKNLG-DVVKNGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDK-------GN 224 (377)
T ss_dssp TCCCCEEEECCCCBSSSTT-SEEEEEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCC-------CC
T ss_pred CCCCCEEEEcCCCCcccCC-ceEEEEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccc-------cc
Confidence 135655543321111111 237889999999999999999999999988 99999999999998753210 00
Q ss_pred cCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCC
Q 013641 264 ANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGR 343 (439)
Q Consensus 264 ~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (439)
.....++++++.++||.. +.|+||++|++.+++|+++.++.+++.+++++.+++ .+++++++.. ....
T Consensus 225 ~~~~~~~~~v~~i~gg~~-----~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~--~g~~~~i~~~-----~~~~ 292 (377)
T 3isz_A 225 EFFPPTSLQIANIHAGTG-----SNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK--HNLKYRIEWN-----LSGK 292 (377)
T ss_dssp SSSCCCEEEEEEEEECCS-----CSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH--TTCCEEEEEE-----ECCC
T ss_pred cccCCceeEEEEEECCCC-----CCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH--cCCCeEEEEE-----ecCC
Confidence 011336899999998863 789999999999999999999999999999988875 3444555431 1234
Q ss_pred CccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHH
Q 013641 344 PLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEV 423 (439)
Q Consensus 344 p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~ 423 (439)
|+. .+++++++.+.+++++..+..+.+....+++|++++...|+|++.|||+.. .+|++||+++++++.+++++
T Consensus 293 p~~---~~~~~l~~~l~~a~~~~~g~~~~~~~~~g~tDa~~~~~~g~~~v~~Gp~~~---~~H~~~E~i~~~~l~~~~~i 366 (377)
T 3isz_A 293 PFL---TKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNS---TIHKVNECVSVEDLGKCGEI 366 (377)
T ss_dssp CEE---CCTTHHHHHHHHHHHHHHSCCCEEEECSSCCSHHHHHTTTCEEEECCSBCT---TTTSTTCEEEHHHHHHHHHH
T ss_pred CCc---CCCCHHHHHHHHHHHHHhCCCCeeeccCcccHHHHHHHcCCCEEEECCCCC---cccCCCCcEEHHHHHHHHHH
Confidence 443 346799999999999865554344556788999999989999999999864 69999999999999999999
Q ss_pred HHHHHHHhhc
Q 013641 424 YESVISSLSS 433 (439)
Q Consensus 424 ~~~~l~~~~~ 433 (439)
|+.++.+++.
T Consensus 367 ~~~~i~~ll~ 376 (377)
T 3isz_A 367 YHKMLVNLLD 376 (377)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhh
Confidence 9999998864
No 4
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=3.8e-53 Score=416.40 Aligned_cols=345 Identities=16% Similarity=0.234 Sum_probs=281.9
Q ss_pred CchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccCC
Q 013641 27 EEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAE 106 (439)
Q Consensus 27 ~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~ 106 (439)
..+++++++++|++|||+| ++|.++++|++++|+++|++++.+ .+|++++++|+++++|+|+|+|||||||.+
T Consensus 9 ~~~~~~~~~~~l~~~ps~s--~~e~~~~~~l~~~l~~~g~~~~~~-----~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~ 81 (356)
T 3ct9_A 9 MTAEAVSLLKSLISIPSIS--REETQAADFLQNYIEAEGMQTGRK-----GNNVWCLSPMFDLKKPTILLNSHIDTVKPV 81 (356)
T ss_dssp HHHHHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHHHTTCCEEEE-----TTEEEEECSSCCTTSCEEEEEEECCBCCCC
T ss_pred HHHHHHHHHHHHhcCCCCC--CChHHHHHHHHHHHHHCCCeEEEE-----eeeEEEEEecCCCCCCeEEEEccccccCCC
Confidence 4578999999999999997 788999999999999999998765 679999998733235899999999999998
Q ss_pred CCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCccc-CcccCHHHHHhcccc
Q 013641 107 PDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEI-GGFDGMAKFVESNEF 185 (439)
Q Consensus 107 ~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~-g~~~G~~~~~~~~~~ 185 (439)
+ .|+.+||++.++ ||++||||++|||++++++|.|++.|+ +.+ ++++|.|+|+++||. |+ .|++++++++
T Consensus 82 ~-~w~~~p~~~~~~--~g~~~g~G~~D~k~g~a~~l~a~~~l~-~~~--~~~~v~~~~~~~EE~~g~-~G~~~~~~~~-- 152 (356)
T 3ct9_A 82 N-GWRKDPFTPREE--NGKLYGLGSNDAGASVVSLLQVFLQLC-RTS--QNYNLIYLASCEEEVSGK-EGIESVLPGL-- 152 (356)
T ss_dssp --------CCCEEC--SSEEESTTTTTTHHHHHHHHHHHHHHT-TSC--CSSEEEEEEECCGGGTCT-TTHHHHGGGS--
T ss_pred C-CCCCCCCccEEE--CCEEEecCcccchHHHHHHHHHHHHHH-hcC--CCCCEEEEEEeCcccCCc-cCHHHHHhhC--
Confidence 5 799999999998 999999999999999999999999999 776 789999999999999 75 8999999865
Q ss_pred cccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccccchhHHHHhcccc
Q 013641 186 RELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFRESQFDVVKAGRAA 264 (439)
Q Consensus 186 ~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~ 264 (439)
.++|++++. +|+. ..++++.+|..+++|+++|+++|++.| .+ |||..+++++..|+.+.....+ .
T Consensus 153 ~~~d~~i~~-----ep~~-~~i~~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~-------~ 218 (356)
T 3ct9_A 153 PPVSFAIVG-----EPTE-MQPAIAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKES-------P 218 (356)
T ss_dssp CCCSEEEEC-----CSBT-TCCEEEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCB-------T
T ss_pred CCCCEEEEc-----CCCC-ceEEEeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhccccc-------c
Confidence 246766655 4553 567889999999999999999999999 78 9999999999999876432100 0
Q ss_pred CCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCC
Q 013641 265 NSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRP 344 (439)
Q Consensus 265 ~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p 344 (439)
....++++++.++||. +.|+||++|++++++|+++.++.+++.++|++.++. ++++.. ..+|
T Consensus 219 ~~~~~~~~vg~i~gG~------~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~-----~~~~~~-------~~~~ 280 (356)
T 3ct9_A 219 LLGPVKMSVTVINAGT------QHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC-----DAKARS-------FRLN 280 (356)
T ss_dssp TTBSCEEEEEEEEECS------STTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS-----EEEESC-------SCSC
T ss_pred cCCCCcEEeeEEecCC------cCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC-----eEEEee-------ccCC
Confidence 1123689999999987 999999999999999999999999999999988863 444441 1233
Q ss_pred ccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHH
Q 013641 345 LMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVY 424 (439)
Q Consensus 345 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~ 424 (439)
+. .+++++++++.+.+++++ +....+++|++ ..++|++.|||+... .+|++||+++++++.+++++|
T Consensus 281 ~~-~~~~~~~l~~~~~~~~~~-------~~~~~g~tD~~---~~~~p~v~~G~g~~~--~~H~~~E~i~~~~l~~~~~~~ 347 (356)
T 3ct9_A 281 SS-RIDEKHPFVQKAVKMGRI-------PFGSPTLSDQA---LMSFASVKIGPGRSS--RSHTAEEYIMLKEIEEAIGIY 347 (356)
T ss_dssp CE-ECCTTSHHHHHHHHTTCC-------CEEECSCCGGG---GCCSCEEECCSSBGG--GTTSTTCEEEHHHHHHHHHHH
T ss_pred CC-CCCCCCHHHHHHHHHhcC-------Ccccccccchh---hcCCCEEEECCCccc--cCcCCCcEEEHHHHHHHHHHH
Confidence 33 245678999988876542 33467899988 358999999998532 699999999999999999999
Q ss_pred HHHHHHhh
Q 013641 425 ESVISSLS 432 (439)
Q Consensus 425 ~~~l~~~~ 432 (439)
+.++.+++
T Consensus 348 ~~~~~~~~ 355 (356)
T 3ct9_A 348 LDLLDGLK 355 (356)
T ss_dssp HHHHTTCC
T ss_pred HHHHHHhh
Confidence 99987653
No 5
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=4.3e-53 Score=418.21 Aligned_cols=354 Identities=21% Similarity=0.235 Sum_probs=286.7
Q ss_pred CCchhHHHHHHhHhcCcCCCCCC---CCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeeccc
Q 013641 26 HEEREPITRFKQYLRFNTAHPNP---NYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDS 102 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~---~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dt 102 (439)
.+.+++++++++|++|||+|+++ +|.++++||+++|+ |++++.+...++++|+++ ++|+ |+|+|++||||
T Consensus 6 ~~~~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~----~~i~l~~H~D~ 78 (369)
T 2f7v_A 6 DLLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT----PKYLFNVHLDT 78 (369)
T ss_dssp HHHHHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC----CSEEEEEECCB
T ss_pred hhhHHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC----CeEEEEeeecc
Confidence 45688999999999999998555 89999999999999 999887765445789999 9763 78999999999
Q ss_pred ccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCccc-CcccCHHHHHh
Q 013641 103 VPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEI-GGFDGMAKFVE 181 (439)
Q Consensus 103 vp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~-g~~~G~~~~~~ 181 (439)
||.++ .|+.+||++.++ ||++||||++|||++++++|.+++. ++++|.|+|+++||. |+ .|++++++
T Consensus 79 vp~~~-~w~~~pf~~~~~--~g~l~grG~~D~k~g~a~~l~a~~~--------~~~~v~~~~~~~EE~~g~-~G~~~~~~ 146 (369)
T 2f7v_A 79 VPDSP-HWSADPHVMRRT--EDRVIGLGVCDIKGAAAALVAAANA--------GDGDAAFLFSSDEEANDP-RCIAAFLA 146 (369)
T ss_dssp CCCCS-SCSSCTTSCEEC--SSEEECTTTTTTHHHHHHHHHHHTT--------CCCCEEEEEESCTTSSSC-CHHHHHHT
T ss_pred cCCCC-CCCCCCCCcEEE--CCEEEecccccccHHHHHHHHHHhc--------CCCCEEEEEEeCcccCCC-cCHHHHHh
Confidence 99985 799999999998 9999999999999999999998654 568999999999999 65 89999998
Q ss_pred cccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCC-CC-cHHHHHHHHHHHHHccccchhHHHH
Q 013641 182 SNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMF-DN-GAMENLMKSVEMITKFRESQFDVVK 259 (439)
Q Consensus 182 ~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~ 259 (439)
++. ..|+++++ +|+. ..++++.+|..+++|+++|+++|++.|+ .+ |||..+++++..|+.+... ..
T Consensus 147 ~~~--~~d~~i~~-----e~~~-~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~----~~ 214 (369)
T 2f7v_A 147 RGL--PYDAVLVA-----EPTM-SEAVLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVES----LA 214 (369)
T ss_dssp TCC--CCSEEEEC-----CCST-TCBBCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHH----TT
T ss_pred cCC--CCCEEEEC-----CCCC-CcceeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhh----hc
Confidence 754 46766665 3553 5788899999999999999999999998 77 9999999999999765321 10
Q ss_pred hc--cccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeecccc
Q 013641 260 AG--RAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPI 337 (439)
Q Consensus 260 ~~--~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 337 (439)
.. ....+ ++++++.++||. +.|+||++|++++++|+++.++.+++.++|++.++.. +++++++..
T Consensus 215 ~~~~~~~~~--~~~~vg~i~gG~------~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~--- 281 (369)
T 2f7v_A 215 HARFGGLTG--LRFNIGRVDGGI------KANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPA--AAHFEETFR--- 281 (369)
T ss_dssp TCEETTEES--CEEEEEEEEECS------STTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSC--CSEEEEEEE---
T ss_pred ccccCcccC--CceEEEEeecCC------CCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHHh--cCceEEEec---
Confidence 00 00011 689999999987 8999999999999999999999999999999888643 355665531
Q ss_pred ccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhH
Q 013641 338 RDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVF 417 (439)
Q Consensus 338 ~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l 417 (439)
...+|++. .+. +++++.+.+++++..+..+. ....+++|+++|.+.|+|++.|||+.. ..+|++||+++++++
T Consensus 282 --~~~~~~~~-~~~-~~l~~~~~~a~~~~~g~~~~-~~~~g~~D~~~~~~~g~p~v~~Gpg~~--~~~H~~~E~~~~~~l 354 (369)
T 2f7v_A 282 --GPSLPSGD-IAR-AEERRLAARDVADALDLPIG-NAVDFWTEASLFSAGGYTALVYGPGDI--AQAHTADEFVTLAQL 354 (369)
T ss_dssp --ECCBSCSS-HHH-HHHHHHHHHHHHHHTTCCBC-CCBSSCCTHHHHHHTTCCEEECCSSCG--GGTTCTTCEEEHHHH
T ss_pred --cCCCCccC-CCC-CHHHHHHHHHHHHhhCCCCC-ccccccCcHHHHhhCCCCEEEECCCCc--cccCCCCceEEHHHH
Confidence 01334432 233 78999999999988765423 346789999999988999999999753 379999999999999
Q ss_pred HHHHHHHHHHHHH
Q 013641 418 LKGVEVYESVISS 430 (439)
Q Consensus 418 ~~~~~~~~~~l~~ 430 (439)
.+++++|+.++.+
T Consensus 355 ~~~~~~~~~~~~~ 367 (369)
T 2f7v_A 355 QRYVESVNRIING 367 (369)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998864
No 6
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.7e-52 Score=425.12 Aligned_cols=385 Identities=15% Similarity=0.147 Sum_probs=303.3
Q ss_pred hhHHHHHHhHhcCcCCCCC--------CCCchHHHHHHHHHHhcCCc---eEEEEecCCccEEEEEEcCCCCCCCcEEEe
Q 013641 29 REPITRFKQYLRFNTAHPN--------PNYTAPVSFLISQAQSIGLQ---FKTLEFVPNKPILLLTWPGSDPSLPSILFN 97 (439)
Q Consensus 29 ~~~i~~l~~lv~ips~s~~--------~~e~~~~~~l~~~l~~~G~~---~~~~~~~~~~~nvi~~~~g~~~~~~~vll~ 97 (439)
++++++|++|++|||+|+. ++|.++++|++++|+++|++ ++.++..++++||+++++| . ++++|+|+
T Consensus 18 ~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~g-~-~~~~i~l~ 95 (472)
T 3pfe_A 18 EEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPG-Q-IDDTVLLY 95 (472)
T ss_dssp HTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEECC-S-EEEEEEEE
T ss_pred HHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEcC-C-CCCeEEEE
Confidence 7899999999999999843 23789999999999999995 5545443346899999987 3 45899999
Q ss_pred eecccccCCCCCCC--CCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccC
Q 013641 98 SHLDSVPAEPDKWS--HPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDG 175 (439)
Q Consensus 98 aH~Dtvp~~~~~w~--~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G 175 (439)
|||||||+. +.|+ .+||++.++ ||++||||++|||++++++|.|+++|+ +.+.++. +|.|+|+++||.|+ .|
T Consensus 96 ~H~D~vp~~-~~w~~~~~Pf~~~~~--~g~~~grG~~D~K~~~a~~l~a~~~l~-~~~~~~~-~v~~~~~~~EE~g~-~g 169 (472)
T 3pfe_A 96 GHLDKQPEM-SGWSDDLHPWKPVLK--NGLLYGRGGADDGYSAYASLTAIRALE-QQGLPYP-RCILIIEACEESGS-YD 169 (472)
T ss_dssp EECCBCCCC-SCCCTTCBTTBCEEE--TTEEESTTCCCCCHHHHHHHHHHHHHH-HTTCCCE-EEEEEEESCGGGTS-TT
T ss_pred ccccCCCCc-CCCCcCCCCCceEEE--CCEEEEeCcccCcHHHHHHHHHHHHHH-HcCCCCC-cEEEEEEeCCCCCC-hh
Confidence 999999997 6899 999999998 999999999999999999999999999 8887666 99999999999997 89
Q ss_pred HHHHHhcc--cccccceEEEEecCCcCCCCcceEEeeccceEEEEEEE--eeCCCCcCCCCCC--cHHHHHHHHHHHHHc
Q 013641 176 MAKFVESN--EFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRA--KGAPGHGSRMFDN--GAMENLMKSVEMITK 249 (439)
Q Consensus 176 ~~~~~~~~--~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v--~G~~~Hs~~p~~g--nai~~~~~~i~~l~~ 249 (439)
++.+++++ .++++|++++++.+...++ .+.+.++.+|..+++++| +|+++|++.|... |||..+++++++|++
T Consensus 170 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~i~~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~ 248 (472)
T 3pfe_A 170 LPFYIELLKERIGKPSLVICLDSGAGNYE-QLWMTTSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVARQLISRIED 248 (472)
T ss_dssp HHHHHHHHHHHHCCCSEEEEECCBCSCSS-SCEEEEEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHHHHHHHHHHBC
T ss_pred HHHHHHHhHhhccCCCEEEEeCCCcCCCC-CeeEEEeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHHHHHHHHHhhC
Confidence 99999875 3446788888875543333 578999999998877555 8999999998754 999999999999988
Q ss_pred cccc------hhH---H-----H-------Hh----------ccccCC-----------CceEeeEeEEeecccCCCCcc
Q 013641 250 FRES------QFD---V-----V-------KA----------GRAANS-----------EVISVNLVYLKAGIPSPTGFV 287 (439)
Q Consensus 250 ~~~~------~~~---~-----~-------~~----------~~~~~~-----------~~~t~~~~~i~gg~~~~~g~~ 287 (439)
+... .++ . . .. +..... +.+|++++.|+||.. +|.+
T Consensus 249 ~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~gG~~--~g~a 326 (472)
T 3pfe_A 249 ENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPA--IADA 326 (472)
T ss_dssp TTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEESCCC--TTTC
T ss_pred cCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeecCcC--CCCC
Confidence 7210 000 0 0 00 000000 047999999998731 2338
Q ss_pred cccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc-CCCceEEEeeccccccCC-CCCccccCCCCCh-HHHHHHHHHH
Q 013641 288 MNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA-IRNMSYEIIEKGPIRDYK-GRPLMTLTDDSNP-WWSVFKRAVT 364 (439)
Q Consensus 288 ~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~-~~~~l~~a~~ 364 (439)
.|+||++|++++++|+.+.++.+++.++|+++++.. ..+++++++.. . .+|++. .+.|++ +++.+.++++
T Consensus 327 ~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~g~~v~v~~~------~~~~pp~~-~~~n~~~l~~~~~~a~~ 399 (472)
T 3pfe_A 327 GNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNPPYNAKVDFKIQ------NGGSKGWN-APLLSDWLAKAASEASM 399 (472)
T ss_dssp CSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSCGGGCEEEEEEC------SCCBCCEE-CCCCCHHHHHHHHHHHH
T ss_pred CCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhCCCCeEEEEEec------CCCCCccc-CCCCChHHHHHHHHHHH
Confidence 999999999999999999999999999999988753 24667777652 3 344432 445666 7799999999
Q ss_pred HhCCCCCccccccCCcc-H-HHHHH-h-CCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhc
Q 013641 365 SAGGKLGKPEILASTTD-A-RYMRQ-L-GIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 365 ~~~~~~~~~~~~~~~tD-~-~~~~~-~-gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
+..+..+. ....+++| + ++|.+ . |+|++.+|++... ...|+|||+++++++.+++++|+.++.++++
T Consensus 400 ~~~G~~~~-~~~~gg~d~f~~~~~~~~Pg~p~v~~G~g~~~-~~~H~p~E~i~~~~l~~g~~~l~~~l~~la~ 470 (472)
T 3pfe_A 400 TYYDKPAA-YMGEGGTIPFMSMLGEQFPKAQFMITGVLGPH-SNAHGPNEFLHLDMVKKLTSCVSYVLYSFSQ 470 (472)
T ss_dssp HHHSSCCE-EEEESSCCHHHHHHHHHCTTCEEEEECCBCTT-CCTTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCce-eccCCCchhhHHHHHHHcCCCCEEEecCCCCC-CCCcCCCcceeHHHHHHHHHHHHHHHHHHhh
Confidence 87665422 23457778 3 66765 3 7888889976432 3799999999999999999999999998864
No 7
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=6.5e-53 Score=420.42 Aligned_cols=367 Identities=17% Similarity=0.199 Sum_probs=300.6
Q ss_pred CCchhHHHHHHhHhcCcCCCCCC-CCchHHHHHHHHHHhcCCceEEEEec--CCccEEEEEEcCCCCCCCcEEEeeeccc
Q 013641 26 HEEREPITRFKQYLRFNTAHPNP-NYTAPVSFLISQAQSIGLQFKTLEFV--PNKPILLLTWPGSDPSLPSILFNSHLDS 102 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~-~e~~~~~~l~~~l~~~G~~~~~~~~~--~~~~nvi~~~~g~~~~~~~vll~aH~Dt 102 (439)
.+.++++++|++|++|||+|... ++.++++||+++|+++|++++.+... ...+||+++++|++ +|+|+|+|||||
T Consensus 16 ~~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~--~~~i~l~aH~D~ 93 (393)
T 1cg2_A 16 DEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG--GKNLLLMSHMDT 93 (393)
T ss_dssp HHHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS--CCCEEEEEECCB
T ss_pred hhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC--CceEEEEEecCc
Confidence 35688999999999999998321 24789999999999999998877642 12469999998653 489999999999
Q ss_pred ccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhc
Q 013641 103 VPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVES 182 (439)
Q Consensus 103 vp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~ 182 (439)
||+.+ .|...||. ++ ||++||||++|||++++++|.|++.|+ +.+.+++++|.|+|+++||.|+ .|++.++++
T Consensus 94 vp~~~-~~~~~Pf~--~~--~g~l~grG~~D~k~~~a~~l~a~~~l~-~~~~~~~~~v~~~~~~~EE~g~-~G~~~~~~~ 166 (393)
T 1cg2_A 94 VYLKG-ILAKAPFR--VE--GDKAYGPGIADDKGGNAVILHTLKLLK-EYGVRDYGTITVLFNTDEEKGS-FGSRDLIQE 166 (393)
T ss_dssp SCCTT-HHHHSCCE--EE--TTEEECTTTTTTHHHHHHHHHHHHHHH-HTTCCCSSEEEEEEESCGGGTT-TTTHHHHHH
T ss_pred CCCCC-ccccCCee--ee--CCEEEcCCcccchHHHHHHHHHHHHHH-hcCCCCCCCEEEEEEcccccCC-ccHHHHHHH
Confidence 99863 57777998 56 999999999999999999999999999 8887788899999999999987 899999986
Q ss_pred ccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcC-CCCCC-cHHHHHHHHHHHHHccccchhHHHHh
Q 013641 183 NEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGS-RMFDN-GAMENLMKSVEMITKFRESQFDVVKA 260 (439)
Q Consensus 183 ~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~ 260 (439)
+.. ++|++++++.+. .+ ...++.+.+|..+++|+++|+++|+| .|+.| |||..+++++..|+.+....
T Consensus 167 ~~~-~~d~~i~~e~~~-~~--~~~i~~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~~~------ 236 (393)
T 1cg2_A 167 EAK-LADYVLSFEPTS-AG--DEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDKA------ 236 (393)
T ss_dssp HHH-HCSEEEECCCEE-TT--SCEEESEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCBTT------
T ss_pred Hhh-cCCEEEEeCCCC-CC--CCcEEEeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhCcc------
Confidence 433 467777764321 01 34788999999999999999999997 68888 99999999999998764311
Q ss_pred ccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc-CCCceEEEeecccccc
Q 013641 261 GRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA-IRNMSYEIIEKGPIRD 339 (439)
Q Consensus 261 ~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~ 339 (439)
..++++++.++||. +.|+||++|++++++|+++.++.+++.++|++.++.. ..+++++++..
T Consensus 237 ------~~~~~~v~~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~----- 299 (393)
T 1cg2_A 237 ------KNLRFNWTIAKAGN------VSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQKKLPEADVKVIVT----- 299 (393)
T ss_dssp ------TTEEEEEEEEEECS------STTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTSCSSTTCEEEEEEE-----
T ss_pred ------cCceEEEEEEeCCC------CCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhcccCCCcEEEEEec-----
Confidence 23689999999997 9999999999999999999999999999999988742 35666766642
Q ss_pred CCCCCccccCCCCChHHHHHHHHHHHhCCCCCcccc-ccCCccHHHHHHhCCCEE-EEccCCCCCCCCCC-CCCccchHh
Q 013641 340 YKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEI-LASTTDARYMRQLGIPVL-GFSPMANTPILLHD-HNEFLKDTV 416 (439)
Q Consensus 340 ~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~-~~~~tD~~~~~~~gip~v-~~Gp~~~~~~~~H~-~nE~i~~~~ 416 (439)
..+|++.....++++++.+.+++++.+ ..+.+.. ..+++|++++...|+|++ .|||+.. .+|+ +||++++++
T Consensus 300 -~~~~~~~~~~~~~~l~~~~~~~~~~~g-~~~~~~~~~~g~tD~~~~~~~giP~~~~~G~~~~---~~H~~~~E~i~~~~ 374 (393)
T 1cg2_A 300 -RGRPAFNAGEGGKKLVDKAVAYYKEAG-GTLGVEERTGGGTDAAYAALSGKPVIESLGLPGF---GYHSDKAEYVDISA 374 (393)
T ss_dssp -ECSCCEECHHHHHHHHHHHHHHHHHTT-CCCEEESCBSCCCTHHHHGGGSCCEECCCSCEEE---CTTSSSCCEEEGGG
T ss_pred -cccCCccCCcchHHHHHHHHHHHHHhC-CCCccccCCCcccHHHHHHhCCCCEEEeCCCCCC---CccCCCcceEEehh
Confidence 234444211124789999999998754 3334445 678999999998899998 5888642 6999 999999999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 013641 417 FLKGVEVYESVISSLSS 433 (439)
Q Consensus 417 l~~~~~~~~~~l~~~~~ 433 (439)
+.+++++|+.++..+++
T Consensus 375 l~~~~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 375 IPRRLYMAARLIMDLGA 391 (393)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999875
No 8
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=1e-51 Score=422.29 Aligned_cols=387 Identities=15% Similarity=0.173 Sum_probs=301.7
Q ss_pred Cch-hHHHHHHhHhcCcCCCCC-CCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeeccccc
Q 013641 27 EER-EPITRFKQYLRFNTAHPN-PNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP 104 (439)
Q Consensus 27 ~~~-~~i~~l~~lv~ips~s~~-~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp 104 (439)
+.+ ++++++++|++|||+|.. .++.++++||+++|+++|++++.++. .+.+||+++++|.++++|+|+|+|||||||
T Consensus 41 ~~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~-~~~~~v~a~~~g~~~~~~~i~l~aH~D~vp 119 (481)
T 2pok_A 41 HVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDES-YTAPFVMAHFKSSRPDAKTLIFYNHYDTVP 119 (481)
T ss_dssp HHHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECS-SSSCEEEEEECCSSTTCCEEEEEEECCCCC
T ss_pred hhhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecC-CCCcEEEEEecCCCCCCCeEEEEEeccCcC
Confidence 456 899999999999999842 23489999999999999998877642 257899999986533468999999999999
Q ss_pred CCC-CCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcc
Q 013641 105 AEP-DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESN 183 (439)
Q Consensus 105 ~~~-~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 183 (439)
.++ +.|+.+||++.++ ||++||||++|||++++++|.|++.|+ +.+..++++|.|+|+++||.|+ .|++.+++++
T Consensus 120 ~~~~~~w~~~pf~~~~~--~g~l~grG~~D~k~g~a~~l~a~~~l~-~~~~~~~~~v~~~~~~~EE~g~-~g~~~~~~~~ 195 (481)
T 2pok_A 120 ADGDQVWTEDPFTLSVR--NGFMYGRGVDDDKGHITARLSALRKYM-QHHDDLPVNISFIMEGAEESAS-TDLDKYLEKH 195 (481)
T ss_dssp SCSSCCCSSCTTSCEEE--TTEEESTTTTTTHHHHHHHHHHHHHHH-HTCSSCSSEEEEEEESCGGGTT-TTHHHHHHHH
T ss_pred CCCccccccCCCCceee--CCeEEccccccCcHHHHHHHHHHHHHH-HhcCCCCCCEEEEEecccccCc-hhHHHHHHHh
Confidence 986 5899999999999 999999999999999999999999999 7755788999999999999997 8999888764
Q ss_pred --cccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCC--CCcCCCCCC-cHHHHHHHHHHHHHcccc------
Q 013641 184 --EFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAP--GHGSRMFDN-GAMENLMKSVEMITKFRE------ 252 (439)
Q Consensus 184 --~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~--~Hs~~p~~g-nai~~~~~~i~~l~~~~~------ 252 (439)
.++++|++++.+.+.. ..+.+.++++.+|..+++|+++|++ +|++.|..+ |||..+++++..|+++..
T Consensus 196 ~~~~~~~d~~i~~~~~~~-~~~~~~i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g 274 (481)
T 2pok_A 196 ADKLRGADLLVWEQGTKN-ALEQLEISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEG 274 (481)
T ss_dssp HHHHTTCSEEECSCCBBC-TTSCEEEECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTT
T ss_pred HhhccCCCEEEECCCCcc-CCCCeeEEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccc
Confidence 2433665555542211 1113478889999999999999999 899889887 999999999999876530
Q ss_pred -------------chhHHH--------Hhcc---ccC------------CCceEeeEeEEeecccCCCCcccccccCceE
Q 013641 253 -------------SQFDVV--------KAGR---AAN------------SEVISVNLVYLKAGIPSPTGFVMNMQPSEAE 296 (439)
Q Consensus 253 -------------~~~~~~--------~~~~---~~~------------~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~ 296 (439)
..+... .... ... ...+|++++.|+||.. +..+.|+||++|+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~--~~~~~NvIP~~a~ 352 (481)
T 2pok_A 275 LYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQ--GQGVKTILPAEAS 352 (481)
T ss_dssp TGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECC--SSSCCCEECSEEE
T ss_pred hhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCC--CCCCCeeccCeeE
Confidence 000000 0000 000 0236899999999852 1126799999999
Q ss_pred EEEeeecCCCCCHHHHHHHHHHHhccc-CCCceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCcccc
Q 013641 297 AGFDARLPPTVDPDLIRRRIAEEWAPA-IRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEI 375 (439)
Q Consensus 297 ~~~~iR~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 375 (439)
+++++|++|.++.+++.++|+++++.. ..++++++.. .+.|+. ++.|+++++.+.+++++..+..+....
T Consensus 353 ~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~v~~~~-------~~p~~~--~~~d~~l~~~~~~a~~~~~g~~~~~~~ 423 (481)
T 2pok_A 353 AKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELYYTL-------GEMSYR--SDMSAPAILNVIELAKKFYPQGVSVLP 423 (481)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHTTCTTEEEEEEE-------EECCBC--CCSCSHHHHHHHHHHTTTCTTCEEEES
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHhhCCCceEEEEcc-------CCCccc--CCCCCHHHHHHHHHHHHHcCCCccccc
Confidence 999999999999999999999988743 2456666553 233332 456899999999999987665421223
Q ss_pred ccCCc-cHHHHHH-hCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHh
Q 013641 376 LASTT-DARYMRQ-LGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSL 431 (439)
Q Consensus 376 ~~~~t-D~~~~~~-~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~ 431 (439)
..+++ |+++|.+ .|+|++.|||+.. ...+|++||+++++++.+++++|++++..+
T Consensus 424 ~~gg~~D~~~~~~~~g~p~v~~G~g~~-~~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 424 TTAGTGPMHTVFDALEVPMVAFGLGNA-NSRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp CBSSCCTHHHHHHHHCCCEEBCCSBCT-TCCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCchHHHHHHcCCCEEEecCCCc-ccCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 34555 9887754 6999999999862 137999999999999999999999998764
No 9
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-51 Score=410.37 Aligned_cols=364 Identities=15% Similarity=0.179 Sum_probs=298.6
Q ss_pred CCCCCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEe----cCCccEEEEEEcCC--CCCCCcEEE
Q 013641 23 GKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEF----VPNKPILLLTWPGS--DPSLPSILF 96 (439)
Q Consensus 23 ~~~~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~----~~~~~nvi~~~~g~--~~~~~~vll 96 (439)
+...+.+++++++++|++|||+| ++|.++++||+++|+++|++++.+.. ..+.+||+++++|+ .+++|+|+|
T Consensus 18 ~~~~~~~~~~~~l~~L~~ips~s--~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l 95 (396)
T 3rza_A 18 QGMINEQRLLNTFLELVQIDSET--GNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYL 95 (396)
T ss_dssp -CCSCHHHHHHHHHHHHTSCCBT--TCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEE
T ss_pred EEeecHHHHHHHHHHHeecCCCC--cCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEE
Confidence 34568899999999999999997 78999999999999999999876542 12368999999875 134699999
Q ss_pred eeecccccCCCCCCCCCCCceeEeCCC-CEEEecCc----ccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccC
Q 013641 97 NSHLDSVPAEPDKWSHPPFSAFHSPET-GQIFARGS----QDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIG 171 (439)
Q Consensus 97 ~aH~Dtvp~~~~~w~~~Pf~~~~~~~d-g~i~GrG~----~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g 171 (439)
+|||||||+++ .| .+..+ + |++||||+ +|||++++++|.|++.|+ +.+. ++++|.|+|+++||.|
T Consensus 96 ~aH~D~vp~g~-~~-----~p~~~--~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~-~~~~-~~~~v~~~~~~~EE~g 165 (396)
T 3rza_A 96 TSHMDTVVPAI-NV-----KPIVK--DDGYIYSDGTTILGADDKAGLAAMLEVLQVIK-EQQI-PHGQIQFVITVGEESG 165 (396)
T ss_dssp EEECCBCSSCS-SC-----CCEEC--TTSEEECCSSSCCCHHHHHHHHHHHHHHHHHH-HHTC-CCCCEEEEEESCGGGT
T ss_pred EEECCccCCCC-Cc-----ceEEe--cCCEEECCCccccCcccHHHHHHHHHHHHHHH-hcCC-CCCCEEEEEEcccccc
Confidence 99999999874 34 44555 5 99999999 699999999999999999 7774 6799999999999998
Q ss_pred cccCHHHHHhcccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHcc
Q 013641 172 GFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKF 250 (439)
Q Consensus 172 ~~~G~~~~~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~ 250 (439)
+ .|++.+.+++ + ..+++++++.+. + ...++++.+|..+++|+++|+++|+|.|+.+ ||+..+++++..|+..
T Consensus 166 ~-~Ga~~~~~~~-~-~~~~~~~~~~~~--~--~g~i~~~~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~ 238 (396)
T 3rza_A 166 L-IGAKELNSEL-L-DADFGYAIDASA--D--VGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLG 238 (396)
T ss_dssp S-HHHHHCCGGG-C-CCSEEEEEEESS--C--TTCEEEEECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCE
T ss_pred c-HhHhhhchhh-c-ccceEEEEecCC--C--cceEEEcCCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccC
Confidence 6 8998886543 3 256778876432 2 2478889999999999999999999999988 9999999999998653
Q ss_pred ccchhHHHHhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc--CCCce
Q 013641 251 RESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA--IRNMS 328 (439)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~--~~~~~ 328 (439)
.. ....+++++.+++|. +.|+||++|++.+++|+.+.++.+++.++|++.++.. ..+++
T Consensus 239 ~~-------------~~~~~~~vg~i~gG~------~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~ 299 (396)
T 3rza_A 239 QV-------------DEITTANIGKFHGGS------ATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGK 299 (396)
T ss_dssp EE-------------ETTEEEEEEEEEECS------CTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CC-------------CCCceeeeeEEecCC------CCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 11 123688999999987 9999999999999999999999999999999887642 35566
Q ss_pred EEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCC
Q 013641 329 YEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDH 408 (439)
Q Consensus 329 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~ 408 (439)
++++.. ..+|++ .+++|+++++.+.+++++.+.. +.+....+++|+++|.+.|+|++.|||+.. .+|++
T Consensus 300 ~~i~~~------~~~p~~-~~~~d~~l~~~~~~~~~~~g~~-~~~~~~~g~tD~~~~~~~giP~~~~g~g~~---~~H~~ 368 (396)
T 3rza_A 300 AEVTVE------QSYPGF-KINDNEAVVKIAQESARNLGLS-ANTIISGGGSDGSIINTFGIPSVILGVGYE---KIHTT 368 (396)
T ss_dssp EEEEEE------EEECCE-ECCTTSHHHHHHHHHHHHTTCC-CCEEECSSCCHHHHHGGGTCCEEEEECCCB---STTST
T ss_pred EEEEEE------eccCCc-ccCCCcHHHHHHHHHHHHcCCC-ceecccceeccHHHHhhCCCcEEEECCCCC---CCCCC
Confidence 665542 233443 2456789999999999987433 244556789999999888999999999864 69999
Q ss_pred CCccchHhHHHHHHHHHHHHHHhhccc
Q 013641 409 NEFLKDTVFLKGVEVYESVISSLSSFV 435 (439)
Q Consensus 409 nE~i~~~~l~~~~~~~~~~l~~~~~~~ 435 (439)
||+++++++.+++++|+.++.++++.+
T Consensus 369 ~E~v~~~~l~~~~~~~~~~~~~l~~~~ 395 (396)
T 3rza_A 369 NERMPIKSLNLLASQVLEIIKIVARQS 395 (396)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cceeEHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999987643
No 10
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=1.9e-51 Score=407.15 Aligned_cols=357 Identities=18% Similarity=0.179 Sum_probs=296.9
Q ss_pred CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEe----cCCccEEEEEEcCCCCCCCcEEEeeecc
Q 013641 26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEF----VPNKPILLLTWPGSDPSLPSILFNSHLD 101 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~----~~~~~nvi~~~~g~~~~~~~vll~aH~D 101 (439)
.+.++++++|++|++|||+| ++|.++++||+++|+++|++++.+.. ..+++||+++++|+++++|+|+|+||||
T Consensus 3 ~~~~~~~~~l~~l~~~ps~s--~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D 80 (373)
T 3gb0_A 3 INQERLVNEFMELVQVDSET--KFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMD 80 (373)
T ss_dssp SCHHHHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECC
T ss_pred CCHHHHHHHHHHHhcccCCC--ccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECc
Confidence 46789999999999999997 78999999999999999999876642 1246899999988633469999999999
Q ss_pred cccCCCCCCCCCCCceeEeCCCCEEEecCc----ccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHH
Q 013641 102 SVPAEPDKWSHPPFSAFHSPETGQIFARGS----QDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMA 177 (439)
Q Consensus 102 tvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~----~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 177 (439)
+||+++ +|.+.++ ||++||||+ +|||++++++|.+++.|+ +.+. ++++|.|+|+++||.|+ .|++
T Consensus 81 ~vp~~~------~~~p~~~--~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~-~~~~-~~~~v~~~~~~~EE~g~-~Ga~ 149 (373)
T 3gb0_A 81 TVVPGN------GIKPSIK--DGYIVSDGTTILGADDKAGLASMFEAIRVLK-EKNI-PHGTIEFIITVGEESGL-VGAK 149 (373)
T ss_dssp BCSSCS------SCCCEEE--TTEEECCSSSCCCHHHHHHHHHHHHHHHHHH-HTTC-CCCCEEEEEESCGGGTS-HHHH
T ss_pred ccCCCC------CcCcEEE--CCEEECCCccccCcccHHHHHHHHHHHHHHH-hcCC-CCCCEEEEEEeccccCc-hhhh
Confidence 999874 4555777 999999999 699999999999999999 8775 68999999999999986 7998
Q ss_pred HHHhcccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcC-CCCCC-cHHHHHHHHHHHHHccccchh
Q 013641 178 KFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGS-RMFDN-GAMENLMKSVEMITKFRESQF 255 (439)
Q Consensus 178 ~~~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~ 255 (439)
.+.++. + ..+++++++.+. + ...+.++.+|..+++|+++|+++|++ .|+.| ||+..+++++..|+....
T Consensus 150 ~~~~~~-~-~~~~~~~~~~~~--~--~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~~~--- 220 (373)
T 3gb0_A 150 ALDRER-I-TAKYGYALDSDG--K--VGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGRI--- 220 (373)
T ss_dssp HSCGGG-C-CCSEEEEEEECS--C--TTEEEEEECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCEEE---
T ss_pred hhCHHh-c-CCCEEEEEcCCC--C--CCeEEEcCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccccC---
Confidence 886543 3 357778876432 2 24788899999999999999999999 79998 999999999998864210
Q ss_pred HHHHhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc--CCCceEEEee
Q 013641 256 DVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA--IRNMSYEIIE 333 (439)
Q Consensus 256 ~~~~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~ 333 (439)
....+++++.++||. +.|+||++|++.+++|+.+.++.+++.++|++.++.. ..+++++++.
T Consensus 221 ----------~~~~~~~vg~i~gG~------~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~~ 284 (373)
T 3gb0_A 221 ----------DSETTANIGRFEGGT------QTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEV 284 (373)
T ss_dssp ----------ETTEEEEEEEEEECS------CTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----------CCccccceeEEecCc------ccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 123678999999987 9999999999999999999999999999999887642 3556666654
Q ss_pred ccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccc
Q 013641 334 KGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLK 413 (439)
Q Consensus 334 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~ 413 (439)
. ..+|+. .+++|+++++.+.+++++.+.. +.+....+++|+++|.+.|+|++.|||+.. .+|++||+++
T Consensus 285 ~------~~~~~~-~~~~~~~l~~~~~~~~~~~g~~-~~~~~~~g~~D~~~~~~~gip~~~~g~~~~---~~H~~~E~i~ 353 (373)
T 3gb0_A 285 N------VMYPGF-KFADGDHVVEVAKRAAEKIGRT-PSLHQSGGGSDANVIAGHGIPTVNLAVGYE---EIHTTNEKIP 353 (373)
T ss_dssp E------EEECCE-ECCTTCHHHHHHHHHHHHTTCC-CEEEECSSCCHHHHHHHTTCCEEEEECCCB---STTSTTCEEE
T ss_pred e------cccCCc-ccCCCCHHHHHHHHHHHHhCCC-ceEecccCcchHHHHHhCCCCEEEecCCCC---cCcCCceEEE
Confidence 2 233333 2456789999999999986433 244556789999999988999999999864 6999999999
Q ss_pred hHhHHHHHHHHHHHHHHh
Q 013641 414 DTVFLKGVEVYESVISSL 431 (439)
Q Consensus 414 ~~~l~~~~~~~~~~l~~~ 431 (439)
++++.+++++|+.++.++
T Consensus 354 ~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 354 VEELAKTAELVVAIIEEV 371 (373)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999999887
No 11
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=3.4e-51 Score=418.43 Aligned_cols=392 Identities=16% Similarity=0.253 Sum_probs=303.8
Q ss_pred CCchhHHHHHHhHhcCcCCCCCC----CCchHHHHHHHHHHhcCCceEEEEec-----CCc-----cEEEEEEcCCCCCC
Q 013641 26 HEEREPITRFKQYLRFNTAHPNP----NYTAPVSFLISQAQSIGLQFKTLEFV-----PNK-----PILLLTWPGSDPSL 91 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~----~e~~~~~~l~~~l~~~G~~~~~~~~~-----~~~-----~nvi~~~~g~~~~~ 91 (439)
.+.++++++|++|++|||+|... ++.++++||+++|+++|++++.+... ++. +||++++++. +++
T Consensus 17 ~~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~-~~~ 95 (479)
T 2zog_A 17 ENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSD-PQK 95 (479)
T ss_dssp HTHHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCC-TTS
T ss_pred HhHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCC-CCC
Confidence 45788999999999999998321 23799999999999999998876531 233 8999999653 346
Q ss_pred CcEEEeeecccccCCC-CCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCccc
Q 013641 92 PSILFNSHLDSVPAEP-DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEI 170 (439)
Q Consensus 92 ~~vll~aH~Dtvp~~~-~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~ 170 (439)
|+|+|+|||||||.++ +.|+.+||++.++ ||++||||++|||++++++|.|++.|+ +.+.+++++|+|+|+++||.
T Consensus 96 ~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~--~g~l~grGa~D~K~g~a~~l~a~~~l~-~~~~~~~~~v~~~~~~~EE~ 172 (479)
T 2zog_A 96 KTVCIYGHLDVQPAALEDGWDSEPFTLVER--EGKLYGRGSTDDKGPVAGWMNALEAYQ-KTGQEIPVNLRFCLEGMEES 172 (479)
T ss_dssp CEEEEEEECCBCCCCGGGTCSSCTTSCEEE--TTEEESTTTTTTHHHHHHHHHHHHHHH-HTTCCCSSEEEEEEESCGGG
T ss_pred CeEEEEEecCCCCCCccccCcCCCCcceeE--CCEEEeeccccChHHHHHHHHHHHHHH-HhCCCCCCcEEEEEeccccc
Confidence 8999999999999986 6899999999998 999999999999999999999999999 88888899999999999999
Q ss_pred CcccCHHHHHhcc---cccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCC--CCcCCCCCCcHHHHHHHHHH
Q 013641 171 GGFDGMAKFVESN---EFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAP--GHGSRMFDNGAMENLMKSVE 245 (439)
Q Consensus 171 g~~~G~~~~~~~~---~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~--~Hs~~p~~gnai~~~~~~i~ 245 (439)
|+ .|++.++++. .+.++|++++++.+...++ .+.++++.+|..+++|+++|++ +|||.+ +.||+..+++++.
T Consensus 173 g~-~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~-~~~i~~~~~G~~~~~i~v~G~~~~~Hs~~~-g~~ai~~~~~~i~ 249 (479)
T 2zog_A 173 GS-EGLDELIFAQKDKFFKDVDYVCISDNYWLGKN-KPCITYGLRGICYFFIEVECSDKDLHSGVY-GGSVHEAMTDLIS 249 (479)
T ss_dssp TC-TTHHHHHHHTTTTTTTTCCEEEECCCBCSSSS-SCEEEEEECEEEEEEEEEECCSSCEEHHHH-TTTSCCHHHHHHH
T ss_pred CC-ccHHHHHHhhhhhhcccCCEEEEeCCCcCCCC-CeEEEEecceEEEEEEEEEeCCCCCccCCC-CCCccCHHHHHHH
Confidence 87 8999999865 2335677777764432222 4678999999999999999999 999985 3499999999999
Q ss_pred HHHccccch---------------------------hH--HHHh--cccc---------C---CCceEeeEeEEeecccC
Q 013641 246 MITKFRESQ---------------------------FD--VVKA--GRAA---------N---SEVISVNLVYLKAGIPS 282 (439)
Q Consensus 246 ~l~~~~~~~---------------------------~~--~~~~--~~~~---------~---~~~~t~~~~~i~gg~~~ 282 (439)
.|+.+.... ++ .+.+ +... . ...++++++.|+||..
T Consensus 250 ~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gg~~- 328 (479)
T 2zog_A 250 LMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLHGIEGAFS- 328 (479)
T ss_dssp HHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEEEEEESSCC-
T ss_pred HHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEEeeeecCCc-
Confidence 987664321 00 0000 0000 0 0136899999998831
Q ss_pred CCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc----CCCceEEEeeccccccCCCCCccccCCCCChHHHH
Q 013641 283 PTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA----IRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSV 358 (439)
Q Consensus 283 ~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 358 (439)
++.+.|+||++|++++++|+.|.++.+++.++|+++++.. .....++++.. ..+|++ .++.|+++++.
T Consensus 329 -g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~p~~-~~~~d~~~~~~ 400 (479)
T 2zog_A 329 -GSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMG------HGGKPW-VSDFNHPHYQA 400 (479)
T ss_dssp -SSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEEE------EEECCE-ECCTTSHHHHH
T ss_pred -CCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEec------CCCCce-ecCCCCHHHHH
Confidence 2238999999999999999999999999999998887642 12345555432 123333 24567899999
Q ss_pred HHHHHHHhCCCCCccccccCCccH-HHHHH-hCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhcc
Q 013641 359 FKRAVTSAGGKLGKPEILASTTDA-RYMRQ-LGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSF 434 (439)
Q Consensus 359 l~~a~~~~~~~~~~~~~~~~~tD~-~~~~~-~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~~ 434 (439)
+.+++++.++..+......|++|+ ++|.+ .++|++.+|++... ..+|++||+++++++.+++++|+.++.++++.
T Consensus 401 ~~~a~~~~~g~~~~~~~~~gs~d~~~~~~~~~~~p~~~~g~g~~~-~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~ 477 (479)
T 2zog_A 401 GRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSAD-DGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQL 477 (479)
T ss_dssp HHHHHHHHHSSCCEEEEESSCCTHHHHHHHHHCSEEEECCCBCTT-CCTTSTTCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCceecCCCCccchHHHHHHHhCCCEEEecCCCCc-cCCCCCCCcEeHHHHHHHHHHHHHHHHHHHhh
Confidence 999999986654233334577897 57765 58999976444321 36999999999999999999999999998764
No 12
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.2e-51 Score=402.39 Aligned_cols=352 Identities=14% Similarity=0.205 Sum_probs=285.5
Q ss_pred chhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCc-eEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccCC
Q 013641 28 EREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQ-FKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAE 106 (439)
Q Consensus 28 ~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~-~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~ 106 (439)
.+++++++++|++|||+| ++|.++++||.++|+++|+. ++... ..+|+++++++. ++|+|+|+|||||||++
T Consensus 12 ~~~~~~~~~~l~~~ps~s--~~e~~~~~~l~~~l~~~G~~~~~~~~---~~~~~~a~~~~~--~~~~v~l~~H~D~vp~~ 84 (369)
T 3tx8_A 12 LGDPIVLTQRLVDIPSPS--GQEKQIADEIEDALRNLNLPGVEVFR---FNNNVLARTNRG--LASRVMLAGHIDTVPIA 84 (369)
T ss_dssp CSCHHHHHHHHHSSCCBT--TCTHHHHHHHHHHHHTTTCTTCEEEE---ETTEEEEECCCC--CSCEEEEEEECCBSCCC
T ss_pred HHHHHHHHHHHhcCCCCC--ccHHHHHHHHHHHHHhcCCCCcEEec---cCCcEEEEecCC--CCCeEEEEcccCccCCC
Confidence 678999999999999997 78999999999999999984 55443 256899999764 35899999999999997
Q ss_pred CCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcc-cCHHHHHhccc-
Q 013641 107 PDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGF-DGMAKFVESNE- 184 (439)
Q Consensus 107 ~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~-~G~~~~~~~~~- 184 (439)
+ ||.+..+ ||++||||++|||++++++|.|++.|+ +. .+++++|.|+|+++||.|+. .|++.+++++.
T Consensus 85 ~------~~~~~~~--~g~~~g~G~~D~K~~~a~~l~a~~~l~-~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~ 154 (369)
T 3tx8_A 85 D------NLPSRVE--DGIMYGCGTVDMKSGLAVYLHTFATLA-TS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPE 154 (369)
T ss_dssp S------CCSCEEC--SSEEESSSTTTTHHHHHHHHHHHHHHT-SC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGG
T ss_pred C------CCCCeEE--CCEEEcCCcccchHHHHHHHHHHHHHH-hh-cCCCccEEEEEEeccccCcccccHHHHHHhccc
Confidence 4 5667777 999999999999999999999999998 64 36889999999999999852 48999988651
Q ss_pred ccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccccchhHHHHhccc
Q 013641 185 FRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFRESQFDVVKAGRA 263 (439)
Q Consensus 185 ~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 263 (439)
..+.+++++. +|+. ..++++.+|..+++|+++|+++|++.|+.+ ||+..+++++..|+++.....+ . .
T Consensus 155 ~~~~~~~i~~-----ep~~-~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~-~-~--- 223 (369)
T 3tx8_A 155 WLAADLALLG-----EPTG-GWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVN-I-D--- 223 (369)
T ss_dssp GGCCSEEEEC-----CCCT-TCEEESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEE-E-T---
T ss_pred ccCCCEEEEe-----CCCC-CceeeecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccc-c-C---
Confidence 1235655554 4653 688999999999999999999999999888 9999999999999876432100 0 0
Q ss_pred cCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc-CCCceEEEeeccccccCCC
Q 013641 264 ANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA-IRNMSYEIIEKGPIRDYKG 342 (439)
Q Consensus 264 ~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 342 (439)
......+++++.+++|. +.|+||++|++++++|++|.++.+++.++|++.+++. ..++++++... .
T Consensus 224 ~~~~~~~~~vg~i~gG~------~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~g~~~~~~~~-------~ 290 (369)
T 3tx8_A 224 GLTYREGLNIVFCESGV------ANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDGQDGIEWAVEDG-------A 290 (369)
T ss_dssp TEEEECEEEEEEEEECS------BTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTTSTTEEEEEEEE-------E
T ss_pred CcccCceEEEEEEECCC------CCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcccCCeEEEEEec-------C
Confidence 00013689999999987 9999999999999999999999999999999888742 24566666431 1
Q ss_pred CCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHH
Q 013641 343 RPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVE 422 (439)
Q Consensus 343 ~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~ 422 (439)
.++. +..++++++.+.+++ +.. .+....+++|+++|.+.|+|++.|||+... .+|++||+++++++.++++
T Consensus 291 ~~~~--~~~~~~~~~~~~~~~----g~~-~~~~~~ggtD~~~~~~~giP~~~~Gpg~~~--~~H~~~E~v~~~~l~~~~~ 361 (369)
T 3tx8_A 291 GGAL--PGLGQQVTSGLIDAV----GRE-KIRAKFGWTDVSRFSAMGIPALNFGAGDPS--FAHKRDEQCPVEQITDVAA 361 (369)
T ss_dssp CCBC--CCTTSHHHHHHHHHH----CGG-GEEECCSCCTHHHHHTTTCCEEEECSSCSS--SSSCTTCEEEHHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHHc----CCC-CCcccccccchHHHhhCCCCEEEECCCChh--hCCCCCcEEEHHHHHHHHH
Confidence 2222 345789988887764 221 223456889999999889999999998643 7999999999999999999
Q ss_pred HHHHHHH
Q 013641 423 VYESVIS 429 (439)
Q Consensus 423 ~~~~~l~ 429 (439)
+|+.+|.
T Consensus 362 ~l~~~l~ 368 (369)
T 3tx8_A 362 ILKQYLS 368 (369)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999885
No 13
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=2.2e-50 Score=412.63 Aligned_cols=392 Identities=17% Similarity=0.249 Sum_probs=298.9
Q ss_pred CCchhHHHHHHhHhcCcCC--CCCC----CCchHHHHHHHHHHhcCCceEEEEec-----CC-----ccEEEEEEcCCCC
Q 013641 26 HEEREPITRFKQYLRFNTA--HPNP----NYTAPVSFLISQAQSIGLQFKTLEFV-----PN-----KPILLLTWPGSDP 89 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~--s~~~----~e~~~~~~l~~~l~~~G~~~~~~~~~-----~~-----~~nvi~~~~g~~~ 89 (439)
.+.++++++|++|++|||+ |..+ ++.++++||+++|+++|++++.+... .+ .+||++++++. +
T Consensus 22 ~~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a~~~~~-~ 100 (485)
T 3dlj_A 22 LHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSD-P 100 (485)
T ss_dssp HTHHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEEEECCC-T
T ss_pred HhHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEEEECCC-C
Confidence 4678999999999999999 6321 26799999999999999998876532 12 36899999653 3
Q ss_pred CCCcEEEeeecccccCCC-CCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCc
Q 013641 90 SLPSILFNSHLDSVPAEP-DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDE 168 (439)
Q Consensus 90 ~~~~vll~aH~Dtvp~~~-~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~E 168 (439)
++++|+|+|||||||+++ +.|+.+||++.++ ||++||||++|||++++++|.|+++|+ +.+.+++++|.|+|+++|
T Consensus 101 ~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~--~g~l~grG~~D~k~~~a~~l~a~~~l~-~~~~~~~~~v~~~~~~~E 177 (485)
T 3dlj_A 101 TKGTVCFYGHLDVQPADRGDGWLTDPYVLTEV--DGKLYGRGATDNKGPVLAWINAVSAFR-ALEQDLPVNIKFIIEGME 177 (485)
T ss_dssp TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEE--TTEEESTTTTTTHHHHHHHHHHHHHHH-HTTCCCSSEEEEEEESCG
T ss_pred CCCEEEEEeeecCCCCCCcccCCCCCCccEEE--CCEEEecccccCcHHHHHHHHHHHHHH-HhCCCCCccEEEEEEccc
Confidence 468999999999999986 6899999999998 999999999999999999999999999 888889999999999999
Q ss_pred ccCcccCHHHHHhccc---ccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCC--CcCCCCCCcHHHHHHHH
Q 013641 169 EIGGFDGMAKFVESNE---FRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPG--HGSRMFDNGAMENLMKS 243 (439)
Q Consensus 169 E~g~~~G~~~~~~~~~---~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~--Hs~~p~~gnai~~~~~~ 243 (439)
|.|+ .|++.+++++. ++++|++++++.+...+ ..+.++++.+|..+++|+|+|+++ |+|. .+.||+..+..+
T Consensus 178 E~g~-~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~-~g~~a~~~~~~l 254 (485)
T 3dlj_A 178 EAGS-VALEELVEKEKDRFFSGVDYIVISDNLWISQ-RKPAITYGTRGNSYFMVEVKCRDQDFHSGT-FGGILHEPMADL 254 (485)
T ss_dssp GGTT-TTHHHHHHHHTTTTSTTCCEEEECCCBCCC---CCEEEEEECEEEEEEEEEESCSSCEETTT-STTSSCCHHHHH
T ss_pred ccCC-ccHHHHHHhhhhhcccCCCEEEEcCCCccCC-CCeeEEEeccceEEEEEEEEECCCCCcCCC-CCccccCHHHHH
Confidence 9997 89999998753 45678777775322111 246789999999999999999999 9987 333777777777
Q ss_pred HHHHHccccch--------hHH-----------HHh------------ccccC------------CCceEeeEeEEeecc
Q 013641 244 VEMITKFRESQ--------FDV-----------VKA------------GRAAN------------SEVISVNLVYLKAGI 280 (439)
Q Consensus 244 i~~l~~~~~~~--------~~~-----------~~~------------~~~~~------------~~~~t~~~~~i~gg~ 280 (439)
++.|..+.... ++. +.. +.... ...++++++.|+||.
T Consensus 255 ~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gG~ 334 (485)
T 3dlj_A 255 VALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIHGIEGAF 334 (485)
T ss_dssp HHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTSCEEEEEEEESSC
T ss_pred HHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcCCceEEEEEecCC
Confidence 77776653311 000 000 00000 014789999999983
Q ss_pred cCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc--CCC--ceEEEeeccccccCCCCCccccCCCCChHH
Q 013641 281 PSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA--IRN--MSYEIIEKGPIRDYKGRPLMTLTDDSNPWW 356 (439)
Q Consensus 281 ~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~--~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 356 (439)
. ++.+.|+||++|++++++|+.+.++.+++.++|+++++.. ..+ .+++++.. ..+|++ ..+.+++++
T Consensus 335 ~--gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~~------~~~pp~-~~~~d~~~~ 405 (485)
T 3dlj_A 335 D--EPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMT------LGLHPW-IANIDDTQY 405 (485)
T ss_dssp C--SSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEEE------EEECCE-ECCTTSHHH
T ss_pred c--CCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEEc------CCCCce-eCCCCCHHH
Confidence 1 2238999999999999999999999999999999888752 223 35555542 223333 245567999
Q ss_pred HHHHHHHHHhCCCCCccccccCCccH-HHHHH-hCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhcc
Q 013641 357 SVFKRAVTSAGGKLGKPEILASTTDA-RYMRQ-LGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSF 434 (439)
Q Consensus 357 ~~l~~a~~~~~~~~~~~~~~~~~tD~-~~~~~-~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~~ 434 (439)
+.+.+++++..+..+......+++|+ ++|.+ .++|.+.+|.+.. ....|+|||+++++++..++++|+.++..+++.
T Consensus 406 ~~~~~a~~~~~G~~~~~~~~ggs~Dfa~~~~~~~p~~~i~~g~g~~-~~~~H~p~E~i~~~~l~~g~~~l~~~l~~la~~ 484 (485)
T 3dlj_A 406 LAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAV-DDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQL 484 (485)
T ss_dssp HHHHHHHHHHHSSCCEEEEESSCCHHHHHHHHHTC--CEECCCBCT-TCCTTSTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCceecCCCCchhHHHHHHHHhCCCEEEecCCCC-CCCCcCCCCCccHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999976554232335567885 56755 5777777776542 136999999999999999999999999998764
No 14
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=1e-51 Score=407.34 Aligned_cols=350 Identities=18% Similarity=0.261 Sum_probs=287.7
Q ss_pred CchhHHHHHHhHhcCcCCCCC-CCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCC-CCCCCcEEEeeeccccc
Q 013641 27 EEREPITRFKQYLRFNTAHPN-PNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGS-DPSLPSILFNSHLDSVP 104 (439)
Q Consensus 27 ~~~~~i~~l~~lv~ips~s~~-~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~-~~~~~~vll~aH~Dtvp 104 (439)
+.+++++++++|++|||+|.+ ++|.++++||+++|+++|++++.+. +|+++.++|+ +.++|+|+|++||||||
T Consensus 4 ~~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~i~l~aH~D~vp 78 (364)
T 2rb7_A 4 SMQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERMD-----HDGIPSVMVLPEKGRAGLLLMAHIDVVD 78 (364)
T ss_dssp HHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ETTEEEEEECSBTTEEEEEEEEECCCCC
T ss_pred cHHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEec-----CCCceEEEEEcCCCCCeEEEECccCcCC
Confidence 467899999999999999743 4688999999999999999988652 4678887642 22358999999999998
Q ss_pred CCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCC---Cee--EEEEEecCcccCcccCHHHH
Q 013641 105 AEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKP---IRT--VHASYVPDEEIGGFDGMAKF 179 (439)
Q Consensus 105 ~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~---~~~--i~~~~~~~EE~g~~~G~~~~ 179 (439)
. +.+||.+.++ ||++||||++|||++++++|.|++.|+ +.+.++ +++ |.|+|+++||.|+..|++.+
T Consensus 79 ~-----~~~p~~~~~~--~g~~~grG~~D~k~~~a~~l~a~~~l~-~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~ 150 (364)
T 2rb7_A 79 A-----EDDLFVPRVE--NDRLYGRGANDDKYAVALGLVMFRDRL-NALKAAGRSQKDMALGLLITGDEEIGGMNGAAKA 150 (364)
T ss_dssp C-----CGGGGSCEEE--TTEEESTTTTTTHHHHHHHHHHHHHHH-HHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHH
T ss_pred C-----CCCCCccEEE--CCEEEecccccccHHHHHHHHHHHHHH-HhCCCCcccCCCccEEEEEEeccccCchhhHHHH
Confidence 6 3689999998 999999999999999999999999999 766556 568 99999999997544799999
Q ss_pred HhcccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccccchhHHH
Q 013641 180 VESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFRESQFDVV 258 (439)
Q Consensus 180 ~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~ 258 (439)
++++ +.|++++++.+ +|++ ++++.+|..+++|+++|+++|++.|+.| |||..+++++..|+.+.... .
T Consensus 151 ~~~~---~~d~~i~~d~~--~p~~---i~~~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~---~ 219 (364)
T 2rb7_A 151 LPLI---RADYVVALDGG--NPQQ---VITKEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFAEE---N 219 (364)
T ss_dssp GGGC---EEEEEEECSSS--BTTE---EEEEECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSCCC---C
T ss_pred HhcC---CCCEEEEccCC--cccc---eEEEeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhccch---h
Confidence 9865 46777777644 4653 8899999999999999999999999888 99999999999998762100 0
Q ss_pred HhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccc
Q 013641 259 KAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIR 338 (439)
Q Consensus 259 ~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 338 (439)
. ....++++++.++||. +.|+||++|++++++|+++.++.+++.++|++.++. +++..
T Consensus 220 ----~-~~~~~~~~vg~i~gG~------~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-----~v~~~------ 277 (364)
T 2rb7_A 220 ----E-DHWHRTVNLGRIRAGE------STNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-----TVSIV------ 277 (364)
T ss_dssp ----T-TCCSCEEEEEEEEECS------CTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-----EEEEE------
T ss_pred ----h-cCCCceEEEEEEecCC------cCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-----hEEec------
Confidence 0 0024789999999997 899999999999999999999999999999988863 34422
Q ss_pred cCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHH
Q 013641 339 DYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFL 418 (439)
Q Consensus 339 ~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~ 418 (439)
...|+. .+.|+++++.+.++++ ..+. + ..+++|+++|.+.++|++.|||+... ..|++||+++++++.
T Consensus 278 --~~~~~~--~~~~~~l~~~~~~~~~-~~g~---~--~~g~~D~~~~~~~~~p~v~~Gp~~~~--~~H~~~E~i~~~~l~ 345 (364)
T 2rb7_A 278 --RTVPVF--LAADSPYTERLLALSG-ATAG---K--AHGASDARYLGENGLTGVVWGAEGFN--TLHSRDECLHIPSLQ 345 (364)
T ss_dssp --EEECCE--ECCCCHHHHHHHHHHC-CEEE---E--ESSCCGGGGTGGGTCCEEECCCCCTT--CTTSTTCEEETTHHH
T ss_pred --cCCccc--cCCCCHHHHHHHHHHH-hcCC---C--CCCCchHHHHHhcCCCEEEECCCCcc--ccCCCCccccHHHHH
Confidence 223333 4557899999999987 3332 2 56889999998889999999998641 249999999999999
Q ss_pred HHHHHHHHHHHHhhcc
Q 013641 419 KGVEVYESVISSLSSF 434 (439)
Q Consensus 419 ~~~~~~~~~l~~~~~~ 434 (439)
+++++|+.++..+++.
T Consensus 346 ~~~~~~~~~~~~~~~~ 361 (364)
T 2rb7_A 346 SIYDPLMQLAREMEEH 361 (364)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998754
No 15
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.3e-51 Score=410.52 Aligned_cols=367 Identities=13% Similarity=0.087 Sum_probs=283.1
Q ss_pred CCCCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccc
Q 013641 24 KSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSV 103 (439)
Q Consensus 24 ~~~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtv 103 (439)
.....+++++++++|++|||+| ++|.++++||.++|+++|++++.+.. +++||+++++|+++ +|+|+|+||||||
T Consensus 27 ~~~~~~~~i~~~~~l~~ips~s--~~e~~~~~~l~~~l~~~G~~v~~~~~--~~~nv~a~~~g~~~-~~~i~l~~H~D~v 101 (404)
T 1ysj_A 27 DKAFHTRLINMRRDLHEHPELS--FQEVETTKKIRRWLEEEQIEILDVPQ--LKTGVIAEIKGRED-GPVIAIRADIDAL 101 (404)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCT--TCCHHHHHHHHHHHHHTTCEECCCTT--CSSCEEEEEECSSC-CCEEEEEEECCCB
T ss_pred hHHHHHHHHHHHHHHHhcCCCC--CChHHHHHHHHHHHHHcCCceEEecc--CCceEEEEEeCCCC-CCEEEEEEecccc
Confidence 3345688999999999999997 78999999999999999998765432 46799999987543 4899999999999
Q ss_pred cCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcc
Q 013641 104 PAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESN 183 (439)
Q Consensus 104 p~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 183 (439)
|.++ |+.+||++. . ||++||||+ |++++++|.|++.|+ +.+.+++++|.|+|+++||. + .|++++++++
T Consensus 102 p~~~--~~~~Pf~~~-~--~g~l~g~G~---kg~~a~~l~a~~~l~-~~~~~~~~~v~~~~~~~EE~-~-~G~~~~~~~g 170 (404)
T 1ysj_A 102 PIQE--QTNLPFASK-V--DGTMHACGH---DFHTASIIGTAMLLN-QRRAELKGTVRFIFQPAEEI-A-AGARKVLEAG 170 (404)
T ss_dssp SCCC--CCCCTTCCS-S--TTCBCTTSH---HHHHHHHHHHHHHHH-TCGGGCSSEEEEEEESCTTT-T-CHHHHHHHTT
T ss_pred cCCC--CCCCCcccC-C--CCceEcCcC---hHHHHHHHHHHHHHH-hccccCCceEEEEEeccccc-c-hhHHHHHhcC
Confidence 9874 999999986 4 999999995 799999999999999 87667899999999999998 4 7999999887
Q ss_pred cccccceEEEEecCCcCCCCcceEEee--ccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccccchhHHHHh
Q 013641 184 EFRELNVGFVMDEGQASTNDDFRVFYA--DRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFRESQFDVVKA 260 (439)
Q Consensus 184 ~~~~~~~~~v~~~g~~~p~~~~~i~~~--~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~ 260 (439)
.++++|..+.++.....+.+...+..+ .+|..+++|+++|+++|++.|+.| |||..+++++..|+++.....+.
T Consensus 171 ~~~~~d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~--- 247 (404)
T 1ysj_A 171 VLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISS--- 247 (404)
T ss_dssp TTTTEEEEEEEEEETTSCTTEEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC------------
T ss_pred CCcCCCEEEEEecCCCCCCceEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCC---
Confidence 665567666553211112221222234 578999999999999999999988 99999999999997653211111
Q ss_pred ccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc--CCCceEEEeeccccc
Q 013641 261 GRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA--IRNMSYEIIEKGPIR 338 (439)
Q Consensus 261 ~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~ 338 (439)
...++++++.++||. +.|+||++|++++++|+.+.++.+++.++|++.++.. ..+++++++..
T Consensus 248 -----~~~~~~~vg~i~gG~------~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~---- 312 (404)
T 1ysj_A 248 -----LQNAVVSITRVQAGT------SWNVIPDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKWF---- 312 (404)
T ss_dssp -------CCEEEEEEEEECS------CSSSCCSEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE----
T ss_pred -----CCCcEEEEEEEEcCC------CCceecCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEe----
Confidence 123689999999987 9999999999999999999999999999999888642 35666666542
Q ss_pred cCCCCCccccCCCCChHHHHHHHHHHHh-CCCCCccccccCCccHHHHHHhCCCEE--EEccCCCCCCCCCCCCCccchH
Q 013641 339 DYKGRPLMTLTDDSNPWWSVFKRAVTSA-GGKLGKPEILASTTDARYMRQLGIPVL--GFSPMANTPILLHDHNEFLKDT 415 (439)
Q Consensus 339 ~~~~~p~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~~~~~~~tD~~~~~~~gip~v--~~Gp~~~~~~~~H~~nE~i~~~ 415 (439)
..+|+. ..+.++++.+.+++++. .+..+.. ...+++|+++|.+. +|++ .|||+.. ..+|++||+++++
T Consensus 313 --~~~~~~---~~~~~l~~~~~~~~~~~g~g~~~~~-~~~g~tD~~~~~~~-~p~~~~~~G~~~~--~~~H~~~E~v~~~ 383 (404)
T 1ysj_A 313 --PYLPSV---QNDGTFLNAASEAAARLGYQTVHAE-QSPGGEDFALYQEK-IPGFFVWMGTNGT--EEWHHPAFTLDEE 383 (404)
T ss_dssp --EEECCE---EECGGGHHHHHHHHHHTTCEEEECC-CBSSCCTHHHHHTT-SCEEEEEEECCCS--SCTTCTTCCCCTT
T ss_pred --cCCCCc---cCCHHHHHHHHHHHHHhcCCccccc-cCCccchHHHHHHH-CCeEEEEEcCCCC--CCCCCCCCcCCHH
Confidence 233343 23578999999999998 5543233 56789999999875 8975 6788753 2699999999999
Q ss_pred hHHHHHHHHHHHHHHhhc
Q 013641 416 VFLKGVEVYESVISSLSS 433 (439)
Q Consensus 416 ~l~~~~~~~~~~l~~~~~ 433 (439)
++.+++++|+.++.++++
T Consensus 384 ~l~~~~~~~~~~~~~~~~ 401 (404)
T 1ysj_A 384 ALTVASQYFAELAVIVLE 401 (404)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998875
No 16
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=6e-51 Score=409.22 Aligned_cols=365 Identities=14% Similarity=0.111 Sum_probs=279.8
Q ss_pred hhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccCCCC
Q 013641 29 REPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPD 108 (439)
Q Consensus 29 ~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~~~ 108 (439)
+++++++++|++|||+| ++|.++++||+++|+++|++++.+. +.+||+++++|.+ . |+|+|+|||||||.++
T Consensus 28 ~~~i~~~~~l~~ips~s--~~e~~~~~~l~~~l~~~G~~v~~~~---~~~~l~a~~~~~~-~-~~i~l~aH~D~vp~~~- 99 (418)
T 1xmb_A 28 DWMVKIRRKIHENPELG--YEELETSKLIRSELELIGIKYRYPV---AITGVIGYIGTGE-P-PFVALRADMDALPIQE- 99 (418)
T ss_dssp HHHHHHHHHHHHSCCCT--TCCHHHHHHHHHHHHHHTCCEEEEE---TTTEEEEEEESSS-S-CEEEEEEECCCBSCCC-
T ss_pred HHHHHHHHHHHhCCCCC--CChHHHHHHHHHHHHHcCCeeEecc---CCcEEEEEEcCCC-C-CEEEEEecccccCCCC-
Confidence 88999999999999997 7899999999999999999987754 3689999998754 2 7999999999999874
Q ss_pred CCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhccccccc
Q 013641 109 KWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFREL 188 (439)
Q Consensus 109 ~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~ 188 (439)
|+.+||++ .+ ||++||||+ |++++++|.|++.|+ +.+.+++++|+|+|+++|| |+ .|++.+++++.++++
T Consensus 100 -~~~~pf~~-~~--~g~~~g~G~---d~~~a~~l~a~~~l~-~~~~~~~~~v~~~~~~~EE-g~-~G~~~~~~~g~~~~~ 169 (418)
T 1xmb_A 100 -GVEWEHKS-KI--AGKMHACGH---DGHVTMLLGAAKILH-EHRHHLQGTVVLIFQPAEE-GL-SGAKKMREEGALKNV 169 (418)
T ss_dssp -CCCSTTCC-SS--TTCBCCSSH---HHHHHHHHHHHHHHH-HTGGGCSSEEEEEEECCTT-TT-CHHHHHHHTTTTTTE
T ss_pred -CCCCCccc-CC--CCceEeCCc---hHHHHHHHHHHHHHH-hccccCCceEEEEEecccc-cc-ccHHHHHHcCCcCCC
Confidence 88999997 34 999999996 599999999999999 8777789999999999999 76 899999988766556
Q ss_pred ceEEEEecCCcCCCCcc--eEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccccchhHHHHhccccC
Q 013641 189 NVGFVMDEGQASTNDDF--RVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFRESQFDVVKAGRAAN 265 (439)
Q Consensus 189 ~~~~v~~~g~~~p~~~~--~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 265 (439)
|.+++++.....|++.. .+..+.+|..+++|+++|+++|++.|+.| |||..|++++..|+.+.....+.
T Consensus 170 d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~-------- 241 (418)
T 1xmb_A 170 EAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDP-------- 241 (418)
T ss_dssp EEEEEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSG--------
T ss_pred CEEEEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCC--------
Confidence 76776643222455432 34567899999999999999999999988 99999999999998764221111
Q ss_pred CCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc--CCCceEEEeeccccccCCC-
Q 013641 266 SEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA--IRNMSYEIIEKGPIRDYKG- 342 (439)
Q Consensus 266 ~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~- 342 (439)
...++++++.++||. +.|+||++|++++++|+.+ +.+++.++|++.++.. ..+++++++.. ..
T Consensus 242 ~~~~t~~vg~i~gG~------~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~~------~~~ 307 (418)
T 1xmb_A 242 LDSKVVTVSKVNGGN------AFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLT------PNG 307 (418)
T ss_dssp GGCEEEEEEEEC--------------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEESS------GGG
T ss_pred CCCcEEEEEEEEecC------cCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEEc------cCC
Confidence 023689999999987 9999999999999999999 8999999999888642 35667776642 22
Q ss_pred CCccccCCCCChHHHHHHHHHHHhCCCCC--ccccccCCccHHHHHHhCCCEE--EEccCCCC--CCCCCCCCCccchHh
Q 013641 343 RPLMTLTDDSNPWWSVFKRAVTSAGGKLG--KPEILASTTDARYMRQLGIPVL--GFSPMANT--PILLHDHNEFLKDTV 416 (439)
Q Consensus 343 ~p~~~~~~~~~~~~~~l~~a~~~~~~~~~--~~~~~~~~tD~~~~~~~gip~v--~~Gp~~~~--~~~~H~~nE~i~~~~ 416 (439)
+|+..++..|+++++.+.+++++..+..+ .+....+++|+++|.+. +|++ .|||+... ...+|++||++++++
T Consensus 308 ~~p~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~P~~~~~~G~~~~~~~~~~~H~~~E~i~~~~ 386 (418)
T 1xmb_A 308 REPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAET-IPGHFSLLGMQDETNGYASSHSPLYRINEDV 386 (418)
T ss_dssp CCCBCCEEECHHHHHHHHHHHHHHHCGGGEEECCCBCCCCTHHHHHTT-SCEEEEEEEEECTTCCSCCTTCTTCCCCGGG
T ss_pred cccCCCccCCHHHHHHHHHHHHHhcCCcceeccCCCCCcchHHHHHHH-CCEEEEEEeCCCCCCCCCCCCCCCCccCHHH
Confidence 12222244678999999999999755432 24456789999999874 8985 47886421 136999999999999
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 013641 417 FLKGVEVYESVISSLSSF 434 (439)
Q Consensus 417 l~~~~~~~~~~l~~~~~~ 434 (439)
+.+++++|+.++.++++.
T Consensus 387 l~~~~~~~~~~~~~l~~~ 404 (418)
T 1xmb_A 387 LPYGAAIHASMAVQYLKE 404 (418)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998754
No 17
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=7.1e-52 Score=417.96 Aligned_cols=361 Identities=17% Similarity=0.169 Sum_probs=290.9
Q ss_pred CchhHHHHHHhHhcCcCCCCCC--------CCchHHHHHHHHHHhcCCc-eEEEEecCCccEEEEEEcCCCC-CCCcEEE
Q 013641 27 EEREPITRFKQYLRFNTAHPNP--------NYTAPVSFLISQAQSIGLQ-FKTLEFVPNKPILLLTWPGSDP-SLPSILF 96 (439)
Q Consensus 27 ~~~~~i~~l~~lv~ips~s~~~--------~e~~~~~~l~~~l~~~G~~-~~~~~~~~~~~nvi~~~~g~~~-~~~~vll 96 (439)
..++++++|++|++|||+|... +|.++++||.++|+++|++ ++.+ ..+||+++++|+++ +.|+|+|
T Consensus 25 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d----~~~nv~a~~~g~~~~~~~~v~l 100 (434)
T 3ife_A 25 MKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD----DNGYVMATLPANTDKDVPVIGF 100 (434)
T ss_dssp HHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC----TTSCEEEEECCBSSSCCCCEEE
T ss_pred HHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC----CCcEEEEEeCCCCCCCCCeEEE
Confidence 4578999999999999998532 5789999999999999997 6654 57899999988653 4689999
Q ss_pred eeecccccCCCCCCCCCCCceeEe--------------------------CCCCEEEecCc----ccchhHHHHHHHHHH
Q 013641 97 NSHLDSVPAEPDKWSHPPFSAFHS--------------------------PETGQIFARGS----QDDKCIAIQYIEAIR 146 (439)
Q Consensus 97 ~aH~Dtvp~~~~~w~~~Pf~~~~~--------------------------~~dg~i~GrG~----~D~k~~~aa~l~a~~ 146 (439)
+|||||||.. .+|..+||..... ..+|+|||||+ +|||++++++|.|++
T Consensus 101 ~~H~DtVp~~-~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~ 179 (434)
T 3ife_A 101 LAHLDTATDF-TGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMN 179 (434)
T ss_dssp EEECCBCTTS-CCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHH
T ss_pred EEEcccCCCC-CCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHH
Confidence 9999999986 4799999865322 01269999997 999999999999999
Q ss_pred HHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCC
Q 013641 147 NLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPG 226 (439)
Q Consensus 147 ~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~ 226 (439)
.|+ +.+..++++|.|+|+++||.| .|++.+... .+ .+|++++++.+ + ...++++.+|..+++|+++|+++
T Consensus 180 ~L~-~~~~~~~~~i~~if~~~EE~g--~Ga~~~~~~-~~-~~d~~~~~d~~---~--~g~i~~~~~G~~~~~i~v~G~~~ 249 (434)
T 3ife_A 180 YLI-HNPQIKHGKIRVAFTPDEEIG--RGPAHFDVE-AF-GASFAYMMDGG---P--LGGLEYESFNAAGAKLTFNGTNT 249 (434)
T ss_dssp HHH-TCTTSCBCCEEEEEESCGGGT--CTGGGCCHH-HH-CCSEEEECCCC---S--TTEEECCBCEEEEEEEEEECBCC
T ss_pred HHH-hCCCCCCCCEEEEEECCcccC--hHHHHhhhh-hc-CCCEEEEecCC---C--CCceeecCCCeEEEEEEEEEEec
Confidence 999 887788999999999999998 488776433 34 47878877632 2 34789999999999999999999
Q ss_pred CcC-CCCCC-cHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecC
Q 013641 227 HGS-RMFDN-GAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLP 304 (439)
Q Consensus 227 Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~ 304 (439)
|+| .|..+ |||..+++++..|+.+... ...+.+++.+++| ..|+||++|++++++|+.
T Consensus 250 Hag~~P~~g~nAi~~aa~~i~~l~~~~~~-------------~~~~~~~g~i~~g-------~~n~iP~~a~~~~diR~~ 309 (434)
T 3ife_A 250 HPGTAKNKMRNATKLAMEFNGHLPVEEAP-------------EYTEGYEGFYHLL-------SLNGDVEQSKAYYIIRDF 309 (434)
T ss_dssp CGGGCTTTCBCHHHHHHHHHHTSCTTCSG-------------GGCCTTCCEEEEE-------EEEECSSEEEEEEEEEES
T ss_pred CCCCCcccchhHHHHHHHHHHhcccccCC-------------CcceeeeEEEEee-------eEeEecCeEEEEEEEecC
Confidence 998 69888 9999999999998765211 0123345566665 678999999999999999
Q ss_pred CCCCHHHHHHHHHHHhccc--CC---CceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCC
Q 013641 305 PTVDPDLIRRRIAEEWAPA--IR---NMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILAST 379 (439)
Q Consensus 305 ~~~~~~~i~~~i~~~~~~~--~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~ 379 (439)
+.++.+++.++|++++++. .. .+++++.. .+.|++..+..|+++++.+++++++.+ ..+.+....++
T Consensus 310 ~~~~~~~i~~~i~~~~~~~~~~~g~~~~~v~~~~-------~~~~~~~~~~~d~~l~~~~~~a~~~~G-~~~~~~~~~gg 381 (434)
T 3ife_A 310 DRKNFEARKNTIENIVKQMQEKYGQDAVVLEMND-------QYYNMLEKIEPVREIVDIAYEAMKSLN-IEPNIHPIRGG 381 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHCGGGEEEEEEE-------EECCTHHHHGGGTHHHHHHHHHHHHTT-CCCEECCBSSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEee-------cccchhccccCCHHHHHHHHHHHHHhC-CCCEEeecccC
Confidence 9999999999999888642 12 25555543 233331224567899999999999854 33344456789
Q ss_pred ccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhc
Q 013641 380 TDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 380 tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
+|+++|.+.|+|++.|||+.. .+|++||+++++++.+++++|+.++..+++
T Consensus 382 tD~~~~~~~GiP~~~~g~g~~---~~H~~~E~i~~~~l~~~~~~~~~~l~~la~ 432 (434)
T 3ife_A 382 TDGSQLSYMGLPTPNIFTGGE---NYHGKFEYVSVDVMEKAVQVIIEIARRFEE 432 (434)
T ss_dssp CHHHHHHHTTCCCCEECCSEE---STTSTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHhhCCCcEEEeCCCCC---CCcCCceeecHHHHHHHHHHHHHHHHHHhh
Confidence 999999988999999999764 699999999999999999999999999875
No 18
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=8.7e-50 Score=403.55 Aligned_cols=370 Identities=15% Similarity=0.115 Sum_probs=272.3
Q ss_pred CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEe--------------------------------
Q 013641 26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEF-------------------------------- 73 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~-------------------------------- 73 (439)
...+++++++++|+++|+++ ++|.++++||+++|+++|+++++...
T Consensus 11 ~~~~~~~~~~~~lh~~Pe~~--~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 88 (445)
T 3io1_A 11 QLAPSMTQWRRDFHLHAESG--WLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERW 88 (445)
T ss_dssp TTHHHHHHHHHHHHHTCCCT--TCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTT
T ss_pred HHHHHHHHHHHHHHhCCCCC--CcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccccccccc
Confidence 45789999999999999997 89999999999999999998775310
Q ss_pred ---c-CCccEEEEEEcCCCCCCCcEEEeeecccccCCC-CCCCCCCCce---eEeCCCCEEEecCcccchhHHHHHHHHH
Q 013641 74 ---V-PNKPILLLTWPGSDPSLPSILFNSHLDSVPAEP-DKWSHPPFSA---FHSPETGQIFARGSQDDKCIAIQYIEAI 145 (439)
Q Consensus 74 ---~-~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~~-~~w~~~Pf~~---~~~~~dg~i~GrG~~D~k~~~aa~l~a~ 145 (439)
. ++++||+++++|..+ +|+|+|+||||+||+.+ ..|+++||.. ... +|++||||+ | ++++++|.|+
T Consensus 89 ~~~~~~~~~~vva~~~~~~~-g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~--~G~~h~cGh-d--~~~a~~l~aa 162 (445)
T 3io1_A 89 LPAFEGGFAGVVATLDTGRP-GPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCN--AGMMHACGH-D--GHTAIGLGLA 162 (445)
T ss_dssp GGGGTTTCCCEEEEEECSSC-CCEEEEEEECCCCCC---------------------------CTT-C--THHHHHHHHH
T ss_pred cccccCCCCEEEEEEeCCCC-CCEEEEEEecCCcCCCCCCCCCcCccccccccCC--CCceEecCc-h--HHHHHHHHHH
Confidence 0 146899999987543 58999999999999976 6899999986 345 899999998 5 8999999999
Q ss_pred HHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccccccceEEEEecCCcCCCCcceEEeeccc---eEEEEEEEe
Q 013641 146 RNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRS---PWHLIIRAK 222 (439)
Q Consensus 146 ~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G---~~~~~v~v~ 222 (439)
+.|+ +.+.+++++|.|+|+++||.+ .|++.+++++.++++|++++++.+...|.+ .+.++.+| ..+++|+++
T Consensus 163 ~~L~-~~~~~~~g~v~l~f~p~EE~~--~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g--~i~~~~~g~~a~~~~~i~v~ 237 (445)
T 3io1_A 163 HVLK-QYAAQLNGVIKLIFQPAEEGT--RGARAMVAAGVVDDVDYFTAIHIGTGVPAG--TVVCGGDNFMATTKFDVQFS 237 (445)
T ss_dssp HHHH-HTGGGCCSEEEEEEESCTTTT--CHHHHHHHTTTTTTCSEEEEEEEEEEEETT--BEESCCCCBCEEEEEEEEEE
T ss_pred HHHH-hCcCcCCceEEEEEecccccc--chHHHHHHcCCccccceeEEEeccCCCCCC--eEEEecCCeeEEEEEEEEEE
Confidence 9999 877789999999999999954 699999998888778988888643222433 45555554 478999999
Q ss_pred eCCCCc-CCCCCC-cHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEe
Q 013641 223 GAPGHG-SRMFDN-GAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFD 300 (439)
Q Consensus 223 G~~~Hs-~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~ 300 (439)
|+++|+ +.|+.| |||..+++++..|+.+... ..+..+++++.++||. +.|+||++|+++++
T Consensus 238 Gk~~HaGs~P~~g~nAi~~aa~~i~~l~~l~~~-----------~~~~~~~~vg~i~gG~------~~NvIP~~a~~~~~ 300 (445)
T 3io1_A 238 GVAAHAGGKPEDGRNALLAAAQAALGLHAIPPH-----------SAGASRVNVGVMQAGT------GRNVVPSSALLKVE 300 (445)
T ss_dssp CCCSSTTCCGGGCCCHHHHHHHHHHHHHTCCCB-----------TTBCEEEEEEEEEECS------CTTSCCCEEEEEEE
T ss_pred eecCCCCCCCcCCcCHHHHHHHHHHHHHHHHhh-----------cCCCeEEEEEEEecCC------CCceeCCeEEEEEE
Confidence 999998 589988 9999999999999987421 1123789999999987 99999999999999
Q ss_pred eecCCCCCHHHHHHHHHHHhccc--CCCceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCC---cccc
Q 013641 301 ARLPPTVDPDLIRRRIAEEWAPA--IRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLG---KPEI 375 (439)
Q Consensus 301 iR~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~---~~~~ 375 (439)
+|+.+.++.+++.++|+++++.. ..+++++++.. ..+|+ +.+|.++++.+.+++++.++..+ ....
T Consensus 301 iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~------~~~~~---~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~ 371 (445)
T 3io1_A 301 TRGESEAINQYVFERAQHVVAGAAAMYEARYELRMM------GAATA---SAPSPAWVDYLREQAARVPGVQQAVDRIAA 371 (445)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE------EEECC---CCCCHHHHHHHHHHHHHSTTCCBCBSSCCC
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe------cCCCC---cCCCHHHHHHHHHHHHHhcCCccceecCCC
Confidence 99999999999999999888642 35666766652 23333 34578899999999999865431 1122
Q ss_pred ccCCccHHHHHHh----CCCE--EEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhcccC
Q 013641 376 LASTTDARYMRQL----GIPV--LGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSFVE 436 (439)
Q Consensus 376 ~~~~tD~~~~~~~----gip~--v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~~~~ 436 (439)
..+++|+++|.+. |.|. +.|||+... ..|+|||++++++|..++++|+.++.++++.+.
T Consensus 372 ~~g~~D~~~~~~~~P~~gg~~~~~~~G~~~~~--~~H~~~E~i~~~~l~~g~~~~~~~~~~~~~~~~ 436 (445)
T 3io1_A 372 PAGSEDATLMMARVQARGGLASYMIFGTELSA--GHHNEKFDFDESVMAVAVETLARVALNFPWQRG 436 (445)
T ss_dssp CCBCCTHHHHHHHHHHTTCEEEEEEEEEEC-------------CCCHHHHHHHHHHHHHHTCCSCC-
T ss_pred CccHHHHHHHHHHhcccCCceEEEEEeCCCCC--CCCCCCCcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 4789999999765 2223 578886432 699999999999999999999999999876543
No 19
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=3.3e-48 Score=396.49 Aligned_cols=367 Identities=18% Similarity=0.230 Sum_probs=250.5
Q ss_pred CCchhHHHHHHhHhcCcCCCCCC----------CCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEc-CCCCCCCcE
Q 013641 26 HEEREPITRFKQYLRFNTAHPNP----------NYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWP-GSDPSLPSI 94 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~----------~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~-g~~~~~~~v 94 (439)
.+.+++++++++|++|||+|... ++.++++||+++|+++||+++.+ . |+++... |. ++|+|
T Consensus 31 ~~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~----~--~~~~~~~~g~--~~~~i 102 (492)
T 3khx_A 31 QYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDV----D--HIAGRIEAGK--GNDVL 102 (492)
T ss_dssp TTHHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE----T--TTEEEEEEEC--SSCEE
T ss_pred HhHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEe----C--CEEEEEEeCC--CCCEE
Confidence 46789999999999999998321 12499999999999999998765 2 3344332 43 35899
Q ss_pred EEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCccc
Q 013641 95 LFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFD 174 (439)
Q Consensus 95 ll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~ 174 (439)
+|+|||||||+++ .|+.+||++.++ ||+|||||++|||++++++|.|++.|+ +.+.+++++|.|+|+++||.|+ .
T Consensus 103 ~l~~H~D~vp~~~-~w~~~Pf~~~~~--~g~l~GrG~~D~Kg~~a~~l~a~~~l~-~~~~~~~~~i~~~~~~~EE~g~-~ 177 (492)
T 3khx_A 103 GILCHVDVVPAGD-GWDSNPFEPVVT--EDAIIARGTLDDKGPTIAAYYAIKILE-DMNVDWKKRIHMIIGTDEESDW-K 177 (492)
T ss_dssp EEEEECCCCCCCS-CCSSCTTSCEEC--SSEEESTTTTTTHHHHHHHHHHHHHHH-HTTCCCSSEEEEEEECCTTCCC-C
T ss_pred EEEEeccCCCCCC-CcccCCCceEEE--CCEEEecCCccCcHHHHHHHHHHHHHH-HcCCCCCCCEEEEEECCccCCC-c
Confidence 9999999999975 899999999998 999999999999999999999999999 8888889999999999999998 8
Q ss_pred CHHHHHhcccccccceEEEEec-------------------------------------CC---cCCCCcce-E------
Q 013641 175 GMAKFVESNEFRELNVGFVMDE-------------------------------------GQ---ASTNDDFR-V------ 207 (439)
Q Consensus 175 G~~~~~~~~~~~~~~~~~v~~~-------------------------------------g~---~~p~~~~~-i------ 207 (439)
|+++++++.. ..++.++.|. |. ..|+. .. +
T Consensus 178 g~~~~~~~~~--~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~-~~aiv~ept~ 254 (492)
T 3khx_A 178 CTDRYFKTEE--MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDH-AEARVLVKEN 254 (492)
T ss_dssp TTSHHHHHSC--CCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCE-EEEEEEECSC
T ss_pred CHHHHHHhCc--CCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCch-HheEeecccc
Confidence 9999998642 1233222221 10 01110 00 1
Q ss_pred -------------EeeccceE-----EEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccc--cchhHHHHhc-----
Q 013641 208 -------------FYADRSPW-----HLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFR--ESQFDVVKAG----- 261 (439)
Q Consensus 208 -------------~~~~~G~~-----~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~--~~~~~~~~~~----- 261 (439)
..+.+|.. +++|+++|+++|++.|+.| |||..+++++.+|.... ...++.+...
T Consensus 255 ~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~ 334 (492)
T 3khx_A 255 MTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSD 334 (492)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCT
T ss_pred hHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCC
Confidence 12447888 8999999999999999988 99999999998886200 0011111000
Q ss_pred ----c-----ccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEe
Q 013641 262 ----R-----AANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEII 332 (439)
Q Consensus 262 ----~-----~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~ 332 (439)
. ......+|+|++.+++| . |++|++.+|+|+++..+.+++.++|++.+++ .++++++.
T Consensus 335 ~~~~l~i~~~d~~~G~~t~n~g~i~~g-------~----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~~--~g~~~~i~ 401 (492)
T 3khx_A 335 FGEKMGMKFHTDVMGDVTTNIGVITYD-------N----ENAGLFGINLRYPEGFEFEKAMDRFANEIQQ--YGFEVKLG 401 (492)
T ss_dssp TSGGGTCC-------CCEEEEEEEEEE-------T----TTCCEEEEEEEECTTCCHHHHHHHHHHHHGG--GTEEEEEE
T ss_pred CccccCCccccCCcCccEEeeeEEEEe-------c----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHHH--cCCEEEEe
Confidence 0 00112478888888876 2 8999999999999999999999999988863 45666665
Q ss_pred eccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCcc
Q 013641 333 EKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFL 412 (439)
Q Consensus 333 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i 412 (439)
. ...|+. ++.++++++.+.+++++..+..+.+...+|+||++++.. ++|.-.++|+.. ..+|++||++
T Consensus 402 ~-------~~~p~~--~~~d~~lv~~l~~a~~~~~G~~~~~~~~gggtDa~~~~~-~v~~G~~fPg~~--~~~H~~dE~v 469 (492)
T 3khx_A 402 K-------VQPPHY--VDKNDPFVQKLVTAYRNQTNDMTEPYTIGGGTYARNLDK-GVAFGAMFSDSE--DLMHQKNEYI 469 (492)
T ss_dssp E-------EECCBC--CGGGCHHHHHHHHHHHTTCC--------------------------------------CCSCEE
T ss_pred c-------cCCcee--cCCCcHHHHHHHHHHHHHhCCCCeEEeeehhHHHHHhhC-ceEECCcCCCCC--CCCCCCccCc
Confidence 3 234443 345789999999999998665546667789999999975 343322225543 2799999999
Q ss_pred chHhHHHHHHHHHHHHHHhhc
Q 013641 413 KDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 413 ~~~~l~~~~~~~~~~l~~~~~ 433 (439)
+++++.+++++|+.++..+++
T Consensus 470 ~i~~l~~~~~i~~~~l~~l~~ 490 (492)
T 3khx_A 470 TKKQLFNATSIYLEAIYSLCV 490 (492)
T ss_dssp EHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999875
No 20
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=2.2e-48 Score=397.29 Aligned_cols=362 Identities=12% Similarity=0.140 Sum_probs=285.3
Q ss_pred CCCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCC--CCCCcEEEeeeccc
Q 013641 25 SHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSD--PSLPSILFNSHLDS 102 (439)
Q Consensus 25 ~~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~--~~~~~vll~aH~Dt 102 (439)
..+.+++++++++|++|||+| ++|.++++||.++|+++|++++.+ ..+||+++++|+. .++|+|+|+|||||
T Consensus 10 ~~~~~~~~~~~~~L~~ips~s--~~e~~~~~~l~~~l~~~G~~v~~~----~~~nv~a~~~g~~g~~~~~~v~l~aH~D~ 83 (490)
T 3mru_A 10 TLSPAPLWQFFDKICSIPHPS--KHEEALAQYIVTWATEQGFDVRRD----PTGNVFIKKPATPGMENKKGVVLQAHIDM 83 (490)
T ss_dssp GSSSHHHHHHHHHHHHSCCBT--TCCTTHHHHHHHHHHHTTCEEEEC----TTCCEEEEECCCTTCTTCCCEEEEEECCB
T ss_pred ccCHHHHHHHHHHHhCCCCCC--CCHHHHHHHHHHHHHHcCCEEEEc----CCCeEEEEEcCCCCCCCCCeEEEEeccCC
Confidence 357789999999999999997 789999999999999999987754 4679999998752 24689999999999
Q ss_pred ccCCC----CCCCCCCCceeEeCCCCEEEecCcc---cchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccC
Q 013641 103 VPAEP----DKWSHPPFSAFHSPETGQIFARGSQ---DDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDG 175 (439)
Q Consensus 103 vp~~~----~~w~~~Pf~~~~~~~dg~i~GrG~~---D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G 175 (439)
||..+ ..|+.+||.+.++ ||++||||++ |||+++|++|.++ + +.+ .++++|.|+|+++||.|+ .|
T Consensus 84 vp~~~~~~~~~w~~~p~~~~~~--~g~l~g~G~~lgaD~k~g~a~~l~~l---~-~~~-~~~~~v~~~~~~~EE~g~-~G 155 (490)
T 3mru_A 84 VPQKNEDTDHDFTQDPIQPYID--GEWVTAKGTTLGADNGIGMASCLAVL---A-SKE-IKHGPIEVLLTIDEEAGM-TG 155 (490)
T ss_dssp CCCBCTTSCCCTTTCCCCEEEE--TTEEEETTBCCCHHHHTTHHHHHHHH---H-CSS-CCCCSEEEEEESCSSSTT-GG
T ss_pred CCCCCCCcccccccCCceEEee--CCeEecCCCccCCCCHHHHHHHHHHH---H-hCC-CCCCCEEEEEEccccccc-Hh
Confidence 99975 2799999999999 9999999996 9999999999875 3 333 468999999999999997 89
Q ss_pred HHHHHhcccccccceEEEEecCCcCCCCcce----------------EEeeccceEEEEEEEee-CCCCcCC-CCCC--c
Q 013641 176 MAKFVESNEFRELNVGFVMDEGQASTNDDFR----------------VFYADRSPWHLIIRAKG-APGHGSR-MFDN--G 235 (439)
Q Consensus 176 ~~~~~~~~~~~~~~~~~v~~~g~~~p~~~~~----------------i~~~~~G~~~~~v~v~G-~~~Hs~~-p~~g--n 235 (439)
++.++++ .+ ..++.+++|.+. .+... ...+.+|..+++|+++| +++|++. |+.| |
T Consensus 156 a~~~~~~-~~-~~~~~~~~d~~~---~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~n 230 (490)
T 3mru_A 156 AFGLEAG-WL-KGDILLNTDSEQ---EGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGN 230 (490)
T ss_dssp GGTCCSS-SC-CSSEEEECCCCC---TTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCC
T ss_pred HHHhhhc-cc-CCCEEEEcCCCC---CCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcC
Confidence 9988864 33 357777776431 11110 12456799999999999 8999995 7765 9
Q ss_pred HHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHH
Q 013641 236 AMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRR 315 (439)
Q Consensus 236 ai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~ 315 (439)
||..|++++..|++. .+++++.++||. +.|+||++|++.+++|..+.+..+++.++
T Consensus 231 ai~~~~~~l~~l~~~------------------~~~~v~~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~~~~~ 286 (490)
T 3mru_A 231 ANKLIGRFLAGHAQE------------------LDLRLVEFRGGS------LRNAIPREAFVTVALPAENQDKLAELFNY 286 (490)
T ss_dssp HHHHHHHHHHHHTTT------------------TTCEEEEEEECS------CTTEECCCEEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc------------------CcEEEEEEECCC------CCcccCCccEEEEEECcccHHHHHHHHHH
Confidence 999999999999751 247889999997 99999999999999998776666666666
Q ss_pred HHHHhcc----cCCCceEEEee----------------------------------------------------------
Q 013641 316 IAEEWAP----AIRNMSYEIIE---------------------------------------------------------- 333 (439)
Q Consensus 316 i~~~~~~----~~~~~~~~~~~---------------------------------------------------------- 333 (439)
+.+.++. ....+++++..
T Consensus 287 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~n~gv~~~~~~~~~~~~ 366 (490)
T 3mru_A 287 YTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLC 366 (490)
T ss_dssp HHHHHHHHHTTTCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHhhccCCCeEEEEEecCCccccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEEEEEEEEEeCCEEEEEE
Confidence 6554432 12222222221
Q ss_pred --cccc---------------------cc-CCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHh-
Q 013641 334 --KGPI---------------------RD-YKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQL- 388 (439)
Q Consensus 334 --~~~~---------------------~~-~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~- 388 (439)
+.+. .+ ...+|++ .++.|+++++.+.++++++++..+.+....+++|+++|...
T Consensus 367 ~~R~~~~~~~~~i~~~l~~~~~~~g~~~~~~~~~p~~-~~~~d~~lv~~l~~a~~~~~G~~~~~~~~ggg~d~~~~~~~~ 445 (490)
T 3mru_A 367 LIRSLIDSGRSQVEGMLQSVAELAGAQIEFSGAYPGW-KPDADSEIMAIFRDMYEGIYGHKPNIMVIHAGLECGLFKEPY 445 (490)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHTTCEEEEEEEECCB-CCCTTCHHHHHHHHHHHTTSSSCCCCEEESSCCHHHHTTSSC
T ss_pred EcCCCCchHHHHHHHHHHHHHHHcCCeEEecCCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCeEEEEEecHHHHHHHHhC
Confidence 1000 00 0123443 25678999999999999997766577778899999999876
Q ss_pred -CCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhc
Q 013641 389 -GIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 389 -gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
++|++.|||+.. .+|+|||+++++++.++.++|.++|..+..
T Consensus 446 p~~~~v~fGp~~~---~~H~p~E~v~i~~l~~~~~~l~~~l~~l~~ 488 (490)
T 3mru_A 446 PNMDMVSFGPTIK---FPHSPDEKVKIDTVQLFWDQMVALLEAIPE 488 (490)
T ss_dssp TTCEEEECCCCEE---STTSTTCEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCEEEECCCCC---CCCCCCccccHHHHHHHHHHHHHHHHHhhh
Confidence 788999999864 599999999999999999999999998864
No 21
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=1.8e-48 Score=398.64 Aligned_cols=355 Identities=13% Similarity=0.156 Sum_probs=282.0
Q ss_pred CCCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCC-C-CCCCcEEEeeeccc
Q 013641 25 SHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGS-D-PSLPSILFNSHLDS 102 (439)
Q Consensus 25 ~~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~-~-~~~~~vll~aH~Dt 102 (439)
..+.+++++++++|++|||+| ++|.++++||+++|+++|++++.+ ..+||+++++|+ + +++|+|+|+||||+
T Consensus 7 ~~~~~~~~~~~~~l~~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~----~~~nv~a~~~g~~g~~~~~~i~l~aH~D~ 80 (487)
T 2qyv_A 7 SLQPKLLWQWFDQICAIPHPS--YKEEQLAQFIINWAKTKGFFAERD----EVGNVLIRKPATVGMENRKPVVLQAHLDM 80 (487)
T ss_dssp CSSSHHHHHHHHHHHHSCCBT--TCCHHHHHHHHHHHHHTTCEEEEC----TTCCEEEEECCCTTCTTBCCEEEEEESCB
T ss_pred ccCHHHHHHHHHHHHcCCCCC--CcHHHHHHHHHHHHHHcCCEEEEc----CCCcEEEEeCCCCCCCCCCeEEEEccCCc
Confidence 346789999999999999997 789999999999999999987654 357999999874 2 34589999999999
Q ss_pred ccCCCC----CCCCCCCceeEeCCCCEEEecCcc---cchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccC
Q 013641 103 VPAEPD----KWSHPPFSAFHSPETGQIFARGSQ---DDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDG 175 (439)
Q Consensus 103 vp~~~~----~w~~~Pf~~~~~~~dg~i~GrG~~---D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G 175 (439)
||.++. .|+.+||++.++ ||++||||++ |||++++++|.+++. .+ .++++|.|+|+++||.|+ .|
T Consensus 81 vp~~~~~~~~~w~~~p~~~~~~--dg~l~g~G~~lgaD~k~g~a~~l~a~~~----~~-~~~~~v~~~~~~~EE~g~-~G 152 (487)
T 2qyv_A 81 VPQANEGTNHNFDQDPILPYID--GDWVKAKGTTLGADNGIGMASALAVLES----ND-IAHPELEVLLTMTEERGM-EG 152 (487)
T ss_dssp CCC----------CCCCCEEEC--SSEEEETTBCCCHHHHHHHHHHHHHHHC----SS-SCCSSEEEEEESCTTTTC-HH
T ss_pred cCCCCCCCccccccCCeeEEee--CCEEEeCCCCcCCcCHHHHHHHHHHHHh----CC-CCCCCEEEEEEeccccCC-HH
Confidence 999863 899999999998 9999999997 999999999999863 23 367899999999999987 89
Q ss_pred HHHHHhcccccccceEEEEecCCcCCCCcceEEeeccce-----------------EEEEEEEee-CCCCcCCC-CC-C-
Q 013641 176 MAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSP-----------------WHLIIRAKG-APGHGSRM-FD-N- 234 (439)
Q Consensus 176 ~~~~~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~-----------------~~~~v~v~G-~~~Hs~~p-~~-g- 234 (439)
++.+++++ ++ .|+++++|.+ ....++++.+|. .+++|+++| +++|||.| +. +
T Consensus 153 a~~~~~~~-~~-~d~~~~~d~~-----~~~~i~~g~~g~~~~~~~~~~~~~~~~~g~~~~i~v~G~~~~Hsg~~~~~g~~ 225 (487)
T 2qyv_A 153 AIGLRPNW-LR-SEILINTDTE-----ENGEIYIGCAGGENADLELPIEYQVNNFEHCYQVVLKGLRGGHSGVDIHTGRA 225 (487)
T ss_dssp HHTCCSSC-CC-CSEEEECCCC-----CTTEEEEEECEEEEEEEEEECCEEECCCSEEEEEEEECCCCCBTTTTTTSCCC
T ss_pred HHHHHHhc-cC-CCEEEEEccC-----CCCeEEEeccCCcceeeeccccccccCCCeEEEEEEEccCCccCCcccccCCC
Confidence 99888754 43 6777766532 123455554443 779999999 89999987 44 3
Q ss_pred cHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEee-------------
Q 013641 235 GAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDA------------- 301 (439)
Q Consensus 235 nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~i------------- 301 (439)
|||..|++++..|+.+.. ..+++++.++||. ..|+||++|++.+++
T Consensus 226 nAi~~~~~~i~~l~~~~~---------------~~~~~v~~i~gG~------~~NvIP~~a~~~~~~~~~~~~~~~~~~~ 284 (487)
T 2qyv_A 226 NAIKVLLRFLAELQQNQP---------------HFDFTLANIRGGS------IRNAIPRESVATLVFNGDITVLQSAVQK 284 (487)
T ss_dssp CHHHHHHHHHHHHHHHCT---------------TCCEEEEEEEEES------CTTBCCCCEEEEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhccC---------------CCcEEEEEEeCCC------cCcccCCceEEEEEecCCHHHHHHHHHH
Confidence 999999999999976421 2468899999997 999999999999999
Q ss_pred ---------------------------ecCCCCCHHHHHHHHHHHhcc--------------------------------
Q 013641 302 ---------------------------RLPPTVDPDLIRRRIAEEWAP-------------------------------- 322 (439)
Q Consensus 302 ---------------------------R~~~~~~~~~i~~~i~~~~~~-------------------------------- 322 (439)
|++|.++.+.+.+.|++++..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~nl~~~~~~~~~~~~~~ 364 (487)
T 2qyv_A 285 FADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTM 364 (487)
T ss_dssp HHHHHHHHTTTTCTTCEEEEEECCCCSEEECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEEEEEEEEECSSEEEEEE
T ss_pred HHHHHHHHhccCCCCeEEEEEeccccccccCHHHHHHHHHHHHhCCCcceeeccccCCceEeccceEEEEEcCCeEEEEE
Confidence 888878888888877665321
Q ss_pred ---------------------cCCCceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCcc
Q 013641 323 ---------------------AIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTD 381 (439)
Q Consensus 323 ---------------------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD 381 (439)
...++++++.. .++|+. .+.|+++++.+.+++++..+..+.+....+++|
T Consensus 365 ~~R~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-------~~p~~~--~~~d~~l~~~~~~~~~~~~G~~~~~~~~~gg~D 435 (487)
T 2qyv_A 365 LVRSLIESGKSYVASLLKSLASLAQGNINLSG-------DYPGWE--PQSHSDILDLTKTIYAQVLGTDPEIKVIHAGLE 435 (487)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHTCEEEEEE-------EECCBC--CCSCCHHHHHHHHHHHHHHSSCCEEEEESSCCT
T ss_pred EccCCCHHHHHHHHHHHHHHHHHcCceEEECC-------CCCCCC--CCCCCHHHHHHHHHHHHHhCCCCeEEEEecccc
Confidence 01234444442 233333 456899999999999997666545566779999
Q ss_pred HHHHHHh--CCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhc
Q 013641 382 ARYMRQL--GIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 382 ~~~~~~~--gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
+++|.+. |+|++.|||+.. .+|+|||+++++++.+++++|+.++.++++
T Consensus 436 ~~~~~~~~pg~~~v~~Gp~~~---~~H~~~E~v~~~~l~~~~~~~~~~l~~l~~ 486 (487)
T 2qyv_A 436 CGLLKKIYPTIDMVSIGPTIR---NAHSPDEKVHIPAVETYWKVLTGILAHIPS 486 (487)
T ss_dssp HHHHHHHCTTSEEEECCCCEE---STTSTTCEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHhhCCCCCEEEECCCCC---CCCCCCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 9999875 899999999652 699999999999999999999999998864
No 22
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=1.1e-47 Score=385.61 Aligned_cols=359 Identities=17% Similarity=0.164 Sum_probs=286.1
Q ss_pred hhHHHHHHhHhcCcCCCCCC--------CCchHHHHHHHHHHhcCCc-eEEEEecCCccEEEEEEcCCCC-CCCcEEEee
Q 013641 29 REPITRFKQYLRFNTAHPNP--------NYTAPVSFLISQAQSIGLQ-FKTLEFVPNKPILLLTWPGSDP-SLPSILFNS 98 (439)
Q Consensus 29 ~~~i~~l~~lv~ips~s~~~--------~e~~~~~~l~~~l~~~G~~-~~~~~~~~~~~nvi~~~~g~~~-~~~~vll~a 98 (439)
++++++|++|++|||+|..+ +|.++++||+++|+++|++ ++.+ ..+||+++++|+++ ++|+|+|+|
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~----~~~nvia~~~g~~~~~~~~i~l~a 77 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS----EKGTLMATLPANVEGDIPAIGFIS 77 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC----TTCCEEEEECCSSCSCCCCEEEEE
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC----CCceEEEEECCCCCCCCCceEEEE
Confidence 57899999999999998533 5789999999999999998 5543 46899999987542 358999999
Q ss_pred ecccccCCCCCCCCCCC-----cee-Ee-------------------CCCCEEEecCc----ccchhHHHHHHHHHHHHH
Q 013641 99 HLDSVPAEPDKWSHPPF-----SAF-HS-------------------PETGQIFARGS----QDDKCIAIQYIEAIRNLI 149 (439)
Q Consensus 99 H~Dtvp~~~~~w~~~Pf-----~~~-~~-------------------~~dg~i~GrG~----~D~k~~~aa~l~a~~~l~ 149 (439)
||||||..+ .|..+|| .+. +. ..|+++||||+ +|||++++++|.|++.|+
T Consensus 78 H~D~Vp~~~-~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~ 156 (417)
T 1fno_A 78 HVDTSPDFS-GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLK 156 (417)
T ss_dssp ECCBCTTSC-CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred eccccCCCC-CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHH
Confidence 999999985 6988885 432 20 12679999997 999999999999999999
Q ss_pred HhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcC
Q 013641 150 LVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGS 229 (439)
Q Consensus 150 ~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~ 229 (439)
+.+ .++++|+|+|+++||.| .|++.+++++ + ..|++++++.+ |. ..++++.+|..+++|+++|+++|++
T Consensus 157 -~~~-~~~~~v~~~~~~~EE~g--~Ga~~~~~~~-~-~~d~~i~~d~~---~~--g~i~~~~~g~~~~~i~~~G~~~Hs~ 225 (417)
T 1fno_A 157 -GNP-IPHGDIKVAFTPDEEVG--KGAKHFDVEA-F-GAQWAYTVDGG---GV--GELEFENFNAASVNIKIVGNNVHPG 225 (417)
T ss_dssp -SSS-CCCCCEEEEEESCGGGT--CTTTTCCHHH-H-CCSEEEECCCC---ST--TBEECCBCEEEEEEEEEECBCCCGG
T ss_pred -hCC-CCCCcEEEEEEeccccC--CChhhhchhh-c-CCCEEEEeCCC---Cc--CeeEEecCCceeEEEEEEeeccCCC
Confidence 877 68899999999999987 5887776443 3 36777777643 43 3578889999999999999999999
Q ss_pred -CCCCC-cHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCC
Q 013641 230 -RMFDN-GAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTV 307 (439)
Q Consensus 230 -~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~ 307 (439)
.|+.+ |||..|++++..|+.+.... . ......+++++.++|| |++|++.+++|+.+.+
T Consensus 226 ~~p~~g~nAi~~~a~~i~~l~~~~~~~---~-----~~~~~~~~~v~~i~gG------------p~~a~~~~d~R~~~~~ 285 (417)
T 1fno_A 226 TAKGVMVNALSLAARIHAEVPADEAPE---T-----TEGYEGFYHLASMKGT------------VDRAEMHYIIRDFDRK 285 (417)
T ss_dssp GCTTTCBCHHHHHHHHHHTSCTTSSGG---G-----CCTTCCEEEEEEEEEC------------SSEEEEEEEEEESSHH
T ss_pred CCccccCCHHHHHHHHHHhhhccCCcc---c-----ccccccEEEEEEEeec------------cCeEEEEEEEeCCCHH
Confidence 58888 99999999999987753211 0 0112357888888764 7999999999999999
Q ss_pred CHHHHHHHHHHHhccc--CCC----ceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCcc
Q 013641 308 DPDLIRRRIAEEWAPA--IRN----MSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTD 381 (439)
Q Consensus 308 ~~~~i~~~i~~~~~~~--~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD 381 (439)
+.+++.++|++.++.. ..+ +++++.. .+.++...+..|+++++.+.+++++. +..+.+....+++|
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~~~~~~ggtD 357 (417)
T 1fno_A 286 QFEARKRKMMEIAKKVGKGLHPDCYIELVIED-------SYYNMREKVVEHPHILDIAQQAMRDC-HITPEMKPIRGGTD 357 (417)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTCCEEEEEEE-------EECCCHHHHHTSTHHHHHHHHHHHHT-TCCCBCCCBSSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceEEEEEec-------cccchhccccCCCHHHHHHHHHHHHc-CCCceeccceeccc
Confidence 9999999999888642 122 5555543 12222112346789999999999995 43334556678999
Q ss_pred HHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhcc
Q 013641 382 ARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSF 434 (439)
Q Consensus 382 ~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~~ 434 (439)
++++...|+|++.|||+.. .+|++||+++++++.+++++|+.++..+++.
T Consensus 358 ~~~~~~~gip~v~~G~~~~---~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~~ 407 (417)
T 1fno_A 358 GAQLSFMGLPCPNLFTGGY---NYHGKHEFVTLEGMEKAVQVIVRIAELTAKR 407 (417)
T ss_dssp HHHHTTTTCCCCEECCSEE---STTSTTCEEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHhHHhcCCCEEEEcCCCC---CCCCcccccCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999888999999999864 5899999999999999999999999998754
No 23
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.2e-46 Score=383.74 Aligned_cols=369 Identities=15% Similarity=0.218 Sum_probs=275.6
Q ss_pred CCchhHHHHHHhHhcCcCCCCCC----------CCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEE
Q 013641 26 HEEREPITRFKQYLRFNTAHPNP----------NYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSIL 95 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~----------~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vl 95 (439)
.+.+++++++++|++|||+|... ++.++++||+++|+++|++++.+ +..++++.+ |. ++|+|+
T Consensus 11 ~~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~----~~~~~~~~~-g~--~~~~i~ 83 (470)
T 1lfw_A 11 AKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF----ANYAGRVNF-GA--GDKRLG 83 (470)
T ss_dssp TTHHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE----TTTEEEEEE-CC--CSSEEE
T ss_pred HhHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe----cCeEEEEEe-CC--CCCeEE
Confidence 45789999999999999998321 23689999999999999988754 346788888 54 358999
Q ss_pred EeeecccccCCCCCCCCCCCceeE-eCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCccc
Q 013641 96 FNSHLDSVPAEPDKWSHPPFSAFH-SPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFD 174 (439)
Q Consensus 96 l~aH~Dtvp~~~~~w~~~Pf~~~~-~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~ 174 (439)
|+|||||||+++ .|+.+||++.+ + ||++||||++|||++++++|.|++.|+ +.+.+++++|.|+|+++||.|+ .
T Consensus 84 l~~H~D~vp~~~-~w~~~Pf~~~~~~--~g~l~grG~~D~K~~~a~~l~a~~~l~-~~~~~~~~~i~~i~~~~EE~g~-~ 158 (470)
T 1lfw_A 84 IIGHMDVVPAGE-GWTRDPFKMEIDE--EGRIYGRGSADDKGPSLTAYYGMLLLK-EAGFKPKKKIDFVLGTNEETNW-V 158 (470)
T ss_dssp EEEECCBCCCCS-CCSSCTTSCEECT--TCEEESTTSSSSHHHHHHHHHHHHHHH-HHTCCCSSEEEEEEESCTTTTC-H
T ss_pred EEEeecccCCCC-CccCCCcceeEee--CCEEECCCcccChHHHHHHHHHHHHHH-HcCCCCCCCEEEEEecCcccCC-c
Confidence 999999999985 89999999998 8 999999999999999999999999999 8888889999999999999987 8
Q ss_pred CHHHHHhcccccc----cceE--EEEec-----------CC------------------cCCCCcceEEe----------
Q 013641 175 GMAKFVESNEFRE----LNVG--FVMDE-----------GQ------------------ASTNDDFRVFY---------- 209 (439)
Q Consensus 175 G~~~~~~~~~~~~----~~~~--~v~~~-----------g~------------------~~p~~~~~i~~---------- 209 (439)
|++.++++..... .|.. +++.. +. ..|. ...+.+
T Consensus 159 G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~-~~~~~~~~~~~~~~~~ 237 (470)
T 1lfw_A 159 GIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQ-VTRATISGPDLEAVKL 237 (470)
T ss_dssp HHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCS-EEEEEEECSCHHHHHH
T ss_pred cHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCcceeeeecCCcCCcccc-cceEEecccchHHHHH
Confidence 9999997643211 1211 11111 00 0000 000111
Q ss_pred ---------eccceE-----EEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccc--cchhHHHHhc-------c---
Q 013641 210 ---------ADRSPW-----HLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFR--ESQFDVVKAG-------R--- 262 (439)
Q Consensus 210 ---------~~~G~~-----~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~--~~~~~~~~~~-------~--- 262 (439)
+.+|.. +++|+++|+++|++.|+.+ ||+..+++++..|.... ....+.+... .
T Consensus 238 ~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~ 317 (470)
T 1lfw_A 238 AYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLG 317 (470)
T ss_dssp HHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTT
T ss_pred HHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccC
Confidence 235654 7999999999999999888 99999999998775100 0001111100 0
Q ss_pred ----ccCCCceEeeEeEEeecccCCCCcccccccCc-eEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeecccc
Q 013641 263 ----AANSEVISVNLVYLKAGIPSPTGFVMNMQPSE-AEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPI 337 (439)
Q Consensus 263 ----~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~-~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 337 (439)
......+|++++.++ .+|++ |++++++|+++.++.+++.++|++.++. ++++++.
T Consensus 318 ~~~~~~~~~~~t~~~g~i~------------~~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~---g~~v~~~----- 377 (470)
T 1lfw_A 318 IFHHDDLMGDLASSPSMFD------------YEHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG---ILDVTYN----- 377 (470)
T ss_dssp CCCEETTTEECEEEEEEEE------------EETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT---TEEEECS-----
T ss_pred CcccccccccceEEEEEEE------------EcCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC---CeEEEEE-----
Confidence 000012455555554 46899 9999999999999999999999998864 5554433
Q ss_pred ccCCCCCccccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCC-CCCCCCCCCCCccchHh
Q 013641 338 RDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMA-NTPILLHDHNEFLKDTV 416 (439)
Q Consensus 338 ~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~-~~~~~~H~~nE~i~~~~ 416 (439)
..+|++ .++.|+++++.+.+++++..+..+.+....+++|++++. |++.|||+. +....+|+|||++++++
T Consensus 378 ---~~~~~~-~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~g~~d~~~~~----~~v~~G~~~pg~~~~~H~~~E~i~~~~ 449 (470)
T 1lfw_A 378 ---GFEEPH-YVPGSDPMVQTLLKVYEKQTGKPGHEVVIGGGTYGRLFE----RGVAFGAQPENGPMVMHAANEFMMLDD 449 (470)
T ss_dssp ---CCBCCE-ECCTTCHHHHHHHHHHHHHHCCCCCEEEESSCCGGGGST----TCEECCEECTTCCCCTTSTTCEEEHHH
T ss_pred ---eCCCce-eeCCCCHHHHHHHHHHHHHcCCCCceeeecCHhHHHhCC----CeEEECCCCCCCCCCCCCCCcceEHHH
Confidence 233333 245689999999999999766544555667899999885 678999753 21237999999999999
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 013641 417 FLKGVEVYESVISSLSSFV 435 (439)
Q Consensus 417 l~~~~~~~~~~l~~~~~~~ 435 (439)
+.+++++|+.++.++++..
T Consensus 450 l~~~~~~~~~~~~~l~~~~ 468 (470)
T 1lfw_A 450 LILSIAIYAEAIYELTKDE 468 (470)
T ss_dssp HHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 9999999999999998653
No 24
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=2.2e-43 Score=359.43 Aligned_cols=349 Identities=16% Similarity=0.159 Sum_probs=275.9
Q ss_pred CCCchhHHHHHHhH-hcCcCCC-----C----------CCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCC
Q 013641 25 SHEEREPITRFKQY-LRFNTAH-----P----------NPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSD 88 (439)
Q Consensus 25 ~~~~~~~i~~l~~l-v~ips~s-----~----------~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~ 88 (439)
..+.++++++|++| ++|||+| . +++|.++++||+++|+++|++++.. ..+||+++++|++
T Consensus 28 ~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d----~~gnvia~~~g~~ 103 (474)
T 2v8h_A 28 SIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD----KIGNMFAVYPGKN 103 (474)
T ss_dssp CCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB----TTCCEEEEECCSS
T ss_pred cCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe----cCceEEEEECCCC
Confidence 47789999999999 9999985 1 2468899999999999999987753 4578999998765
Q ss_pred CCCCcEEEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCc
Q 013641 89 PSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDE 168 (439)
Q Consensus 89 ~~~~~vll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~E 168 (439)
+ +++|+|+|||||||+++ | .|+|++++++|.|++.|+ +.+.+++++|.|+|+++|
T Consensus 104 ~-~~~i~l~~H~DtVp~~g--~---------------------~D~k~gvaa~L~a~~~L~-~~~~~~~~~v~lif~~dE 158 (474)
T 2v8h_A 104 G-GKPTATGSHLDTQPEAG--K---------------------YDGILGVLAGLEVLRTFK-DNNYVPNYDVCVVVWFNA 158 (474)
T ss_dssp C-CSCEEEEECCCCCSSBC--S---------------------STTHHHHHHHHHHHHHHH-HHTCCCSSCEEEEECTTC
T ss_pred C-CCeEEEEEecccCCCCC--C---------------------cCCHHHHHHHHHHHHHHH-HcCCCCCCCEEEEEECCc
Confidence 4 36999999999999852 3 299999999999999999 888888999999999999
Q ss_pred ccC----cccCHHHHHhcc--------------------------cc----------cccceEEEEec--CCc-C-CCCc
Q 013641 169 EIG----GFDGMAKFVESN--------------------------EF----------RELNVGFVMDE--GQA-S-TNDD 204 (439)
Q Consensus 169 E~g----~~~G~~~~~~~~--------------------------~~----------~~~~~~~v~~~--g~~-~-p~~~ 204 (439)
|.+ +..|++.+.+.. .+ .+++..+.++. |.. . ....
T Consensus 159 E~~~~~~g~~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~ 238 (474)
T 2v8h_A 159 EGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKA 238 (474)
T ss_dssp SCSSSSCTTHHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCS
T ss_pred cCCCCCCCcccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCc
Confidence 983 236888886410 01 12333333321 100 0 0013
Q ss_pred ceEEeeccceEEEEEEEeeCCCCcCC-CC-CC-cHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEeec-c
Q 013641 205 FRVFYADRSPWHLIIRAKGAPGHGSR-MF-DN-GAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAG-I 280 (439)
Q Consensus 205 ~~i~~~~~G~~~~~v~v~G~~~Hs~~-p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gg-~ 280 (439)
..++.+.+|..+++|+++|+++|+|. |+ .+ |||..+++++..|+.+... . .++++++.|+|| .
T Consensus 239 ~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~-----------~--~~t~~vg~i~gG~~ 305 (474)
T 2v8h_A 239 IGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQR-----------H--NGLFTCGIIDAKPY 305 (474)
T ss_dssp EEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHH-----------T--TCEEECCCEEEESC
T ss_pred ceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhh-----------c--CCEEEEEEEEecCC
Confidence 56788899999999999999999994 86 67 9999999999999764311 0 368999999987 5
Q ss_pred cCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc--C---CCceEEEeeccccccCCCCCccccCCCCChH
Q 013641 281 PSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA--I---RNMSYEIIEKGPIRDYKGRPLMTLTDDSNPW 355 (439)
Q Consensus 281 ~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~--~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 355 (439)
+.|+||++|++++++|+++.++.+++.++|++.++.. . .+++++++.. ..+|++ ..++++
T Consensus 306 ------~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~---~~d~~l 370 (474)
T 2v8h_A 306 ------SVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESETL------QVSPAV---NFHEVC 370 (474)
T ss_dssp ------CTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCCTTCCCEEEEEEE------EEECCE---ECCHHH
T ss_pred ------CCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhcccCCcEEEEEEe------cCCCCc---cCCHHH
Confidence 9999999999999999999999999999999888752 2 5666666542 233443 246899
Q ss_pred HHHHHHHHHHhCC-C-CCccccccCCccHHHHHHhCCCE-EEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhh
Q 013641 356 WSVFKRAVTSAGG-K-LGKPEILASTTDARYMRQLGIPV-LGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLS 432 (439)
Q Consensus 356 ~~~l~~a~~~~~~-~-~~~~~~~~~~tD~~~~~~~gip~-v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~ 432 (439)
++.+.+++++. + . .+.+....+++|+++|.+. +|+ +.|||+... .+|+|||+++++++.+++++|+.++.+++
T Consensus 371 ~~~~~~a~~~~-G~~~~~~~~~~~ggtD~~~~~~~-~P~~~~fgp~~~~--~~H~p~E~i~~~~l~~~~~~~~~~l~~l~ 446 (474)
T 2v8h_A 371 IECVSRSAFAQ-FKKDQVRQIWSGAGHDSCQTAPH-VPTSMIFIPSKDG--LSHNYYEYSSPEEIENGFKVLLQAIINYD 446 (474)
T ss_dssp HHHHHHHHHHH-SCGGGEEEEEESSCCTHHHHTTT-SCEEEEEECCGGG--CCSSTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCcceecCCcCCccHHHHHhh-CCEEEEEeCCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 4 3 3355567799999999876 888 688998542 69999999999999999999999999887
Q ss_pred cc
Q 013641 433 SF 434 (439)
Q Consensus 433 ~~ 434 (439)
+.
T Consensus 447 ~~ 448 (474)
T 2v8h_A 447 NY 448 (474)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 25
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=1.1e-43 Score=357.27 Aligned_cols=351 Identities=14% Similarity=0.117 Sum_probs=274.1
Q ss_pred CchhHHHHHHhHhcCcCCCCC--------CCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEee
Q 013641 27 EEREPITRFKQYLRFNTAHPN--------PNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNS 98 (439)
Q Consensus 27 ~~~~~i~~l~~lv~ips~s~~--------~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~a 98 (439)
+.++++++|++|++|||++.. ++|.++++||+++|+++|++++.+ ..+||+++++|++++.|+|+|++
T Consensus 7 ~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~----~~gnv~a~~~g~~~~~~~i~l~~ 82 (423)
T 1z2l_A 7 FRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFD----EVGNLYGRLNGTEYPQEVVLSGS 82 (423)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEEC----TTSCEEEEECCSSEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEe----cCCcEEEEEcCCCCCCCEEEEEE
Confidence 467899999999999999732 358899999999999999987654 34699999987643348999999
Q ss_pred ecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCc----cc
Q 013641 99 HLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGG----FD 174 (439)
Q Consensus 99 H~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~----~~ 174 (439)
||||||.+ |..|+|++++++|.|++.|+ +.+.+++++|.|+|+++||.+. ..
T Consensus 83 H~D~Vp~~-----------------------g~~D~k~g~a~~l~a~~~l~-~~~~~~~~~v~~i~~~~EE~~~~~~g~~ 138 (423)
T 1z2l_A 83 HIDTVVNG-----------------------GNLDGQFGALAAWLAIDWLK-TQYGAPLRTVEVVAMAEEEGSRFPYVFW 138 (423)
T ss_dssp ECCCCTTB-----------------------CSSTTHHHHHHHHHHHHHHH-HHHCSCSEEEEEEEESCSSCCSSSCSCH
T ss_pred ecCCCCCC-----------------------CccCCHHHHHHHHHHHHHHH-HcCCCCCCCEEEEEEcCccccccCCCcc
Confidence 99999974 23599999999999999999 8777889999999999999852 24
Q ss_pred CHHHHHh----cccc-----------------------------cccceEEEEecCC---cCCCC-cceEEeeccceEEE
Q 013641 175 GMAKFVE----SNEF-----------------------------RELNVGFVMDEGQ---ASTND-DFRVFYADRSPWHL 217 (439)
Q Consensus 175 G~~~~~~----~~~~-----------------------------~~~~~~~v~~~g~---~~p~~-~~~i~~~~~G~~~~ 217 (439)
|++.+.. +..+ .+++..+.++... .+|++ ...++.+.+|..++
T Consensus 139 Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~ 218 (423)
T 1z2l_A 139 GSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRY 218 (423)
T ss_dssp HHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEEEEECEEEEE
T ss_pred cHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEEeeEecceEE
Confidence 8888875 2110 0223333332110 01221 35678889999999
Q ss_pred EEEEeeCCCCcC-CCC-CC-cHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEeec-ccCCCCcccccccC
Q 013641 218 IIRAKGAPGHGS-RMF-DN-GAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAG-IPSPTGFVMNMQPS 293 (439)
Q Consensus 218 ~v~v~G~~~Hs~-~p~-~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gg-~~~~~g~~~n~iP~ 293 (439)
+|+++|+++|++ .|+ .+ |||..+++++..|+++... . .+.++++++.+++| . +.|+||+
T Consensus 219 ~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~----~-------~~~~~~~vg~i~gg~~------~~NvIP~ 281 (423)
T 1z2l_A 219 TVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR----M-------GDPLVLTFGKVEPRPN------TVNVVPG 281 (423)
T ss_dssp EEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH----H-------CTTCEEECCCEEEESC------CTTEECC
T ss_pred EEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh----c-------CCCceEEEEEEeecCC------cceeECC
Confidence 999999999999 685 67 9999999999999765321 1 11368899999987 5 9999999
Q ss_pred ceEEEEeeecCCCCCHHHHHHHHHHHhccc--CCCceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCCC
Q 013641 294 EAEAGFDARLPPTVDPDLIRRRIAEEWAPA--IRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLG 371 (439)
Q Consensus 294 ~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~ 371 (439)
+|++.+++|+.+.++.+++.++|++.++.. ..+++++++.. ..+|+. ..|+++++.+.+++++. +..+
T Consensus 282 ~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~------~~~~~~---~~~~~l~~~~~~~~~~~-g~~~ 351 (423)
T 1z2l_A 282 KTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLW------MDEEPV---PMNKELVATLTELCERE-KLNY 351 (423)
T ss_dssp EEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEE------EEECCE---ECCHHHHHHHHHHHHHT-TCCE
T ss_pred EEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe------cCCCCc---cCCHHHHHHHHHHHHHc-CCCe
Confidence 999999999999999999999998887642 24556555542 233333 23689999999999998 4433
Q ss_pred ccccccCCccHHHHHHhCCCE-EEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhccc
Q 013641 372 KPEILASTTDARYMRQLGIPV-LGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSSFV 435 (439)
Q Consensus 372 ~~~~~~~~tD~~~~~~~gip~-v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~~~ 435 (439)
.+....+++|+++|.+. +|+ +.|||+... .+|++||+++++++.+++++|+.++.++++..
T Consensus 352 ~~~~~~ggtD~~~~~~~-~p~~~~~~p~~~~--~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~ 413 (423)
T 1z2l_A 352 RVMHSGAGHDAQIFAPR-VPTCMIFIPSING--ISHNPAERTNITDLAEGVKTLALMLYQLAWQK 413 (423)
T ss_dssp EEEEESSCCTHHHHTTT-SCEEEEEECCGGG--CCSSTTCCCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EEecCCCcccHHHHHhh-CCEEEEEeCCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 44567789999999876 888 488887542 69999999999999999999999999997653
No 26
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=4.9e-43 Score=350.77 Aligned_cols=348 Identities=15% Similarity=0.091 Sum_probs=274.2
Q ss_pred CchhHHHHHHhHhcCcCCCC--------CCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEee
Q 013641 27 EEREPITRFKQYLRFNTAHP--------NPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNS 98 (439)
Q Consensus 27 ~~~~~i~~l~~lv~ips~s~--------~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~a 98 (439)
+.++++++|++|++|||.+. +++|.++++||.++|+++|++++.+ ..+||+++++|+++++|+|+|.|
T Consensus 3 ~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d----~~gnv~a~~~g~~~~~~~i~l~a 78 (408)
T 3n5f_A 3 QGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYED----AAGNLIGRKEGTNPDATVVLVGS 78 (408)
T ss_dssp CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEEC----TTCCEEEEECCSSTTSCEEEEEE
T ss_pred CHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEc----CCCCEEEEecCCCCCCCEEEEEe
Confidence 56899999999999999541 3679999999999999999988764 35699999988764469999999
Q ss_pred ecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccC----ccc
Q 013641 99 HLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIG----GFD 174 (439)
Q Consensus 99 H~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g----~~~ 174 (439)
|||+||.+ |..|+|+|++++|.+++.|+ +.+.+++++|.|+|+++||.+ +..
T Consensus 79 H~D~v~~~-----------------------g~~d~~~g~a~~l~~~~~l~-~~~~~~~~~i~~~~~~~EE~~~~~~g~~ 134 (408)
T 3n5f_A 79 HLDSVYNG-----------------------GCFDGPLGVLAGVEVVQTMN-EHGVVTHHPIEVVAFTDEEGARFRFGMI 134 (408)
T ss_dssp ESCCCTTB-----------------------CSSTTHHHHHHHHHHHHHHH-HTTCCCSSCEEEEEESCSSCTTTTCCCH
T ss_pred cCCCCCCC-----------------------CccCCHHHHHHHHHHHHHHH-HcCCCCCCCEEEEEEcCccccccCCCCc
Confidence 99999863 45699999999999999999 888789999999999999973 236
Q ss_pred CHHHHHh------------ccc---------------c-----c--ccceEEEEec--CCc-CC-CCcceEEeeccceEE
Q 013641 175 GMAKFVE------------SNE---------------F-----R--ELNVGFVMDE--GQA-ST-NDDFRVFYADRSPWH 216 (439)
Q Consensus 175 G~~~~~~------------~~~---------------~-----~--~~~~~~v~~~--g~~-~p-~~~~~i~~~~~G~~~ 216 (439)
|++.++. ++. + + +++..+.++. |.. ++ .....++.+.+|..+
T Consensus 135 Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~ 214 (408)
T 3n5f_A 135 GSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIW 214 (408)
T ss_dssp HHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEE
T ss_pred CHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEEEeccceE
Confidence 8888872 111 1 1 2343333332 100 01 113567888999999
Q ss_pred EEEEEeeCCCCc-CCC-CCC-cHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEeec-ccCCCCccccccc
Q 013641 217 LIIRAKGAPGHG-SRM-FDN-GAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAG-IPSPTGFVMNMQP 292 (439)
Q Consensus 217 ~~v~v~G~~~Hs-~~p-~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gg-~~~~~g~~~n~iP 292 (439)
++|+++|+++|+ +.| ..+ |||..+++++..|+.+.. .. . .++++++.+++| . +.|+||
T Consensus 215 ~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~~----~~-------~-~~~~~vg~i~gG~~------~~NvIP 276 (408)
T 3n5f_A 215 VKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEAR----RT-------G-TTVGTVGQLHVYPG------GINVIP 276 (408)
T ss_dssp EEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHHH----HH-------S-SCEEEEEEEEEESC------CTTEEC
T ss_pred EEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHHH----hc-------C-CcEEEEEEEEecCC------CCcCcC
Confidence 999999999999 579 477 999999999999987531 11 1 368999999987 5 999999
Q ss_pred CceEEEEeeecCCCCCHHHHHHHHHHHhcc--cCCCceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCC
Q 013641 293 SEAEAGFDARLPPTVDPDLIRRRIAEEWAP--AIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKL 370 (439)
Q Consensus 293 ~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~ 370 (439)
++|++.+++|+.+.++.+++.++|++.++. ...+++++++.. ..+|+. ..|.++++.+++++++.+ ..
T Consensus 277 ~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~------~~~p~~---~~d~~l~~~~~~a~~~~g-~~ 346 (408)
T 3n5f_A 277 ERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERL------QEMPPV---LCSDEVKRAAEAACQKLG-YP 346 (408)
T ss_dssp SEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEE------EEECCE---ECCHHHHHHHHHHHHHHT-CC
T ss_pred CeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe------cCCCCc---CCCHHHHHHHHHHHHHcC-CC
Confidence 999999999999999999999999988764 234566666542 233433 346799999999999984 33
Q ss_pred CccccccCCccHHHHHHhCCCEE-EEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhc
Q 013641 371 GKPEILASTTDARYMRQLGIPVL-GFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 371 ~~~~~~~~~tD~~~~~~~gip~v-~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
+.+....+++|+++|.+. +|++ .|+|+... ..|+|+|+++++++..++++|+.++.++++
T Consensus 347 ~~~~~~~ggtD~~~~~~~-iP~~~~~~~~~~~--~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~ 407 (408)
T 3n5f_A 347 SFWLPSGAAHDSVQLAPI-CPIGMIFVRSQDG--VSHSPAEWSTKEDCAAGAEVLYHTVWQLAQ 407 (408)
T ss_dssp CCEEEESSCCTTTTTTTT-SCEEEEEECCGGG--CCSSTTCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCcCchHHHHHHHH-CCEEEEEeCCCCC--CCCCccccCCHHHHHHHHHHHHHHHHHHhc
Confidence 244556789999999876 9995 67776532 699999999999999999999999998864
No 27
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.8e-43 Score=351.80 Aligned_cols=346 Identities=15% Similarity=0.135 Sum_probs=273.1
Q ss_pred CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccC
Q 013641 26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPA 105 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~ 105 (439)
...+++++++++|+++||+| ++|.++++||+++|+++|++++++.. +.++||+++++|..+ +|+|+|+|||||||.
T Consensus 13 ~~~~~~~~~~~~l~~~pe~s--~~E~~~~~~i~~~l~~~G~~v~~~~~-g~~~~via~~~g~~~-g~~i~l~ah~D~vpg 88 (394)
T 3ram_A 13 TNKYSYIEISHRIHERPELG--NEEIFASRTLIDRLKEHDFEIETEIA-GHATGFIATYDSGLD-GPAIGFLAEYDALPG 88 (394)
T ss_dssp HTHHHHHHHHHHHHHSCCCT--TCCHHHHHHHHHHHHHTTCEEEEEET-TEEEEEEEEEECSSS-SCEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHHhCCCCC--cchHHHHHHHHHHHHHcCCeEEeCCC-CCceEEEEEEeCCCC-CCEEEEEEecccCCC
Confidence 45688999999999999997 79999999999999999999887642 235799999987543 589999999999982
Q ss_pred CCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHH-HHHhccc
Q 013641 106 EPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMA-KFVESNE 184 (439)
Q Consensus 106 ~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~-~~~~~~~ 184 (439)
++||||+ |++ .+++|.|++.|+ +.+.+++++|.|+|+++||.|+..|++ .+++.+.
T Consensus 89 -------------------~~ha~G~-d~~--~a~~l~aa~~L~-~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~ 145 (394)
T 3ram_A 89 -------------------LGHACGH-NII--GTASVLGAIGLK-QVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGV 145 (394)
T ss_dssp -------------------TSSTTCH-HHH--HHHHHHHHHHHH-TTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTG
T ss_pred -------------------cceECCc-cHH--HHHHHHHHHHHH-HhHhhCCceEEEEEECCccCCCCCchHHHHHHcCC
Confidence 2356775 654 467888999998 765568899999999999987326999 8998887
Q ss_pred ccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcC-CCCCC-cHHHHHHHHHHHHHccccchhHHHHhcc
Q 013641 185 FRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGS-RMFDN-GAMENLMKSVEMITKFRESQFDVVKAGR 262 (439)
Q Consensus 185 ~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~-~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~ 262 (439)
++++|++++++ |+....+..+.+|..+++|+++|+++|++ .|+.| |||..++.+++.|+.+....
T Consensus 146 ~~~~d~~~~~h-----~~~~~~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~-------- 212 (394)
T 3ram_A 146 IDQIDIALMIH-----PGNETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI-------- 212 (394)
T ss_dssp GGGCSEEECCE-----EESSBBCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS--------
T ss_pred cccCCEEEEEC-----CccccCCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC--------
Confidence 77788777664 43223566778999999999999999999 89988 99999999999998753210
Q ss_pred ccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhccc--CCCceEEEee-cccccc
Q 013641 263 AANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPA--IRNMSYEIIE-KGPIRD 339 (439)
Q Consensus 263 ~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~-~~~~~~ 339 (439)
...++++++.++||. +.|+||++|++.+++|+.+.++.+++.++|++.++.. ..+++++++. .
T Consensus 213 ---~~~~~~~~~~i~gG~------~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~~----- 278 (394)
T 3ram_A 213 ---KKDQRVHGVILDGGK------AANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQ----- 278 (394)
T ss_dssp ---CTTCEEEEEEEEBCS------CTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEESS-----
T ss_pred ---CCCCeeEEEEEECCC------CCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEec-----
Confidence 112466777788887 9999999999999999999999999999999888642 3466777664 2
Q ss_pred CCCCCccccCCCCChHHHHHHHHHHHhCCCCC-ccccccCCccHHHHHHhCCCEEEE--ccCCCCCCCCCCCCCc-----
Q 013641 340 YKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLG-KPEILASTTDARYMRQLGIPVLGF--SPMANTPILLHDHNEF----- 411 (439)
Q Consensus 340 ~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~-~~~~~~~~tD~~~~~~~gip~v~~--Gp~~~~~~~~H~~nE~----- 411 (439)
..+|+ +.+|.++++.+.+++++.+ ... .+....+++|+++|.+ .+|++.+ |.+.. ....|+| |+
T Consensus 279 -~~~~~---~~~d~~l~~~~~~a~~~~G-~~~~~~~~~~g~~D~~~~~~-~~P~~~~~~g~~~~-~~~~H~~-ef~~~~~ 350 (394)
T 3ram_A 279 -NGVNE---FIKTPKLDDLFAKYAEEVG-EAVIDDDFGYGSTDTGNVSH-VVPTIHPHIKIGSR-NLVGHTH-RFREAAA 350 (394)
T ss_dssp -CCBCC---CCCCHHHHHHHHHHHHHTT-CCBCCSCCCCBCCTHHHHTT-TSCBCCCEEECSCT-TCCTTSH-HHHHHTT
T ss_pred -CCCCC---ccCCHHHHHHHHHHHHHhC-cccccCCCCcccccHHHHHH-HhchheEEeeecCC-CCCCCCH-HHHhccC
Confidence 23333 3457889999999999865 431 2344678999999985 5888732 32221 1268999 77
Q ss_pred --cchHhHHHHHHHHHHHHHHhhc
Q 013641 412 --LKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 412 --i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
++.+++..++++|+.++.++++
T Consensus 351 ~~~~~~~l~~g~~~la~~~~~~l~ 374 (394)
T 3ram_A 351 SVHGDEALIKGAKIMALMGLELIT 374 (394)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHhc
Confidence 4899999999999999988865
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=100.00 E-value=1.9e-37 Score=292.41 Aligned_cols=258 Identities=20% Similarity=0.320 Sum_probs=206.0
Q ss_pred CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccC
Q 013641 26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPA 105 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~ 105 (439)
.+.+++++++++|++|||+| ++|.++++||+++|+++|++++.+... +.+||++++ |+ ++|+|+|+|||||||+
T Consensus 3 ~~~~~~~~~l~~lv~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~-~~~nv~a~~-g~--~~~~i~l~~H~D~vp~ 76 (268)
T 3t68_A 3 ATDSPVLALAKELISRQSVT--PADAGCQDLMIERLKALGFEIESMVFE-DTTNFWARR-GT--QSPLFVFAGHTDVVPA 76 (268)
T ss_dssp -CCCHHHHHHHHHHTSCCBT--TCCTTHHHHHHHHHHHTTCEECCCEET-TEEC-CEEE-CS--SSCEEEEEEECCBCCC
T ss_pred ccHHHHHHHHHHHhCCCCCC--CCchHHHHHHHHHHHHCCCeEEEEecC-CccEEEEEe-CC--CCCeEEEEccccccCC
Confidence 34689999999999999998 678899999999999999988765543 568999998 64 3589999999999999
Q ss_pred CC-CCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhccc
Q 013641 106 EP-DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNE 184 (439)
Q Consensus 106 ~~-~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~ 184 (439)
++ +.|+.+||++.++ ||++||||+.|||++++++|.|++.|+ +.+.+++++|.|+|+++||.|+..|++.+++...
T Consensus 77 ~~~~~w~~~pf~~~~~--~g~~~g~G~~D~k~g~a~~l~a~~~l~-~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~ 153 (268)
T 3t68_A 77 GPLSQWHTPPFEPTVI--DGFLHGRGAADMKGSLACMIVAVERFI-AEHPDHQGSIGFLITSDEEGPFINGTVRVVETLM 153 (268)
T ss_dssp CCGGGCSSCTTSCEEE--TTEEESTTTTTTHHHHHHHHHHHHHHH-HHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHH
T ss_pred CCcccCCCCCCccEEE--CCEEEecCcccchHHHHHHHHHHHHHH-HhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHH
Confidence 87 6899999999999 999999999999999999999999999 7777788999999999999987359999887531
Q ss_pred --ccccceEEEEecCCcCCCCcc----eEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHH
Q 013641 185 --FRELNVGFVMDEGQASTNDDF----RVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVV 258 (439)
Q Consensus 185 --~~~~~~~~v~~~g~~~p~~~~----~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~ 258 (439)
....|++++++ |+... .+..+.+|
T Consensus 154 ~~~~~~d~~i~~e-----pt~~~~~~~~i~~g~~G--------------------------------------------- 183 (268)
T 3t68_A 154 ARNELIDMCIVGE-----PSSTLAVGDVVKNGRRG--------------------------------------------- 183 (268)
T ss_dssp HTTCCCCEEEECS-----CCBSSSTTSEEEECCGG---------------------------------------------
T ss_pred hcCCCCCEEEEeC-----CCCCccCCceeEEecCC---------------------------------------------
Confidence 22356666663 43200 01111111
Q ss_pred HhccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccc
Q 013641 259 KAGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIR 338 (439)
Q Consensus 259 ~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 338 (439)
. .
T Consensus 184 ----------------------------~---------------------------------------------p----- 185 (268)
T 3t68_A 184 ----------------------------G---------------------------------------------G----- 185 (268)
T ss_dssp ----------------------------G---------------------------------------------G-----
T ss_pred ----------------------------C---------------------------------------------c-----
Confidence 1 1
Q ss_pred cCCCCCccccCCCCChHHHHHHHHHHHh-CCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhH
Q 013641 339 DYKGRPLMTLTDDSNPWWSVFKRAVTSA-GGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVF 417 (439)
Q Consensus 339 ~~~~~p~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l 417 (439)
+. + +++++++.+.+++++. +... ......|++|++++.+.|+|++.|||+.. ..|+++|+++++++
T Consensus 186 ------~~--~-~~~~l~~~l~~a~~~~~gi~~-~~~~sgggtD~~~~~~~g~p~~~~~~~~~---~~Hs~~E~v~~~d~ 252 (268)
T 3t68_A 186 ------FL--T-DTGELLAAVVAAVEEVNHQAP-ALLTTGGTSDGRFIAQMGAQVVELGPVNA---TIHKVNECVRIADL 252 (268)
T ss_dssp ------TS--C-CCCHHHHHHHHHHHHHHSSCC-EEESSCCCHHHHHHHHHTCEEEECCSBCT---TTTSTTCEEEHHHH
T ss_pred ------cc--C-CchHHHHHHHHHHHHHhCCCc-EEecCccccHHHHHHhcCCCEEEEeeCCC---CCCCccccccHHHH
Confidence 21 1 1357999999999985 4332 44445689999999989999999999875 57999999999999
Q ss_pred HHHHHHHHHHHHHhhc
Q 013641 418 LKGVEVYESVISSLSS 433 (439)
Q Consensus 418 ~~~~~~~~~~l~~~~~ 433 (439)
.++++++..++..+++
T Consensus 253 ~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 253 EKLTDMYQKTLNHLLG 268 (268)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998763
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=100.00 E-value=3.7e-36 Score=283.67 Aligned_cols=260 Identities=23% Similarity=0.337 Sum_probs=201.9
Q ss_pred chhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccCCC
Q 013641 28 EREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEP 107 (439)
Q Consensus 28 ~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~~ 107 (439)
.+++++++++|++|||+| ++|.++++||+++|+++|++++.+... +.+||++++ |. ++|+|+|+|||||||+++
T Consensus 5 ~~~~~~~l~~lv~ips~s--~~e~~~~~~l~~~l~~~G~~~~~~~~~-~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~ 78 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSIS--PNDEGCQQIIAERLEKLGFQIEWMPFN-DTLNLWAKH-GT--SEPVIAFAGHTDVVPTGD 78 (269)
T ss_dssp HHHHHHHHHHHHTSCCBT--TCCTTHHHHHHHHHHTTTCEEEECCBT-TBCEEEEEE-CS--SSCEEEEEEECCBCCCCC
T ss_pred HHHHHHHHHHHhCCCCCC--CCcHHHHHHHHHHHHHcCCeEEEEEcC-CceEEEEEe-CC--CCCEEEEEeeecccCCCC
Confidence 468899999999999998 678899999999999999998876543 578999998 64 358999999999999987
Q ss_pred -CCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhccc--
Q 013641 108 -DKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNE-- 184 (439)
Q Consensus 108 -~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~-- 184 (439)
+.|+.+||++.++ ||++||||+.|||++++++|.|++.|+ +.+.+++++|.|+|+++||.|+..|++.+++...
T Consensus 79 ~~~w~~~pf~~~~~--~g~~~grG~~D~k~g~a~~l~a~~~l~-~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~ 155 (269)
T 4h2k_A 79 ENQWSSPPFSAEII--DGMLYGRGAADMKGSLAAMIVAAEEYV-KANPNHKGTIALLITSDEEATAKDGTIHVVETLMAR 155 (269)
T ss_dssp GGGCSSCTTSCCEE--TTEEESTTTTTTHHHHHHHHHHHHHHH-HHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHT
T ss_pred cccccCCCCCeEEE--CCEEEeCCcccChHHHHHHHHHHHHHH-HhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhc
Confidence 6899999999999 999999999999999999999999999 7777788999999999999987449999887431
Q ss_pred ccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHHhcccc
Q 013641 185 FRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAA 264 (439)
Q Consensus 185 ~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~ 264 (439)
....|++++. +|+.. . ..|-
T Consensus 156 ~~~~d~~i~~-----Ept~~-~----~~~~-------------------------------------------------- 175 (269)
T 4h2k_A 156 DEKITYCMVG-----EPSSA-K----NLGD-------------------------------------------------- 175 (269)
T ss_dssp TCCCCEEEEC-----CCCBS-S----STTS--------------------------------------------------
T ss_pred CCCCCEEEEE-----CCCCC-C----cCCc--------------------------------------------------
Confidence 1235656655 34420 0 0000
Q ss_pred CCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCC
Q 013641 265 NSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRP 344 (439)
Q Consensus 265 ~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p 344 (439)
. +.-|.. | . + ..
T Consensus 176 -----~-----i~~g~~---G-~--------------------------------------G-----~~----------- 187 (269)
T 4h2k_A 176 -----V-----VKNGRR---G-G--------------------------------------G-----FL----------- 187 (269)
T ss_dssp -----E-----EECSCT---T-C--------------------------------------C------------------
T ss_pred -----e-----eEEecc---c-c--------------------------------------c-----cc-----------
Confidence 0 000110 0 1 0 00
Q ss_pred ccccCCCCChHHHHHHHHHHH-hCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHH
Q 013641 345 LMTLTDDSNPWWSVFKRAVTS-AGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEV 423 (439)
Q Consensus 345 ~~~~~~~~~~~~~~l~~a~~~-~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~ 423 (439)
..++++++.+.+++++ .+... .....+|+||++++...|+|++.|||... ..|+++|+++++++.+++++
T Consensus 188 -----~~~~~l~~~l~~aa~~~~gi~~-~~~~~gggtDa~~~~~~g~p~~~~~~~~~---~~Hs~~E~v~~~d~~~~~~l 258 (269)
T 4h2k_A 188 -----TKPGKLLDSITSAIEETIGITP-KAETGGGTSDGRFIALMGAEVVEFGPLNS---TIHKVNECVSVEDLGKCGEI 258 (269)
T ss_dssp ---------HHHHHHHHHHHHHHSCCC-EEECC--CHHHHHHHTTTCEEEECCSBCT---TTTSTTCEEEHHHHHHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHhCCCC-EEecCCCCchHHHHHhhCCCEEEEEeCCC---CCcCCcccccHHHHHHHHHH
Confidence 0125788999999987 44433 43445689999999988999999999874 58999999999999999999
Q ss_pred HHHHHHHhhc
Q 013641 424 YESVISSLSS 433 (439)
Q Consensus 424 ~~~~l~~~~~ 433 (439)
|..++..+.+
T Consensus 259 l~~~l~~l~~ 268 (269)
T 4h2k_A 259 YHKMLVNLLD 268 (269)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHhh
Confidence 9999988764
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=100.00 E-value=6.7e-36 Score=268.90 Aligned_cols=194 Identities=48% Similarity=0.912 Sum_probs=165.5
Q ss_pred CCCCCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeeccc
Q 013641 23 GKSHEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDS 102 (439)
Q Consensus 23 ~~~~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dt 102 (439)
....+.++++++|++|++|||+|.+++|.++++|++++|+++|++++.++...+.+|++++++|++++.|+|+|+|||||
T Consensus 4 ~~~~~~~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~Dt 83 (198)
T 1q7l_A 4 KGPEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDV 83 (198)
T ss_dssp ---CCCCHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCB
T ss_pred ccchhHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecc
Confidence 34567889999999999999998544788999999999999999988776544678999999876544589999999999
Q ss_pred ccCCCCCCCCCCCceeE-eCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHh
Q 013641 103 VPAEPDKWSHPPFSAFH-SPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVE 181 (439)
Q Consensus 103 vp~~~~~w~~~Pf~~~~-~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~ 181 (439)
||++++.|..+||.+.+ + ||++||||++|||++++++|.|++.|+ +.+.+++++|.|+|+++||.|+..|++++++
T Consensus 84 Vp~~~~~w~~~pf~~~~~~--~g~l~GrGa~D~K~g~a~~l~a~~~l~-~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~ 160 (198)
T 1q7l_A 84 VPVFKEHWSHDPFEAFKDS--EGYIYARGAQDMKCVSIQYLEAVRRLK-VEGHRFPRTIHMTFVPDEEVGGHQGMELFVQ 160 (198)
T ss_dssp CCCCGGGCSSCTTTCCBCT--TSEEECTTTTTTHHHHHHHHHHHHHHH-HTTCCCSSCEEEEEESCGGGTSTTTHHHHTT
T ss_pred cCCCcccCccCCCeeeEcc--CCEEEeCcchhchHHHHHHHHHHHHHH-HcCCCCCCCEEEEEEcccccCccccHHHHHH
Confidence 99986689999999887 6 999999999999999999999999999 8887889999999999999984489999998
Q ss_pred cccccccceEEEEecCCcCCCCcceEEeeccceEEEEE
Q 013641 182 SNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLII 219 (439)
Q Consensus 182 ~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v 219 (439)
+..+...++.+++|.|..+|++.+.++++++|..+++|
T Consensus 161 ~~~~~~~~~~~~id~g~~ept~~~~v~~~~kG~~~~~v 198 (198)
T 1q7l_A 161 RPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRV 198 (198)
T ss_dssp SHHHHTTCEEEEEECCCCCSSSSEEEEECCSSCGGGCC
T ss_pred hHHhccCCcCEEEecCccCCCCCceEEEEccEEEEEEC
Confidence 75443345668888887899866789999999887653
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.95 E-value=2.4e-28 Score=238.05 Aligned_cols=255 Identities=16% Similarity=0.142 Sum_probs=173.2
Q ss_pred HHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccCC-------
Q 013641 34 RFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAE------- 106 (439)
Q Consensus 34 ~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~------- 106 (439)
+|++|+++||+| ++|.++++||+++|+++|++++.+ ..+|+++.++|.. +.|+|+|.||||+||..
T Consensus 3 ~l~~L~~~~s~s--g~e~~~~~~l~~~l~~~g~~~~~d----~~gnlia~~~g~~-~~~~v~l~aH~D~v~~~v~~i~~~ 75 (340)
T 2fvg_A 3 YLKELSMMPGVS--GDEGKVRDFIKSKIEGLVDNLYTD----VLGNLIALKRGRD-SSKKLLVSAHMDEVGFVVSKIEKD 75 (340)
T ss_dssp CHHHHHHSCCBT--TCCHHHHHHHHHHHGGGSSEEEEC----TTSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTT
T ss_pred HHHHHHcCCCCC--CchHHHHHHHHHHHHhhCCEEEEe----CCCcEEEEecCCC-CCceEEEEeccCcCcEEEEEECCC
Confidence 589999999997 788899999999999999987764 4679999997643 24799999999999930
Q ss_pred -------CCCCCCCCCcee-----------------------------------------------EeCCC---------
Q 013641 107 -------PDKWSHPPFSAF-----------------------------------------------HSPET--------- 123 (439)
Q Consensus 107 -------~~~w~~~Pf~~~-----------------------------------------------~~~~d--------- 123 (439)
..+|..+||.+. ++ .+
T Consensus 76 G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~-~gd~v~~~~~~ 154 (340)
T 2fvg_A 76 GKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVS-IGDYVSFVSDY 154 (340)
T ss_dssp SCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCC-TTCEEEECCCC
T ss_pred CEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCC-CCCEEEEccCc
Confidence 126988888662 11 14
Q ss_pred ----CEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccccccceEEEEecCCc
Q 013641 124 ----GQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQA 199 (439)
Q Consensus 124 ----g~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~v~~~g~~ 199 (439)
+++||| ++|||++++++|.|++.|+ +++++|.|+|+++||.|+ .|++.+++. + ..++++++|.
T Consensus 155 ~~~~~~i~gr-a~D~k~g~a~~l~a~~~l~-----~~~~~i~~~~~~~EE~G~-~G~~~~~~~--~-~~~~~i~~d~--- 221 (340)
T 2fvg_A 155 IEKNGRAVGK-AFDDRAGCSVLIDVLESGV-----SPAYDTYFVFTVQEETGL-RGSAVVVEQ--L-KPTCAIVVET--- 221 (340)
T ss_dssp EEETTEEEES-CHHHHHHHHHHHHHHHTCC-----CCSEEEEEEEECCCC------CHHHHHH--H-CCSEEEEEEE---
T ss_pred eeecCEEeec-cCccHHHHHHHHHHHHHhh-----ccCCcEEEEEEcccccch-hhhHHHhhc--c-CCCEEEEEec---
Confidence 999999 9999999999999999876 367999999999999997 899988763 2 2466777753
Q ss_pred CCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCC-cHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEee
Q 013641 200 STNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDN-GAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKA 278 (439)
Q Consensus 200 ~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~g-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~g 278 (439)
+. .. ++.|++.|++.|..| |++. .. ...
T Consensus 222 --~~-~~-------------~~~G~~~h~~~~~~G~g~~i----------~~-------------------------~~~ 250 (340)
T 2fvg_A 222 --TT-AG-------------DNPELEERKWATHLGDGPAI----------TF-------------------------YHR 250 (340)
T ss_dssp --EE-EC-------------SCSTTCCSSSSCCTTSCCEE----------CS-------------------------CCS
T ss_pred --cc-CC-------------CCCCCccccCCcccCCCcEE----------EE-------------------------eCC
Confidence 21 00 457888898777655 5320 00 000
Q ss_pred cccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCCccccCCCCChHHHH
Q 013641 279 GIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSV 358 (439)
Q Consensus 279 g~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 358 (439)
+. .. +..+.+.
T Consensus 251 ~~------~~---------------------------------------------------------------~~~l~~~ 261 (340)
T 2fvg_A 251 GY------VI---------------------------------------------------------------PKEIFQT 261 (340)
T ss_dssp SS------CC---------------------------------------------------------------CHHHHHH
T ss_pred CC------CC---------------------------------------------------------------CHHHHHH
Confidence 00 00 0113333
Q ss_pred HHHHHHHhCCCCCcc-ccccCCccHHHHHH--hCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhhc
Q 013641 359 FKRAVTSAGGKLGKP-EILASTTDARYMRQ--LGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 359 l~~a~~~~~~~~~~~-~~~~~~tD~~~~~~--~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
+++++++.+... .. ....++||++++.. .|+|++.|||+.. .+|+++|+++++++..++++|..++..+++
T Consensus 262 l~~~a~~~gi~~-~~~~~~~ggtDa~~~~~~~~GiP~v~~g~~~~---~~Hs~~E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 262 IVDTAKNNDIPF-QMKRRTAGGTDAGRYARTAYGVPAGVISTPAR---YIHSPNSIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp HHHHHHHTTCCC-EECCCC-------------CCSCEEEEEEEEE---ESSTTCEEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHcCCCe-EEEecCCCCccHHHHHhhCCCCcEEEeccccc---ccCChhhcccHHHHHHHHHHHHHHHHhccc
Confidence 333333332221 11 13457899988875 6999999999864 499999999999999999999999998875
No 32
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.93 E-value=5.6e-25 Score=216.85 Aligned_cols=262 Identities=19% Similarity=0.221 Sum_probs=189.3
Q ss_pred chhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccC--
Q 013641 28 EREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPA-- 105 (439)
Q Consensus 28 ~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~-- 105 (439)
.++++++|++|+++||+| +.|.++++||+++|+++|++++.+ ..+||+++++|+. +.|+|+|.||||+|+.
T Consensus 6 ~~~~~~~l~~L~~~~s~s--g~e~~~~~~l~~~l~~~g~~~~~d----~~gnlia~~~g~~-~~~~vll~aH~D~v~~~v 78 (373)
T 1vhe_A 6 LDETLTMLKDLTDAKGIP--GNEREVRQVMKSYIEPFADEVTTD----RLGSLIAKKTGAE-NGPKIMIAGHLDEVGFMV 78 (373)
T ss_dssp CCHHHHHHHHHHHSCCCT--TCCHHHHHHHHHHHGGGCSEEEEC----TTCCEEEEEESST-TSCEEEEEEECCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCCC--CchHHHHHHHHHHHHhhCCEEEEc----CCCcEEEEecCCC-CCceEEEEecCCcCCEEE
Confidence 468999999999999997 688899999999999999987654 5679999988753 3489999999999992
Q ss_pred --------------C----------------CC-------CCCCCCC---------------------------------
Q 013641 106 --------------E----------------PD-------KWSHPPF--------------------------------- 115 (439)
Q Consensus 106 --------------~----------------~~-------~w~~~Pf--------------------------------- 115 (439)
+ .+ .|. +|+
T Consensus 79 ~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~-~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi 157 (373)
T 1vhe_A 79 TQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSK-PPHILSPEARKKSVEIKDMFIDIGASSREEALEWGV 157 (373)
T ss_dssp EEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECC-CGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTC
T ss_pred EEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCC-CcccCchhhccCCCChhHeEEEecCCCHHHHHHcCC
Confidence 1 01 143 221
Q ss_pred ------------ceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcc
Q 013641 116 ------------SAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESN 183 (439)
Q Consensus 116 ------------~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 183 (439)
....+ +++|||| ++|||++++++|.|++.|+ +.+ ++++|+|+|+++||.|+ .|++.+..
T Consensus 158 ~~Gd~v~~~~~~~~~~~--~~~i~gr-~~D~k~g~a~~l~a~~~l~-~~~--~~~~v~~~~~~~EE~G~-~G~~~~~~-- 228 (373)
T 1vhe_A 158 LPGDMIVPHFEFTVMNN--EKFLLAK-AWDNRIGCAIAIDVLRNLQ-NTD--HPNIVYGVGTVQEEVGL-RGAKTAAH-- 228 (373)
T ss_dssp CTTCEEEECCCCEECSS--TTEEEET-THHHHHHHHHHHHHHHHHH-TSC--CSSEEEEEEESCCTTTS-HHHHHHHH--
T ss_pred CCCCEEEEccccEEecC--CCeEEec-cCccHHHHHHHHHHHHHHh-hcC--CCceEEEEEECCcccCh-hhHHHHhc--
Confidence 11112 7899999 6899999999999999998 654 66899999999999997 89988854
Q ss_pred cccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHHhccc
Q 013641 184 EFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRA 263 (439)
Q Consensus 184 ~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~ 263 (439)
.+ ..|+++++|.+. .. ..+|. .|+.+
T Consensus 229 ~~-~~d~~i~~d~~~---~~------~~~g~---------------~~~~~----------------------------- 254 (373)
T 1vhe_A 229 TI-QPDIAFGVDVGI---AG------DTPGI---------------SEKEA----------------------------- 254 (373)
T ss_dssp HH-CCSEEEEEEEEE---CC------CSTTC---------------CTTTC-----------------------------
T ss_pred cc-CCCEEEEEeccc---cC------CCCCC---------------ccccc-----------------------------
Confidence 23 257777776321 00 01111 01100
Q ss_pred cCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCC
Q 013641 264 ANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGR 343 (439)
Q Consensus 264 ~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (439)
.+.-|. | | .+.+.. .
T Consensus 255 -----------~~~lg~----G------~-----------------------------------~i~~~~---------~ 269 (373)
T 1vhe_A 255 -----------QSKMGK----G------P-----------------------------------QIIVYD---------A 269 (373)
T ss_dssp -----------CCCTTS----C------C-----------------------------------EEEEEE---------T
T ss_pred -----------ccccCC----C------c-----------------------------------eEEEeC---------C
Confidence 000010 0 1 011111 0
Q ss_pred CccccCCCCChHHHHHHHHHHHhCCCCCcc-ccccCCccHHHH--HHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHH
Q 013641 344 PLMTLTDDSNPWWSVFKRAVTSAGGKLGKP-EILASTTDARYM--RQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKG 420 (439)
Q Consensus 344 p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~-~~~~~~tD~~~~--~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~ 420 (439)
. ...+.++++.+++++++.+... .. ....++||++++ ...|+|++.|||+.. .+|+++|+++++++..+
T Consensus 270 -~---~~~~~~l~~~l~~~a~~~gi~~-~~~~~~~ggtDa~~~~~~~~GiPtv~lg~~~~---~~Hs~~E~v~~~dl~~~ 341 (373)
T 1vhe_A 270 -S---MVSHKGLRDAVVATAEEAGIPY-QFDAIAGGGTDSGAIHLTANGVPALSITIATR---YIHTHAAMLHRDDYENA 341 (373)
T ss_dssp -T---EECCHHHHHHHHHHHHHHTCCC-EEEEETTCCCTHHHHTTSTTCCCEEEEEEEEB---STTSSCEEEEHHHHHHH
T ss_pred -C---CCCCHHHHHHHHHHHHHcCCCe-EEecCCCCCccHHHHHHhCCCCcEEEEccccc---cCCChhheecHHHHHHH
Confidence 1 1235789999999999886543 33 345689999999 567999999998854 59999999999999999
Q ss_pred HHHHHHHHHHhhc
Q 013641 421 VEVYESVISSLSS 433 (439)
Q Consensus 421 ~~~~~~~l~~~~~ 433 (439)
++++..++..+++
T Consensus 342 ~~ll~~~l~~l~~ 354 (373)
T 1vhe_A 342 VKLITEVIKKLDR 354 (373)
T ss_dssp HHHHHHHHHHCCH
T ss_pred HHHHHHHHHHhcH
Confidence 9999999988764
No 33
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.93 E-value=3.1e-25 Score=215.45 Aligned_cols=247 Identities=18% Similarity=0.180 Sum_probs=183.9
Q ss_pred hHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeeccccc-----
Q 013641 30 EPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP----- 104 (439)
Q Consensus 30 ~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp----- 104 (439)
+++++|++|+++||+| +.|.++++||+++|+++|+ ++.+ +.+|+++.++| + .++|+|.||+|+|+
T Consensus 3 ~~~~~l~~l~~~~s~s--g~e~~~~~~l~~~l~~~g~-~~~d----~~gnlia~~~~-~--~~~i~l~aH~D~v~~~v~~ 72 (332)
T 2wyr_A 3 SMIEKLKKFTQIPGIS--GYEERIREEIIREIKDFAD-YKVD----AIGNLIVELGE-G--EERILFMAHMDEIGLLITG 72 (332)
T ss_dssp CHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHTTTCC-CEEC----TTCCEEEEEES-S--SEEEEEEEECCBCEEEEEE
T ss_pred cHHHHHHHHHcCCCCC--CcHHHHHHHHHHHHhhcCc-EEEc----CCCeEEEEecC-C--CceEEEEeccCcccEEEEE
Confidence 4789999999999997 6888999999999999999 6542 67899999976 2 48999999999995
Q ss_pred -----------CCCCCCCC-------------------------------------------------------------
Q 013641 105 -----------AEPDKWSH------------------------------------------------------------- 112 (439)
Q Consensus 105 -----------~~~~~w~~------------------------------------------------------------- 112 (439)
.++ |..
T Consensus 73 i~~~G~l~~~~~Gg--~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~G 150 (332)
T 2wyr_A 73 ITDEGKLRFRKVGG--IDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPL 150 (332)
T ss_dssp ECTTSCEEEEEESC--CCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTT
T ss_pred ECCCCeEEEEecCC--cChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCC
Confidence 432 321
Q ss_pred ------CCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhccccc
Q 013641 113 ------PPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFR 186 (439)
Q Consensus 113 ------~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~ 186 (439)
+||.. .. ++++||| ++|||++++++|.|++.|+ +.+ ++++|.|+|+++||.|+ .|++.+.+. +
T Consensus 151 d~~~~~~~~~~-~~--~~~i~gr-a~D~k~g~a~~l~a~~~l~-~~~--~~~~i~~~~~~~EE~G~-~G~~~~~~~--~- 219 (332)
T 2wyr_A 151 DFAVFKKHFSV-LN--GKYVSTR-GLDDRFGVVALIEAIKDLV-DHE--LEGKVIFAFTVQEEVGL-KGAKFLANH--Y- 219 (332)
T ss_dssp CEEEECCCCEE-ET--TTEEECT-THHHHHHHHHHHHHHHTTT-TSC--CSSEEEEEEESCGGGTS-HHHHHHTTT--C-
T ss_pred CEEEEccccEE-ec--CCeEEcc-cCCcHHHHHHHHHHHHHHh-hcC--CCceEEEEEECccccCc-chHHHHhcc--c-
Confidence 13433 24 8999999 9999999999999999998 765 56899999999999997 899888642 3
Q ss_pred ccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHHhccccCC
Q 013641 187 ELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANS 266 (439)
Q Consensus 187 ~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 266 (439)
..++++++|.+. . . ..+| + ... .+
T Consensus 220 ~~~~~i~~d~~~--~----~---~~p~--------------------~--------------~~~-------------lg 243 (332)
T 2wyr_A 220 YPQYAFAIDSFA--C----C---SPLT--------------------G--------------DVK-------------LG 243 (332)
T ss_dssp CCSEEEEECCEE--C----C---SGGG--------------------T--------------TCC-------------TT
T ss_pred CCCEEEEEeccc--c----c---CCCC--------------------C--------------cee-------------eC
Confidence 257777775321 0 0 0111 0 000 00
Q ss_pred CceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCCcc
Q 013641 267 EVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLM 346 (439)
Q Consensus 267 ~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 346 (439)
.|. . +.+.. . +
T Consensus 244 -----------~G~------~-----------------------------------------i~~~d--------~-~-- 254 (332)
T 2wyr_A 244 -----------KGP------V-----------------------------------------IRAVD--------N-S-- 254 (332)
T ss_dssp -----------SCC------E-----------------------------------------EEEEC--------S-S--
T ss_pred -----------CCC------E-----------------------------------------EEEcC--------C-C--
Confidence 010 1 01110 0 0
Q ss_pred ccCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHH
Q 013641 347 TLTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYES 426 (439)
Q Consensus 347 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~ 426 (439)
+..+.++++.+.+++++.+... .....+++||++++.. |+|++.|||+.. ++|+++|+++++++.++++++..
T Consensus 255 --~~~~~~l~~~l~~~~~~~gi~~-~~~~~~ggtDa~~~~~-GiPtv~lg~~~~---~~Hs~~E~v~~~dl~~~~~ll~~ 327 (332)
T 2wyr_A 255 --AIYSRDLARKVWSIAEKNGIEI-QIGVTGGGTDASAFQD-RSKTLALSVPIK---YLHSEVETLHLNDLEKLVKLIEA 327 (332)
T ss_dssp --CBCCHHHHHHHHHHHHHTTCCC-EEEECSSCCGGGGGTT-TSEEEEEECEEB---SCSSTTCEEEHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHcCCCe-EEecCCCCchHHHHHc-CCCEEEEcCCcC---CCCChhhcccHHHHHHHHHHHHH
Confidence 2235789999999999875432 4445568999999988 999999998854 69999999999999999999999
Q ss_pred HHHHh
Q 013641 427 VISSL 431 (439)
Q Consensus 427 ~l~~~ 431 (439)
++..+
T Consensus 328 ~~~~l 332 (332)
T 2wyr_A 328 LAFEL 332 (332)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 98754
No 34
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.92 E-value=8.8e-28 Score=232.85 Aligned_cols=335 Identities=10% Similarity=0.045 Sum_probs=188.0
Q ss_pred HHHHHhHhcCcCCCCCCCCc-hHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccCCCCCC
Q 013641 32 ITRFKQYLRFNTAHPNPNYT-APVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKW 110 (439)
Q Consensus 32 i~~l~~lv~ips~s~~~~e~-~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~~~~w 110 (439)
+++|++|++|||+| +.|. ++++||+++|+++|++++++ +.+|||++++|. +|+|+|.|||||||.....|
T Consensus 12 ~elL~~Lv~ipS~s--g~E~~~v~~~l~~~l~~~G~~v~~D----~~GNlia~~~g~---~p~lll~~H~Dtvp~~v~~~ 82 (354)
T 2wzn_A 12 WKLMQEIIEAPGVS--GYEHLGIRDIVVDVLKEVADEVKVD----KLGNVIAHFKGS---SPRIMVAAHMDKIGVMVNHI 82 (354)
T ss_dssp HHHHHHHHHSCCBT--TCGGGTHHHHHHHHHHTTSSEEEEC----TTCCEEEEECCS---SSEEEEEEECCBCEEEEEEE
T ss_pred HHHHHHHhcCCCCC--cchHHHHHHHHHHHHHHcCCEEEEe----CCCeEEEEECCC---CceEEEEeccccCCCcCCee
Confidence 58999999999997 6664 68999999999999988765 567999999753 48999999999998753211
Q ss_pred CCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccccccce
Q 013641 111 SHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNV 190 (439)
Q Consensus 111 ~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~ 190 (439)
.+ ||.++++|..++++. ++++.++..+. ..+ .+...+.+++..+||.+. .|.+.+..+..+. +.
T Consensus 83 --------~~--~g~~~~~~~~~~~~~-~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ee~~~-~~~~~~~~~~~~~--~~ 146 (354)
T 2wzn_A 83 --------DK--DGYLHIVPIGGVLPE-TLVAQRIRFFT-EKG-ERYGVVGVLPPHLRRGQE-DKGSKIDWDQIVV--DV 146 (354)
T ss_dssp --------CT--TSCEEEEEESSCCGG-GGTTCEEEEEE-TTE-EEEEEECCCCGGGC----------CCGGGCCE--EC
T ss_pred --------ec--CCceeeccCCCccHH-HHHHHHHHHhh-ccC-CccceEEEeeeeeEeccc-ccccchhhhhhhh--hh
Confidence 23 888888887665444 33334444444 333 355677888888999876 5665554332211 11
Q ss_pred EEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHHhccccCCCceE
Q 013641 191 GFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVIS 270 (439)
Q Consensus 191 ~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t 270 (439)
..... .+.....+..+..+.....+.+.+...|++.+. ++...+..++..++.+........ .....+
T Consensus 147 g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~ 214 (354)
T 2wzn_A 147 GASSK----EEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYL--DDRICLYAMIEAARQLGDHEADIY------IVGSVQ 214 (354)
T ss_dssp SCSSH----HHHHHTTCCTTCEEEECCCCEECSSSEEECTTH--HHHHHHHHHHHHHHHCCCCSSEEE------EEEESC
T ss_pred cccch----hhhhccccccceeeeeeeeeEeecccccccccc--cccchhhhHHHHHHHHHhcccccc------ccccce
Confidence 11111 011112344455566666777778777776544 444444444444444322110000 000000
Q ss_pred eeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCCccccCC
Q 013641 271 VNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTD 350 (439)
Q Consensus 271 ~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 350 (439)
..++...++. ..|.++..+....+.+........ .+........ ..... . . .
T Consensus 215 ~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~--------~--~----~ 266 (354)
T 2wzn_A 215 EEVGLRGARV------ASYAINPEVGIAMDVTFAKQPHDK------GKIVPELGKG--PVMDV--------G--P----N 266 (354)
T ss_dssp GGGTSHHHHH------HHHHHCCSEEEEEEEEECCCTTST------TCCCCCTTSC--CEEEE--------S--T----T
T ss_pred eeeeeecccc------cccccccccceeeeeeeccccchh------hhhheeeccc--ccccc--------c--c----c
Confidence 1111111121 556666666666666655433210 0000000111 11111 0 0 0
Q ss_pred CCChHHHHHHHHHHHhCCCC-CccccccCCccHHHHH--HhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHH
Q 013641 351 DSNPWWSVFKRAVTSAGGKL-GKPEILASTTDARYMR--QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESV 427 (439)
Q Consensus 351 ~~~~~~~~l~~a~~~~~~~~-~~~~~~~~~tD~~~~~--~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~ 427 (439)
.+.................. +......++||++++. ..|+|++.|||+.. ++|+++|+++++++.+++++|..+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggTDa~~~~~~~~Giptv~~G~g~~---~~Ht~~E~v~i~dl~~~~~ll~~~ 343 (354)
T 2wzn_A 267 INPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINKEGVATAVLSIPIR---YMHSQVELADARDVDNTIKLAKAL 343 (354)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCSCCSSHHHHHHTSTTCCEEEEEEEEEB---STTSTTCEEEHHHHHHHHHHHHHH
T ss_pred cCcchhhhhHHHHHHhcCCCceEEEecccccHHHHHHHhcCCCCEEEECcccC---CCCcccEEEEHHHHHHHHHHHHHH
Confidence 11122222222222222111 1333456899999874 46999999999864 589999999999999999999999
Q ss_pred HHHhhcc
Q 013641 428 ISSLSSF 434 (439)
Q Consensus 428 l~~~~~~ 434 (439)
+.+|.+.
T Consensus 344 i~~L~~~ 350 (354)
T 2wzn_A 344 LEELKPM 350 (354)
T ss_dssp HHHCCCC
T ss_pred HHhCccc
Confidence 9998764
No 35
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.91 E-value=3.1e-24 Score=209.75 Aligned_cols=253 Identities=17% Similarity=0.115 Sum_probs=172.3
Q ss_pred CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccc--
Q 013641 26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSV-- 103 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtv-- 103 (439)
.+.++++++|++|++|||+| +.|.++++|++++|+++|++++.+ ..+||+++++|.+ +.|+|+|+||+|||
T Consensus 3 ~~~~~~~~~l~~lv~i~s~s--~~e~~~~~~l~~~l~~~g~~~~~d----~~gnl~a~~~g~~-~~~~ill~~H~Dtv~~ 75 (349)
T 2gre_A 3 HHTKETMELIKELVSIPSPS--GNTAKIINFIENYVSEWNVETKRN----NKGALILTVKGKN-DAQHRLLTAHVDTLGA 75 (349)
T ss_dssp CHHHHHHHHHHHHHTSCCBT--TCCHHHHHHHHHHTTTSSSEEEEC----SSSCEEEEECCSE-EEEEEEEEEECCBCEE
T ss_pred ccHHHHHHHHHHHHhCCCCC--ccHHHHHHHHHHHHHHhCCEEEEe----cCCcEEEEecCCC-CCceEEEEecccccce
Confidence 35678999999999999997 678899999999999999987765 4678999997643 24789999999999
Q ss_pred --------------cCCCCCCCCCCCcee---------------E-----------------------------------
Q 013641 104 --------------PAEPDKWSHPPFSAF---------------H----------------------------------- 119 (439)
Q Consensus 104 --------------p~~~~~w~~~Pf~~~---------------~----------------------------------- 119 (439)
|.+ +|...||.+. +
T Consensus 76 ~v~~i~~~G~l~~~~~G--g~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~ 153 (349)
T 2gre_A 76 MVKEIKPDGRLSLSMIG--GFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSAD 153 (349)
T ss_dssp EEEEECTTSCEEEEEES--SCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHH
T ss_pred eEEEECCCCeEEEEecC--CCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHH
Confidence 433 4655554210 0
Q ss_pred --------------------eCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHH
Q 013641 120 --------------------SPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKF 179 (439)
Q Consensus 120 --------------------~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~ 179 (439)
...+++|||| +.|||++++++|.|++.|+ +.+.+++++|+|+|+++||.|+ .|++.+
T Consensus 154 ~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr-~~D~k~g~a~~l~a~~~l~-~~~~~~~~~i~~~~~~~EE~G~-~g~~~~ 230 (349)
T 2gre_A 154 EVRELGIEVGDFVSFDPRVQITESGYIKSR-HLDDKVSVAILLKLIKRLQ-DENVTLPYTTHFLISNNEEIGY-GGNSNI 230 (349)
T ss_dssp HHHHTTCCTTCEEEECCCCEECTTSEEEES-CCTTHHHHHHHHHHHHHHH-HHTCCCSEEEEEEEESCC-----CCCCCC
T ss_pred HHHHcCCCCCCEEEEccccEEccCCeEEEe-eccchHHHHHHHHHHHHHH-hccCCCCceEEEEEECcccCCc-hhhccc
Confidence 0026899999 6899999999999999999 8777788999999999999997 887755
Q ss_pred HhcccccccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHH
Q 013641 180 VESNEFRELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVK 259 (439)
Q Consensus 180 ~~~~~~~~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~ 259 (439)
.. ..++++++|.+.. .. |-..++.
T Consensus 231 ----~~-~~~~~i~~D~~~~--~~-----------------------~p~~~~~-------------------------- 254 (349)
T 2gre_A 231 ----PE-ETVEYLAVDMGAL--GD-----------------------GQASDEY-------------------------- 254 (349)
T ss_dssp ----CT-TEEEEEEECCCCC--SC-----------------------C--CCTT--------------------------
T ss_pred ----cc-CCCEEEEEecccc--cC-----------------------CCCCCCC--------------------------
Confidence 12 2566677754311 00 0000000
Q ss_pred hccccCCCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeecccccc
Q 013641 260 AGRAANSEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRD 339 (439)
Q Consensus 260 ~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 339 (439)
|. . +.+..
T Consensus 255 -------------------g~------~-----------------------------------------i~~~~------ 262 (349)
T 2gre_A 255 -------------------TV------S-----------------------------------------ICAKD------ 262 (349)
T ss_dssp -------------------SE------E-----------------------------------------EEEEE------
T ss_pred -------------------ce------E-----------------------------------------EEEcc------
Confidence 00 0 00010
Q ss_pred CCCCCccccCCCCChHHHHHHHHHHHhCCCCCcc-ccccCCccHHHHH--HhCCCEEEEccCCCCCCCCCCCCCccchHh
Q 013641 340 YKGRPLMTLTDDSNPWWSVFKRAVTSAGGKLGKP-EILASTTDARYMR--QLGIPVLGFSPMANTPILLHDHNEFLKDTV 416 (439)
Q Consensus 340 ~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~~~~-~~~~~~tD~~~~~--~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~ 416 (439)
..+. .+..+.+.+++++++.+... .. ....++||++.+. ..|+|++.+|+... ..|+ .|+++.++
T Consensus 263 --~~~~-----~~~~l~~~l~~~a~~~gi~~-q~~~~~ggGsDa~~~~~~~~GiPt~~lg~~~~---~~Hs-~E~~~~~d 330 (349)
T 2gre_A 263 --SSGP-----YHYALRKHLVELAKTNHIEY-KVDIYPYYGSDASAAIRAGFDVKHALIGAGID---SSHA-FERTHESS 330 (349)
T ss_dssp --TTEE-----CCHHHHHHHHHHHHHHTCCE-EEEECSCC--------CCSSSCEEEEEEECCB---STTS-SEEEEHHH
T ss_pred --CCCC-----CCHHHHHHHHHHHHHcCCCc-EEeccCCCCccHHHHHHhCCCCcEEEeccCcc---cccc-ceeccHHH
Confidence 0001 13567888888888775433 22 2355789998774 46999998887654 5999 99999999
Q ss_pred HHHHHHHHHHHHHH
Q 013641 417 FLKGVEVYESVISS 430 (439)
Q Consensus 417 l~~~~~~~~~~l~~ 430 (439)
+..+++++..++..
T Consensus 331 l~~~~~ll~~~l~~ 344 (349)
T 2gre_A 331 IAHTEALVYAYVMS 344 (349)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988864
No 36
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.90 E-value=2.7e-23 Score=203.44 Aligned_cols=255 Identities=15% Similarity=0.116 Sum_probs=182.1
Q ss_pred HHHHHHhHhcCcCCCCCCCC-chHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeeccccc-----
Q 013641 31 PITRFKQYLRFNTAHPNPNY-TAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVP----- 104 (439)
Q Consensus 31 ~i~~l~~lv~ips~s~~~~e-~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp----- 104 (439)
++++|++|+++||+| ++| .+++++|+++|+++|++++.+ ..+|+++.++|. .|+|+|.||+|+|+
T Consensus 8 ~~~~l~~L~~~~s~s--g~e~~~~~~~l~~~l~~~g~~~~~d----~~gnlia~~~g~---~~~i~l~aH~D~v~~~v~~ 78 (353)
T 1y0y_A 8 DYELLKKVVEAPGVS--GYEFLGIRDVVIEEIKDYVDEVKVD----KLGNVIAHKKGE---GPKVMIAAHMDQIGLMVTH 78 (353)
T ss_dssp CHHHHHHHHHSCCBT--TCGGGTHHHHHHHHHGGGSSEEEEC----TTCCEEEEECCS---SCEEEEEEECCBCEEEEEE
T ss_pred HHHHHHHHHhCCCCC--ccchHHHHHHHHHHHHhhCCeEEEc----CCCCEEEEecCC---CccEEEEeccCcccEEEEE
Confidence 689999999999997 678 899999999999999987754 578999998764 38999999999995
Q ss_pred -----------CCCCCCCCCCCce---------------------------e---------------------------E
Q 013641 105 -----------AEPDKWSHPPFSA---------------------------F---------------------------H 119 (439)
Q Consensus 105 -----------~~~~~w~~~Pf~~---------------------------~---------------------------~ 119 (439)
.+ +|...++.. . +
T Consensus 79 i~~~G~l~~~~~G--g~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi 156 (353)
T 1y0y_A 79 IEKNGFLRVAPIG--GVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGV 156 (353)
T ss_dssp ECTTSCEEEEEES--SCCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTC
T ss_pred ECCCceEEEEEeC--CcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCC
Confidence 33 232111000 0 0
Q ss_pred eC-------------CCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhccccc
Q 013641 120 SP-------------ETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFR 186 (439)
Q Consensus 120 ~~-------------~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~ 186 (439)
.+ .++++||| +.|||++++++|.+++.|+ + ++++|.|+|+++||.|+ .|++.+.. .+
T Consensus 157 ~~Gd~v~~~~~~~~~~~~~i~gr-a~D~k~g~a~~l~a~~~l~-~----~~~~i~~~~~~~EE~g~-~G~~~~~~--~~- 226 (353)
T 1y0y_A 157 KIGTVITWDGRLERLGKHRFVSI-AFDDRIAVYTILEVAKQLK-D----AKADVYFVATVQEEVGL-RGARTSAF--GI- 226 (353)
T ss_dssp CTTCEEEECCCCEEETTTEEEET-THHHHHHHHHHHHHHHHCC-S----CSSEEEEEEESCCTTTS-HHHHHHHH--HH-
T ss_pred CCCCEEEeccCcEEecCCeEEec-cCccHHHHHHHHHHHHHhh-c----CCCeEEEEEECCcccch-hHHHHHhh--cc-
Confidence 00 15789999 8999999999999999988 4 67899999999999997 89988864 22
Q ss_pred ccceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCC-CCCcHHHHHHHHHHHHHccccchhHHHHhccccC
Q 013641 187 ELNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRM-FDNGAMENLMKSVEMITKFRESQFDVVKAGRAAN 265 (439)
Q Consensus 187 ~~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p-~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 265 (439)
..++++++|.+.. . .|-+.. ..+
T Consensus 227 ~~~~~i~~d~~~~--~-----------------------~~p~~~~~~g------------------------------- 250 (353)
T 1y0y_A 227 EPDYGFAIDVTIA--A-----------------------DIPGTPEHKQ------------------------------- 250 (353)
T ss_dssp CCSEEEEEEEEEC--C-----------------------CSTTCCGGGC-------------------------------
T ss_pred CCCEEEEEecccc--c-----------------------CCCCCccccC-------------------------------
Confidence 2567777753210 0 010000 000
Q ss_pred CCceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCCc
Q 013641 266 SEVISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPL 345 (439)
Q Consensus 266 ~~~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 345 (439)
.+ .+.+|. . +.+.. . .
T Consensus 251 ----~~---~lg~G~------~-----------------------------------------i~~~d--------~--~ 266 (353)
T 1y0y_A 251 ----VT---HLGKGT------A-----------------------------------------IKIMD--------R--S 266 (353)
T ss_dssp ----CC---CTTSCE------E-----------------------------------------EEEEE--------T--T
T ss_pred ----cc---ccCCCc------E-----------------------------------------EEEeC--------C--C
Confidence 00 000110 0 11111 0 0
Q ss_pred cccCCCCChHHHHHHHHHHHhCCCCCcc-ccccCCccHHHH--HHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHH
Q 013641 346 MTLTDDSNPWWSVFKRAVTSAGGKLGKP-EILASTTDARYM--RQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVE 422 (439)
Q Consensus 346 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~-~~~~~~tD~~~~--~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~ 422 (439)
...+.++++.+++++++.+... .. ....++||++++ ...|+|++.|||+.. .+|+++|+++++++..+++
T Consensus 267 ---~~~~~~l~~~l~~~a~~~gi~~-~~~~~~~ggsDa~~~~~~~~GiPtv~lg~~~~---~~Hs~~E~v~~~dl~~~~~ 339 (353)
T 1y0y_A 267 ---VICHPTIVRWLEELAKKHEIPY-QLEILLGGGTDAGAIHLTKAGVPTGALSVPAR---YIHSNTEVVDERDVDATVE 339 (353)
T ss_dssp ---EECCHHHHHHHHHHHHHTTCCE-EEEECSSCCCTHHHHTTSTTCCCEEEEEEEEB---SCSSSCEEEEHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHcCCCE-EEeecCCCCchHHHHHHhCCCCcEEEEccccc---ccCCHHHhcCHHHHHHHHH
Confidence 1235789999999999875432 33 235689999999 567999999998854 6999999999999999999
Q ss_pred HHHHHHHHhhc
Q 013641 423 VYESVISSLSS 433 (439)
Q Consensus 423 ~~~~~l~~~~~ 433 (439)
++..++..+..
T Consensus 340 ll~~~l~~l~~ 350 (353)
T 1y0y_A 340 LMTKALENIHE 350 (353)
T ss_dssp HHHHHHHHGGG
T ss_pred HHHHHHHhhhh
Confidence 99999998864
No 37
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.88 E-value=1.7e-21 Score=190.21 Aligned_cols=254 Identities=14% Similarity=0.107 Sum_probs=174.0
Q ss_pred hhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccC---
Q 013641 29 REPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPA--- 105 (439)
Q Consensus 29 ~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~--- 105 (439)
.+++++|++|+++||+| ++|.++++|++++|+++|++++.+ ..+||++.++|.+ .|+|+|.||+|||+.
T Consensus 5 ~~~~~~l~~Lv~~~s~s--g~e~~~~~~l~~~l~~~g~~~~~d----~~gnlia~~~g~~--~~~i~l~aH~DtV~~~v~ 76 (346)
T 1vho_A 5 METGKLLMELSNLDGPS--GYETNVVSYIKSVIEPFVDEAKTT----RHGSLIGYKKGKG--IGKLAFFAHVDEIGFVVS 76 (346)
T ss_dssp CCHHHHHHHHHHSCCBT--TCCHHHHHHHHHHHGGGCSEEEEC----TTSCEEEEECCSS--SCEEEEEEECCBCCEEEE
T ss_pred HHHHHHHHHHHcCCCCC--cchHHHHHHHHHHHHhhCCEEEEe----cCCcEEEEEcCCC--CceEEEEecCcccceEeE
Confidence 46789999999999997 788899999999999999987653 5679999997753 489999999999952
Q ss_pred ----------CCCCCCCCCC--------------cee-------------------------------------------
Q 013641 106 ----------EPDKWSHPPF--------------SAF------------------------------------------- 118 (439)
Q Consensus 106 ----------~~~~w~~~Pf--------------~~~------------------------------------------- 118 (439)
.-.+|...++ .+.
T Consensus 77 ~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~ 156 (346)
T 1vho_A 77 KVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVID 156 (346)
T ss_dssp EEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEEC
T ss_pred EecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEc
Confidence 0013532211 111
Q ss_pred ----EeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccccccceEEEE
Q 013641 119 ----HSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVM 194 (439)
Q Consensus 119 ----~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~v~ 194 (439)
+. ++.++||+ .|||.++++++.+++.|+ +.+ +++++.++|+.+||.|. .|++.... .+. .++++++
T Consensus 157 ~~~~~~--g~~i~g~~-~D~r~g~aa~l~al~~l~-~~~--~~~~~~~~~t~~EEvG~-~Ga~~~~~--~i~-~~~~i~~ 226 (346)
T 1vho_A 157 QTAFET--NGKVVGKA-LDNRASCGVLVKVLEFLK-RYD--HPWDVYVVFSVQEETGC-LGALTGAY--EIN-PDAAIVM 226 (346)
T ss_dssp CCCEEE--TTEEEETT-HHHHHHHHHHHHHHHHHT-TCC--CSSEEEEEEECTTSSSH-HHHHHTTC--CCC-CSEEEEE
T ss_pred cchhhh--cCeEEecc-CccHHHHHHHHHHHHHhh-hcC--CCceEEEEEECCcccch-hhHHHHhc--ccC-CCEEEEe
Confidence 11 37899995 599999999999999998 654 56899999999999997 77765332 222 3555555
Q ss_pred ecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCC-CCCCcHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeE
Q 013641 195 DEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSR-MFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNL 273 (439)
Q Consensus 195 ~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~-p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~ 273 (439)
|.. |++. |.. + .
T Consensus 227 D~~-----------------------------~~~~~~~~-~------------------------------------~- 239 (346)
T 1vho_A 227 DVT-----------------------------FASEPPFS-D------------------------------------H- 239 (346)
T ss_dssp EEE-----------------------------CCCCTTSC-C------------------------------------C-
T ss_pred ecc-----------------------------cccCCCCC-c------------------------------------c-
Confidence 421 1110 000 0 0
Q ss_pred eEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCCccccCCCCC
Q 013641 274 VYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSN 353 (439)
Q Consensus 274 ~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 353 (439)
. .. ..+..+++ . ...+.
T Consensus 240 --~----------~~-----------------------------------~~g~~i~~-~---------------~~~~~ 256 (346)
T 1vho_A 240 --I----------EL-----------------------------------GKGPVIGL-G---------------PVVDR 256 (346)
T ss_dssp --C----------CT-----------------------------------TSCCEEEC-S---------------TTSCH
T ss_pred --c----------cc-----------------------------------CCCceEEe-C---------------CcCCH
Confidence 0 00 00111111 0 12356
Q ss_pred hHHHHHHHHHHHhCCCCCccccc-c-CCccHHHHH--HhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHH
Q 013641 354 PWWSVFKRAVTSAGGKLGKPEIL-A-STTDARYMR--QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVIS 429 (439)
Q Consensus 354 ~~~~~l~~a~~~~~~~~~~~~~~-~-~~tD~~~~~--~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~ 429 (439)
++++.+++++++.+... ..... . ++||++++. ..|+|++.+|++.. ..|+++|+++++++..+++++..++.
T Consensus 257 ~l~~~~~~~a~~~gi~~-~~~~~~g~ggsDa~~~~~~~~gipt~~lg~~~~---~~Hs~~E~~~~~dl~~~~~ll~~~~~ 332 (346)
T 1vho_A 257 NLVQKIIEIAKKHNVSL-QEEAVGGRSGTETDFVQLVRNGVRTSLISIPLK---YMHTPVEMVDPRDVEELARLLSLVAV 332 (346)
T ss_dssp HHHHHHHHHHHHTTCCC-EEESSCCC----CTTHHHHHTTCEEEEEEEECB---STTSTTEEECHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCE-EEEeCCCCCCchHHHHHHhCCCCcEEEEehhhc---ccccHHHhcCHHHHHHHHHHHHHHHH
Confidence 89999999999876543 33334 4 889998884 46999999998875 59999999999999999999999999
Q ss_pred Hhhcc
Q 013641 430 SLSSF 434 (439)
Q Consensus 430 ~~~~~ 434 (439)
.++..
T Consensus 333 ~~~~~ 337 (346)
T 1vho_A 333 ELEVE 337 (346)
T ss_dssp HCC--
T ss_pred Hhhhh
Confidence 88754
No 38
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.87 E-value=6.8e-22 Score=190.61 Aligned_cols=250 Identities=13% Similarity=0.093 Sum_probs=173.3
Q ss_pred CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEE--e-cCCccEEEEEEcCCCCCCCcEEEeeeccc
Q 013641 26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLE--F-VPNKPILLLTWPGSDPSLPSILFNSHLDS 102 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~--~-~~~~~nvi~~~~g~~~~~~~vll~aH~Dt 102 (439)
.-.++++++|++|+++||+| ++|.++++||+++|+++|++++.+. . .++.+|+++.++| + |+|+|.|||||
T Consensus 14 ~~~~~~~~~l~~Lv~i~s~s--g~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g---~-~~ill~aH~Dt 87 (321)
T 3cpx_A 14 NLYFQGMQLLKELCSIHAPS--GNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG---N-PRTAVFAHMDS 87 (321)
T ss_dssp GGGCCHHHHHHHHHHSCCBT--TCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES---S-CSEEEEEECCB
T ss_pred hHHHHHHHHHHHHHcCCCCC--CCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC---C-ceEEEEecCCc
Confidence 34577899999999999997 7889999999999999999876543 1 1126799999876 3 78999999999
Q ss_pred cc-----------CCC-CCCCCCC---------Cce-----------------------------eEeCCCCEEEecCcc
Q 013641 103 VP-----------AEP-DKWSHPP---------FSA-----------------------------FHSPETGQIFARGSQ 132 (439)
Q Consensus 103 vp-----------~~~-~~w~~~P---------f~~-----------------------------~~~~~dg~i~GrG~~ 132 (439)
|+ .+. ..|...+ +.+ +.. +|+++|| +.
T Consensus 88 V~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~--~g~i~~~-~~ 164 (321)
T 3cpx_A 88 IGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREE--GDFILTP-YL 164 (321)
T ss_dssp CEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEE--TTEEECT-TH
T ss_pred CCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEE--cCEEEEc-CC
Confidence 94 322 1121111 111 112 3788889 46
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHh--cccccccceEEEEecCCcCCCCcceEEee
Q 013641 133 DDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVE--SNEFRELNVGFVMDEGQASTNDDFRVFYA 210 (439)
Q Consensus 133 D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~--~~~~~~~~~~~v~~~g~~~p~~~~~i~~~ 210 (439)
|||+|++++|.+++.++ + ++++|+.+||.|+ .|++.... ...+ ..++++++|.+. . ..
T Consensus 165 D~k~G~aa~l~al~~l~------~---i~~~~t~~EEvG~-~Ga~~a~~~~~~~~-~~~~~i~~D~~~--~-~~------ 224 (321)
T 3cpx_A 165 DDRLGVWTALELAKTLE------H---GIIAFTCWEEHGG-GSVAYLARWIYETF-HVKQSLICDITW--V-TE------ 224 (321)
T ss_dssp HHHHHHHHHHHHTTTCC------S---EEEEEESSTTTTC-CSHHHHHHHHHHHH-CCCEEEECCCEE--C-CS------
T ss_pred cCHHHHHHHHHHHHHhc------C---cEEEEECCccCch-hcchhhhhcccccc-CCCEEEEEeCcc--c-cC------
Confidence 99999999999987643 2 8999999999997 78875321 1122 246677765321 0 00
Q ss_pred ccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEeecccCCCCccccc
Q 013641 211 DRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKAGIPSPTGFVMNM 290 (439)
Q Consensus 211 ~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gg~~~~~g~~~n~ 290 (439)
.. .+..|
T Consensus 225 --------------------------------------~~------------------------~~~~G----------- 231 (321)
T 3cpx_A 225 --------------------------------------GV------------------------EAGKG----------- 231 (321)
T ss_dssp --------------------------------------SS------------------------CTTSC-----------
T ss_pred --------------------------------------Cc------------------------ccCCC-----------
Confidence 00 00001
Q ss_pred ccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCCC
Q 013641 291 QPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGKL 370 (439)
Q Consensus 291 iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~~ 370 (439)
..+++. . + ...+.++++.+++++++.+...
T Consensus 232 ------------------------------------~~i~~~--------~-~-----~~~~~~l~~~~~~~a~~~gi~~ 261 (321)
T 3cpx_A 232 ------------------------------------VAISMR--------D-R-----MIPRKKYVNRIIELARQTDIPF 261 (321)
T ss_dssp ------------------------------------EEEEEE--------S-S-----SCCCHHHHHHHHHHHTTSSCCE
T ss_pred ------------------------------------cEEEEC--------C-C-----CCCCHHHHHHHHHHHHHcCCCE
Confidence 011111 1 1 1235678888888888776543
Q ss_pred Cccc-cccCCccHHHH--HHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHh
Q 013641 371 GKPE-ILASTTDARYM--RQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSL 431 (439)
Q Consensus 371 ~~~~-~~~~~tD~~~~--~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~ 431 (439)
... ...|+||++++ ...|+|++.+||+.. ..|+++|++.++++...++++..++..+
T Consensus 262 -q~~~~~~GGsD~~~~~~s~~Gipt~~lG~~~~---~~Hs~~E~~~~~dl~~~~~ll~~~~~~l 321 (321)
T 3cpx_A 262 -QLEVEGAGASDGRELQLSPYPWDWCFIGAPEK---DAHTPNECVHKKDIESMVGLYKYLMEKL 321 (321)
T ss_dssp -EEEECSSCCCHHHHHHHSSSCCBCCBEECEEB---STTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred -EEEeCCCCCccHHHHHHhCCCCCEEEEchhhc---ccchhhhheeHHHHHHHHHHHHHHHHhC
Confidence 332 25689999988 457999999999865 6999999999999999999999998754
No 39
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.86 E-value=2.1e-20 Score=182.64 Aligned_cols=254 Identities=15% Similarity=0.163 Sum_probs=178.8
Q ss_pred HHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccC-------
Q 013641 33 TRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPA------- 105 (439)
Q Consensus 33 ~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~------- 105 (439)
++|++|+++||+| ++|.++++||+++|+++|+.++.+ ..+|+++.++|. +.|+|+|.||+|||+.
T Consensus 7 ~~l~~Lv~~~s~s--g~e~~~~~~l~~~l~~~g~~v~~d----~~gnlia~~~g~--~~~~vll~aH~DtV~~~v~~i~~ 78 (348)
T 1ylo_A 7 SLLKALSEADAIA--SSEQEVRQILLEEAARLQKEVRFD----GLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISR 78 (348)
T ss_dssp HHHHHHHHSCCBT--TBCHHHHHHHHHHHHHTTCCEEEC----TTCCEEEECCCC--SSCEEEEEEECCCCEEEEEEECT
T ss_pred HHHHHHHcCCCCC--CchHHHHHHHHHHHHhhCCEEEEe----cCCCEEEEecCC--CCceEEEEEcCCccceEEEEECC
Confidence 7899999999997 788899999999999999987743 567999998775 3489999999999961
Q ss_pred -C-----C-CCCC-----C-------------------------------------------------------CCCcee
Q 013641 106 -E-----P-DKWS-----H-------------------------------------------------------PPFSAF 118 (439)
Q Consensus 106 -~-----~-~~w~-----~-------------------------------------------------------~Pf~~~ 118 (439)
+ + .+|. . ++|..
T Consensus 79 ~G~~~~~~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~- 157 (348)
T 1ylo_A 79 EGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQV- 157 (348)
T ss_dssp TCCEEEEEESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEE-
T ss_pred CCeEEEEecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEE-
Confidence 0 0 0121 0 11111
Q ss_pred EeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccccccceEEEEecCC
Q 013641 119 HSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRELNVGFVMDEGQ 198 (439)
Q Consensus 119 ~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~~~~~~v~~~g~ 198 (439)
.. +|++||| ..|||.++++++.+++.++ +.+ ++.++.++|+.+||.|+ .|++.... .+. .++++++|...
T Consensus 158 ~~--~~~~~~~-~~D~k~g~aa~l~al~~l~-~~~--~~~~~~~~~t~~EEvG~-~Ga~~~~~--~i~-~~~~i~~D~~~ 227 (348)
T 1ylo_A 158 LP--HQRVMGK-AFDDRLSCYLLVTLLRELH-DAE--LPAEVWLVASSSEEVGL-RGGQTATR--AVS-PDVAIVLDTAC 227 (348)
T ss_dssp ET--TTEEEET-THHHHHHHHHHHHHHHHHT-TCC--CSSEEEEEEESCCTTSS-HHHHHHHH--HHC-CSEEEEECCCC
T ss_pred ec--CCEEEec-CcccHHHHHHHHHHHHHhh-hcC--CCceEEEEEEcccccch-hHHHHhhc--ccC-CCEEEEEeccc
Confidence 13 7999999 5699999999999999988 543 66899999999999997 78765543 222 35667665321
Q ss_pred cCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHHhccccCCCceEeeEeEEee
Q 013641 199 ASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSEVISVNLVYLKA 278 (439)
Q Consensus 199 ~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~g 278 (439)
. + ..|.. +. ... ..-
T Consensus 228 ~-----------------------~-----~~~~~-~~-----------~~~-------------------------~~~ 242 (348)
T 1ylo_A 228 W-----------------------A-----KNFDY-GA-----------ANH-------------------------RQI 242 (348)
T ss_dssp C-----------------------S-----STTCC-ST-----------TCC-------------------------CCT
T ss_pred c-----------------------C-----CCCCC-Cc-----------ccc-------------------------ccC
Confidence 0 0 00100 10 000 000
Q ss_pred cccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCCccccCCCCChHHHH
Q 013641 279 GIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSV 358 (439)
Q Consensus 279 g~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 358 (439)
+ .++.+.+.. .+ ...+..+++.
T Consensus 243 ~---------------------------------------------~G~~i~~~~--------~~-----~~~~~~l~~~ 264 (348)
T 1ylo_A 243 G---------------------------------------------NGPMLVLSD--------KS-----LIAPPKLTAW 264 (348)
T ss_dssp T---------------------------------------------SCCEEEEEC--------SS-----CBCCHHHHHH
T ss_pred C---------------------------------------------CCcEEEEeC--------CC-----CCCCHHHHHH
Confidence 0 011122221 11 1135689999
Q ss_pred HHHHHHHhCCCCCcc-ccccCCccHHHHH--HhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhh
Q 013641 359 FKRAVTSAGGKLGKP-EILASTTDARYMR--QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLS 432 (439)
Q Consensus 359 l~~a~~~~~~~~~~~-~~~~~~tD~~~~~--~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~ 432 (439)
+++++++.+... .. ....++||++++. ..|+|++.+||+.. .+|+++|+++++++..+++++..++..+.
T Consensus 265 ~~~~a~~~gi~~-~~~~~~~ggsDa~~~~~~~~gipt~~lg~~~~---~~Hs~~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 265 IETVAAEIGVPL-QADMFSNGGTDGGAVHLTGTGVPTLVMGPATR---HGHCAASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp HHHHHHHHTCCC-EEEECSSCCCHHHHHHTSTTCCCEEEEECCCB---SCSSSCEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCCe-EEeecCCCcchHHHHHHhcCCCCEEEECcccC---cCCCcceEeeHHHHHHHHHHHHHHHHHhh
Confidence 999999887543 33 3356899999885 45999999999875 59999999999999999999999998775
No 40
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.81 E-value=6.7e-20 Score=173.69 Aligned_cols=148 Identities=20% Similarity=0.303 Sum_probs=122.2
Q ss_pred CCCCchhHHHHHHhHhcCcCCCCC------CCCchHHHHHHHHHHhcCCceEEEEecC---CccEEEEEEcCCCCCCCcE
Q 013641 24 KSHEEREPITRFKQYLRFNTAHPN------PNYTAPVSFLISQAQSIGLQFKTLEFVP---NKPILLLTWPGSDPSLPSI 94 (439)
Q Consensus 24 ~~~~~~~~i~~l~~lv~ips~s~~------~~e~~~~~~l~~~l~~~G~~~~~~~~~~---~~~nvi~~~~g~~~~~~~v 94 (439)
+..+.++++++|++|++|||+++. .+|.++++||+++|+++|++++.+.... ..+||+++++|.++ .++|
T Consensus 2 ~~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~-~~~i 80 (284)
T 1tkj_A 2 PDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDP-NKVL 80 (284)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEE-EEEE
T ss_pred CcCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCC-CCEE
Confidence 345788999999999999999731 1578999999999999999988775421 24699999987533 4789
Q ss_pred EEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCccc
Q 013641 95 LFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFD 174 (439)
Q Consensus 95 ll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~ 174 (439)
+|.||+|+||.+ ||+.|||+|++++|++++.|+ +.+.+++++|+|+|+++||.|. .
T Consensus 81 ~l~aH~D~v~~g----------------------~Ga~D~~~g~a~~l~~~~~l~-~~~~~~~~~i~~~~~~~EE~g~-~ 136 (284)
T 1tkj_A 81 MAGAHLDSVSSG----------------------AGINDNGSGSAAVLETALAVS-RAGYQPDKHLRFAWWGAEELGL-I 136 (284)
T ss_dssp EEEEECCCCTTS----------------------CCTTTTHHHHHHHHHHHHHHH-HTTCCCSEEEEEEEESCGGGTS-H
T ss_pred EEEeecCCCCCC----------------------CCCccChHHHHHHHHHHHHHH-hcCCCCCceEEEEEECCcccCC-c
Confidence 999999999763 489999999999999999999 8887889999999999999997 8
Q ss_pred CHHHHHhccc---ccccceEEEEec
Q 013641 175 GMAKFVESNE---FRELNVGFVMDE 196 (439)
Q Consensus 175 G~~~~~~~~~---~~~~~~~~v~~~ 196 (439)
|+++++++.. ..++++++++|.
T Consensus 137 Gs~~~~~~~~~~~~~~~~~~i~~D~ 161 (284)
T 1tkj_A 137 GSKFYVNNLPSADRSKLAGYLNFDM 161 (284)
T ss_dssp HHHHHHHHSCHHHHTTEEEEEEECC
T ss_pred CHHHHHhhCccchhhcEEEEEEecC
Confidence 9999987632 234566677764
No 41
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.81 E-value=4.1e-20 Score=176.50 Aligned_cols=154 Identities=20% Similarity=0.256 Sum_probs=121.2
Q ss_pred CCchhHHHHHHhHhcCcCCC-CCCCCchHHHHHHHHHHhcC--Cc-eEEEEec---CCccEEEEEEcCCCCCCCcEEEee
Q 013641 26 HEEREPITRFKQYLRFNTAH-PNPNYTAPVSFLISQAQSIG--LQ-FKTLEFV---PNKPILLLTWPGSDPSLPSILFNS 98 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s-~~~~e~~~~~~l~~~l~~~G--~~-~~~~~~~---~~~~nvi~~~~g~~~~~~~vll~a 98 (439)
.+.++++++|++|++|++.. .++.+.++++||+++|+++| ++ ++.+... .+.+||+++++|+++..++|+|.|
T Consensus 17 ~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~a 96 (299)
T 1rtq_A 17 VDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGG 96 (299)
T ss_dssp CCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEe
Confidence 46789999999999999752 23567899999999999987 33 3333221 124899999988642247899999
Q ss_pred ecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHH
Q 013641 99 HLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAK 178 (439)
Q Consensus 99 H~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~ 178 (439)
|+|+||. .|. ++.+||||+.|||+|++++|++++.|+ +.+.+++++|.|+|+++||.|. .|+++
T Consensus 97 H~D~v~~---~~~-----------~~~~~~~Ga~D~~~g~a~~l~~~~~l~-~~~~~~~~~i~~~~~~~EE~g~-~Gs~~ 160 (299)
T 1rtq_A 97 HLDSTIG---SHT-----------NEQSVAPGADDDASGIAAVTEVIRVLS-ENNFQPKRSIAFMAYAAEEVGL-RGSQD 160 (299)
T ss_dssp ECCCCSS---TTC-----------CTTCCCCCTTTTHHHHHHHHHHHHHHH-HTTCCCSEEEEEEEESCGGGTS-HHHHH
T ss_pred ccccCCC---cCc-----------CCCcccCCCcccHHHHHHHHHHHHHHH-HcCCCCCceEEEEEECCccCCc-hhHHH
Confidence 9999983 463 567899999999999999999999999 8887889999999999999997 89999
Q ss_pred HHhccc--ccccceEEEEe
Q 013641 179 FVESNE--FRELNVGFVMD 195 (439)
Q Consensus 179 ~~~~~~--~~~~~~~~v~~ 195 (439)
++++.. ..++++++.+|
T Consensus 161 ~~~~~~~~~~~~~~~i~~D 179 (299)
T 1rtq_A 161 LANQYKSEGKNVVSALQLD 179 (299)
T ss_dssp HHHHHHHTTCEEEEEEECS
T ss_pred HHHhhhhccccEEEEEEec
Confidence 987542 22344445554
No 42
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.77 E-value=3.9e-18 Score=162.80 Aligned_cols=160 Identities=15% Similarity=0.183 Sum_probs=128.8
Q ss_pred CCCCCchhHHHHHHhHhcCcCC-CCCCCCchHHHHHHHHHHhcCCceEEEEecC--------CccEEEEEEcCCCCCCCc
Q 013641 23 GKSHEEREPITRFKQYLRFNTA-HPNPNYTAPVSFLISQAQSIGLQFKTLEFVP--------NKPILLLTWPGSDPSLPS 93 (439)
Q Consensus 23 ~~~~~~~~~i~~l~~lv~ips~-s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~--------~~~nvi~~~~g~~~~~~~ 93 (439)
....+.+++.+.|++|+++.+. ..+.++.++++||.++|+++|++++.+.+.. ...|||++++|.. .+.
T Consensus 19 ~~~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~ 96 (309)
T 3tc8_A 19 VPDFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPEN--SKR 96 (309)
T ss_dssp SCCCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSE
T ss_pred ccccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCC--Cce
Confidence 3456889999999999998764 3345689999999999999999998765431 1479999998853 489
Q ss_pred EEEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCc-
Q 013641 94 ILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGG- 172 (439)
Q Consensus 94 vll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~- 172 (439)
|+|.||+|+|+.++ .+||. .+ ++.+| +|+.|+++|+|++|++++.|+ +.+ ++++|.|++..+||.|.
T Consensus 97 ill~aH~Dsv~~~~----~~p~~--~~--~~~~~-~Ga~D~~sGva~~Le~ar~l~-~~~--~~~~i~f~~~~~EE~Gl~ 164 (309)
T 3tc8_A 97 VLLFAHWDSRPYSD----HDPDP--SK--HRTPL-DGADDGGSGVGALLEIARQIG-QKA--PGIGIDIIFFDAEDYGTP 164 (309)
T ss_dssp EEEEEECCCCSCCT----TCSSG--GG--TTSCC-CCTTTTHHHHHHHHHHHHHHH-HSC--CSSEEEEEEECSCSCSCC
T ss_pred EEEEecccCCCCCC----CCccc--cC--CCccc-cCcccchHhHHHHHHHHHHHH-hCC--CCCcEEEEEECccccccc
Confidence 99999999999874 25775 34 78888 999999999999999999999 764 78999999999999985
Q ss_pred -----------ccCHHHHHhcccc--cccceEEEEec
Q 013641 173 -----------FDGMAKFVESNEF--RELNVGFVMDE 196 (439)
Q Consensus 173 -----------~~G~~~~~~~~~~--~~~~~~~v~~~ 196 (439)
+.|++++.++... .++.+.+.+|.
T Consensus 165 ~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~ 201 (309)
T 3tc8_A 165 EFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDM 201 (309)
T ss_dssp TTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred cccccccccccchhHHHHHhCCCccccceEEEEEecc
Confidence 3799999986432 23455666664
No 43
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.76 E-value=3.4e-17 Score=158.97 Aligned_cols=258 Identities=16% Similarity=0.120 Sum_probs=178.2
Q ss_pred hHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccC----
Q 013641 30 EPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPA---- 105 (439)
Q Consensus 30 ~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~---- 105 (439)
+++++|++|+++||+| +.|.++++|++++|+++|++++.+ ..+||+++++|.++++|+|+|.||||+|+.
T Consensus 4 ~~~~~l~~L~~ips~S--G~E~~v~~~l~~~l~~~g~~~~~D----~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~ 77 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVS--GHEAPVRAYLREKLTPHVDEVVTD----GLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSE 77 (355)
T ss_dssp HHHHHHHHHHTSCCBT--TCCHHHHHHHHHHHGGGSSEEEEC----TTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEE
T ss_pred HHHHHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCEEEEC----CCCeEEEEECCcCCCCCeEEEEeccccccceEEE
Confidence 6789999999999997 789999999999999999988765 578999999876423589999999999932
Q ss_pred -CC---------CCCCCC--------------C-CceeE------------------------e----------------
Q 013641 106 -EP---------DKWSHP--------------P-FSAFH------------------------S---------------- 120 (439)
Q Consensus 106 -~~---------~~w~~~--------------P-f~~~~------------------------~---------------- 120 (439)
.+ .+|... + +.+++ +
T Consensus 78 I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~ 157 (355)
T 3kl9_A 78 IKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRP 157 (355)
T ss_dssp ECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCT
T ss_pred ECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCC
Confidence 00 122110 0 11100 0
Q ss_pred ------------CC-CCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccccc
Q 013641 121 ------------PE-TGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRE 187 (439)
Q Consensus 121 ------------~~-dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 187 (439)
.. ++.+.|+. -|++.+++++|++++.|+ +. +++.+++++|+..||.|+ .|++.... .+.
T Consensus 158 Gd~v~~d~~~~~~~~~~~i~s~~-lDnr~g~~~~l~~l~~l~-~~--~~~~~v~~~ft~qEEvG~-~Ga~~a~~--~~~- 229 (355)
T 3kl9_A 158 GDTIVPDSSAILTANEKNIISKA-WDNRYGVLMVSELAEALS-GQ--KLGNELYLGSNVQEEVGL-RGAHTSTT--KFD- 229 (355)
T ss_dssp TCEEEECCCCEECTTSSEEEESC-HHHHHHHHHHHHHHHHHS-SC--CCSSEEEEEEESCCTTTS-HHHHHHHH--HHC-
T ss_pred CCEEEeccceEEecCCCEEEeec-cccHHHHHHHHHHHHHhh-hc--CCCceEEEEEECccccCc-chhHHHHh--ccC-
Confidence 01 24677774 599999999999999988 54 477899999999999997 77654432 121
Q ss_pred cceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHHhccccCCC
Q 013641 188 LNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSE 267 (439)
Q Consensus 188 ~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 267 (439)
.|+++++|.+
T Consensus 230 pd~~i~~D~~---------------------------------------------------------------------- 239 (355)
T 3kl9_A 230 PEVFLAVDCS---------------------------------------------------------------------- 239 (355)
T ss_dssp CSEEEEEEEE----------------------------------------------------------------------
T ss_pred CCEEEEecCc----------------------------------------------------------------------
Confidence 2333333321
Q ss_pred ceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCCccc
Q 013641 268 VISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMT 347 (439)
Q Consensus 268 ~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 347 (439)
.++. . |+. . -....+..+.+.. . ..
T Consensus 240 ---------~a~d------~----p~~------------------------~-~~lg~G~~i~~~d--------~-~~-- 264 (355)
T 3kl9_A 240 ---------PAGD------V----YGG------------------------Q-GKIGDGTLIRFYD--------P-GH-- 264 (355)
T ss_dssp ---------ECCG------G----GTS------------------------S-CCTTSCEEEEEEE--------T-TE--
T ss_pred ---------cCCC------C----CCc------------------------c-cccCCCcEEEEec--------C-CC--
Confidence 1111 0 221 0 0012333333321 1 01
Q ss_pred cCCCCChHHHHHHHHHHHhCCCCCccccccCCccHHHHHH--hCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHH
Q 013641 348 LTDDSNPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQ--LGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYE 425 (439)
Q Consensus 348 ~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~--~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~ 425 (439)
..|..+.+.+.+++++.+... ......+|||++.+.. .|+|++.+|+... ..|++.|+++++++..+++++.
T Consensus 265 --~~~~~l~~~l~~~a~~~gIp~-q~~~~ggGtDa~~i~~a~~Gipt~~igvp~~---~~Hs~~E~~~~~Di~~~~~ll~ 338 (355)
T 3kl9_A 265 --LLLPGMKDFLLTTAEEAGIKY-QYYCGKGGTDAGAAHLKNGGVPSTTIGVCAR---YIHSHQTLYAMDDFLEAQAFLQ 338 (355)
T ss_dssp --ECCHHHHHHHHHHHHHTTCCE-EEEECSSCCTHHHHTTSTTCCCEEEEEEEEB---SCSSSCEEEEHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHcCCCE-EEECCCcchHHHHHHHhCCCCCEEEEccCcC---CCCCcceEeeHHHHHHHHHHHH
Confidence 124678899999998877544 3333458999988764 6899998886654 5999999999999999999999
Q ss_pred HHHHHhh
Q 013641 426 SVISSLS 432 (439)
Q Consensus 426 ~~l~~~~ 432 (439)
.++..+.
T Consensus 339 ~~l~~l~ 345 (355)
T 3kl9_A 339 ALVKKLD 345 (355)
T ss_dssp HHHHTCC
T ss_pred HHHHHhC
Confidence 9998774
No 44
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.75 E-value=1e-17 Score=159.99 Aligned_cols=159 Identities=13% Similarity=0.138 Sum_probs=112.5
Q ss_pred CCCCchhHHHHHHhHhcCcCCC-CCCCCchHHHHHHHHHHhcCCceEEEEecC--------CccEEEEEEcCCCCCCCcE
Q 013641 24 KSHEEREPITRFKQYLRFNTAH-PNPNYTAPVSFLISQAQSIGLQFKTLEFVP--------NKPILLLTWPGSDPSLPSI 94 (439)
Q Consensus 24 ~~~~~~~~i~~l~~lv~ips~s-~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~--------~~~nvi~~~~g~~~~~~~v 94 (439)
+..+.+++.+.|++|++|++.. .+.++.++++||.++|+++|++++.+.+.. ...|||++++|.. .+.|
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~i 99 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPES--KKRI 99 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEE
T ss_pred CCCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCC--CceE
Confidence 4568899999999999998753 245689999999999999999988765421 1479999998853 4899
Q ss_pred EEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCc--
Q 013641 95 LFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGG-- 172 (439)
Q Consensus 95 ll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~-- 172 (439)
+|.||+|+|+.++ .+|+. .. ++. +++|+.|+++|+|++|++++.|+ +.+ ++++|.|++..+||.|.
T Consensus 100 ll~aH~Dsv~~~~----~~p~~--~~--~~~-~~~GA~D~~sGva~~Le~ar~l~-~~~--~~~~i~fv~~~~EE~Gl~~ 167 (314)
T 3gux_A 100 LLCAHWDSRPYAD----NDPDP--KN--HHT-PILGVNDGASGVGVLLEIARQIQ-KEQ--PALGIDIVFFDSEDYGIPE 167 (314)
T ss_dssp EEEEECCCCC-----------------------------CHHHHHHHHHHHHHHH-HSC--CSSEEEEEEECSCCC----
T ss_pred EEEccccCCCcCC----CCccc--cc--CCc-ccCCCcccHHHHHHHHHHHHHHH-hCC--CCCcEEEEEECCccccccc
Confidence 9999999999864 24543 22 444 45999999999999999999999 764 78999999999999985
Q ss_pred -----------ccCHHHHHhcccc--cccceEEEEec
Q 013641 173 -----------FDGMAKFVESNEF--RELNVGFVMDE 196 (439)
Q Consensus 173 -----------~~G~~~~~~~~~~--~~~~~~~v~~~ 196 (439)
..|++++.++... .++.+.+.+|.
T Consensus 168 ~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm 204 (314)
T 3gux_A 168 FYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDM 204 (314)
T ss_dssp -------CTTSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred cccccccccccchhHHHHHhCCcccccceeEEEEEec
Confidence 3789999876432 23455666654
No 45
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.70 E-value=4.5e-17 Score=157.29 Aligned_cols=137 Identities=16% Similarity=0.187 Sum_probs=109.7
Q ss_pred CCchhH-HHHHHhHhcCcCCCCCCCCchHHHHHHHHHHh--cCCceEEEEecC-------CccEEEEEEcCCCCCCCcEE
Q 013641 26 HEEREP-ITRFKQYLRFNTAHPNPNYTAPVSFLISQAQS--IGLQFKTLEFVP-------NKPILLLTWPGSDPSLPSIL 95 (439)
Q Consensus 26 ~~~~~~-i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~--~G~~~~~~~~~~-------~~~nvi~~~~g~~~~~~~vl 95 (439)
.+.+++ .++|++|+..+... +.++.++++||.++|++ +|++++.+.... ...|||++++|+ ..+.|+
T Consensus 28 ~~~~~~~~~~l~~L~~~r~~~-s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~--~~~~i~ 104 (329)
T 2afw_A 28 TSISEMWQNDLQPLLIERYPG-SPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPT--AKRHLV 104 (329)
T ss_dssp CCHHHHHHHTTGGGCSCCCTT-SHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTT--SSEEEE
T ss_pred cCHHHHHHHHHHHHcCCCCCC-CHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCC--CCcEEE
Confidence 467888 89999997555543 34566899999999999 999988776432 258999999875 348999
Q ss_pred EeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhc--------CCCCCeeEEEEEecC
Q 013641 96 FNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVK--------NFKPIRTVHASYVPD 167 (439)
Q Consensus 96 l~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~--------~~~~~~~i~~~~~~~ 167 (439)
|.||+|+||.+ .| ++.+ |+|+.|+++|+|++|++++.|+ +. +.+++++|.|++..+
T Consensus 105 l~aH~Dsv~~~--~~------------~~~~-~~Ga~D~~sGva~~le~ar~l~-~~~~~~~~~~g~~~~~~i~~~~~~~ 168 (329)
T 2afw_A 105 LACHYDSKYFS--HW------------NNRV-FVGATDSAVPCAMMLELARALD-KKLLSLKTVSDSKPDLSLQLIFFDG 168 (329)
T ss_dssp EEEECCCCCCC--CB------------TTBC-CCCTTTTHHHHHHHHHHHHHTH-HHHHTTC------CCEEEEEEEESC
T ss_pred EEEeccCCCcC--cc------------cCcC-CCCcccchhhHHHHHHHHHHHH-HHHhhhcccccCCCCccEEEEEecC
Confidence 99999999975 34 3444 8999999999999999999998 65 346889999999999
Q ss_pred ccc--------CcccCHHHHHhc
Q 013641 168 EEI--------GGFDGMAKFVES 182 (439)
Q Consensus 168 EE~--------g~~~G~~~~~~~ 182 (439)
||. |. .|+++++++
T Consensus 169 EE~~~~~~~~~gl-~Gs~~~~~~ 190 (329)
T 2afw_A 169 EEAFLHWSPQDSL-YGSRHLAAK 190 (329)
T ss_dssp CSCSSSCCSSSSC-HHHHHHHHH
T ss_pred cccccccCCCccc-hhHHHHHHH
Confidence 998 54 799999875
No 46
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.65 E-value=5e-15 Score=143.53 Aligned_cols=255 Identities=16% Similarity=0.165 Sum_probs=172.4
Q ss_pred hHHHHHHhHhcCcCCCCCCCCc-hHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccC---
Q 013641 30 EPITRFKQYLRFNTAHPNPNYT-APVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPA--- 105 (439)
Q Consensus 30 ~~i~~l~~lv~ips~s~~~~e~-~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~--- 105 (439)
.++++|++|+++||+| +.|. ++++|++++|+++|++++.+ ..+||+++++|+ + |+|+|.||||+|+.
T Consensus 10 ~~~~~l~~L~~ipspS--G~E~~~v~~~l~~~l~~~g~~~~~D----~~GNvi~~~~g~--~-~~v~l~aHmDtVg~mV~ 80 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVS--GYEHLGIRDIVVDVLKEVADEVKVD----KLGNVIAHFKGS--S-PRIMVAAHMDKIGVMVN 80 (354)
T ss_dssp CCHHHHHHHHHSCCBT--TCGGGTHHHHHHHHHHTTCSEEEEC----TTCCEEEEECCS--S-SEEEEECCCCBCEEEEE
T ss_pred HHHHHHHHHHhCCCCC--cccHHHHHHHHHHHHHHhCCEEEEc----CCCeEEEEEcCC--C-CEEEEEecccccceeEE
Confidence 5689999999999997 7899 99999999999999987765 578999999774 2 89999999999932
Q ss_pred --CC---------CCCCC------------------------CC--------------Cc-eeEe---------------
Q 013641 106 --EP---------DKWSH------------------------PP--------------FS-AFHS--------------- 120 (439)
Q Consensus 106 --~~---------~~w~~------------------------~P--------------f~-~~~~--------------- 120 (439)
.+ .+|.. +| +. ..++
T Consensus 81 ~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~GI~ 160 (354)
T 2vpu_A 81 HIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKEEAEEMGFR 160 (354)
T ss_dssp EECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC---------CCGGGCCEECSCSSHHHHHHTTCC
T ss_pred EECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCcccccccCCCcceEEEEecCCCHHHHHhcCCC
Confidence 00 01210 00 00 0000
Q ss_pred -------------CCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcccccc
Q 013641 121 -------------PETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNEFRE 187 (439)
Q Consensus 121 -------------~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~~~~ 187 (439)
.+++.+.|+. -|++.+++++|++++.|+ + ++.+++++|+..||.|+ .|++.... .+.
T Consensus 161 ~Gd~v~~d~~~~~~~~~~i~s~~-lDnr~g~~~~l~~l~~l~-~----~~~~v~~~ft~qEEVG~-~ga~~aa~--~i~- 230 (354)
T 2vpu_A 161 VGTVGEFAPNFTRLNEHRFATPY-LDDRICLYAMIEAARQLG-D----HEADIYIVGSVQEEVGL-RGARVASY--AIN- 230 (354)
T ss_dssp TTCEEEECCCCEECSSSEEECTT-HHHHHHHHHHHHHHHHCC-C----CSSEEEEEECSCCTTTS-HHHHHHHH--HHC-
T ss_pred CCCEEEEeeEEEEeCCceEEEec-CccHHHHHHHHHHHHHhh-c----CCCeEEEEEECCcccCc-cchhhhhc--ccC-
Confidence 0235666665 499999999999999887 3 67899999999999997 77654322 222
Q ss_pred cceEEEEecCCcCCCCcceEEeeccceEEEEEEEeeCCCCcCCCCCCcHHHHHHHHHHHHHccccchhHHHHhccccCCC
Q 013641 188 LNVGFVMDEGQASTNDDFRVFYADRSPWHLIIRAKGAPGHGSRMFDNGAMENLMKSVEMITKFRESQFDVVKAGRAANSE 267 (439)
Q Consensus 188 ~~~~~v~~~g~~~p~~~~~i~~~~~G~~~~~v~v~G~~~Hs~~p~~gnai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 267 (439)
.|+++++|.+ |+..|... + .
T Consensus 231 pd~~i~~Dv~-----------------------------~a~dp~~~--------------~---~-------------- 250 (354)
T 2vpu_A 231 PEVGIAMDVT-----------------------------FAKQPHDK--------------G---K-------------- 250 (354)
T ss_dssp CSEEEEEEEE-----------------------------ECCCTTST--------------T---C--------------
T ss_pred CCEEEEeccc-----------------------------ccCCCCcc--------------c---c--------------
Confidence 3445555421 11100000 0 0
Q ss_pred ceEeeEeEEeecccCCCCcccccccCceEEEEeeecCCCCCHHHHHHHHHHHhcccCCCceEEEeeccccccCCCCCccc
Q 013641 268 VISVNLVYLKAGIPSPTGFVMNMQPSEAEAGFDARLPPTVDPDLIRRRIAEEWAPAIRNMSYEIIEKGPIRDYKGRPLMT 347 (439)
Q Consensus 268 ~~t~~~~~i~gg~~~~~g~~~n~iP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 347 (439)
+...+..| | . ++ . . .
T Consensus 251 ----~~~~lg~G------------p---v--~d--------------------------------~--------~--~-- 265 (354)
T 2vpu_A 251 ----IVPELGKG------------P---V--MD--------------------------------V--------G--P-- 265 (354)
T ss_dssp ----CCCCTTSC------------C---E--EE--------------------------------E--------S--T--
T ss_pred ----cCceECCc------------c---e--Ec--------------------------------C--------C--C--
Confidence 00011111 1 0 01 1 0 1
Q ss_pred cCCCCChHHHHHHHHHHHhCCCCCcccc-cc-CCccHHHHH--HhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHH
Q 013641 348 LTDDSNPWWSVFKRAVTSAGGKLGKPEI-LA-STTDARYMR--QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEV 423 (439)
Q Consensus 348 ~~~~~~~~~~~l~~a~~~~~~~~~~~~~-~~-~~tD~~~~~--~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~ 423 (439)
..|..+.+.+++++++.+... .... .. +|||++.+. ..|+|++.+|+... ..|++.|+++++++..++++
T Consensus 266 --~~~~~l~~~l~~~a~~~gIp~-q~~~~~g~gGtDa~~i~~a~~Gipt~~Igvp~~---~~Hs~~E~~~~~D~~~~~~l 339 (354)
T 2vpu_A 266 --NINPKLRAFADEVAKKYEIPL-QVEPSPRPTGTDANVMQINKEGVATAVLSIPIR---YMHSQVELADARDVDNTIKL 339 (354)
T ss_dssp --TSCHHHHHHHHHHHHHTTCCC-EEEECCSCCSSTHHHHHTSTTCCEEEEEEEEEB---STTSTTCEEEHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHcCCCc-EEEeCCCCCccHHHHHHHhcCCCCEEEECcccc---cCcCcceEeeHHHHHHHHHH
Confidence 124578888888888877543 3222 33 699998775 36899998887654 59999999999999999999
Q ss_pred HHHHHHHhhcc
Q 013641 424 YESVISSLSSF 434 (439)
Q Consensus 424 ~~~~l~~~~~~ 434 (439)
+..++..+...
T Consensus 340 l~~~l~~l~~~ 350 (354)
T 2vpu_A 340 AKALLEELKPM 350 (354)
T ss_dssp HHHHHHHCCCC
T ss_pred HHHHHHhccHh
Confidence 99999887644
No 47
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.56 E-value=1.4e-13 Score=132.42 Aligned_cols=131 Identities=12% Similarity=0.109 Sum_probs=98.8
Q ss_pred hHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecCCccEEEEEEcCCCCCCCcEEEeeecccccC----
Q 013641 30 EPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVPNKPILLLTWPGSDPSLPSILFNSHLDSVPA---- 105 (439)
Q Consensus 30 ~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~---- 105 (439)
.+.++|++|+++|++| +.|.+++++++++++++|.+++.+ ..+||++.+ |. ++|+|+|.||||+|..
T Consensus 12 ~~~~~l~~L~~~pspS--G~E~~v~~~i~~~l~~~~~e~~~D----~~Gnvi~~~-g~--~~~~v~l~aHmDevG~mV~~ 82 (343)
T 3isx_A 12 HMKELIRKLTEAFGPS--GREEEVRSIILEELEGHIDGHRID----GLGNLIVWK-GS--GEKKVILDAHIDEIGVVVTN 82 (343)
T ss_dssp CCHHHHHHHHHSCCBT--TCCHHHHHHHHHHHTTTCSEEEEC----TTCCEEEEE-CC--CSSEEEEEEECCBCEEEEEE
T ss_pred HHHHHHHHHHhCCCCC--CchHHHHHHHHHHHHHhCCEEEEC----CCCCEEEEE-CC--CCCEEEEEecccccceEEEE
Confidence 4568899999999997 899999999999999999887765 578999998 43 3589999999999932
Q ss_pred -CC---------CCCCCC-----C------CceeE------------------------e--------------------
Q 013641 106 -EP---------DKWSHP-----P------FSAFH------------------------S-------------------- 120 (439)
Q Consensus 106 -~~---------~~w~~~-----P------f~~~~------------------------~-------------------- 120 (439)
.+ .+|... . +.+++ +
T Consensus 83 I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~~~~l~iD~g~~s~ee~~~~I~vGd~v~ 162 (343)
T 3isx_A 83 VDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLSFDKLFIDIGANSREEAQKMCPIGSFGV 162 (343)
T ss_dssp ECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCCGGGEEEECSCSSHHHHHHHSCTTCEEE
T ss_pred ECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCCCcceEEEEeCCCCHHHHHhcCCCCCEEE
Confidence 00 122100 0 11111 0
Q ss_pred ------CCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHH
Q 013641 121 ------PETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMA 177 (439)
Q Consensus 121 ------~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 177 (439)
..++.+.|++- ||+.+++++|++++.++ . +.+++++|+..||.|+ .|++
T Consensus 163 ~~~~~~~~~~~i~s~~l-DdR~g~~~~l~~l~~l~-~-----~~~~~~~ft~qEEVG~-~Ga~ 217 (343)
T 3isx_A 163 YDSGFVEVSGKYVSKAM-DDRIGCAVIVEVFKRIK-P-----AVTLYGVFSVQEEVGL-VGAS 217 (343)
T ss_dssp ESCCCEEETTEEEESCH-HHHHHHHHHHHHHHHCC-C-----SSEEEEEEECCCCTTS-CCST
T ss_pred ecCceEEeccEEEeccC-ccHHHHHHHHHHHHhcc-C-----CCeEEEEEECCcccCc-hhHH
Confidence 01256777765 99999999999998876 2 5799999999999997 7764
No 48
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.55 E-value=5.5e-14 Score=134.50 Aligned_cols=158 Identities=12% Similarity=0.143 Sum_probs=117.8
Q ss_pred CCCCchhHHHHHHhHhcCcC-CCCCCCCchHHHHHHHHHHhcCCceEEEEecC--------CccEEEEEEcCCCCCCCcE
Q 013641 24 KSHEEREPITRFKQYLRFNT-AHPNPNYTAPVSFLISQAQSIGLQFKTLEFVP--------NKPILLLTWPGSDPSLPSI 94 (439)
Q Consensus 24 ~~~~~~~~i~~l~~lv~ips-~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~--------~~~nvi~~~~g~~~~~~~v 94 (439)
+.-+.+++.+.+++++++.. +.++.+..++++||.+.|+++|++++.+.+.. ...|||++++|+. .+.|
T Consensus 20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~--~~~i 97 (309)
T 4fuu_A 20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPES--KKRI 97 (309)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEE
T ss_pred CccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCC--CceE
Confidence 34578999999999999854 44445678999999999999999998765431 1359999999864 4799
Q ss_pred EEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCc--
Q 013641 95 LFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGG-- 172 (439)
Q Consensus 95 ll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~-- 172 (439)
+|.||+|++|..+.... .. +......|+.|+.+|+|++|++++.|. +. +++++|.|+|..+||.|.
T Consensus 98 ~l~aH~Ds~~~~~~~~~-------~~--~~~~~~~GA~D~aSG~a~lLE~ar~l~-~~--~~~~~i~~~~~~~EE~Gl~~ 165 (309)
T 4fuu_A 98 ALFAHWDTRPWADNDAD-------EK--NHHTPILGANDGASGVGALLEIARLVN-QQ--QPELGIDIIFLDAEDYGTPQ 165 (309)
T ss_dssp EEEEECCCCSCCTTCSS-------GG--GTTSCCCCTTTTHHHHHHHHHHHHHHH-HS--CCSSEEEEEEECSSSCCCCT
T ss_pred EEEeecCCCCCCCCccc-------cc--cccCCcCCcccCchhHHHHHHHHHHHh-hc--CCCCceEEEeecccccCccc
Confidence 99999999987642110 01 122223599999999999999999999 65 578999999999999883
Q ss_pred -----------ccCHHHHHhcccc--cccceEEEEe
Q 013641 173 -----------FDGMAKFVESNEF--RELNVGFVMD 195 (439)
Q Consensus 173 -----------~~G~~~~~~~~~~--~~~~~~~v~~ 195 (439)
..|.++++++... ..+.+.+.+|
T Consensus 166 ~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlD 201 (309)
T 4fuu_A 166 FYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLD 201 (309)
T ss_dssp TCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEEC
T ss_pred cccchhhhhhhhcchhHHHhcccccCcceEEEEeee
Confidence 2578888875432 2344455554
No 49
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.52 E-value=3e-14 Score=136.53 Aligned_cols=136 Identities=14% Similarity=0.122 Sum_probs=105.0
Q ss_pred CCchhHHH-HHHhHhcCcCCCCCCCCchHHHHHHHHHHhc--CCceEEEEecC-------CccEEEEEEcCCCCCCCcEE
Q 013641 26 HEEREPIT-RFKQYLRFNTAHPNPNYTAPVSFLISQAQSI--GLQFKTLEFVP-------NKPILLLTWPGSDPSLPSIL 95 (439)
Q Consensus 26 ~~~~~~i~-~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~--G~~~~~~~~~~-------~~~nvi~~~~g~~~~~~~vl 95 (439)
.+.+++.+ +|+.+ -++-...+.++.++++||.++|+++ |++++.+.+.. ...|||++++|+. .+.|+
T Consensus 36 ~~~~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~--~~~iv 112 (330)
T 3pb6_X 36 LDPQRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRA--ARHLT 112 (330)
T ss_dssp CCHHHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTS--SEEEE
T ss_pred CCHHHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCC--CceEE
Confidence 35566665 56666 4444544567889999999999999 89888776531 1379999998864 47899
Q ss_pred EeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhc-----CCCCCeeEEEEEecCccc
Q 013641 96 FNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVK-----NFKPIRTVHASYVPDEEI 170 (439)
Q Consensus 96 l~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~-----~~~~~~~i~~~~~~~EE~ 170 (439)
+.||+|+|+..+ ++ -...|+.|+.+|+|++|++++.|. +. +.+++++|.|+|..+||.
T Consensus 113 l~aH~Dsv~~~~---------------g~-~~~~GA~D~asGva~lLe~ar~l~-~~~~~~~~~~~~~~i~fv~~~~EE~ 175 (330)
T 3pb6_X 113 LACHYDSKLFPP---------------GS-TPFVGATDSAVPCALLLELAQALD-LELSRAKKQAAPVTLQLLFLDGEEA 175 (330)
T ss_dssp EEEECCCCCCCT---------------TS-CCCCCTTTTHHHHHHHHHHHHHTH-HHHHHHHHTTCSEEEEEEEESCCSC
T ss_pred EEeccCCCCCCC---------------CC-cCcCCCcCChHHHHHHHHHHHHHH-HHHhhcccCCCCCcEEEEEEcCccc
Confidence 999999997531 11 124599999999999999999998 63 346899999999999998
Q ss_pred --------CcccCHHHHHhc
Q 013641 171 --------GGFDGMAKFVES 182 (439)
Q Consensus 171 --------g~~~G~~~~~~~ 182 (439)
|. .|+++++++
T Consensus 176 f~~w~~~~gl-~GS~~~a~~ 194 (330)
T 3pb6_X 176 LKEWGPKDSL-YGSRHLAQL 194 (330)
T ss_dssp SSCCSTTSSC-HHHHHHHHH
T ss_pred ccccCCCCCC-ccHHHHHHH
Confidence 75 899999864
No 50
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.49 E-value=2.4e-13 Score=130.28 Aligned_cols=133 Identities=14% Similarity=0.081 Sum_probs=103.8
Q ss_pred hHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecC--------CccEEEEEEcCCCCCCCcEEEeeecc
Q 013641 30 EPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVP--------NKPILLLTWPGSDPSLPSILFNSHLD 101 (439)
Q Consensus 30 ~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~--------~~~nvi~~~~g~~~~~~~vll~aH~D 101 (439)
.+-+.|..++ +|-+.++.+..++++||.+.|+++|++++.+.+.. ...|||++++|+. .+.|+|.||+|
T Consensus 12 ~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~--~~~vvl~aHyD 88 (312)
T 4f9u_A 12 HFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQA--QNFLALACHYD 88 (312)
T ss_dssp HHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTS--SEEEEEEEECC
T ss_pred HHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCC--CceEEEEEEEe
Confidence 3444566654 67776566788999999999999999998776531 1259999998864 47899999999
Q ss_pred cccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhc-----CCCCCeeEEEEEecCcccC-----
Q 013641 102 SVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVK-----NFKPIRTVHASYVPDEEIG----- 171 (439)
Q Consensus 102 tvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~-----~~~~~~~i~~~~~~~EE~g----- 171 (439)
+++..+. ++ ..|+.|+.+|+|++|++++.|. +. +.+++++|.|+|..+||.|
T Consensus 89 s~~~~~~----~~-------------~~GA~DnaSGvA~lLElAR~l~-~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~ 150 (312)
T 4f9u_A 89 SKYFPND----PG-------------FVGATDSAVPCAILLNTAKTLG-AYLQKEFRNRSDVGLMLIFFDGEEAFKEWTD 150 (312)
T ss_dssp CCCCTTC----TT-------------CCCTTTTHHHHHHHHHHHHHTH-HHHTTGGGSCSSEEEEEEEESCCSCSSSCSS
T ss_pred cCCCCCC----CC-------------CCCccCCcccHHHHHHHHHHHH-HHHHhhccCCCCceEEEEEecCccccccCCc
Confidence 9876431 11 2399999999999999999997 52 4468899999999999987
Q ss_pred --cccCHHHHHhcc
Q 013641 172 --GFDGMAKFVESN 183 (439)
Q Consensus 172 --~~~G~~~~~~~~ 183 (439)
+..|+++++++.
T Consensus 151 ~~~L~GS~~~a~~~ 164 (312)
T 4f9u_A 151 ADSVYGSKHLAAKL 164 (312)
T ss_dssp SSSCHHHHHHHHHH
T ss_pred cccccChHHHHHHH
Confidence 137999999864
No 51
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.48 E-value=1.8e-13 Score=131.88 Aligned_cols=148 Identities=10% Similarity=0.090 Sum_probs=112.5
Q ss_pred CchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecC--------CccEEEEEEcCCCCCCCcEEEee
Q 013641 27 EEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVP--------NKPILLLTWPGSDPSLPSILFNS 98 (439)
Q Consensus 27 ~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~--------~~~nvi~~~~g~~~~~~~vll~a 98 (439)
+...+-+.|..+. +|-+.++.+..++++||.+.|+++|++++.+.+.. ...|||++++|+. .+.|+|.|
T Consensus 36 ~~~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~--~~~i~l~a 112 (330)
T 4fai_A 36 DKLHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNA--ERYLVLSC 112 (330)
T ss_dssp CHHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTC--SEEEEEEE
T ss_pred HHHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCC--CcEEEEEE
Confidence 4455556666664 68776667788999999999999999998776532 1249999998753 47899999
Q ss_pred ecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhc---CCCCCeeEEEEEecCcccCc---
Q 013641 99 HLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVK---NFKPIRTVHASYVPDEEIGG--- 172 (439)
Q Consensus 99 H~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~---~~~~~~~i~~~~~~~EE~g~--- 172 (439)
|+|+++..+. + ..|+.|+.+|+|++|++++.|. +. +.+++++|.|+|..+||.|.
T Consensus 113 HyDs~~~~~~--------------~----~~GA~DnasG~A~lLE~Ar~l~-~~~~~~~~p~rtI~fv~fdgEE~Gl~~~ 173 (330)
T 4fai_A 113 HYDSKYMPGV--------------E----FLGATDSAVPCAMLLNLAQVLQ-EQLKPLKKSKLSLMLLFFDGEEAFEEWG 173 (330)
T ss_dssp ECCCCCCTTS--------------C----CCCTTTTHHHHHHHHHHHHHTH-HHHGGGGTSSEEEEEEEESCCSCSSSCB
T ss_pred eecccccccC--------------C----CCCCCCccHhHHHHHHHHHHHH-HhhhccCCCCccEEEEEecccccccccc
Confidence 9999876431 1 2399999999999999999997 52 45688999999999999883
Q ss_pred ----ccCHHHHHhcc----cccccceEEEEec
Q 013641 173 ----FDGMAKFVESN----EFRELNVGFVMDE 196 (439)
Q Consensus 173 ----~~G~~~~~~~~----~~~~~~~~~v~~~ 196 (439)
..|+++++++. ....+.+.+.+|.
T Consensus 174 ~~~~llGS~~~a~~~~~~~~~~~i~~~inlDm 205 (330)
T 4fai_A 174 PKDSIYGARHLAKKWHHEGKLDRIDMLVLLDL 205 (330)
T ss_dssp TTBSCHHHHHHHHHHHHTTCSTTEEEEEEECS
T ss_pred ccchhhhhHHHHhcchhccchhceeEEEEecc
Confidence 25999998753 2334555566653
No 52
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.44 E-value=3.3e-13 Score=103.91 Aligned_cols=81 Identities=47% Similarity=0.997 Sum_probs=71.9
Q ss_pred ChHHHHHHHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHHHHHHHhh
Q 013641 353 NPWWSVFKRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYESVISSLS 432 (439)
Q Consensus 353 ~~~~~~l~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~~~l~~~~ 432 (439)
+++++.+.+++++. +..+.+...+|+||+++|...|+|++.|||+..+...+|++||+++++++.+++++|++++.+++
T Consensus 1 ~~~v~~l~~a~~~~-g~~~~~~~~~g~TDar~~~~~gip~v~fGPg~~~~~~~H~~dE~v~i~~l~~~~~iy~~~i~~~~ 79 (88)
T 1q7l_B 1 NPWWAAFSRVCKDM-NLTLEPEIMPAAGDNRYIRAVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALA 79 (88)
T ss_dssp CHHHHHHHHHHHHT-TCCEEEEECCSCSHHHHHHHTTCCEEEECCCCSCCCCTTSTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHc-CCeeEeeeeceeCcHHHHHHcCCCEEEECCCCCCcccccCCCCeeEHHHHHHHHHHHHHHHHHHH
Confidence 47899999999998 55557777889999999998999999999997533479999999999999999999999999998
Q ss_pred cc
Q 013641 433 SF 434 (439)
Q Consensus 433 ~~ 434 (439)
+.
T Consensus 80 ~~ 81 (88)
T 1q7l_B 80 SV 81 (88)
T ss_dssp TC
T ss_pred cC
Confidence 75
No 53
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.15 E-value=2.7e-10 Score=113.59 Aligned_cols=120 Identities=19% Similarity=0.108 Sum_probs=87.3
Q ss_pred chHHHHHHHHHH---h--cCCceEEEE-ecCCccEEEEEEcCCCC---CCCcEEEeeecccccCCCCCCCCCCCceeEeC
Q 013641 51 TAPVSFLISQAQ---S--IGLQFKTLE-FVPNKPILLLTWPGSDP---SLPSILFNSHLDSVPAEPDKWSHPPFSAFHSP 121 (439)
Q Consensus 51 ~~~~~~l~~~l~---~--~G~~~~~~~-~~~~~~nvi~~~~g~~~---~~~~vll~aH~Dtvp~~~~~w~~~Pf~~~~~~ 121 (439)
.+.+++|.++++ + .++.++... ......|||++++|+++ ..+.|++.+|+|+|+.+
T Consensus 171 ~~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g--------------- 235 (421)
T 2ek8_A 171 KQEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKA--------------- 235 (421)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTC---------------
T ss_pred HHHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCC---------------
Confidence 345677888884 2 122222111 00125799999998632 35889999999999754
Q ss_pred CCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhccc---ccccceEEEEec
Q 013641 122 ETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESNE---FRELNVGFVMDE 196 (439)
Q Consensus 122 ~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~~---~~~~~~~~v~~~ 196 (439)
+|+.|+++|++++|++++.|+ +. +++++|+|+++.+||.|. .|+++++++.. ..++.+.+.+|.
T Consensus 236 -------~Ga~D~~~G~a~~le~~~~l~-~~--~~~~~i~~~~~~~EE~g~-~Gs~~~~~~~~~~~~~~~~~~in~D~ 302 (421)
T 2ek8_A 236 -------PGANDDASGVAVTLELARVMS-KL--KTDTELRFITFGAEENGL-IGSKKYAASLSEDEIKRTIGMFQLDM 302 (421)
T ss_dssp -------CCTTTTHHHHHHHHHHHHHHT-TS--CCSSEEEEEEESSSTTTS-HHHHHHHTTCCHHHHHHEEEEEEECS
T ss_pred -------CCCCCCcHhHHHHHHHHHHHh-cc--CCCceEEEEEECCccccc-hhHHHHHHhCccchhhcEEEEEEecc
Confidence 489999999999999999999 64 578999999999999997 89999998632 223455566654
No 54
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.12 E-value=1.3e-10 Score=116.51 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=84.8
Q ss_pred chHHHHHHHHHHhcC-CceEEE----Ee-cCCccEEEEEEcCCCCCCCcEEEeeecccccCCCCCCCCCCCceeEeCCCC
Q 013641 51 TAPVSFLISQAQSIG-LQFKTL----EF-VPNKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETG 124 (439)
Q Consensus 51 ~~~~~~l~~~l~~~G-~~~~~~----~~-~~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg 124 (439)
.+.++.|.+.++.-. +.++.. .. .....|||++++|+.+..+.|+|.+|+|+++.+
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g------------------ 264 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDEG------------------ 264 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSSS------------------
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCCC------------------
Confidence 456677777775421 222211 00 113579999999875334789999999999754
Q ss_pred EEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHHHHhcc
Q 013641 125 QIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAKFVESN 183 (439)
Q Consensus 125 ~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 183 (439)
+|+.|+++|++++|++++.|+ +.+.+++++|.|+++.+||.|. .|+++++++.
T Consensus 265 ----~Ga~D~~sG~a~~le~a~~l~-~~~~~~~~~i~f~~~~~EE~gl-~Gs~~~~~~~ 317 (444)
T 3iib_A 265 ----TGAIDDGAGVAIVTAAAKHIL-DLPQKPERTIRVVLYAAEELGL-LGGKTYAKEH 317 (444)
T ss_dssp ----CCTTTTHHHHHHHHHHHHHHH-TSSSCCSEEEEEEEESCGGGTS-HHHHHHHHHT
T ss_pred ----CCCccchHHHHHHHHHHHHHH-hcCCCCCCeEEEEEECCcccCC-cCHHHHHHhh
Confidence 388999999999999999999 8887899999999999999997 8999999864
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.70 E-value=1.8e-08 Score=105.52 Aligned_cols=82 Identities=24% Similarity=0.201 Sum_probs=70.4
Q ss_pred CccEEEEEEcCCCCCCCcEEEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHh---c
Q 013641 76 NKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILV---K 152 (439)
Q Consensus 76 ~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~---~ 152 (439)
...|||++++|+....+.|++.+|+|+++. |+.|+.+|++++|++++.|. + .
T Consensus 311 ~~~NVi~~i~G~~~~~~~vllgaH~Ds~~~------------------------Ga~D~~sG~a~lLe~ar~l~-~~~~~ 365 (707)
T 3fed_A 311 RIYNVVGTIRGSVEPDRYVILGGHRDSWVF------------------------GAIDPTSGVAVLQEIARSFG-KLMSK 365 (707)
T ss_dssp EEEEEEEEECCSSEEEEEEEEEEECCCSSS------------------------CTTTTHHHHHHHHHHHHHHH-HHHHT
T ss_pred EEEEEEEEEeCCCCCCceEEEeccccCCCC------------------------CCccCcHHHHHHHHHHHHHH-hhhhc
Confidence 357999999987533478999999999853 56799999999999999987 5 4
Q ss_pred CCCCCeeEEEEEecCcccCcccCHHHHHhcc
Q 013641 153 NFKPIRTVHASYVPDEEIGGFDGMAKFVESN 183 (439)
Q Consensus 153 ~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 183 (439)
+.+++++|+|+++.+||.|. .|.++++++.
T Consensus 366 g~~p~r~I~f~~~~~EE~Gl-~GS~~~~~~~ 395 (707)
T 3fed_A 366 GWRPRRTIIFASWDAEEFGL-LGSTEWAEEN 395 (707)
T ss_dssp TCCCSEEEEEEEESCGGGTS-HHHHHHHHHH
T ss_pred cCCCCCCEEEEEeCCccccc-hhHHHHHHhc
Confidence 67899999999999999997 8999999864
No 56
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.68 E-value=3.5e-08 Score=102.25 Aligned_cols=82 Identities=11% Similarity=0.124 Sum_probs=70.5
Q ss_pred CccEEEEEEcCCCCCCCcEEEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhc---
Q 013641 76 NKPILLLTWPGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVK--- 152 (439)
Q Consensus 76 ~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~--- 152 (439)
...|||++++|+....+.|++.+|+|++.. |+.|+.+|++++|++++.|. +.
T Consensus 265 ~~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~------------------------Ga~D~~sG~a~lLe~ar~l~-~~~~~ 319 (640)
T 3kas_A 265 KILNIFGVIKGFVEPDHYVVVGAQRDAWGP------------------------GAAKSGVGTALLLKLAQMFS-DMVLK 319 (640)
T ss_dssp EEEEEEEEECCSSEEEEEEEEEEECCCSSC------------------------CTTTTHHHHHHHHHHHHHHH-HHHHT
T ss_pred eEEEEEEEEeCCcCCCCceeeecccCCCCC------------------------CCCcCcHHHHHHHHHHHHHH-Hhhhh
Confidence 357999999997322478999999999832 67799999999999999998 64
Q ss_pred -CCCCCeeEEEEEecCcccCcccCHHHHHhcc
Q 013641 153 -NFKPIRTVHASYVPDEEIGGFDGMAKFVESN 183 (439)
Q Consensus 153 -~~~~~~~i~~~~~~~EE~g~~~G~~~~~~~~ 183 (439)
+.+++++|+|++..+||.|. .|+++++++.
T Consensus 320 ~g~~p~r~I~f~~~~~EE~gl-~GS~~~~~~~ 350 (640)
T 3kas_A 320 DGFQPSRSIIFASWSAGDFGS-VGATEWLEGY 350 (640)
T ss_dssp SCCCCSEEEEEEEESSGGGTS-HHHHHHHHHT
T ss_pred cCCCCCCcEEEEEECCcccCc-hhHHHHHHhh
Confidence 67899999999999999997 8999999864
No 57
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=96.49 E-value=0.014 Score=56.40 Aligned_cols=82 Identities=13% Similarity=0.137 Sum_probs=60.7
Q ss_pred EEEEEE--cCCCCCCCcEEEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCC
Q 013641 79 ILLLTW--PGSDPSLPSILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKP 156 (439)
Q Consensus 79 nvi~~~--~g~~~~~~~vll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~ 156 (439)
..++++ +|.. .+.|+|.+|+|... ++.|+-+|+|++++.++.|+ +. ++
T Consensus 167 l~y~e~~ipG~t--~~~IllsaH~cHP~-------------------------~ANDNaSG~a~lleLar~l~-~~--~~ 216 (435)
T 3k9t_A 167 LTYGEYYIRGEL--EEEILLTTYTCHPS-------------------------MCNDNLSGVALITFIAKALS-KL--KT 216 (435)
T ss_dssp EEEEEEEECCSS--SCEEEEEEECCCCS-------------------------CTTTTHHHHHHHHHHHHHHT-TS--CC
T ss_pred eEEEEEEecCCC--CCEEEEEEEcCCCC-------------------------CCCccchHHHHHHHHHHHHh-cC--CC
Confidence 445555 7853 48999999999621 36688999999999999998 53 57
Q ss_pred CeeEEEEEecCcccCcccCHHHHHhcc--cccccceEEEEe
Q 013641 157 IRTVHASYVPDEEIGGFDGMAKFVESN--EFRELNVGFVMD 195 (439)
Q Consensus 157 ~~~i~~~~~~~EE~g~~~G~~~~~~~~--~~~~~~~~~v~~ 195 (439)
+.++.|+|.+ |. .|+.+++++. ..+.+...+++|
T Consensus 217 ~~t~rFvf~p----g~-iGS~~yl~~~~~~l~~i~a~lnLD 252 (435)
T 3k9t_A 217 KYSYRFLFAP----ET-IGSITWLSRNEDKLKNIKMGLVAT 252 (435)
T ss_dssp SSEEEEEEEC----TT-HHHHHHHHHCGGGGGGEEEEEECC
T ss_pred CceEEEEEcC----cc-HHHHHHHHhChHhhhceEEEEEEE
Confidence 8999999998 22 6777888654 344455566665
No 58
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=94.49 E-value=0.033 Score=55.53 Aligned_cols=79 Identities=18% Similarity=0.210 Sum_probs=62.3
Q ss_pred CChHHHHHHHHHHHhCCCCCccc-----cccCCccHHHHH-HhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHH
Q 013641 352 SNPWWSVFKRAVTSAGGKLGKPE-----ILASTTDARYMR-QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYE 425 (439)
Q Consensus 352 ~~~~~~~l~~a~~~~~~~~~~~~-----~~~~~tD~~~~~-~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~ 425 (439)
|..+...+++++++.+... ... ..+|+|++.+.. +.|+|++.+|.... ..|++.|-+...|+..+++++.
T Consensus 405 ~~~~~~~l~~ia~~~~Ip~-Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~r---yMHS~~E~~~~~D~~~~v~Ll~ 480 (496)
T 3vat_A 405 NAVSEALIREVASSVGVPL-QDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQL---AMHSIRETACTTGVLQTITLFK 480 (496)
T ss_dssp CHHHHHHHHHHHHHHTCCC-EEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEE---STTSSSEEEESHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCE-EEEEecCCCCCcchHHHHHhcccCCcEEEecHhhh---ccccHHHHhhHHHHHHHHHHHH
Confidence 5678999999999876443 221 134677887665 57999999997654 5999999999999999999999
Q ss_pred HHHHHhhcc
Q 013641 426 SVISSLSSF 434 (439)
Q Consensus 426 ~~l~~~~~~ 434 (439)
.++..+.+.
T Consensus 481 af~~~~~~~ 489 (496)
T 3vat_A 481 GFFELFPSL 489 (496)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhHHHH
Confidence 999887654
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=94.31 E-value=0.061 Score=53.18 Aligned_cols=77 Identities=13% Similarity=0.236 Sum_probs=58.4
Q ss_pred CCChHHHHHHHHHHHhCCCCCcc-cc----ccCCcc-HHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHH
Q 013641 351 DSNPWWSVFKRAVTSAGGKLGKP-EI----LASTTD-ARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVY 424 (439)
Q Consensus 351 ~~~~~~~~l~~a~~~~~~~~~~~-~~----~~~~tD-~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~ 424 (439)
.|..+...+++++++.+... .. .. .++||| +.+..+.|+|++-+|.... ..|++.|-+...|+..+++++
T Consensus 368 ~~~~~~~~~~~ia~~~~Ip~-Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP~l---~MHS~~E~~~~~D~~~~~~l~ 443 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQGVIW-QVATLGKVDQGGGGTIAKFFAERGSDVIDMGPALL---GMHSPFEISSKADLFETYVAY 443 (450)
T ss_dssp CCHHHHHHHHHHHHHTTCCE-EECCSSSTTSCCCCCTHHHHHTTTSCEEEEECEEB---STTSSSEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCE-EEEEeccCCCCCCCcHHHHHhCCCCcEEEechhhc---ccchHHHHhhHHHHHHHHHHH
Confidence 35678889999999876432 11 11 334454 5666667999999996654 599999999999999999999
Q ss_pred HHHHHHh
Q 013641 425 ESVISSL 431 (439)
Q Consensus 425 ~~~l~~~ 431 (439)
..++..+
T Consensus 444 ~af~~~l 450 (450)
T 2glf_A 444 RSLMEKL 450 (450)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998753
No 60
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=94.14 E-value=0.049 Score=54.92 Aligned_cols=79 Identities=13% Similarity=0.008 Sum_probs=61.5
Q ss_pred CChHHHHHHHHHHHh------CCCCCccc-----cccCCccHHHHH-HhCCCEEEEccCCCCCCCCCCCCCccchHhHHH
Q 013641 352 SNPWWSVFKRAVTSA------GGKLGKPE-----ILASTTDARYMR-QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLK 419 (439)
Q Consensus 352 ~~~~~~~l~~a~~~~------~~~~~~~~-----~~~~~tD~~~~~-~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~ 419 (439)
|..++..+++++++. +... ... ..+|+|++.++. +.|+|++.+|.... ..|++.|-+...|+..
T Consensus 473 n~~~~~~l~~iA~~~~~~~~~gIP~-Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~r---yMHS~~E~~~~~Dv~~ 548 (571)
T 4eme_A 473 SPLHASLIKRTFELYYNKYKQQIKY-QNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQL---AMHSIREIAAVHDVFF 548 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCCCE-EEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEE---STTSSSEEEEHHHHHH
T ss_pred CHHHHHHHHHHHHhcccccCCCCCE-EEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhh---ccchHHHHhhHHHHHH
Confidence 567899999999987 5332 111 134678877665 67999999996654 5999999999999999
Q ss_pred HHHHHHHHHHHhhcc
Q 013641 420 GVEVYESVISSLSSF 434 (439)
Q Consensus 420 ~~~~~~~~l~~~~~~ 434 (439)
+++++..++..+...
T Consensus 549 ~vkLl~aFl~~~~~~ 563 (571)
T 4eme_A 549 LIKGVFAFYTYYNQV 563 (571)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHH
Confidence 999999999887643
No 61
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=94.00 E-value=0.031 Score=55.46 Aligned_cols=74 Identities=12% Similarity=0.156 Sum_probs=58.1
Q ss_pred CCChHHHHHHHHHHHhCCCCCcccc------ccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHH
Q 013641 351 DSNPWWSVFKRAVTSAGGKLGKPEI------LASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVY 424 (439)
Q Consensus 351 ~~~~~~~~l~~a~~~~~~~~~~~~~------~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~ 424 (439)
.|..+...+++++++.+... .... ..|+|++..+.+.|+|++.+|+... ..|++.|.+...|+...++++
T Consensus 377 ~~~~~~~~l~~~a~~~~Ip~-Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvdiGiP~~---~mHS~~E~~~~~Di~~~~~ll 452 (458)
T 1y7e_A 377 ADAELVSYIRQLLNKNNIAW-QVATLGKVEEGGGGTVAKFLAGYGIRTIDMGPAVI---SMHSPMEITSKFDLYNAYLAY 452 (458)
T ss_dssp -CHHHHHHHHHHHHHHTCCE-EEEEECC-----CHHHHHHHHHHTCEEEEECCEEB---STTSSSEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCe-EEEEeeccCCCCcCcHHHHHhCCCCCEEEEchhhc---ccchHHHHhhHHHHHHHHHHH
Confidence 46778999999999887543 2222 3467777777888999999998765 599999999999999999999
Q ss_pred HHHH
Q 013641 425 ESVI 428 (439)
Q Consensus 425 ~~~l 428 (439)
..++
T Consensus 453 ~af~ 456 (458)
T 1y7e_A 453 KAFY 456 (458)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 8765
No 62
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=92.52 E-value=0.047 Score=53.67 Aligned_cols=75 Identities=11% Similarity=0.129 Sum_probs=59.0
Q ss_pred CChHHHHHHHHHHHhCCCCCcccc----ccCCccHHHH-H-HhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHHH
Q 013641 352 SNPWWSVFKRAVTSAGGKLGKPEI----LASTTDARYM-R-QLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVYE 425 (439)
Q Consensus 352 ~~~~~~~l~~a~~~~~~~~~~~~~----~~~~tD~~~~-~-~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~~ 425 (439)
|..+...+++++++.+... .... .++|||++.+ . +.|+|++.+|+... ..|++.|.+...|+..+++++.
T Consensus 344 ~~~~~~~l~~~a~~~~Ip~-Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdiGip~~---~mHS~~E~~~~~D~~~~~~ll~ 419 (428)
T 2ijz_A 344 NSETAGFFRHLCQDSEVPV-QSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTF---AMHSIRELAGSHDLAHLVKVLG 419 (428)
T ss_dssp CHHHHTTTTHHHHHTCCCC-CBCCCCSSCCCCCCCSTTTGGGGSCCEEEECCCCC---SCSSSSCCCCSSHHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHcCCCe-EEEEEeCCCCccchHHHHHHhCCCCCEEEEchhhc---ccchHHHHhhHHHHHHHHHHHH
Confidence 5678889999999876543 2222 4577886544 3 67999999998765 5999999999999999999999
Q ss_pred HHHHH
Q 013641 426 SVISS 430 (439)
Q Consensus 426 ~~l~~ 430 (439)
.++..
T Consensus 420 af~~~ 424 (428)
T 2ijz_A 420 AFYAS 424 (428)
T ss_dssp HHTTC
T ss_pred HHHhc
Confidence 88764
No 63
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=91.94 E-value=0.71 Score=42.55 Aligned_cols=82 Identities=20% Similarity=0.150 Sum_probs=55.8
Q ss_pred ChHHHHHHHHHHHhCCCCCcccc-ccCCccHHHHHHhCCCEEEEccCCC------------------CCCCCCCCCCc--
Q 013641 353 NPWWSVFKRAVTSAGGKLGKPEI-LASTTDARYMRQLGIPVLGFSPMAN------------------TPILLHDHNEF-- 411 (439)
Q Consensus 353 ~~~~~~l~~a~~~~~~~~~~~~~-~~~~tD~~~~~~~gip~v~~Gp~~~------------------~~~~~H~~nE~-- 411 (439)
..+.+.+.+.+++.+... .... ..+++|..-|.+.|+|++.+..... .....|++...
T Consensus 176 ~~l~~~~~~~~~~~gi~~-~~~~~~~~~sD~~~f~~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~ 254 (284)
T 1tkj_A 176 PVIEKTFKNYFAGLNVPT-EIETEGDGRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLS 254 (284)
T ss_dssp HHHHHHHHHHHHHHTCCC-EECCSSTTCSTHHHHHHTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTT
T ss_pred HHHHHHHHHHHHHcCCCc-ccCCCCCCCCchHHHHHCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChh
Confidence 346667777776655332 2111 2357898766678999997764410 01368999866
Q ss_pred -cchHhHHHHHHHHHHHHHHhhccc
Q 013641 412 -LKDTVFLKGVEVYESVISSLSSFV 435 (439)
Q Consensus 412 -i~~~~l~~~~~~~~~~l~~~~~~~ 435 (439)
++.+++...+++++.++..++...
T Consensus 255 ~id~~~l~~~~~~~~~~~~~la~~~ 279 (284)
T 1tkj_A 255 NINDTALDRNSDAAAHAIWTLSSGT 279 (284)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred hCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987643
No 64
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=91.08 E-value=0.094 Score=52.04 Aligned_cols=74 Identities=11% Similarity=0.132 Sum_probs=57.9
Q ss_pred CCChHHHHHHHHHHHhCCCCCcc------ccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCccchHhHHHHHHHH
Q 013641 351 DSNPWWSVFKRAVTSAGGKLGKP------EILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEFLKDTVFLKGVEVY 424 (439)
Q Consensus 351 ~~~~~~~~l~~a~~~~~~~~~~~------~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~i~~~~l~~~~~~~ 424 (439)
.|..+...+++++++.+... .. ....|+|.+..+.+.|+|++-+|+... ..|++.|.+...|+..+++++
T Consensus 380 ~~~~~~~~l~~ia~~~~Ip~-Q~~~~gr~d~~~GgTig~~~a~~Gi~tvdiGiP~l---~MHS~~E~~~~~Di~~~~~l~ 455 (461)
T 2glj_A 380 ANPEYIAELRRILSKESVNW-QTAELGKVDQGGGGTIAYILAEYGMQVIDCGVALL---NMHAPWEISSKADIYETKNGY 455 (461)
T ss_dssp CCHHHHHHHHHHHHHTCCCE-EECCSSSSSSSCCCCTHHHHHTTTCBCCBBCCEEE---STTSSSEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCe-EEEeeeccCCCCcccHHHHHhCCCCCEEEEchhhc---ccchHHHHhhHHHHHHHHHHH
Confidence 36678899999999876442 22 113467777777888999999997765 599999999999999999998
Q ss_pred HHHH
Q 013641 425 ESVI 428 (439)
Q Consensus 425 ~~~l 428 (439)
..++
T Consensus 456 ~af~ 459 (461)
T 2glj_A 456 SAFL 459 (461)
T ss_dssp HTTS
T ss_pred HHHH
Confidence 7654
No 65
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=89.62 E-value=1.2 Score=46.50 Aligned_cols=47 Identities=9% Similarity=0.082 Sum_probs=40.4
Q ss_pred CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCc-eEEEE
Q 013641 26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQ-FKTLE 72 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~-~~~~~ 72 (439)
.+.+.+.+.|+.|.++|-.+++.++.++++|+++.++++|++ ++..+
T Consensus 22 ~~~~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~~~ 69 (707)
T 3fed_A 22 MKAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKLVH 69 (707)
T ss_dssp CCHHHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeEEe
Confidence 456789999999999999886677899999999999999998 66554
No 66
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=88.84 E-value=0.37 Score=47.70 Aligned_cols=62 Identities=15% Similarity=0.178 Sum_probs=48.6
Q ss_pred cccCCccHHHHHHhCCCEEEEccCCCC-CCCCCCC---CCccchHhHHHHHHHHHHHHHHhhcccC
Q 013641 375 ILASTTDARYMRQLGIPVLGFSPMANT-PILLHDH---NEFLKDTVFLKGVEVYESVISSLSSFVE 436 (439)
Q Consensus 375 ~~~~~tD~~~~~~~gip~v~~Gp~~~~-~~~~H~~---nE~i~~~~l~~~~~~~~~~l~~~~~~~~ 436 (439)
...++||..-|.+.|+|++.+...... ..+.|++ -++++.+.+...+++++.++..++...+
T Consensus 370 ~~~~~SD~~~f~~~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~ 435 (444)
T 3iib_A 370 KASGGPDVSMLPALGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKV 435 (444)
T ss_dssp CCCCCGGGTTSGGGTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCccHHHHHCCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 345789987677789999977654321 2368998 4889999999999999999999987654
No 67
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=88.81 E-value=0.28 Score=48.67 Aligned_cols=46 Identities=26% Similarity=0.375 Sum_probs=36.2
Q ss_pred CEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCH
Q 013641 124 GQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGM 176 (439)
Q Consensus 124 g~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~ 176 (439)
+.|.|++- |++.+++++|.|++.++ .+..+++++++..||.|+ .|+
T Consensus 253 ~~I~s~~l-Ddr~~~~~~l~al~~~~-----~~~~~~~~~~~d~EEVGs-~ga 298 (461)
T 2glj_A 253 SMVMGYGQ-DDRICAYTSFEAMLEMK-----NAKKTCITILVDKEEVGS-IGA 298 (461)
T ss_dssp CEEEETTH-HHHHHHHHHHHHHHTCC-----SCSSCEEEEEECCGGGTC-CTT
T ss_pred CEEEEecc-hhHHHHHHHHHHHHhhc-----cCCCeEEEEEEccCCCCC-ccc
Confidence 45666654 99999999999987654 356799999999999987 544
No 68
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=88.33 E-value=0.14 Score=50.78 Aligned_cols=49 Identities=35% Similarity=0.393 Sum_probs=35.3
Q ss_pred CCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHH
Q 013641 123 TGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMA 177 (439)
Q Consensus 123 dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~ 177 (439)
++.|.+++- |++.+++++|.|++.++ + .++.+++++++..||.|+ .|+.
T Consensus 246 ~~~I~s~~l-Ddr~~~~~~l~al~~~~-~---~~~~~~~~~~~d~EEVGs-~ga~ 294 (458)
T 1y7e_A 246 KALIGAYGQ-DDKICVFTSLESIFDLE-E---TPNKTAICFLVDKEEIGS-TGST 294 (458)
T ss_dssp TCEEEESSH-HHHHHHHHHHHHHSSSS-C---CCSSCEECCCBCSTTC-------
T ss_pred CCeEEEecC-ccHHHHHHHHHHHHhhh-c---cCCceEEEEEEcccccCc-ccch
Confidence 356666665 99999999999988765 3 467899999999999997 5543
No 69
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=86.59 E-value=0.76 Score=45.33 Aligned_cols=77 Identities=17% Similarity=0.057 Sum_probs=51.1
Q ss_pred CCchhHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceE----------EEEecCCccEEEEEEcCCCCCCCcEE
Q 013641 26 HEEREPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFK----------TLEFVPNKPILLLTWPGSDPSLPSIL 95 (439)
Q Consensus 26 ~~~~~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~----------~~~~~~~~~nvi~~~~g~~~~~~~vl 95 (439)
...+++.+..++|+++=+.| +-+..+.+++++.|++.||.-- ....+....|||+...|..++.+.++
T Consensus 11 ~~~~~~~~~~~~~~~Fl~~s--~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~i 88 (450)
T 2glf_A 11 RKKEEIEAFSKEYMEFMSKA--KTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNL 88 (450)
T ss_dssp SCHHHHHHHHHHHHHHHHHC--SSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEE
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEE
Confidence 34445555555566655554 4568899999999999998531 11111123689998877532347899
Q ss_pred Eeeeccccc
Q 013641 96 FNSHLDSVP 104 (439)
Q Consensus 96 l~aH~Dtvp 104 (439)
+.||+|.+.
T Consensus 89 i~AH~Dsp~ 97 (450)
T 2glf_A 89 VVAHIDSPR 97 (450)
T ss_dssp EEEECCCCE
T ss_pred EEEecccCC
Confidence 999999873
No 70
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=84.59 E-value=9 Score=37.93 Aligned_cols=121 Identities=10% Similarity=0.086 Sum_probs=70.9
Q ss_pred HHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhc-CCceEEEEec----CCc-------------c-EEEEEEcCCCCCC
Q 013641 31 PITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSI-GLQFKTLEFV----PNK-------------P-ILLLTWPGSDPSL 91 (439)
Q Consensus 31 ~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~-G~~~~~~~~~----~~~-------------~-nvi~~~~g~~~~~ 91 (439)
-+.+-++|++.|.-- -.-...+++.++.++++ |+++++.+.. .+. | -|+.+|.|.++..
T Consensus 182 ~~~~aRdL~n~P~n~--~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 259 (497)
T 3h8g_F 182 GMAFTRDLGNLPPNL--CHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKAD 259 (497)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTTS
T ss_pred HHHHHHHhhcCCccc--cCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCCC
Confidence 466788888888753 23357788888999998 9998876532 111 1 2344454433233
Q ss_pred CcEEEeee---cccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCc
Q 013641 92 PSILFNSH---LDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDE 168 (439)
Q Consensus 92 ~~vll~aH---~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~E 168 (439)
++|.|.|- +||=-.. -.|=.. .. +=--|++|.|+.+.+++++. +.+ ++.+|+.++...|
T Consensus 260 ~~i~LVGKGiTFDsGG~s-----lKp~~~-M~---------~Mk~DM~GAAaV~g~~~a~a-~l~--l~vnv~~~i~~~E 321 (497)
T 3h8g_F 260 KPFVLVGKGITFDTGGIS-----LKPGAG-MD---------EMKYDMCGAASVFGTLRAVL-ELQ--LPVNLVCLLACAE 321 (497)
T ss_dssp CCEEEEEEEEEEECCTTS-----CCCSTT-GG---------GGGGTTHHHHHHHHHHHHHH-HHT--CSSEEEEEEEEEE
T ss_pred CcEEEEcCceEeccCCcc-----CCCccc-hh---------hccccchHHHHHHHHHHHHH-HcC--CCeEEEEEEEeec
Confidence 44554442 2221110 000000 00 00023588899999999999 776 5689999999888
Q ss_pred ccC
Q 013641 169 EIG 171 (439)
Q Consensus 169 E~g 171 (439)
-.-
T Consensus 322 Nm~ 324 (497)
T 3h8g_F 322 NMP 324 (497)
T ss_dssp ECC
T ss_pred cCC
Confidence 653
No 71
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=84.37 E-value=4.4 Score=37.70 Aligned_cols=76 Identities=16% Similarity=0.069 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhCCCC-Ccccc-ccCCccHHHHHH-hCCCEEEEccCC-----CCCCCCCCCC---CccchHhHHHHHHH
Q 013641 355 WWSVFKRAVTSAGGKL-GKPEI-LASTTDARYMRQ-LGIPVLGFSPMA-----NTPILLHDHN---EFLKDTVFLKGVEV 423 (439)
Q Consensus 355 ~~~~l~~a~~~~~~~~-~~~~~-~~~~tD~~~~~~-~gip~v~~Gp~~-----~~~~~~H~~n---E~i~~~~l~~~~~~ 423 (439)
+++.+.+..+.++... -.... ....+|..-|.+ .|||++.+.+.. .-....|+++ |.++.+.+....++
T Consensus 222 l~~~~~~~a~~~g~~~~f~~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~ 301 (309)
T 3tc8_A 222 IVEMVWSAARDLGYGKYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQT 301 (309)
T ss_dssp HHHHHHHHHHHHTCTTTEEEEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcceeccCCCCCCCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHH
Confidence 5566666666654321 01111 113688776666 799999765531 1124799999 99999999999999
Q ss_pred HHHHHHH
Q 013641 424 YESVISS 430 (439)
Q Consensus 424 ~~~~l~~ 430 (439)
+..++++
T Consensus 302 ~~~~vy~ 308 (309)
T 3tc8_A 302 VLEVIYN 308 (309)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999875
No 72
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=83.41 E-value=2.4 Score=39.24 Aligned_cols=83 Identities=10% Similarity=-0.051 Sum_probs=52.1
Q ss_pred ChHHHHHHHHHHHhCCCC-Ccccc-ccCCccHHHHHHhCCCEEEEccCC--CCCCCCCCCCCccchHhH-----HHHHHH
Q 013641 353 NPWWSVFKRAVTSAGGKL-GKPEI-LASTTDARYMRQLGIPVLGFSPMA--NTPILLHDHNEFLKDTVF-----LKGVEV 423 (439)
Q Consensus 353 ~~~~~~l~~a~~~~~~~~-~~~~~-~~~~tD~~~~~~~gip~v~~Gp~~--~~~~~~H~~nE~i~~~~l-----~~~~~~ 423 (439)
..+.+.+.+..++..... ..... ..++||..-|.+.|+|++.+.... ......|++.+.++..+. ...+++
T Consensus 199 ~~l~~~l~~~a~~~~~~i~~~~~~~~~~~sD~~~f~~~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l 278 (299)
T 1rtq_A 199 SNFTQYLTQLMDEYLPSLTYGFDTCGYACSDHASWHNAGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQL 278 (299)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEECCSSCCSTHHHHHHTTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCccCCcccCCCCCCCCcHHHHHHCCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHH
Confidence 346667777776653221 01111 226799876677899998543210 011369999987766554 788899
Q ss_pred HHHHHHHhhccc
Q 013641 424 YESVISSLSSFV 435 (439)
Q Consensus 424 ~~~~l~~~~~~~ 435 (439)
+..++.+++..+
T Consensus 279 ~~~~~~~La~~~ 290 (299)
T 1rtq_A 279 GLAYAIEMGSAT 290 (299)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHhCCC
Confidence 999999887543
No 73
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=83.11 E-value=5.2 Score=38.93 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=50.8
Q ss_pred HHHHHHhCCCCCccccccCCccHHHHHHhCCCEEEEccCCCCCCCCCCCCCc---cchHhHHHHHHHHHHHHHHhhccc
Q 013641 360 KRAVTSAGGKLGKPEILASTTDARYMRQLGIPVLGFSPMANTPILLHDHNEF---LKDTVFLKGVEVYESVISSLSSFV 435 (439)
Q Consensus 360 ~~a~~~~~~~~~~~~~~~~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~nE~---i~~~~l~~~~~~~~~~l~~~~~~~ 435 (439)
.+..++.+.. .+....++||..-|.+.|||++.|..... ....|++... ++.+.+...+++++.++..++...
T Consensus 328 ~~~~~~~~~~--~~~~~~~~SD~~~F~~~GIP~~~~~~~~~-~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~ 403 (421)
T 2ek8_A 328 AAASSRLSGV--LPYGQEGRSDHESFHALGIPAALFIHAPV-EPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPG 403 (421)
T ss_dssp HHHHHHHTSC--CCEEECCSSTHHHHHTTTCCEEEEEEESC-CTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHhcCCC--CCCCCCCCCccHHHHHCCCCEEEEECCcC-CCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 3444554322 23334578997666678999997752211 1268999876 899999999999999999987543
No 74
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=82.49 E-value=9.6 Score=37.59 Aligned_cols=121 Identities=8% Similarity=-0.031 Sum_probs=69.9
Q ss_pred HHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhc-CCceEEEEec-----------------CCcc-EEEEEEcCCCCCC
Q 013641 31 PITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSI-GLQFKTLEFV-----------------PNKP-ILLLTWPGSDPSL 91 (439)
Q Consensus 31 ~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~-G~~~~~~~~~-----------------~~~~-nvi~~~~g~~~~~ 91 (439)
-+.+-++|++.|.-- -.-...+++.++.++++ |+++++.+.. ...| -|+.+|.|.++..
T Consensus 166 ~~~~aRdL~n~P~n~--~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 243 (486)
T 3pei_A 166 GQNYAKDLQNLPANI--CTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEGD 243 (486)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTTS
T ss_pred HHHHHHHHhcCChhh--cCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCCC
Confidence 467888999988853 23357788888888888 8998876532 0112 2444454433334
Q ss_pred CcEEEeee---cccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCc
Q 013641 92 PSILFNSH---LDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDE 168 (439)
Q Consensus 92 ~~vll~aH---~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~E 168 (439)
++|.|.|- +||=-.. -.|=. + +. +=--|++|.|+.+.+++++. +.+ ++.+|+.++...|
T Consensus 244 ~~i~LVGKGiTFDsGG~s-----lKp~~-------~-M~--~Mk~DM~GAAaVlg~~~a~a-~l~--l~vnv~~~i~~~E 305 (486)
T 3pei_A 244 APIVLVGKGLVFDNGGIC-----IKQAA-------G-MD--SMKMDMGGVAAVMGTMKAIA-MLN--LPVNVVGVMGLAE 305 (486)
T ss_dssp CCEEEEEEEEETEECC---------------------------EECSHHHHHHHHHHHHHH-HHT--CSSEEEEEEEEEE
T ss_pred CcEEEEccceEEecCCcc-----cCCcc-------c-hh--hhhccchHHHHHHHHHHHHH-HcC--CCcEEEEEEEeec
Confidence 55555443 2221110 00000 0 00 00023688899999999999 776 5689999998888
Q ss_pred ccC
Q 013641 169 EIG 171 (439)
Q Consensus 169 E~g 171 (439)
-.-
T Consensus 306 Nm~ 308 (486)
T 3pei_A 306 NAV 308 (486)
T ss_dssp C--
T ss_pred cCC
Confidence 643
No 75
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=82.18 E-value=0.45 Score=46.69 Aligned_cols=46 Identities=17% Similarity=0.063 Sum_probs=35.1
Q ss_pred EEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCcccCHHH
Q 013641 125 QIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGGFDGMAK 178 (439)
Q Consensus 125 ~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~~~G~~~ 178 (439)
.|.|++ -|++.+++++|.|++.++ +...++.++| ..||.|+ .|+.-
T Consensus 228 ~I~s~~-lDdr~~~~~~l~al~~~~-----~~~~~v~~~f-d~EEVGs-~ga~g 273 (428)
T 2ijz_A 228 FIAGAR-LDNLLSCHAGLEALLNAE-----GDENCILVCT-DHEEVGS-CSHCG 273 (428)
T ss_dssp SSSCCC-SSCSSTTTTTTTHHHHTT-----SCSSSCEEEE-CBSCTTT-TCHHH
T ss_pred eEEeec-CccHHHHHHHHHHHHhcc-----cCCceEEEEE-eccccCc-cchhh
Confidence 344444 499999999999988764 3557888888 8999998 77654
No 76
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=81.12 E-value=6.4 Score=38.92 Aligned_cols=127 Identities=8% Similarity=-0.037 Sum_probs=70.1
Q ss_pred hHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecC----CccEEEEEEcCCCCCCCcEEEeeecccccC
Q 013641 30 EPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVP----NKPILLLTWPGSDPSLPSILFNSHLDSVPA 105 (439)
Q Consensus 30 ~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~----~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~ 105 (439)
+-+.+-++|++.|.-- -.-...+++.++.++++|++++..+... +.+.+++.=+|+. .|+.++.-+|- |.
T Consensus 205 ~~~~laRdLvn~P~N~--~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~--~pPrli~L~Y~--g~ 278 (522)
T 4efd_A 205 TSTQLCQRLVDAPPNL--LTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAF--EAPRLVTLLYT--PK 278 (522)
T ss_dssp HHHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSS--SCCEEEEEEEC--CS
T ss_pred HHHHHHHHHhcCCchh--CCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCC--CCCEEEEEEEC--CC
Confidence 4578899999999853 2335778888888999999998776321 2222332222322 12222222221 11
Q ss_pred CCCCCCCCCCceeEeCCCCEEEecCc------------ccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccC
Q 013641 106 EPDKWSHPPFSAFHSPETGQIFARGS------------QDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIG 171 (439)
Q Consensus 106 ~~~~w~~~Pf~~~~~~~dg~i~GrG~------------~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g 171 (439)
++ . .+|..++ - -|.-|=-|- --|++|.|+.+.+++++. +.+ ++.+|..++...|-.-
T Consensus 279 ~~--~-~~~iaLV-G--KGITFDSGGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a-~l~--lpvnV~~vl~~~ENm~ 347 (522)
T 4efd_A 279 GT--P-VKKVSLV-G--KGIVYDCGGLALKPADYMKLMKHDMGGAAAVFCGFLTAV-RLQ--QPVQLSCTLCLAENAI 347 (522)
T ss_dssp SC--C-SEEEEEE-E--EEEETCCCCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHH-HHT--CSEEEEEEEEEEECCC
T ss_pred CC--C-CCcEEEe-c--CceEeecCCccCCCccchhhcccccchHHHHHHHHHHHH-HcC--CCceEEEEEEEeccCC
Confidence 10 0 0011100 0 111111111 022577888999999998 765 6789999999888653
No 77
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=79.91 E-value=18 Score=36.02 Aligned_cols=117 Identities=15% Similarity=0.096 Sum_probs=68.9
Q ss_pred HHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcC--CceEEEEec----CCcc--------------EEEEEEcCCCC-C
Q 013641 32 ITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIG--LQFKTLEFV----PNKP--------------ILLLTWPGSDP-S 90 (439)
Q Consensus 32 i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G--~~~~~~~~~----~~~~--------------nvi~~~~g~~~-~ 90 (439)
+.+-++|++.|.--. .=...+++.++.++++| +++++.+.. .+.+ -|+.+|.|..+ .
T Consensus 184 ~~laRdL~n~P~N~~--tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~~~ 261 (503)
T 1gyt_A 184 IKAAKDLGNMPPNIC--NAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASED 261 (503)
T ss_dssp HHHHHHHHHSCTTTC--SHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCCTT
T ss_pred HHHHHHHhcCChhhc--CHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCCCC
Confidence 466788888887532 23477888888889999 988876532 1112 23444444321 1
Q ss_pred CCcEEEeee---cccccCCCCCCCCCCCceeEeCCCCEEEecCccc---chhHHHHHHHHHHHHHHhcCCCCCeeEEEEE
Q 013641 91 LPSILFNSH---LDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQD---DKCIAIQYIEAIRNLILVKNFKPIRTVHASY 164 (439)
Q Consensus 91 ~~~vll~aH---~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D---~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~ 164 (439)
.++|.|.|= +||=-.. -.| +.|-.+ |++|.|+.+.+++++. +.+ ++.+|+.++
T Consensus 262 ~~~i~LVGKGITFDsGGis-----lKp-------------~~~M~~MK~DM~GAAaVlg~~~aia-~l~--l~vnV~~~i 320 (503)
T 1gyt_A 262 ARPIVLVGKGLTFDSGGIS-----IKP-------------SEGMDEMKYDMCGAAAVYGVMRMVA-ELQ--LPINVIGVL 320 (503)
T ss_dssp CCCEEEEEEEEEEECCTTS-----CCC-------------STTGGGGGGGGHHHHHHHHHHHHHH-HHT--CSSEEEEEE
T ss_pred CCcEEEEcCceEecCCCcc-----ccC-------------CcChhhcccccchHHHHHHHHHHHH-HcC--CCeeEEEEE
Confidence 244444432 2221100 000 001112 2578899999999999 776 568999999
Q ss_pred ecCcccC
Q 013641 165 VPDEEIG 171 (439)
Q Consensus 165 ~~~EE~g 171 (439)
...|-.-
T Consensus 321 ~~~ENm~ 327 (503)
T 1gyt_A 321 AGCENMP 327 (503)
T ss_dssp EEEEECC
T ss_pred EeeccCC
Confidence 9888654
No 78
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=79.43 E-value=14 Score=36.64 Aligned_cols=111 Identities=11% Similarity=0.125 Sum_probs=68.4
Q ss_pred HHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEec----CCccE--------------EEEEEcCCCCCCCc
Q 013641 32 ITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFV----PNKPI--------------LLLTWPGSDPSLPS 93 (439)
Q Consensus 32 i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~----~~~~n--------------vi~~~~g~~~~~~~ 93 (439)
+.+-++|++.|.-- -.-...+++.++.+++.|+++++.+.. .+.+. |+.+|.|.++..++
T Consensus 200 ~~~aRdL~n~P~n~--ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~ 277 (515)
T 3kzw_A 200 INLARDFSNMPPNV--LTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEAP 277 (515)
T ss_dssp HHHHHHHHHSCTTT--SCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSCCC
T ss_pred HHHHHHHhcCCccc--cCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCCCc
Confidence 55888999988853 233467778888888899998876532 12222 33334333222334
Q ss_pred EEEeeecccccCCCCCCCCCCCceeEeCCCCEEEecCc---------c---cchhHHHHHHHHHHHHHHhcCCCCCeeEE
Q 013641 94 ILFNSHLDSVPAEPDKWSHPPFSAFHSPETGQIFARGS---------Q---DDKCIAIQYIEAIRNLILVKNFKPIRTVH 161 (439)
Q Consensus 94 vll~aH~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~---------~---D~k~~~aa~l~a~~~l~~~~~~~~~~~i~ 161 (439)
|.|.|= |.-|=-|- . -|++|.|+.+.+++++. +.+ ++.+|+
T Consensus 278 i~LVGK------------------------GiTFDsGG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a-~l~--lpvnv~ 330 (515)
T 3kzw_A 278 IALVGK------------------------GITYDSGGYSIKTKNGMATMKFDMCGAANVVGIIEAAS-RLQ--LPVNIV 330 (515)
T ss_dssp EEEEEE------------------------EEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHH-HTT--CSCEEE
T ss_pred EEEecC------------------------ceEEecCCcCCCCccChhhchhchHHHHHHHHHHHHHH-HcC--CCceEE
Confidence 444332 22221121 1 23588899999999999 775 668999
Q ss_pred EEEecCcccC
Q 013641 162 ASYVPDEEIG 171 (439)
Q Consensus 162 ~~~~~~EE~g 171 (439)
.++...|-.-
T Consensus 331 ~~i~~~ENm~ 340 (515)
T 3kzw_A 331 GVLACAENMI 340 (515)
T ss_dssp EEEEEEEECC
T ss_pred EEEEeeccCC
Confidence 9998888653
No 79
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=79.22 E-value=3.5 Score=38.38 Aligned_cols=56 Identities=14% Similarity=0.084 Sum_probs=43.4
Q ss_pred CCccHHHHHHhCCCEEEEccCCCCCCCCCCCC---CccchHhHHHHHHHHHHHHHHhhcc
Q 013641 378 STTDARYMRQLGIPVLGFSPMANTPILLHDHN---EFLKDTVFLKGVEVYESVISSLSSF 434 (439)
Q Consensus 378 ~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~n---E~i~~~~l~~~~~~~~~~l~~~~~~ 434 (439)
..+|..-|.+.|||++.|...... ...|+++ |+++.+.+....+++..++.++...
T Consensus 242 ~~SDH~pF~~~GIP~l~~~~~~~~-~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~ 300 (312)
T 4f9u_A 242 VDDDHRPFLDENVPVLHLVATPFP-DVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKR 300 (312)
T ss_dssp CCCTTHHHHTTTCCEEEEECSSCC-TTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHCCCCEEEEECCCCC-CCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhC
Confidence 357876566679999977655432 3579987 8899999999999999999887644
No 80
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=78.97 E-value=23 Score=34.88 Aligned_cols=120 Identities=13% Similarity=0.028 Sum_probs=68.5
Q ss_pred HHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecC----CccE--------------EEEEEcCCCCCCC
Q 013641 31 PITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVP----NKPI--------------LLLTWPGSDPSLP 92 (439)
Q Consensus 31 ~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~----~~~n--------------vi~~~~g~~~~~~ 92 (439)
-+.+.++|++.|.--. .-...+++.++.++++|++++..+... +.+. |+.+|.|.+. .+
T Consensus 169 ~~~~aR~L~n~P~n~~--tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~-~~ 245 (491)
T 2hc9_A 169 SVRETARLIDTPANIL--TTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGS-TE 245 (491)
T ss_dssp HHHHHHHHHHSCTTTS--CHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTC-SC
T ss_pred HHHHHHHHhcCCchhC--CHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCC-CC
Confidence 3567788888777532 235788888888999999998775321 1222 3333433221 23
Q ss_pred cEEEeee---cccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcc
Q 013641 93 SILFNSH---LDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEE 169 (439)
Q Consensus 93 ~vll~aH---~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE 169 (439)
+|.|.|- +||=-.. -.|-.. .. +=--|++|.|+.+.+++++. +.+ ++.+|..++...|-
T Consensus 246 ~i~LVGKGiTFDsGG~s-----lKp~~~-M~---------~Mk~DM~GAAaVlg~~~a~a-~l~--l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 246 HIALVGKGVVYDTGGLQ-----IKTKTG-MP---------NMKRDMGGAAGMLEAYSALV-KHG--FSQTLHACLCIVEN 307 (491)
T ss_dssp EEEEEEEEEEEECCTTS-----CCCTTT-ST---------TGGGGGHHHHHHHHHHHHHH-TTT--CCSEEEEEEEEEEE
T ss_pred cEEEEcCceEecCCCcc-----CCCCcC-hh---------hccccccHHHHHHHHHHHHH-HcC--CCceEEEEEEeeec
Confidence 4444332 1221100 000000 00 00122588899999999998 665 67899999998886
Q ss_pred cC
Q 013641 170 IG 171 (439)
Q Consensus 170 ~g 171 (439)
.-
T Consensus 308 m~ 309 (491)
T 2hc9_A 308 NV 309 (491)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 81
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=77.94 E-value=20 Score=35.38 Aligned_cols=128 Identities=13% Similarity=0.048 Sum_probs=68.8
Q ss_pred HHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcC--CceEEEEec----CCccEEEEEEcCCCCCCCcEEEeeeccccc
Q 013641 31 PITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIG--LQFKTLEFV----PNKPILLLTWPGSDPSLPSILFNSHLDSVP 104 (439)
Q Consensus 31 ~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G--~~~~~~~~~----~~~~nvi~~~~g~~~~~~~vll~aH~Dtvp 104 (439)
-+.+-++|++.|.--. .=...+++.++.++++| +++++.+.. .+.+.+++.=+|+. .|+.++.-+|- |
T Consensus 163 ~~~laRdLvn~P~N~~--tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~--~pPrli~l~y~--g 236 (484)
T 1lam_A 163 GQNLARRLMETPANEM--TPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSE--EPPVFLEIHYK--G 236 (484)
T ss_dssp HHHHHHHHHHSCTTTS--CHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSS--SCCEEEEEEEE--C
T ss_pred HHHHHHHhhCCChhhc--CHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCC--CCCeEEEEEEC--C
Confidence 3577888999888532 23577888888889999 888876532 12222222222322 12222221221 1
Q ss_pred CCCCCCCCCCCceeEeCCCCEEEecC---------ccc---chhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccCc
Q 013641 105 AEPDKWSHPPFSAFHSPETGQIFARG---------SQD---DKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIGG 172 (439)
Q Consensus 105 ~~~~~w~~~Pf~~~~~~~dg~i~GrG---------~~D---~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g~ 172 (439)
... .+ ..|...+ - -|.-|=-| -.+ |++|.|+.+.+++++. +.+ ++.+|+.++...|-.-+
T Consensus 237 ~~~-~~-~~~i~LV-G--KGITFDsGG~slKp~~~M~~MK~DMgGAAaVlg~~~aia-~l~--l~vnv~~~i~~~ENm~s 308 (484)
T 1lam_A 237 SPN-AS-EPPLVFV-G--KGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAA-KLD--LPINIVGLAPLCENMPS 308 (484)
T ss_dssp SSS-TT-SCCEEEE-E--CEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHH-HTT--CSSEEEEEEEEEEECCS
T ss_pred CCC-CC-CCcEEEE-e--cceEEcCCCcCCcCccchhhhhccchHHHHHHHHHHHHH-HcC--CCeeEEEEEEeeccCCC
Confidence 110 00 1121111 0 12222111 112 2578899999999999 775 66899999998886543
No 82
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=77.07 E-value=19 Score=35.48 Aligned_cols=120 Identities=9% Similarity=0.034 Sum_probs=69.3
Q ss_pred HHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhc-CCceEEEEec----CCcc--------------EEEEEEcCCCCCC
Q 013641 31 PITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSI-GLQFKTLEFV----PNKP--------------ILLLTWPGSDPSL 91 (439)
Q Consensus 31 ~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~-G~~~~~~~~~----~~~~--------------nvi~~~~g~~~~~ 91 (439)
-+.+-++|++.|.-- -.-...+++.++.++++ |+++++.+.. .+.+ -|+.+|.|.. ..
T Consensus 178 ~~~~aRdL~n~P~n~--~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~-~~ 254 (490)
T 3jru_B 178 GVEFARELGNLPPNY--CTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGG-DA 254 (490)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTT-TS
T ss_pred HHHHHHHhhcCCccc--cCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCC-CC
Confidence 467888999988753 23356778888888887 8988876532 1112 2334444433 23
Q ss_pred CcEEEeee---cccccCCCCCCCCCCCceeEeCCCCEEEecCcccchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCc
Q 013641 92 PSILFNSH---LDSVPAEPDKWSHPPFSAFHSPETGQIFARGSQDDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDE 168 (439)
Q Consensus 92 ~~vll~aH---~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~~D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~E 168 (439)
++|.|.|- +|+=-.. -.|-.. .. +=--|++|.|+.+.+++++. +.+ ++.+|+.++...|
T Consensus 255 ~~i~LVGKGiTFDsGG~s-----lKp~~~-M~---------~Mk~DM~GAAaV~g~~~a~a-~l~--l~vnv~~~i~~~E 316 (490)
T 3jru_B 255 RPYVLVGKGITFDTGGVN-----LKTQGG-IE---------EMKYDMCGGATVIGTFVATV-KAE--LPINLVVVVPAVE 316 (490)
T ss_dssp CCEEEEECEEEEECCTTS-----CCCSSC-GG---------GGGGGGHHHHHHHHHHHHHH-HTT--CSSEEEEEEEEEE
T ss_pred CcEEEEcCeeEecCCCcc-----CCCccc-Hh---------hCcccchHHHHHHHHHHHHH-HcC--CCcEEEEEEEeec
Confidence 44444332 2221110 000000 00 00123588899999999999 775 6689999998888
Q ss_pred ccC
Q 013641 169 EIG 171 (439)
Q Consensus 169 E~g 171 (439)
-.-
T Consensus 317 Nm~ 319 (490)
T 3jru_B 317 NAI 319 (490)
T ss_dssp ECC
T ss_pred cCC
Confidence 653
No 83
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=75.52 E-value=3.2 Score=41.29 Aligned_cols=46 Identities=20% Similarity=0.220 Sum_probs=32.1
Q ss_pred CEEEecCcccchhHHHHHHHHHHHHHHhcC----CCCCeeEEEEEecCcccCc
Q 013641 124 GQIFARGSQDDKCIAIQYIEAIRNLILVKN----FKPIRTVHASYVPDEEIGG 172 (439)
Q Consensus 124 g~i~GrG~~D~k~~~aa~l~a~~~l~~~~~----~~~~~~i~~~~~~~EE~g~ 172 (439)
+.|.|.+ -|++.++.++|.|++.+. +.. ......+ ++++..||.|+
T Consensus 277 e~I~s~~-lDnr~~~~~~leaL~~~~-~~~~~~~~~~~~~v-~v~~dqEEVGs 326 (496)
T 3vat_A 277 EFIFAPR-LDNLHSCFCALQALIDSC-SAPASLAADPHVRM-IALYDNEEVGS 326 (496)
T ss_dssp CEEEETT-HHHHHHHHHHHHHHHHHT-TSHHHHHHCCSEEE-EEEESCGGGTS
T ss_pred ceEEeec-cccHHHHHHHHHHHHhhh-ccccccccCCCcEE-EEEEccCCcCC
Confidence 3455554 499999999999998875 310 0133455 88899999986
No 84
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=73.83 E-value=6.5 Score=36.93 Aligned_cols=55 Identities=13% Similarity=0.124 Sum_probs=43.7
Q ss_pred CCccHHHHHHhCCCEEEEccCCCCCCCCCCCC---CccchHhHHHHHHHHHHHHHHhhc
Q 013641 378 STTDARYMRQLGIPVLGFSPMANTPILLHDHN---EFLKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 378 ~~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~n---E~i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
..+|..-|.+.|||++.+.+.... ...|+++ |+++.+.+...++++..++.++..
T Consensus 272 ~~SDH~pF~~~GIP~~~~~~~~f~-~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Eyl~ 329 (330)
T 3pb6_X 272 VEDDHIPFLRRGVPVLHLISTPFP-AVWHTPADTEVNLHPPTVHNLCRILAVFLAEYLG 329 (330)
T ss_dssp CSCTTHHHHTTTCCEEEEECSSCC-TTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCchHhHHHCCCCEEEEEcCCCC-CCCCCCcCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 578876666689999977654332 3689987 789999999999999999988764
No 85
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=69.04 E-value=9.5 Score=35.74 Aligned_cols=54 Identities=11% Similarity=0.108 Sum_probs=40.4
Q ss_pred CccHHHHHHhCCCEEEEccCCCCCCCCCCCC---CccchHhHHHHHHHHHHHHHHhhc
Q 013641 379 TTDARYMRQLGIPVLGFSPMANTPILLHDHN---EFLKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 379 ~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~n---E~i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
.+|..-|.+.|||++-|-+... ....|+++ |.++.+.+....+++..++.++.-
T Consensus 268 ~SDH~pF~~~GIP~l~~i~~~~-~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~EyL~ 324 (330)
T 4fai_A 268 EDDHIPFLRRNVPILHLIPVPF-PSVWHTPDDNASVIDYATTDNLALIIRLFALEYLL 324 (330)
T ss_dssp CSTTHHHHTTTCCEEEECCSSC-CTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCchHHHHHCCCCEEEEECCCC-CCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 5787655667999997654432 13689988 778999999999999998877653
No 86
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=68.01 E-value=14 Score=34.43 Aligned_cols=77 Identities=14% Similarity=0.049 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHhCCCCC-cccc-ccCCccHHHHHH-hCCCEEEEccCC------CCCCCCCCCC---CccchHhHHHHH
Q 013641 354 PWWSVFKRAVTSAGGKLG-KPEI-LASTTDARYMRQ-LGIPVLGFSPMA------NTPILLHDHN---EFLKDTVFLKGV 421 (439)
Q Consensus 354 ~~~~~l~~a~~~~~~~~~-~~~~-~~~~tD~~~~~~-~gip~v~~Gp~~------~~~~~~H~~n---E~i~~~~l~~~~ 421 (439)
.+.+.+.+..+.++...- .... ....+|..-|.+ .|||++.|.+.. .-....|+++ |+|+.+.|....
T Consensus 224 ~l~~~~~~~~~~~g~~~~f~~~~~~~~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~ 303 (314)
T 3gux_A 224 SEMKKIWKKAHELGYGKYFVKEDGGETVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVG 303 (314)
T ss_dssp HHHHHHHHHHHHHTCTTTEEEEECCCCCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccccCCCCCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHH
Confidence 456677666666643210 1111 123588766666 799999765541 1113689987 889999999999
Q ss_pred HHHHHHHHH
Q 013641 422 EVYESVISS 430 (439)
Q Consensus 422 ~~~~~~l~~ 430 (439)
+++..++++
T Consensus 304 ~~~~~~~y~ 312 (314)
T 3gux_A 304 QTVMDVIYN 312 (314)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999999875
No 87
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=67.86 E-value=38 Score=33.54 Aligned_cols=119 Identities=14% Similarity=0.026 Sum_probs=69.7
Q ss_pred HHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEec----CCc-------------c-EEEEEEcCCCCCCC
Q 013641 31 PITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFV----PNK-------------P-ILLLTWPGSDPSLP 92 (439)
Q Consensus 31 ~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~----~~~-------------~-nvi~~~~g~~~~~~ 92 (439)
-+.+-++|++.|.-- -.-...++..++.++++|+++++.+.. .+. | -|+.+|.|.+...+
T Consensus 207 ~v~laRdLvn~P~N~--ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~ 284 (528)
T 3kr4_A 207 GTYYASQLIAAPSNY--CNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKK 284 (528)
T ss_dssp HHHHHHHHHHSCTTT--SCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCE
T ss_pred HHHHHHHHhhCCccc--cCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCC
Confidence 477889999998853 233466777778888899998876532 111 1 24444544332234
Q ss_pred cEEEeee---cccccCCCCCCCCCCCceeEeCCCCEEEecCc--cc---chhHHHHHHHHHHHHHHhcCCCCCeeEEEEE
Q 013641 93 SILFNSH---LDSVPAEPDKWSHPPFSAFHSPETGQIFARGS--QD---DKCIAIQYIEAIRNLILVKNFKPIRTVHASY 164 (439)
Q Consensus 93 ~vll~aH---~Dtvp~~~~~w~~~Pf~~~~~~~dg~i~GrG~--~D---~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~ 164 (439)
+|.|.|- +|+=... -.|- .|. .+ |++|.|+.+.+++++. +.+ ..+.+|..++
T Consensus 285 ~iaLVGKGITFDsGG~s-----lKp~-------------~g~~M~~MK~DM~GAAaVlg~~~aia-~l~-~~~vnv~~vi 344 (528)
T 3kr4_A 285 KIALVGKGITFDSGGYN-----LKAA-------------PGSMIDLMKFDMSGCAAVLGCAYCVG-TLK-PENVEIHFLS 344 (528)
T ss_dssp EEEEEEEEEEEECCTTS-----CSCS-------------TTCCGGGGGGGGHHHHHHHHHHHHHH-HHC-CSSEEEEEEE
T ss_pred cEEEecCceEeecCCcc-----cCCC-------------CCcCHHHhhcCcchHHHHHHHHHHHH-hcC-CCCceEEEEE
Confidence 5555443 2221110 0000 010 12 2577888999999988 765 2357899988
Q ss_pred ecCcccC
Q 013641 165 VPDEEIG 171 (439)
Q Consensus 165 ~~~EE~g 171 (439)
...|-.-
T Consensus 345 ~~~ENm~ 351 (528)
T 3kr4_A 345 AVCENMV 351 (528)
T ss_dssp EEEEECC
T ss_pred EeeccCC
Confidence 8888654
No 88
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=64.36 E-value=27 Score=32.17 Aligned_cols=77 Identities=14% Similarity=0.060 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHhCCCCCccc--cccCCccHHHHHH-hCCCEEEEccCCC---CCCCCCCCC---CccchHhHHHHHHHH
Q 013641 354 PWWSVFKRAVTSAGGKLGKPE--ILASTTDARYMRQ-LGIPVLGFSPMAN---TPILLHDHN---EFLKDTVFLKGVEVY 424 (439)
Q Consensus 354 ~~~~~l~~a~~~~~~~~~~~~--~~~~~tD~~~~~~-~gip~v~~Gp~~~---~~~~~H~~n---E~i~~~~l~~~~~~~ 424 (439)
.+.+.+.+..+..+.....+. ....++|...|.+ .|||++.|.+... -....|++. |+++.+.|....+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~v 301 (309)
T 4fuu_A 222 DINKKVWKAAKKAGYGKTFIDERGDTITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTV 301 (309)
T ss_dssp HHHHHHHHHHHHTTCTTTEEEEECCCCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcccccccCCCCCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHH
Confidence 455666666665543321111 1223568766654 6999996654321 123689987 778888888888888
Q ss_pred HHHHHH
Q 013641 425 ESVISS 430 (439)
Q Consensus 425 ~~~l~~ 430 (439)
..+|++
T Consensus 302 l~~ly~ 307 (309)
T 4fuu_A 302 LEVIYN 307 (309)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 887764
No 89
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=62.29 E-value=16 Score=34.10 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=41.3
Q ss_pred CccHHHHHHhCCCEEEEccCCCCCCCCCCCC---CccchHhHHHHHHHHHHHHHHhhc
Q 013641 379 TTDARYMRQLGIPVLGFSPMANTPILLHDHN---EFLKDTVFLKGVEVYESVISSLSS 433 (439)
Q Consensus 379 ~tD~~~~~~~gip~v~~Gp~~~~~~~~H~~n---E~i~~~~l~~~~~~~~~~l~~~~~ 433 (439)
.+|..-|.+.|+|++.+...... ...|++. ++++.+.+....+++..++.++.+
T Consensus 272 ~sDh~~F~~~GiP~~~~~~~~~~-~~yHt~~Dt~~~ld~~~l~~~~~~~~~~v~eyl~ 328 (329)
T 2afw_A 272 QDDHIPFLRRGVPVLHLIPSPFP-EVWHTMDDNEENLDESTIDNLNKILQVFVLEYLH 328 (329)
T ss_dssp CSTTHHHHTTTCCEEEECCSSCC-TTTTSTTCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHhHHHCCCCEEEEEcCCCC-CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 47866555569999987765322 3689886 778889999999999999887754
No 90
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=58.45 E-value=33 Score=33.11 Aligned_cols=57 Identities=14% Similarity=0.150 Sum_probs=44.6
Q ss_pred ccCCccHHHHHHhC--CCEEEEccCCCCCCCCCCCC---CccchHhHHHHHHHHHHHHHHhh
Q 013641 376 LASTTDARYMRQLG--IPVLGFSPMANTPILLHDHN---EFLKDTVFLKGVEVYESVISSLS 432 (439)
Q Consensus 376 ~~~~tD~~~~~~~g--ip~v~~Gp~~~~~~~~H~~n---E~i~~~~l~~~~~~~~~~l~~~~ 432 (439)
.+.++|-.-|...| +|++.|.-......-.|++. ++|+.+.|..+.+++.+++..+-
T Consensus 293 ~~~GSDh~qF~spG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le 354 (435)
T 3k9t_A 293 FPWGSDERQFSSPGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIE 354 (435)
T ss_dssp CSCSSTHHHHTSTTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcchhHhhCCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhh
Confidence 34789999898888 99998876432223588877 67888999999999999987764
No 91
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=53.33 E-value=27 Score=34.25 Aligned_cols=125 Identities=12% Similarity=0.101 Sum_probs=73.4
Q ss_pred hHHHHHHhHhcCcCCCCCCCCchHHHHHHHHHHhcCCceEEEEecC---CccEEEEEEcCCCCCCCcEEEeeecccccCC
Q 013641 30 EPITRFKQYLRFNTAHPNPNYTAPVSFLISQAQSIGLQFKTLEFVP---NKPILLLTWPGSDPSLPSILFNSHLDSVPAE 106 (439)
Q Consensus 30 ~~i~~l~~lv~ips~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~---~~~nvi~~~~g~~~~~~~vll~aH~Dtvp~~ 106 (439)
+-+.+-++|++.|.--. .-...+++.++.++++|+++++..... +.+.+++.=+|+. .|+.++.-+| . +.+
T Consensus 168 ~~~~laRdLvn~P~N~~--tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~--~pPrli~l~y-~-~~~ 241 (482)
T 3ij3_A 168 TTIYLIRDLINTPAEDM--GPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGS--RPPLLIDLKW-G-DIK 241 (482)
T ss_dssp HHHHHHHHHHHSCGGGS--SHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSS--SCCEEEEEEE-S-CTT
T ss_pred HHHHHHHHHhcCCcccc--CHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCC--CCCEEEEEEe-C-CCC
Confidence 34778899999998532 335778888888899999988764321 1222333323432 2444443344 1 111
Q ss_pred CCCCCCCCCceeEeCCCCEEEecCcc------------cchhHHHHHHHHHHHHHHhcCCCCCeeEEEEEecCcccC
Q 013641 107 PDKWSHPPFSAFHSPETGQIFARGSQ------------DDKCIAIQYIEAIRNLILVKNFKPIRTVHASYVPDEEIG 171 (439)
Q Consensus 107 ~~~w~~~Pf~~~~~~~dg~i~GrG~~------------D~k~~~aa~l~a~~~l~~~~~~~~~~~i~~~~~~~EE~g 171 (439)
.+|... +- -|.-|=-|-. -|++|.|+.+.+++++. +.+ ++.+|..++...|-.-
T Consensus 242 -----~~~i~L-VG--KGITFDsGGlslKp~~~M~~MK~DMgGAAaVlg~~~aia-~l~--lpvnv~~ii~~~ENm~ 307 (482)
T 3ij3_A 242 -----APKVTL-VG--KGVCFDSGGLDIKTPGGMLLMKKDMGGAAHALGLARMIM-LQQ--LPVRLRLLIPAVENAI 307 (482)
T ss_dssp -----SCEEEE-EE--CEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHH-HTT--CSSEEEEEEEEEEECC
T ss_pred -----CCeEEE-Ec--cceEeecCCccCcCccchhhccccchHHHHHHHHHHHHH-HcC--CCceEEEEEEeeccCC
Confidence 122221 11 2333333221 22578889999999999 775 6689999998888653
No 92
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=31.85 E-value=76 Score=21.93 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=45.0
Q ss_pred CceEEEEeeecCCCCCHHHHHHHHHHHhcc-cCCCceEEEeeccccccCCCCCccccCCCCChHHHHHHHHHHHhCCC
Q 013641 293 SEAEAGFDARLPPTVDPDLIRRRIAEEWAP-AIRNMSYEIIEKGPIRDYKGRPLMTLTDDSNPWWSVFKRAVTSAGGK 369 (439)
Q Consensus 293 ~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~a~~~~~~~ 369 (439)
+--++.+|+|...+..++....++++.++. ...++++.+... . - ..-..+.+.+.+.+.+++.+
T Consensus 15 dgqeieidirvstgkeleralqelekalaragarnvqitisae-------n--d----eqakelleliarllqklgyk 79 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGARNVQITISAE-------N--D----EQAKELLELIARLLQKLGYK 79 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTCSEEEEEEECS-------S--H----HHHHHHHHHHHHHHHHHTCS
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhccccceEEEEEec-------C--h----HHHHHHHHHHHHHHHHhCCC
Confidence 557899999999999999999999888764 345666666631 0 0 01145777777777777654
No 93
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=22.85 E-value=1.5e+02 Score=29.72 Aligned_cols=56 Identities=13% Similarity=0.076 Sum_probs=36.6
Q ss_pred CCCchHHHHHHHHHHhcCCceE----EEE--------ecCCccEEEEEEcCCC--CCCC-cEEEeeecccc
Q 013641 48 PNYTAPVSFLISQAQSIGLQFK----TLE--------FVPNKPILLLTWPGSD--PSLP-SILFNSHLDSV 103 (439)
Q Consensus 48 ~~e~~~~~~l~~~l~~~G~~~~----~~~--------~~~~~~nvi~~~~g~~--~~~~-~vll~aH~Dtv 103 (439)
+-+..+.++++++|++.||.-- .+. ..-+...||+..-|.. ++.. --++.||.|.-
T Consensus 21 pT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP 91 (571)
T 4eme_A 21 GSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSC 91 (571)
T ss_dssp CSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCC
Confidence 3457899999999999998631 011 1112346787766654 2223 56889999985
No 94
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=20.80 E-value=34 Score=35.22 Aligned_cols=42 Identities=7% Similarity=0.010 Sum_probs=33.9
Q ss_pred CchhHHHHHHhHhc---CcCCCCCCCCchHHHHHHHHHHhcCCce
Q 013641 27 EEREPITRFKQYLR---FNTAHPNPNYTAPVSFLISQAQSIGLQF 68 (439)
Q Consensus 27 ~~~~~i~~l~~lv~---ips~s~~~~e~~~~~~l~~~l~~~G~~~ 68 (439)
+.+++.+.|+.|.+ -|-.+++.++.++++||++.|+++|++.
T Consensus 16 ~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 16 DSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp HTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 34578888888888 3556556778999999999999999973
Done!